Query 019049
Match_columns 347
No_of_seqs 145 out of 1722
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 06:15:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019049.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019049hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 3.4E-60 7.4E-65 407.3 30.6 306 1-338 4-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 9.5E-56 2.1E-60 389.9 35.1 321 1-337 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 7.1E-54 1.5E-58 343.5 27.8 325 2-341 10-334 (336)
4 KOG0024 Sorbitol dehydrogenase 100.0 6.9E-51 1.5E-55 338.9 27.0 313 1-338 5-353 (354)
5 COG1062 AdhC Zn-dependent alco 100.0 9.7E-51 2.1E-55 341.1 26.2 309 1-336 3-365 (366)
6 KOG0023 Alcohol dehydrogenase, 100.0 7E-50 1.5E-54 332.1 28.4 310 2-340 11-357 (360)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 4.6E-48 9.9E-53 351.2 33.5 318 1-335 1-371 (371)
8 KOG0022 Alcohol dehydrogenase, 100.0 7.9E-48 1.7E-52 318.2 26.9 313 1-336 8-374 (375)
9 cd08239 THR_DH_like L-threonin 100.0 8E-47 1.7E-51 339.6 33.7 307 1-337 1-339 (339)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 9.7E-47 2.1E-51 341.1 34.0 311 1-336 2-357 (358)
11 cd08291 ETR_like_1 2-enoyl thi 100.0 2.2E-46 4.8E-51 334.6 35.8 317 1-336 1-324 (324)
12 PLN02740 Alcohol dehydrogenase 100.0 4.4E-46 9.4E-51 339.1 34.1 312 1-337 11-381 (381)
13 PLN02827 Alcohol dehydrogenase 100.0 1.3E-45 2.8E-50 335.0 34.9 310 1-338 13-377 (378)
14 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.1E-45 8.9E-50 331.2 35.6 311 1-337 2-368 (368)
15 cd08292 ETR_like_2 2-enoyl thi 100.0 5.2E-45 1.1E-49 326.0 35.7 323 1-336 1-324 (324)
16 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.6E-45 7.8E-50 326.4 34.1 299 3-335 1-328 (329)
17 PLN02586 probable cinnamyl alc 100.0 3.9E-45 8.4E-50 330.0 34.0 306 1-337 11-353 (360)
18 PLN02178 cinnamyl-alcohol dehy 100.0 2E-44 4.2E-49 326.3 35.2 291 25-337 20-348 (375)
19 PRK09880 L-idonate 5-dehydroge 100.0 6.8E-45 1.5E-49 327.1 31.7 301 1-337 5-343 (343)
20 cd08300 alcohol_DH_class_III c 100.0 1.9E-44 4.1E-49 327.1 34.2 310 1-336 3-368 (368)
21 cd08301 alcohol_DH_plants Plan 100.0 2.7E-44 5.8E-49 326.6 34.3 309 1-335 3-368 (369)
22 PLN03154 putative allyl alcoho 100.0 1E-43 2.2E-48 319.3 36.6 307 21-339 25-347 (348)
23 PRK10309 galactitol-1-phosphat 100.0 5.9E-44 1.3E-48 321.9 34.1 312 1-337 1-346 (347)
24 PLN02514 cinnamyl-alcohol dehy 100.0 9E-44 1.9E-48 321.1 34.4 308 1-341 10-354 (357)
25 cd08277 liver_alcohol_DH_like 100.0 1.3E-43 2.9E-48 321.3 34.0 310 1-335 3-364 (365)
26 TIGR02819 fdhA_non_GSH formald 100.0 1.9E-43 4.2E-48 321.3 33.2 308 1-338 3-391 (393)
27 TIGR03201 dearomat_had 6-hydro 100.0 2.2E-43 4.8E-48 318.1 33.2 299 24-336 11-348 (349)
28 cd08295 double_bond_reductase_ 100.0 4.8E-43 1E-47 314.9 34.3 302 24-337 21-338 (338)
29 cd08233 butanediol_DH_like (2R 100.0 5.7E-43 1.2E-47 316.0 33.9 306 1-335 1-350 (351)
30 cd08230 glucose_DH Glucose deh 100.0 3.1E-43 6.8E-48 317.9 31.5 302 1-337 1-355 (355)
31 cd08290 ETR 2-enoyl thioester 100.0 1.1E-42 2.5E-47 313.1 34.0 324 1-337 1-341 (341)
32 cd08294 leukotriene_B4_DH_like 100.0 2.7E-42 5.8E-47 309.2 35.1 311 1-337 3-329 (329)
33 KOG0025 Zn2+-binding dehydroge 100.0 1.2E-42 2.6E-47 284.0 29.0 325 2-338 21-353 (354)
34 cd08238 sorbose_phosphate_red 100.0 2E-42 4.3E-47 317.7 33.4 312 1-338 3-369 (410)
35 cd08293 PTGR2 Prostaglandin re 100.0 3.8E-42 8.2E-47 310.2 34.5 308 20-337 19-345 (345)
36 PTZ00354 alcohol dehydrogenase 100.0 1.1E-41 2.4E-46 305.8 36.7 329 1-342 2-333 (334)
37 COG1063 Tdh Threonine dehydrog 100.0 1.9E-42 4.2E-47 309.4 31.3 310 1-337 1-350 (350)
38 cd08231 MDR_TM0436_like Hypoth 100.0 5.3E-42 1.1E-46 310.9 34.5 312 2-337 2-361 (361)
39 TIGR02825 B4_12hDH leukotriene 100.0 5.9E-42 1.3E-46 306.2 33.9 296 24-336 19-325 (325)
40 cd08296 CAD_like Cinnamyl alco 100.0 7E-42 1.5E-46 306.7 34.5 304 1-336 1-333 (333)
41 cd08237 ribitol-5-phosphate_DH 100.0 2.3E-42 4.9E-47 310.1 29.2 294 2-338 4-340 (341)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.7E-42 5.8E-47 305.3 29.1 291 1-336 2-308 (308)
43 cd08244 MDR_enoyl_red Possible 100.0 5.5E-41 1.2E-45 300.1 37.5 320 1-337 1-324 (324)
44 cd05284 arabinose_DH_like D-ar 100.0 2.1E-41 4.5E-46 304.8 34.0 308 1-337 1-340 (340)
45 cd08274 MDR9 Medium chain dehy 100.0 3.3E-41 7.1E-46 304.7 35.0 312 1-337 1-350 (350)
46 KOG1198 Zinc-binding oxidoredu 100.0 8.9E-42 1.9E-46 300.9 30.0 311 23-338 19-346 (347)
47 PRK10754 quinone oxidoreductas 100.0 8.2E-41 1.8E-45 299.3 35.1 321 1-336 2-326 (327)
48 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.5E-40 3.2E-45 298.8 35.1 315 2-336 1-334 (336)
49 cd08297 CAD3 Cinnamyl alcohol 100.0 1.8E-40 3.9E-45 298.8 35.7 312 1-337 1-341 (341)
50 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.6E-40 7.7E-45 294.9 36.0 316 1-337 1-325 (325)
51 cd08246 crotonyl_coA_red croto 100.0 2E-40 4.4E-45 303.7 35.0 318 1-336 13-392 (393)
52 cd05282 ETR_like 2-enoyl thioe 100.0 3E-40 6.6E-45 295.1 34.3 309 24-336 14-323 (323)
53 cd08278 benzyl_alcohol_DH Benz 100.0 3.2E-40 7E-45 299.1 34.0 310 1-336 3-365 (365)
54 cd08285 NADP_ADH NADP(H)-depen 100.0 3.4E-40 7.5E-45 297.9 33.7 310 1-337 1-351 (351)
55 cd08283 FDH_like_1 Glutathione 100.0 4E-40 8.7E-45 300.4 34.3 309 1-336 1-385 (386)
56 cd08270 MDR4 Medium chain dehy 100.0 8.8E-40 1.9E-44 289.8 35.5 303 1-337 1-305 (305)
57 TIGR01751 crot-CoA-red crotony 100.0 1E-39 2.3E-44 299.1 36.0 324 1-342 8-392 (398)
58 cd08263 Zn_ADH10 Alcohol dehyd 100.0 5.1E-40 1.1E-44 298.4 33.5 310 1-336 1-367 (367)
59 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.1E-40 1.5E-44 295.3 34.1 309 1-336 1-344 (345)
60 cd08240 6_hydroxyhexanoate_dh_ 100.0 5.9E-40 1.3E-44 296.4 33.5 309 1-336 1-349 (350)
61 cd05276 p53_inducible_oxidored 100.0 1.2E-39 2.6E-44 290.8 35.1 322 1-335 1-323 (323)
62 cd08289 MDR_yhfp_like Yhfp put 100.0 1.8E-39 3.8E-44 290.6 33.6 317 1-337 1-326 (326)
63 cd05278 FDH_like Formaldehyde 100.0 1.1E-39 2.4E-44 294.4 32.2 308 1-336 1-346 (347)
64 cd08276 MDR7 Medium chain dehy 100.0 5.4E-39 1.2E-43 288.6 36.4 313 1-336 1-335 (336)
65 cd08250 Mgc45594_like Mgc45594 100.0 3.2E-39 6.8E-44 289.3 34.7 314 1-336 2-329 (329)
66 cd08249 enoyl_reductase_like e 100.0 9.7E-40 2.1E-44 293.4 31.4 312 1-337 1-339 (339)
67 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.9E-39 8.5E-44 289.6 35.1 306 1-337 1-337 (337)
68 PRK10083 putative oxidoreducta 100.0 2.5E-39 5.4E-44 291.1 33.8 305 1-338 1-338 (339)
69 cd08279 Zn_ADH_class_III Class 100.0 3.3E-39 7.1E-44 292.6 34.6 310 1-334 1-362 (363)
70 cd08253 zeta_crystallin Zeta-c 100.0 1.1E-38 2.4E-43 284.9 36.3 319 1-336 1-324 (325)
71 PRK09422 ethanol-active dehydr 100.0 5.4E-39 1.2E-43 288.8 34.2 306 1-338 1-337 (338)
72 PRK13771 putative alcohol dehy 100.0 3.9E-39 8.5E-44 289.3 32.8 305 1-337 1-333 (334)
73 cd08299 alcohol_DH_class_I_II_ 100.0 8.2E-39 1.8E-43 290.4 34.5 310 1-337 8-373 (373)
74 cd08259 Zn_ADH5 Alcohol dehydr 100.0 9.7E-39 2.1E-43 286.5 34.3 305 1-336 1-332 (332)
75 TIGR02823 oxido_YhdH putative 100.0 2.5E-38 5.3E-43 282.8 36.2 313 2-336 1-322 (323)
76 cd08282 PFDH_like Pseudomonas 100.0 1.3E-38 2.9E-43 289.6 34.7 306 1-337 1-375 (375)
77 cd05286 QOR2 Quinone oxidoredu 100.0 3.4E-38 7.4E-43 281.0 36.5 320 2-337 1-320 (320)
78 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.2E-38 2.6E-43 287.8 33.8 305 1-335 1-350 (350)
79 COG2130 Putative NADP-dependen 100.0 7.7E-39 1.7E-43 264.4 29.2 301 24-339 27-340 (340)
80 cd08286 FDH_like_ADH2 formalde 100.0 1.9E-38 4.2E-43 286.0 34.7 309 1-337 1-345 (345)
81 cd08284 FDH_like_2 Glutathione 100.0 2E-38 4.2E-43 285.9 34.1 306 1-336 1-343 (344)
82 cd08272 MDR6 Medium chain dehy 100.0 3.7E-38 8.1E-43 281.8 35.4 318 1-337 1-326 (326)
83 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2E-38 4.3E-43 285.5 33.8 309 1-336 1-341 (341)
84 cd08235 iditol_2_DH_like L-idi 100.0 3.1E-38 6.7E-43 284.5 35.0 305 1-335 1-342 (343)
85 cd08252 AL_MDR Arginate lyase 100.0 4.3E-38 9.2E-43 282.8 35.5 320 1-336 1-336 (336)
86 cd08243 quinone_oxidoreductase 100.0 3.2E-38 7E-43 281.6 34.5 309 1-335 1-319 (320)
87 TIGR02824 quinone_pig3 putativ 100.0 5E-38 1.1E-42 280.8 35.6 323 1-336 1-324 (325)
88 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.9E-38 6.2E-43 284.1 34.1 310 1-337 1-338 (338)
89 cd05283 CAD1 Cinnamyl alcohol 100.0 2.1E-38 4.5E-43 284.6 32.9 301 2-336 1-337 (337)
90 cd05279 Zn_ADH1 Liver alcohol 100.0 3.2E-38 6.9E-43 286.1 33.7 307 2-335 2-364 (365)
91 cd08266 Zn_ADH_like1 Alcohol d 100.0 8.6E-38 1.9E-42 281.3 36.0 315 1-337 1-342 (342)
92 PRK05396 tdh L-threonine 3-deh 100.0 3.6E-38 7.8E-43 283.7 33.5 309 1-338 1-341 (341)
93 cd08268 MDR2 Medium chain dehy 100.0 1.9E-37 4.2E-42 277.3 36.4 322 1-336 1-327 (328)
94 cd08273 MDR8 Medium chain dehy 100.0 1.6E-37 3.5E-42 278.5 35.0 316 2-335 2-330 (331)
95 cd08236 sugar_DH NAD(P)-depend 100.0 1.5E-37 3.2E-42 280.0 34.1 309 1-335 1-343 (343)
96 cd08288 MDR_yhdh Yhdh putative 100.0 3.4E-37 7.4E-42 275.6 35.9 315 1-337 1-324 (324)
97 cd08248 RTN4I1 Human Reticulon 100.0 8.5E-38 1.8E-42 282.4 29.5 319 1-335 1-349 (350)
98 cd08241 QOR1 Quinone oxidoredu 100.0 1.1E-36 2.3E-41 271.9 35.5 321 1-335 1-322 (323)
99 cd08271 MDR5 Medium chain dehy 100.0 1.7E-36 3.8E-41 271.0 36.7 318 1-337 1-325 (325)
100 cd08287 FDH_like_ADH3 formalde 100.0 5.8E-37 1.3E-41 276.4 33.2 306 1-336 1-344 (345)
101 cd08234 threonine_DH_like L-th 100.0 1.1E-36 2.4E-41 273.3 33.6 301 1-335 1-333 (334)
102 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.3E-37 1.6E-41 273.5 31.6 297 1-333 1-324 (325)
103 cd05281 TDH Threonine dehydrog 100.0 1.3E-36 2.8E-41 273.6 33.3 308 1-337 1-341 (341)
104 cd08251 polyketide_synthase po 100.0 2E-36 4.2E-41 267.9 33.0 299 31-335 2-303 (303)
105 cd08247 AST1_like AST1 is a cy 100.0 2.8E-36 6E-41 272.6 34.4 319 2-336 2-351 (352)
106 cd08298 CAD2 Cinnamyl alcohol 100.0 1.9E-36 4.1E-41 271.3 33.0 300 1-335 1-329 (329)
107 TIGR00692 tdh L-threonine 3-de 100.0 1.9E-36 4.2E-41 272.3 32.9 297 24-337 11-340 (340)
108 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.3E-36 7.2E-41 274.6 34.0 296 24-335 39-383 (384)
109 cd08242 MDR_like Medium chain 100.0 1.9E-36 4.1E-41 270.1 31.0 288 1-337 1-319 (319)
110 cd05288 PGDH Prostaglandin deh 100.0 4.9E-36 1.1E-40 268.6 33.5 315 2-335 3-329 (329)
111 cd05285 sorbitol_DH Sorbitol d 100.0 5.7E-36 1.2E-40 269.6 33.5 297 24-335 10-341 (343)
112 cd08245 CAD Cinnamyl alcohol d 100.0 6.4E-36 1.4E-40 268.0 32.8 301 2-335 1-330 (330)
113 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.3E-35 2.9E-40 263.9 33.4 298 24-335 7-311 (312)
114 cd08232 idonate-5-DH L-idonate 100.0 1.6E-35 3.4E-40 266.5 32.7 293 24-337 9-339 (339)
115 PLN02702 L-idonate 5-dehydroge 100.0 2.7E-35 5.8E-40 267.2 33.8 293 26-336 31-363 (364)
116 cd05289 MDR_like_2 alcohol deh 100.0 3E-35 6.5E-40 261.0 33.3 304 1-335 1-309 (309)
117 cd08275 MDR3 Medium chain dehy 100.0 1E-34 2.3E-39 260.8 36.3 320 2-337 1-337 (337)
118 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.7E-35 5.9E-40 260.7 31.6 275 1-302 1-306 (306)
119 cd05195 enoyl_red enoyl reduct 100.0 6E-35 1.3E-39 256.7 31.0 290 38-335 1-293 (293)
120 cd08267 MDR1 Medium chain dehy 100.0 4.6E-34 1E-38 254.7 33.3 295 25-335 15-319 (319)
121 smart00829 PKS_ER Enoylreducta 100.0 1.4E-33 2.9E-38 247.6 30.5 284 42-335 2-288 (288)
122 TIGR03366 HpnZ_proposed putati 100.0 2.7E-33 5.9E-38 244.6 23.2 232 70-317 1-280 (280)
123 KOG1196 Predicted NAD-dependen 100.0 9.7E-32 2.1E-36 221.6 30.7 299 29-339 29-342 (343)
124 cd05188 MDR Medium chain reduc 100.0 4.2E-32 9.1E-37 236.3 27.9 236 39-279 1-260 (271)
125 KOG1202 Animal-type fatty acid 100.0 3.7E-33 8.1E-38 262.7 19.1 295 36-343 1443-1747(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 1.9E-29 4.1E-34 220.5 24.8 251 66-334 19-276 (277)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 4.7E-18 1E-22 130.9 13.0 128 161-300 1-129 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.8 3.1E-18 6.7E-23 127.4 8.3 82 37-118 1-109 (109)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.5 1.2E-14 2.6E-19 111.4 6.1 124 193-335 1-127 (127)
130 PRK09424 pntA NAD(P) transhydr 99.5 5.6E-12 1.2E-16 116.5 20.2 253 38-306 31-334 (509)
131 cd00401 AdoHcyase S-adenosyl-L 99.4 5.4E-12 1.2E-16 113.8 15.5 175 138-339 189-378 (413)
132 TIGR00561 pntA NAD(P) transhyd 98.8 4.1E-07 9E-12 84.3 16.0 213 38-255 30-288 (511)
133 PRK08306 dipicolinate synthase 98.6 3.7E-06 8E-11 73.7 17.9 95 149-256 151-246 (296)
134 PRK11873 arsM arsenite S-adeno 98.5 1.3E-06 2.8E-11 76.0 10.2 170 144-336 72-260 (272)
135 PRK05476 S-adenosyl-L-homocyst 98.4 3.5E-06 7.5E-11 76.7 12.5 103 137-255 198-303 (425)
136 PLN02494 adenosylhomocysteinas 98.3 1.6E-05 3.6E-10 72.6 12.5 101 138-254 241-344 (477)
137 TIGR00936 ahcY adenosylhomocys 98.2 1.8E-05 3.8E-10 71.7 12.3 102 137-254 181-285 (406)
138 TIGR02853 spore_dpaA dipicolin 98.1 7.1E-05 1.5E-09 65.3 13.5 95 149-256 150-245 (287)
139 PF11017 DUF2855: Protein of u 98.1 0.00092 2E-08 58.2 18.9 239 70-329 33-312 (314)
140 PTZ00075 Adenosylhomocysteinas 98.1 0.0001 2.2E-09 67.7 13.5 99 139-253 242-343 (476)
141 TIGR00518 alaDH alanine dehydr 98.0 0.00014 3E-09 65.9 13.3 97 150-255 167-271 (370)
142 PRK12771 putative glutamate sy 98.0 2.1E-05 4.6E-10 75.7 8.5 97 146-250 133-252 (564)
143 COG4221 Short-chain alcohol de 98.0 3.8E-05 8.2E-10 63.6 8.7 80 149-231 5-91 (246)
144 PRK08324 short chain dehydroge 98.0 4.1E-05 8.8E-10 75.4 10.0 115 102-230 385-507 (681)
145 COG0300 DltE Short-chain dehyd 97.9 0.00011 2.5E-09 62.4 10.9 81 148-231 4-94 (265)
146 COG2518 Pcm Protein-L-isoaspar 97.9 0.00016 3.4E-09 58.9 10.7 113 126-251 51-169 (209)
147 cd05213 NAD_bind_Glutamyl_tRNA 97.9 9.5E-05 2.1E-09 65.5 10.5 108 113-234 139-251 (311)
148 COG3967 DltE Short-chain dehyd 97.9 6.5E-05 1.4E-09 60.2 8.2 80 149-231 4-88 (245)
149 PRK05786 fabG 3-ketoacyl-(acyl 97.9 0.0003 6.5E-09 59.7 13.1 105 149-254 4-138 (238)
150 PRK00517 prmA ribosomal protei 97.9 0.00041 8.8E-09 59.5 13.5 141 88-253 66-215 (250)
151 PF13460 NAD_binding_10: NADH( 97.9 0.0011 2.3E-08 53.9 15.0 93 153-254 1-100 (183)
152 PRK05993 short chain dehydroge 97.8 0.00014 3.1E-09 63.4 10.1 80 149-231 3-86 (277)
153 PRK06198 short chain dehydroge 97.8 0.002 4.3E-08 55.5 16.1 80 149-231 5-94 (260)
154 KOG1209 1-Acyl dihydroxyaceton 97.8 0.00027 5.8E-09 57.0 9.3 106 149-255 6-142 (289)
155 PRK05693 short chain dehydroge 97.7 0.00021 4.5E-09 62.3 9.6 78 151-231 2-82 (274)
156 PF01488 Shikimate_DH: Shikima 97.7 9.6E-05 2.1E-09 56.9 6.5 93 149-253 11-111 (135)
157 PRK06182 short chain dehydroge 97.7 0.00051 1.1E-08 59.7 11.5 80 149-231 2-84 (273)
158 KOG1205 Predicted dehydrogenas 97.7 0.00091 2E-08 57.5 12.0 110 149-258 11-156 (282)
159 PRK12742 oxidoreductase; Provi 97.7 0.0011 2.4E-08 56.2 12.6 103 149-255 5-135 (237)
160 PRK06139 short chain dehydroge 97.6 0.00042 9E-09 62.0 10.1 80 149-231 6-94 (330)
161 PLN03209 translocon at the inn 97.6 0.00059 1.3E-08 64.4 10.4 48 143-190 73-120 (576)
162 PRK08265 short chain dehydroge 97.6 0.0014 3.1E-08 56.6 12.2 80 149-231 5-90 (261)
163 PRK07109 short chain dehydroge 97.6 0.0016 3.4E-08 58.5 12.8 80 149-231 7-95 (334)
164 PRK08177 short chain dehydroge 97.6 0.00069 1.5E-08 57.0 9.9 80 151-231 2-81 (225)
165 COG2230 Cfa Cyclopropane fatty 97.5 0.0036 7.8E-08 53.7 13.8 117 120-256 49-181 (283)
166 PRK06484 short chain dehydroge 97.5 0.012 2.5E-07 56.4 18.8 103 149-254 268-403 (520)
167 PRK07806 short chain dehydroge 97.5 0.0024 5.2E-08 54.6 12.6 101 149-252 5-135 (248)
168 PRK05872 short chain dehydroge 97.5 0.00088 1.9E-08 59.1 9.8 80 149-231 8-95 (296)
169 PRK00045 hemA glutamyl-tRNA re 97.5 0.0012 2.5E-08 61.2 10.7 149 70-232 91-253 (423)
170 PF00670 AdoHcyase_NAD: S-aden 97.4 0.0022 4.8E-08 50.2 10.3 95 146-256 19-115 (162)
171 PRK08339 short chain dehydroge 97.4 0.0017 3.8E-08 56.1 11.0 80 149-231 7-95 (263)
172 PLN02780 ketoreductase/ oxidor 97.4 0.0014 2.9E-08 58.5 10.2 81 149-230 52-141 (320)
173 PRK07060 short chain dehydroge 97.4 0.0015 3.3E-08 55.6 10.2 78 149-231 8-87 (245)
174 TIGR03325 BphB_TodD cis-2,3-di 97.4 0.0015 3.3E-08 56.3 10.1 80 149-230 4-88 (262)
175 PRK08217 fabG 3-ketoacyl-(acyl 97.4 0.0018 4E-08 55.3 10.5 79 149-230 4-91 (253)
176 PRK06128 oxidoreductase; Provi 97.4 0.0034 7.4E-08 55.4 12.4 83 149-231 54-144 (300)
177 PRK11705 cyclopropane fatty ac 97.4 0.0011 2.4E-08 60.4 9.4 108 133-251 151-267 (383)
178 PF02353 CMAS: Mycolic acid cy 97.4 0.00046 9.9E-09 59.7 6.6 102 139-251 52-166 (273)
179 PRK05866 short chain dehydroge 97.4 0.0015 3.3E-08 57.4 10.0 80 149-231 39-127 (293)
180 PRK06953 short chain dehydroge 97.4 0.0014 3E-08 55.1 9.3 78 151-231 2-80 (222)
181 PRK08017 oxidoreductase; Provi 97.4 0.0014 3.1E-08 56.2 9.6 80 151-231 3-84 (256)
182 PRK06200 2,3-dihydroxy-2,3-dih 97.4 0.0024 5.2E-08 55.2 10.8 79 149-230 5-89 (263)
183 PRK07904 short chain dehydroge 97.3 0.0021 4.6E-08 55.2 10.4 82 147-231 5-97 (253)
184 PRK07814 short chain dehydroge 97.3 0.0018 3.8E-08 56.0 9.9 80 149-231 9-97 (263)
185 PRK06196 oxidoreductase; Provi 97.3 0.0016 3.4E-08 58.0 9.8 79 149-230 25-108 (315)
186 PRK06057 short chain dehydroge 97.3 0.0021 4.6E-08 55.2 10.1 80 149-231 6-89 (255)
187 PRK07062 short chain dehydroge 97.3 0.0028 6E-08 54.8 10.5 80 149-231 7-97 (265)
188 PRK06719 precorrin-2 dehydroge 97.3 0.0047 1E-07 48.7 10.8 87 149-249 12-98 (157)
189 PF02826 2-Hacid_dh_C: D-isome 97.3 0.0024 5.2E-08 51.6 9.4 87 149-251 35-127 (178)
190 PRK07478 short chain dehydroge 97.3 0.0024 5.1E-08 54.8 10.0 82 149-231 5-93 (254)
191 TIGR00507 aroE shikimate 5-deh 97.3 0.004 8.7E-08 54.0 11.4 92 146-251 113-214 (270)
192 PRK00377 cbiT cobalt-precorrin 97.3 0.0076 1.7E-07 49.7 12.5 99 143-249 34-143 (198)
193 PRK07825 short chain dehydroge 97.3 0.0029 6.3E-08 54.9 10.5 79 150-231 5-88 (273)
194 PRK07831 short chain dehydroge 97.3 0.0015 3.3E-08 56.3 8.7 82 147-231 14-107 (262)
195 PRK12829 short chain dehydroge 97.3 0.002 4.4E-08 55.5 9.4 81 148-231 9-96 (264)
196 PRK06500 short chain dehydroge 97.3 0.0025 5.5E-08 54.4 9.8 82 149-231 5-90 (249)
197 PRK09072 short chain dehydroge 97.2 0.0037 8E-08 54.0 10.8 82 149-231 4-90 (263)
198 PRK06720 hypothetical protein; 97.2 0.0057 1.2E-07 48.9 11.0 81 149-230 15-102 (169)
199 PRK07576 short chain dehydroge 97.2 0.0043 9.3E-08 53.6 11.1 79 149-230 8-95 (264)
200 PRK05867 short chain dehydroge 97.2 0.0026 5.6E-08 54.6 9.7 80 149-231 8-96 (253)
201 TIGR01832 kduD 2-deoxy-D-gluco 97.2 0.0034 7.4E-08 53.6 10.4 82 149-231 4-90 (248)
202 PRK05854 short chain dehydroge 97.2 0.0036 7.7E-08 55.7 10.8 80 149-231 13-103 (313)
203 PRK06949 short chain dehydroge 97.2 0.0038 8.2E-08 53.7 10.7 82 149-231 8-96 (258)
204 PRK06194 hypothetical protein; 97.2 0.004 8.6E-08 54.5 10.9 82 149-231 5-93 (287)
205 PF00106 adh_short: short chai 97.2 0.0026 5.7E-08 50.6 9.0 81 151-231 1-90 (167)
206 PRK08267 short chain dehydroge 97.2 0.0035 7.6E-08 54.0 10.4 78 151-231 2-87 (260)
207 cd01078 NAD_bind_H4MPT_DH NADP 97.2 0.017 3.6E-07 47.4 13.9 78 149-233 27-109 (194)
208 PRK12939 short chain dehydroge 97.2 0.0039 8.4E-08 53.3 10.3 80 149-231 6-94 (250)
209 PRK07832 short chain dehydroge 97.2 0.007 1.5E-07 52.5 12.0 78 151-231 1-88 (272)
210 PRK08594 enoyl-(acyl carrier p 97.2 0.0078 1.7E-07 51.8 12.1 79 149-230 6-96 (257)
211 PRK08862 short chain dehydroge 97.2 0.0032 7E-08 53.1 9.6 81 149-230 4-92 (227)
212 PRK06841 short chain dehydroge 97.2 0.003 6.6E-08 54.2 9.6 82 149-231 14-99 (255)
213 PRK07231 fabG 3-ketoacyl-(acyl 97.2 0.0017 3.7E-08 55.5 8.0 82 149-231 4-91 (251)
214 PRK07890 short chain dehydroge 97.2 0.0048 1E-07 53.0 10.8 80 149-231 4-92 (258)
215 PRK06180 short chain dehydroge 97.2 0.0036 7.7E-08 54.6 10.1 80 149-231 3-88 (277)
216 CHL00194 ycf39 Ycf39; Provisio 97.2 0.0037 8E-08 55.7 10.3 94 152-253 2-111 (317)
217 PRK07453 protochlorophyllide o 97.2 0.0036 7.9E-08 55.9 10.2 79 149-230 5-92 (322)
218 PRK12481 2-deoxy-D-gluconate 3 97.2 0.0046 9.9E-08 53.0 10.5 80 149-231 7-93 (251)
219 PRK07523 gluconate 5-dehydroge 97.2 0.0047 1E-07 53.0 10.6 80 149-231 9-97 (255)
220 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.001 2.2E-08 62.4 6.6 95 143-254 27-126 (450)
221 PRK06125 short chain dehydroge 97.1 0.0058 1.3E-07 52.6 10.8 80 149-231 6-91 (259)
222 PRK09242 tropinone reductase; 97.1 0.0059 1.3E-07 52.5 10.8 80 149-231 8-98 (257)
223 PRK05876 short chain dehydroge 97.1 0.006 1.3E-07 53.1 10.9 79 149-230 5-92 (275)
224 PRK06181 short chain dehydroge 97.1 0.0046 9.9E-08 53.3 10.1 82 150-231 1-88 (263)
225 TIGR01470 cysG_Nterm siroheme 97.1 0.0064 1.4E-07 50.3 10.3 91 149-251 8-100 (205)
226 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0046 1E-07 58.0 10.7 79 149-230 209-293 (450)
227 PRK06197 short chain dehydroge 97.1 0.0058 1.3E-07 54.1 10.9 81 149-230 15-104 (306)
228 TIGR01035 hemA glutamyl-tRNA r 97.1 0.0073 1.6E-07 55.8 11.8 139 70-231 89-250 (417)
229 PRK07677 short chain dehydroge 97.1 0.0051 1.1E-07 52.7 10.2 78 150-230 1-87 (252)
230 PRK08303 short chain dehydroge 97.1 0.0052 1.1E-07 54.4 10.4 35 149-183 7-41 (305)
231 KOG0725 Reductases with broad 97.1 0.0031 6.7E-08 54.6 8.7 81 148-231 6-99 (270)
232 PRK06114 short chain dehydroge 97.1 0.005 1.1E-07 52.8 10.1 80 149-231 7-96 (254)
233 cd01080 NAD_bind_m-THF_DH_Cycl 97.1 0.0085 1.9E-07 47.7 10.5 97 128-254 22-119 (168)
234 PRK08643 acetoin reductase; Va 97.1 0.0052 1.1E-07 52.8 10.1 79 150-231 2-89 (256)
235 PRK06101 short chain dehydroge 97.1 0.0055 1.2E-07 52.1 10.2 76 151-230 2-80 (240)
236 PRK06172 short chain dehydroge 97.1 0.0052 1.1E-07 52.6 10.1 80 149-231 6-94 (253)
237 PRK09186 flagellin modificatio 97.1 0.0047 1E-07 53.0 9.7 79 149-230 3-92 (256)
238 PRK08213 gluconate 5-dehydroge 97.1 0.0056 1.2E-07 52.7 10.2 81 149-231 11-99 (259)
239 PRK09291 short chain dehydroge 97.1 0.0058 1.3E-07 52.5 10.2 74 150-230 2-82 (257)
240 PRK07063 short chain dehydroge 97.1 0.0055 1.2E-07 52.8 10.0 80 149-231 6-96 (260)
241 PRK06505 enoyl-(acyl carrier p 97.1 0.0056 1.2E-07 53.2 10.1 79 149-230 6-94 (271)
242 PRK12937 short chain dehydroge 97.1 0.017 3.7E-07 49.1 13.0 82 149-231 4-93 (245)
243 PRK06179 short chain dehydroge 97.1 0.0019 4.1E-08 56.0 7.2 78 149-231 3-83 (270)
244 PRK08628 short chain dehydroge 97.1 0.0051 1.1E-07 52.9 9.8 82 149-231 6-93 (258)
245 PRK07035 short chain dehydroge 97.1 0.0062 1.3E-07 52.2 10.2 81 149-230 7-94 (252)
246 PRK08589 short chain dehydroge 97.0 0.0063 1.4E-07 52.9 10.4 79 149-231 5-92 (272)
247 PRK04148 hypothetical protein; 97.0 0.0087 1.9E-07 45.4 9.6 99 146-256 13-113 (134)
248 PRK12367 short chain dehydroge 97.0 0.0057 1.2E-07 52.3 9.9 74 149-231 13-89 (245)
249 PRK12747 short chain dehydroge 97.0 0.015 3.2E-07 49.8 12.6 39 149-187 3-42 (252)
250 PRK07774 short chain dehydroge 97.0 0.0077 1.7E-07 51.5 10.8 82 149-231 5-93 (250)
251 PRK05717 oxidoreductase; Valid 97.0 0.0065 1.4E-07 52.2 10.3 80 149-231 9-94 (255)
252 PRK06718 precorrin-2 dehydroge 97.0 0.014 2.9E-07 48.2 11.6 90 149-250 9-99 (202)
253 PRK10538 malonic semialdehyde 97.0 0.006 1.3E-07 52.2 10.0 80 152-231 2-84 (248)
254 PRK12823 benD 1,6-dihydroxycyc 97.0 0.0049 1.1E-07 53.1 9.6 79 149-230 7-93 (260)
255 PRK07326 short chain dehydroge 97.0 0.0066 1.4E-07 51.4 10.2 82 149-231 5-92 (237)
256 PRK06124 gluconate 5-dehydroge 97.0 0.0074 1.6E-07 51.8 10.5 80 149-231 10-98 (256)
257 PRK12828 short chain dehydroge 97.0 0.005 1.1E-07 52.1 9.3 80 149-231 6-92 (239)
258 COG4122 Predicted O-methyltran 97.0 0.0089 1.9E-07 49.5 10.2 103 142-250 52-165 (219)
259 PRK08085 gluconate 5-dehydroge 97.0 0.0073 1.6E-07 51.8 10.4 80 149-231 8-96 (254)
260 PRK08277 D-mannonate oxidoredu 97.0 0.0067 1.5E-07 52.8 10.2 81 149-230 9-96 (278)
261 PRK07533 enoyl-(acyl carrier p 97.0 0.007 1.5E-07 52.1 10.2 81 149-230 9-97 (258)
262 PRK07856 short chain dehydroge 97.0 0.007 1.5E-07 51.9 10.1 76 149-231 5-85 (252)
263 COG2242 CobL Precorrin-6B meth 97.0 0.01 2.2E-07 47.4 10.0 99 143-250 28-134 (187)
264 PRK06079 enoyl-(acyl carrier p 97.0 0.0068 1.5E-07 52.0 10.0 79 149-230 6-92 (252)
265 PRK13394 3-hydroxybutyrate deh 97.0 0.008 1.7E-07 51.7 10.5 80 149-231 6-94 (262)
266 PRK08251 short chain dehydroge 97.0 0.0071 1.5E-07 51.6 10.0 78 150-230 2-90 (248)
267 PRK05653 fabG 3-ketoacyl-(acyl 97.0 0.007 1.5E-07 51.4 9.9 80 149-231 4-92 (246)
268 TIGR00438 rrmJ cell division p 97.0 0.0093 2E-07 48.7 10.1 99 144-251 27-146 (188)
269 COG2910 Putative NADH-flavin r 97.0 0.0028 6.1E-08 50.2 6.4 94 152-254 2-107 (211)
270 PRK07985 oxidoreductase; Provi 97.0 0.014 3.1E-07 51.3 12.0 79 149-230 48-137 (294)
271 PRK06138 short chain dehydroge 97.0 0.0067 1.5E-07 51.9 9.7 82 149-231 4-91 (252)
272 PRK07454 short chain dehydroge 97.0 0.011 2.3E-07 50.3 10.8 83 148-231 4-93 (241)
273 PRK08703 short chain dehydroge 97.0 0.0047 1E-07 52.4 8.6 82 149-231 5-97 (239)
274 PRK08264 short chain dehydroge 97.0 0.0076 1.6E-07 51.1 9.8 75 149-231 5-83 (238)
275 COG3288 PntA NAD/NADP transhyd 97.0 0.025 5.5E-07 48.6 12.4 154 146-301 160-335 (356)
276 PRK06484 short chain dehydroge 96.9 0.0059 1.3E-07 58.4 10.1 80 149-231 4-89 (520)
277 PRK12429 3-hydroxybutyrate deh 96.9 0.0086 1.9E-07 51.4 10.2 80 149-231 3-91 (258)
278 PF12847 Methyltransf_18: Meth 96.9 0.008 1.7E-07 44.3 8.7 93 149-250 1-110 (112)
279 PRK07791 short chain dehydroge 96.9 0.0092 2E-07 52.3 10.4 37 148-184 4-40 (286)
280 COG1748 LYS9 Saccharopine dehy 96.9 0.0066 1.4E-07 54.7 9.4 93 151-252 2-100 (389)
281 PRK06935 2-deoxy-D-gluconate 3 96.9 0.012 2.6E-07 50.6 11.0 81 149-231 14-101 (258)
282 PRK08278 short chain dehydroge 96.9 0.0067 1.5E-07 52.7 9.4 37 149-185 5-41 (273)
283 PRK06482 short chain dehydroge 96.9 0.011 2.4E-07 51.4 10.8 78 151-231 3-86 (276)
284 PRK07067 sorbitol dehydrogenas 96.9 0.012 2.6E-07 50.6 10.8 79 149-230 5-89 (257)
285 PRK07666 fabG 3-ketoacyl-(acyl 96.9 0.01 2.2E-07 50.4 10.2 82 149-231 6-94 (239)
286 PRK03369 murD UDP-N-acetylmura 96.9 0.004 8.6E-08 58.9 8.3 74 146-232 8-81 (488)
287 PRK08340 glucose-1-dehydrogena 96.9 0.011 2.3E-07 50.9 10.5 79 152-231 2-86 (259)
288 PRK08993 2-deoxy-D-gluconate 3 96.9 0.012 2.7E-07 50.4 10.7 82 149-231 9-95 (253)
289 KOG1014 17 beta-hydroxysteroid 96.9 0.0079 1.7E-07 51.8 9.2 81 149-231 48-136 (312)
290 PLN02476 O-methyltransferase 96.9 0.01 2.3E-07 51.1 10.0 106 142-249 111-226 (278)
291 PRK07775 short chain dehydroge 96.9 0.012 2.6E-07 51.2 10.6 83 149-231 9-97 (274)
292 PRK08226 short chain dehydroge 96.9 0.0091 2E-07 51.5 9.8 79 149-230 5-91 (263)
293 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0082 1.8E-07 48.0 8.8 103 150-255 20-143 (168)
294 COG0686 Ald Alanine dehydrogen 96.9 0.005 1.1E-07 52.9 7.7 95 151-255 169-272 (371)
295 PRK08263 short chain dehydroge 96.9 0.011 2.3E-07 51.5 10.3 81 150-231 3-87 (275)
296 PRK12743 oxidoreductase; Provi 96.9 0.01 2.2E-07 51.0 10.1 79 150-231 2-90 (256)
297 PRK07024 short chain dehydroge 96.9 0.013 2.7E-07 50.5 10.6 79 150-231 2-88 (257)
298 PRK05650 short chain dehydroge 96.9 0.01 2.2E-07 51.4 10.1 79 152-231 2-87 (270)
299 cd01075 NAD_bind_Leu_Phe_Val_D 96.9 0.045 9.7E-07 45.1 13.3 79 149-242 27-107 (200)
300 PRK06483 dihydromonapterin red 96.9 0.012 2.6E-07 49.9 10.3 79 150-231 2-84 (236)
301 PRK12826 3-ketoacyl-(acyl-carr 96.9 0.0099 2.1E-07 50.7 9.9 82 149-231 5-93 (251)
302 PRK08415 enoyl-(acyl carrier p 96.9 0.013 2.8E-07 51.0 10.6 79 149-230 4-92 (274)
303 PRK12936 3-ketoacyl-(acyl-carr 96.8 0.015 3.3E-07 49.4 10.8 82 149-231 5-90 (245)
304 KOG1610 Corticosteroid 11-beta 96.8 0.015 3.3E-07 50.2 10.4 111 148-258 27-171 (322)
305 PRK05875 short chain dehydroge 96.8 0.01 2.2E-07 51.6 9.9 41 149-189 6-46 (276)
306 TIGR00406 prmA ribosomal prote 96.8 0.0081 1.8E-07 52.6 9.1 144 89-252 106-260 (288)
307 PF01596 Methyltransf_3: O-met 96.8 0.0031 6.7E-08 52.0 6.1 105 143-249 39-153 (205)
308 PRK12384 sorbitol-6-phosphate 96.8 0.012 2.5E-07 50.7 10.0 81 150-231 2-91 (259)
309 PRK08690 enoyl-(acyl carrier p 96.8 0.012 2.6E-07 50.8 10.1 82 149-231 5-94 (261)
310 TIGR03206 benzo_BadH 2-hydroxy 96.8 0.015 3.2E-07 49.6 10.6 81 149-230 2-89 (250)
311 PRK06603 enoyl-(acyl carrier p 96.8 0.013 2.7E-07 50.6 10.2 79 149-230 7-95 (260)
312 PRK07370 enoyl-(acyl carrier p 96.8 0.0097 2.1E-07 51.3 9.4 79 149-230 5-96 (258)
313 PRK07097 gluconate 5-dehydroge 96.8 0.013 2.9E-07 50.6 10.3 82 149-231 9-97 (265)
314 PRK06113 7-alpha-hydroxysteroi 96.8 0.013 2.8E-07 50.3 10.1 80 149-231 10-98 (255)
315 PRK13942 protein-L-isoaspartat 96.8 0.036 7.7E-07 46.2 12.2 97 143-250 70-175 (212)
316 PRK06914 short chain dehydroge 96.8 0.015 3.3E-07 50.6 10.4 80 149-231 2-91 (280)
317 PLN02253 xanthoxin dehydrogena 96.7 0.011 2.5E-07 51.4 9.5 80 149-231 17-104 (280)
318 PRK13943 protein-L-isoaspartat 96.7 0.015 3.2E-07 51.5 10.2 99 143-250 74-179 (322)
319 PRK05884 short chain dehydroge 96.7 0.016 3.5E-07 48.7 10.1 75 152-230 2-78 (223)
320 PRK07889 enoyl-(acyl carrier p 96.7 0.013 2.9E-07 50.4 9.5 82 149-231 6-95 (256)
321 PRK07792 fabG 3-ketoacyl-(acyl 96.7 0.018 4E-07 51.0 10.6 83 149-231 11-99 (306)
322 PRK13940 glutamyl-tRNA reducta 96.7 0.028 6.1E-07 51.7 11.9 73 149-233 180-254 (414)
323 KOG1210 Predicted 3-ketosphing 96.7 0.016 3.6E-07 49.9 9.5 86 146-231 29-122 (331)
324 PRK07102 short chain dehydroge 96.7 0.019 4.1E-07 48.8 10.3 79 151-231 2-86 (243)
325 PRK14175 bifunctional 5,10-met 96.7 0.027 5.9E-07 48.7 10.9 98 128-254 136-233 (286)
326 KOG1201 Hydroxysteroid 17-beta 96.7 0.009 2E-07 51.2 7.9 81 149-231 37-124 (300)
327 COG0169 AroE Shikimate 5-dehyd 96.7 0.02 4.4E-07 49.5 10.2 88 149-250 125-225 (283)
328 PRK07984 enoyl-(acyl carrier p 96.7 0.02 4.3E-07 49.5 10.3 81 149-230 5-93 (262)
329 PRK05557 fabG 3-ketoacyl-(acyl 96.7 0.019 4.1E-07 48.8 10.2 80 149-231 4-93 (248)
330 PRK00258 aroE shikimate 5-dehy 96.7 0.025 5.4E-07 49.3 10.9 91 149-250 122-220 (278)
331 KOG1208 Dehydrogenases with di 96.7 0.0075 1.6E-07 53.2 7.6 82 149-230 34-123 (314)
332 PRK08063 enoyl-(acyl carrier p 96.7 0.017 3.6E-07 49.3 9.8 83 149-231 3-92 (250)
333 TIGR01289 LPOR light-dependent 96.7 0.023 5E-07 50.5 10.9 79 150-231 3-91 (314)
334 PF01135 PCMT: Protein-L-isoas 96.6 0.0089 1.9E-07 49.5 7.6 107 132-250 57-171 (209)
335 PRK07577 short chain dehydroge 96.6 0.013 2.9E-07 49.4 9.0 75 149-231 2-78 (234)
336 PRK07424 bifunctional sterol d 96.6 0.019 4.1E-07 52.7 10.4 75 149-231 177-255 (406)
337 PRK07502 cyclohexadienyl dehyd 96.6 0.012 2.5E-07 52.2 8.9 89 151-252 7-101 (307)
338 PRK06523 short chain dehydroge 96.6 0.013 2.8E-07 50.4 8.9 76 149-230 8-86 (260)
339 PRK13656 trans-2-enoyl-CoA red 96.6 0.035 7.5E-07 50.1 11.6 83 148-232 39-142 (398)
340 PRK06701 short chain dehydroge 96.6 0.02 4.3E-07 50.3 10.2 36 149-184 45-80 (290)
341 PRK08159 enoyl-(acyl carrier p 96.6 0.022 4.7E-07 49.5 10.3 82 148-230 8-97 (272)
342 PRK08416 7-alpha-hydroxysteroi 96.6 0.02 4.3E-07 49.3 10.0 81 149-230 7-96 (260)
343 PRK07074 short chain dehydroge 96.6 0.022 4.8E-07 48.9 10.3 81 150-231 2-87 (257)
344 PRK13944 protein-L-isoaspartat 96.6 0.032 6.9E-07 46.2 10.6 97 143-250 66-172 (205)
345 TIGR01963 PHB_DH 3-hydroxybuty 96.6 0.026 5.6E-07 48.3 10.4 79 150-231 1-88 (255)
346 PRK08219 short chain dehydroge 96.6 0.02 4.3E-07 48.0 9.6 77 151-231 4-81 (227)
347 PRK06398 aldose dehydrogenase; 96.6 0.013 2.7E-07 50.5 8.5 75 149-231 5-82 (258)
348 PRK05565 fabG 3-ketoacyl-(acyl 96.6 0.02 4.3E-07 48.7 9.6 82 150-231 5-93 (247)
349 PLN00141 Tic62-NAD(P)-related 96.5 0.024 5.2E-07 48.6 9.9 78 148-231 15-95 (251)
350 PRK12938 acetyacetyl-CoA reduc 96.5 0.016 3.4E-07 49.4 8.7 83 149-231 2-91 (246)
351 PRK07066 3-hydroxybutyryl-CoA 96.5 0.17 3.6E-06 45.0 15.1 143 150-301 7-174 (321)
352 TIGR02415 23BDH acetoin reduct 96.5 0.036 7.8E-07 47.4 10.9 78 151-231 1-87 (254)
353 PRK06463 fabG 3-ketoacyl-(acyl 96.5 0.03 6.4E-07 48.0 10.3 80 149-231 6-89 (255)
354 PLN02781 Probable caffeoyl-CoA 96.5 0.028 6E-07 47.6 9.8 107 142-250 61-177 (234)
355 KOG4169 15-hydroxyprostaglandi 96.5 0.15 3.3E-06 42.1 13.3 79 150-230 5-92 (261)
356 TIGR03840 TMPT_Se_Te thiopurin 96.5 0.069 1.5E-06 44.5 11.8 101 148-253 33-154 (213)
357 PRK06997 enoyl-(acyl carrier p 96.5 0.019 4.1E-07 49.5 8.9 80 149-231 5-94 (260)
358 PRK14192 bifunctional 5,10-met 96.4 0.047 1E-06 47.5 11.0 78 148-254 157-234 (283)
359 TIGR02469 CbiT precorrin-6Y C5 96.4 0.062 1.3E-06 40.1 10.6 98 143-250 13-121 (124)
360 cd01065 NAD_bind_Shikimate_DH 96.4 0.047 1E-06 42.9 10.2 92 148-251 17-116 (155)
361 PRK05855 short chain dehydroge 96.4 0.03 6.6E-07 54.2 10.9 80 149-231 314-402 (582)
362 PRK08945 putative oxoacyl-(acy 96.4 0.021 4.5E-07 48.8 8.7 43 147-189 9-51 (247)
363 TIGR02622 CDP_4_6_dhtase CDP-g 96.4 0.022 4.8E-07 51.4 9.3 76 149-230 3-84 (349)
364 PLN03139 formate dehydrogenase 96.4 0.051 1.1E-06 49.4 11.3 88 149-251 198-291 (386)
365 PRK06077 fabG 3-ketoacyl-(acyl 96.4 0.036 7.8E-07 47.3 10.1 104 149-255 5-144 (252)
366 PRK12549 shikimate 5-dehydroge 96.4 0.046 1E-06 47.7 10.8 42 149-191 126-168 (284)
367 PRK08220 2,3-dihydroxybenzoate 96.4 0.034 7.4E-07 47.5 9.9 75 149-231 7-86 (252)
368 PRK05562 precorrin-2 dehydroge 96.4 0.047 1E-06 45.5 10.1 91 149-251 24-116 (223)
369 PRK07023 short chain dehydroge 96.4 0.03 6.4E-07 47.6 9.5 35 152-186 3-37 (243)
370 PF02737 3HCDH_N: 3-hydroxyacy 96.4 0.041 8.8E-07 44.5 9.7 38 152-190 1-38 (180)
371 PRK12745 3-ketoacyl-(acyl-carr 96.4 0.03 6.6E-07 47.9 9.6 78 151-231 3-90 (256)
372 PF03446 NAD_binding_2: NAD bi 96.3 0.024 5.3E-07 45.0 8.2 86 151-251 2-94 (163)
373 PRK12746 short chain dehydroge 96.3 0.053 1.1E-06 46.4 11.0 39 149-187 5-44 (254)
374 COG2226 UbiE Methylase involve 96.3 0.061 1.3E-06 45.3 10.8 103 143-256 45-161 (238)
375 PRK07417 arogenate dehydrogena 96.3 0.023 4.9E-07 49.6 8.6 86 152-251 2-91 (279)
376 PLN02657 3,8-divinyl protochlo 96.3 0.035 7.6E-07 51.0 10.2 106 145-254 55-184 (390)
377 PLN02589 caffeoyl-CoA O-methyl 96.3 0.05 1.1E-06 46.3 10.2 105 143-249 73-188 (247)
378 PRK12935 acetoacetyl-CoA reduc 96.3 0.043 9.4E-07 46.7 10.1 82 149-231 5-94 (247)
379 COG0569 TrkA K+ transport syst 96.3 0.033 7.1E-07 46.8 9.0 80 152-238 2-83 (225)
380 PRK08936 glucose-1-dehydrogena 96.3 0.047 1E-06 47.0 10.3 80 149-231 6-95 (261)
381 PRK09134 short chain dehydroge 96.3 0.047 1E-06 46.9 10.3 80 149-231 8-97 (258)
382 PRK08642 fabG 3-ketoacyl-(acyl 96.3 0.059 1.3E-06 46.0 10.8 81 149-230 4-90 (253)
383 PF02254 TrkA_N: TrkA-N domain 96.3 0.1 2.3E-06 38.6 10.8 91 153-250 1-95 (116)
384 PRK12744 short chain dehydroge 96.2 0.04 8.7E-07 47.3 9.6 80 149-231 7-99 (257)
385 KOG4022 Dihydropteridine reduc 96.2 0.026 5.6E-07 43.7 7.2 97 151-253 4-131 (236)
386 TIGR00080 pimt protein-L-isoas 96.2 0.1 2.3E-06 43.5 11.7 98 142-250 70-176 (215)
387 PRK12825 fabG 3-ketoacyl-(acyl 96.2 0.046 1E-06 46.4 9.8 37 149-185 5-41 (249)
388 PF13241 NAD_binding_7: Putati 96.2 0.019 4E-07 41.8 6.2 86 149-252 6-92 (103)
389 TIGR01829 AcAcCoA_reduct aceto 96.2 0.062 1.3E-06 45.5 10.5 78 151-231 1-88 (242)
390 PRK06171 sorbitol-6-phosphate 96.2 0.033 7.2E-07 48.0 8.9 77 149-231 8-87 (266)
391 PRK05599 hypothetical protein; 96.2 0.048 1E-06 46.6 9.7 76 152-231 2-87 (246)
392 PRK12550 shikimate 5-dehydroge 96.2 0.058 1.3E-06 46.7 10.1 69 146-231 118-188 (272)
393 PF10727 Rossmann-like: Rossma 96.2 0.048 1E-06 41.2 8.4 79 151-244 11-91 (127)
394 PRK12859 3-ketoacyl-(acyl-carr 96.2 0.062 1.3E-06 46.1 10.4 33 149-181 5-39 (256)
395 KOG1199 Short-chain alcohol de 96.2 0.052 1.1E-06 42.5 8.6 83 149-231 8-93 (260)
396 PRK07201 short chain dehydroge 96.2 0.046 9.9E-07 54.0 10.7 79 150-231 371-458 (657)
397 PRK06947 glucose-1-dehydrogena 96.1 0.056 1.2E-06 46.1 10.0 79 151-230 3-89 (248)
398 PRK07402 precorrin-6B methylas 96.1 0.16 3.4E-06 41.7 12.3 103 141-251 32-142 (196)
399 PRK14967 putative methyltransf 96.1 0.11 2.4E-06 43.7 11.5 95 144-250 31-158 (223)
400 KOG1200 Mitochondrial/plastidi 96.1 0.071 1.5E-06 42.8 9.4 80 150-231 14-100 (256)
401 PF02670 DXP_reductoisom: 1-de 96.1 0.055 1.2E-06 40.8 8.5 97 153-249 1-119 (129)
402 PF13561 adh_short_C2: Enoyl-( 96.1 0.14 3E-06 43.5 12.3 163 160-328 6-225 (241)
403 COG0373 HemA Glutamyl-tRNA red 96.1 0.12 2.7E-06 47.0 12.3 92 149-253 177-276 (414)
404 PRK07574 formate dehydrogenase 96.1 0.044 9.6E-07 49.8 9.5 88 149-251 191-284 (385)
405 PRK13255 thiopurine S-methyltr 96.1 0.11 2.3E-06 43.5 11.1 101 146-251 34-155 (218)
406 PRK09135 pteridine reductase; 96.1 0.079 1.7E-06 45.0 10.7 36 149-184 5-40 (249)
407 PRK12827 short chain dehydroge 96.1 0.067 1.5E-06 45.5 10.3 34 149-182 5-38 (249)
408 PRK09730 putative NAD(P)-bindi 96.1 0.062 1.4E-06 45.6 10.0 78 151-231 2-89 (247)
409 PRK06940 short chain dehydroge 96.1 0.072 1.6E-06 46.3 10.5 77 150-231 2-86 (275)
410 cd05311 NAD_bind_2_malic_enz N 96.1 0.14 3.1E-06 43.0 11.8 89 149-251 24-128 (226)
411 TIGR01318 gltD_gamma_fam gluta 96.1 0.035 7.5E-07 52.3 8.9 76 149-231 140-236 (467)
412 TIGR02632 RhaD_aldol-ADH rhamn 96.1 0.064 1.4E-06 53.0 11.1 80 149-231 413-503 (676)
413 PLN02986 cinnamyl-alcohol dehy 96.0 0.048 1.1E-06 48.6 9.4 40 149-188 4-43 (322)
414 PRK08618 ornithine cyclodeamin 96.0 0.25 5.5E-06 44.1 13.9 100 148-261 125-231 (325)
415 PRK08655 prephenate dehydrogen 96.0 0.034 7.3E-07 51.8 8.5 86 152-251 2-92 (437)
416 PF05368 NmrA: NmrA-like famil 96.0 0.055 1.2E-06 45.7 9.2 90 153-249 1-100 (233)
417 PRK06123 short chain dehydroge 96.0 0.067 1.5E-06 45.5 9.8 79 150-231 2-90 (248)
418 TIGR00715 precor6x_red precorr 96.0 0.025 5.4E-07 48.4 6.9 74 152-231 2-75 (256)
419 PRK11207 tellurite resistance 96.0 0.024 5.1E-07 46.7 6.6 98 143-251 24-134 (197)
420 PRK00107 gidB 16S rRNA methylt 96.0 0.074 1.6E-06 43.3 9.3 96 146-251 42-145 (187)
421 TIGR01809 Shik-DH-AROM shikima 95.9 0.037 8E-07 48.3 8.0 74 149-231 124-200 (282)
422 PLN02653 GDP-mannose 4,6-dehyd 95.9 0.032 7E-07 50.2 7.9 37 149-185 5-41 (340)
423 COG2227 UbiG 2-polyprenyl-3-me 95.9 0.064 1.4E-06 44.7 8.8 94 148-250 58-160 (243)
424 COG1648 CysG Siroheme synthase 95.9 0.13 2.9E-06 42.5 10.7 94 149-254 11-106 (210)
425 PRK12748 3-ketoacyl-(acyl-carr 95.9 0.079 1.7E-06 45.4 10.0 35 149-183 4-40 (256)
426 COG2519 GCD14 tRNA(1-methylade 95.9 0.071 1.5E-06 44.8 9.0 100 142-250 87-194 (256)
427 PF03435 Saccharop_dh: Sacchar 95.9 0.078 1.7E-06 48.6 10.4 90 153-249 1-96 (386)
428 PRK07041 short chain dehydroge 95.9 0.07 1.5E-06 44.9 9.4 75 154-231 1-79 (230)
429 PRK07069 short chain dehydroge 95.9 0.039 8.4E-07 47.1 7.9 77 152-231 1-89 (251)
430 PLN02989 cinnamyl-alcohol dehy 95.9 0.058 1.3E-06 48.1 9.3 39 149-187 4-42 (325)
431 PTZ00098 phosphoethanolamine N 95.9 0.13 2.8E-06 44.5 10.9 105 141-253 44-158 (263)
432 PF02558 ApbA: Ketopantoate re 95.9 0.0041 9E-08 48.7 1.5 91 153-251 1-101 (151)
433 PRK13243 glyoxylate reductase; 95.8 0.14 3E-06 45.9 11.3 87 149-252 149-241 (333)
434 PRK14103 trans-aconitate 2-met 95.8 0.08 1.7E-06 45.5 9.6 95 143-250 23-125 (255)
435 PRK14982 acyl-ACP reductase; P 95.8 0.19 4E-06 44.9 11.9 160 149-327 154-332 (340)
436 PRK12809 putative oxidoreducta 95.8 0.035 7.5E-07 54.5 8.0 75 149-231 309-405 (639)
437 PRK08317 hypothetical protein; 95.8 0.11 2.4E-06 43.8 10.4 99 143-252 13-125 (241)
438 PF02882 THF_DHG_CYH_C: Tetrah 95.8 0.12 2.7E-06 40.6 9.5 98 128-254 14-111 (160)
439 PRK01438 murD UDP-N-acetylmura 95.8 0.065 1.4E-06 50.7 9.6 69 149-231 15-88 (480)
440 PLN00015 protochlorophyllide r 95.8 0.064 1.4E-06 47.5 9.0 75 154-231 1-85 (308)
441 COG1090 Predicted nucleoside-d 95.8 0.021 4.6E-07 48.4 5.4 67 153-232 1-67 (297)
442 PLN02214 cinnamoyl-CoA reducta 95.7 0.092 2E-06 47.3 10.0 38 149-186 9-46 (342)
443 PRK05447 1-deoxy-D-xylulose 5- 95.7 0.11 2.3E-06 47.0 9.9 100 151-250 2-121 (385)
444 PLN02896 cinnamyl-alcohol dehy 95.7 0.12 2.5E-06 46.8 10.6 41 149-189 9-49 (353)
445 TIGR01472 gmd GDP-mannose 4,6- 95.7 0.061 1.3E-06 48.4 8.8 35 151-185 1-35 (343)
446 COG1028 FabG Dehydrogenases wi 95.7 0.072 1.6E-06 45.4 8.8 37 149-185 4-40 (251)
447 PLN02244 tocopherol O-methyltr 95.7 0.12 2.6E-06 46.5 10.4 94 148-252 117-224 (340)
448 PLN02545 3-hydroxybutyryl-CoA 95.7 0.52 1.1E-05 41.5 14.3 39 150-189 4-42 (295)
449 PLN00016 RNA-binding protein; 95.7 0.086 1.9E-06 48.2 9.6 95 150-252 52-165 (378)
450 PF08704 GCD14: tRNA methyltra 95.7 0.041 8.9E-07 46.7 6.8 106 141-251 32-146 (247)
451 TIGR03589 PseB UDP-N-acetylglu 95.7 0.11 2.4E-06 46.4 10.1 75 149-231 3-84 (324)
452 PRK14189 bifunctional 5,10-met 95.7 0.13 2.8E-06 44.6 9.9 96 129-254 137-233 (285)
453 PRK14191 bifunctional 5,10-met 95.6 0.21 4.6E-06 43.2 11.2 97 128-254 135-232 (285)
454 PF01370 Epimerase: NAD depend 95.6 0.044 9.5E-07 46.2 7.1 73 153-231 1-75 (236)
455 PRK14106 murD UDP-N-acetylmura 95.6 0.057 1.2E-06 50.6 8.5 70 149-231 4-78 (450)
456 PRK10792 bifunctional 5,10-met 95.6 0.16 3.4E-06 44.0 10.3 95 129-253 138-233 (285)
457 cd05212 NAD_bind_m-THF_DH_Cycl 95.6 0.2 4.3E-06 38.6 9.9 96 129-254 7-103 (140)
458 PRK12548 shikimate 5-dehydroge 95.6 0.14 3E-06 44.9 10.3 35 149-184 125-160 (289)
459 COG1179 Dinucleotide-utilizing 95.6 0.094 2E-06 43.7 8.4 33 149-182 29-62 (263)
460 TIGR00872 gnd_rel 6-phosphoglu 95.6 0.17 3.6E-06 44.6 10.8 43 152-195 2-44 (298)
461 KOG1663 O-methyltransferase [S 95.6 0.16 3.6E-06 41.9 9.7 108 143-250 67-182 (237)
462 PF03807 F420_oxidored: NADP o 95.6 0.033 7.2E-07 39.7 5.3 85 152-250 1-93 (96)
463 PLN03075 nicotianamine synthas 95.6 0.14 3.1E-06 44.5 10.0 95 149-251 123-233 (296)
464 PLN02366 spermidine synthase 95.6 0.13 2.8E-06 45.4 9.9 101 148-250 90-205 (308)
465 TIGR01500 sepiapter_red sepiap 95.6 0.12 2.7E-06 44.2 9.8 39 152-190 2-44 (256)
466 TIGR02685 pter_reduc_Leis pter 95.6 0.11 2.4E-06 44.8 9.5 81 151-231 2-94 (267)
467 PLN02662 cinnamyl-alcohol dehy 95.6 0.052 1.1E-06 48.3 7.6 38 149-186 3-40 (322)
468 KOG1502 Flavonol reductase/cin 95.5 0.085 1.8E-06 46.3 8.4 75 149-231 5-88 (327)
469 TIGR01830 3oxo_ACP_reduc 3-oxo 95.5 0.1 2.2E-06 44.0 9.0 76 153-231 1-86 (239)
470 PRK10258 biotin biosynthesis p 95.5 0.77 1.7E-05 39.3 14.4 97 145-253 38-142 (251)
471 PRK12824 acetoacetyl-CoA reduc 95.5 0.14 3E-06 43.4 9.7 34 151-184 3-36 (245)
472 TIGR03649 ergot_EASG ergot alk 95.5 0.048 1.1E-06 47.6 7.0 95 152-252 1-105 (285)
473 PRK12769 putative oxidoreducta 95.5 0.038 8.2E-07 54.4 6.9 75 149-231 326-422 (654)
474 PLN00203 glutamyl-tRNA reducta 95.5 0.14 3.1E-06 48.5 10.4 72 150-231 266-339 (519)
475 PRK14188 bifunctional 5,10-met 95.4 0.16 3.5E-06 44.3 9.9 95 128-254 136-233 (296)
476 PRK00312 pcm protein-L-isoaspa 95.4 0.42 9E-06 39.8 12.1 98 143-250 72-174 (212)
477 smart00822 PKS_KR This enzymat 95.4 0.14 3.1E-06 40.6 9.1 35 151-185 1-36 (180)
478 PRK12320 hypothetical protein; 95.4 0.68 1.5E-05 45.6 14.9 90 152-253 2-103 (699)
479 PRK15469 ghrA bifunctional gly 95.4 0.12 2.6E-06 45.7 9.1 87 149-252 135-227 (312)
480 PRK06522 2-dehydropantoate 2-r 95.4 0.075 1.6E-06 46.9 8.0 92 152-251 2-100 (304)
481 PRK06924 short chain dehydroge 95.4 0.16 3.6E-06 43.2 9.8 34 151-184 2-35 (251)
482 PRK08293 3-hydroxybutyryl-CoA 95.4 0.69 1.5E-05 40.5 13.8 40 151-191 4-43 (287)
483 PRK07340 ornithine cyclodeamin 95.3 0.23 5E-06 43.9 10.8 98 148-261 123-227 (304)
484 PLN02240 UDP-glucose 4-epimera 95.3 0.12 2.7E-06 46.5 9.4 34 150-183 5-38 (352)
485 PRK10637 cysG siroheme synthas 95.3 0.13 2.8E-06 48.3 9.6 93 149-253 11-105 (457)
486 PLN02686 cinnamoyl-CoA reducta 95.3 0.16 3.5E-06 46.2 10.1 44 148-191 51-94 (367)
487 PRK03659 glutathione-regulated 95.3 0.15 3.3E-06 49.6 10.4 93 151-250 401-497 (601)
488 TIGR01214 rmlD dTDP-4-dehydror 95.3 0.059 1.3E-06 47.1 6.9 60 152-231 1-60 (287)
489 PRK14618 NAD(P)H-dependent gly 95.3 0.17 3.7E-06 45.3 10.0 96 151-252 5-105 (328)
490 PRK09310 aroDE bifunctional 3- 95.3 0.15 3.2E-06 48.1 9.9 70 149-232 331-401 (477)
491 PRK09599 6-phosphogluconate de 95.3 0.21 4.5E-06 44.1 10.4 44 152-196 2-45 (301)
492 PRK14194 bifunctional 5,10-met 95.3 0.26 5.6E-06 43.1 10.5 95 128-253 137-233 (301)
493 PRK08309 short chain dehydroge 95.3 1.3 2.7E-05 35.7 15.7 90 152-245 2-99 (177)
494 PF07991 IlvN: Acetohydroxy ac 95.2 0.22 4.7E-06 39.0 8.9 86 149-250 3-94 (165)
495 PRK10669 putative cation:proto 95.2 0.18 4E-06 48.7 10.6 92 151-249 418-513 (558)
496 PRK07819 3-hydroxybutyryl-CoA 95.2 0.24 5.2E-06 43.3 10.4 38 151-189 6-43 (286)
497 PRK03562 glutathione-regulated 95.2 0.13 2.9E-06 50.2 9.5 93 150-249 400-496 (621)
498 PRK06550 fabG 3-ketoacyl-(acyl 95.2 0.095 2.1E-06 44.2 7.7 73 149-230 4-76 (235)
499 PRK07578 short chain dehydroge 95.2 0.091 2E-06 43.1 7.4 64 152-231 2-65 (199)
500 TIGR01777 yfcH conserved hypot 95.1 0.022 4.7E-07 49.8 3.8 67 153-231 1-67 (292)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.4e-60 Score=407.32 Aligned_cols=306 Identities=34% Similarity=0.551 Sum_probs=280.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.++++| +.+++++.|+ |+|+||+|+|.|+|+|++|++.+.|..+... +|+++|||.+|+|+
T Consensus 4 mkA~~~~~~~~p-----------l~i~e~~~p~-p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~ 70 (339)
T COG1064 4 MKAAVLKKFGQP-----------LEIEEVPVPE-PGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVV 70 (339)
T ss_pred eEEEEEccCCCC-----------ceEEeccCCC-CCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEE
Confidence 899999999987 5557899999 7999999999999999999999999998654 99999999999999
Q ss_pred EeCCCCCCCCCCCEEE----------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|++|++|++||||. ++..+|+|+||+++++++++++|+++++++||.+.|
T Consensus 71 ~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllC 150 (339)
T COG1064 71 EVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLC 150 (339)
T ss_pred EecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhc
Confidence 9999999999999992 455579999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
++.|.|++| +..++.||++|+|+|. |++|++++|+|+++|++|++++++++|.+.++++|++++++.++.+. .+.
T Consensus 151 aGiT~y~al-k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~---~~~ 225 (339)
T COG1064 151 AGITTYRAL-KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDA---LEA 225 (339)
T ss_pred CeeeEeeeh-hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchh---hHH
Confidence 999999999 4599999999999999 89999999999999999999999999999999999999999886655 333
Q ss_pred HHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC-CCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049 213 FLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS-GEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+.+ .+|+++||++...++.++++|+++|+++++|.+. ......+...++.+++++.|+..++ +.+
T Consensus 226 ~~~-----~~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---------~~d 291 (339)
T COG1064 226 VKE-----IADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---------RAD 291 (339)
T ss_pred hHh-----hCcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---------HHH
Confidence 332 2999999999777899999999999999999985 5555577778899999999999888 689
Q ss_pred HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
+++++++..+|++++.+.+.++++++++||+.|.+++..|+.||.+.
T Consensus 292 ~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 292 LEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 99999999999999998889999999999999999999999999874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=9.5e-56 Score=389.89 Aligned_cols=321 Identities=39% Similarity=0.557 Sum_probs=285.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++..++.|+. +..+|+|.|. |+++||+|||.++++|+.|...+.|.......+|+++|.|++|+|+
T Consensus 1 mka~~~~~~g~~~~---------l~~~e~~~P~-p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~ 70 (326)
T COG0604 1 MKAVVVEEFGGPEV---------LKVVEVPEPE-PGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVV 70 (326)
T ss_pred CeEEEEeccCCCce---------eEEEecCCCC-CCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEE
Confidence 99999999999864 6667999999 6999999999999999999999998744445689999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049 81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 157 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g 157 (347)
++|++|++|++||||+... .+|+|+||++++++.++++|+++|+++||+++..++|||+++....++++|++|||+|
T Consensus 71 avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~g 150 (326)
T COG0604 71 AVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHG 150 (326)
T ss_pred EeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 9999999999999999986 6799999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHH
Q 019049 158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 237 (347)
Q Consensus 158 ~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~ 237 (347)
|+|++|.+++|+|+++|+++++++.++++.++++++|+++++++.+.++ .+.+.+.+++.++|+|+|++|++.+..+
T Consensus 151 aaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~---~~~v~~~t~g~gvDvv~D~vG~~~~~~~ 227 (326)
T COG0604 151 AAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDF---VEQVRELTGGKGVDVVLDTVGGDTFAAS 227 (326)
T ss_pred CCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccH---HHHHHHHcCCCCceEEEECCCHHHHHHH
Confidence 9999999999999999988888888888888999999999999999888 7888889998899999999999999999
Q ss_pred HhccccCCEEEEEeecCC-CCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh
Q 019049 238 LKLLNWGAQILVIGFASG-EIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316 (347)
Q Consensus 238 ~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~ 316 (347)
+.+|+++|+++.+|..++ .....+...++.+++...+...... +++...+.++++.+++.+|.+++.+..+|++++
T Consensus 228 l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e 304 (326)
T COG0604 228 LAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DPEALAEALAELFDLLASGKLKPVIDRVYPLAE 304 (326)
T ss_pred HHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec---chHHHHHHHHHHHHHHHcCCCcceeccEechhh
Confidence 999999999999998874 3333445556777888888775543 335667889999999999999999999999999
Q ss_pred HHHHHHHHHc-CCcceeEEEEe
Q 019049 317 ANLAFSAIED-RKVIGKVMIAF 337 (347)
Q Consensus 317 ~~~a~~~~~~-~~~~gk~vv~~ 337 (347)
..++...... ++..||+|+++
T Consensus 305 ~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 305 APAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred hHHHHHHHHcccCCcceEEEeC
Confidence 6555554444 58899999974
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.1e-54 Score=343.55 Aligned_cols=325 Identities=32% Similarity=0.444 Sum_probs=302.7
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
|-+++++.|++++ +.+++.|.|. |.|+|++|+-.|+|+|..|.....|-+. +.+.|.+||.|.+|+|+.
T Consensus 10 k~i~v~e~Ggydv---------lk~ed~pv~~-papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvA 78 (336)
T KOG1197|consen 10 KCIVVTEFGGYDV---------LKLEDRPVPP-PAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVA 78 (336)
T ss_pred eEEEEeccCCcce---------EEEeeecCCC-CCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEE
Confidence 5678899999876 8889999999 7999999999999999999999999885 567899999999999999
Q ss_pred eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049 82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~ 161 (347)
+|++++++++||||.-..+.|.|+++..+|...+.++|+.+++++||++...++|||.-+++..++++|++||+|.++|+
T Consensus 79 vG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGG 158 (336)
T KOG1197|consen 79 VGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGG 158 (336)
T ss_pred ecCCccccccccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccc
Confidence 99999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049 162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 241 (347)
Q Consensus 162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 241 (347)
+|++++|+++..|++++++.++.+|++.+++.|+.+.++++.+++ ..++.++|++.|+|+++|.+|.+.+..++.+|
T Consensus 159 VGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~---v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~L 235 (336)
T KOG1197|consen 159 VGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDY---VDEVKKITNGKGVDAVYDSVGKDTFAKSLAAL 235 (336)
T ss_pred HHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhH---HHHHHhccCCCCceeeeccccchhhHHHHHHh
Confidence 999999999999999999999999999999999999999999999 88899999999999999999999999999999
Q ss_pred ccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHH
Q 019049 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF 321 (347)
Q Consensus 242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~ 321 (347)
++.|.+|.+|..++..+.++++++..+.+++.-.++..+. ..+..+.....+++.++.+|.+++.+.++|||++..+|+
T Consensus 236 k~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi-~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~ 314 (336)
T KOG1197|consen 236 KPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYI-DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAH 314 (336)
T ss_pred ccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhccc-CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHH
Confidence 9999999999999988889999998898888765444432 344556678889999999999999999999999999999
Q ss_pred HHHHcCCcceeEEEEeCCCC
Q 019049 322 SAIEDRKVIGKVMIAFDDMK 341 (347)
Q Consensus 322 ~~~~~~~~~gk~vv~~~~~~ 341 (347)
..+++++..||+++.+.++.
T Consensus 315 ~diesrktvGkvlLlp~~~~ 334 (336)
T KOG1197|consen 315 ADIESRKTVGKVLLLPGPEK 334 (336)
T ss_pred HHHHhhhccceEEEeCCccc
Confidence 99999999999999987764
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.9e-51 Score=338.94 Aligned_cols=313 Identities=25% Similarity=0.350 Sum_probs=267.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC--CCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK--PPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~ 78 (347)
|+|+++.+++.. .+ ++.|.|++++|+||+|++.+.|||++|+|.+....... ...|.++|||.+|+
T Consensus 5 ~~A~vl~g~~di-----------~i-~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGi 72 (354)
T KOG0024|consen 5 NLALVLRGKGDI-----------RI-EQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGI 72 (354)
T ss_pred cceeEEEccCce-----------eE-eeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccc
Confidence 789999999985 33 58999998899999999999999999999997665432 24699999999999
Q ss_pred EEEeCCCCCCCCCCCEEE------------------------Eec----CCCcceeeEeeeCCCeeeCCCCCCHHHHccC
Q 019049 79 VDAVGPNVSNFKVGDTVC------------------------GFA----ALGSFAQFIVADQSELFPVPKGCDLLAAAAL 130 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~------------------------~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 130 (347)
|.++|++|++|++||||. .|+ .+|++++|++.+++.|+|+|+++|++++|.+
T Consensus 73 V~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ 152 (354)
T KOG0024|consen 73 VEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALI 152 (354)
T ss_pred hhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence 999999999999999993 111 2499999999999999999999999999966
Q ss_pred cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049 131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 209 (347)
Q Consensus 131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 209 (347)
.+++.+|||. +.+++++|++|||+|+ |++|+++...|+.+|| +|++++..+.|++.++++|++.+.+.......+.
T Consensus 153 -ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 153 -EPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQE 229 (354)
T ss_pred -cchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHH
Confidence 7899999998 7899999999999999 9999999999999999 8999999999999999999999888776553222
Q ss_pred HHHHHHH-hcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchh
Q 019049 210 VKEFLKA-RKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHV 287 (347)
Q Consensus 210 ~~~~~~~-~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
..+..+. .+...+|+.|||+|. ..++.++..++.+|++++++...... .+|......+++.+.|++.+.
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~-~fpi~~v~~kE~~~~g~fry~-------- 300 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEI-QFPIIDVALKEVDLRGSFRYC-------- 300 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCcc-ccChhhhhhheeeeeeeeeec--------
Confidence 3333333 333569999999998 45688999999999988887665443 478888999999999988544
Q ss_pred HHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcc-eeEEEEeC
Q 019049 288 LEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVI-GKVMIAFD 338 (347)
Q Consensus 288 ~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~-gk~vv~~~ 338 (347)
...+...++++++|+++. .+++.|++++..+||+.+..++.. =|+++..+
T Consensus 301 -~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 301 -NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred -cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 358899999999999995 699999999999999999887742 37877654
No 5
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=9.7e-51 Score=341.11 Aligned_cols=309 Identities=27% Similarity=0.389 Sum_probs=272.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||++.+++++| +.++++.++. |++|||+||+.++|+|++|.....|..+. .+|.++|||.+|+|+
T Consensus 3 ~~aAV~~~~~~P-----------l~i~ei~l~~-P~~gEVlVri~AtGVCHTD~~~~~G~~p~--~~P~vLGHEgAGiVe 68 (366)
T COG1062 3 TRAAVAREAGKP-----------LEIEEVDLDP-PRAGEVLVRITATGVCHTDAHTLSGDDPE--GFPAVLGHEGAGIVE 68 (366)
T ss_pred ceEeeeecCCCC-----------eEEEEEecCC-CCCCeEEEEEEEeeccccchhhhcCCCCC--CCceecccccccEEE
Confidence 689999999998 6667899999 79999999999999999999999998875 389999999999999
Q ss_pred EeCCCCCCCCCCCEEEEe--------------------------------------c----------CCCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGF--------------------------------------A----------ALGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~--------------------------------------~----------~~g~~~~~~~~~~ 112 (347)
+||++|+.+++||+|+.. . ..++|++|.++++
T Consensus 69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~ 148 (366)
T COG1062 69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE 148 (366)
T ss_pred EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence 999999999999999411 0 0159999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
..++|++++.+++.++.+.|..+|.+.+....+++++|++|.|.|. |++|++++|-|+..|+ ++++++.+++|+++++
T Consensus 149 ~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~ 227 (366)
T COG1062 149 ISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK 227 (366)
T ss_pred cceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 9999999999999999 8999999999999999
Q ss_pred hcCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhc
Q 019049 192 SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVK 268 (347)
Q Consensus 192 ~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~ 268 (347)
++|+.+++|.++. +. .+.+.+.|++ ++|++|||+|. ..+++++.++.++|+.+.+|...... .+.+...+...
T Consensus 228 ~fGAT~~vn~~~~~~v---v~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g 303 (366)
T COG1062 228 KFGATHFVNPKEVDDV---VEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303 (366)
T ss_pred hcCCceeecchhhhhH---HHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence 9999999998876 35 6666777764 99999999998 77899999999999999999876432 22444445555
Q ss_pred ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.++.|++++.... +.++.+++++..+|+++. .+++.++|+|++|||+.|.+++.. |.||.
T Consensus 304 -r~~~Gs~~G~~~p------~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 304 -RVWKGSAFGGARP------RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred -ceEEEEeecCCcc------ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 9999999886432 368899999999999996 499999999999999999999988 55544
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-50 Score=332.06 Aligned_cols=310 Identities=25% Similarity=0.368 Sum_probs=266.2
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
++|.+..+++... ....+++.|+ |+++||+|++.|+|+|++|++.+.|..+. ..+|.++|||.+|+|++
T Consensus 11 ~g~~~~~~~G~l~---------p~~~~~~~~~-~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 11 FGWAARDPSGVLS---------PEVFSFPVRE-PGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVK 79 (360)
T ss_pred EEEEEECCCCCCC---------cceeEcCCCC-CCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEE
Confidence 4677777776421 2225788899 79999999999999999999999999887 67999999999999999
Q ss_pred eCCCCCCCCCCCEE------------------------------EEecCC-----CcceeeEeeeCCCeeeCCCCCCHHH
Q 019049 82 VGPNVSNFKVGDTV------------------------------CGFAAL-----GSFAQFIVADQSELFPVPKGCDLLA 126 (347)
Q Consensus 82 vG~~v~~~~~Gd~V------------------------------~~~~~~-----g~~~~~~~~~~~~~~~~p~~~~~~~ 126 (347)
+|++|++|++|||| .++..+ |+|++|+++++.++++||+++++++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~ 159 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS 159 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence 99999999999999 122223 5699999999999999999999999
Q ss_pred HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcEEEeCC-CC
Q 019049 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLS-NE 204 (347)
Q Consensus 127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~v~~~~-~~ 204 (347)
||.+.|+..|+|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|++++++. .|.+.++.+||+..++.. +.
T Consensus 160 aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 160 AAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred ccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 999999999999999 6788899999999999 6699999999999999999999988 455666789999999987 55
Q ss_pred CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049 205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 284 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
+. .+++...++ .++|-+.+. ....+..++.+++++|++|++|.+.... .++...+..+.+++.|+..++
T Consensus 238 d~---~~~~~~~~d-g~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~~~-~~~~~~lil~~~~I~GS~vG~----- 306 (360)
T KOG0023|consen 238 DI---MKAIMKTTD-GGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEKPL-KLDTFPLILGRKSIKGSIVGS----- 306 (360)
T ss_pred HH---HHHHHHhhc-Ccceeeeec-cccchHHHHHHhhcCCEEEEEeCcCCcc-cccchhhhcccEEEEeecccc-----
Confidence 55 666666554 355666555 4467889999999999999999988743 356667788999999999988
Q ss_pred chhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCC
Q 019049 285 PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDM 340 (347)
Q Consensus 285 ~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~ 340 (347)
+...++.+++.+++.++..+ ...+++++++||++|.+++..++.|+.++.+
T Consensus 307 ----~ket~E~Ldf~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~~ 357 (360)
T KOG0023|consen 307 ----RKETQEALDFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVDVSKS 357 (360)
T ss_pred ----HHHHHHHHHHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEEcccc
Confidence 68889999999999999776 4789999999999999999999999998654
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=4.6e-48 Score=351.22 Aligned_cols=318 Identities=25% Similarity=0.388 Sum_probs=268.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.++|.+.- +.. +.. +.++++|.|+ |+++||+|||.++++|++|++.+.|.++ ..+|.++|||++|+|+
T Consensus 1 mka~~~~~~g~~~~-~~~-~~~-l~~~~~~~P~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~GhE~~G~V~ 74 (371)
T cd08281 1 MRAAVLRETGAPTP-YAD-SRP-LVIEEVELDP-PGPGEVLVKIAAAGLCHSDLSVINGDRP--RPLPMALGHEAAGVVV 74 (371)
T ss_pred CcceEEEecccccc-ccc-CCC-ceEEEeecCC-CCCCeEEEEEEEEeeCccchHhhcCCCC--CCCCccCCccceeEEE
Confidence 99999999886410 000 011 4456899999 5999999999999999999999988653 3468999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~ 112 (347)
++|++++++++||+|+... ..|+|++|+++++
T Consensus 75 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~ 154 (371)
T cd08281 75 EVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSR 154 (371)
T ss_pred EeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecc
Confidence 9999999999999997531 0268999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
+.++++|+++++++|+.+++++.+||+++...+++++|++|||.|+ |++|++++|+|+..|+ +|++++.+++|++.++
T Consensus 155 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~ 233 (371)
T cd08281 155 RSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR 233 (371)
T ss_pred cceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999878889999999999997 9999999999999999 6999999999999999
Q ss_pred hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcc
Q 019049 192 SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKN 269 (347)
Q Consensus 192 ~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 269 (347)
++|+++++++.+.++ .+.+.+.+.+ ++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.++
T Consensus 234 ~~Ga~~~i~~~~~~~---~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 234 ELGATATVNAGDPNA---VEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HcCCceEeCCCchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 999999999877666 5566666665 89999999987 5778899999999999999876432 2234555678899
Q ss_pred eEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
+++.+++...+. ..+.++++++++.+|++++ .++++|+|+|+++||+.+.+++..||+|+
T Consensus 310 ~~i~g~~~~~~~------~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 310 RTLKGSYMGSCV------PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CEEEEEecCCCC------hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 999998765432 1356788999999999985 48899999999999999999998888763
No 8
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.9e-48 Score=318.24 Aligned_cols=313 Identities=23% Similarity=0.361 Sum_probs=270.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||++.+++++| +.+|++.++. |+.+||+|++.++++|++|...+.|..+ ...+|.++|||.+|+|+
T Consensus 8 CKAAV~w~a~~P-----------L~IEei~V~p-Pka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVE 74 (375)
T KOG0022|consen 8 CKAAVAWEAGKP-----------LVIEEIEVAP-PKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVE 74 (375)
T ss_pred EeEeeeccCCCC-----------eeEEEEEeCC-CCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEE
Confidence 689999999999 8889999888 7999999999999999999999998763 34689999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049 81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD 111 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~ 111 (347)
++|.+|+++++||+|+... ...+|+||.+++
T Consensus 75 SvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~ 154 (375)
T KOG0022|consen 75 SVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVD 154 (375)
T ss_pred EecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEee
Confidence 9999999999999994110 015999999999
Q ss_pred CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL 190 (347)
Q Consensus 112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~ 190 (347)
...+++|++..+++.++.+.+...|+|.|....++++||+++.|+|- |++|+++++-|+..|| +++.++-+++|.+.+
T Consensus 155 ~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a 233 (375)
T KOG0022|consen 155 DISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKA 233 (375)
T ss_pred cceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 9999999999999999 999999999999999
Q ss_pred HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhhhc
Q 019049 191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVK 268 (347)
Q Consensus 191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 268 (347)
+++|+.+++|..+..- ...+.+.+.|+ +++|+.|||+|. ..+.+++.+...+ |+-+.+|..............+..
T Consensus 234 k~fGaTe~iNp~d~~~-~i~evi~EmTd-gGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~ 311 (375)
T KOG0022|consen 234 KEFGATEFINPKDLKK-PIQEVIIEMTD-GGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT 311 (375)
T ss_pred HhcCcceecChhhccc-cHHHHHHHHhc-CCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc
Confidence 9999999998773221 23555666675 799999999998 6778999999988 999999987654332122223455
Q ss_pred ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.++.|+.++.|.. ++++..+++...+++++. .+++.++|+++++||+.|.+++.. +.|+.
T Consensus 312 GR~~~Gs~FGG~K~------~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 312 GRTWKGSAFGGFKS------KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred ccEEEEEecccccc------hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 88899998888643 578899999999999986 499999999999999999999988 66654
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8e-47 Score=339.64 Aligned_cols=307 Identities=25% Similarity=0.396 Sum_probs=261.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++. +.+++++.|. |+++||+|++.++++|++|++.+.+.+.....+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~ 67 (339)
T cd08239 1 MRGAVFPGDRT------------VELREFPVPV-PGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVV 67 (339)
T ss_pred CeEEEEecCCc------------eEEEecCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEE
Confidence 99999987654 3346899999 5999999999999999999998877643323458899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|++++++++||+|+.+. .+|+|++|++++.+.++++|+++++++|+.+++
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~ 147 (339)
T cd08239 68 AVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLC 147 (339)
T ss_pred EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcc
Confidence 9999999999999997542 258999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 211 (347)
++.|||+++ ..+++.+|++|||+|+ |++|++++|+|+.+|++ |++++++++|++.++++|+++++++.+.+ .+
T Consensus 148 ~~~ta~~~l-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~----~~ 221 (339)
T cd08239 148 GIGTAYHAL-RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD----VQ 221 (339)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch----HH
Confidence 999999998 5678899999999987 99999999999999998 99999999999999999999999876543 34
Q ss_pred HHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049 212 EFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290 (347)
Q Consensus 212 ~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.+.+.+.+.++|++|||+|+.. +..++++++++|+++.+|..... .......++.+++++.+++... .+
T Consensus 222 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~ 291 (339)
T cd08239 222 EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFS---------VP 291 (339)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCC---------HH
Confidence 4556666678999999999864 47889999999999999875432 2122345678899999887544 36
Q ss_pred HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.++++++++.+|.+++ .++++|+++++++||+.+.++. .||+|++|
T Consensus 292 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 292 DMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 7889999999999874 5889999999999999998875 68999875
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=9.7e-47 Score=341.05 Aligned_cols=311 Identities=23% Similarity=0.355 Sum_probs=267.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.++|++ ..++++|.|. |+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+
T Consensus 2 mka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~gi~~~D~~~~~g~~~--~~~p~i~G~e~~G~V~ 67 (358)
T TIGR03451 2 VRGVIARSKGAP-----------VELETIVVPD-PGPGEVIVDIQACGVCHTDLHYREGGIN--DEFPFLLGHEAAGVVE 67 (358)
T ss_pred cEEEEEccCCCC-----------CEEEEEECCC-CCCCeEEEEEEEEeecHHHHHHhcCCcc--ccCCcccccceEEEEE
Confidence 999999999976 4457899999 5999999999999999999999888653 3468899999999999
Q ss_pred EeCCCCCCCCCCCEEEEe----------------------------------------cCCCcceeeEeeeCCCeeeCCC
Q 019049 81 AVGPNVSNFKVGDTVCGF----------------------------------------AALGSFAQFIVADQSELFPVPK 120 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~----------------------------------------~~~g~~~~~~~~~~~~~~~~p~ 120 (347)
++|+++++|++||+|+.. ...|+|+||+.+++..++++|+
T Consensus 68 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 68 AVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred EeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCC
Confidence 999999999999999751 0248999999999999999999
Q ss_pred CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEE
Q 019049 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV 199 (347)
Q Consensus 121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~ 199 (347)
++++++|+.+++.+.++|+++...+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++.++++|+++++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i 226 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTV 226 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence 99999999999999999998877889999999999986 9999999999999999 599999999999999999999999
Q ss_pred eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhcceEEEEEEe
Q 019049 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHGLYW 277 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 277 (347)
++.+.++ .+.+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|...... ..++...++.+++++.+++.
T Consensus 227 ~~~~~~~---~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 227 NSSGTDP---VEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred cCCCcCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 9877666 5667777777789999999997 56788999999999999999765321 23454567788999988764
Q ss_pred ccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 278 GSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.... + .+.++++++++.+|++++ .++++|+++|+++||+.+.+++.. |+++.
T Consensus 304 ~~~~---~---~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 304 GDCL---P---ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred CCCC---c---HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 3211 1 366888999999999985 488999999999999999988776 76664
No 11
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.2e-46 Score=334.62 Aligned_cols=317 Identities=24% Similarity=0.369 Sum_probs=268.9
Q ss_pred CceEEecccCCC---CccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeE
Q 019049 1 MEALVCRKLGDP---TVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSG 77 (347)
Q Consensus 1 m~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G 77 (347)
|||+++.++|.| +. ..++++|.|. |+++||+|++.++++|++|++...|.++....+|.++|||++|
T Consensus 1 m~a~~~~~~~~~~~~~~---------~~~~~~~~p~-~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G 70 (324)
T cd08291 1 MKALLLEEYGKPLEVKE---------LSLPEPEVPE-PGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSG 70 (324)
T ss_pred CeEEEEeecCCCccccE---------EEecccCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEE
Confidence 999999998865 22 4456889999 5999999999999999999999988765444578899999999
Q ss_pred EEEEeCCCCCC-CCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 78 TVDAVGPNVSN-FKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 78 ~V~~vG~~v~~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
+|+++|+++.+ |++||+|+++.. +|+|++|++++++.++++|+++++++++.++..+.|||..+ ....+ ++++++|
T Consensus 71 ~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv 148 (324)
T cd08291 71 TVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVV 148 (324)
T ss_pred EEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEE
Confidence 99999999996 999999998764 39999999999999999999999999998888899998544 55555 5556666
Q ss_pred e-cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049 156 L-GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234 (347)
Q Consensus 156 ~-g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 234 (347)
+ +++|++|++++|+|+.+|++|+++++++++++.++++|+++++++...++ .+.+.+.+.+.++|++|||+|+...
T Consensus 149 ~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~v~~~~~~~~~d~vid~~g~~~~ 225 (324)
T cd08291 149 HTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDF---LEDLKELIAKLNATIFFDAVGGGLT 225 (324)
T ss_pred EccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccH---HHHHHHHhCCCCCcEEEECCCcHHH
Confidence 6 78899999999999999999999999999999999999999999887776 5667777777789999999999888
Q ss_pred HHHHhccccCCEEEEEeecCCCCC-CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049 235 KESLKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYS 313 (347)
Q Consensus 235 ~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~ 313 (347)
...+++++++|+++.+|....... ..+...++.+++++.+++...+.... ..+.++++++++. +.+++.++++|+
T Consensus 226 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~i~~~~~ 301 (324)
T cd08291 226 GQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKL---GPEVVKKLKKLVK-TELKTTFASRYP 301 (324)
T ss_pred HHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhccc---CHHHHHHHHHHHh-CccccceeeEEc
Confidence 888999999999999987654322 24445667889999998876543221 2467888888888 999988999999
Q ss_pred hhhHHHHHHHHHcCCcceeEEEE
Q 019049 314 PSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 314 ~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
|+|+++||+.+.++...||+++.
T Consensus 302 l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 302 LALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHHHHhCCCCCeEEeC
Confidence 99999999999999999999873
No 12
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.4e-46 Score=339.10 Aligned_cols=312 Identities=21% Similarity=0.351 Sum_probs=261.8
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++++ +.+++++.|. |+++||+|+|.++|+|++|++.+.|..+....+|.++|||++|+|+
T Consensus 11 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~ 78 (381)
T PLN02740 11 CKAAVAWGPGEP-----------LVMEEIRVDP-PQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVE 78 (381)
T ss_pred eEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEE
Confidence 899999888764 3346899999 5999999999999999999999988765444678999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------------------------------CCCcceeeEe
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------------------------------ALGSFAQFIV 109 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------------------------------~~g~~~~~~~ 109 (347)
++|+++++|++||||+... .+|+|+||++
T Consensus 79 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~ 158 (381)
T PLN02740 79 SVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTV 158 (381)
T ss_pred EeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEE
Confidence 9999999999999997531 1489999999
Q ss_pred eeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH
Q 019049 110 ADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK 188 (347)
Q Consensus 110 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~ 188 (347)
++.+.++++|+++++++++.+++++.|||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++
T Consensus 159 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 159 LDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred EehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 9999999999999999999999999999998877889999999999997 9999999999999999 6999999999999
Q ss_pred HHHhcCCcEEEeCCCCC--chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchh
Q 019049 189 FLKSLGVDHVVDLSNES--VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPAN 263 (347)
Q Consensus 189 ~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~ 263 (347)
.++++|++++++..+.+ + .+.+.+.+.+ ++|++||++|. ..+..++.+++++ |+++.+|...... ..++..
T Consensus 238 ~a~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~ 313 (381)
T PLN02740 238 KGKEMGITDFINPKDSDKPV---HERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPM 313 (381)
T ss_pred HHHHcCCcEEEecccccchH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHH
Confidence 99999999999876532 4 4455556655 89999999997 5678899999996 9999999765321 112222
Q ss_pred HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 264 IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
. +.++.++.|+..+.+.. ...+.++++++.+|.+++ .++++|+|+|+++|++.+.+++.. |++|++
T Consensus 314 ~-~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~-k~~~~~ 381 (381)
T PLN02740 314 E-LFDGRSITGSVFGDFKG------KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKAL-RCLLHL 381 (381)
T ss_pred H-HhcCCeEEEEecCCCCc------HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCce-eEEEeC
Confidence 2 34688898887654321 246788999999999875 588999999999999999888764 888863
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.3e-45 Score=335.04 Aligned_cols=310 Identities=23% Similarity=0.316 Sum_probs=260.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.++++. +.++++|.|. |+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+
T Consensus 13 mka~~~~~~~~~-----------~~~~e~~~P~-~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~ 76 (378)
T PLN02827 13 CRAAVAWGAGEA-----------LVMEEVEVSP-PQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVE 76 (378)
T ss_pred eEEEEEecCCCC-----------ceEEEeecCC-CCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEE
Confidence 899999876643 4456899999 599999999999999999999887642 457899999999999
Q ss_pred EeCCCCCCCCCCCEEEEecC------------------------------------------------CCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGFAA------------------------------------------------LGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~ 112 (347)
++|+++++|++||+|+.... .|+|++|+.+++
T Consensus 77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~ 156 (378)
T PLN02827 77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
T ss_pred EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence 99999999999999986521 279999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
+.++++|+++++++++.+++++.++|+++...+++++|++|||+|+ |++|++++|+|+.+|+ .|++++.+++|.+.++
T Consensus 157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~ 235 (378)
T PLN02827 157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK 235 (378)
T ss_pred hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 9999999999999999998899999988777788999999999997 9999999999999999 5888888999999999
Q ss_pred hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccC-CEEEEEeecCCCCCCcchhHhhh
Q 019049 192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGEIPVIPANIALV 267 (347)
Q Consensus 192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~ 267 (347)
++|+++++++.+. ++ .+.+.+.+.+ ++|++|||+|.+ .+..++++++++ |+++.+|.............++.
T Consensus 236 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 236 TFGVTDFINPNDLSEPI---QQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HcCCcEEEcccccchHH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 9999999987652 33 3445555654 899999999985 688899999998 99999997654322122234677
Q ss_pred cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049 268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
+++++.|+....+.. ...++++++++.+|++++ .++++|+|+++++||+.+.+++. +|+||.+.
T Consensus 312 ~~~~i~g~~~~~~~~------~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 312 SGRTLKGSLFGGWKP------KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred cCceEEeeecCCCch------hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 999999987654321 356788999999999997 68999999999999999998887 59999774
No 14
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.1e-45 Score=331.18 Aligned_cols=311 Identities=23% Similarity=0.351 Sum_probs=255.8
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..+++. ..++++|.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus 2 ~~a~~~~~~~~~-----------l~~~~~~~P~-~~~~eVlI~v~a~gi~~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~ 68 (368)
T TIGR02818 2 SRAAVAWAAGQP-----------LKIEEVDVEM-PQKGEVLVRIVATGVCHTDAFTLSGADPE-GVFPVILGHEGAGIVE 68 (368)
T ss_pred ceEEEEecCCCC-----------eEEEEecCCC-CCCCeEEEEEEEecccHHHHHHhcCCCCC-CCCCeeeccccEEEEE
Confidence 899999887764 4446889999 59999999999999999999999887643 3568999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~ 112 (347)
++|+++++|++||||+... ..|+|+||+++++
T Consensus 69 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~ 148 (368)
T TIGR02818 69 AVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPE 148 (368)
T ss_pred EECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEech
Confidence 9999999999999997531 0268999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
+.++++|+++++++++.+++++.+||+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|++++.+++|++.++
T Consensus 149 ~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~ 227 (368)
T TIGR02818 149 ISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK 227 (368)
T ss_pred hheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999878889999999999987 9999999999999999 7999999999999999
Q ss_pred hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchhHhh
Q 019049 192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPANIAL 266 (347)
Q Consensus 192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~ 266 (347)
++|+++++++.+. ++ .+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|...... .......++
T Consensus 228 ~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~ 303 (368)
T TIGR02818 228 KLGATDCVNPNDYDKPI---QEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV 303 (368)
T ss_pred HhCCCeEEcccccchhH---HHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence 9999999987642 23 3445566665 89999999997 5678899999886 9999999764221 112222222
Q ss_pred hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++..+.++...... ....+.++++++.+|++++ .++++|+|+++++||+.+.+++. .|+++.|
T Consensus 304 -~~~~~~g~~~~~~~------~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 304 -TGRVWRGSAFGGVK------GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred -ccceEEEeeccCCC------cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 33456665443211 1356888999999999874 58999999999999999988765 5998875
No 15
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=5.2e-45 Score=326.05 Aligned_cols=323 Identities=28% Similarity=0.391 Sum_probs=278.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.|. ....++++|.|. +.++||+|+|.++++|++|++.+.|.++.....|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 71 (324)
T cd08292 1 MRAAVHTQFGDPA--------DVLEIGEVPKPT-PGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVD 71 (324)
T ss_pred CeeEEEccCCChh--------HeEEEeecCCCC-CCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEE
Confidence 9999999887651 124457899999 4999999999999999999999888765334468899999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
++|++++++++||+|+++...|+|++|+.+++..++++|+++++++++.++....++|+++ ..+++++|++|||+|++|
T Consensus 72 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g 150 (324)
T cd08292 72 AVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGG 150 (324)
T ss_pred EeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEccccc
Confidence 9999999999999999987569999999999999999999999999999999999999988 568999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 240 (347)
.+|++++|+|+.+|+++++++.++++.+.++++|+++++++.+.++ .+.+.+.+.+.++|++|||+|+.....++++
T Consensus 151 ~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 227 (324)
T cd08292 151 AVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGW---QDKVREAAGGAPISVALDSVGGKLAGELLSL 227 (324)
T ss_pred HHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchH---HHHHHHHhCCCCCcEEEECCCChhHHHHHHh
Confidence 9999999999999999999999999999998899999998877666 5667777888899999999999888899999
Q ss_pred cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC-chhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR-PHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319 (347)
Q Consensus 241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~ 319 (347)
++++|+++.+|.........+....+.++.++.++....+.... |....+.++.+++++.+|.+++.+.+.|+++++.+
T Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~ 307 (324)
T cd08292 228 LGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAK 307 (324)
T ss_pred hcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHH
Confidence 99999999998653322223434456789999998876654443 55566788999999999999976788999999999
Q ss_pred HHHHHHcCCcceeEEEE
Q 019049 320 AFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 320 a~~~~~~~~~~gk~vv~ 336 (347)
|++.+.++...||++++
T Consensus 308 a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 308 AAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHcCCCCceEEeC
Confidence 99999988888898863
No 16
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.6e-45 Score=326.44 Aligned_cols=299 Identities=23% Similarity=0.287 Sum_probs=251.5
Q ss_pred eEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEe
Q 019049 3 ALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAV 82 (347)
Q Consensus 3 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~v 82 (347)
|+.+.++|.++. ..+.++++|.|. |+++||+|||.++++|++|++.+.|.++.. .+|.++|||++|+|+++
T Consensus 1 ~~~~~~~g~~~~-------~~l~~~~~p~P~-~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~v 71 (329)
T TIGR02822 1 AWEVERPGPIED-------GPLRFVERPVPR-PGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGR 71 (329)
T ss_pred CeeeecCCcCCC-------CCceEEeCCCCC-CCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEE
Confidence 456667765521 124456899999 699999999999999999999998876432 34789999999999999
Q ss_pred CCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchH
Q 019049 83 GPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAF 134 (347)
Q Consensus 83 G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~ 134 (347)
|+++++|++||+|+.. ..+|+|++|+++++..++++|+++++++++.+++.+
T Consensus 72 G~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~ 151 (329)
T TIGR02822 72 GADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAG 151 (329)
T ss_pred CCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccc
Confidence 9999999999999631 125899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHH
Q 019049 135 GTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFL 214 (347)
Q Consensus 135 ~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 214 (347)
.|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|++++++++|++.++++|++++++..+..
T Consensus 152 ~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~--------- 220 (329)
T TIGR02822 152 IIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP--------- 220 (329)
T ss_pred hHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC---------
Confidence 99999984 688999999999998 9999999999999999999999999999999999999998754321
Q ss_pred HHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049 215 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293 (347)
Q Consensus 215 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
..++|+++++.+. ..+..++++++++|+++.+|........++...++.+++++.++.... ++.+.
T Consensus 221 ----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~ 287 (329)
T TIGR02822 221 ----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNT---------RADAR 287 (329)
T ss_pred ----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCC---------HHHHH
Confidence 1368988888765 567889999999999999997543333345556678888888876432 35678
Q ss_pred HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
++++++.+|++++ ++++|+|+|+++||+.+.+++..||+|+
T Consensus 288 ~~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 288 EFLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 8899999999985 5789999999999999999999999987
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.9e-45 Score=330.01 Aligned_cols=306 Identities=24% Similarity=0.286 Sum_probs=251.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++.+...+.++. +...+++.|. |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus 11 ~~~~~~~~~~~~~~---------l~~~~~~~p~-~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~ 79 (360)
T PLN02586 11 QKAFGWAARDPSGV---------LSPFHFSRRE-NGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVT 79 (360)
T ss_pred hheeEEEecCCCCC---------ceEEeecCCC-CCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEE
Confidence 55555555554322 3345788888 59999999999999999999998876542 3568899999999999
Q ss_pred EeCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049 81 AVGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL 125 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~ 125 (347)
++|+++++|++||+|+.. ..+|+|+||++++++.++++|++++++
T Consensus 80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~ 159 (360)
T PLN02586 80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLD 159 (360)
T ss_pred EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHH
Confidence 999999999999999631 125899999999999999999999999
Q ss_pred HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCC
Q 019049 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNE 204 (347)
Q Consensus 126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~ 204 (347)
+++.+++.+.|+|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.+++++ +.++++|++++++..+.
T Consensus 160 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~ 238 (360)
T PLN02586 160 AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP 238 (360)
T ss_pred HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH
Confidence 999999999999999866677789999999887 9999999999999999999888777654 45578999999876542
Q ss_pred CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049 205 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH 283 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
+.+.+.++ ++|++||++|. ..+..++++++++|+++.+|..... ..++...++.++..+.++..+.
T Consensus 239 ------~~~~~~~~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~---- 305 (360)
T PLN02586 239 ------EKMKAAIG--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP-LELPIFPLVLGRKLVGGSDIGG---- 305 (360)
T ss_pred ------HHHHhhcC--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC-CccCHHHHHhCCeEEEEcCcCC----
Confidence 12333332 69999999997 4678899999999999999865433 2345555677788877776543
Q ss_pred CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++++++++.+|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus 306 -----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 306 -----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred -----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 35688999999999999766 5899999999999999999889999998
No 18
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2e-44 Score=326.31 Aligned_cols=291 Identities=24% Similarity=0.314 Sum_probs=245.5
Q ss_pred eeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE-e----c
Q 019049 25 LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG-F----A 99 (347)
Q Consensus 25 ~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~----~ 99 (347)
...+++.|. |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++||+|+. . +
T Consensus 20 ~~~~~~~p~-~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~c 97 (375)
T PLN02178 20 SPFHFSRRE-NGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSC 97 (375)
T ss_pred eEEeecCCC-CCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCC
Confidence 335788888 69999999999999999999999886532 246889999999999999999999999999963 1 1
Q ss_pred ------------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcC-CC
Q 019049 100 ------------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ-LS 148 (347)
Q Consensus 100 ------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~-~~ 148 (347)
.+|+|+||++++++.++++|+++++++++++++...|+|+++..... .+
T Consensus 98 g~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~ 177 (375)
T PLN02178 98 QSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKE 177 (375)
T ss_pred CCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCC
Confidence 15899999999999999999999999999999999999999854433 36
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
+|++|+|.|+ |++|++++|+|+.+|++|++++.++++ .+.++++|+++++++.+. +.+.+.++ ++|++||
T Consensus 178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~------~~v~~~~~--~~D~vid 248 (375)
T PLN02178 178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS------QKMKEAVG--TMDFIID 248 (375)
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH------HHHHHhhC--CCcEEEE
Confidence 8999999987 999999999999999999999877654 677889999999876542 23334442 6999999
Q ss_pred CCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049 228 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 306 (347)
Q Consensus 228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 306 (347)
|+|.+ .+..++++++++|+++.+|..... ..++...++.+++++.|+.... .+.+.++++++.+|++++
T Consensus 249 ~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~-~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~l~~~g~i~~ 318 (375)
T PLN02178 249 TVSAEHALLPLFSLLKVSGKLVALGLPEKP-LDLPIFPLVLGRKMVGGSQIGG---------MKETQEMLEFCAKHKIVS 318 (375)
T ss_pred CCCcHHHHHHHHHhhcCCCEEEEEccCCCC-CccCHHHHHhCCeEEEEeCccC---------HHHHHHHHHHHHhCCCcc
Confidence 99986 678999999999999999876433 2345566778899999877544 356888999999999998
Q ss_pred eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 307 HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 307 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+ +.|+|+++++||+.+.+++..||+|+++
T Consensus 319 ~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 319 DI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred cE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 77 5799999999999999999899999998
No 19
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6.8e-45 Score=327.14 Aligned_cols=301 Identities=20% Similarity=0.304 Sum_probs=248.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCCC-CCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQE-KPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~~-~~~~p~~~G~e~~G~ 78 (347)
||++++..++..+ +++.+.| + +++||+|||.++|+|++|++.+. |..+. ...+|.++|||++|+
T Consensus 5 ~~~~~~~~~~~~~------------~~~~~~p-~-~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~ 70 (343)
T PRK09880 5 TQSCVVAGKKDVA------------VTEQEIE-W-NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGK 70 (343)
T ss_pred ceEEEEecCCceE------------EEecCCC-C-CCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEE
Confidence 6788888777643 2677777 3 78999999999999999999875 33222 235689999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEe--------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHH
Q 019049 79 VDAVGPNVSNFKVGDTVCGF--------------------------------AALGSFAQFIVADQSELFPVPKGCDLLA 126 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 126 (347)
|+++ ++++|++||+|+.. ..+|+|+||++++++.++++|+++++++
T Consensus 71 V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~ 148 (343)
T PRK09880 71 IVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKV 148 (343)
T ss_pred EEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHH
Confidence 9999 78899999999742 1259999999999999999999999987
Q ss_pred HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCC
Q 019049 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES 205 (347)
Q Consensus 127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 205 (347)
++ +..+++++|+++. .....+|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.++++|+++++++++.+
T Consensus 149 aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~ 225 (343)
T PRK09880 149 MA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD 225 (343)
T ss_pred HH-hhcHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc
Confidence 65 4578899999984 456668999999997 9999999999999999 699999999999999999999999987655
Q ss_pred chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049 206 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 284 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
+ .++... .+++|++|||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.++...
T Consensus 226 ~----~~~~~~--~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~------ 292 (343)
T PRK09880 226 L----DHYKAE--KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAP-PEFPMMTLIVKEISLKGSFRF------ 292 (343)
T ss_pred H----HHHhcc--CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHHhCCcEEEEEeec------
Confidence 3 223322 2369999999997 4678899999999999999975432 345666778899999987632
Q ss_pred chhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 285 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 285 ~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++++++++.+|++++ .++++|+++|+++||+.+.+++..||+++.+
T Consensus 293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 246788999999999986 5789999999999999999988889999864
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.9e-44 Score=327.14 Aligned_cols=310 Identities=23% Similarity=0.356 Sum_probs=255.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++++ ..++++|.|. |+++||+||+.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus 3 ~~a~~~~~~~~~-----------~~~~~~~~P~-~~~~eVlIrv~a~gi~~~D~~~~~g~~~~-~~~p~v~G~E~~G~V~ 69 (368)
T cd08300 3 CKAAVAWEAGKP-----------LSIEEVEVAP-PKAGEVRIKILATGVCHTDAYTLSGADPE-GLFPVILGHEGAGIVE 69 (368)
T ss_pred ceEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEechhhHHHhcCCCcc-CCCCceeccceeEEEE
Confidence 899998877654 3446899999 59999999999999999999999887643 3578999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~ 112 (347)
++|+++++|++||+|+... ..|+|+||+++++
T Consensus 70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 149 (368)
T cd08300 70 SVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAE 149 (368)
T ss_pred EeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEch
Confidence 9999999999999997641 1258999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
+.++++|+++++++++.+++++.+||+++...+.+++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|++.++
T Consensus 150 ~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~ 228 (368)
T cd08300 150 ISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAK 228 (368)
T ss_pred hceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999999877889999999999986 9999999999999999 7999999999999999
Q ss_pred hcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCC-CCcchhHhh
Q 019049 192 SLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEI-PVIPANIAL 266 (347)
Q Consensus 192 ~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~ 266 (347)
++|+++++++.+. ++ .+.+.+.+.+ ++|++|||+|+ ..+..++++++++ |+++.+|...... ...+...+.
T Consensus 229 ~lGa~~~i~~~~~~~~~---~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 304 (368)
T cd08300 229 KFGATDCVNPKDHDKPI---QQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV 304 (368)
T ss_pred HcCCCEEEcccccchHH---HHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh
Confidence 9999999987754 24 4455556665 89999999997 5778899999886 9999998764221 111222222
Q ss_pred hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
++..+.++..+.+.. .+.+.++++++.+|++++ .++++|+|+++++||+.+.+++. .|++++
T Consensus 305 -~~~~~~g~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 305 -TGRVWKGTAFGGWKS------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred -hcCeEEEEEecccCc------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 344666665444321 366788999999999985 48899999999999999988775 488774
No 21
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.7e-44 Score=326.59 Aligned_cols=309 Identities=22% Similarity=0.327 Sum_probs=258.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++++ ..+++++.|. |+++||+||+.++++|++|++.+.|..+ ...+|.++|||++|+|+
T Consensus 3 ~ka~~~~~~~~~-----------~~l~~~~~p~-~~~~evlIkv~a~gi~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~ 69 (369)
T cd08301 3 CKAAVAWEAGKP-----------LVIEEVEVAP-PQAMEVRIKILHTSLCHTDVYFWEAKGQ-TPLFPRILGHEAAGIVE 69 (369)
T ss_pred cEEEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEEeeCchhHHHhcCCCC-CCCCCcccccccceEEE
Confidence 899999887765 4446889999 5999999999999999999999888654 24578999999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-------------------------------------------------CCCcceeeEeee
Q 019049 81 AVGPNVSNFKVGDTVCGFA-------------------------------------------------ALGSFAQFIVAD 111 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~ 111 (347)
++|+++++|++||+|+.+. ..|+|++|++++
T Consensus 70 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~ 149 (369)
T cd08301 70 SVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVH 149 (369)
T ss_pred EeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEe
Confidence 9999999999999998641 137899999999
Q ss_pred CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL 190 (347)
Q Consensus 112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~ 190 (347)
+..++++|+++++++++++++++.++|+++...+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+
T Consensus 150 ~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~ 228 (369)
T cd08301 150 VGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA 228 (369)
T ss_pred cccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 99999999999999999999999999999878899999999999987 9999999999999999 899999999999999
Q ss_pred HhcCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccC-CEEEEEeecCCC-CCCcchhHh
Q 019049 191 KSLGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWG-AQILVIGFASGE-IPVIPANIA 265 (347)
Q Consensus 191 ~~~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~ 265 (347)
+++|++.++++... .+ .+.+.+.+++ ++|++|||+|.. .+..++++++++ |+++.+|..... ...++...+
T Consensus 229 ~~~Ga~~~i~~~~~~~~~---~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~ 304 (369)
T cd08301 229 KKFGVTEFVNPKDHDKPV---QEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL 304 (369)
T ss_pred HHcCCceEEcccccchhH---HHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH
Confidence 99999998887652 23 3444555554 899999999974 568889999996 999999976532 112222223
Q ss_pred hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.+++++.++....+. .+..++++++++.+|.+++ .++++|+|+|+++||+.+.+++.. |+++
T Consensus 305 -~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 305 -LNGRTLKGTLFGGYK------PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred -hcCCeEEEEecCCCC------hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 468999998765432 1356888999999999875 478999999999999999998865 8776
No 22
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1e-43 Score=319.28 Aligned_cols=307 Identities=21% Similarity=0.259 Sum_probs=253.1
Q ss_pred Cceeeecc--ccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCC--ceeEEEEEeCCCCCCCCCCCEEE
Q 019049 21 SPIVLSKT--EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS--DYSGTVDAVGPNVSNFKVGDTVC 96 (347)
Q Consensus 21 ~~~~~~~~--~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~--e~~G~V~~vG~~v~~~~~Gd~V~ 96 (347)
+.|.+.+. .+.|..+++||||||+.++++||.|.....+... ....|.++|+ +++|+|..+|+++++|++||+|+
T Consensus 25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~-~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~ 103 (348)
T PLN03154 25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD-SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLIS 103 (348)
T ss_pred ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC-CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEE
Confidence 33777663 5665424799999999999999999875443222 2235888998 88999999999999999999999
Q ss_pred EecCCCcceeeEeeeCCC--eee--CCCCCCHH-HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHH
Q 019049 97 GFAALGSFAQFIVADQSE--LFP--VPKGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGK 171 (347)
Q Consensus 97 ~~~~~g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~ 171 (347)
++ |+|++|.+++.+. +++ +|++++++ ++|+++++++|||+++...+++++|++|||+|++|++|++++|+|+
T Consensus 104 ~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk 180 (348)
T PLN03154 104 GI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAK 180 (348)
T ss_pred ec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 86 6899999998853 544 59999987 6888999999999999888899999999999999999999999999
Q ss_pred HcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049 172 VCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 249 (347)
Q Consensus 172 ~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~ 249 (347)
.+|++|++++++++++++++ ++|+++++++.+. ++ .+.+.+.++ .++|++|||+|+..+..++++++++|+++.
T Consensus 181 ~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~~-~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~ 256 (348)
T PLN03154 181 LHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDL---DAALKRYFP-EGIDIYFDNVGGDMLDAALLNMKIHGRIAV 256 (348)
T ss_pred HcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccH---HHHHHHHCC-CCcEEEEECCCHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999987 7999999998754 44 344444554 589999999998888999999999999999
Q ss_pred EeecCCCCC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHH
Q 019049 250 IGFASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAI 324 (347)
Q Consensus 250 ~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~ 324 (347)
+|..++... ..+...++.+++++.|++...+.. ...+.++++++++.+|++++.+..+|+|+++++|++.+
T Consensus 257 ~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~----~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l 332 (348)
T PLN03154 257 CGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLH----LFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGL 332 (348)
T ss_pred ECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHH----HHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHH
Confidence 987653211 123455778899999987544321 12467888999999999998888899999999999999
Q ss_pred HcCCcceeEEEEeCC
Q 019049 325 EDRKVIGKVMIAFDD 339 (347)
Q Consensus 325 ~~~~~~gk~vv~~~~ 339 (347)
.+++..||+|+++.+
T Consensus 333 ~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 333 FSGKNVGKQVIRVAK 347 (348)
T ss_pred HcCCCCceEEEEecC
Confidence 999999999999854
No 23
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.9e-44 Score=321.89 Aligned_cols=312 Identities=22% Similarity=0.311 Sum_probs=255.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++. ..+++.|.|.+++++||+|||.++++|++|++.+..... ..+|.++|||++|+|+
T Consensus 1 Mka~~~~~~~~------------~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~ 66 (347)
T PRK10309 1 MKSVVNDTDGI------------VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVE 66 (347)
T ss_pred CceEEEeCCCc------------eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEE
Confidence 99999998764 334678889843689999999999999999976433211 2357899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
++|+++++|++||+|+.+. ..|+|++|+.++++.++++|+++++++++.+. +
T Consensus 67 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~ 145 (347)
T PRK10309 67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-P 145 (347)
T ss_pred EeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-H
Confidence 9999999999999998642 25899999999999999999999999998773 5
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
+.++++++ ....++++++|+|+|+ |++|++++|+|+.+|++ |+++++++++++.++++|+++++++.+.. .++
T Consensus 146 ~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~----~~~ 219 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS----APQ 219 (347)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC----HHH
Confidence 66788876 5678899999999986 99999999999999996 78999999999999999999999876543 234
Q ss_pred HHHHhcCCccc-EEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC--CcchhHhhhcceEEEEEEeccccccCchhH
Q 019049 213 FLKARKLKGVD-VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP--VIPANIALVKNWTVHGLYWGSYKIHRPHVL 288 (347)
Q Consensus 213 ~~~~~~~~~~d-~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
+.+.+.+.++| ++|||+|. ..+..++++++++|+++.+|....... ..+...++.+++++.+++.+..... .
T Consensus 220 ~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~----~ 295 (347)
T PRK10309 220 IQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPW----P 295 (347)
T ss_pred HHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCc----c
Confidence 55666667888 99999997 477899999999999999997654321 1122356788999999765422111 1
Q ss_pred HHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 289 EDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 289 ~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++++++++.+|.++ +.++++|+|+|+++|++.+.+++..||+|+++
T Consensus 296 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 296 GQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred hhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 35678899999999986 46899999999999999999998889999976
No 24
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=9e-44 Score=321.14 Aligned_cols=308 Identities=24% Similarity=0.310 Sum_probs=259.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|+|+++++++.+ +.+++++.|+ |+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+
T Consensus 10 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~eVlVrv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~E~~G~Vv 76 (357)
T PLN02514 10 TTGWAARDPSGH-----------LSPYTYTLRK-TGPEDVVIKVIYCGICHTDLHQIKNDLGM-SNYPMVPGHEVVGEVV 76 (357)
T ss_pred EEEEEEecCCCC-----------ceEEeecCCC-CCCCcEEEEEEEeccChHHHHhhcCCcCc-CCCCccCCceeeEEEE
Confidence 578999999876 5557899999 59999999999999999999998876532 3468899999999999
Q ss_pred EeCCCCCCCCCCCEEEE-e----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHH
Q 019049 81 AVGPNVSNFKVGDTVCG-F----------------------------------AALGSFAQFIVADQSELFPVPKGCDLL 125 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~-~----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~ 125 (347)
++|+++++|++||+|+. + ..+|+|++|++++.+.++++|++++++
T Consensus 77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~ 156 (357)
T PLN02514 77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPE 156 (357)
T ss_pred EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHH
Confidence 99999999999999963 1 125899999999999999999999999
Q ss_pred HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcEEEeCCCC
Q 019049 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDHVVDLSNE 204 (347)
Q Consensus 126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~ 204 (347)
+++.+++.+.|||+++......++|++|+|+|+ |++|++++|+|+.+|++|++++.++++++.+ +++|++.+++..+.
T Consensus 157 ~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~ 235 (357)
T PLN02514 157 QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA 235 (357)
T ss_pred HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh
Confidence 999999999999999876666789999999976 9999999999999999999999888777655 56999887765432
Q ss_pred CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049 205 SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH 283 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
..+.+.+ .++|++|||+|. ..+..++++++++|+++.+|...... .++...++.+++++.+++...
T Consensus 236 ------~~~~~~~--~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~i~g~~~~~---- 302 (357)
T PLN02514 236 ------AEMQEAA--DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPL-QFVTPMLMLGRKVITGSFIGS---- 302 (357)
T ss_pred ------HHHHHhc--CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCC-cccHHHHhhCCcEEEEEecCC----
Confidence 1233333 369999999996 57788999999999999999765332 345566778899999987654
Q ss_pred CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCC
Q 019049 284 RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMK 341 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~ 341 (347)
...++++++++.+|++++.+ ++|+++++.+||+.+.+++..||+|+.++...
T Consensus 303 -----~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~~ 354 (357)
T PLN02514 303 -----MKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAGSN 354 (357)
T ss_pred -----HHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccccc
Confidence 35788899999999998766 58999999999999999998899999986543
No 25
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.3e-43 Score=321.27 Aligned_cols=310 Identities=24% Similarity=0.367 Sum_probs=256.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++++ ..++++|.|. ++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+
T Consensus 3 ~ka~~~~~~~~~-----------~~~~~~~~p~-~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~ 68 (365)
T cd08277 3 CKAAVAWEAGKP-----------LVIEEIEVAP-PKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVE 68 (365)
T ss_pred cEEEEEccCCCC-----------cEEEEEECCC-CCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEE
Confidence 789989887754 4457899999 5999999999999999999999988654 3568899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCcceeeEeeeCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQS 113 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~ 113 (347)
++|++++++++||+|+... ..|+|++|+.++.+
T Consensus 69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~ 148 (365)
T cd08277 69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN 148 (365)
T ss_pred eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence 9999999999999998641 13789999999999
Q ss_pred CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh
Q 019049 114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS 192 (347)
Q Consensus 114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~ 192 (347)
.++++|+++++++++.+++++.|||+++...+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.+++
T Consensus 149 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~ 227 (365)
T cd08277 149 YVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKE 227 (365)
T ss_pred heEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999877889999999999986 9999999999999999 79999999999999999
Q ss_pred cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccC-CEEEEEeecCCCCCCcchhHhhhcce
Q 019049 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWG-AQILVIGFASGEIPVIPANIALVKNW 270 (347)
Q Consensus 193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 270 (347)
+|++++++..+.+. ...+.+.+.++ .++|++|||+|. ..+..++++++++ |+++.+|...+....++...++. ++
T Consensus 228 ~ga~~~i~~~~~~~-~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~ 304 (365)
T cd08277 228 FGATDFINPKDSDK-PVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GR 304 (365)
T ss_pred cCCCcEeccccccc-hHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CC
Confidence 99999988765321 01334555555 689999999996 5668899999885 99999987653222233333443 78
Q ss_pred EEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 271 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
++.+++.+.+.. ...++++++++.++.++ +.++++|+++|+++||+.+.+++. .|+++
T Consensus 305 ~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i 364 (365)
T cd08277 305 TWKGSFFGGFKS------RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI 364 (365)
T ss_pred EEEeeecCCCCh------HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence 888877655321 35678899999999876 458899999999999999988874 47776
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.9e-43 Score=321.27 Aligned_cols=308 Identities=20% Similarity=0.249 Sum_probs=241.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCC------CCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCc
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLN------SSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSD 74 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e 74 (347)
|||+++.+++.. .++++|.|++. ++|||+|||.++|||++|++.+.|..+ ..+|.++|||
T Consensus 3 mka~v~~~~~~~------------~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~--~~~p~i~GhE 68 (393)
T TIGR02819 3 NRGVVYLGPGKV------------EVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT--APTGLVLGHE 68 (393)
T ss_pred ceEEEEecCCce------------eEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC--CCCCccccce
Confidence 999999888864 23688888841 269999999999999999999987643 3568999999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEEe-------------------------------c------CCCcceeeEeeeCC--Ce
Q 019049 75 YSGTVDAVGPNVSNFKVGDTVCGF-------------------------------A------ALGSFAQFIVADQS--EL 115 (347)
Q Consensus 75 ~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~------~~g~~~~~~~~~~~--~~ 115 (347)
++|+|+++|++|++|++||||+.. . .+|+|+||+++++. .+
T Consensus 69 ~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l 148 (393)
T TIGR02819 69 ITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNL 148 (393)
T ss_pred eEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCce
Confidence 999999999999999999999531 0 24899999999974 79
Q ss_pred eeCCCCCCH----HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHH
Q 019049 116 FPVPKGCDL----LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFL 190 (347)
Q Consensus 116 ~~~p~~~~~----~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~ 190 (347)
+++|++++. .+++++.+++.++|+++ ..++++++++|+|.|+ |++|++++|+|+.+|++ |++++.+++|++.+
T Consensus 149 ~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a 226 (393)
T TIGR02819 149 LKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQA 226 (393)
T ss_pred EECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH
Confidence 999998753 35677788999999998 4688999999999766 99999999999999997 45556788899999
Q ss_pred HhcCCcEEEeCC-CCCchhhHHHHHHHhcCCcccEEEeCCCcc---------------chHHHHhccccCCEEEEEeecC
Q 019049 191 KSLGVDHVVDLS-NESVIPSVKEFLKARKLKGVDVLYDPVGGK---------------LTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 191 ~~~g~~~v~~~~-~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+++|++. ++.. +.++ .+.+.+.+.+.++|++|||+|.+ .+..++++++++|+++.+|...
T Consensus 227 ~~~Ga~~-v~~~~~~~~---~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~ 302 (393)
T TIGR02819 227 RSFGCET-VDLSKDATL---PEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYV 302 (393)
T ss_pred HHcCCeE-EecCCcccH---HHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecC
Confidence 9999975 4443 3344 44566667777899999999975 6889999999999999999863
Q ss_pred C-CCCC-----------cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eec-eeeChhhHHH
Q 019049 255 G-EIPV-----------IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HIS-HTYSPSEANL 319 (347)
Q Consensus 255 ~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~-~~~~~~~~~~ 319 (347)
. .... +....++.++.++.+..... .+...++++++.+|++++ .++ ++|+|+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~ 373 (393)
T TIGR02819 303 TEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPV---------MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPE 373 (393)
T ss_pred CcccccccccccccccccchHHhhccCceEEeccCCh---------hhhHHHHHHHHHcCCCCHHHceecceecHHHHHH
Confidence 2 1111 11223345555555521100 133467899999999985 344 7899999999
Q ss_pred HHHHHHcCCcceeEEEEeC
Q 019049 320 AFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 320 a~~~~~~~~~~gk~vv~~~ 338 (347)
||+.+.+++. +|+++.++
T Consensus 374 a~~~~~~~~~-~Kvvi~~~ 391 (393)
T TIGR02819 374 GYAEFDAGAA-KKFVIDPH 391 (393)
T ss_pred HHHHHhhCCc-eEEEEeCC
Confidence 9999988754 79999873
No 27
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.2e-43 Score=318.05 Aligned_cols=299 Identities=23% Similarity=0.327 Sum_probs=249.7
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF----- 98 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----- 98 (347)
..+++.|.|. |+++||+|||.++++|++|++.+.+.+.....+|.++|||++|+|+++|+++..+ +||+|+..
T Consensus 11 ~~~~~~p~P~-~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~c 88 (349)
T TIGR03201 11 MVKTRVEIPE-LGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPC 88 (349)
T ss_pred ceEEeccCCC-CCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCC
Confidence 3446899999 5999999999999999999998754433223568899999999999999999887 99999751
Q ss_pred ----------------------cCCCcceeeEeeeCCCeeeCCC------CCCHHHHccCcchHHHHHHHHHHhcCCCCC
Q 019049 99 ----------------------AALGSFAQFIVADQSELFPVPK------GCDLLAAAALPVAFGTSHVALVHRAQLSSG 150 (347)
Q Consensus 99 ----------------------~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~ 150 (347)
..+|+|++|++++.+.++++|+ ++++++++.+++++.++|+++. ..++++|
T Consensus 89 g~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g 167 (349)
T TIGR03201 89 GECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKG 167 (349)
T ss_pred CCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCC
Confidence 1358999999999999999999 8999999999999999999985 5789999
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc----EEE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD----VLY 226 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d----~v~ 226 (347)
++|+|+|+ |++|++++|+|+..|++|++++++++|++.++++|+++++++.+.+..+..+.+.+.+++.++| .+|
T Consensus 168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~ 246 (349)
T TIGR03201 168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIF 246 (349)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEE
Confidence 99999999 9999999999999999999999999999999999999999876643222245566677777776 899
Q ss_pred eCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee
Q 019049 227 DPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT 305 (347)
Q Consensus 227 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~ 305 (347)
||+|+. .+..++++++++|+++.+|...... .++...++.++.++.+++... .+.++++++++.+|+++
T Consensus 247 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~i~~g~i~ 316 (349)
T TIGR03201 247 ECSGSKPGQESALSLLSHGGTLVVVGYTMAKT-EYRLSNLMAFHARALGNWGCP---------PDRYPAALDLVLDGKIQ 316 (349)
T ss_pred ECCCChHHHHHHHHHHhcCCeEEEECcCCCCc-ccCHHHHhhcccEEEEEecCC---------HHHHHHHHHHHHcCCCC
Confidence 999985 4677899999999999999765432 344456667788888866432 35788999999999998
Q ss_pred ee-eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 306 IH-ISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 306 ~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+. +.+.|+|+++++||+.+.+++..||++++
T Consensus 317 ~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 317 LGPFVERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred cccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence 53 33579999999999999999989999885
No 28
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=4.8e-43 Score=314.85 Aligned_cols=302 Identities=23% Similarity=0.302 Sum_probs=248.7
Q ss_pred eeeccccC----CCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCce--eEEEEEeCCCCCCCCCCCEEEE
Q 019049 24 VLSKTEPI----PQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDY--SGTVDAVGPNVSNFKVGDTVCG 97 (347)
Q Consensus 24 ~~~~~~~~----p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~V~~ 97 (347)
+.+.+.+. |+ |+++||||||.++++||.|++...|.......+|.++|++. .|++..+|+.+++|++||+|++
T Consensus 21 ~~~~~~~~~~~~p~-p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~ 99 (338)
T cd08295 21 LELRTTKLTLKVPP-GGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG 99 (338)
T ss_pred eEEEEecCCcCCCC-CCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe
Confidence 44456665 88 69999999999999999999998875432234577889754 4566667888889999999998
Q ss_pred ecCCCcceeeEeeeC-CCeeeCC-CCCCHH-HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Q 019049 98 FAALGSFAQFIVADQ-SELFPVP-KGCDLL-AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG 174 (347)
Q Consensus 98 ~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g 174 (347)
+ |+|+||+++++ ..++++| +++++. +++++++++.|||+++...+++++|++|||+|++|++|++++|+|+.+|
T Consensus 100 ~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G 176 (338)
T cd08295 100 F---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKG 176 (338)
T ss_pred c---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcC
Confidence 6 68999999999 7999995 678887 7999999999999999888999999999999999999999999999999
Q ss_pred CEEEEEecChhhHHHHHh-cCCcEEEeCCCC-CchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEee
Q 019049 175 ATIIAVARGAEKIKFLKS-LGVDHVVDLSNE-SVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGF 252 (347)
Q Consensus 175 ~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~-~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~ 252 (347)
++|+++++++++.+++++ +|+++++++.+. ++ .+.+.+.++ .++|++||++|+..+..++++++++|+++.+|.
T Consensus 177 ~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~---~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 177 CYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDL---DAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred CEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccH---HHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 999999999999999998 999999987653 44 334444444 689999999999888999999999999999986
Q ss_pred cCCCCC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC
Q 019049 253 ASGEIP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR 327 (347)
Q Consensus 253 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~ 327 (347)
...... ..+...++.+++++.++....+ +....+.++++++++.+|.+++.+...|+++++++|++.+.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~ 328 (338)
T cd08295 253 ISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDY----LHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTG 328 (338)
T ss_pred cccCCCCCCCCccCHHHHhhccceeeEEEehhh----HHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcC
Confidence 543211 1233456677888887655432 1223467888999999999998777789999999999999999
Q ss_pred CcceeEEEEe
Q 019049 328 KVIGKVMIAF 337 (347)
Q Consensus 328 ~~~gk~vv~~ 337 (347)
+..||+|+++
T Consensus 329 ~~~GkvVl~~ 338 (338)
T cd08295 329 SNIGKQVVKV 338 (338)
T ss_pred CCCceEEEEC
Confidence 9999999874
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=5.7e-43 Score=316.05 Aligned_cols=306 Identities=24% Similarity=0.310 Sum_probs=260.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC-CC---------CCCCCcc
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY-QE---------KPPLPFV 70 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~-~~---------~~~~p~~ 70 (347)
|||+++.+++. ..+++++.|. |+++||+||+.++++|++|++.+.+.. .. +..+|.+
T Consensus 1 mka~~~~~~~~------------l~~~~~~~p~-~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i 67 (351)
T cd08233 1 MKAARYHGRKD------------IRVEEVPEPP-VKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVT 67 (351)
T ss_pred CceEEEecCCc------------eEEEeccCCC-CCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCce
Confidence 99999988764 3346889999 599999999999999999998765431 11 1236889
Q ss_pred cCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049 71 PGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGC 122 (347)
Q Consensus 71 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~ 122 (347)
+|||++|+|+++|+++++|++||+|+... .+|+|++|++++.+.++++|+++
T Consensus 68 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~ 147 (351)
T cd08233 68 LGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNV 147 (351)
T ss_pred ecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCC
Confidence 99999999999999999999999998621 15899999999999999999999
Q ss_pred CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL 201 (347)
Q Consensus 123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~ 201 (347)
++++++.+ .++.+||+++ ..++++++++|+|+|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus 148 ~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 224 (351)
T cd08233 148 PLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDP 224 (351)
T ss_pred CHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECC
Confidence 99998866 6888999998 7889999999999986 9999999999999999 89999999999999999999999998
Q ss_pred CCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc
Q 019049 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY 280 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
.+.++ .+.+.+.+.+.++|+++||+|. ..+..++++++++|+++.+|..... ..++...++.+++++.+++...
T Consensus 225 ~~~~~---~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~- 299 (351)
T cd08233 225 TEVDV---VAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKP-ISFNPNDLVLKEKTLTGSICYT- 299 (351)
T ss_pred CccCH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCC-CccCHHHHHhhCcEEEEEeccC-
Confidence 87776 5666677777789999999986 5778899999999999999976532 3345556778899999876432
Q ss_pred cccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhH-HHHHHHHHcCCcc-eeEEE
Q 019049 281 KIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEA-NLAFSAIEDRKVI-GKVMI 335 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vv 335 (347)
.+.++++++++.+|.+++ .++++|+++|+ ++|++.+.+++.. ||+||
T Consensus 300 --------~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 300 --------REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred --------cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 367899999999999964 47889999996 7999999998874 89987
No 30
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.1e-43 Score=317.92 Aligned_cols=302 Identities=22% Similarity=0.258 Sum_probs=238.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCC--CCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP--PLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~--~~p~~~G~e~~G~ 78 (347)
|||+++..++ ++ ..++++|.|+ |+++||+|||.++++|++|++.+.|.++..+ .+|.++|||++|+
T Consensus 1 mka~~~~~~~-~~----------l~~~~~p~p~-~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~ 68 (355)
T cd08230 1 MKAIAVKPGK-PG----------VRVVDIPEPE-PTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGV 68 (355)
T ss_pred CceeEecCCC-CC----------CeEEeCCCCC-CCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceE
Confidence 8999998643 21 3346899999 5999999999999999999999998754322 3578999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec------------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHc
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAA 128 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa 128 (347)
|+++|++ ++|++||||+... .+|+|++|++++++.++++|++++ +++
T Consensus 69 V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a 145 (355)
T cd08230 69 VEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVG 145 (355)
T ss_pred EEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cce
Confidence 9999999 9999999997531 248899999999999999999998 444
Q ss_pred cCcchHHHHHHHHHHh------cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec---ChhhHHHHHhcCCcEEE
Q 019049 129 ALPVAFGTSHVALVHR------AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR---GAEKIKFLKSLGVDHVV 199 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~------~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~---~~~~~~~~~~~g~~~v~ 199 (347)
++..++.+++.++... .++.+|++|+|+|+ |++|++++|+|+..|++|+++++ +++|++.++++|++. +
T Consensus 146 ~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v 223 (355)
T cd08230 146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-V 223 (355)
T ss_pred eecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-e
Confidence 5556777666555322 23568999999997 99999999999999999999987 678999999999987 4
Q ss_pred eCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcc----hhHhhhcceEEE
Q 019049 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIP----ANIALVKNWTVH 273 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~----~~~~~~~~~~~~ 273 (347)
++.+.++ .+ .. ...++|++|||+|++ .+..++++++++|+++.+|...+. ...++ ...++.+++++.
T Consensus 224 ~~~~~~~---~~--~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~ 296 (355)
T cd08230 224 NSSKTPV---AE--VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALV 296 (355)
T ss_pred cCCccch---hh--hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEE
Confidence 6555443 11 11 135899999999974 678899999999999999976642 11222 245678999999
Q ss_pred EEEeccccccCchhHHHHHHHHHHHHHcCc------eeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 274 GLYWGSYKIHRPHVLEDSLRELLLWAAKGL------ITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~------l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
|+...+ .+.++++++++.++. +++.++++|+++|+++||+.+.++. +|+|++|
T Consensus 297 g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 297 GSVNAN---------KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred EecCCc---------hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 976433 245677777777665 5556889999999999999887654 4999865
No 31
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.1e-42 Score=313.10 Aligned_cols=324 Identities=28% Similarity=0.362 Sum_probs=273.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCC-CeEEEEEEEecCChhhHHHHhccCCCCCC----CCcccCCce
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSS-TAVRVRVKATSLNYANYLQILGKYQEKPP----LPFVPGSDY 75 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~eV~i~v~~~~i~~~d~~~~~g~~~~~~~----~p~~~G~e~ 75 (347)
|||+++.++|.+. ....+++.|.|. |.+ +||+|++.++++|++|+..+.|..+.... +|.++|||+
T Consensus 1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~ 71 (341)
T cd08290 1 AKALVYTEHGEPK--------EVLQLESYEIPP-PGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEG 71 (341)
T ss_pred CceEEEccCCCch--------hheEEeecCCCC-CCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcce
Confidence 9999999998762 113456788888 477 99999999999999999998887643222 677899999
Q ss_pred eEEEEEeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049 76 SGTVDAVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 154 (347)
Q Consensus 76 ~G~V~~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl 154 (347)
+|+|+++|+++..+++||+|++.. ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.....++++++||
T Consensus 72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 151 (341)
T cd08290 72 VGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVI 151 (341)
T ss_pred EEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEE
Confidence 999999999999999999999875 3599999999999999999999999999999999999999997778899999999
Q ss_pred EecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhcCCcccEEEe
Q 019049 155 VLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 155 I~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
|+|++|++|++++|+|+..|+++++++.++ ++.+.++++|+++++++... .+ ...+...+.+ ++|+++|
T Consensus 152 I~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~i~~~~~~-~~d~vld 227 (341)
T cd08290 152 QNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLA---TELLKSAPGG-RPKLALN 227 (341)
T ss_pred EccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccH---HHHHHHHcCC-CceEEEE
Confidence 999999999999999999999999998876 66888889999999987664 44 4445555555 8999999
Q ss_pred CCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc-cCchhHHHHHHHHHHHHHcCceee
Q 019049 228 PVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI-HRPHVLEDSLRELLLWAAKGLITI 306 (347)
Q Consensus 228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~ 306 (347)
|+|+......+++++++|+++.+|.........+....+.++.++.+.....+.. .+|....+.++.+++++.++.+.+
T Consensus 228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (341)
T cd08290 228 CVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKA 307 (341)
T ss_pred CcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccC
Confidence 9999878888999999999999985443322334445578899999988765544 556666678899999999999987
Q ss_pred eeceee---ChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 307 HISHTY---SPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 307 ~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+...+ ++++++++++.+.++...||+|+++
T Consensus 308 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 308 PPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 666677 9999999999999999999999864
No 32
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.7e-42 Score=309.19 Aligned_cols=311 Identities=22% Similarity=0.289 Sum_probs=253.8
Q ss_pred CceEEecc-c-CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049 1 MEALVCRK-L-GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~ 78 (347)
||+|++.+ + |.+. .+.+.+++.+.|+ |+++||+|||.++++|+.|..... . ..++|.++|+|++|+
T Consensus 3 ~~~~~~~~~~~~~~~-------~~~l~~~~~~~p~-~~~~evlVkv~a~~in~~~~~~~~--~--~~~~p~v~G~e~~G~ 70 (329)
T cd08294 3 AKTWVLKKHFDGKPK-------ESDFELVEEELPP-LKDGEVLCEALFLSVDPYMRPYSK--R--LNEGDTMIGTQVAKV 70 (329)
T ss_pred ceEEEEecCCCCCCC-------ccceEEEecCCCC-CCCCcEEEEEEEEecCHHHhcccc--c--CCCCCcEecceEEEE
Confidence 89999998 3 5541 1225556899999 699999999999999998765211 1 124588999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCC---CeeeCCCCCC-----HHHHccCcchHHHHHHHHHHhcCCCCC
Q 019049 79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQS---ELFPVPKGCD-----LLAAAALPVAFGTSHVALVHRAQLSSG 150 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~~ 150 (347)
|++ .+++|++||+|+++ ++|++|++++.+ .++++|++++ ...+++++.+++|||+++...+++++|
T Consensus 71 V~~---~~~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g 144 (329)
T cd08294 71 IES---KNSKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG 144 (329)
T ss_pred Eec---CCCCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence 985 45689999999986 479999999999 9999999998 233346789999999999888999999
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
++|||+|++|++|.+++|+|+.+|++|+++++++++.+.++++|+++++++.+.++ .+.+.+.++ .++|++||++|
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~---~~~v~~~~~-~gvd~vld~~g 220 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSL---EEALKEAAP-DGIDCYFDNVG 220 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccH---HHHHHHHCC-CCcEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999988776 445555554 68999999999
Q ss_pred ccchHHHHhccccCCEEEEEeecCCC-CC-----CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCce
Q 019049 231 GKLTKESLKLLNWGAQILVIGFASGE-IP-----VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304 (347)
Q Consensus 231 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 304 (347)
++.+..++++++++|+++.+|..... .. ......++.+++++.++....+. ....+.++++++++.+|++
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~l~~~g~i 296 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQ----DRWPEALKQLLKWIKEGKL 296 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhH----HHHHHHHHHHHHHHHCCCC
Confidence 98889999999999999999854321 11 11223456778888886643321 2335678899999999999
Q ss_pred eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 305 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++.+...|+++++++|++.+.+++..||+|+++
T Consensus 297 ~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 297 KYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred cCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 977667899999999999999999999999863
No 33
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.2e-42 Score=284.00 Aligned_cols=325 Identities=29% Similarity=0.378 Sum_probs=278.6
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
|+++++++|.| .+++...++++|+. ..++|+|+..|+-|||+|+..++|.|+.++.+|.+-|.|++|.|+.
T Consensus 21 kalvY~~hgdP--------~kVlql~~~~~p~~-~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~ 91 (354)
T KOG0025|consen 21 KALVYSEHGDP--------AKVLQLKNLELPAV-PGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA 91 (354)
T ss_pred ceeeecccCCc--------hhhheeecccCCCC-CCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence 78899999988 55667778999996 5566999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCEEEEecC-CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 82 VGPNVSNFKVGDTVCGFAA-LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
+|+++.+|++||+|+-... .|.|++|.+.+++.++++++.++++.||++...-+|||.-|.....+++|++|+-.||++
T Consensus 92 vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS 171 (354)
T KOG0025|consen 92 VGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANS 171 (354)
T ss_pred ecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCccc
Confidence 9999999999999997764 499999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE 236 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 236 (347)
++|.+.+|+|+++|.+-+-++++....+.+ +++||++|+.-.+..- -+.........+..+.|||+|+.....
T Consensus 172 ~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~---~~~~k~~~~~~~prLalNcVGGksa~~ 248 (354)
T KOG0025|consen 172 GVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD---RKMKKFKGDNPRPRLALNCVGGKSATE 248 (354)
T ss_pred HHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc---hhhhhhhccCCCceEEEeccCchhHHH
Confidence 999999999999999988888877665554 5699999985221110 011111123457889999999998889
Q ss_pred HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC--chhHHHHHHHHHHHHHcCceeeeeceeeCh
Q 019049 237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR--PHVLEDSLRELLLWAAKGLITIHISHTYSP 314 (347)
Q Consensus 237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~ 314 (347)
+.+.|..+|+++.+|.-+......+...+++|++.+.|+++..|...+ |+...+.+.++.+++..|++..+.....+|
T Consensus 249 iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L 328 (354)
T KOG0025|consen 249 IARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPL 328 (354)
T ss_pred HHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeec
Confidence 999999999999998777655567778899999999999999998765 888889999999999999999888788899
Q ss_pred hhHHHHHHHHHcC-CcceeEEEEeC
Q 019049 315 SEANLAFSAIEDR-KVIGKVMIAFD 338 (347)
Q Consensus 315 ~~~~~a~~~~~~~-~~~gk~vv~~~ 338 (347)
++...|++...+. ...||-++.++
T Consensus 329 ~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 329 ADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred hhhhHHHHHHHHHhccCCceEEEec
Confidence 9998888865543 34467666653
No 34
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2e-42 Score=317.73 Aligned_cols=312 Identities=19% Similarity=0.225 Sum_probs=248.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCCCC-----CCCCcccCCc
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQEK-----PPLPFVPGSD 74 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~~~-----~~~p~~~G~e 74 (347)
|||+++.+++. +.++++|.|+ |+++||+|||.++|+|++|++.+. |..... ..+|.++|||
T Consensus 3 ~~a~~~~~~~~------------l~~~e~p~P~-~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE 69 (410)
T cd08238 3 TKAWRMYGKGD------------LRLEKFELPE-IADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHE 69 (410)
T ss_pred cEEEEEEcCCc------------eEEEecCCCC-CCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccc
Confidence 77888877664 3346899999 599999999999999999999763 432111 1368899999
Q ss_pred eeEEEEEeCCCCC-CCCCCCEEEEec----------------CCCcceeeEeeeCC----CeeeCCCCCCHHHHccC-cc
Q 019049 75 YSGTVDAVGPNVS-NFKVGDTVCGFA----------------ALGSFAQFIVADQS----ELFPVPKGCDLLAAAAL-PV 132 (347)
Q Consensus 75 ~~G~V~~vG~~v~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l-~~ 132 (347)
++|+|+++|++++ +|++||||+... .+|+|++|++++++ .++++|+++++++++.+ +.
T Consensus 70 ~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl 149 (410)
T cd08238 70 FAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL 149 (410)
T ss_pred cEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence 9999999999998 699999997641 25999999999987 68999999999998855 32
Q ss_pred hH-HHHHHHH--------HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHhc-------
Q 019049 133 AF-GTSHVAL--------VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARGAEKIKFLKSL------- 193 (347)
Q Consensus 133 ~~-~~a~~~l--------~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~~~~~~~~~~~------- 193 (347)
++ .+++.++ ...+++++|++|+|+|++|++|++++|+|+.+|+ +|++++.+++|++.++++
T Consensus 150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~ 229 (410)
T cd08238 150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS 229 (410)
T ss_pred HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence 21 1233332 2457889999999999889999999999999864 799999999999999987
Q ss_pred -CCc-EEEeCCC-CCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC-CC-CCCcchhHhhh
Q 019049 194 -GVD-HVVDLSN-ESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS-GE-IPVIPANIALV 267 (347)
Q Consensus 194 -g~~-~v~~~~~-~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~ 267 (347)
|++ .++++.+ .++ .+.+.+.+.+.++|++||++|. ..+..++++++++|+++.++... .. ...++...++.
T Consensus 230 ~Ga~~~~i~~~~~~~~---~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~ 306 (410)
T cd08238 230 RGIELLYVNPATIDDL---HATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY 306 (410)
T ss_pred cCceEEEECCCccccH---HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence 666 5666654 344 5556677777899999999986 67788999999999888765432 11 12355566788
Q ss_pred cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049 268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
+++++.|+.... ...++++++++.+|++++ .++++|+|+++++|++.+. ++..||+|+.++
T Consensus 307 ~~~~i~g~~~~~---------~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 307 NNTHYVGTSGGN---------TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred cCcEEEEeCCCC---------HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 999999976433 367889999999999997 5899999999999999999 777899999874
No 35
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.8e-42 Score=310.16 Aligned_cols=308 Identities=22% Similarity=0.307 Sum_probs=242.7
Q ss_pred CCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC--CCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE
Q 019049 20 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG 97 (347)
Q Consensus 20 ~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 97 (347)
..+.+.+++.+.|++++++||+|||.|+|+|+.|........ .....+|.++|||++|+|+++|+++++|++||+|++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 98 (345)
T cd08293 19 VAENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS 98 (345)
T ss_pred CccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence 344566678999983249999999999999999964332111 111246788999999999999999999999999998
Q ss_pred ecCCCcceeeEeeeCCCeeeCCCCCCHHH----HccCcchHHHHHHHHHHhcCCCCC--CEEEEecCCchHHHHHHHHHH
Q 019049 98 FAALGSFAQFIVADQSELFPVPKGCDLLA----AAALPVAFGTSHVALVHRAQLSSG--QVLLVLGAAGGVGVAAVQIGK 171 (347)
Q Consensus 98 ~~~~g~~~~~~~~~~~~~~~~p~~~~~~~----aa~l~~~~~~a~~~l~~~~~~~~~--~~VlI~g~~g~~G~~~~~la~ 171 (347)
+. ++|++|++++++.++++|+++++.+ +++++.++.|||+++...++++++ ++|||+|++|++|++++|+|+
T Consensus 99 ~~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk 176 (345)
T cd08293 99 FN--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGR 176 (345)
T ss_pred cC--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 64 6899999999999999999854322 456778999999999888888877 999999999999999999999
Q ss_pred HcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049 172 VCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 249 (347)
Q Consensus 172 ~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~ 249 (347)
++|+ +|+++++++++.+.+++ +|+++++++.+.++ .+.+.+.++ .++|++|||+|+..+..++++++++|+++.
T Consensus 177 ~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~---~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~ 252 (345)
T cd08293 177 LLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNV---AERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIIL 252 (345)
T ss_pred HcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCH---HHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEE
Confidence 9999 89999999999999876 99999999887776 455555554 689999999998878899999999999999
Q ss_pred EeecCCC---CC---Ccc--hhH-hhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHH
Q 019049 250 IGFASGE---IP---VIP--ANI-ALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLA 320 (347)
Q Consensus 250 ~g~~~~~---~~---~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a 320 (347)
+|..... .. ... ... ...+++++..+.... .+....+.++++++++.+|.+++.....++++++++|
T Consensus 253 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A 328 (345)
T cd08293 253 CGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLN----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEA 328 (345)
T ss_pred EeeeecccCccCccccccchhHHHhhhcceEEEEEEeec----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHH
Confidence 9853221 10 111 011 123344443332211 2233456788899999999999776666799999999
Q ss_pred HHHHHcCCcceeEEEEe
Q 019049 321 FSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 321 ~~~~~~~~~~gk~vv~~ 337 (347)
++.+.+++..||+|+++
T Consensus 329 ~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 329 FQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHhcCCCCCeEEEEC
Confidence 99999999999999875
No 36
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-41 Score=305.79 Aligned_cols=329 Identities=29% Similarity=0.404 Sum_probs=277.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++.+.. ..+++.+.|. +.++||+|++.++++|+.|+....+.++.....|.++|+|++|+|+
T Consensus 2 m~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~ 71 (334)
T PTZ00354 2 MRAVTLKGFGGVDV---------LKIGESPKPA-PKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVE 71 (334)
T ss_pred cEEEEEEecCCCcc---------eEEEeCCCCC-CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEE
Confidence 99999998887632 3334667777 4899999999999999999999887665444567789999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
++|+++.++++||+|+++..+|+|++|++++.++++++|+++++.+++.++.++.+||+++...++++++++|+|+|++|
T Consensus 72 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 151 (334)
T PTZ00354 72 DVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGAS 151 (334)
T ss_pred EeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCc
Confidence 99999999999999999866799999999999999999999999999999999999999998778999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 239 (347)
++|++++++|+.+|+++++++.++++.+.++++|++.+++....+ + .+.+.+.+++.++|+++||.|+..+..+++
T Consensus 152 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 228 (334)
T PTZ00354 152 GVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGF---APKVKKLTGEKGVNLVLDCVGGSYLSETAE 228 (334)
T ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHH---HHHHHHHhCCCCceEEEECCchHHHHHHHH
Confidence 999999999999999988899999999999999998888876543 4 555666777778999999999888889999
Q ss_pred ccccCCEEEEEeecCCCCCC-cchhHhhhcceEEEEEEecc-ccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhH
Q 019049 240 LLNWGAQILVIGFASGEIPV-IPANIALVKNWTVHGLYWGS-YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEA 317 (347)
Q Consensus 240 ~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~ 317 (347)
+++++|+++.++...+.... ++...++.++.++.++.... .....+....+.++++++++.++.+++.+.+.++++++
T Consensus 229 ~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 308 (334)
T PTZ00354 229 VLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEV 308 (334)
T ss_pred HhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHH
Confidence 99999999999855432211 44444566777888876544 22234445556778889999999998778889999999
Q ss_pred HHHHHHHHcCCcceeEEEEeCCCCC
Q 019049 318 NLAFSAIEDRKVIGKVMIAFDDMKS 342 (347)
Q Consensus 318 ~~a~~~~~~~~~~gk~vv~~~~~~~ 342 (347)
+++++.+.+++..||+|+++.++-+
T Consensus 309 ~~~~~~~~~~~~~~kvvv~~~~~~~ 333 (334)
T PTZ00354 309 AEAHTFLEQNKNIGKVVLTVNEPLS 333 (334)
T ss_pred HHHHHHHHhCCCCceEEEecCCCCC
Confidence 9999999988888999998866543
No 37
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.9e-42 Score=309.44 Aligned_cols=310 Identities=30% Similarity=0.395 Sum_probs=250.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCc-ccCCceeEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPF-VPGSDYSGTV 79 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~-~~G~e~~G~V 79 (347)
|+++++..++.. ..+++.+.|. ++|+||+|||.++|||+||++.+++..+... .|. ++|||++|+|
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~-~~~~i~GHE~~G~V 67 (350)
T COG1063 1 MKAAVVYVGGGD-----------VRLEEPPPPI-PGPGDVLIRVTATGICGSDLHIYRGGEPFVP-PGDIILGHEFVGEV 67 (350)
T ss_pred CceeEEEecCCc-----------cccccCCCCC-CCCCeEEEEEEEEeEchhhhhhccCCCCCCC-CCCcccCccceEEE
Confidence 888888887754 2156777774 6999999999999999999999999765432 333 8999999999
Q ss_pred EEeCCCCCCCCCCCEEEE---------------------------ec-----CCCcceeeEeeeCCCeee-CCCCCCHHH
Q 019049 80 DAVGPNVSNFKVGDTVCG---------------------------FA-----ALGSFAQFIVADQSELFP-VPKGCDLLA 126 (347)
Q Consensus 80 ~~vG~~v~~~~~Gd~V~~---------------------------~~-----~~g~~~~~~~~~~~~~~~-~p~~~~~~~ 126 (347)
+++| .++.+++||||.. .. .+|+|+||+.+|.+++++ +|+++ ..+
T Consensus 68 ~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~ 145 (350)
T COG1063 68 VEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEE 145 (350)
T ss_pred EEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-Chh
Confidence 9999 7788999999930 00 258999999999866555 58888 556
Q ss_pred HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCC
Q 019049 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNE 204 (347)
Q Consensus 127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~ 204 (347)
++++..++.++|++........++++|+|.|+ |++|++++++++..|+ +|++++.+++|++.+++ .|++.+.+....
T Consensus 146 ~aal~epla~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~ 224 (350)
T COG1063 146 AAALTEPLATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED 224 (350)
T ss_pred hhhhcChhhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc
Confidence 66677999999887545555566669999999 9999999999999998 89999999999999998 666666655444
Q ss_pred CchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccccc
Q 019049 205 SVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIH 283 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.. ...+.+.+++.++|++|||+|.+ .+..++++++++|+++.+|........++...++.|++++.|+.....
T Consensus 225 ~~---~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~--- 298 (350)
T COG1063 225 DA---GAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSG--- 298 (350)
T ss_pred cH---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCC---
Confidence 33 66777888888999999999974 578999999999999999988765434667788999999999843111
Q ss_pred CchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCc-ceeEEEEe
Q 019049 284 RPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMIAF 337 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 337 (347)
...++..++++.+|++++ .+++.+++++++++|+.+.+++. .-|+++.+
T Consensus 299 -----~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 299 -----REDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -----cccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 357899999999999996 37889999999999999998654 45887753
No 38
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.3e-42 Score=310.91 Aligned_cols=312 Identities=24% Similarity=0.341 Sum_probs=258.6
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++.++++. +.+++.+.|. |+++||+|++.++++|++|+....|.++. ..+|.++|||++|+|++
T Consensus 2 ka~~~~~~~~~-----------l~~~~~~~p~-~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~ 68 (361)
T cd08231 2 RAAVLTGPGKP-----------LEIREVPLPD-LEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVA 68 (361)
T ss_pred eEEEEcCCCCC-----------CEEEeccCCC-CCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEE
Confidence 78999988843 4456899999 59999999999999999999999887643 45688999999999999
Q ss_pred eCCCCCC------CCCCCEEEEec----------------------------------CCCcceeeEeeeCC-CeeeCCC
Q 019049 82 VGPNVSN------FKVGDTVCGFA----------------------------------ALGSFAQFIVADQS-ELFPVPK 120 (347)
Q Consensus 82 vG~~v~~------~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~ 120 (347)
+|+++++ |++||+|+.+. ..|+|++|++++++ .++++|+
T Consensus 69 vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~ 148 (361)
T cd08231 69 LGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPD 148 (361)
T ss_pred eCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCC
Confidence 9999986 99999998761 25899999999996 7999999
Q ss_pred CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEE
Q 019049 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVV 199 (347)
Q Consensus 121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~ 199 (347)
++++++++.++++++|||+++......+++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++
T Consensus 149 ~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 149 NVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99999999999999999999977777779999999986 9999999999999999 999999999999999999999998
Q ss_pred eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEe
Q 019049 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYW 277 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 277 (347)
+++.....+....+.+.+++.++|++|||+|+ ..+..++++++++|+++.+|..... ....+...++.++.++.++..
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHN 307 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEccc
Confidence 87765542223456677777899999999986 5678899999999999999865422 122333446788999888764
Q ss_pred ccccccCchhHHHHHHHHHHHHHcC--ce--eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 278 GSYKIHRPHVLEDSLRELLLWAAKG--LI--TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~g--~l--~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+ .+.+++.++++.++ .+ .+.+.++|+++++++||+.+.++.. +|+||.+
T Consensus 308 ~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 308 YD---------PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred CC---------chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 33 24566777777776 33 3457889999999999999988774 7998853
No 39
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=5.9e-42 Score=306.20 Aligned_cols=296 Identities=21% Similarity=0.297 Sum_probs=243.9
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS 103 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~ 103 (347)
+..++.+.|+ |++|||+|||.|+++|+.+.. |.+.. ...|.++|.|++|+|.++|+ +|++||+|+++ ++
T Consensus 19 l~~~~~~~p~-~~~~evlv~v~a~~~n~~~~~---g~~~~-~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---~~ 87 (325)
T TIGR02825 19 FELKTVELPP-LNNGEVLLEALFLSVDPYMRV---AAKRL-KEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---PG 87 (325)
T ss_pred eEEEeccCCC-CCCCcEEEEEEEEecCHHHhc---ccCcC-CCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---cC
Confidence 4556799999 699999999999999996543 33322 23477999999999999773 69999999986 46
Q ss_pred ceeeEeeeCCCeeeC----CCCCCHHHH-ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEE
Q 019049 104 FAQFIVADQSELFPV----PKGCDLLAA-AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATII 178 (347)
Q Consensus 104 ~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~ 178 (347)
|++|++++.+.+.++ |++++++++ +++++++.|||+++...+++++|++|||+|++|++|++++|+|+..|++|+
T Consensus 88 ~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi 167 (325)
T TIGR02825 88 WTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVV 167 (325)
T ss_pred ceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEE
Confidence 999999999888777 999999997 678999999999998889999999999999999999999999999999999
Q ss_pred EEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCC---
Q 019049 179 AVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASG--- 255 (347)
Q Consensus 179 ~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~--- 255 (347)
++++++++.++++++|+++++++.+.+. ..+..+.+.++++|++|||+|++.+..++++++++|+++.+|....
T Consensus 168 ~~~~s~~~~~~~~~lGa~~vi~~~~~~~---~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~ 244 (325)
T TIGR02825 168 GAAGSDEKVAYLKKLGFDVAFNYKTVKS---LEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNR 244 (325)
T ss_pred EEeCCHHHHHHHHHcCCCEEEecccccc---HHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhccc
Confidence 9999999999999999999999876433 2333333445689999999999888999999999999999986532
Q ss_pred --CCCC-cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCccee
Q 019049 256 --EIPV-IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGK 332 (347)
Q Consensus 256 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk 332 (347)
..+. .....++.+++++.++....+ .+....+.++++++++.+|++++.+...|+++++++|++.+.+++..||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gk 321 (325)
T TIGR02825 245 TGPLPPGPPPEIVIYQELRMEGFIVNRW---QGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGK 321 (325)
T ss_pred CCCCCCCcchHHHhhhcceEeEEEehhh---hhhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCCCe
Confidence 1111 123345667888888765332 2223356788999999999999877788999999999999999999999
Q ss_pred EEEE
Q 019049 333 VMIA 336 (347)
Q Consensus 333 ~vv~ 336 (347)
+|++
T Consensus 322 vVv~ 325 (325)
T TIGR02825 322 TIVK 325 (325)
T ss_pred EEeC
Confidence 9974
No 40
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=7e-42 Score=306.66 Aligned_cols=304 Identities=25% Similarity=0.353 Sum_probs=259.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.. ..++++|.|++ +++||+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~p~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~ 67 (333)
T cd08296 1 YKAVQVTEPGGP-----------LELVERDVPLP-GPGEVLIKVEACGVCHSDAFVKEGAMPG-LSYPRVPGHEVVGRID 67 (333)
T ss_pred CeEEEEccCCCC-----------ceEEeccCCCC-CCCEEEEEEEEEecchHHHHHHhCCCCC-CCCCcccCcceeEEEE
Confidence 999999988543 44578999995 8999999999999999999999886543 3457899999999999
Q ss_pred EeCCCCCCCCCCCEEEE----------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCG----------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|++++++++||+|+. +...|++++|+.++.+.++++|+++++++++.+++
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~ 147 (333)
T cd08296 68 AVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLC 147 (333)
T ss_pred EECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhh
Confidence 99999999999999975 22358999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
++.++|+++.. .++.++++|+|+| +|++|++++++|+.+|++|+++++++++++.++++|+++++++...++ .+.
T Consensus 148 ~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~ 222 (333)
T cd08296 148 AGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDV---AEA 222 (333)
T ss_pred hhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccH---HHH
Confidence 99999999854 5899999999999 599999999999999999999999999999999999999998877665 333
Q ss_pred HHHHhcCCcccEEEeCCC-ccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049 213 FLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+.+. .++|+++|++| +..+..++++++++|+++.+|..... ..++...++.+++++.++.... ...
T Consensus 223 ~~~~---~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~~ 289 (333)
T cd08296 223 LQEL---GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEP-VAVSPLQLIMGRKSIHGWPSGT---------ALD 289 (333)
T ss_pred HHhc---CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCC-CCcCHHHHhhcccEEEEeCcCC---------HHH
Confidence 3333 36999999987 46778899999999999999876532 2344456678999999976433 356
Q ss_pred HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
++.+++++.++.+++.+ ..|+++++.+||+.+.+++..||+|++
T Consensus 290 ~~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 290 SEDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 77888889999888665 589999999999999999999999874
No 41
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.3e-42 Score=310.09 Aligned_cols=294 Identities=16% Similarity=0.183 Sum_probs=231.5
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCC---CCCCcccCCceeEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEK---PPLPFVPGSDYSGT 78 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~---~~~p~~~G~e~~G~ 78 (347)
|+.+++.++.. .+++.+.| . +++||+|||.++|||++|++.+.|.+... ..+|.++|||++|+
T Consensus 4 ~~~~~~~~~~~------------~~~~~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~ 69 (341)
T cd08237 4 QVYRLVRPKFF------------EVTYEEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGV 69 (341)
T ss_pred cceEEeccceE------------EEeecCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEE
Confidence 46666666643 33678888 3 89999999999999999999998865321 35799999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEe------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchH
Q 019049 79 VDAVGPNVSNFKVGDTVCGF------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAF 134 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~ 134 (347)
|+++|.+ +|++||||+.. ..+|+|+||++++++.++++|+++++++|| +..++
T Consensus 70 V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~ 146 (341)
T cd08237 70 VVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELV 146 (341)
T ss_pred EEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchH
Confidence 9998764 79999999753 235899999999999999999999999877 44689
Q ss_pred HHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHH-cC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049 135 GTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKV-CG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210 (347)
Q Consensus 135 ~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~-~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 210 (347)
+++|+++... +.+++|++|+|.|+ |++|++++|+++. .| ++|++++++++|++.+++.+++..++ ++
T Consensus 147 ~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~---- 217 (341)
T cd08237 147 SVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DI---- 217 (341)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hh----
Confidence 9999998543 45688999999997 9999999999986 55 58999999999999998866543221 11
Q ss_pred HHHHHHhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCch
Q 019049 211 KEFLKARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPH 286 (347)
Q Consensus 211 ~~~~~~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
....++|++|||+|+ ..+..++++++++|+++.+|..... ..++...++.+++++.++....
T Consensus 218 ------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~k~~~i~g~~~~~------- 283 (341)
T cd08237 218 ------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYP-VPINTRMVLEKGLTLVGSSRST------- 283 (341)
T ss_pred ------hhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCC-cccCHHHHhhCceEEEEecccC-------
Confidence 112369999999995 3578899999999999999975433 2345556788999999976432
Q ss_pred hHHHHHHHHHHHHHcC-----ceeeeeceeeChh---hHHHHHHHHHcCCcceeEEEEeC
Q 019049 287 VLEDSLRELLLWAAKG-----LITIHISHTYSPS---EANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 287 ~~~~~~~~~~~~l~~g-----~l~~~~~~~~~~~---~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
.+.++++++++.++ .+++.++++|+++ ++.++|+.+.++ ..||+|++++
T Consensus 284 --~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 284 --REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred --HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 35688899999998 4556788999985 566666655544 6789999875
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.7e-42 Score=305.31 Aligned_cols=291 Identities=18% Similarity=0.202 Sum_probs=232.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCC-hhhHHHHhccCCCC--CCCCcccCCceeE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLN-YANYLQILGKYQEK--PPLPFVPGSDYSG 77 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~-~~d~~~~~g~~~~~--~~~p~~~G~e~~G 77 (347)
|||+++.+++. +.+++.+.|+ |+++||+|||.++++| ++|++.+.|.++.. ..+|.++|||++|
T Consensus 2 ~ka~~~~~~~~------------l~~~e~~~p~-~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G 68 (308)
T TIGR01202 2 TQAIVLSGPNQ------------IELREVTLTP-PSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVG 68 (308)
T ss_pred ceEEEEeCCCe------------EEEEEecCCC-CCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEE
Confidence 78999987654 3346899999 6999999999999996 69999888876432 2579999999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEec---------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCC
Q 019049 78 TVDAVGPNVSNFKVGDTVCGFA---------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLS 148 (347)
Q Consensus 78 ~V~~vG~~v~~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 148 (347)
+|+++|+++ +|++||||+... ..|+|+||++++++.++++|++++++. +++ ..+.|||+++.. . ..
T Consensus 69 ~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~ 143 (308)
T TIGR01202 69 RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EV 143 (308)
T ss_pred EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-cc
Confidence 999999998 699999998532 149999999999999999999999864 444 457899999854 3 33
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
++++++|+|+ |++|++++|+|+.+|++ |++++.+++|++.+.+. .++|+.+. .+.++|++||
T Consensus 144 ~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-------------~~~g~Dvvid 206 (308)
T TIGR01202 144 KVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-------------PRRDYRAIYD 206 (308)
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-------------cCCCCCEEEE
Confidence 6889999986 99999999999999997 55666666676655543 34443211 2457999999
Q ss_pred CCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049 228 PVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 306 (347)
Q Consensus 228 ~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 306 (347)
|+|++ .+..++++++++|+++.+|..... ..++...++.+++++.++.... .+.++++++++.+|++++
T Consensus 207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~i~~~~~~~---------~~~~~~~~~l~~~g~i~~ 276 (308)
T TIGR01202 207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEP-VNFDFVPAFMKEARLRIAAEWQ---------PGDLHAVRELIESGALSL 276 (308)
T ss_pred CCCCHHHHHHHHHhhhcCcEEEEEeecCCC-cccccchhhhcceEEEEecccc---------hhHHHHHHHHHHcCCCCh
Confidence 99985 578999999999999999976533 2344556678888888765332 467899999999999986
Q ss_pred --eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 307 --HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 307 --~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.++++|+|+|+++||+.+.++...+|++++
T Consensus 277 ~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 277 DGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred hhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 489999999999999998877777899874
No 43
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=5.5e-41 Score=300.07 Aligned_cols=320 Identities=34% Similarity=0.468 Sum_probs=270.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~ 78 (347)
|||+++.+++.+.. +.+ .+.+.|. +.++||+|++.++++|++|+....|..+. ....|.++|||++|+
T Consensus 1 ~~a~~~~~~~~~~~--------~~~-~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~ 70 (324)
T cd08244 1 MRAIRLHEFGPPEV--------LVP-EDVPDPV-PGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGV 70 (324)
T ss_pred CeEEEEcCCCCccc--------eEE-eccCCCC-CCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEE
Confidence 99999988776532 233 4566677 48999999999999999999988776432 234578899999999
Q ss_pred EEEeCCCCCCCCCCCEEEEecC--CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEe
Q 019049 79 VDAVGPNVSNFKVGDTVCGFAA--LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVL 156 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~ 156 (347)
|+++|++++.+++||+|++... .|+|++|+.++.+.++++|+++++++++.+++.+.+|| ++...++++++++|+|+
T Consensus 71 v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~ 149 (324)
T cd08244 71 VDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVT 149 (324)
T ss_pred EEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEE
Confidence 9999999999999999999762 58999999999999999999999999999999999995 55578899999999999
Q ss_pred cCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHH
Q 019049 157 GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKE 236 (347)
Q Consensus 157 g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~ 236 (347)
|++|++|.+++++|+.+|++|+++++++++.+.++++|++.+++..+.++ .+.+.+.+++.++|+++||+|+.....
T Consensus 150 g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~ 226 (324)
T cd08244 150 AAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDW---PDQVREALGGGGVTVVLDGVGGAIGRA 226 (324)
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHcCCCCceEEEECCChHhHHH
Confidence 99999999999999999999999999999999999999998888877666 556666677778999999999887888
Q ss_pred HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhh
Q 019049 237 SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSE 316 (347)
Q Consensus 237 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~ 316 (347)
++++++++|+++.+|.........+....+.++.++.++..... .+....+.++++++++.++.+++.+.+.|++++
T Consensus 227 ~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 303 (324)
T cd08244 227 ALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQA---ERGGLRALEARALAEAAAGRLVPVVGQTFPLER 303 (324)
T ss_pred HHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccC---CHHHHHHHHHHHHHHHHCCCccCccceEEeHHH
Confidence 99999999999999876533223343455788889888775432 223445788889999999999877888999999
Q ss_pred HHHHHHHHHcCCcceeEEEEe
Q 019049 317 ANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 317 ~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++++.+.++...||+++++
T Consensus 304 ~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 304 AAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999999999999864
No 44
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.1e-41 Score=304.76 Aligned_cols=308 Identities=29% Similarity=0.461 Sum_probs=261.8
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~ 78 (347)
|||+++.++|++ ..+.+.+.|.+ .++||+|++.++++|++|+....|.++. ...+|.++|+|++|+
T Consensus 1 ~ka~~~~~~~~~-----------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~ 68 (340)
T cd05284 1 MKAARLYEYGKP-----------LRLEDVPVPEP-GPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGW 68 (340)
T ss_pred CeeeEeccCCCC-----------ceEEeCCCCCC-CCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEE
Confidence 899999988754 44457888884 8999999999999999999998887652 345688999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 131 (347)
|+++|+++.++++||+|+++. ..|+|++|+.++.++++++|+++++++++.++
T Consensus 69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~ 148 (340)
T cd05284 69 VEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLA 148 (340)
T ss_pred EEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhc
Confidence 999999999999999998763 25899999999999999999999999999999
Q ss_pred chHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049 132 VAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 209 (347)
Q Consensus 132 ~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 209 (347)
..+.|||+++... ..+.++++|||+|+ |++|++++|+|+.+| .+|+++++++++.+.++++|+++++++... +
T Consensus 149 ~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~--- 223 (340)
T cd05284 149 DAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-V--- 223 (340)
T ss_pred chHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-H---
Confidence 9999999998765 46889999999996 779999999999999 799999999999999999999999988765 5
Q ss_pred HHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhH
Q 019049 210 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 288 (347)
Q Consensus 210 ~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
..++.+.+.+.++|+++||+|+ .....++++++++|+++.+|.... ...+....+.+++++.++....
T Consensus 224 ~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--------- 292 (340)
T cd05284 224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT--------- 292 (340)
T ss_pred HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc---------
Confidence 5556666777789999999996 677889999999999999986543 2223333357888888765432
Q ss_pred HHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 289 EDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 289 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++++++++.++.+++ +.+.|++++++++++.+.+++..||+|+.+
T Consensus 293 ~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 RAELVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 367788999999999886 446799999999999999999999999764
No 45
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.3e-41 Score=304.69 Aligned_cols=312 Identities=29% Similarity=0.433 Sum_probs=261.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-----------------
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE----------------- 63 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~----------------- 63 (347)
||++++..++.++ .+.+.++.+.|. +.+++|+|||.++++|++|++.+.|.++.
T Consensus 1 ~~a~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~ 71 (350)
T cd08274 1 MRAVLLTGHGGLD--------KLVYRDDVPVPT-PAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWW 71 (350)
T ss_pred CeEEEEeccCCcc--------ceeecccCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccc
Confidence 8999998877652 234444567777 58999999999999999999988775431
Q ss_pred --CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec-------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049 64 --KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA-------------------ALGSFAQFIVADQSELFPVPKGC 122 (347)
Q Consensus 64 --~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~ 122 (347)
...+|.++|||++|+|+++|+++++|++||+|+... .+|++++|+.++.+.++++|+++
T Consensus 72 ~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~ 151 (350)
T cd08274 72 GGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPL 151 (350)
T ss_pred cCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCC
Confidence 234688999999999999999999999999998731 24899999999999999999999
Q ss_pred CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCC
Q 019049 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLS 202 (347)
Q Consensus 123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~ 202 (347)
++.+++++++.+.+||+++ ...+++++++|||+|++|++|++++++|+.+|+++++++.+. +++.++++|++.+++..
T Consensus 152 ~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~ 229 (350)
T cd08274 152 SDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRD 229 (350)
T ss_pred CHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCC
Confidence 9999999999999999988 778999999999999999999999999999999999998765 88888999987666544
Q ss_pred CCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc
Q 019049 203 NESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI 282 (347)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (347)
.... .+ ...+.+.++|++|||+|++.+..++++++++|+++.+|.........+...++.++.++.++....
T Consensus 230 ~~~~----~~-~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 301 (350)
T cd08274 230 APLL----AD-AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT--- 301 (350)
T ss_pred CccH----HH-HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC---
Confidence 3332 23 455677789999999999888999999999999999986543322344455578888888877532
Q ss_pred cCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 283 HRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 283 ~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++++++++.++.+++.+.+.|++++++++++.+.++...||+|+.+
T Consensus 302 ------~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 ------REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ------HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 4778999999999999877889999999999999999988889999853
No 46
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=8.9e-42 Score=300.88 Aligned_cols=311 Identities=34% Similarity=0.453 Sum_probs=253.6
Q ss_pred eeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCC---CCCcccCCcee---EEEEEeC-CCCCCCCCCCEE
Q 019049 23 IVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKP---PLPFVPGSDYS---GTVDAVG-PNVSNFKVGDTV 95 (347)
Q Consensus 23 ~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~---~~p~~~G~e~~---G~V~~vG-~~v~~~~~Gd~V 95 (347)
+.+.++.+.|. |.++|++|++.++++||.|+.+..|.++... .+|.+++.++. |.+...| ..+.....||.+
T Consensus 19 ~~~~~~~~iP~-~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~ 97 (347)
T KOG1198|consen 19 VLFSEEVPIPE-PEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV 97 (347)
T ss_pred eEEeecccCCC-CCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence 48888999999 6999999999999999999999999887655 67865555554 4455556 345668888888
Q ss_pred EEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc------CCCCCCEEEEecCCchHHHHHHHH
Q 019049 96 CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA------QLSSGQVLLVLGAAGGVGVAAVQI 169 (347)
Q Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~~~~VlI~g~~g~~G~~~~~l 169 (347)
+.....|+|+||++++...++++|+++++.+||++|.++.|||.++.+.. ++++|++|||+||+|++|++++|+
T Consensus 98 ~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQl 177 (347)
T KOG1198|consen 98 VAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQL 177 (347)
T ss_pred eeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEE
Q 019049 170 GKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILV 249 (347)
Q Consensus 170 a~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~ 249 (347)
|++.++..+++++++++.++++++|+++++||++.++ .+.+.+.+ +.+||+||||+|+........++...|+...
T Consensus 178 Ak~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~---~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~ 253 (347)
T KOG1198|consen 178 AKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENV---VELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLLKGGGGAY 253 (347)
T ss_pred HHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHH---HHHHHhhc-CCCccEEEECCCCCccccchhhhccCCceEE
Confidence 9999976666777788999999999999999999877 77777777 8899999999999888888888888887666
Q ss_pred EeecCCCCCCcchh----HhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHH
Q 019049 250 IGFASGEIPVIPAN----IALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIE 325 (347)
Q Consensus 250 ~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~ 325 (347)
++............ .+........+....++.+.......+.++.+.+++.+|++++.+.+.||++++.+|++++.
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~ 333 (347)
T KOG1198|consen 254 IGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLE 333 (347)
T ss_pred EEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHh
Confidence 65444322111111 01111111122222222222233336889999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeC
Q 019049 326 DRKVIGKVMIAFD 338 (347)
Q Consensus 326 ~~~~~gk~vv~~~ 338 (347)
++...||++++++
T Consensus 334 ~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 334 KSHATGKVVLEKD 346 (347)
T ss_pred hcCCcceEEEEec
Confidence 9999999999875
No 47
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=8.2e-41 Score=299.30 Aligned_cols=321 Identities=26% Similarity=0.326 Sum_probs=265.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++.++|.++. ..+++++.|. |+++||+|++.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus 2 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~ 70 (327)
T PRK10754 2 AKRIEFHKHGGPEV---------LQAVEFTPAD-PAENEVQVENKAIGINYIDTYIRSGLYPP-PSLPSGLGTEAAGVVS 70 (327)
T ss_pred ceEEEEeccCChhH---------eEEeeccCCC-CCCCEEEEEEEEEEcCHHHhhhcCCCCCC-CCCCCccCcceEEEEE
Confidence 89999999988753 4455788898 59999999999999999999988776643 2357789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA-ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 159 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~ 159 (347)
.+|++++++++||+|+... ..|+|++|+.++.+.++++|+++++++++.++..+.+||+++...+.+++|++|+|+|++
T Consensus 71 ~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 150 (327)
T PRK10754 71 KVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150 (327)
T ss_pred EeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCC
Confidence 9999999999999998653 358999999999999999999999999999999999999998778899999999999998
Q ss_pred chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239 (347)
Q Consensus 160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 239 (347)
|.+|++++|+++.+|++|++++.++++++.++++|++++++....++ .+.+.+.+.+.++|+++||+|+.....+++
T Consensus 151 g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~ 227 (327)
T PRK10754 151 GGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENI---VERVKEITGGKKVRVVYDSVGKDTWEASLD 227 (327)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcH---HHHHHHHcCCCCeEEEEECCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999988776665 556677778889999999999888888999
Q ss_pred ccccCCEEEEEeecCCCCCCcchhHhhhcceEE-EEEEeccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhh
Q 019049 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTV-HGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSE 316 (347)
Q Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~ 316 (347)
+++++|+++.+|.........+...+..++..+ .......+ ..++....+.++.+++++.+|.+++. +.+.|++++
T Consensus 228 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~ 306 (327)
T PRK10754 228 CLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGY-ITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKD 306 (327)
T ss_pred HhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecc-cCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHH
Confidence 999999999998665322222322222332221 11111111 22344455677889999999999864 578999999
Q ss_pred HHHHHHHHHcCCcceeEEEE
Q 019049 317 ANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 317 ~~~a~~~~~~~~~~gk~vv~ 336 (347)
++++++.+.++...+|+|+.
T Consensus 307 ~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 307 AQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHHHcCCCcceEEEe
Confidence 99999999999999999985
No 48
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.5e-40 Score=298.81 Aligned_cols=315 Identities=26% Similarity=0.329 Sum_probs=256.0
Q ss_pred ceEEeccc---CCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049 2 EALVCRKL---GDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT 78 (347)
Q Consensus 2 ~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~ 78 (347)
||+++.++ +.++. +...+.|.|. |+++||+|+|.++++|++|+..+.+..+. ..+|.++|+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~ 69 (336)
T TIGR02817 1 KAVGYKKPLPITDPDA---------LVDIDLPKPK-PGGRDLLVEVKAISVNPVDTKVRARMAPE-AGQPKILGWDAAGV 69 (336)
T ss_pred CceeeccccCCCCccc---------ceecccCCCC-CCCCEEEEEEEEEEcChHHHHHHcCCCCC-CCCCcccceeeEEE
Confidence 68999997 65543 5566889999 59999999999999999999988775432 34678899999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC-----C
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----G 150 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~ 150 (347)
|+++|+++++|++||+|+++. ..|+|++|++++.+.++++|+++++++++.+++.+.|||+++...+++++ |
T Consensus 70 V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g 149 (336)
T TIGR02817 70 VVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDK 149 (336)
T ss_pred EEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 999999999999999999874 35899999999999999999999999999999999999999988888887 9
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
++|||+|++|++|++++|+|+.+ |++|+++++++++.+.++++|+++++++.. ++ .+.+.+ ..+.++|+++|++
T Consensus 150 ~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~---~~~i~~-~~~~~vd~vl~~~ 224 (336)
T TIGR02817 150 RALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PL---KAQLEK-LGLEAVSYVFSLT 224 (336)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CH---HHHHHH-hcCCCCCEEEEcC
Confidence 99999999999999999999998 999999999999999999999999998654 44 333333 4556899999998
Q ss_pred Cc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEec-cccccCchhH--HHHHHHHHHHHHcCcee
Q 019049 230 GG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWG-SYKIHRPHVL--EDSLRELLLWAAKGLIT 305 (347)
Q Consensus 230 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~g~l~ 305 (347)
++ .....++++++++|+++.++... ..+...+..++.++.+..+. ......+... .+.++++++++.++.++
T Consensus 225 ~~~~~~~~~~~~l~~~G~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 300 (336)
T TIGR02817 225 HTDQHFKEIVELLAPQGRFALIDDPA----ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR 300 (336)
T ss_pred CcHHHHHHHHHHhccCCEEEEEcccc----cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee
Confidence 64 67788999999999999874221 12222334455666654433 1112222222 25788999999999998
Q ss_pred eeeceee---ChhhHHHHHHHHHcCCcceeEEEE
Q 019049 306 IHISHTY---SPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 306 ~~~~~~~---~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.+.+.+ +++++++|++.+.+++..||++++
T Consensus 301 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 301 TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 7655555 479999999999999999998875
No 49
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-40 Score=298.77 Aligned_cols=312 Identities=30% Similarity=0.454 Sum_probs=265.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++ +.. ..+++++.|. +.++||+|++.++++|++|+..+.+.++.....|.++|+|++|+|+
T Consensus 1 m~a~~~~~~~-~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~ 69 (341)
T cd08297 1 MKAAVVEEFG-EKP---------YEVKDVPVPE-PGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVV 69 (341)
T ss_pred CceEEeeccC-CCC---------ceEEEeeCCC-CCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEE
Confidence 9999999888 221 4446788899 5999999999999999999999888765444557789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|++++.+++||+|+.+. ..|+|++|+.++.+.++++|+++++.+++.++.
T Consensus 70 ~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~ 149 (341)
T cd08297 70 AVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLC 149 (341)
T ss_pred EeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHc
Confidence 9999999999999998641 258999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
.+.|||+++.. .+++++++|||+|+++++|++++++|+.+|++|+++++++++.+.++++|++.++++.+.++ ...
T Consensus 150 ~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 225 (341)
T cd08297 150 AGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDD---VEA 225 (341)
T ss_pred chHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccH---HHH
Confidence 99999999855 58999999999999888999999999999999999999999999999999999998877665 566
Q ss_pred HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049 213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+.+.+++.++|+++|+.++ .....++++++++|+++.+|.........+...+..++.++.+..... .+.
T Consensus 226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 296 (341)
T cd08297 226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT---------RQD 296 (341)
T ss_pred HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC---------HHH
Confidence 6777777889999997764 677889999999999999986553322333344557888888754332 478
Q ss_pred HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++++++.++.+++.+ ..|++++++++++.+..+...||++++|
T Consensus 297 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 297 LQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 88999999999998644 6799999999999999999999999875
No 50
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.6e-40 Score=294.95 Aligned_cols=316 Identities=24% Similarity=0.289 Sum_probs=257.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||++++.+++++. ..+++.|.|. ++++||+|++.++++|++|+....|.++....+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~ 70 (325)
T cd05280 1 FKALVVEEQDGGVS---------LFLRTLPLDD-LPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVV 70 (325)
T ss_pred CceEEEcccCCCCc---------ceEEeCCCCC-CCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEE
Confidence 99999999987533 4456889999 5999999999999999999999988765444567899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcC--CC-CCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ--LS-SGQ 151 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~--~~-~~~ 151 (347)
++ +++.+++||+|++.. .+|+|++|+.++++.++++|+++++++++.+++.+.++|+++..... +. .++
T Consensus 71 ~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~ 148 (325)
T cd05280 71 SS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDG 148 (325)
T ss_pred Ee--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCC
Confidence 98 466899999999853 36899999999999999999999999999999999999999865543 35 357
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|+|+|++|++|++++|+|+.+|++|+++++++++++.++++|++++++..+. .....+.+..+++|+++||+|+
T Consensus 149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~d~vi~~~~~ 223 (325)
T cd05280 149 PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL-----LDESKKPLLKARWAGAIDTVGG 223 (325)
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH-----HHHHHHHhcCCCccEEEECCch
Confidence 99999999999999999999999999999999999999999999988875432 1223344455679999999999
Q ss_pred cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT 311 (347)
Q Consensus 232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~ 311 (347)
..+..++++++++|+++.+|.............++.++.++.++..... .+....+.++.+.+++..+ +.+.+...
T Consensus 224 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 299 (325)
T cd05280 224 DVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNC---PMELRKQVWQKLATEWKPD-LLEIVVRE 299 (325)
T ss_pred HHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecC---chhHHHHHHHHHHHHHhcC-CccceeeE
Confidence 8889999999999999999865432112333334478888888765432 1223345667777777777 34457889
Q ss_pred eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 312 YSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 312 ~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
|++++++++++.+.+++..||+|+++
T Consensus 300 ~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 300 ISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 99999999999999999999999863
No 51
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2e-40 Score=303.66 Aligned_cols=318 Identities=26% Similarity=0.368 Sum_probs=260.5
Q ss_pred CceEEecc--cCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC------C---CCCCc
Q 019049 1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE------K---PPLPF 69 (347)
Q Consensus 1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~------~---~~~p~ 69 (347)
|||+++.. +|.+ .....++++|.|.+ +++||+|++.++++|++|++...+.... . ...+.
T Consensus 13 ~~a~~~~~~~~g~~--------~~~~~~~~~~~p~l-~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (393)
T cd08246 13 MYAFAIRPERYGDP--------AQAIQLEDVPVPEL-GPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83 (393)
T ss_pred hhheeeecccCCCc--------ccceEEeecCCCCC-CCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence 88988863 3433 12245567899994 9999999999999999999887664110 0 11235
Q ss_pred ccCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCC
Q 019049 70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKG 121 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~ 121 (347)
++|||++|+|+++|++++.+++||+|+.+. ..|+|++|+.++...++++|++
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~ 163 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH 163 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCC
Confidence 789999999999999999999999998764 2489999999999999999999
Q ss_pred CCHHHHccCcchHHHHHHHHHHh--cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE
Q 019049 122 CDLLAAAALPVAFGTSHVALVHR--AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV 199 (347)
Q Consensus 122 ~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~ 199 (347)
+++++++.+++++.+||+++... ++++++++|+|+|++|++|++++++|+.+|++++++++++++++.++++|+++++
T Consensus 164 l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i 243 (393)
T cd08246 164 LSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVI 243 (393)
T ss_pred CCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999998654 7889999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCc-------------------hhhHHHHHHHhcCC-cccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCC
Q 019049 200 DLSNESV-------------------IPSVKEFLKARKLK-GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV 259 (347)
Q Consensus 200 ~~~~~~~-------------------~~~~~~~~~~~~~~-~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 259 (347)
+.+..+. ....+.+.+.+++. ++|++|||+|+..+..++++++++|+++.+|........
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 323 (393)
T cd08246 244 NRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHT 323 (393)
T ss_pred cccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence 8654310 01145566677776 899999999987788999999999999999865432223
Q ss_pred cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcC-CcceeEEEE
Q 019049 260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVMIA 336 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~ 336 (347)
.....++.++.++.+++... .+.+..+++++.++.+.+.+.++|++++++++++.+.++ +..||+++-
T Consensus 324 ~~~~~l~~~~~~i~g~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 324 YDNRYLWMRQKRIQGSHFAN---------DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CcHHHHhhheeEEEecccCc---------HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 34455667788887765443 356788999999999987788899999999999999998 788998864
No 52
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3e-40 Score=295.13 Aligned_cols=309 Identities=28% Similarity=0.431 Sum_probs=267.0
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCc
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGS 103 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~ 103 (347)
..+++.+.|. ++++||+|++.++++|+.|+..+.+........|.++|+|++|+|+.+|++++++++||+|+++...|+
T Consensus 14 ~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~ 92 (323)
T cd05282 14 LELVSLPIPP-PGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGT 92 (323)
T ss_pred EEeEeCCCCC-CCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCc
Confidence 3345678888 499999999999999999999887766544456789999999999999999999999999999864599
Q ss_pred ceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049 104 FAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG 183 (347)
Q Consensus 104 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~ 183 (347)
|++|+.++.+.++++|+++++.+++.+++.+.+||+++...+.+.++++|+|+|++|.+|++++++|+.+|+++++++.+
T Consensus 93 ~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~ 172 (323)
T cd05282 93 WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR 172 (323)
T ss_pred ceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred hhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchh
Q 019049 184 AEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPAN 263 (347)
Q Consensus 184 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 263 (347)
+++++.++++|++.++++.+..+ ...+.+.+.+.++|+++||+|+......+++++++|+++.+|.........+..
T Consensus 173 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 249 (323)
T cd05282 173 DEQVEELKALGADEVIDSSPEDL---AQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRS 249 (323)
T ss_pred hHHHHHHHhcCCCEEecccchhH---HHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHH
Confidence 99999999999999998876555 566677777889999999999987788899999999999998665432223333
Q ss_pred HhhhcceEEEEEEecccccc-CchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 264 IALVKNWTVHGLYWGSYKIH-RPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.+..++.++.++....+... +|....+.++++++++.++.+.+.+.+.|++++++++++.+..+...||+|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 250 VFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 34448999999887665543 66666788999999999999987788899999999999999998888898863
No 53
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.2e-40 Score=299.14 Aligned_cols=310 Identities=27% Similarity=0.372 Sum_probs=259.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.+ +..++.+.|. ++++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+
T Consensus 3 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~Vkv~a~gi~~~d~~~~~g~~~--~~~p~v~G~e~~G~V~ 68 (365)
T cd08278 3 TTAAVVREPGGP-----------FVLEDVELDD-PRPDEVLVRIVATGICHTDLVVRDGGLP--TPLPAVLGHEGAGVVE 68 (365)
T ss_pred cEEeeeccCCCc-----------ceEEEeecCC-CCCCeEEEEEEEeecCcccHHHhcCCCC--CCCCcccccceeEEEE
Confidence 899999887654 3456888898 5999999999999999999999988764 3468899999999999
Q ss_pred EeCCCCCCCCCCCEEEEe-------------------------------------------------cCCCcceeeEeee
Q 019049 81 AVGPNVSNFKVGDTVCGF-------------------------------------------------AALGSFAQFIVAD 111 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~ 111 (347)
++|++++++++||+|+.. ...|+|++|+.++
T Consensus 69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~ 148 (365)
T cd08278 69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH 148 (365)
T ss_pred EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence 999999999999999841 1148899999999
Q ss_pred CCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049 112 QSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL 190 (347)
Q Consensus 112 ~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~ 190 (347)
+++++++|+++++++++.+++.+.+|++++...+.++++++|+|+|+ |++|++++|+|+..|+ ++++++.+++|.+.+
T Consensus 149 ~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~ 227 (365)
T cd08278 149 ERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA 227 (365)
T ss_pred chhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999888889999999999976 9999999999999999 689999999999999
Q ss_pred HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhc
Q 019049 191 KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVK 268 (347)
Q Consensus 191 ~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 268 (347)
+++|++.++++...++ .+.+.+.+ +.++|+++||+|+ ..+..++++++++|+++.+|.... .....+...++.+
T Consensus 228 ~~~g~~~~i~~~~~~~---~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 303 (365)
T cd08278 228 KELGATHVINPKEEDL---VAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVS 303 (365)
T ss_pred HHcCCcEEecCCCcCH---HHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhc
Confidence 9999999998877666 45566666 6789999999986 567899999999999999986532 2223444455578
Q ss_pred ceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee-eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 269 NWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI-HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~-~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.++.++..... .+ .+.++++++++.++.+++ .+...|++++++++++.+.+++.. |+|++
T Consensus 304 ~~~~~~~~~~~~---~~---~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 304 GKTIRGVIEGDS---VP---QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred CceEEEeecCCc---Ch---HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 888888764321 11 367788999999999865 355689999999999999887765 77663
No 54
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.4e-40 Score=297.93 Aligned_cols=310 Identities=26% Similarity=0.335 Sum_probs=253.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.. . +++.+.|. +.++||+|++.++++|++|++...+.+.. ..+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~~-----------~-l~~~~~p~-~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~ 66 (351)
T cd08285 1 MKAFAMLGIGKV-----------G-WIEKPIPV-CGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVE 66 (351)
T ss_pred CceEEEccCCcc-----------E-EEECCCCC-CCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEE
Confidence 999999998854 2 35788888 58999999999999999999988776543 3458899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHc
Q 019049 81 AVGPNVSNFKVGDTVCGFA------------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAA 128 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa 128 (347)
++|++++++++||+|+... .+|+|++|+.++.+ .++++|+++++++++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa 146 (351)
T cd08285 67 EVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAV 146 (351)
T ss_pred EecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhh
Confidence 9999999999999998732 25899999999974 899999999999999
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
.++..+.+||+++ ..++++++++|||+|+ |++|++++|+|+.+|+ .|+++++++++.+.++++|++.++++...++
T Consensus 147 ~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~- 223 (351)
T cd08285 147 MLPDMMSTGFHGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDV- 223 (351)
T ss_pred hhccchhhHHHHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCH-
Confidence 9999999999996 6788999999999975 9999999999999999 5899999999999999999999998877666
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCC-Ccch--hHhhhcceEEEEEEecccccc
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIP-VIPA--NIALVKNWTVHGLYWGSYKIH 283 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~ 283 (347)
.+.+...+.+.++|+++||+|+ ..+..++++++++|+++.+|....... ..+. .....+..++.+.....
T Consensus 224 --~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---- 297 (351)
T cd08285 224 --VEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG---- 297 (351)
T ss_pred --HHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCC----
Confidence 5556666667789999999997 567899999999999999986653211 1121 11123344444432111
Q ss_pred CchhHHHHHHHHHHHHHcCceee---eeceeeChhhHHHHHHHHHcCCc-ceeEEEEe
Q 019049 284 RPHVLEDSLRELLLWAAKGLITI---HISHTYSPSEANLAFSAIEDRKV-IGKVMIAF 337 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~~ 337 (347)
. .+.++++++++.+|++++ .+.+.++++++++|++.+.+++. ..|++++|
T Consensus 298 ~----~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 298 G----RLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred c----cccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1 256788999999999997 35567999999999999999874 67999864
No 55
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4e-40 Score=300.44 Aligned_cols=309 Identities=26% Similarity=0.327 Sum_probs=257.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.. .+++.+.|.+++++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~------------~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~ 67 (386)
T cd08283 1 MKALVWHGKGDV------------RVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG-MKKGDILGHEFMGVVE 67 (386)
T ss_pred CeeEEEecCCCc------------eEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC-CCCCccccccceEEEE
Confidence 999999866543 346788888435999999999999999999999887754 3468899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-----------------------------------------------CCCcceeeEeeeCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA-----------------------------------------------ALGSFAQFIVADQS 113 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~ 113 (347)
++|++++++++||+|+... ..|+|++|++++.+
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ 147 (386)
T cd08283 68 EVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFA 147 (386)
T ss_pred EeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccc
Confidence 9999999999999997642 14899999999987
Q ss_pred --CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 019049 114 --ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL 190 (347)
Q Consensus 114 --~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~ 190 (347)
.++++|++++++++++++..+++||+++ ..+++.++++|+|+|+ |++|.+++++|+..|+ +|+++++++++.+.+
T Consensus 148 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~ 225 (386)
T cd08283 148 DVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMA 225 (386)
T ss_pred cCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 8999999999999999999999999998 7889999999999976 9999999999999998 599999999999999
Q ss_pred HhcCCcEEEeCCCCC-chhhHHHHHHHhcCCcccEEEeCCCcc----------------------chHHHHhccccCCEE
Q 019049 191 KSLGVDHVVDLSNES-VIPSVKEFLKARKLKGVDVLYDPVGGK----------------------LTKESLKLLNWGAQI 247 (347)
Q Consensus 191 ~~~g~~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~v~d~~g~~----------------------~~~~~~~~l~~~G~~ 247 (347)
++++...++++...+ + .+.+...+.+.++|++|||+|++ .+..++++++++|++
T Consensus 226 ~~~~~~~vi~~~~~~~~---~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~i 302 (386)
T cd08283 226 RSHLGAETINFEEVDDV---VEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTV 302 (386)
T ss_pred HHcCCcEEEcCCcchHH---HHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEE
Confidence 998544677766553 4 55566677777899999999753 467889999999999
Q ss_pred EEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHH
Q 019049 248 LVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIE 325 (347)
Q Consensus 248 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~ 325 (347)
+.+|.........+....+.+++++.+.... ..+.++++++++.++++.+ .+.+.|+++++++|++.+.
T Consensus 303 v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~ 373 (386)
T cd08283 303 SIIGVYGGTVNKFPIGAAMNKGLTLRMGQTH---------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD 373 (386)
T ss_pred EEEcCCCCCcCccCHHHHHhCCcEEEeccCC---------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence 9998765432333444567888888876421 1467888999999999986 3678899999999999998
Q ss_pred cCC-cceeEEEE
Q 019049 326 DRK-VIGKVMIA 336 (347)
Q Consensus 326 ~~~-~~gk~vv~ 336 (347)
++. ..+|+|++
T Consensus 374 ~~~~~~~k~~~~ 385 (386)
T cd08283 374 KKEDGCIKVVLK 385 (386)
T ss_pred hCCCCeEEEEec
Confidence 876 56799985
No 56
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.8e-40 Score=289.82 Aligned_cols=303 Identities=31% Similarity=0.374 Sum_probs=254.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++.+++ |+. ...++.+.|. ++++||+|++.++++|+.|++...+. ..|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~v~v~~~~i~~~d~~~~~~~-----~~~~~~g~e~~G~v~ 64 (305)
T cd08270 1 MRALVVDPDA-PLR---------LRLGEVPDPQ-PAPHEALVRVAAISLNRGELKFAAER-----PDGAVPGWDAAGVVE 64 (305)
T ss_pred CeEEEEccCC-Cce---------eEEEecCCCC-CCCCEEEEEEEEEecCHHHHHhhccC-----CCCCcccceeEEEEE
Confidence 8999998866 532 3345788888 59999999999999999999876521 235689999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
++|+++.+|++||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... ++++|+|+|++|
T Consensus 65 ~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~ 143 (305)
T cd08270 65 RAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG 143 (305)
T ss_pred EeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence 9999999999999999987679999999999999999999999999999999999999998666555 599999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 240 (347)
++|.+++++++..|++|+++++++++.+.++++|++.+++... + .+. .++|+++||+|+.....++++
T Consensus 144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~----------~~~-~~~d~vl~~~g~~~~~~~~~~ 211 (305)
T cd08270 144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-E----------LSG-APVDLVVDSVGGPQLARALEL 211 (305)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-c----------ccC-CCceEEEECCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999876654221 1 112 479999999999888999999
Q ss_pred cccCCEEEEEeecCCCCCCcchhHhhh--cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHH
Q 019049 241 LNWGAQILVIGFASGEIPVIPANIALV--KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEAN 318 (347)
Q Consensus 241 l~~~G~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~ 318 (347)
++++|+++.+|.........+...+.. ++.++.++.+.. +....+.++.+++++.++++++.+.+.+++++++
T Consensus 212 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 286 (305)
T cd08270 212 LAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYD-----GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEID 286 (305)
T ss_pred hcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccC-----HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHH
Confidence 999999999986653322334333433 588888877553 3334578899999999999997788899999999
Q ss_pred HHHHHHHcCCcceeEEEEe
Q 019049 319 LAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 319 ~a~~~~~~~~~~gk~vv~~ 337 (347)
++++.+.++...||+|+.+
T Consensus 287 ~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 287 EAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHcCCCCceEEEeC
Confidence 9999999999999999864
No 57
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1e-39 Score=299.06 Aligned_cols=324 Identities=27% Similarity=0.366 Sum_probs=265.5
Q ss_pred CceEEecc--cCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC---------CCCCC-
Q 019049 1 MEALVCRK--LGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE---------KPPLP- 68 (347)
Q Consensus 1 m~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~---------~~~~p- 68 (347)
||||++.. +++|. . ...+++++.|. |+++||+|++.++++|++|++...+.... +...|
T Consensus 8 ~~a~~~~~~~~~~~~-------~-~~~~~~~~~p~-l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (398)
T TIGR01751 8 MYAFAIREERDGDPR-------Q-AIQLEVVPVPE-LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPF 78 (398)
T ss_pred hhheEEecccCCCcc-------c-ceEEeecCCCC-CCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCc
Confidence 89999965 67652 1 24446789999 59999999999999999998876553210 00223
Q ss_pred cccCCceeEEEEEeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCC
Q 019049 69 FVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPK 120 (347)
Q Consensus 69 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~ 120 (347)
.++|||++|+|+++|++++++++||+|+... ..|+|++|+.++.+.++++|+
T Consensus 79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~ 158 (398)
T TIGR01751 79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPK 158 (398)
T ss_pred eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCC
Confidence 3799999999999999999999999998753 248999999999999999999
Q ss_pred CCCHHHHccCcchHHHHHHHHHH--hcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE
Q 019049 121 GCDLLAAAALPVAFGTSHVALVH--RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV 198 (347)
Q Consensus 121 ~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v 198 (347)
++++++++.++..+.+||+++.. .+++.++++|+|+|++|++|++++|+|+.+|+++++++.++++.+.++++|++.+
T Consensus 159 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~ 238 (398)
T TIGR01751 159 HLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAV 238 (398)
T ss_pred CCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEE
Confidence 99999999999999999999854 4778999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCc-------------------hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCC
Q 019049 199 VDLSNESV-------------------IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPV 259 (347)
Q Consensus 199 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 259 (347)
+|.++.+. ....+.+.+.+.+.++|++|||+|...+..++++++++|+++.+|........
T Consensus 239 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 318 (398)
T TIGR01751 239 IDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHD 318 (398)
T ss_pred ecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCC
Confidence 98754310 01234556677778899999999987788899999999999999876543233
Q ss_pred cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCC
Q 019049 260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDD 339 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~ 339 (347)
.+...++.++.++.++.... .+.++++++++.++.+.+.+.+++++++++++++.+.++...||+|+++..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 389 (398)
T TIGR01751 319 YDNRYLWMRQKRIQGSHFAN---------LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA 389 (398)
T ss_pred cCHHHHhhcccEEEccccCc---------HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence 44455566777777765433 245678999999999998788999999999999999999999999999876
Q ss_pred CCC
Q 019049 340 MKS 342 (347)
Q Consensus 340 ~~~ 342 (347)
...
T Consensus 390 ~~~ 392 (398)
T TIGR01751 390 PRP 392 (398)
T ss_pred CCC
Confidence 543
No 58
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=5.1e-40 Score=298.42 Aligned_cols=310 Identities=32% Similarity=0.495 Sum_probs=262.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||||++.++|.+ +.+++.|.|. ++++||+|++.++++|++|+....+.++. .+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~ 66 (367)
T cd08263 1 MKAAVLKGPNPP-----------LTIEEIPVPR-PKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVV 66 (367)
T ss_pred CeeEEEecCCCC-----------cEEEEeeCCC-CCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEE
Confidence 999999988754 3346788888 58999999999999999999988876643 567899999999999
Q ss_pred EeCCCCCC---CCCCCEEEEe-------------------------------------------------cCCCcceeeE
Q 019049 81 AVGPNVSN---FKVGDTVCGF-------------------------------------------------AALGSFAQFI 108 (347)
Q Consensus 81 ~vG~~v~~---~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~ 108 (347)
.+|+++++ +++||+|++. ...|++++|+
T Consensus 67 ~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 146 (367)
T cd08263 67 EVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYA 146 (367)
T ss_pred EeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEE
Confidence 99999988 9999999872 1258999999
Q ss_pred eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 019049 109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI 187 (347)
Q Consensus 109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~ 187 (347)
.++.+.++++|+++++.+++.++..++|||+++...+.+.++++|+|+| +|++|.+++++|+..|++ |++++.++++.
T Consensus 147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~ 225 (367)
T cd08263 147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL 225 (367)
T ss_pred EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 9999999999999999999999999999999998888889999999996 599999999999999997 99999999999
Q ss_pred HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcchhHh
Q 019049 188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIPANIA 265 (347)
Q Consensus 188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~ 265 (347)
+.++++|++.+++.+..++ ..++.+.+.+.++|+++|++++. ....++++++++|+++.++..... ........+
T Consensus 226 ~~~~~~g~~~v~~~~~~~~---~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 302 (367)
T cd08263 226 AKAKELGATHTVNAAKEDA---VAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRL 302 (367)
T ss_pred HHHHHhCCceEecCCcccH---HHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHH
Confidence 9999999999999877666 55566667777899999999987 788899999999999999865422 122333334
Q ss_pred hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.++.++.++.... + .+.++++++++.++.+++. +++.++++++.++++.+.+++..||+|++
T Consensus 303 ~~~~~~~~~~~~~~-----~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 303 VRRGIKIIGSYGAR-----P---RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred hhCCeEEEecCCCC-----c---HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 46788877743211 1 3678889999999999863 67889999999999999999988999874
No 59
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.1e-40 Score=295.31 Aligned_cols=309 Identities=29% Similarity=0.458 Sum_probs=262.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||||++.+++.+ ..+++.+.|. +.++||+|++.++++|++|+....|..+. ..+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~ 67 (345)
T cd08260 1 MRAAVYEEFGEP-----------LEIREVPDPE-PPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVV 67 (345)
T ss_pred CeeEEEecCCCC-----------cEEEEccCCC-CCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEE
Confidence 999999988865 4456788899 48999999999999999999998887543 3557899999999999
Q ss_pred EeCCCCCCCCCCCEEEE---------------------------ecCCCcceeeEeeeCC--CeeeCCCCCCHHHHccCc
Q 019049 81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVADQS--ELFPVPKGCDLLAAAALP 131 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~ 131 (347)
.+|++++++++||+|++ +..+|+|++|+.++.. +++++|+++++++++.++
T Consensus 68 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~ 147 (345)
T cd08260 68 EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLG 147 (345)
T ss_pred EECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhc
Confidence 99999999999999986 4346999999999974 899999999999999999
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhH
Q 019049 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV 210 (347)
Q Consensus 132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~ 210 (347)
..+++||+++...+++.++++|+|+| +|++|++++|+|+..|++|++++.++++.+.++++|++.+++.+. .++ .
T Consensus 148 ~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---~ 223 (345)
T cd08260 148 CRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDV---A 223 (345)
T ss_pred cchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhH---H
Confidence 99999999987788899999999999 599999999999999999999999999999999999999998876 455 4
Q ss_pred HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEeccccccCchh
Q 019049 211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHV 287 (347)
Q Consensus 211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (347)
+.+...+.+ ++|++|||+|+ .....++++++++|+++.+|...... ...+...++.++.++.++....
T Consensus 224 ~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 294 (345)
T cd08260 224 AAVRDLTGG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP-------- 294 (345)
T ss_pred HHHHHHhCC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC--------
Confidence 555566655 89999999985 56788999999999999998664322 2234444557788888765422
Q ss_pred HHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 288 LEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 288 ~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.+.++++++++.++.+.+. +...+++++++++++.+.++...||+|++
T Consensus 295 -~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 295 -AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 4678889999999998853 67899999999999999999999998864
No 60
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=5.9e-40 Score=296.35 Aligned_cols=309 Identities=28% Similarity=0.421 Sum_probs=260.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC-----------CCCCCc
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE-----------KPPLPF 69 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~-----------~~~~p~ 69 (347)
|||+++..++.+ ..+++.|.|+ ++++||+|++.++++|++|++.+.|.++. ...+|.
T Consensus 1 ~~a~~~~~~~~~-----------~~~~~~~~p~-~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~ 68 (350)
T cd08240 1 MKAAAVVEPGKP-----------LEEVEIDTPK-PPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPL 68 (350)
T ss_pred CeeEEeccCCCC-----------ceEEecCCCC-CCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCc
Confidence 999999888765 3456889899 59999999999999999999998876532 224567
Q ss_pred ccCCceeEEEEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCC
Q 019049 70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGC 122 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~ 122 (347)
++|+|++|+|+++|++++++++||+|+++. ..|++++|+.++.+.++++|+++
T Consensus 69 ~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~ 148 (350)
T cd08240 69 VLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGL 148 (350)
T ss_pred ccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCC
Confidence 899999999999999999999999998761 35899999999999999999999
Q ss_pred CHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeC
Q 019049 123 DLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDL 201 (347)
Q Consensus 123 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~ 201 (347)
++.+++.+++.+.+||+++.....+.++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++.+++.
T Consensus 149 s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 227 (350)
T cd08240 149 DPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG 227 (350)
T ss_pred CHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC
Confidence 999999999999999999977777778999999975 9999999999999999 79999999999999999999888887
Q ss_pred CCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc
Q 019049 202 SNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY 280 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (347)
.+..+ .+.+.+...+ ++|++||++|. .....++++|+++|+++.+|...... ..+......++.++.++....
T Consensus 228 ~~~~~---~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~- 301 (350)
T cd08240 228 SDPDA---AKRIIKAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEA-TLPLPLLPLRALTIQGSYVGS- 301 (350)
T ss_pred CCccH---HHHHHHHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCC-cccHHHHhhcCcEEEEcccCC-
Confidence 76665 4455555555 89999999985 66788999999999999988654321 223333445778887766443
Q ss_pred cccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 281 KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.+.+..+++++.++.+++.+...|++++++++++.+.+++..||+++.
T Consensus 302 --------~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 302 --------LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred --------HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 367888999999999987677889999999999999999888999875
No 61
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.2e-39 Score=290.75 Aligned_cols=322 Identities=33% Similarity=0.488 Sum_probs=273.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.++. ..+++.+.|.+ .++||+|++.++++|++|+....+.++....+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~ 70 (323)
T cd05276 1 MKAIVIKEPGGPEV---------LELGEVPKPAP-GPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVV 70 (323)
T ss_pred CeEEEEecCCCccc---------ceEEecCCCCC-CCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEE
Confidence 99999998887643 33346677774 899999999999999999998877665545678899999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
++|+++.++++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.....+.++++|+|+|++|
T Consensus 71 ~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~ 150 (323)
T cd05276 71 AVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGAS 150 (323)
T ss_pred eeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcC
Confidence 99999999999999999976799999999999999999999999999999999999999988888899999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 240 (347)
++|++++++++..|++|+++++++++.+.++++|++.+++....++ ...+.+.+.+.++|++++++|+......+++
T Consensus 151 ~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~ 227 (323)
T cd05276 151 GVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDF---AEEVKEATGGRGVDVILDMVGGDYLARNLRA 227 (323)
T ss_pred hHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhH---HHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence 9999999999999999999999999999998899888888766555 4555566666789999999998778889999
Q ss_pred cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccc-cccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSY-KIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319 (347)
Q Consensus 241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~ 319 (347)
++++|+++.++..+..........++.++.++.++..... ....+....+.++++++++.++.+++...+.|+++++++
T Consensus 228 ~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (323)
T cd05276 228 LAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAE 307 (323)
T ss_pred hccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHH
Confidence 9999999999865432222333445578899998876654 234455556777888999999999877888999999999
Q ss_pred HHHHHHcCCcceeEEE
Q 019049 320 AFSAIEDRKVIGKVMI 335 (347)
Q Consensus 320 a~~~~~~~~~~gk~vv 335 (347)
+++.+.++...||+++
T Consensus 308 a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 308 AHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHhCCCcceEeC
Confidence 9999998888888763
No 62
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.8e-39 Score=290.60 Aligned_cols=317 Identities=24% Similarity=0.287 Sum_probs=249.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.++|++++ +..++.|.|. +.++||+|++.++++|++|.....+.......+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~ 70 (326)
T cd08289 1 FQALVVEKDEDDVS---------VSVKNLTLDD-LPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVV 70 (326)
T ss_pred CeeEEEeccCCcce---------eEEEEccCCC-CCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEE
Confidence 99999999887643 5567899998 5999999999999999999876653222223458899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc--C-CCCCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA--Q-LSSGQ 151 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~-~~~~~ 151 (347)
+.| +.++++||+|++.. ..|+|++|+.++++.++++|+++++++++.+++.+.|||.++.... . ..+++
T Consensus 71 ~~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~ 148 (326)
T cd08289 71 ESN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQG 148 (326)
T ss_pred EcC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCC
Confidence 954 57799999999874 3699999999999999999999999999999999999998875433 2 34578
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|+|+|++|++|.+++|+|+.+|++|+++++++++.+.++++|++++++..+. . .+.+... .+.++|+++||+|+
T Consensus 149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~~~-~~~~~d~vld~~g~ 223 (326)
T cd08289 149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-Q---EESIKPL-EKQRWAGAVDPVGG 223 (326)
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-H---HHHHHhh-ccCCcCEEEECCcH
Confidence 99999999999999999999999999999999999999999999888876543 1 2333333 35679999999998
Q ss_pred cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT 311 (347)
Q Consensus 232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~ 311 (347)
..+..++++++++|+++.+|.........+...++.++.++.++....... ....+.++.+.+.+..+.+...+.+.
T Consensus 224 ~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (326)
T cd08289 224 KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPM---ELRRRIWRRLATDLKPTQLLNEIKQE 300 (326)
T ss_pred HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCc---hHHHHHHHHHHhhcCccccccccceE
Confidence 888899999999999999997643222223445568889988875322100 11123444444444333333456889
Q ss_pred eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 312 YSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 312 ~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
|+++++++||+.+.+++..||+|+++
T Consensus 301 ~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 301 ITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eeHHHHHHHHHHHhcCcccceEEEeC
Confidence 99999999999999999999999863
No 63
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.1e-39 Score=294.44 Aligned_cols=308 Identities=25% Similarity=0.312 Sum_probs=257.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCC-CCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLN-SSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V 79 (347)
|||+++.+++.+ . +.++|.|. | .++||+|++.++++|++|++.+.|.++. ..+|.++|+|++|+|
T Consensus 1 ~ka~~~~~~~~~-----------~-~~~~~~p~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V 66 (347)
T cd05278 1 MKALVYLGPGKI-----------G-LEEVPDPK-IQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEV 66 (347)
T ss_pred CceEEEecCCce-----------E-EEEcCCCC-CCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEE
Confidence 899999887754 3 35788888 6 7899999999999999999999887654 456889999999999
Q ss_pred EEeCCCCCCCCCCCEEEEe------------------------------cCCCcceeeEeeeCC--CeeeCCCCCCHHHH
Q 019049 80 DAVGPNVSNFKVGDTVCGF------------------------------AALGSFAQFIVADQS--ELFPVPKGCDLLAA 127 (347)
Q Consensus 80 ~~vG~~v~~~~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~a 127 (347)
+++|++++++++||+|++. ..+|+|++|++++.+ +++++|++++++++
T Consensus 67 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~a 146 (347)
T cd05278 67 VEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDA 146 (347)
T ss_pred EEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHH
Confidence 9999999999999999862 125899999999997 89999999999999
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
+.++..+.+||+++ ...+++++++|||.|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|++.++++.+.++
T Consensus 147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 224 (347)
T cd05278 147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDI 224 (347)
T ss_pred hhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchH
Confidence 99999999999998 6788999999999875 9999999999999997 8999988888889999999999998877665
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 285 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
.+.+...+++.++|++||++|. ..+..++++++++|+++.+|..............+.+++++.+.....
T Consensus 225 ---~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 295 (347)
T cd05278 225 ---VEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV------ 295 (347)
T ss_pred ---HHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc------
Confidence 5556666777789999999987 677889999999999999985543321112223346777777654221
Q ss_pred hhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCc-ceeEEEE
Q 019049 286 HVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKV-IGKVMIA 336 (347)
Q Consensus 286 ~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~gk~vv~ 336 (347)
.+.++++++++.++.+++. +...|++++++++++.+..++. .+|+|++
T Consensus 296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred ---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 4678889999999999863 5678999999999999988776 6788875
No 64
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.4e-39 Score=288.56 Aligned_cols=313 Identities=33% Similarity=0.405 Sum_probs=269.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++.++. +. +++.+.|. ++++|++|++.++++|++|++...|.++.....|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~--------~~-~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~ 70 (336)
T cd08276 1 MKAWRLSGGGGLDN--------LK-LVEEPVPE-PGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVV 70 (336)
T ss_pred CeEEEEeccCCCcc--------eE-EEeccCCC-CCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEE
Confidence 99999998765432 33 34677777 5899999999999999999999888765544578889999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHH
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHV 139 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~ 139 (347)
++|++++++++||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+
T Consensus 71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~ 150 (336)
T cd08276 71 AVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWN 150 (336)
T ss_pred EeCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHH
Confidence 9999999999999999865 1588999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhHHHHHHHhc
Q 019049 140 ALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSVKEFLKARK 218 (347)
Q Consensus 140 ~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~~~~~ 218 (347)
++...+.+.+|++|+|+| +|++|++++++++..|++|++++.++++++.++++|++.+++... .++ ...+.+.++
T Consensus 151 ~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~ 226 (336)
T cd08276 151 ALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDW---GEEVLKLTG 226 (336)
T ss_pred HHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCH---HHHHHHHcC
Confidence 997788999999999996 599999999999999999999999999999999999999988766 455 555666777
Q ss_pred CCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHH
Q 019049 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLW 298 (347)
Q Consensus 219 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
+.++|.++|+++......++++++++|+++.+|..............+.++.++.++.... .+.+++++++
T Consensus 227 ~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l 297 (336)
T cd08276 227 GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS---------RAQFEAMNRA 297 (336)
T ss_pred CCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc---------HHHHHHHHHH
Confidence 7899999999998888899999999999999987654322334456678999999887543 4678888999
Q ss_pred HHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 299 AAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 299 l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.++.+.+...+.+++++++++++.+.+++..+|++++
T Consensus 298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999887777899999999999999998888999875
No 65
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.2e-39 Score=289.30 Aligned_cols=314 Identities=30% Similarity=0.452 Sum_probs=261.7
Q ss_pred CceEEecccCC--CCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGD--PTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~ 78 (347)
||||++.+++. ++ . ..+++.+.|. +.++||+|++.++++|++|++...|.++....+|.++|+|++|+
T Consensus 2 ~~~~~~~~~~~~~~~--------~-~~~~~~~~~~-~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~ 71 (329)
T cd08250 2 FRKLVVHRLSPNFRE--------A-TSIVDVPVPL-PGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGE 71 (329)
T ss_pred ceEEEeccCCCCccc--------C-ceEEecCCCC-CCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEE
Confidence 99999999887 43 3 3345788888 58999999999999999999998887654456788999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecC
Q 019049 79 VDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGA 158 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~ 158 (347)
|+.+|++++++++||+|+++. .|+|++|+.++.+.++++|++ +.+++.++.++.+||+++....++.++++|+|+|+
T Consensus 72 v~~vG~~v~~~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga 148 (329)
T cd08250 72 VVAVGEGVTDFKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAA 148 (329)
T ss_pred EEEECCCCCCCCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeC
Confidence 999999999999999999986 489999999999999999997 35677889999999999988889999999999999
Q ss_pred CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHH
Q 019049 159 AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESL 238 (347)
Q Consensus 159 ~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 238 (347)
+|.+|++++|+++..|++|+++++++++.+.++++|++.+++....++ .+.+.... +.++|+++|++|+.....++
T Consensus 149 ~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~~~-~~~vd~v~~~~g~~~~~~~~ 224 (329)
T cd08250 149 AGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDL---GEVLKKEY-PKGVDVVYESVGGEMFDTCV 224 (329)
T ss_pred ccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccH---HHHHHHhc-CCCCeEEEECCcHHHHHHHH
Confidence 999999999999999999999999999999999999988888766554 33333333 46899999999988888999
Q ss_pred hccccCCEEEEEeecCCCC----------CCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeee-
Q 019049 239 KLLNWGAQILVIGFASGEI----------PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIH- 307 (347)
Q Consensus 239 ~~l~~~G~~v~~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~- 307 (347)
++++++|+++.+|...... ...+ ...+.++.++.++....+.. ...+.++++++++.++.+++.
T Consensus 225 ~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 299 (329)
T cd08250 225 DNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK----LIPQHLDRLLQLYQRGKLVCEV 299 (329)
T ss_pred HHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH----HHHHHHHHHHHHHHCCCeeeeE
Confidence 9999999999998654320 1111 23467788888877544321 135678889999999999874
Q ss_pred -eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 308 -ISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 308 -~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.+.++++++++|++.+.+++..||+|++
T Consensus 300 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 300 DPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 45569999999999999998888898864
No 66
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=9.7e-40 Score=293.43 Aligned_cols=312 Identities=25% Similarity=0.350 Sum_probs=256.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..+| +.. +..++++.|+ |+++||+|++.++++|++|+....+.. ....|.++|||++|+|+
T Consensus 1 m~a~~~~~~~-~~~---------~~~~~~~~p~-~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~g~e~~G~v~ 67 (339)
T cd08249 1 QKAAVLTGPG-GGL---------LVVVDVPVPK-PGPDEVLVKVKAVALNPVDWKHQDYGF--IPSYPAILGCDFAGTVV 67 (339)
T ss_pred CceEEeccCC-CCc---------ccccCCCCCC-CCCCEEEEEEEEEEcCchheeeeeccc--ccCCCceeeeeeeEEEE
Confidence 9999999886 532 4457899999 599999999999999999998775543 12346789999999999
Q ss_pred EeCCCCCCCCCCCEEEEecC--------CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCC-----
Q 019049 81 AVGPNVSNFKVGDTVCGFAA--------LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL----- 147 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~----- 147 (347)
.+|++++.+++||+|+++.. +|+|++|++++.+.++++|+++++++++.+++.+.+||+++....++
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (339)
T cd08249 68 EVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPP 147 (339)
T ss_pred EeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCC
Confidence 99999999999999999853 48999999999999999999999999999999999999998766655
Q ss_pred -----CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049 148 -----SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 148 -----~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
.++++|+|+|++|.+|++++++++.+|++|++++ ++++.+.++++|++++++..+.++ .+.+.+.++ +++
T Consensus 148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~---~~~l~~~~~-~~~ 222 (339)
T cd08249 148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDV---VEDIRAATG-GKL 222 (339)
T ss_pred CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchH---HHHHHHhcC-CCe
Confidence 7899999999999999999999999999999888 568899999999999999877666 444545544 689
Q ss_pred cEEEeCCCc-cchHHHHhcccc--CCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccc---cCchhHHHHHHHHH
Q 019049 223 DVLYDPVGG-KLTKESLKLLNW--GAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKI---HRPHVLEDSLRELL 296 (347)
Q Consensus 223 d~v~d~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 296 (347)
|+++|++|+ ..+..+++++++ +|+++.++...... .+..+.++.......+.. ..+......++.+.
T Consensus 223 d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T cd08249 223 RYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP 295 (339)
T ss_pred eEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHH
Confidence 999999998 778899999999 99999997654321 112233333333322221 33444456788899
Q ss_pred HHHHcCceeeeeceeeC--hhhHHHHHHHHHcCC-cceeEEEEe
Q 019049 297 LWAAKGLITIHISHTYS--PSEANLAFSAIEDRK-VIGKVMIAF 337 (347)
Q Consensus 297 ~~l~~g~l~~~~~~~~~--~~~~~~a~~~~~~~~-~~gk~vv~~ 337 (347)
+++.++.+.+.+...++ ++++++|++.+.+++ ..+|+|+++
T Consensus 296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 99999999976666778 999999999999998 889999863
No 67
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.9e-39 Score=289.56 Aligned_cols=306 Identities=28% Similarity=0.452 Sum_probs=257.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++++++. ..+++++.|.+ .++||+|+|.++++|+.|+....+.++.. .+|.++|+|++|+|+
T Consensus 1 ~~a~~~~~~~~------------~~~~~~~~~~~-~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~ 66 (337)
T cd08261 1 MKALVCEKPGR------------LEVVDIPEPVP-GAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVV 66 (337)
T ss_pred CeEEEEeCCCc------------eEEEECCCCCC-CCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEE
Confidence 89999987753 44567899994 99999999999999999999988876543 457789999999999
Q ss_pred EeCCCCCCCCCCCEEEE---------------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCG---------------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++++++||+|++ +...|+|++|+.++++ ++++|+++++++++++ ..
T Consensus 67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~ 144 (337)
T cd08261 67 EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EP 144 (337)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-ch
Confidence 99999999999999987 3235899999999999 9999999999999877 67
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
++++++++ ...++.++++|||+|+ |.+|.+++|+|+.+|++|+++++++++.++++++|+++++++...++ .+.+
T Consensus 145 ~~~a~~~~-~~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~---~~~l 219 (337)
T cd08261 145 LAIGAHAV-RRAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDV---AARL 219 (337)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCH---HHHH
Confidence 88899887 7889999999999975 99999999999999999999999999999999999999998887665 5566
Q ss_pred HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 292 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
.+.+.+.++|+++||.|+ ..+..++++++++|+++.++...... ..+...+..+++++.+... ...+.+
T Consensus 220 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~ 289 (337)
T cd08261 220 RELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV-TFPDPEFHKKELTILGSRN---------ATREDF 289 (337)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCC-ccCHHHHHhCCCEEEEecc---------CChhhH
Confidence 667777789999999986 56788999999999999987554221 2233344556777766421 124678
Q ss_pred HHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcC-CcceeEEEEe
Q 019049 293 RELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAF 337 (347)
Q Consensus 293 ~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~ 337 (347)
+++++++.+|.+++ .+...+++++++++++.+.++ ...+|+|+++
T Consensus 290 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 290 PDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 88999999999987 678899999999999999988 4778999864
No 68
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.5e-39 Score=291.10 Aligned_cols=305 Identities=24% Similarity=0.355 Sum_probs=248.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++. ..+++++.|. |+++||+||+.++++|++|++.+.|..+. ..+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~------------~~~~~~~~p~-~~~~~vlV~v~~~gi~~~d~~~~~g~~~~-~~~p~i~G~e~~G~V~ 66 (339)
T PRK10083 1 MKSIVIEKPNS------------LAIEERPIPQ-PAAGEVRVKVKLAGICGSDSHIYRGHNPF-AKYPRVIGHEFFGVID 66 (339)
T ss_pred CeEEEEecCCe------------eEEEeccCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCc-CCCCcccccceEEEEE
Confidence 89999988764 3346889999 59999999999999999999998886643 2468899999999999
Q ss_pred EeCCCCCCCCCCCEEE---------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVC---------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++.+++||+|+ ++..+|+|++|+.++.+.++++|+++++++++ +..+
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~ 145 (339)
T PRK10083 67 AVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEP 145 (339)
T ss_pred EECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhch
Confidence 9999999999999998 44446899999999999999999999998876 5577
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHH-cCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKV-CGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~-~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 211 (347)
+.++|++ ...+++++|++|+|+|+ |++|++++|+|+. +|++ +++++++++|.+.++++|+++++++.+..+ .+
T Consensus 146 ~~~a~~~-~~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~---~~ 220 (339)
T PRK10083 146 FTIAANV-TGRTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPL---GE 220 (339)
T ss_pred HHHHHHH-HHhcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---HH
Confidence 8888864 47789999999999995 9999999999997 5995 777888899999999999999998876554 22
Q ss_pred HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049 212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290 (347)
Q Consensus 212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.+.. .+.++|++||++|. ..+..++++++++|+++.+|...... ......+..+++++.+.... .+
T Consensus 221 ~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~ 287 (339)
T PRK10083 221 ALEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPS-EIVQQGITGKELSIFSSRLN----------AN 287 (339)
T ss_pred HHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc-eecHHHHhhcceEEEEEecC----------hh
Confidence 2221 23356799999996 56889999999999999998764322 12233344566776665421 36
Q ss_pred HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcC-CcceeEEEEeC
Q 019049 291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDR-KVIGKVMIAFD 338 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~-~~~gk~vv~~~ 338 (347)
.++++++++.++.+++ .+.+.|+++++++|++.+.++ ...+|+|+.+.
T Consensus 288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 7888999999999987 378899999999999999865 45689999874
No 69
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.3e-39 Score=292.58 Aligned_cols=310 Identities=27% Similarity=0.431 Sum_probs=261.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.+ ..+++++.|++ +++||+|++.++++|+.|+..+.|.++ ..+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~p~~-~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~ 66 (363)
T cd08279 1 MRAAVLHEVGKP-----------LEIEEVELDDP-GPGEVLVRIAAAGLCHSDLHVVTGDLP--APLPAVLGHEGAGVVE 66 (363)
T ss_pred CeEEEEecCCCC-----------ceEEEeeCCCC-CCCeEEEEEEEeecCcHHHHHhcCCCC--CCCCccccccceEEEE
Confidence 999999998765 44568899994 999999999999999999998888664 3467789999999999
Q ss_pred EeCCCCCCCCCCCEEEEe-----------------------------------------------cCCCcceeeEeeeCC
Q 019049 81 AVGPNVSNFKVGDTVCGF-----------------------------------------------AALGSFAQFIVADQS 113 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~ 113 (347)
++|++++++++||+|++. ...|+|++|+.++++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (363)
T cd08279 67 EVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEA 146 (363)
T ss_pred EeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccc
Confidence 999999999999999983 135899999999999
Q ss_pred CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHh
Q 019049 114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS 192 (347)
Q Consensus 114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~ 192 (347)
.++++|+++++++++.+++++.+||+++...+++.++++|+|+|+ |++|.+++++|+..|++ |+++++++++.+.+++
T Consensus 147 ~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~ 225 (363)
T cd08279 147 SVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARR 225 (363)
T ss_pred cEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999888899999999999965 99999999999999996 9999999999999999
Q ss_pred cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHhhhcce
Q 019049 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIALVKNW 270 (347)
Q Consensus 193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~ 270 (347)
+|++++++....++ ..++.+.+.+.++|+++|++++ .....++++++++|+++.++.... ....++...+..++.
T Consensus 226 ~g~~~vv~~~~~~~---~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 302 (363)
T cd08279 226 FGATHTVNASEDDA---VEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEK 302 (363)
T ss_pred hCCeEEeCCCCccH---HHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCc
Confidence 99999998877666 5556666666789999999995 567889999999999999986542 222234444555677
Q ss_pred EEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEE
Q 019049 271 TVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVM 334 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~v 334 (347)
.+.++.+... ...+.++++++++.++.+++ .+.++|++++++++++.+.+++..+.++
T Consensus 303 ~~~~~~~~~~------~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 303 RLQGSLYGSA------NPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred EEEEEEecCc------CcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7777654321 12477889999999999986 3778899999999999999888775554
No 70
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.1e-38 Score=284.93 Aligned_cols=319 Identities=33% Similarity=0.479 Sum_probs=271.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++.+++.++. ..+++.+.|.+ .+++|+|++.++++|++|+....|..+.....|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~l-~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~ 70 (325)
T cd08253 1 MRAIRYHEFGAPDV---------LRLGDLPVPTP-GPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVE 70 (325)
T ss_pred CceEEEcccCCccc---------ceeeecCCCCC-CCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEE
Confidence 89999998876542 33457888885 899999999999999999998877665444578899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
.+|+++.+|++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+++++.+||+++....++.++++++|
T Consensus 71 ~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI 150 (325)
T cd08253 71 AVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLV 150 (325)
T ss_pred eeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEE
Confidence 9999999999999999875 35899999999999999999999999999999999999999988899999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 235 (347)
+|+++++|++++++++..|++|+++++++++.+.++++|++.+++....++ .+.+.+.+.+.++|++++|+|.....
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~ 227 (325)
T cd08253 151 HGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDL---ADRILAATAGQGVDVIIEVLANVNLA 227 (325)
T ss_pred EcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCH---HHHHHHHcCCCceEEEEECCchHHHH
Confidence 999999999999999999999999999999999999999998888776665 55566666667899999999988788
Q ss_pred HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS 315 (347)
Q Consensus 236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~ 315 (347)
..+++++++|+++.++... .....+...++.++.++.+.... ...+....+.++.+.+++.++.+++.....++++
T Consensus 228 ~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 303 (325)
T cd08253 228 KDLDVLAPGGRIVVYGSGG-LRGTIPINPLMAKEASIRGVLLY---TATPEERAAAAEAIAAGLADGALRPVIAREYPLE 303 (325)
T ss_pred HHHHhhCCCCEEEEEeecC-CcCCCChhHHHhcCceEEeeehh---hcCHHHHHHHHHHHHHHHHCCCccCccccEEcHH
Confidence 8899999999999998654 22223333446677777766532 2344455677888888999999987788899999
Q ss_pred hHHHHHHHHHcCCcceeEEEE
Q 019049 316 EANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 316 ~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+++++++.+.++...||++++
T Consensus 304 ~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 304 EAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred HHHHHHHHHHcCCCcceEEEe
Confidence 999999999998889999875
No 71
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5.4e-39 Score=288.85 Aligned_cols=306 Identities=22% Similarity=0.336 Sum_probs=252.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++++++.++ .++++|.|. ++++||+||+.++++|++|++.+.|..+. ..|.++|||++|+|+
T Consensus 1 mka~~~~~~~~~~-----------~~~~~~~p~-~~~~evlv~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~ 66 (338)
T PRK09422 1 MKAAVVNKDHTGD-----------VVVEKTLRP-LKHGEALVKMEYCGVCHTDLHVANGDFGD--KTGRILGHEGIGIVK 66 (338)
T ss_pred CeEEEecCCCCCc-----------eEEEecCCC-CCCCeEEEEEEEEeechhHHHHHcCCCCC--CCCccCCcccceEEE
Confidence 9999999988752 246889999 59999999999999999999988876542 236789999999999
Q ss_pred EeCCCCCCCCCCCEEEE-----------ec-----------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCG-----------FA-----------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|+++++|++||+|+. ++ .+|++++|+.++.++++++|+++++.+++.++.
T Consensus 67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~ 146 (338)
T PRK09422 67 EVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITC 146 (338)
T ss_pred EECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhc
Confidence 99999999999999985 11 258999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCC-CCchhhH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSN-ESVIPSV 210 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~ 210 (347)
.+.|||+++ ..++++++++|||+|+ |++|++++++|+.. |++|+++++++++++.++++|++.++++.. .++ .
T Consensus 147 ~~~ta~~~~-~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~---~ 221 (338)
T PRK09422 147 AGVTTYKAI-KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDV---A 221 (338)
T ss_pred chhHHHHHH-HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccH---H
Confidence 999999998 7789999999999995 99999999999984 999999999999999999999999888754 333 3
Q ss_pred HHHHHHhcCCcccE-EEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 211 KEFLKARKLKGVDV-LYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 211 ~~~~~~~~~~~~d~-v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+.+.+.++ ++|. ++++.++..+..++++++++|+++.+|...... ..+...+..++.++.++.... .
T Consensus 222 ~~v~~~~~--~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~ 289 (338)
T PRK09422 222 KIIQEKTG--GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESM-DLSIPRLVLDGIEVVGSLVGT---------R 289 (338)
T ss_pred HHHHHhcC--CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCc-eecHHHHhhcCcEEEEecCCC---------H
Confidence 44444443 6884 455555577889999999999999998654322 233344556777776654322 3
Q ss_pred HHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049 290 DSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 290 ~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
+.++.+++++.+|.+.+.+. .+++++++++|+.+.++...||+++.+.
T Consensus 290 ~~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 290 QDLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 66888999999999876554 6899999999999999999999998753
No 72
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.9e-39 Score=289.28 Aligned_cols=305 Identities=29% Similarity=0.425 Sum_probs=256.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++++ ..+++.|.|+ +.++||+|++.++++|++|++...|..+. ..+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~ 67 (334)
T PRK13771 1 MKAVILPGFKQG-----------YRIEEVPDPK-PGKDEVVIKVNYAGLCYRDLLQLQGFYPR-MKYPVILGHEVVGTVE 67 (334)
T ss_pred CeeEEEcCCCCC-----------cEEEeCCCCC-CCCCeEEEEEEEEeechhhHHHhcCCCCC-CCCCeeccccceEEEE
Confidence 999999998874 4456789999 59999999999999999999988876542 3457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++.+++||+|+++. .+|+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 68 ~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~ 147 (334)
T PRK13771 68 EVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCV 147 (334)
T ss_pred EeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccch
Confidence 9999998899999999863 1589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++... .+.++++|+|+|++|.+|++++|+++..|++|+++++++++.+.++++ ++++++.. ++ .+.+
T Consensus 148 ~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~---~~~v 220 (334)
T PRK13771 148 TGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KF---SEEV 220 (334)
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hH---HHHH
Confidence 99999998655 899999999999999999999999999999999999999999998888 77666554 33 3333
Q ss_pred HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCC-CcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP-VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 292 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
.+. .++|+++||+|+.....++++++++|+++.+|....... .......+.++.++.+.... ..+.+
T Consensus 221 ~~~---~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 288 (334)
T PRK13771 221 KKI---GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---------TKRDV 288 (334)
T ss_pred Hhc---CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---------CHHHH
Confidence 332 269999999998878899999999999999987543221 12233345678888776321 14678
Q ss_pred HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
+.+++++.++.+++.+.+.|++++++++|+.+.++...||+++.+
T Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 289 EEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 899999999999877888999999999999999988889999864
No 73
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=8.2e-39 Score=290.37 Aligned_cols=310 Identities=24% Similarity=0.358 Sum_probs=248.8
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||.++.+++++ ..++++|.|. +.++||+||+.++++|++|++.+.|.+. ..+|.++|||++|+|+
T Consensus 8 ~~a~~~~~~~~~-----------~~l~~~p~p~-~~~~~vlvkv~~~gi~~~D~~~~~g~~~--~~~p~v~G~e~~G~V~ 73 (373)
T cd08299 8 CKAAVLWEPKKP-----------FSIEEIEVAP-PKAHEVRIKIVATGICRSDDHVVSGKLV--TPFPVILGHEAAGIVE 73 (373)
T ss_pred eEEEEEecCCCC-----------cEEEEeecCC-CCCCEEEEEEEEEEcCcccHHHhcCCCC--CCCCccccccceEEEE
Confidence 678888776654 3446899999 5999999999999999999999988753 3568899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQ 112 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~ 112 (347)
++|+++..+++||+|+.+. ..|+|++|++++.
T Consensus 74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~ 153 (373)
T cd08299 74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE 153 (373)
T ss_pred EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence 9999999999999998641 2489999999999
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
+.++++|+++++++++.+++++.+||+++...++++++++|+|+|+ |++|++++++++..|+ +|+++++++++++.++
T Consensus 154 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~ 232 (373)
T cd08299 154 IAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAK 232 (373)
T ss_pred cceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 9999999999999999999999999999878899999999999976 9999999999999999 8999999999999999
Q ss_pred hcCCcEEEeCCCCC--chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhc-cccCCEEEEEeecCCCCCCcchhH-hh
Q 019049 192 SLGVDHVVDLSNES--VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKL-LNWGAQILVIGFASGEIPVIPANI-AL 266 (347)
Q Consensus 192 ~~g~~~v~~~~~~~--~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~-l~~~G~~v~~g~~~~~~~~~~~~~-~~ 266 (347)
++|++++++..+.+ + .+.+.+.+. +++|+++||+|. ..+..++.. ++++|+++.+|..... ...+... .+
T Consensus 233 ~lGa~~~i~~~~~~~~~---~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-~~~~~~~~~~ 307 (373)
T cd08299 233 ELGATECINPQDYKKPI---QEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-QNLSINPMLL 307 (373)
T ss_pred HcCCceEecccccchhH---HHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC-ceeecCHHHH
Confidence 99999998876533 3 344455555 589999999996 556665654 4679999999876432 1112111 24
Q ss_pred hcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 267 VKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.++.++.++....+.. .+.+.+.++.+.++.++ +.+.+.|+++++.+|++.+.+++.. |+++.+
T Consensus 308 ~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~-k~~~~~ 373 (373)
T cd08299 308 LTGRTWKGAVFGGWKS------KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSI-RTVLTF 373 (373)
T ss_pred hcCCeEEEEEecCCcc------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcc-eEEEeC
Confidence 5677888877655421 24455666667666554 3478999999999999998877654 777653
No 74
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=9.7e-39 Score=286.49 Aligned_cols=305 Identities=31% Similarity=0.478 Sum_probs=255.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++.+ ..+++.|.|. +.++||+|++.++++|++|++...|.++. ...|.++|+|++|+|+
T Consensus 1 m~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~v~ 67 (332)
T cd08259 1 MKAAILHKPNKP-----------LQIEEVPDPE-PGPGEVLIKVKAAGVCYRDLLFWKGFFPR-GKYPLILGHEIVGTVE 67 (332)
T ss_pred CeEEEEecCCCc-----------eEEEEccCCC-CCCCeEEEEEEEEecchhhhHHhcCCCCC-CCCCeeccccceEEEE
Confidence 899999874433 4456889999 48999999999999999999999886653 3457889999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
++|++++++++||+|+++. ..|+|++|+.++...++++|+++++++++.++++
T Consensus 68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 147 (332)
T cd08259 68 EVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACV 147 (332)
T ss_pred EECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccH
Confidence 9999999999999999874 1589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++.. +.+.++++++|+|++|++|++++++++..|++|+++++++++.+.++++|.+.+++..+ + .+.+
T Consensus 148 ~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~ 221 (332)
T cd08259 148 VGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--F---SEDV 221 (332)
T ss_pred HHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--H---HHHH
Confidence 9999999866 88999999999999999999999999999999999999999999998899887776543 3 2333
Q ss_pred HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.+. .++|++++++|......++++++++|+++.++................++.++.++... ..+.++
T Consensus 222 ~~~---~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 289 (332)
T cd08259 222 KKL---GGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA---------TKADVE 289 (332)
T ss_pred Hhc---cCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC---------CHHHHH
Confidence 322 27999999999888888999999999999998654332222333334566666665311 146788
Q ss_pred HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
++++++.++.+++.+.+.|++++++++|+.+.+++..||+|++
T Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 290 EALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 8999999999987788899999999999999999888998874
No 75
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.5e-38 Score=282.81 Aligned_cols=313 Identities=25% Similarity=0.285 Sum_probs=254.4
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++.+.|.|++ ..++++|.|. ++++||+|++.++++|++|++.+.|.++....+|.++|||++|+|+.
T Consensus 1 ~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~ 70 (323)
T TIGR02823 1 KALVVEKEDGKVS---------AQVETLDLSD-LPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS 70 (323)
T ss_pred CeEEEccCCCCcc---------eeEeecCCCC-CCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe
Confidence 6889988887753 5578899999 59999999999999999999999887644345688899999999988
Q ss_pred eCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh--cCCCCCC-E
Q 019049 82 VGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR--AQLSSGQ-V 152 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~-~ 152 (347)
+++.+|++||+|+++. .+|++++|+.++.+.++++|+++++++++.++..+.+|+.++... +++.+++ +
T Consensus 71 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~ 148 (323)
T TIGR02823 71 --SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP 148 (323)
T ss_pred --cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCce
Confidence 5677899999999874 358999999999999999999999999999999999999887433 3488898 9
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 232 (347)
|+|+|++|.+|.+++++|+.+|+++++++.++++++.++++|++.+++..+.. ..+...+. .++|.++||+|+.
T Consensus 149 vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~~-~~~d~vld~~g~~ 222 (323)
T TIGR02823 149 VLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLS-----PPGKPLEK-ERWAGAVDTVGGH 222 (323)
T ss_pred EEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHH-----HHHHHhcC-CCceEEEECccHH
Confidence 99999999999999999999999999999989989999999998888754322 12223333 3599999999988
Q ss_pred chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceee
Q 019049 233 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTY 312 (347)
Q Consensus 233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~ 312 (347)
.+..++++++++|+++.+|.........+...++.++.++.++..... ......+.++.+.+++..+.+.+. ...|
T Consensus 223 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 298 (323)
T TIGR02823 223 TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYC---PMALREAAWQRLATDLKPRNLESI-TREI 298 (323)
T ss_pred HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecccc---CchhHHHHHHHHHHHhhcCCCcCc-eeee
Confidence 888899999999999999876432222233345578888888764321 112223556777778888887654 5589
Q ss_pred ChhhHHHHHHHHHcCCcceeEEEE
Q 019049 313 SPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 313 ~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+++++++||+.+.+++..||+|+.
T Consensus 299 ~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 299 TLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred cHHHHHHHHHHHhCCCccceEEEe
Confidence 999999999999999999999875
No 76
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.3e-38 Score=289.59 Aligned_cols=306 Identities=24% Similarity=0.285 Sum_probs=250.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++..++. +.++++|.|.+|+++||+|++.++++|++|++.+.|.++ ..+|.++|||++|+|+
T Consensus 1 m~~~~~~~~~~------------~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~--~~~p~~~g~e~~G~V~ 66 (375)
T cd08282 1 MKAVVYGGPGN------------VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG--AEPGLVLGHEAMGEVE 66 (375)
T ss_pred CceEEEecCCc------------eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC--CCCCceeccccEEEEE
Confidence 89999977663 445788989844789999999999999999999988765 3458899999999999
Q ss_pred EeCCCCCCCCCCCEEEE-------ec------------------------------CCCcceeeEeeeCC--CeeeCCCC
Q 019049 81 AVGPNVSNFKVGDTVCG-------FA------------------------------ALGSFAQFIVADQS--ELFPVPKG 121 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~ 121 (347)
++|++++++++||+|+. .+ .+|+|++|+.++.. .++++|++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 67 EVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred EeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCC
Confidence 99999999999999976 21 13889999999975 89999999
Q ss_pred CCHH---HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcE
Q 019049 122 CDLL---AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDH 197 (347)
Q Consensus 122 ~~~~---~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~ 197 (347)
++++ +++.++.++++||+++ ..+++.+|++|+|.|+ |++|++++|+++..|+ +|+++++++++.+.++++|+.
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~- 223 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI- 223 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-
Confidence 9998 5677888999999998 7889999999999776 9999999999999998 899999999999999999984
Q ss_pred EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccc------------hHHHHhccccCCEEEEEeecCCC-C-------
Q 019049 198 VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKL------------TKESLKLLNWGAQILVIGFASGE-I------- 257 (347)
Q Consensus 198 v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~------------~~~~~~~l~~~G~~v~~g~~~~~-~------- 257 (347)
.+++.+.++ .+.+.+.+. +++|+++||+|.+. +..++++++++|+++.+|..... .
T Consensus 224 ~v~~~~~~~---~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~ 299 (375)
T cd08282 224 PIDFSDGDP---VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAA 299 (375)
T ss_pred EeccCcccH---HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccc
Confidence 566665555 455555665 68999999999763 78889999999999988764321 1
Q ss_pred ----CCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcce
Q 019049 258 ----PVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIG 331 (347)
Q Consensus 258 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~g 331 (347)
..++...++.++..+.+.... ..+.+..+++++.++.+++ .+.+.|++++++++++.+.+++ .+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~ 369 (375)
T cd08282 300 KQGELSFDFGLLWAKGLSFGTGQAP---------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ET 369 (375)
T ss_pred cCccccccHHHHHhcCcEEEEecCC---------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ce
Confidence 112334455666655543211 1467788899999999986 3889999999999999999988 88
Q ss_pred eEEEEe
Q 019049 332 KVMIAF 337 (347)
Q Consensus 332 k~vv~~ 337 (347)
|+|+++
T Consensus 370 kvvv~~ 375 (375)
T cd08282 370 KVVIKP 375 (375)
T ss_pred EEEeCC
Confidence 999753
No 77
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.4e-38 Score=281.02 Aligned_cols=320 Identities=32% Similarity=0.433 Sum_probs=268.7
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+.+..++.+.. +. +.+.+.|. +.++||+|++.++++|+.|++...+..+. .+|.++|||++|+|+.
T Consensus 1 ~~~~~~~~~~~~~--------~~-~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~ 68 (320)
T cd05286 1 KAVRIHKTGGPEV--------LE-YEDVPVPE-PGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEA 68 (320)
T ss_pred CeEEEecCCCccc--------eE-EeecCCCC-CCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEE
Confidence 5677776665532 22 34566666 48999999999999999999988776542 4577899999999999
Q ss_pred eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049 82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~ 161 (347)
+|+++.++++||+|+++...|++++|+.++.+.++++|+++++.+++.++....++|+++...+++.++++|+|+|++|+
T Consensus 69 ~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~ 148 (320)
T cd05286 69 VGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG 148 (320)
T ss_pred ECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 99999999999999998535899999999999999999999999999999999999999988899999999999999899
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049 162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 241 (347)
Q Consensus 162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 241 (347)
+|.+++++++.+|++|++++.++++.+.++++|++.+++.....+ ...+...+.+.++|.+++|+++.....+++++
T Consensus 149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l 225 (320)
T cd05286 149 VGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDF---VERVREITGGRGVDVVYDGVGKDTFEGSLDSL 225 (320)
T ss_pred HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhH---HHHHHHHcCCCCeeEEEECCCcHhHHHHHHhh
Confidence 999999999999999999999999999999999998887766555 55566667777899999999988788899999
Q ss_pred ccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHH
Q 019049 242 NWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAF 321 (347)
Q Consensus 242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~ 321 (347)
+++|+++.+|........++...+..+++++.++....+. ..+....+.++++++++.++.+++.+.+.|+++++++++
T Consensus 226 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 304 (320)
T cd05286 226 RPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYI-ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAH 304 (320)
T ss_pred ccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhc-CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHH
Confidence 9999999998655432233333344788888876654443 455666678889999999999987777899999999999
Q ss_pred HHHHcCCcceeEEEEe
Q 019049 322 SAIEDRKVIGKVMIAF 337 (347)
Q Consensus 322 ~~~~~~~~~gk~vv~~ 337 (347)
+.+.++...+++++++
T Consensus 305 ~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 305 RDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHcCCCCceEEEeC
Confidence 9999988889998753
No 78
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.2e-38 Score=287.78 Aligned_cols=305 Identities=19% Similarity=0.308 Sum_probs=251.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC------C--CCCCcccC
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE------K--PPLPFVPG 72 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~------~--~~~p~~~G 72 (347)
|||+++.+++.. .+++.+.|+ ++++||+|++.++++|+.|+..+.|.... + ..+|.++|
T Consensus 1 mka~~~~~~~~~------------~~~~~~~p~-~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g 67 (350)
T cd08256 1 MRAVVCHGPQDY------------RLEEVPVPR-PGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPG 67 (350)
T ss_pred CeeEEEecCCce------------EEEECCCCC-CCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccC
Confidence 999999877653 346788899 59999999999999999999988775311 0 13577899
Q ss_pred CceeEEEEEeCCCCC--CCCCCCEEEE---------------------------e--cCCCcceeeEeeeCC-CeeeCCC
Q 019049 73 SDYSGTVDAVGPNVS--NFKVGDTVCG---------------------------F--AALGSFAQFIVADQS-ELFPVPK 120 (347)
Q Consensus 73 ~e~~G~V~~vG~~v~--~~~~Gd~V~~---------------------------~--~~~g~~~~~~~~~~~-~~~~~p~ 120 (347)
||++|+|+++|+.++ +|++||+|++ + ...|+|++|+.++++ .++++|+
T Consensus 68 ~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~ 147 (350)
T cd08256 68 HEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPD 147 (350)
T ss_pred cceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCC
Confidence 999999999999998 8999999986 3 135899999999987 6789999
Q ss_pred CCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEE
Q 019049 121 GCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVV 199 (347)
Q Consensus 121 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~ 199 (347)
++++++++.+ .+++++|+++ ..+++.++++|+|.|+ |++|++++++|+.+|++ ++++++++++.+.++++|++.++
T Consensus 148 ~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~ 224 (350)
T cd08256 148 DIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVL 224 (350)
T ss_pred CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEe
Confidence 9999999988 8999999998 7889999999999554 99999999999999985 77888888999999999999998
Q ss_pred eCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHh-hhcceEEEEEEe
Q 019049 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIA-LVKNWTVHGLYW 277 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 277 (347)
+....++ ..++.+.+.+.++|+++|++|. ..+..++++++++|+++.+|...... ..+...+ ..+++++.++..
T Consensus 225 ~~~~~~~---~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~i~~~~~ 300 (350)
T cd08256 225 NPPEVDV---VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPV-TVDWSIIGDRKELDVLGSHL 300 (350)
T ss_pred cCCCcCH---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCC-ccChhHhhcccccEEEEecc
Confidence 8876666 5566677777789999999995 56788999999999999998544222 1222222 355667776653
Q ss_pred ccccccCchhHHHHHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 278 GSYKIHRPHVLEDSLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.. ..++++++++.+|.+++. +.+.|+++++++|++.+.+++..+|+|+
T Consensus 301 ~~----------~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 301 GP----------YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred Cc----------hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 32 357788999999999863 6889999999999999999888888874
No 79
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=7.7e-39 Score=264.37 Aligned_cols=301 Identities=28% Similarity=0.353 Sum_probs=248.5
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCC--CCcccCCceeEEEEEeC--CCCCCCCCCCEEEEec
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPP--LPFVPGSDYSGTVDAVG--PNVSNFKVGDTVCGFA 99 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~--~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~ 99 (347)
.-+++.++|+ |+++|||+|+.|.+++| .++|.+...++ .|+-+|-..+|.++... |+...|++||.|.+..
T Consensus 27 F~lee~~vp~-p~~GqvLl~~~ylS~DP----ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~ 101 (340)
T COG2130 27 FRLEEVDVPE-PGEGQVLLRTLYLSLDP----YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS 101 (340)
T ss_pred ceeEeccCCC-CCcCceEEEEEEeccCH----HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc
Confidence 3345789999 69999999999999998 33444443333 47778877655443322 6688899999999975
Q ss_pred CCCcceeeEeeeCCCeeeCCCCCCH--HHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEE
Q 019049 100 ALGSFAQFIVADQSELFPVPKGCDL--LAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATI 177 (347)
Q Consensus 100 ~~g~~~~~~~~~~~~~~~~p~~~~~--~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V 177 (347)
+|++|.+++.+.+.|++++.-. .....+.++..|||.+|.+.+.+++|++|+|.+|+|++|..+.|+|+..|++|
T Consensus 102 ---GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rV 178 (340)
T COG2130 102 ---GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRV 178 (340)
T ss_pred ---cceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeE
Confidence 8999999999999999865322 23455789999999999999999999999999999999999999999999999
Q ss_pred EEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC
Q 019049 178 IAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 178 ~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
+.++.+++|+.++++ +|.+.++||+++++ .+.+.+. .+.++|+.||++|++.+...+..|+.++|++.||..+..
T Consensus 179 VGiaGg~eK~~~l~~~lGfD~~idyk~~d~---~~~L~~a-~P~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~Y 254 (340)
T COG2130 179 VGIAGGAEKCDFLTEELGFDAGIDYKAEDF---AQALKEA-CPKGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQY 254 (340)
T ss_pred EEecCCHHHHHHHHHhcCCceeeecCcccH---HHHHHHH-CCCCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhc
Confidence 999999999999987 99999999999987 4444444 468999999999999999999999999999999976542
Q ss_pred C----CC--cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcc
Q 019049 257 I----PV--IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVI 330 (347)
Q Consensus 257 ~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~ 330 (347)
. +. .....++.+.+++.|+........++ .+.++++..|+++|+|+...+.+-.||++++||..+.+++..
T Consensus 255 N~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~---~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~ 331 (340)
T COG2130 255 NAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRF---PEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNF 331 (340)
T ss_pred CCCCCCCCcchhhHHHhhhheeEEEEechhhhhhh---HHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCcc
Confidence 1 11 12234778899999998744332222 478899999999999998888788999999999999999999
Q ss_pred eeEEEEeCC
Q 019049 331 GKVMIAFDD 339 (347)
Q Consensus 331 gk~vv~~~~ 339 (347)
||+|+++.+
T Consensus 332 GK~vvKv~~ 340 (340)
T COG2130 332 GKLVVKVAD 340 (340)
T ss_pred ceEEEEecC
Confidence 999999853
No 80
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.9e-38 Score=285.97 Aligned_cols=309 Identities=25% Similarity=0.339 Sum_probs=257.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.. .+++.+.|+++.++||+|++.++++|++|+..+.|.++. ..+|.++|||++|+|+
T Consensus 1 m~a~~~~~~~~~------------~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~ 67 (345)
T cd08286 1 MKALVYHGPGKI------------SWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT-VTPGRILGHEGVGVVE 67 (345)
T ss_pred CceEEEecCCce------------eEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC-CCCCceecccceEEEE
Confidence 999999887753 346788888337899999999999999999999887643 2447899999999999
Q ss_pred EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHccC
Q 019049 81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAAAL 130 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l 130 (347)
++|++++++++||+|+.+. .+|+|++|+.++.+ .++++|++++..+++.+
T Consensus 68 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l 147 (345)
T cd08286 68 EVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVML 147 (345)
T ss_pred EeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhc
Confidence 9999999999999998642 13889999999987 89999999999999999
Q ss_pred cchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhh
Q 019049 131 PVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPS 209 (347)
Q Consensus 131 ~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 209 (347)
+..+++||+++...+++.++++|+|.|+ |++|.+++|+++.+| .+|++++.++++.+.++++|++.++++...++
T Consensus 148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--- 223 (345)
T cd08286 148 SDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDA--- 223 (345)
T ss_pred cchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccH---
Confidence 9999999998777889999999999876 999999999999999 69999988888999999999999998876665
Q ss_pred HHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhH
Q 019049 210 VKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVL 288 (347)
Q Consensus 210 ~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (347)
...+.+.+.+.++|+++||+|. ..+..+++.++++|+++.+|..... ..++...++.+++++.+....
T Consensus 224 ~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---------- 292 (345)
T cd08286 224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP-VDLHLEKLWIKNITITTGLVD---------- 292 (345)
T ss_pred HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC-CCcCHHHHhhcCcEEEeecCc----------
Confidence 5566667777789999999986 4567888999999999999865432 223444457788888774321
Q ss_pred HHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCC--cceeEEEEe
Q 019049 289 EDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRK--VIGKVMIAF 337 (347)
Q Consensus 289 ~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~--~~gk~vv~~ 337 (347)
.+.++++.+++.++.+++ .+.++|++++++++++.+.... ...|+||+|
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 145788889999999875 3678999999999999998764 334888864
No 81
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2e-38 Score=285.90 Aligned_cols=306 Identities=29% Similarity=0.389 Sum_probs=254.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++. ..+++++.|++++++||+|++.++++|+.|+....|.++ ..+|.++|+|++|+|+
T Consensus 1 ~~a~~~~~~~~------------~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~g~e~~G~V~ 66 (344)
T cd08284 1 MKAVVFKGPGD------------VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP--STPGFVLGHEFVGEVV 66 (344)
T ss_pred CeeEEEecCCC------------ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC--CCCCcccccceEEEEE
Confidence 89999987542 455788999943499999999999999999998887664 2447789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-------------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHH
Q 019049 81 AVGPNVSNFKVGDTVCGFA-------------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAA 127 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~a 127 (347)
++|++++++++||+|+++. .+|+|++|+.++.+ .++++|++++++++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a 146 (344)
T cd08284 67 EVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA 146 (344)
T ss_pred eeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence 9999999999999998753 14889999999874 99999999999999
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
+++++.++|||+++. .+++.++++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|+. .++.+..++
T Consensus 147 ~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~ 223 (344)
T cd08284 147 LLLGDILPTGYFGAK-RAQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEP 223 (344)
T ss_pred hhhcCchHHHHhhhH-hcCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCH
Confidence 999999999999985 588999999999975 9999999999999997 899998888899988999975 466665555
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 285 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
...+.+.+.+.++|++|||+|+ .....++++++++|+++.+|..............+.+++++.+...
T Consensus 224 ---~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 292 (344)
T cd08284 224 ---VERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC-------- 292 (344)
T ss_pred ---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC--------
Confidence 5566667777889999999996 5678899999999999999866533222333455677787765421
Q ss_pred hhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 286 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 286 ~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
...+.++++++++.++.+++ .+.+.+++++++++++.+.+++. +|+|+.
T Consensus 293 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 293 -PVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred -CcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 12477889999999999985 37788999999999999998877 899875
No 82
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.7e-38 Score=281.78 Aligned_cols=318 Identities=32% Similarity=0.439 Sum_probs=268.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..++.++. +.+++.+.|. +.+++|+|++.++++|++|+....+........|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~ 70 (326)
T cd08272 1 MKALVLESFGGPEV---------FELREVPRPQ-PGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVE 70 (326)
T ss_pred CeEEEEccCCCchh---------eEEeecCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEE
Confidence 99999999887743 3345677777 4899999999999999999998877654333457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
.+|+++.++++||+|+++. ..|++++|+.++.++++++|+++++.+++.++..+.+||+++....++.++++++|
T Consensus 71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli 150 (326)
T cd08272 71 AVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLI 150 (326)
T ss_pred EeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999999999885 25899999999999999999999999999999999999999888899999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 235 (347)
+|++|.+|++++++++..|++|++++++ ++.+.++++|++.+++.... + ...+...+.+.++|.++||+++....
T Consensus 151 ~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~---~~~~~~~~~~~~~d~v~~~~~~~~~~ 225 (326)
T cd08272 151 HGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-V---VEYVAEHTGGRGFDVVFDTVGGETLD 225 (326)
T ss_pred EcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-H---HHHHHHhcCCCCCcEEEECCChHHHH
Confidence 9998999999999999999999999988 88899999999888877655 5 55566667777899999999987788
Q ss_pred HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc--ccccCchhHHHHHHHHHHHHHcCceeeeec-eee
Q 019049 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS--YKIHRPHVLEDSLRELLLWAAKGLITIHIS-HTY 312 (347)
Q Consensus 236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~-~~~ 312 (347)
.++++++++|+++.++... . .+......+++++.+..... .....+....+.+..+++++.++.+++.++ +.|
T Consensus 226 ~~~~~l~~~g~~v~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 301 (326)
T cd08272 226 ASFEAVALYGRVVSILGGA-T---HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTF 301 (326)
T ss_pred HHHHHhccCCEEEEEecCC-c---cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccccccee
Confidence 8999999999999987653 1 12222336788888776543 333455556678899999999999987655 899
Q ss_pred ChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 313 SPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 313 ~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++++++++.+.++...+|+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 302 PLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cHHHHHHHHHHHHcCCcccEEEEEC
Confidence 9999999999999888889999864
No 83
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2e-38 Score=285.51 Aligned_cols=309 Identities=25% Similarity=0.338 Sum_probs=250.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC----------CCCCCCcc
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ----------EKPPLPFV 70 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~----------~~~~~p~~ 70 (347)
|||+++.++ + ..+++++.|+ ++++||+|++.++++|+.|+....|... ....+|.+
T Consensus 1 m~a~~~~~~--~-----------~~~~~~~~p~-~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~ 66 (341)
T cd08262 1 MRAAVFRDG--P-----------LVVRDVPDPE-PGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIV 66 (341)
T ss_pred CceEEEeCC--c-----------eEEEecCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcc
Confidence 899999765 3 4456889999 5999999999999999999998887321 12235778
Q ss_pred cCCceeEEEEEeCCCCCC-CCCCCEEEEec-----------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 71 PGSDYSGTVDAVGPNVSN-FKVGDTVCGFA-----------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 71 ~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
+|+|++|+|+++|+++++ +++||+|+++. ..|+|++|+.++.+.++++|+++++++++ ++.
T Consensus 67 ~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~ 145 (341)
T cd08262 67 LGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTE 145 (341)
T ss_pred cccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhh
Confidence 999999999999999987 99999999872 35899999999999999999999999887 667
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVK 211 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 211 (347)
++++||+++ ..++++++++|+|+|+ |++|.+++|+++.+|++ +++++.++++.+.++++|++++++++..+..+...
T Consensus 146 ~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 223 (341)
T cd08262 146 PLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA 223 (341)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH
Confidence 889999985 7899999999999976 99999999999999996 77777788899999999999899877654322222
Q ss_pred HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049 212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290 (347)
Q Consensus 212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
.+.+.+.+.++|+++|++|+ ..+..++++++++|+++.+|....... ........++.++.++...+ .+
T Consensus 224 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~ 293 (341)
T cd08262 224 AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDN-IEPALAIRKELTLQFSLGYT---------PE 293 (341)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCc-cCHHHHhhcceEEEEEeccc---------HH
Confidence 34455666789999999997 467888999999999999986643221 12222245666666543222 35
Q ss_pred HHHHHHHHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 291 SLRELLLWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.++++++++.+|.+++. +.+.+++++++++++.+.+++..||+|++
T Consensus 294 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 294 EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 77889999999999853 57899999999999999999999999874
No 84
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.1e-38 Score=284.48 Aligned_cols=305 Identities=26% Similarity=0.386 Sum_probs=254.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++++++.. .+++.+.|.+ .+++|+|++.++++|+.|+..+.|.+. +...|.++|+|++|+|+
T Consensus 1 ~~~~~~~~~~~~------------~~~~~~~~~l-~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~ 66 (343)
T cd08235 1 MKAAVLHGPNDV------------RLEEVPVPEP-GPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIV 66 (343)
T ss_pred CeEEEEecCCce------------EEEEccCCCC-CCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEE
Confidence 899999987743 3457888885 899999999999999999999887653 23457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCC-----eeeCCCCCCHHHHc
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSE-----LFPVPKGCDLLAAA 128 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa 128 (347)
++|++++++++||+|+++. ..|+|++|+.++.+. ++++|+++++.+++
T Consensus 67 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa 146 (343)
T cd08235 67 EVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA 146 (343)
T ss_pred eeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH
Confidence 9999999999999999862 358999999999998 99999999999998
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
.+ .++.+||+++. ..++.+|++|+|+|+ |++|.+++|+|+..|++ |+++++++++.+.++++|.++++++++.++
T Consensus 147 ~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~- 222 (343)
T cd08235 147 LV-EPLACCINAQR-KAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDL- 222 (343)
T ss_pred hh-hHHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCH-
Confidence 76 88999999985 458999999999975 99999999999999998 999999999999998999999998887776
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEeccccccCc
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRP 285 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
.+.+.+.+.+.++|+++||++.. .+..++++++++|+++.++..... ...........++..+.++....
T Consensus 223 --~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------ 294 (343)
T cd08235 223 --VEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS------ 294 (343)
T ss_pred --HHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC------
Confidence 55666677777899999999964 778899999999999998865432 12223344556777776654322
Q ss_pred hhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 286 HVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 286 ~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.+.++++++++.++.+++ .+...|+++++.++++.+.+++ .||+|+
T Consensus 295 ---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi 342 (343)
T cd08235 295 ---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVI 342 (343)
T ss_pred ---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence 356788899999999873 4667899999999999999998 889986
No 85
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=4.3e-38 Score=282.82 Aligned_cols=320 Identities=27% Similarity=0.325 Sum_probs=262.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||++++++++++. ...+..++++.|+ +.++||+|++.++++|++|++...+..+ ...+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~-~~~~~~~~g~e~~G~v~ 72 (336)
T cd08252 1 MKAIGFTQPLPITD------PDSLIDIELPKPV-PGGRDLLVRVEAVSVNPVDTKVRAGGAP-VPGQPKILGWDASGVVE 72 (336)
T ss_pred CceEEecCCCCCCc------ccceeEccCCCCC-CCCCEEEEEEEEEEcCHHHHHHHcCCCC-CCCCCcccccceEEEEE
Confidence 89999999998741 0113445788888 4899999999999999999998877654 23457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC-----CCE
Q 019049 81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS-----GQV 152 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~ 152 (347)
++|+++.++++||+|+... .+|+|++|+.++.++++++|+++++++++.++..+.+||+++...+.+.+ +++
T Consensus 73 ~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 152 (336)
T cd08252 73 AVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKT 152 (336)
T ss_pred EcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCE
Confidence 9999999999999999864 46999999999999999999999999999999999999999878888887 999
Q ss_pred EEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
|+|+|++|++|++++|+++.+| ++|++++.++++.++++++|++++++... .+ ...+. ...+.++|+++||+|+
T Consensus 153 vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~---~~~i~-~~~~~~~d~vl~~~~~ 227 (336)
T cd08252 153 LLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DL---AEQLE-ALGIEPVDYIFCLTDT 227 (336)
T ss_pred EEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cH---HHHHH-hhCCCCCCEEEEccCc
Confidence 9999988999999999999999 89999999999999999999999888764 33 33333 3344689999999996
Q ss_pred -cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecccc-ccCc--hhHHHHHHHHHHHHHcCceeee
Q 019049 232 -KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYK-IHRP--HVLEDSLRELLLWAAKGLITIH 307 (347)
Q Consensus 232 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~g~l~~~ 307 (347)
..+..++++++++|+++.+|.... ..+...+..++.++.+..+.... ...+ ....+.++++++++.+|.+++.
T Consensus 228 ~~~~~~~~~~l~~~g~~v~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (336)
T cd08252 228 DQHWDAMAELIAPQGHICLIVDPQE---PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT 304 (336)
T ss_pred HHHHHHHHHHhcCCCEEEEecCCCC---cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence 678899999999999999985531 22223344678888876654311 1222 2445778899999999999864
Q ss_pred ec---eeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 308 IS---HTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 308 ~~---~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+. ..+++++++++++.+.++...||++++
T Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 305 LTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 32 357999999999999999988998864
No 86
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.2e-38 Score=281.56 Aligned_cols=309 Identities=28% Similarity=0.404 Sum_probs=254.1
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++...+.++. ..+++.+.|. ++++||+|++.++++|++|+....+..+. ...|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~ 69 (320)
T cd08243 1 MKAIVIEQPGGPEV---------LKLREIPIPE-PKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVE 69 (320)
T ss_pred CeEEEEcCCCCccc---------eEEeecCCCC-CCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEE
Confidence 89999988776532 2234677777 48999999999999999999988876532 3457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049 81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 154 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl 154 (347)
++|+ .++++||+|+++. .+|+|++|+.++...++++|+++++++++.++.++.+||+++....++.+|++|+
T Consensus 70 ~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 147 (320)
T cd08243 70 EAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLL 147 (320)
T ss_pred EecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEE
Confidence 9995 5799999999875 2489999999999999999999999999999999999999998888899999999
Q ss_pred EecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049 155 VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234 (347)
Q Consensus 155 I~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 234 (347)
|+|++|++|.+++|+|+..|++|++++.++++.+.++++|++++++. ..++ .+.+.+. +.++|+++||+|+..+
T Consensus 148 V~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~---~~~i~~~--~~~~d~vl~~~~~~~~ 221 (320)
T cd08243 148 IRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAI---AEQLRAA--PGGFDKVLELVGTATL 221 (320)
T ss_pred EEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccH---HHHHHHh--CCCceEEEECCChHHH
Confidence 99999999999999999999999999999999999999999888754 3344 3444444 5689999999998888
Q ss_pred HHHHhccccCCEEEEEeecCCCCCC--cchhHh--hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeece
Q 019049 235 KESLKLLNWGAQILVIGFASGEIPV--IPANIA--LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISH 310 (347)
Q Consensus 235 ~~~~~~l~~~G~~v~~g~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~ 310 (347)
..++++++++|+++.+|........ ...... +.++.++.++...... ...++.+++++.++.+++.+.+
T Consensus 222 ~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 294 (320)
T cd08243 222 KDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-------QTPLQELFDFVAAGHLDIPPSK 294 (320)
T ss_pred HHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-------HHHHHHHHHHHHCCceeccccc
Confidence 8999999999999999865332111 111111 2566676665533211 3567888999999999877788
Q ss_pred eeChhhHHHHHHHHHcCCcceeEEE
Q 019049 311 TYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 311 ~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.++++++++|++.+.++...||+|+
T Consensus 295 ~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 295 VFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred EEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 9999999999999999888888875
No 87
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=5e-38 Score=280.77 Aligned_cols=323 Identities=30% Similarity=0.482 Sum_probs=272.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+.+..++.+.. +.+++.+.|.+ ++++++|++.++++|+.|+....+.++.+..+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~l-~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~ 70 (325)
T TIGR02824 1 MKAIEITEPGGPEV---------LVLVEVPLPVP-KAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVV 70 (325)
T ss_pred CceEEEccCCCccc---------ceEEeCCCCCC-CCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEE
Confidence 89999988776643 33345566664 899999999999999999998877665444567899999999999
Q ss_pred EeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCc
Q 019049 81 AVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAG 160 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g 160 (347)
.+|+++.++++||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.++|+++....++.++++++|+|++|
T Consensus 71 ~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~ 150 (325)
T TIGR02824 71 AVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGAS 150 (325)
T ss_pred EeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcc
Confidence 99999999999999999876699999999999999999999999999999999999999988889999999999999999
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 240 (347)
++|.+++++++..|++|+++++++++.+.++++|++.+++....++ ...+...+.+.++|.+++|+|+..+..++++
T Consensus 151 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 227 (325)
T TIGR02824 151 GIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDF---VEVVKAETGGKGVDVILDIVGGSYLNRNIKA 227 (325)
T ss_pred hHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhH---HHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence 9999999999999999999999999898888899888877665555 5556666666789999999998777889999
Q ss_pred cccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEecc-ccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049 241 LNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGS-YKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319 (347)
Q Consensus 241 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~ 319 (347)
++++|+++.++.........+...++.++.++.++.... .....+....+.+.++++++.++.+++.+.+.++++++++
T Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 307 (325)
T TIGR02824 228 LALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQ 307 (325)
T ss_pred hccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHH
Confidence 999999999986542222334444558999999988655 2334454556777889999999999877888999999999
Q ss_pred HHHHHHcCCcceeEEEE
Q 019049 320 AFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 320 a~~~~~~~~~~gk~vv~ 336 (347)
+++.+.++...||++++
T Consensus 308 ~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 308 AHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHhCCCcceEEEe
Confidence 99999988888899875
No 88
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.9e-38 Score=284.14 Aligned_cols=310 Identities=30% Similarity=0.440 Sum_probs=263.7
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++.+++++. ...++.+.|.+ ++++|+|++.++++|+.|+....|.++.+..+|.++|+|++|+|+
T Consensus 1 ~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~ 69 (338)
T cd08254 1 MKAWRFHKGSKGL----------LVLEEVPVPEP-GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVV 69 (338)
T ss_pred CeeEEEecCCCCc----------eEEeccCCCCC-CCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEE
Confidence 9999999998761 23457888884 899999999999999999999988776445567889999999999
Q ss_pred EeCCCCCCCCCCCEEEE------------------ec---------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCG------------------FA---------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++++++||+|+. ++ .+|+|++|+.++.+.++++|+++++.+++.++.+
T Consensus 70 ~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~ 149 (338)
T cd08254 70 EVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDA 149 (338)
T ss_pred EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcch
Confidence 99999999999999986 21 2489999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++.....+.++++|||.|+ |.+|++++++|+..|++|++++.++++.+.++++|++++++..+... ...+
T Consensus 150 ~~ta~~~l~~~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~---~~~~ 225 (338)
T cd08254 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSP---KDKK 225 (338)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCH---HHHH
Confidence 9999999988888999999999865 99999999999999999999999999999999999988888766554 2333
Q ss_pred HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 292 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
..+.+.++|+++||+|. ..+..++++++++|+++.++..... ..++...++.++.++.+++... .+.+
T Consensus 226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 294 (338)
T cd08254 226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK-LTVDLSDLIARELRIIGSFGGT---------PEDL 294 (338)
T ss_pred -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC-CccCHHHHhhCccEEEEeccCC---------HHHH
Confidence 55667789999999985 5778899999999999999765432 2234455677888888765332 4678
Q ss_pred HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
+.+++++.++.+++. .+.+++++++++++.+.+++..||+|+++
T Consensus 295 ~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 295 PEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 889999999999876 67899999999999999999999999874
No 89
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.1e-38 Score=284.64 Aligned_cols=301 Identities=25% Similarity=0.335 Sum_probs=254.2
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
|+|+.+..+.- +..++++.|. ++++||+||+.++++|++|++.+.|... ...+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlirv~a~~i~~~d~~~~~g~~~-~~~~p~~~g~e~~G~V~~ 67 (337)
T cd05283 1 KGYAARDASGK-----------LEPFTFERRP-LGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVVA 67 (337)
T ss_pred CceEEecCCCC-----------ceEEeccCCC-CCCCeEEEEEEEecccchHHHHhcCCcC-CCCCCcccCcceeeEEEE
Confidence 56777777743 5567899999 5999999999999999999999988763 235688999999999999
Q ss_pred eCCCCCCCCCCCEEEEe-----------------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHH
Q 019049 82 VGPNVSNFKVGDTVCGF-----------------------------------AALGSFAQFIVADQSELFPVPKGCDLLA 126 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 126 (347)
+|+++++|++||+|+.. ...|+|++|+.++.+.++++|+++++++
T Consensus 68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 147 (337)
T cd05283 68 VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAA 147 (337)
T ss_pred ECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHH
Confidence 99999999999999731 2358999999999999999999999999
Q ss_pred HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 127 AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 127 aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
++.+++.+.+||+++.. ..+.++++++|.|+ |++|++++++++..|++|+++++++++.++++++|++.+++....+.
T Consensus 148 aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 225 (337)
T cd05283 148 AAPLLCAGITVYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEA 225 (337)
T ss_pred hhhhhhHHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhh
Confidence 99999999999999854 56899999999775 99999999999999999999999999999999999998887665432
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP 285 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
.. . .+.++|+++||+|... ...++++++++|+++.+|...... ..+...++.++.++.++....
T Consensus 226 ---~~----~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~------ 290 (337)
T cd05283 226 ---MK----K-AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGG------ 290 (337)
T ss_pred ---hh----h-ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccC------
Confidence 11 1 2467999999999864 788999999999999998765432 344455667899999877653
Q ss_pred hhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 286 HVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 286 ~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.+.++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus 291 ---~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 ---RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ---HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 36788899999999998654 689999999999999999999998874
No 90
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.2e-38 Score=286.13 Aligned_cols=307 Identities=25% Similarity=0.420 Sum_probs=253.4
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++.+++++ ..+++++.|. ++++||+|++.++++|++|++.+.+.+. ..+|.++|||++|+|++
T Consensus 2 ~a~~~~~~~~~-----------~~~~~~~~p~-~~~~~vlv~v~~~~i~~~d~~~~~g~~~--~~~~~i~g~e~~G~V~~ 67 (365)
T cd05279 2 KAAVLWEKGKP-----------LSIEEIEVAP-PKAGEVRIKVVATGVCHTDLHVIDGKLP--TPLPVILGHEGAGIVES 67 (365)
T ss_pred ceeEEecCCCC-----------cEEEEeecCC-CCCCeEEEEEEEeeecchhHHHhcCCCC--CCCCcccccceeEEEEE
Confidence 57777766654 4456889999 4999999999999999999999888654 34578999999999999
Q ss_pred eCCCCCCCCCCCEEEEec------------------------------------------------CCCcceeeEeeeCC
Q 019049 82 VGPNVSNFKVGDTVCGFA------------------------------------------------ALGSFAQFIVADQS 113 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~ 113 (347)
+|++++.+++||+|+.+. ..|+|++|+.++++
T Consensus 68 vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 147 (365)
T cd05279 68 IGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEI 147 (365)
T ss_pred eCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCC
Confidence 999999999999998752 13689999999999
Q ss_pred CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHh
Q 019049 114 ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKS 192 (347)
Q Consensus 114 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~ 192 (347)
.++++|+++++++++.+++++.+||+++...+++.+|++|||+|+ |++|++++++|+.+|++ |+++++++++.+.+++
T Consensus 148 ~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~ 226 (365)
T cd05279 148 SLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ 226 (365)
T ss_pred ceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 999999999999999999999999999888899999999999975 99999999999999995 7788889999999999
Q ss_pred cCCcEEEeCCCC--CchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccc-cCCEEEEEeecC-CCCCCcchhHhhh
Q 019049 193 LGVDHVVDLSNE--SVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLN-WGAQILVIGFAS-GEIPVIPANIALV 267 (347)
Q Consensus 193 ~g~~~v~~~~~~--~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~ 267 (347)
+|++++++..+. ++ .+.+.+.++ .++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .
T Consensus 227 ~g~~~~v~~~~~~~~~---~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~ 301 (365)
T cd05279 227 LGATECINPRDQDKPI---VEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-L 301 (365)
T ss_pred hCCCeecccccccchH---HHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-h
Confidence 999999887665 44 445556564 689999999986 67788999999 999999998653 22223444444 6
Q ss_pred cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
++.++.|++...+.. .+.+.++++++.++.+++ .+.++++++++++||+.+.+++.. |+++
T Consensus 302 ~~~~l~g~~~~~~~~------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 302 TGRTIKGTVFGGWKS------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred cCCeEEEEeccCCch------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 677787776544321 467888999999999985 478899999999999999877654 5554
No 91
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=8.6e-38 Score=281.31 Aligned_cols=315 Identities=35% Similarity=0.503 Sum_probs=265.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++...+.+.. ..+++.+.|. +.+++|+|++.++++|++|++.+.|..+....+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~ 70 (342)
T cd08266 1 MKAVVIRGHGGPEV---------LEYGDLPEPE-PGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVE 70 (342)
T ss_pred CeEEEEecCCCccc---------eeEeecCCCC-CCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEE
Confidence 89999986665432 2234667777 4899999999999999999998887654334567889999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|+++.++++||+|+.+. ..|++++|+.++.+.++++|+++++++++.++..
T Consensus 71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~ 150 (342)
T cd08266 71 AVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLT 150 (342)
T ss_pred EeCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhH
Confidence 9999999999999998751 2588999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++....++.++++++|+|+++++|++++++++..|++|+++++++++.+.++..+.+.+++..+.+. ...+
T Consensus 151 ~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 227 (342)
T cd08266 151 FLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDF---VREV 227 (342)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHH---HHHH
Confidence 9999999888889999999999999889999999999999999999999999999888888887777665554 4555
Q ss_pred HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
...+.+.++|++++++|...+..++++++++|+++.++..............+.++.++.+..... ...+.
T Consensus 228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 298 (342)
T cd08266 228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGT---------KAELD 298 (342)
T ss_pred HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCC---------HHHHH
Confidence 566666789999999998888889999999999999986654322333334567788888876543 35788
Q ss_pred HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++++.++.+++.+.+.|++++++++++.+.++...+|+++++
T Consensus 299 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 299 EALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 89999999999877888999999999999999888889999863
No 92
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=3.6e-38 Score=283.72 Aligned_cols=309 Identities=24% Similarity=0.400 Sum_probs=250.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~ 78 (347)
||++++.++++. ..+.+.|.|. |+++||+||+.++++|++|+..+.+... ....+|.++|||++|+
T Consensus 1 ~~~~~~~~~~~~-----------~~~~~~~~p~-~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~ 68 (341)
T PRK05396 1 MKALVKLKAEPG-----------LWLTDVPVPE-PGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGE 68 (341)
T ss_pred CceEEEecCCCc-----------eEEEECCCCC-CCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEE
Confidence 899999887753 4456788899 5999999999999999999998765321 1224677899999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 131 (347)
|+++|++++++++||+|++.. .+|+|++|+.++.+.++++|+++++++++.+
T Consensus 69 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~- 147 (341)
T PRK05396 69 VVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF- 147 (341)
T ss_pred EEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-
Confidence 999999999999999998751 3589999999999999999999999988754
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210 (347)
Q Consensus 132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 210 (347)
..+.++++++.. ...+|++|+|.|+ |++|.+++|+|+.+|+ +|++++.++++.+.++++|+++++++++.++ .
T Consensus 148 ~~~~~~~~~~~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~---~ 221 (341)
T PRK05396 148 DPFGNAVHTALS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDL---R 221 (341)
T ss_pred hHHHHHHHHHHc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccH---H
Confidence 677777766532 3468999999875 9999999999999999 6888888889999999999999998887666 5
Q ss_pred HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+.+.+.+.+.++|++|||.|+ ..+..++++++++|+++.+|....... .+...+..++.++.++....+ .
T Consensus 222 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~ 292 (341)
T PRK05396 222 DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMA-IDWNKVIFKGLTIKGIYGREM--------F 292 (341)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCc-ccHHHHhhcceEEEEEEccCc--------c
Confidence 556666777889999999986 567889999999999999987653322 234566778888877642211 2
Q ss_pred HHHHHHHHHHHcC-ceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeC
Q 019049 290 DSLRELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFD 338 (347)
Q Consensus 290 ~~~~~~~~~l~~g-~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~ 338 (347)
+.+..+++++.++ .+.+.+.+.+++++++++++.+.++. .||+|++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 293 ETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred chHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 4456678888888 45455778999999999999998877 799999874
No 93
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-37 Score=277.34 Aligned_cols=322 Identities=33% Similarity=0.485 Sum_probs=272.0
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++...+.++. ..+++.+.|. +++++|+|++.++++|+.|+....+.......+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~ 70 (328)
T cd08268 1 MRAVRFHQFGGPEV---------LRIEELPVPA-PGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVE 70 (328)
T ss_pred CeEEEEeccCCcce---------eEEeecCCCC-CCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEE
Confidence 89999988776532 3335677777 5899999999999999999988777654434557789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec-----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 81 AVGPNVSNFKVGDTVCGFA-----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
.+|+++.++++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+++++.++|+++.....+.++++++|
T Consensus 71 ~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli 150 (328)
T cd08268 71 AVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLI 150 (328)
T ss_pred eeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999999999874 24899999999999999999999999999999999999999988889999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 235 (347)
+|++|++|++++++++..|+++++++.+.++.+.++++|++.+++...... ...+.+.+.+.++|++++++|+....
T Consensus 151 ~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~ 227 (328)
T cd08268 151 TAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDL---VAEVLRITGGKGVDVVFDPVGGPQFA 227 (328)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccH---HHHHHHHhCCCCceEEEECCchHhHH
Confidence 999999999999999999999999999999999998899888888776555 55566666667899999999998888
Q ss_pred HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS 315 (347)
Q Consensus 236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~ 315 (347)
.++++++++|+++.+|.........+....+.++.++.+....... .++....+.++.+.+++.++.+.+.....|+++
T Consensus 228 ~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (328)
T cd08268 228 KLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT-LDPEARRRAIAFILDGLASGALKPVVDRVFPFD 306 (328)
T ss_pred HHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccccc-CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHH
Confidence 8999999999999998665322223333357888888887765544 556666677888888888999887778889999
Q ss_pred hHHHHHHHHHcCCcceeEEEE
Q 019049 316 EANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 316 ~~~~a~~~~~~~~~~gk~vv~ 336 (347)
++.++++.+..+...+|++++
T Consensus 307 ~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 307 DIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHHHHHHcCCCCceEEEe
Confidence 999999999988888899875
No 94
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-37 Score=278.47 Aligned_cols=316 Identities=31% Similarity=0.473 Sum_probs=256.3
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++...+.++. +.+++.+.|. |.++||+|++.++++|++|+....|..+....+|.++|||++|+|+.
T Consensus 2 ~~~~~~~~~~~~~---------~~~~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~ 71 (331)
T cd08273 2 REVVVTRRGGPEV---------LKVVEADLPE-PAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDA 71 (331)
T ss_pred eeEEEccCCCccc---------EEEeccCCCC-CCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEE
Confidence 7888988887743 4455778898 58999999999999999999988877644345688999999999999
Q ss_pred eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049 82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~ 161 (347)
+|++++.+++||+|+++...|+|++|+.++.+.++++|+++++++++.+++++.+||+++...+++.++++|+|+|++|+
T Consensus 72 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ 151 (331)
T cd08273 72 LGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGG 151 (331)
T ss_pred eCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence 99999999999999998756899999999999999999999999999999999999999988789999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhcc
Q 019049 162 VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLL 241 (347)
Q Consensus 162 ~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l 241 (347)
+|++++++++..|++|++++. +++.+.++++|+.. ++....++ ... .. .++++|.+++|+|+.....+++++
T Consensus 152 ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~---~~~--~~-~~~~~d~vl~~~~~~~~~~~~~~l 223 (331)
T cd08273 152 VGQALLELALLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDW---LPA--ML-TPGGVDVVFDGVGGESYEESYAAL 223 (331)
T ss_pred HHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcch---hhh--hc-cCCCceEEEECCchHHHHHHHHHh
Confidence 999999999999999999998 88889998999754 45544444 222 22 335899999999987788999999
Q ss_pred ccCCEEEEEeecCCCCC-Ccch------------hHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeee
Q 019049 242 NWGAQILVIGFASGEIP-VIPA------------NIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHI 308 (347)
Q Consensus 242 ~~~G~~v~~g~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~ 308 (347)
+++|+++.+|....... .... .........+.+.........+|....+.++.+++++.++.+++.+
T Consensus 224 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~ 303 (331)
T cd08273 224 APGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKI 303 (331)
T ss_pred cCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCc
Confidence 99999999986543211 1110 0011122233332222233345656678899999999999999778
Q ss_pred ceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 309 SHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 309 ~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.+.+++++++++++.+.++...||+|+
T Consensus 304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 304 AKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 889999999999999999888888885
No 95
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.5e-37 Score=280.03 Aligned_cols=309 Identities=28% Similarity=0.430 Sum_probs=255.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++++++. ..+++.+.|.+ +++||+|++.++++|+.|+..+.+.+ +...|.++|+|++|+|+
T Consensus 1 ~~a~~~~~~~~------------l~~~~~~~~~l-~~~~v~v~v~~~~~n~~d~~~~~~~~--~~~~~~~~g~~~~G~V~ 65 (343)
T cd08236 1 MKALVLTGPGD------------LRYEDIPKPEP-GPGEVLVKVKACGICGSDIPRYLGTG--AYHPPLVLGHEFSGTVE 65 (343)
T ss_pred CeeEEEecCCc------------eeEEecCCCCC-CCCeEEEEEEEEEECccchHhhcCCC--CCCCCcccCcceEEEEE
Confidence 89999998764 33467888985 89999999999999999999887765 23457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|+++++|++||+|+++. ..|+|++|+.++.+.++++|+++++++++++ ..
T Consensus 66 ~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~ 144 (343)
T cd08236 66 EVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EP 144 (343)
T ss_pred EECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-ch
Confidence 9999999999999999861 3589999999999999999999999999887 67
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
+.+||+++. .+.+.++++|+|+|+ |.+|.+++|+|+.+|++ |+++++++++.+.++++|++.++++.... ..+
T Consensus 145 ~~ta~~~l~-~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~~ 218 (343)
T cd08236 145 AAVALHAVR-LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED----VEK 218 (343)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc----HHH
Confidence 899999985 788999999999975 99999999999999997 99999999999999999998888876544 334
Q ss_pred HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCC--CCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEI--PVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+...+.+.++|+++||.|. ..+..++++++++|+++.+|...... ...+...++.++.++.++...... + ...
T Consensus 219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 294 (343)
T cd08236 219 VRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA---P-FPG 294 (343)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc---c-cch
Confidence 5556666789999999986 46788999999999999998654321 222334456888899887753221 1 234
Q ss_pred HHHHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHc-CCcceeEEE
Q 019049 290 DSLRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIED-RKVIGKVMI 335 (347)
Q Consensus 290 ~~~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vv 335 (347)
+.++++++++.++.+. +.+.+.+++++++++++.+.+ +...||+|+
T Consensus 295 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 295 DEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 6778889999999986 346788999999999999998 667788774
No 96
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.4e-37 Score=275.58 Aligned_cols=315 Identities=25% Similarity=0.281 Sum_probs=254.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++..+|.++. ...++.|.|. |+++||+|++.++++|++|+....|.+.....+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~p~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~ 70 (324)
T cd08288 1 FKALVLEKDDGGTS---------AELRELDESD-LPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVV 70 (324)
T ss_pred CeeEEEeccCCCcc---------eEEEECCCCC-CCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEE
Confidence 99999999887643 5556899999 5999999999999999999998877654334467889999999999
Q ss_pred EeCCCCCCCCCCCEEEEec------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH--HhcCCC-CCC
Q 019049 81 AVGPNVSNFKVGDTVCGFA------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV--HRAQLS-SGQ 151 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~~~ 151 (347)
+ ++++++++||+|+++. ..|+|++|+.++.+.++++|+++++++++.++..+++++.++. ...+.. +++
T Consensus 71 ~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~ 148 (324)
T cd08288 71 E--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDG 148 (324)
T ss_pred e--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCC
Confidence 8 7778899999999863 2589999999999999999999999999999999999987763 124455 578
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|+|+|++|++|.+++|+|+.+|++|++++.++++.+.++++|+++++++.+.. ..+...+ ..++|.++|++++
T Consensus 149 ~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~-~~~~~~~~d~~~~ 222 (324)
T cd08288 149 PVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELS-----EPGRPLQ-KERWAGAVDTVGG 222 (324)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhh-----Hhhhhhc-cCcccEEEECCcH
Confidence 999999999999999999999999999999999999999999999998875421 2233333 3358999999998
Q ss_pred cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeecee
Q 019049 232 KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHT 311 (347)
Q Consensus 232 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~ 311 (347)
..+...+..++.+|+++.+|.........+...++.++.++.++....... ....+.+..+.+++.++.+.+ +.+.
T Consensus 223 ~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-i~~~ 298 (324)
T cd08288 223 HTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI---ERRRAAWARLARDLDPALLEA-LTRE 298 (324)
T ss_pred HHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc---hhhHHHHHHHHHHHhcCCccc-ccee
Confidence 667788888999999999987532111123333447888888876433211 223467777888888998875 4789
Q ss_pred eChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 312 YSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 312 ~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
+++++++++++.+.+++..||+++++
T Consensus 299 ~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 299 IPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 99999999999999999999999863
No 97
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=8.5e-38 Score=282.44 Aligned_cols=319 Identities=29% Similarity=0.385 Sum_probs=247.9
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCC-CCeEEEEEEEecCChhhHHHHhccCC--------------CCC
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQ--------------EKP 65 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~i~v~~~~i~~~d~~~~~g~~~--------------~~~ 65 (347)
|||++++++|++. +.+.+++.+.|. |. ++||+|++.++++|++|+....|... ...
T Consensus 1 ~~a~~~~~~~~~~--------~~~~~~~~~~p~-~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (350)
T cd08248 1 MKAWQIHSYGGID--------SLLLLENARIPV-IRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGI 71 (350)
T ss_pred CceEEecccCCCc--------ceeeecccCCCC-CCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCC
Confidence 9999999988763 124456888898 54 99999999999999999998877421 023
Q ss_pred CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHH
Q 019049 66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALV 142 (347)
Q Consensus 66 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 142 (347)
.+|.++|||++|+|+.+|+++.++++||+|+++. ..|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.
T Consensus 72 ~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~ 151 (350)
T cd08248 72 EFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALV 151 (350)
T ss_pred CCCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHH
Confidence 4588999999999999999999999999999875 2599999999999999999999999999999999999999987
Q ss_pred HhcCCCC----CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 143 HRAQLSS----GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 143 ~~~~~~~----~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
..+.+.+ |++|+|+|++|++|++++++++.+|++|+++.++ ++.+.++++|++.+++..+..+ .+.+. .
T Consensus 152 ~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~---~~~l~---~ 224 (350)
T cd08248 152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDF---EEELT---E 224 (350)
T ss_pred HhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhH---HHHHH---h
Confidence 7777754 9999999999999999999999999999988865 5777888999988888766544 33332 3
Q ss_pred CCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCC-C--c---ch-hHhhhcceEEEEEEeccc-cccCchhHHH
Q 019049 219 LKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIP-V--I---PA-NIALVKNWTVHGLYWGSY-KIHRPHVLED 290 (347)
Q Consensus 219 ~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~--~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (347)
..++|+++||+|......++++++++|+++.++....... . . +. ..+......+........ ....+....+
T Consensus 225 ~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (350)
T cd08248 225 RGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGS 304 (350)
T ss_pred cCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHH
Confidence 4679999999998888899999999999999975432110 0 0 00 000000000000000000 0000011247
Q ss_pred HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.+.++++++.+|.+++.+.+.|++++++++++.+.++...+|+++
T Consensus 305 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 305 ALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred HHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 788999999999998778899999999999999998888888876
No 98
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.1e-36 Score=271.86 Aligned_cols=321 Identities=48% Similarity=0.828 Sum_probs=270.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCC-CCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNS-STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTV 79 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V 79 (347)
|+|+++..++.+.. +. +.+.+ |. +. +++++|++.++++|++|+....|.+......|.++|||++|+|
T Consensus 1 ~~~~~~~~~~~~~~--------~~-~~~~~-~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v 69 (323)
T cd08241 1 MKAVVCKELGGPED--------LV-LEEVP-PE-PGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVV 69 (323)
T ss_pred CeEEEEecCCCcce--------eE-EecCC-CC-CCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEE
Confidence 89999987766532 23 34555 65 35 5999999999999999999887766443445778999999999
Q ss_pred EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCC
Q 019049 80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAA 159 (347)
Q Consensus 80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~ 159 (347)
+.+|+++.++++||+|+++...|++++|+.++.+.++++|++++..+++.++..+.+|++++.....+.++++|+|+|++
T Consensus 70 ~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 149 (323)
T cd08241 70 EAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAA 149 (323)
T ss_pred EEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999999999999987458999999999999999999999999998999999999998778899999999999999
Q ss_pred chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHh
Q 019049 160 GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLK 239 (347)
Q Consensus 160 g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 239 (347)
|++|++++++++..|++|++++.++++.+.++++|++.+++....++ .+.+...+.+.++|.+++|+|......+++
T Consensus 150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~ 226 (323)
T cd08241 150 GGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDL---RERVKALTGGRGVDVVYDPVGGDVFEASLR 226 (323)
T ss_pred chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccH---HHHHHHHcCCCCcEEEEECccHHHHHHHHH
Confidence 99999999999999999999999999999999999888887766555 556666777778999999999877788999
Q ss_pred ccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHH
Q 019049 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANL 319 (347)
Q Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~ 319 (347)
+++++|+++.++..............+.++.++.+.....+....+....+.++++++++.++.+++.+...|+++++.+
T Consensus 227 ~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (323)
T cd08241 227 SLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAE 306 (323)
T ss_pred hhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHH
Confidence 99999999999865433221223345678889988877666555665566788999999999999877888999999999
Q ss_pred HHHHHHcCCcceeEEE
Q 019049 320 AFSAIEDRKVIGKVMI 335 (347)
Q Consensus 320 a~~~~~~~~~~gk~vv 335 (347)
+++.+.++...+|+++
T Consensus 307 ~~~~~~~~~~~~~vvv 322 (323)
T cd08241 307 ALRALADRKATGKVVL 322 (323)
T ss_pred HHHHHHhCCCCCcEEe
Confidence 9999998888888876
No 99
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.7e-36 Score=271.00 Aligned_cols=318 Identities=31% Similarity=0.432 Sum_probs=261.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++..+. ..++++|.|.+ .+++|+|++.++++|++|+....+.... ..+|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~ 69 (325)
T cd08271 1 MKAWVLPKPGAALQ---------LTLEEIEIPGP-GAGEVLVKVHAAGLNPVDWKVIAWGPPA-WSYPHVPGVDGAGVVV 69 (325)
T ss_pred CeeEEEccCCCcce---------eEEeccCCCCC-CCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCcccccceEEEEE
Confidence 99999999984211 44568899994 9999999999999999999988776532 2346789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEec
Q 019049 81 AVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLG 157 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g 157 (347)
.+|+++.++++||+|+++. ..|+|++|+.++.+.++++|+++++.+++.+++.+.++++++...+++.+|++++|+|
T Consensus 70 ~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g 149 (325)
T cd08271 70 AVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITG 149 (325)
T ss_pred EeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 9999999999999999885 3589999999999999999999999999999999999999998888999999999999
Q ss_pred CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHH
Q 019049 158 AAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKES 237 (347)
Q Consensus 158 ~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~ 237 (347)
++|++|++++++++..|++|+++. ++++.+.+.++|++.+++.....+ ...+...+.+.++|.+++|+++.....+
T Consensus 150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~ 225 (325)
T cd08271 150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDV---CERIKEITGGRGVDAVLDTVGGETAAAL 225 (325)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccH---HHHHHHHcCCCCCcEEEECCCcHhHHHH
Confidence 989999999999999999999887 677888888899988888766655 4556666677789999999998777788
Q ss_pred HhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc----hhHHHHHHHHHHHHHcCceeeeeceeeC
Q 019049 238 LKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP----HVLEDSLRELLLWAAKGLITIHISHTYS 313 (347)
Q Consensus 238 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~g~l~~~~~~~~~ 313 (347)
+++++++|+++.++...... ....+.++..+....+.......+ ....+.+.++++++.++.+++...+.|+
T Consensus 226 ~~~l~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (325)
T cd08271 226 APTLAFNGHLVCIQGRPDAS----PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLP 301 (325)
T ss_pred HHhhccCCEEEEEcCCCCCc----chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEc
Confidence 99999999999986443221 112234445555444333222222 3445777889999999999877778899
Q ss_pred hhhHHHHHHHHHcCCcceeEEEEe
Q 019049 314 PSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 314 ~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++.++++.+.++...+|+++++
T Consensus 302 ~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 302 FEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHHHHHHHHHcCCccceEEEEC
Confidence 999999999999988889998763
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.8e-37 Score=276.39 Aligned_cols=306 Identities=25% Similarity=0.338 Sum_probs=249.6
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++.+++.. .+++.|.|.+++++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+
T Consensus 1 m~~~~~~~~~~~------------~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~ 66 (345)
T cd08287 1 MRATVIHGPGDI------------RVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVE 66 (345)
T ss_pred CceeEEecCCce------------eEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEE
Confidence 999999876643 346788888228999999999999999999988876542 357899999999999
Q ss_pred EeCCCCCCCCCCCEEEE-ec--------------------------CCCcceeeEeeeCC--CeeeCCCCCCHHHHc---
Q 019049 81 AVGPNVSNFKVGDTVCG-FA--------------------------ALGSFAQFIVADQS--ELFPVPKGCDLLAAA--- 128 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa--- 128 (347)
++|+++.++++||+|+. +. .+|++++|+.++.+ .++++|++++++.+.
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~ 146 (345)
T cd08287 67 EVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPS 146 (345)
T ss_pred EeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhh
Confidence 99999999999999986 22 12889999999974 999999999883221
Q ss_pred --cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCC
Q 019049 129 --ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNES 205 (347)
Q Consensus 129 --~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 205 (347)
.+...+.+||+++ ..+++.++++|+|.| +|++|++++|+|+..|++ ++++++++++.+.++++|+++++++....
T Consensus 147 ~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~ 224 (345)
T cd08287 147 LLALSDVMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE 224 (345)
T ss_pred hHhhhcHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc
Confidence 2236788999988 578899999999977 499999999999999995 88888888888989999999999988766
Q ss_pred chhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccC
Q 019049 206 VIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHR 284 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
+ .+.+.+.+++.++|+++||+|+ ..+..++++++++|+++.++..... ..++....+.+++++.+...
T Consensus 225 ~---~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~------- 293 (345)
T cd08287 225 A---VARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG-VELDVRELFFRNVGLAGGPA------- 293 (345)
T ss_pred H---HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC-CccCHHHHHhcceEEEEecC-------
Confidence 6 5667777777789999999986 5678899999999999998866532 22343355788888876322
Q ss_pred chhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 285 PHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 285 ~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
...+.++++++++.++.+++ .+.+.+++++++++++.+.++... |++|+
T Consensus 294 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 294 --PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred --CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 12478899999999999986 367889999999999998877655 88885
No 101
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.1e-36 Score=273.34 Aligned_cols=301 Identities=26% Similarity=0.410 Sum_probs=249.8
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++. ...++.+.|.+ .++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+
T Consensus 1 ~~a~~~~~~~~------------~~~~~~~~~~l-~~~~v~v~v~~~~l~~~d~~~~~g~~~~--~~p~~~g~~~~G~v~ 65 (334)
T cd08234 1 MKALVYEGPGE------------LEVEEVPVPEP-GPDEVLIKVAACGICGTDLHIYEGEFGA--APPLVPGHEFAGVVV 65 (334)
T ss_pred CeeEEecCCCc------------eEEEeccCCCC-CCCeEEEEEEEEeEchhhhHHhcCCCCC--CCCcccccceEEEEE
Confidence 89999988774 34568899995 9999999999999999999998887643 367889999999999
Q ss_pred EeCCCCCCCCCCCEEEE-------------------------e--cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCG-------------------------F--AALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~-------------------------~--~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++++++||+|+. + ...|+|++|+.++.+.++++|+++++.+++.+ ..
T Consensus 66 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~ 144 (334)
T cd08234 66 AVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EP 144 (334)
T ss_pred EeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hH
Confidence 99999999999999986 1 13589999999999999999999999998866 78
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
+.++++++ ..+++.++++|+|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|++.++++...+. ...
T Consensus 145 ~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~ 219 (334)
T cd08234 145 LSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDP---EAQ 219 (334)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCH---HHH
Confidence 88999998 7889999999999976 99999999999999997 899999999999999999988888766554 222
Q ss_pred HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEeccccccCchhHHH
Q 019049 213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWGSYKIHRPHVLED 290 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
+.+.+.++|+++||+|. .....++++++++|+++.+|..... ........++.++.++.++... .+
T Consensus 220 --~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 287 (334)
T cd08234 220 --KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----------PY 287 (334)
T ss_pred --HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----------HH
Confidence 44566789999999985 5678899999999999999865431 1122222334467777765421 35
Q ss_pred HHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 291 SLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.++++++++.++.+++ .+..++++++++++++.+.+ ...||+|+
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 6888999999999875 26788999999999999998 77888886
No 102
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=7.3e-37 Score=273.51 Aligned_cols=297 Identities=31% Similarity=0.461 Sum_probs=240.2
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||++++..++ ++. ..+++.+.|+ ++++||+|++.++++|++|+....+. .. ..+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~-~~~---------~~~~~~~~~~-~~~~ev~v~v~~~~i~~~d~~~~~~~-~~-~~~~~~~g~e~~G~v~ 67 (325)
T cd08264 1 MKALVFEKSG-IEN---------LKVEDVKDPK-PGPGEVLIRVKMAGVNPVDYNVINAV-KV-KPMPHIPGAEFAGVVE 67 (325)
T ss_pred CeeEEeccCC-CCc---------eEEEeccCCC-CCCCeEEEEEEEEEechHHHHHHhCC-CC-CCCCeecccceeEEEE
Confidence 8999998776 422 3335677777 59999999999999999999887642 21 2357789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 81 AVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
.+|++++++++||+|+.+. ..|+|++|+.++.+.++++|+++++++++.++.+
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~ 147 (325)
T cd08264 68 EVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVA 147 (325)
T ss_pred EECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhh
Confidence 9999999999999998651 3589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++.. ++++++++|+|+|++|++|++++++|+.+|++|+++++ .+.++++|++++++..+ . .+.+
T Consensus 148 ~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~---~~~l 217 (325)
T cd08264 148 ALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--V---EEKV 217 (325)
T ss_pred hHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--H---HHHH
Confidence 9999999854 89999999999999999999999999999999988873 36778899988887543 2 2334
Q ss_pred HHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR 293 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
.+.+ .++|++++++|+..+..++++++++|+++.+|.........+...+..++.++.++..+. ++.++
T Consensus 218 ~~~~--~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 286 (325)
T cd08264 218 KEIT--KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGT---------RKELL 286 (325)
T ss_pred HHHh--CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCC---------HHHHH
Confidence 4444 579999999998888899999999999999986532222344455666777777765432 46777
Q ss_pred HHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeE
Q 019049 294 ELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 333 (347)
Q Consensus 294 ~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 333 (347)
++++++.... ..+.+.|+++++++|++.+.++...+|+
T Consensus 287 ~~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 287 ELVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 8888885443 4566889999999999999988777665
No 103
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-36 Score=273.55 Aligned_cols=308 Identities=26% Similarity=0.392 Sum_probs=247.4
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC--CCCCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY--QEKPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~--~~~~~~p~~~G~e~~G~ 78 (347)
|||+++..+|.. ...++.+.|. |+++|++||+.++++|+.|+..+.+.. .....+|.++|+|++|+
T Consensus 1 ~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~ 68 (341)
T cd05281 1 MKAIVKTKAGPG-----------AELVEVPVPK-PGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGE 68 (341)
T ss_pred CcceEEecCCCc-----------eEEEeCCCCC-CCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEE
Confidence 999999987753 4456788899 599999999999999999998765432 11223567899999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec---------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCc
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA---------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALP 131 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 131 (347)
|+.+|++++.+++||+|+++. ..|+|++|++++.+.++++|++++++.+ +++
T Consensus 69 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~ 147 (341)
T cd05281 69 VVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQ 147 (341)
T ss_pred EEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhh
Confidence 999999999999999998851 2589999999999999999999998554 567
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSV 210 (347)
Q Consensus 132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 210 (347)
.++.++++++. ....++++|+|.|+ |++|++++|+++..|+ +|++++.+++|...++++|++++++....++ .
T Consensus 148 ~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~ 221 (341)
T cd05281 148 EPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDV---V 221 (341)
T ss_pred hHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccH---H
Confidence 88889998873 45678999999876 9999999999999999 7999988888899889999998888776665 4
Q ss_pred HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
.+.+.+.++++|++|||+|. .....++++++++|+++.+|.............+..++..+.++.... ..
T Consensus 222 -~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 292 (341)
T cd05281 222 -EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--------MF 292 (341)
T ss_pred -HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCC--------cc
Confidence 56667777889999999986 466888999999999999886543221111123556777777654211 12
Q ss_pred HHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 290 DSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 290 ~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
+.++++++++.++.+++ .+...+++++++++|+.+.+++ .||+|+++
T Consensus 293 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 293 ETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred hhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 45678889999999863 4677899999999999999988 89999763
No 104
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2e-36 Score=267.89 Aligned_cols=299 Identities=30% Similarity=0.520 Sum_probs=252.3
Q ss_pred CCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec--CCCcceeeE
Q 019049 31 IPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA--ALGSFAQFI 108 (347)
Q Consensus 31 ~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--~~g~~~~~~ 108 (347)
.|. +.+++|+|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|++++++++||+|+++. .+|+|++|+
T Consensus 2 ~p~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~ 80 (303)
T cd08251 2 VAP-PGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLV 80 (303)
T ss_pred CCC-CCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEE
Confidence 466 48899999999999999999998887654445688999999999999999999999999999875 358999999
Q ss_pred eeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 019049 109 VADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK 188 (347)
Q Consensus 109 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~ 188 (347)
.++.+.++++|+++++++++.++..+.+||+++ ....+.++++++|+++++++|.+++|+++.+|++|+++++++++.+
T Consensus 81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 159 (303)
T cd08251 81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE 159 (303)
T ss_pred EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 999999999999999999999999999999998 5789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhh
Q 019049 189 FLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALV 267 (347)
Q Consensus 189 ~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~ 267 (347)
.++++|++.+++....++ ...+...+.+.++|.++|++++.....++++++++|+++.++..... ....... .+.
T Consensus 160 ~~~~~g~~~~~~~~~~~~---~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~ 235 (303)
T cd08251 160 YLKQLGVPHVINYVEEDF---EEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLS-VLS 235 (303)
T ss_pred HHHHcCCCEEEeCCCccH---HHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChh-Hhh
Confidence 999999999998777666 55566677778899999999887788899999999999998765422 1112211 244
Q ss_pred cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 268 KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
++..+....+.......+....+.+.++.+++.+|.+++...+.|++++++++++.+.+++..||+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 236 NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 45555555544443445555567788899999999998778889999999999999999888888874
No 105
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.8e-36 Score=272.61 Aligned_cols=319 Identities=25% Similarity=0.360 Sum_probs=243.2
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
|++++.+++.+.. ....++|.|.+++++||+|++.++++|++|+....+........|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~---------~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 72 (352)
T cd08247 2 KALTFKNNTSPLT---------ITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVK 72 (352)
T ss_pred ceEEEecCCCcce---------eeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEE
Confidence 7899998887732 3333555564349999999999999999999887543221112377899999999999
Q ss_pred eCCCCC-CCCCCCEEEEec-----CCCcceeeEeeeCC----CeeeCCCCCCHHHHccCcchHHHHHHHHHHhc-CCCCC
Q 019049 82 VGPNVS-NFKVGDTVCGFA-----ALGSFAQFIVADQS----ELFPVPKGCDLLAAAALPVAFGTSHVALVHRA-QLSSG 150 (347)
Q Consensus 82 vG~~v~-~~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~~ 150 (347)
+|++++ +|++||+|+++. ..|+|++|++++.. .++++|+++++.+++.++..+.+||+++.... ++++|
T Consensus 73 vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g 152 (352)
T cd08247 73 VGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPD 152 (352)
T ss_pred eCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCC
Confidence 999998 899999999875 25899999999987 78999999999999999999999999997777 79999
Q ss_pred CEEEEecCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHhcCCcEEEeCCCCC---chhhHHHHHHHhc-CCcccE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVC-GA-TIIAVARGAEKIKFLKSLGVDHVVDLSNES---VIPSVKEFLKARK-LKGVDV 224 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~-g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~~~~~~~-~~~~d~ 224 (347)
++|+|+|+++.+|.+++|+|+.. +. +++++.. +++.+.++++|++.+++..+.+ + ..++.+.+. +.++|+
T Consensus 153 ~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~d~ 228 (352)
T cd08247 153 SKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKL---LKPVLENVKGQGKFDL 228 (352)
T ss_pred CeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccch---HHHHHHhhcCCCCceE
Confidence 99999999999999999999988 44 6777764 5556677889999998876654 4 445555554 678999
Q ss_pred EEeCCCc-cchHHHHhccc---cCCEEEEEeecC-CCCCCcc--------h-hHhhhcceEEEEEEeccccccCchhHHH
Q 019049 225 LYDPVGG-KLTKESLKLLN---WGAQILVIGFAS-GEIPVIP--------A-NIALVKNWTVHGLYWGSYKIHRPHVLED 290 (347)
Q Consensus 225 v~d~~g~-~~~~~~~~~l~---~~G~~v~~g~~~-~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
++||+|+ .....++++++ ++|+++.++... ......+ . ...+.++.++....+.... ..+. .+
T Consensus 229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 305 (352)
T cd08247 229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-LDPN--AD 305 (352)
T ss_pred EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-ecCC--HH
Confidence 9999998 56788899999 999999874221 1100000 0 0111222222221111111 1121 36
Q ss_pred HHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEE
Q 019049 291 SLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 291 ~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
.++.+++++.++.+++.+.+.+++++++++++.+.+++..||++++
T Consensus 306 ~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 306 WIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred HHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 6788999999999997788999999999999999999989999985
No 106
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-36 Score=271.28 Aligned_cols=300 Identities=28% Similarity=0.398 Sum_probs=245.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++.++. ..+.+ ++.+.|. ++++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+
T Consensus 1 ~~~~~~~~~~~~~~------~~~~~-~~~~~~~-~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~ 71 (329)
T cd08298 1 MKAMVLEKPGPIEE------NPLRL-TEVPVPE-PGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVE 71 (329)
T ss_pred CeEEEEecCCCCCC------CCceE-EeccCCC-CCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEE
Confidence 89999998885421 11233 4567777 59999999999999999999999887654 3457899999999999
Q ss_pred EeCCCCCCCCCCCEEEEe----------------------------cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCGF----------------------------AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
.+|+++.++++||+|+.. ..+|+|++|+.++.+.++++|+++++.+++.+++
T Consensus 72 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 151 (329)
T cd08298 72 AVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC 151 (329)
T ss_pred EECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence 999999999999999752 1258999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
++.+||+++ ..++++++++|+|+|+ |++|++++++++..|++|++++.++++++.++++|++.+++....
T Consensus 152 ~~~ta~~~~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-------- 221 (329)
T cd08298 152 AGIIGYRAL-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL-------- 221 (329)
T ss_pred hhHHHHHHH-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc--------
Confidence 999999998 8899999999999975 999999999999999999999999999999999999887765432
Q ss_pred HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049 213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
.+.++|+++++++. ..+..++++++++|+++.+|.........+... +.++..+.++.... .+.
T Consensus 222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~---------~~~ 286 (329)
T cd08298 222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLT---------RQD 286 (329)
T ss_pred -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCC---------HHH
Confidence 23578999998664 567889999999999998875332222222222 34455555543221 467
Q ss_pred HHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 292 LRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 292 ~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
++.+++++.++.+++. .+.|+++++++|++.+.+++..||+|+
T Consensus 287 ~~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 287 GEEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 8889999999998874 588999999999999999999998874
No 107
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.9e-36 Score=272.31 Aligned_cols=297 Identities=24% Similarity=0.362 Sum_probs=239.2
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE----
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG---- 97 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~---- 97 (347)
..+++.|.|. |+++||+|++.++++|++|+..+.+... ...++|.++|+|++|+|+++|++++++++||+|++
T Consensus 11 ~~l~~~~~p~-~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 89 (340)
T TIGR00692 11 AELTEVPVPE-PGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHI 89 (340)
T ss_pred cEEEECCCCC-CCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcC
Confidence 4456789999 5999999999999999999988755421 12235778999999999999999999999999987
Q ss_pred -----------------------ecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEE
Q 019049 98 -----------------------FAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLL 154 (347)
Q Consensus 98 -----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~Vl 154 (347)
+...|+|++|++++++.++++|++++++++ +++.++.++++++ ...+.+|++|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vl 166 (340)
T TIGR00692 90 VCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVL 166 (340)
T ss_pred CCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEE
Confidence 224589999999999999999999998655 4678899999886 45678999999
Q ss_pred EecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-c
Q 019049 155 VLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-K 232 (347)
Q Consensus 155 I~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~ 232 (347)
|.|+ |++|.+++|+++.+|++ |++++.++++.+.++++|++.++++...++ .+.+.+.+.+.++|+++||+|. .
T Consensus 167 I~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~l~~~~~~~~~d~vld~~g~~~ 242 (340)
T TIGR00692 167 VTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDV---VKEVADLTDGEGVDVFLEMSGAPK 242 (340)
T ss_pred EECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCH---HHHHHHhcCCCCCCEEEECCCCHH
Confidence 9775 99999999999999996 889988888889899999988888877666 5556666777789999999886 5
Q ss_pred chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeece
Q 019049 233 LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHISH 310 (347)
Q Consensus 233 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~~ 310 (347)
.+..++++++++|+++.+|.............+..++.++.++... ...+.+.++++++.++.++ +.+.+
T Consensus 243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~l~~~~~~~~ 314 (340)
T TIGR00692 243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--------HMFETWYTVSRLIQSGKLDLDPIITH 314 (340)
T ss_pred HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecC--------CchhhHHHHHHHHHcCCCChHHheee
Confidence 6788999999999999998653322211122455667777664411 1135678899999999997 34788
Q ss_pred eeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 311 TYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 311 ~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.++++++.++++.+.+++. ||+|+.+
T Consensus 315 ~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 315 KFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred eeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 9999999999999988874 9999864
No 108
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.3e-36 Score=274.61 Aligned_cols=296 Identities=24% Similarity=0.355 Sum_probs=240.2
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccC------CCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKY------QEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG 97 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 97 (347)
+.++++|.|+ ++++||+|++.++++|++|++.+.+.. +....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus 39 ~~~~~~~~p~-~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 39 LRVEDVPVPN-LKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred EEEEECCCCC-CCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 4456889999 499999999999999999999876321 112346789999999999999999999999999985
Q ss_pred ---------------------------ecCCCcceeeEeeeCCCeeeCCCC-------CCHHHHccCcchHHHHHHHHHH
Q 019049 98 ---------------------------FAALGSFAQFIVADQSELFPVPKG-------CDLLAAAALPVAFGTSHVALVH 143 (347)
Q Consensus 98 ---------------------------~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~l~~~~~~a~~~l~~ 143 (347)
+..+|+|++|+.++++.++++|++ ++.+ +++++.++++||+++..
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~ 196 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFI 196 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHh
Confidence 434699999999999999999986 3455 55677899999999866
Q ss_pred h-cCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCC---CchhhHHHHHHHhc
Q 019049 144 R-AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNE---SVIPSVKEFLKARK 218 (347)
Q Consensus 144 ~-~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~~ 218 (347)
. +++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|.+.++++|+++++++.+. ++ ...+.+.+.
T Consensus 197 ~~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~~v~~~~~ 272 (384)
T cd08265 197 RGGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLS---GEKVMEVTK 272 (384)
T ss_pred hcCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccH---HHHHHHhcC
Confidence 5 78999999999965 9999999999999999 79999999999999999999998887643 44 566777787
Q ss_pred CCcccEEEeCCCcc--chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHH
Q 019049 219 LKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELL 296 (347)
Q Consensus 219 ~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (347)
+.++|+++|++|+. .+..++++++++|+++.+|....... .....+..++.++.+...... ...+++++
T Consensus 273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~ 343 (384)
T cd08265 273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVP-LHLEVLQVRRAQIVGAQGHSG--------HGIFPSVI 343 (384)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCc-ccHHHHhhCceEEEEeeccCC--------cchHHHHH
Confidence 78899999999963 66889999999999999986543222 233445566777776643211 25678899
Q ss_pred HHHHcCceeee--eceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 297 LWAAKGLITIH--ISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 297 ~~l~~g~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
+++.++.+++. +.+.|+++++++|++.+.++ ..||+|+
T Consensus 344 ~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 344 KLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 99999999863 67889999999999997665 5678875
No 109
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.9e-36 Score=270.15 Aligned_cols=288 Identities=25% Similarity=0.324 Sum_probs=236.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
|||+++.+++. ..+++++.|++ +++||+|++.++++|++|++...|.++ .|.++|||++|+|+
T Consensus 1 ~~a~~~~~~~~------------~~~~~~~~p~~-~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv 63 (319)
T cd08242 1 MKALVLDGGLD------------LRVEDLPKPEP-PPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVE 63 (319)
T ss_pred CeeEEEeCCCc------------EEEEECCCCCC-CCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEE
Confidence 89999987653 45578999994 999999999999999999998887653 47789999999999
Q ss_pred EeCCCCCCCCCCCEEEE---------------------------e-cCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCG---------------------------F-AALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
++|++ +++||+|.. + ..+|+|++|++++.++++++|+++++++++.+ .
T Consensus 64 ~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~ 139 (319)
T cd08242 64 EGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-E 139 (319)
T ss_pred EeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-h
Confidence 99987 679999963 1 12589999999999999999999999988864 4
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
++.++|..+ ...+++++++|+|+|+ |++|.+++|+|+.+|++|++++.++++.+.++++|++.++++...
T Consensus 140 ~~~~~~~~~-~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------- 209 (319)
T cd08242 140 PLAAALEIL-EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE-------- 209 (319)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc--------
Confidence 556666655 7788999999999975 999999999999999999999999999999999999888765432
Q ss_pred HHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHH
Q 019049 213 FLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDS 291 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (347)
+.+.++|+++||+|. ..+..++++++++|+++..+..... ...+...+..++.++.+.... .
T Consensus 210 ----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~------------~ 272 (319)
T cd08242 210 ----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP-ASFDLTKAVVNEITLVGSRCG------------P 272 (319)
T ss_pred ----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-CccCHHHheecceEEEEEecc------------c
Confidence 345689999999987 5678889999999999986654322 233444556777887776432 2
Q ss_pred HHHHHHHHHcCcee--eeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 292 LRELLLWAAKGLIT--IHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 292 ~~~~~~~l~~g~l~--~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++++++++.++.++ +.+.+.|++++++++|+.+.++. .+|+|+++
T Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 273 FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 67788999999994 45789999999999999998766 47998853
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.9e-36 Score=268.64 Aligned_cols=315 Identities=25% Similarity=0.302 Sum_probs=251.6
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTV 79 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V 79 (347)
|||++...++.. +....+.+++.+.|. +.++||+|++.++++|+.|.....+.... +...+.++|+|++|+|
T Consensus 3 ~~~~~~~~~~~~-----~~~~~~~~~~~~~p~-~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 76 (329)
T cd05288 3 RQVVLAKRPEGP-----PPPDDFELVEVPLPE-LKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV 76 (329)
T ss_pred cEEEEeccCCCC-----CCccceeEEeccCCC-CCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEE
Confidence 677776554210 112235557889999 59999999999999999887655543211 1123567899999999
Q ss_pred EEeCCCCCCCCCCCEEEEecCCCcceeeEeeeC-CCeeeCCCCCC--HHHHcc-CcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 80 DAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQ-SELFPVPKGCD--LLAAAA-LPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 80 ~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
+++|++ ++++||+|+++ ++|++|+.++. +.++++|++++ +.+++. +++++.+||+++...+.+.++++|+|
T Consensus 77 ~~~G~~--~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI 151 (329)
T cd05288 77 VESRSP--DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV 151 (329)
T ss_pred EecCCC--CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence 999964 79999999986 48999999999 99999999985 555555 88999999999988788999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 234 (347)
+|++|++|++++|+++..|++|+++++++++.+.+++ +|++.++++.+.++ .+.+.+.+. .++|+++||+|+..+
T Consensus 152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~v~~~~~-~~~d~vi~~~g~~~~ 227 (329)
T cd05288 152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDL---AEALKEAAP-DGIDVYFDNVGGEIL 227 (329)
T ss_pred ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhH---HHHHHHhcc-CCceEEEEcchHHHH
Confidence 9998999999999999999999999999999999988 99999998877655 445555554 689999999999888
Q ss_pred HHHHhccccCCEEEEEeecCCCCCC-----cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeec
Q 019049 235 KESLKLLNWGAQILVIGFASGEIPV-----IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHIS 309 (347)
Q Consensus 235 ~~~~~~l~~~G~~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~ 309 (347)
..++++++++|+++.+|........ .+....+.++.++.++...... ....+.+.++++++.++.+++...
T Consensus 228 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~i~~~~~ 303 (329)
T cd05288 228 DAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA----DRFPEALAELAKWLAEGKLKYRED 303 (329)
T ss_pred HHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH----HHHHHHHHHHHHHHHCCCcccccc
Confidence 9999999999999999865432211 2234456788888887654322 233567888999999999987666
Q ss_pred eeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 310 HTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 310 ~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
..+++++++++++.+.+++..||+++
T Consensus 304 ~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 304 VVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccccHHHHHHHHHHHhcCCCccceeC
Confidence 77999999999999998888888874
No 111
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.7e-36 Score=269.58 Aligned_cols=297 Identities=25% Similarity=0.382 Sum_probs=240.7
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhcc-CCC-CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE----
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGK-YQE-KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG---- 97 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~---- 97 (347)
..+++.+.|. +.++||+|++.++++|+.|++.+.+. ... ...+|.++|+|++|+|+++|++++++++||+|++
T Consensus 10 ~~~~~~~~~~-l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 88 (343)
T cd05285 10 LRLEERPIPE-PGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGV 88 (343)
T ss_pred eeEEECCCCC-CCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEcccc
Confidence 4446788898 48999999999999999999876432 111 1135678999999999999999999999999986
Q ss_pred --------------------ec----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEE
Q 019049 98 --------------------FA----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVL 153 (347)
Q Consensus 98 --------------------~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~V 153 (347)
+. ..|+|++|++++++.++++|+++++++++.+ .++.+|++++ ..++++++++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~v 166 (343)
T cd05285 89 PCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTV 166 (343)
T ss_pred CCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence 21 2589999999999999999999999999877 6889999987 78999999999
Q ss_pred EEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049 154 LVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232 (347)
Q Consensus 154 lI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 232 (347)
+|.|+ |++|.+++|+|+.+|++ |+++++++++.+.++++|++.+++.+..++....+.+...+.+.++|+++||.|..
T Consensus 167 lI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~ 245 (343)
T cd05285 167 LVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAE 245 (343)
T ss_pred EEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCH
Confidence 99876 99999999999999997 99999999999999999999999877655311134455667777899999999985
Q ss_pred -chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--eeec
Q 019049 233 -LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IHIS 309 (347)
Q Consensus 233 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~~~ 309 (347)
.+..++++++++|+++.+|..... ...+...+..+++.+.++... .+.++++++++.++.++ +.+.
T Consensus 246 ~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 246 SCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRY----------ANTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred HHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccC----------hHHHHHHHHHHHcCCCCchHhEE
Confidence 778899999999999999865432 223333456677777665422 15678889999999875 3467
Q ss_pred eeeChhhHHHHHHHHHcCC-cceeEEE
Q 019049 310 HTYSPSEANLAFSAIEDRK-VIGKVMI 335 (347)
Q Consensus 310 ~~~~~~~~~~a~~~~~~~~-~~gk~vv 335 (347)
+.|+++++.++++.+.+++ ..+|+++
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 7899999999999999875 4589988
No 112
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=6.4e-36 Score=268.00 Aligned_cols=301 Identities=28% Similarity=0.411 Sum_probs=249.6
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++.++|.. ..+++.|.|.+ .++||+|++.++++|++|++.+.+.+.. ..+|.++|||++|+|+.
T Consensus 1 ~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~ 67 (330)
T cd08245 1 KAAVVHAAGGP-----------LEPEEVPVPEP-GPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVE 67 (330)
T ss_pred CeEEEecCCCC-----------ceEEeccCCCC-CCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEE
Confidence 68888888643 44468888984 8999999999999999999999887642 34678899999999999
Q ss_pred eCCCCCCCCCCCEEE----------------------------EecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcch
Q 019049 82 VGPNVSNFKVGDTVC----------------------------GFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVA 133 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~----------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~ 133 (347)
+|++++++++||+|+ ++...|+|++|+.++.+.++++|+++++.+++.++..
T Consensus 68 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~ 147 (330)
T cd08245 68 VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCA 147 (330)
T ss_pred ECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhh
Confidence 999999999999997 2323589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 134 FGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 134 ~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
+.+||+++.. .++.++++|+|+|+ |++|.+++++|+.+|.+|+++++++++.+.++++|++.+++...... ...
T Consensus 148 ~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~- 221 (330)
T cd08245 148 GITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELD---EQA- 221 (330)
T ss_pred HHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcch---HHh-
Confidence 9999999854 78999999999976 88999999999999999999999999999999999988887655443 221
Q ss_pred HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHH
Q 019049 214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSL 292 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (347)
.. .++|++++|++. .....++++++++|+++.++.............++.++.++.++.... ...+
T Consensus 222 ---~~-~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 288 (330)
T cd08245 222 ---AA-GGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---------RADL 288 (330)
T ss_pred ---cc-CCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---------HHHH
Confidence 22 479999999875 667889999999999999986543322222334567777887776433 3678
Q ss_pred HHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 293 RELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 293 ~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
+++++++.++.+++ ..+.+++++++++|+.+.++...||+|+
T Consensus 289 ~~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 289 QEALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 88899999999986 4578999999999999999998888874
No 113
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.3e-35 Score=263.85 Aligned_cols=298 Identities=24% Similarity=0.337 Sum_probs=243.4
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHH-hccCCCC-CCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCC
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQI-LGKYQEK-PPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL 101 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 101 (347)
..+++++.|.+ .++||+|++.++++|++|+..+ .|..... +..|.++|+|++|+|+.+|++++++++||+|+++. .
T Consensus 7 ~~~~~~~~~~l-~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~ 84 (312)
T cd08269 7 FEVEEHPRPTP-GPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-G 84 (312)
T ss_pred eEEEECCCCCC-CCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-C
Confidence 44567888995 9999999999999999999987 6654321 23477899999999999999999999999999986 4
Q ss_pred CcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Q 019049 102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAV 180 (347)
Q Consensus 102 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~ 180 (347)
|+|++|+.++.+.++++|+++ .+++....+++++++++. .++++++++|+|+|+ |++|.+++|+|+..|++ |+++
T Consensus 85 g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~ 160 (312)
T cd08269 85 GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAI 160 (312)
T ss_pred CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Confidence 899999999999999999998 333322378889999985 888999999999975 99999999999999998 9999
Q ss_pred ecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCC
Q 019049 181 ARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPV 259 (347)
Q Consensus 181 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 259 (347)
++++++.+.++++|++.+++.....+ .+.+.+.+.+.++|+++||.|. .....++++++++|+++.+|........
T Consensus 161 ~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~ 237 (312)
T cd08269 161 DRRPARLALARELGATEVVTDDSEAI---VERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRP 237 (312)
T ss_pred CCCHHHHHHHHHhCCceEecCCCcCH---HHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcc
Confidence 99999999889999988888766666 5666677777889999999986 4668899999999999999865422222
Q ss_pred cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee--eeceeeChhhHHHHHHHHHcCCc-ceeEEE
Q 019049 260 IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI--HISHTYSPSEANLAFSAIEDRKV-IGKVMI 335 (347)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gk~vv 335 (347)
++...+..++..+.++... ++....+.++++++++.++.+++ .+.+.|++++++++++.+.+++. .+|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 238 VPFQTWNWKGIDLINAVER-----DPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred cCHHHHhhcCCEEEEeccc-----CccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 3334456677777665432 22333578899999999999986 36788999999999999999864 578776
No 114
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.6e-35 Score=266.46 Aligned_cols=293 Identities=27% Similarity=0.452 Sum_probs=235.8
Q ss_pred eeeccccCCCCCCCCeEEEEEEEecCChhhHHHHh-ccCC-CCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe---
Q 019049 24 VLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQIL-GKYQ-EKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF--- 98 (347)
Q Consensus 24 ~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~-g~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 98 (347)
..+++.+.|.+ +++||+|++.++++|++|+.... +... ....+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 9 ~~~~~~~~p~l-~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 87 (339)
T cd08232 9 LRVEERPAPEP-GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSR 87 (339)
T ss_pred eEEEEcCCCCC-CCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCC
Confidence 44567888994 99999999999999999998764 3221 112457789999999999999999999999999862
Q ss_pred ----------------------c-------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCC
Q 019049 99 ----------------------A-------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 149 (347)
Q Consensus 99 ----------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 149 (347)
. .+|+|++|+.++.+.++++|+++++++|+. +.+++++|+++.....+ +
T Consensus 88 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~ 165 (339)
T cd08232 88 PCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-A 165 (339)
T ss_pred cCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-C
Confidence 1 258999999999999999999999999876 58889999998666666 9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
+++|||.|+ |++|.+++|+|+.+|+ +|+++++++++.+.++++|+++++++++..+ ... .....++|+++||
T Consensus 166 ~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~--~~~~~~vd~vld~ 238 (339)
T cd08232 166 GKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAY--AADKGDFDVVFEA 238 (339)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhh--hccCCCccEEEEC
Confidence 999999875 9999999999999999 8999999988888888999999888765431 111 1123469999999
Q ss_pred CCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee-
Q 019049 229 VGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI- 306 (347)
Q Consensus 229 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~- 306 (347)
.|. ..+..++++|+++|+++.++...... ..+...++.++.++.+.... .+.++++++++.++.+++
T Consensus 239 ~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~ 307 (339)
T cd08232 239 SGAPAALASALRVVRPGGTVVQVGMLGGPV-PLPLNALVAKELDLRGSFRF----------DDEFAEAVRLLAAGRIDVR 307 (339)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEecCCCCc-cCcHHHHhhcceEEEEEecC----------HHHHHHHHHHHHcCCCCch
Confidence 986 56788999999999999998544221 22233345677777765421 356788899999999874
Q ss_pred -eeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 307 -HISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 307 -~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
.+.++|++++++++++.+.++...||+|+++
T Consensus 308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 3778999999999999999888899999864
No 115
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.7e-35 Score=267.20 Aligned_cols=293 Identities=26% Similarity=0.343 Sum_probs=233.7
Q ss_pred eccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEe-----
Q 019049 26 SKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGF----- 98 (347)
Q Consensus 26 ~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----- 98 (347)
+++.+.|. |+++||+||+.++++|++|++.+.+.... ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 31 ~~~~~~p~-~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 109 (364)
T PLN02702 31 IQPFKLPP-LGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISC 109 (364)
T ss_pred EEeccCCC-CCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCC
Confidence 35677787 58999999999999999999988763211 12357789999999999999999999999999861
Q ss_pred --------------------c---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 99 --------------------A---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 99 --------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
. ..|+|++|+.++.+.++++|++++++++++. .++.++|+++ ...++.++++|+|
T Consensus 110 ~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI 187 (364)
T PLN02702 110 WRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLV 187 (364)
T ss_pred CCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEE
Confidence 1 1489999999999999999999999998753 4566688887 7788999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcCCcEEEeCCC--CCchhhHHHHHHH--hcCCcccEEEeCCC
Q 019049 156 LGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLGVDHVVDLSN--ESVIPSVKEFLKA--RKLKGVDVLYDPVG 230 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~~~--~~~~~~d~v~d~~g 230 (347)
+|+ |++|++++|+++..|++ |++++.++++.+.++++|++.++++.. .++ .+.+... +.+.++|++|||+|
T Consensus 188 ~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g 263 (364)
T PLN02702 188 MGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDV---ESEVEEIQKAMGGGIDVSFDCVG 263 (364)
T ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccH---HHHHHHHhhhcCCCCCEEEECCC
Confidence 975 99999999999999995 778888888899999999998877542 344 2333222 23457999999999
Q ss_pred c-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCcee--ee
Q 019049 231 G-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLIT--IH 307 (347)
Q Consensus 231 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~~ 307 (347)
+ ..+..++++++++|+++.+|..... ...+...+..+++++.+++.. ...++.+++++.++.+. +.
T Consensus 264 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~~~l~~~~~ 332 (364)
T PLN02702 264 FNKTMSTALEATRAGGKVCLVGMGHNE-MTVPLTPAAAREVDVVGVFRY----------RNTWPLCLEFLRSGKIDVKPL 332 (364)
T ss_pred CHHHHHHHHHHHhcCCEEEEEccCCCC-CcccHHHHHhCccEEEEeccC----------hHHHHHHHHHHHcCCCCchHh
Confidence 5 6778999999999999999865432 223444567788888876532 14567889999999886 34
Q ss_pred eceeeCh--hhHHHHHHHHHcCCcceeEEEE
Q 019049 308 ISHTYSP--SEANLAFSAIEDRKVIGKVMIA 336 (347)
Q Consensus 308 ~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~ 336 (347)
+.+.|++ +++++|++.+.+++..+|+|+.
T Consensus 333 ~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 333 ITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred eEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 6677555 8999999999988888899985
No 116
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=3e-35 Score=260.97 Aligned_cols=304 Identities=33% Similarity=0.472 Sum_probs=253.3
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCC--CCCCCCcccCCceeEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQ--EKPPLPFVPGSDYSGT 78 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~--~~~~~p~~~G~e~~G~ 78 (347)
|||++++.++..+. ..+++.+.|.+ +++||+|++.++++|+.|+..+.|... ....+|..+|||++|+
T Consensus 1 ~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~ 70 (309)
T cd05289 1 MKAVRIHEYGGPEV---------LELADVPTPEP-GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGV 70 (309)
T ss_pred CceEEEcccCCccc---------eeecccCCCCC-CCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEE
Confidence 89999998886532 22356677774 899999999999999999998877542 1234578899999999
Q ss_pred EEEeCCCCCCCCCCCEEEEec---CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEE
Q 019049 79 VDAVGPNVSNFKVGDTVCGFA---ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLV 155 (347)
Q Consensus 79 V~~vG~~v~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI 155 (347)
|+.+|++++++++||+|+++. ..|+|++|+.++...++++|+++++.+++.++..+.++++++.....+.++++|+|
T Consensus 71 v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv 150 (309)
T cd05289 71 VVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLI 150 (309)
T ss_pred EEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEE
Confidence 999999999999999999986 24899999999999999999999999999999999999999977777999999999
Q ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchH
Q 019049 156 LGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTK 235 (347)
Q Consensus 156 ~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~ 235 (347)
+|++|.+|++++++++..|++|++++.++ +.+.++++|.+.+++....++ .. .+.+.++|.+++|+|+....
T Consensus 151 ~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~---~~----~~~~~~~d~v~~~~~~~~~~ 222 (309)
T cd05289 151 HGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDF---ER----AAAPGGVDAVLDTVGGETLA 222 (309)
T ss_pred ecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCch---hh----ccCCCCceEEEECCchHHHH
Confidence 99999999999999999999999998877 888888899888887766554 21 34556799999999998888
Q ss_pred HHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChh
Q 019049 236 ESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPS 315 (347)
Q Consensus 236 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~ 315 (347)
.++++++++|+++.+|....... ....++.++...... +. .+.++++++++.++.+++.+++.|+++
T Consensus 223 ~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (309)
T cd05289 223 RSLALVKPGGRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE------PD--GEQLAELAELVEAGKLRPVVDRVFPLE 289 (309)
T ss_pred HHHHHHhcCcEEEEEcCCCcchh-----hhhhccceEEEEEec------cc--HHHHHHHHHHHHCCCEEEeeccEEcHH
Confidence 89999999999999986543211 334556666655432 11 467888999999999987788999999
Q ss_pred hHHHHHHHHHcCCcceeEEE
Q 019049 316 EANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 316 ~~~~a~~~~~~~~~~gk~vv 335 (347)
+++++++.+..+...+|+++
T Consensus 290 ~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 290 DAAEAHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHHHHHhCCCCCcEeC
Confidence 99999999998887778763
No 117
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-34 Score=260.82 Aligned_cols=320 Identities=35% Similarity=0.534 Sum_probs=257.4
Q ss_pred ceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEE
Q 019049 2 EALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDA 81 (347)
Q Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~ 81 (347)
||+++...+.+. .+.+ ++.+.|. |.++||+|++.++++|+.|+....|..+..+..|.++|||++|+|+.
T Consensus 1 ~~~~~~~~~~~~--------~~~~-~~~~~~~-~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~ 70 (337)
T cd08275 1 RAVVLTGFGGLD--------KLKV-EKEALPE-PSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEA 70 (337)
T ss_pred CeEEEcCCCCcc--------ceEE-EecCCCC-CCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEE
Confidence 567776666542 2333 4566677 58999999999999999999988776544345577899999999999
Q ss_pred eCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch
Q 019049 82 VGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG 161 (347)
Q Consensus 82 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~ 161 (347)
+|+++.++++||+|+++...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++....++.++++|+|+|++|+
T Consensus 71 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~ 150 (337)
T cd08275 71 VGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGG 150 (337)
T ss_pred ECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcch
Confidence 99999999999999999766999999999999999999999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhc
Q 019049 162 VGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKL 240 (347)
Q Consensus 162 ~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 240 (347)
+|++++++++.. +..++... .+++.+.++++|++.+++....++ ...+...+ +.++|+++||+|+.....++++
T Consensus 151 ~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-~~~~d~v~~~~g~~~~~~~~~~ 225 (337)
T cd08275 151 VGLAAGQLCKTVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDY---VEEVKKIS-PEGVDIVLDALGGEDTRKSYDL 225 (337)
T ss_pred HHHHHHHHHHHccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcH---HHHHHHHh-CCCceEEEECCcHHHHHHHHHh
Confidence 999999999998 43333332 355778888899988888776665 44455555 4689999999998878889999
Q ss_pred cccCCEEEEEeecCCCC-CC---------------cchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCce
Q 019049 241 LNWGAQILVIGFASGEI-PV---------------IPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLI 304 (347)
Q Consensus 241 l~~~G~~v~~g~~~~~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 304 (347)
++++|+++.+|...... .. .....++.++.++.++.........+ .....+.++++++.++.+
T Consensus 226 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 304 (337)
T cd08275 226 LKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERE-LLTEVMDKLLKLYEEGKI 304 (337)
T ss_pred hccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChH-HHHHHHHHHHHHHHCCCC
Confidence 99999999998654211 00 11134567888888887653333333 334567889999999999
Q ss_pred eeeeceeeChhhHHHHHHHHHcCCcceeEEEEe
Q 019049 305 TIHISHTYSPSEANLAFSAIEDRKVIGKVMIAF 337 (347)
Q Consensus 305 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 337 (347)
++.....|++++++++++.+.++...||+++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 305 KPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred CCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 877788999999999999999988889999864
No 118
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.7e-35 Score=260.67 Aligned_cols=275 Identities=28% Similarity=0.424 Sum_probs=229.5
Q ss_pred CceEEecccCCCCccccCCCCceeeeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEE
Q 019049 1 MEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVD 80 (347)
Q Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~ 80 (347)
||+++..+.+. .. ..+++++.|.+ .++||+|++.++++|++|+....+.+. ....|.++|+|++|+|+
T Consensus 1 ~~~~~~~~~~~-~~---------~~~~~~~~p~~-~~~~v~V~v~~~~l~~~d~~~~~g~~~-~~~~p~~~G~e~~G~V~ 68 (306)
T cd08258 1 MKALVKTGPGP-GN---------VELREVPEPEP-GPGEVLIKVAAAGICGSDLHIYKGDYD-PVETPVVLGHEFSGTIV 68 (306)
T ss_pred CeeEEEecCCC-Cc---------eEEeecCCCCC-CCCeEEEEEEEEEechhhHHHHcCCCC-cCCCCeeeccceEEEEE
Confidence 89999887542 21 44578999994 999999999999999999998887652 23457789999999999
Q ss_pred EeCCCCCCCCCCCEEEEec----------------------------CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcc
Q 019049 81 AVGPNVSNFKVGDTVCGFA----------------------------ALGSFAQFIVADQSELFPVPKGCDLLAAAALPV 132 (347)
Q Consensus 81 ~vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 132 (347)
.+|++++.+++||+|+++. ..|+|++|++++...++++|+++++++++ ++.
T Consensus 69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~ 147 (306)
T cd08258 69 EVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTE 147 (306)
T ss_pred EECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhc
Confidence 9999999999999998864 14899999999999999999999999887 778
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe--cChhhHHHHHhcCCcEEEeCCCCCchhhH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA--RGAEKIKFLKSLGVDHVVDLSNESVIPSV 210 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~--~~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 210 (347)
.+.++|+++...++++++++|+|.| +|++|.+++|+|+..|++|+++. .+.++.+.++++|++++ ++...++ .
T Consensus 148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~---~ 222 (306)
T cd08258 148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDL---A 222 (306)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCH---H
Confidence 8899999998889999999999976 59999999999999999988763 34557788889999888 7776666 5
Q ss_pred HHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 211 KEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 211 ~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
+.+...+.+.++|+++||.|. ..+...+++++++|+++.+|........++...++.+++++.|++.++ .
T Consensus 223 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~ 293 (306)
T cd08258 223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSST---------P 293 (306)
T ss_pred HHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCc---------h
Confidence 556666667789999999975 567889999999999999988653333445566778999999998765 4
Q ss_pred HHHHHHHHHHHcC
Q 019049 290 DSLRELLLWAAKG 302 (347)
Q Consensus 290 ~~~~~~~~~l~~g 302 (347)
++++++++++++|
T Consensus 294 ~~~~~~~~~~~~~ 306 (306)
T cd08258 294 ASWETALRLLASG 306 (306)
T ss_pred HhHHHHHHHHhcC
Confidence 6788888888765
No 119
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=6e-35 Score=256.68 Aligned_cols=290 Identities=32% Similarity=0.456 Sum_probs=246.5
Q ss_pred CeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeee
Q 019049 38 TAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFP 117 (347)
Q Consensus 38 ~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ 117 (347)
+||+|++.++++|++|++...|.. ..+|.++|||++|+|+++|+++.++++||+|+++. .|+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~---~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL---PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC---CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence 589999999999999999987764 24577899999999999999999999999999986 48999999999999999
Q ss_pred CCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcC--C
Q 019049 118 VPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG--V 195 (347)
Q Consensus 118 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g--~ 195 (347)
+|+++++.+++.+++++.++|+++....++++|++|+|+|++|++|++++|+++..|++|++++.++++.+.+++.| +
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~ 156 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV 156 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence 99999999999999999999999888889999999999998899999999999999999999999999999998888 7
Q ss_pred cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCC-CCcchhHhhhcceEEEE
Q 019049 196 DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI-PVIPANIALVKNWTVHG 274 (347)
Q Consensus 196 ~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~ 274 (347)
+.+++....++ .+.+.+.+.+.++|.+++|+|+..+..++++++++|+++.++...... .... ...+.++.++..
T Consensus 157 ~~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~ 232 (293)
T cd05195 157 DHIFSSRDLSF---ADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLG-MRPFLRNVSFSS 232 (293)
T ss_pred ceEeecCchhH---HHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccc-hhhhccCCeEEE
Confidence 77887665555 556666777778999999999988889999999999999998654321 1111 122455677777
Q ss_pred EEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 275 LYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
..+..+....+....+.+.++.+++.++.+++.....+.+++++++++.+..+...||+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 233 VDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred EeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 6655554445555567888999999999998878888999999999999998888888763
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.6e-34 Score=254.66 Aligned_cols=295 Identities=31% Similarity=0.441 Sum_probs=235.2
Q ss_pred eeccccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCC--CCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecC--
Q 019049 25 LSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQE--KPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAA-- 100 (347)
Q Consensus 25 ~~~~~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-- 100 (347)
.+++.+.|. |+++||+|++.++++|++|++...|..+. ....|..+|||++|+|+++|+++.++++||+|+++..
T Consensus 15 ~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~ 93 (319)
T cd08267 15 LEVEVPIPT-PKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK 93 (319)
T ss_pred ccccCCCCC-CCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC
Confidence 456788888 59999999999999999999998776522 1234668999999999999999999999999999863
Q ss_pred -CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Q 019049 101 -LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179 (347)
Q Consensus 101 -~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~ 179 (347)
.|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....++++++|+|+|++|++|++++++++..|++|++
T Consensus 94 ~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~ 173 (319)
T cd08267 94 GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTG 173 (319)
T ss_pred CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEE
Confidence 5899999999999999999999999999999999999999987788999999999999999999999999999999999
Q ss_pred EecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc--chHHHHhccccCCEEEEEeecCCCC
Q 019049 180 VARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK--LTKESLKLLNWGAQILVIGFASGEI 257 (347)
Q Consensus 180 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~ 257 (347)
++.+ ++.+.++++|++.+++....++ . ...+.+.++|++++|+|+. ........++++|+++.+|......
T Consensus 174 ~~~~-~~~~~~~~~g~~~~~~~~~~~~---~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~ 246 (319)
T cd08267 174 VCST-RNAELVRSLGADEVIDYTTEDF---V---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGL 246 (319)
T ss_pred EeCH-HHHHHHHHcCCCEeecCCCCCc---c---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccc
Confidence 9875 7888889999988887766554 2 3345567899999999853 2233444599999999998654321
Q ss_pred CCcc---hhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEE
Q 019049 258 PVIP---ANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVM 334 (347)
Q Consensus 258 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v 334 (347)
.... ..........+..... .+. .+.++++++++.++.+++.+.+.|++++++++++.+.++...+|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 247 LLVLLLLPLTLGGGGRRLKFFLA------KPN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred cccccccchhhccccceEEEEEe------cCC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 1110 0000111112222111 111 5788899999999999987889999999999999999888778876
Q ss_pred E
Q 019049 335 I 335 (347)
Q Consensus 335 v 335 (347)
+
T Consensus 319 v 319 (319)
T cd08267 319 I 319 (319)
T ss_pred C
Confidence 4
No 121
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=1.4e-33 Score=247.65 Aligned_cols=284 Identities=33% Similarity=0.514 Sum_probs=238.2
Q ss_pred EEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCC
Q 019049 42 VRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKG 121 (347)
Q Consensus 42 i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 121 (347)
|++.++++|++|++...|.++ .|.++|||++|+|+++|++++++++||+|+++. .|+|++|+.++.+.++++|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-PGSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-CCceeeEEEccHHHeEECCCC
Confidence 789999999999999877643 356899999999999999999999999999986 389999999999999999999
Q ss_pred CCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEE
Q 019049 122 CDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVV 199 (347)
Q Consensus 122 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~ 199 (347)
+++.+++.+++.+.++|+++.....+.+|++|+|+|++|.+|++++++++..|++|+++++++++.+.++++|+ +.++
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 156 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF 156 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence 99999999999999999998788899999999999998999999999999999999999999999999999998 7788
Q ss_pred eCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCC-CCCcchhHhhhcceEEEEEEec
Q 019049 200 DLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGE-IPVIPANIALVKNWTVHGLYWG 278 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
++...++ .+.+.+.+.+.++|.++|++++.....++++++++|+++.+|..... ....+... +.++.++.+..+.
T Consensus 157 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (288)
T smart00829 157 SSRDLSF---ADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLD 232 (288)
T ss_pred eCCCccH---HHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHH
Confidence 8776665 55566666677899999999987778899999999999999865321 11122222 4667777776654
Q ss_pred cccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 279 SYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
.+. ..+....+.+..+++++.++.+++...+.|++++++++++.+..+...+|+++
T Consensus 233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 233 ALE-EGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred Hhh-cChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 433 33433456778889999999988766788999999999999998877778763
No 122
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.7e-33 Score=244.65 Aligned_cols=232 Identities=19% Similarity=0.251 Sum_probs=192.0
Q ss_pred ccCCceeEEEEEeCCCCC------CCCCCCEEEEe----------------------------------cCCCcceeeEe
Q 019049 70 VPGSDYSGTVDAVGPNVS------NFKVGDTVCGF----------------------------------AALGSFAQFIV 109 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~----------------------------------~~~g~~~~~~~ 109 (347)
++|||++|+|+++|++|+ ++++||||+.. ..+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999998 89999999531 02489999999
Q ss_pred eeCC-CeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhH
Q 019049 110 ADQS-ELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKI 187 (347)
Q Consensus 110 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~ 187 (347)
++++ .++++|+++++++++.+++.+.|+|+++. .....++++|+|+|+ |++|++++|+|+.+|++ |++++.+++|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 9997 79999999999999999999999999984 455669999999998 99999999999999996 99999899999
Q ss_pred HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecCC-CCCCcchhHh
Q 019049 188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFASG-EIPVIPANIA 265 (347)
Q Consensus 188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~ 265 (347)
+.++++|++.+++..+ . .+.+.+.+.+.++|++|||+|. ..+..++++++++|+++.+|.... ....++...+
T Consensus 159 ~~a~~~Ga~~~i~~~~--~---~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 159 ELALSFGATALAEPEV--L---AERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred HHHHHcCCcEecCchh--h---HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 9999999999887543 2 3445566677789999999987 457899999999999999996542 2224556678
Q ss_pred hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcC--cee--eeeceeeChhhH
Q 019049 266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG--LIT--IHISHTYSPSEA 317 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~l~--~~~~~~~~~~~~ 317 (347)
+.+++++.++..+. .+.++++++++.++ +++ ..++++|+++++
T Consensus 234 ~~~~~~i~g~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 234 VRRWLTIRGVHNYE---------PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred HhCCcEEEecCCCC---------HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 88999999976433 36788899999874 444 348888998863
No 123
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=9.7e-32 Score=221.58 Aligned_cols=299 Identities=22% Similarity=0.260 Sum_probs=243.5
Q ss_pred ccCCCCCCCCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCC----ceeEEEEEeCCCCCCCCCCCEEEEecCCCcc
Q 019049 29 EPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGS----DYSGTVDAVGPNVSNFKVGDTVCGFAALGSF 104 (347)
Q Consensus 29 ~~~p~~~~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~ 104 (347)
...+..+++++|+||..|.+.+|--...+....+...-.|..+|. ..+|+|++ |+.+++++||.|+++. +|
T Consensus 29 ~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~---gW 103 (343)
T KOG1196|consen 29 VELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV---GW 103 (343)
T ss_pred ecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---cc
Confidence 333333589999999999999987655443332221223444553 56888888 5778999999999997 79
Q ss_pred eeeEeeeCCC--eeeCC--CCCCHHH-HccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEE
Q 019049 105 AQFIVADQSE--LFPVP--KGCDLLA-AAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIA 179 (347)
Q Consensus 105 ~~~~~~~~~~--~~~~p--~~~~~~~-aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~ 179 (347)
.+|.++++.. .++++ .++++.- ...+.++.+|||.++.+....+.|++|+|.||+|.+|.++.|+|+.+|++|+.
T Consensus 104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVG 183 (343)
T KOG1196|consen 104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVG 183 (343)
T ss_pred eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEE
Confidence 9999998753 34444 3444443 34568899999999999999999999999999999999999999999999999
Q ss_pred EecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCC-
Q 019049 180 VARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEI- 257 (347)
Q Consensus 180 ~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~- 257 (347)
++.+++|...++ ++|.+..+||+++.. ..+.++.+.+.++|+.||.+|+..+...+..|+..||++.+|..+...
T Consensus 184 saGS~EKv~ll~~~~G~d~afNYK~e~~---~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ISqYN~ 260 (343)
T KOG1196|consen 184 SAGSKEKVDLLKTKFGFDDAFNYKEESD---LSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGMISQYNL 260 (343)
T ss_pred ecCChhhhhhhHhccCCccceeccCccC---HHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeeeehhccc
Confidence 999999999997 579999999999865 677777788999999999999999999999999999999999766321
Q ss_pred --C--CcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeE
Q 019049 258 --P--VIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKV 333 (347)
Q Consensus 258 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 333 (347)
+ ......++.|++.+.++....+.... .+.++.+..++++|+|+...+-.-.|++.++||.-|.+++..||.
T Consensus 261 ~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~----~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 261 ENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY----PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred cCCccccchhhheeeeEEeeeEEeechhhhh----HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhccCcccce
Confidence 1 12335678999999997766654333 578899999999999998776677899999999999999999999
Q ss_pred EEEeCC
Q 019049 334 MIAFDD 339 (347)
Q Consensus 334 vv~~~~ 339 (347)
++++..
T Consensus 337 iv~va~ 342 (343)
T KOG1196|consen 337 LVKVAR 342 (343)
T ss_pred EEEeec
Confidence 999865
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.2e-32 Score=236.29 Aligned_cols=236 Identities=38% Similarity=0.567 Sum_probs=204.1
Q ss_pred eEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEEec-------------------
Q 019049 39 AVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFA------------------- 99 (347)
Q Consensus 39 eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------- 99 (347)
||+|++.++++|+.|+..+.|..+....+|.++|+|++|+|+++|++++.|++||+|+++.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 6899999999999999999887653345678899999999999999999999999999875
Q ss_pred ----CCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC
Q 019049 100 ----ALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA 175 (347)
Q Consensus 100 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~ 175 (347)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++.....+.++++|+|+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 2589999999999999999999999999999999999999997777779999999999966 99999999999999
Q ss_pred EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEEeecC
Q 019049 176 TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 176 ~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+|+++++++++.+.++++|++.+++....+. .+.+. .+.+.++|+++++++. .....++++++++|+++.++...
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEEDL---EEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCCH---HHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 9999999999999999999988888776665 33444 5566789999999998 77788999999999999998765
Q ss_pred CCCCCcchhHhhhcceEEEEEEecc
Q 019049 255 GEIPVIPANIALVKNWTVHGLYWGS 279 (347)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (347)
...........+.+++++.++....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (271)
T cd05188 236 GGPPLDDLRRLLFKELTIIGSTGGT 260 (271)
T ss_pred CCCCcccHHHHHhcceEEEEeecCC
Confidence 4433233445678899999987655
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=100.00 E-value=3.7e-33 Score=262.73 Aligned_cols=295 Identities=23% Similarity=0.311 Sum_probs=260.3
Q ss_pred CCCeEEEEEEEecCChhhHHHHhccCCCCC------CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEe
Q 019049 36 SSTAVRVRVKATSLNYANYLQILGKYQEKP------PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIV 109 (347)
Q Consensus 36 ~~~eV~i~v~~~~i~~~d~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~ 109 (347)
.++.=+--|.|+.+|..|++...|+.+--. .....+|-|++|+ .+.|.||+++.+-.++++.+.
T Consensus 1443 ~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvpAksLATt~l 1512 (2376)
T KOG1202|consen 1443 CPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVPAKSLATTVL 1512 (2376)
T ss_pred CCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeeehhhhhhhhh
Confidence 467777889999999999999999874211 1245789999888 688999999998889999999
Q ss_pred eeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 110 ADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 110 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
++.++++.+|.+.++++|++.|+-|.|+|++|...+.+++|++||||+++|++|++++.+|.++|++||.|+.+++|+++
T Consensus 1513 ~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRef 1592 (2376)
T KOG1202|consen 1513 ASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREF 1592 (2376)
T ss_pred cchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh----cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcchhHh
Q 019049 190 LKS----LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIA 265 (347)
Q Consensus 190 ~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 265 (347)
++. +-..++.|+++.++ .+-+++.|.|+|+|+|+|....+.++.+++||+..|||..+|.......+.-....
T Consensus 1593 L~~rFPqLqe~~~~NSRdtsF---Eq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMav 1669 (2376)
T KOG1202|consen 1593 LLKRFPQLQETNFANSRDTSF---EQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAV 1669 (2376)
T ss_pred HHHhchhhhhhcccccccccH---HHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhh
Confidence 964 34677888888888 77889999999999999999999999999999999999999976544333333467
Q ss_pred hhcceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEEEeCCCCCc
Q 019049 266 LVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIAFDDMKSI 343 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~~~~~~~ 343 (347)
+.++.+++|..+........+.+++...-+.+-+++|.++|..+++|+-.++++||+.|.+++++||+|+++-.++..
T Consensus 1670 fLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~eE~~ 1747 (2376)
T KOG1202|consen 1670 FLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAEEPA 1747 (2376)
T ss_pred hhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEcccccc
Confidence 899999999999888877766677777777777888999999999999999999999999999999999999776654
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1.9e-29 Score=220.50 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=202.8
Q ss_pred CCCcccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhc
Q 019049 66 PLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA 145 (347)
Q Consensus 66 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~ 145 (347)
++|.++|||++|+|+++|++++++++||+|+++. .|++|++++.+.++++|+++++.+++.+ ..+++||+++ ..+
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~ 93 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDA 93 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC---CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-Hhc
Confidence 5789999999999999999999999999999974 6999999999999999999999999888 8899999998 478
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHhcC-CcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIKFLKSLG-VDHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
+++++++++|+|+ |.+|++++++|+.+|++ |+++++++++.+.++++| ++.+++... ..+.+.++|
T Consensus 94 ~~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d 161 (277)
T cd08255 94 EPRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGAD 161 (277)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCC
Confidence 9999999999975 99999999999999998 999999999999889999 555443221 112456899
Q ss_pred EEEeCCCc-cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc---hhHHHHHHHHHHHH
Q 019049 224 VLYDPVGG-KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP---HVLEDSLRELLLWA 299 (347)
Q Consensus 224 ~v~d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l 299 (347)
++|||++. .....++++++++|+++.+|..... .......+..+..++.+..........+ ....+.++++++++
T Consensus 162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 240 (277)
T cd08255 162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLL 240 (277)
T ss_pred EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHH
Confidence 99999885 5668899999999999999876543 2222223444666777766544322221 12236788999999
Q ss_pred HcCceeeeeceeeChhhHHHHHHHHHcC-CcceeEE
Q 019049 300 AKGLITIHISHTYSPSEANLAFSAIEDR-KVIGKVM 334 (347)
Q Consensus 300 ~~g~l~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~v 334 (347)
.++.+++.+.+.|++++++++++.+.++ ....|++
T Consensus 241 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 241 AEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred HcCCccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 9999987788899999999999999876 3344654
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.78 E-value=4.7e-18 Score=130.95 Aligned_cols=128 Identities=37% Similarity=0.576 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC-ccchHHHHh
Q 019049 161 GVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG-GKLTKESLK 239 (347)
Q Consensus 161 ~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g-~~~~~~~~~ 239 (347)
++|++++|+|+..|++|++++++++|++.++++|+++++++++.++ .+.+.+.+++.++|++|||+| ...++.+++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~---~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDF---VEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSH---HHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhccccccccccccc---ccccccccccccceEEEEecCcHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999887 778888888889999999999 578899999
Q ss_pred ccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHHHHHHHHH
Q 019049 240 LLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAA 300 (347)
Q Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 300 (347)
+++++|+++.+|........++...++.+++++.+++.++ ++.+++.++++.
T Consensus 78 ~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~---------~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS---------PEDFQEALQLLA 129 (130)
T ss_dssp HEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG---------HHHHHHHHHHHH
T ss_pred HhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC---------HHHHHHHHHHhc
Confidence 9999999999998885555577788999999999998776 466777776664
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.75 E-value=3.1e-18 Score=127.37 Aligned_cols=82 Identities=34% Similarity=0.543 Sum_probs=69.7
Q ss_pred CCeEEEEEEEecCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCCCCCCCCCCEEEE-------------------
Q 019049 37 STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCG------------------- 97 (347)
Q Consensus 37 ~~eV~i~v~~~~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~------------------- 97 (347)
|+||+|||.++|+|++|++.+.+.......+|.++|||++|+|+++|+++++|++||+|+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 6999999999999999999999864445678999999999999999999999999999963
Q ss_pred --------ecCCCcceeeEeeeCCCeeeC
Q 019049 98 --------FAALGSFAQFIVADQSELFPV 118 (347)
Q Consensus 98 --------~~~~g~~~~~~~~~~~~~~~~ 118 (347)
+..+|+|++|+++++++++|+
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 123499999999999999875
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.53 E-value=1.2e-14 Score=111.38 Aligned_cols=124 Identities=29% Similarity=0.390 Sum_probs=81.0
Q ss_pred cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC--ccch-HHHHhccccCCEEEEEeecCCCCCCcchhHhhhcc
Q 019049 193 LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG--GKLT-KESLKLLNWGAQILVIGFASGEIPVIPANIALVKN 269 (347)
Q Consensus 193 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g--~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 269 (347)
|||++++|+++.++ +...++|+||||+| .+.+ ..++++| ++|+++.++. .........+.
T Consensus 1 LGAd~vidy~~~~~----------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDTDF----------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCSHH----------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHC
T ss_pred CCcCEEecCCCccc----------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcc
Confidence 68999999995443 45689999999999 5433 6777888 9999998873 11111111222
Q ss_pred eEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCCcceeEEE
Q 019049 270 WTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 335 (347)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv 335 (347)
..+....+...... ....+.++++.+++.+|++++.+.++|+++++++|++.+.+++..||+||
T Consensus 64 ~~~~~~~~~~~~~~--~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPN--AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--H--HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCC--chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333332211000 22356799999999999999999999999999999999999999999996
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.48 E-value=5.6e-12 Score=116.46 Aligned_cols=253 Identities=18% Similarity=0.166 Sum_probs=152.9
Q ss_pred CeEEEEEEEe-cCChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCC----CCCCCCCCEEEEecCCCccee------
Q 019049 38 TAVRVRVKAT-SLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN----VSNFKVGDTVCGFAALGSFAQ------ 106 (347)
Q Consensus 38 ~eV~i~v~~~-~i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~g~~~~------ 106 (347)
.+|+|+--|+ +.+.+|-.....+-..... .-+. + +-+|..+..- +..++.|+.++++-+...-.+
T Consensus 31 ~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~-~~v~--~-~diilkV~~P~~~e~~~l~~g~~li~~l~p~~~~~l~~~l~ 106 (509)
T PRK09424 31 FEVVVESGAGQLASFDDAAYREAGAEIVDG-AAVW--Q-SDIILKVNAPSDDEIALLREGATLVSFIWPAQNPELLEKLA 106 (509)
T ss_pred CEEEEeCCCCcCCCCCHHHHHHCCCEEecC-cccc--c-CCEEEEeCCCCHHHHHhcCCCCEEEEEeCcccCHHHHHHHH
Confidence 6788887754 3455676544322111001 1112 2 4566655433 346999999999865321111
Q ss_pred ---eEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHH----hc----------CCCCCCEEEEecCCchHHHHHHHH
Q 019049 107 ---FIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVH----RA----------QLSSGQVLLVLGAAGGVGVAAVQI 169 (347)
Q Consensus 107 ---~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~----~~----------~~~~~~~VlI~g~~g~~G~~~~~l 169 (347)
...+..+.+-++.+.-++.... +++-...|.++.. .. +..++++|+|+|+ |.+|+++++.
T Consensus 107 ~~~it~ia~e~vpr~sraq~~d~ls--sma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~Ai~~ 183 (509)
T PRK09424 107 ARGVTVLAMDAVPRISRAQSLDALS--SMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAIGA 183 (509)
T ss_pred HcCCEEEEeecccccccCCCccccc--chhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHHHHH
Confidence 1223334444444333322211 2223333444322 21 2357999999999 9999999999
Q ss_pred HHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCc---------h-hhHHHHHHH-hc-CCcccEEEeCCCcc----
Q 019049 170 GKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV---------I-PSVKEFLKA-RK-LKGVDVLYDPVGGK---- 232 (347)
Q Consensus 170 a~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~---------~-~~~~~~~~~-~~-~~~~d~v~d~~g~~---- 232 (347)
|+.+|++|++++.+++|++.++++|++++ ++..+.+. . +..+...+. .+ ..++|++|+|++.+
T Consensus 184 Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~a 263 (509)
T PRK09424 184 AGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPA 263 (509)
T ss_pred HHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccC
Confidence 99999999999999999999999999854 55433211 0 111222222 11 14799999999963
Q ss_pred --c-hHHHHhccccCCEEEEEeecCCCC--CCcchhHhhh-cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceee
Q 019049 233 --L-TKESLKLLNWGAQILVIGFASGEI--PVIPANIALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITI 306 (347)
Q Consensus 233 --~-~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~ 306 (347)
. .+++++.++++|++++++...+.. ...+...++. +++++.|..- + | .+.-.+..+++.++.++.
T Consensus 264 P~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~----P---~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 264 PKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L----P---SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred cchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C----c---hhHHHHHHHHHHhCCccH
Confidence 3 488999999999999999853321 2233344555 7888888652 1 1 133345788888888764
No 131
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.42 E-value=5.4e-12 Score=113.75 Aligned_cols=175 Identities=17% Similarity=0.133 Sum_probs=131.7
Q ss_pred HHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049 138 HVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 216 (347)
Q Consensus 138 ~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 216 (347)
+.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.|.+.++.+|+..+ + .++..
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~---------~~e~v-- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T---------MEEAV-- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c---------HHHHH--
Confidence 445444433 368999999999 999999999999999999999999999999999998543 1 11111
Q ss_pred hcCCcccEEEeCCCcc-chHH-HHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHHHHHH-
Q 019049 217 RKLKGVDVLYDPVGGK-LTKE-SLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLR- 293 (347)
Q Consensus 217 ~~~~~~d~v~d~~g~~-~~~~-~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (347)
.++|++|+|+|.+ .+.. .+++++++|+++.+|... ..++...+..+++++.++...... ..++
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~~---~eId~~~L~~~el~i~g~~~~~~~--------~~~~~ 321 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHFD---VEIDVKGLKENAVEVVNIKPQVDR--------YELPD 321 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCCC---CccCHHHHHhhccEEEEccCCcce--------EEcCC
Confidence 3679999999985 4555 489999999999998542 236666778888888887654311 1233
Q ss_pred -HHHHHHHcCce-e--eeecee-----eChh-hHHHHHHHHHcCCc-ceeEEEEeCC
Q 019049 294 -ELLLWAAKGLI-T--IHISHT-----YSPS-EANLAFSAIEDRKV-IGKVMIAFDD 339 (347)
Q Consensus 294 -~~~~~l~~g~l-~--~~~~~~-----~~~~-~~~~a~~~~~~~~~-~gk~vv~~~~ 339 (347)
+.+.++.+|.+ + ..+++. ++|+ |+.++++.+.++.. .-|+++.+..
T Consensus 322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 67899999998 4 347778 8999 99999999987654 2467666543
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.75 E-value=4.1e-07 Score=84.28 Aligned_cols=213 Identities=17% Similarity=0.174 Sum_probs=123.4
Q ss_pred CeEEEEEEEec-CChhhHHHHhccCCCCCCCCcccCCceeEEEEEeCCC----CCCCCCCCEEEEecCCCcce-------
Q 019049 38 TAVRVRVKATS-LNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPN----VSNFKVGDTVCGFAALGSFA------- 105 (347)
Q Consensus 38 ~eV~i~v~~~~-i~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~----v~~~~~Gd~V~~~~~~g~~~------- 105 (347)
.+|+|+--|+. .+.+|.......-..... ... . -+.+|..|..- +..++.|+.++++.+...-.
T Consensus 30 ~~V~VE~gAG~~a~fsD~~Y~~aGA~I~~~--~~~-~-~adiIlkV~~P~~~e~~~l~~g~tli~~l~p~~n~~ll~~l~ 105 (511)
T TIGR00561 30 FDVLVETGAGAKASFADRAFESAGAGIVDG--TLF-W-QSDIILKVNAPSDAEIAELPAGKALVSFIWPAQNPELMEKLA 105 (511)
T ss_pred CEEEEECCCCcCCCcCHHHHHHcCCEEecc--cch-h-cCCEEEEeCCCCHHHHHhcCCCCEEEEEcCccCCHHHHHHHH
Confidence 67888777543 355676544322110000 001 1 24566666433 35599999999987532111
Q ss_pred --eeEeeeCCCeeeCCCCCCHHHHcc--CcchHHHHHHHHHHhcC----------CCCCCEEEEecCCchHHHHHHHHHH
Q 019049 106 --QFIVADQSELFPVPKGCDLLAAAA--LPVAFGTSHVALVHRAQ----------LSSGQVLLVLGAAGGVGVAAVQIGK 171 (347)
Q Consensus 106 --~~~~~~~~~~~~~p~~~~~~~aa~--l~~~~~~a~~~l~~~~~----------~~~~~~VlI~g~~g~~G~~~~~la~ 171 (347)
....+..+.+-++.+.-++..... -...+.....+.....+ -.++++|+|.|+ |.+|+++++.++
T Consensus 106 ~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~~lgr~~~g~~taag~vp~akVlViGa-G~iGl~Aa~~ak 184 (511)
T TIGR00561 106 AKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAIGAAN 184 (511)
T ss_pred HcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHHHhhhhcCCceecCCCCCCCEEEEECC-CHHHHHHHHHHH
Confidence 111222233333332211111110 01122333333222222 235789999999 999999999999
Q ss_pred HcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCC-----C----c-hhhHHHHHHHhc--CCcccEEEeCC---Cc--c-
Q 019049 172 VCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNE-----S----V-IPSVKEFLKARK--LKGVDVLYDPV---GG--K- 232 (347)
Q Consensus 172 ~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~-----~----~-~~~~~~~~~~~~--~~~~d~v~d~~---g~--~- 232 (347)
.+|++|++++.+.++++.++++|++.+. +..+. . . .+..+...+.+. ..++|++|+|+ |. +
T Consensus 185 ~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~ 264 (511)
T TIGR00561 185 SLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPK 264 (511)
T ss_pred HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCe
Confidence 9999999999999999999999987632 22110 0 0 111222222222 35799999999 54 3
Q ss_pred -chHHHHhccccCCEEEEEeecCC
Q 019049 233 -LTKESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 233 -~~~~~~~~l~~~G~~v~~g~~~~ 255 (347)
..+..++.+++++.+++++...+
T Consensus 265 Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 265 LITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred eehHHHHhhCCCCCEEEEeeeCCC
Confidence 35788999999999999986654
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.64 E-value=3.7e-06 Score=73.68 Aligned_cols=95 Identities=22% Similarity=0.355 Sum_probs=75.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.+++|+|+|. |.+|..+++.++.+|++|+++++++++.+.++++|+..+. ...+.+.. ..+|+||+|
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~----------~~~l~~~l--~~aDiVI~t 217 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH----------LSELAEEV--GKIDIIFNT 217 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec----------HHHHHHHh--CCCCEEEEC
Confidence 5889999999 9999999999999999999999999888888888865431 11122222 368999999
Q ss_pred CCccch-HHHHhccccCCEEEEEeecCCC
Q 019049 229 VGGKLT-KESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 229 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
++...+ ...++.+++++.+++++...+.
T Consensus 218 ~p~~~i~~~~l~~~~~g~vIIDla~~pgg 246 (296)
T PRK08306 218 IPALVLTKEVLSKMPPEALIIDLASKPGG 246 (296)
T ss_pred CChhhhhHHHHHcCCCCcEEEEEccCCCC
Confidence 986544 5678899999999998766554
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.46 E-value=1.3e-06 Score=75.98 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=100.7
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHH-
Q 019049 144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKA- 216 (347)
Q Consensus 144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~- 216 (347)
.+.+.++++||.+|+ |. |..+.++++..|. +|++++.+++.++.+++. |...+ .....++ ...
T Consensus 72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~-------~~l~ 141 (272)
T PRK11873 72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEI-------EALP 141 (272)
T ss_pred hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcch-------hhCC
Confidence 467889999999998 66 8888888887765 699999999988888653 33221 1111111 111
Q ss_pred hcCCcccEEEeCCC-----c--cchHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCchhHH
Q 019049 217 RKLKGVDVLYDPVG-----G--KLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLE 289 (347)
Q Consensus 217 ~~~~~~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (347)
...+.||+|+.... + ..++.+.+.|+++|++++.+...... .+ ..+.+...+.+......
T Consensus 142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~--------- 208 (272)
T PRK11873 142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGA--------- 208 (272)
T ss_pred CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCC---------
Confidence 12347999985431 2 45788999999999999977554221 11 11222222221111110
Q ss_pred HHHHHHHHHHHc-Ccee--eeeceeeChhhHHHHHHHH--HcCCcceeEEEE
Q 019049 290 DSLRELLLWAAK-GLIT--IHISHTYSPSEANLAFSAI--EDRKVIGKVMIA 336 (347)
Q Consensus 290 ~~~~~~~~~l~~-g~l~--~~~~~~~~~~~~~~a~~~~--~~~~~~gk~vv~ 336 (347)
...+++.+++.+ |-.. ......+++++..++++.+ ..+...++.+..
T Consensus 209 ~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 260 (272)
T PRK11873 209 LQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIVS 260 (272)
T ss_pred CCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEEE
Confidence 112334455554 3222 3455678899999999988 555544555433
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.44 E-value=3.5e-06 Score=76.72 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=79.4
Q ss_pred HHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049 137 SHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 137 a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
.|+++.+..++. .|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+ ..+..
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~---------l~eal- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT---------MEEAA- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC---------HHHHH-
Confidence 456665443544 8999999999 9999999999999999999999988887766666754 221 12222
Q ss_pred HhcCCcccEEEeCCCcc-chH-HHHhccccCCEEEEEeecCC
Q 019049 216 ARKLKGVDVLYDPVGGK-LTK-ESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~~-~~~-~~~~~l~~~G~~v~~g~~~~ 255 (347)
.++|++++|+|.. .+. ..+..+++++.++.+|....
T Consensus 266 ----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 266 ----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred ----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 3689999999974 454 68899999999999986654
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.26 E-value=1.6e-05 Score=72.61 Aligned_cols=101 Identities=18% Similarity=0.253 Sum_probs=78.5
Q ss_pred HHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHH
Q 019049 138 HVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKA 216 (347)
Q Consensus 138 ~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 216 (347)
+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+..+ + ..+..
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~----leEal-- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------T----LEDVV-- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------c----HHHHH--
Confidence 4455444333 57999999999 999999999999999999999998887777777776532 1 22222
Q ss_pred hcCCcccEEEeCCCccc--hHHHHhccccCCEEEEEeecC
Q 019049 217 RKLKGVDVLYDPVGGKL--TKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 217 ~~~~~~d~v~d~~g~~~--~~~~~~~l~~~G~~v~~g~~~ 254 (347)
...|++++|+|... ....++.|++++.++.+|...
T Consensus 308 ---~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 ---SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ---hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 25799999999753 378999999999999998754
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.24 E-value=1.8e-05 Score=71.73 Aligned_cols=102 Identities=21% Similarity=0.240 Sum_probs=77.2
Q ss_pred HHHHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049 137 SHVALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 137 a~~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
.+.++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|++++.++.+...+...|+. +.+ .++..
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~---------leeal- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT---------MEEAA- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC---------HHHHH-
Confidence 3444434333 368999999999 9999999999999999999999888877777777763 221 11111
Q ss_pred HhcCCcccEEEeCCCccc-hH-HHHhccccCCEEEEEeecC
Q 019049 216 ARKLKGVDVLYDPVGGKL-TK-ESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~~~-~~-~~~~~l~~~G~~v~~g~~~ 254 (347)
.+.|++|+++|... +. ..+..+++++.++.+|...
T Consensus 249 ----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 ----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred ----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 35799999999854 44 5889999999999988654
No 138
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.13 E-value=7.1e-05 Score=65.27 Aligned_cols=95 Identities=18% Similarity=0.295 Sum_probs=71.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++++|+|. |.+|..++..++.+|++|++.+++.++.+.+.+.|...+ . ...+.+.. ..+|++++|
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~---------~~~l~~~l--~~aDiVint 216 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P---------LNKLEEKV--AEIDIVINT 216 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c---------HHHHHHHh--ccCCEEEEC
Confidence 4789999999 999999999999999999999999888777777775422 1 11122222 478999999
Q ss_pred CCccch-HHHHhccccCCEEEEEeecCCC
Q 019049 229 VGGKLT-KESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 229 ~g~~~~-~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
++...+ ...++.++++..++.++...+.
T Consensus 217 ~P~~ii~~~~l~~~k~~aliIDlas~Pg~ 245 (287)
T TIGR02853 217 IPALVLTADVLSKLPKHAVIIDLASKPGG 245 (287)
T ss_pred CChHHhCHHHHhcCCCCeEEEEeCcCCCC
Confidence 986544 5577889998888888655433
No 139
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.07 E-value=0.00092 Score=58.16 Aligned_cols=239 Identities=15% Similarity=0.131 Sum_probs=130.0
Q ss_pred ccCCceeEEEEEeCCCCCCCCCCCEEEEecCCCcceeeEeeeCCCe----------------------eeCCCCC----C
Q 019049 70 VPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSEL----------------------FPVPKGC----D 123 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~----------------------~~~p~~~----~ 123 (347)
+|-..+ +.|++ |++.++.+|.||+|+.+. ++|+++.+..+ .+++.+- +
T Consensus 33 vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~---ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~ 106 (314)
T PF11017_consen 33 VPVWGF-ATVVE--SRHPGIAVGERLYGYFPM---ASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPE 106 (314)
T ss_pred cccceE-EEEEe--eCCCCccCccEEEeeccc---cceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcc
Confidence 333434 56666 889999999999998753 23333332111 1222111 2
Q ss_pred HHHH-ccCcchHHHHHHHHHHhcC---CCCCCEEEEecCCchHHHHHHHHHH-Hc-CCEEEEEecChhhHHHHHhcC-Cc
Q 019049 124 LLAA-AALPVAFGTSHVALVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGK-VC-GATIIAVARGAEKIKFLKSLG-VD 196 (347)
Q Consensus 124 ~~~a-a~l~~~~~~a~~~l~~~~~---~~~~~~VlI~g~~g~~G~~~~~la~-~~-g~~V~~~~~~~~~~~~~~~~g-~~ 196 (347)
.+.. +.+--.+.|.|. |.+... --..+.|+|..|++-.++.++..++ .. +.+++.+++.++ ..+.+.+| .+
T Consensus 107 ~e~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N-~~Fve~lg~Yd 184 (314)
T PF11017_consen 107 REDWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN-VAFVESLGCYD 184 (314)
T ss_pred hhHHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc-hhhhhccCCce
Confidence 2222 223334455553 323222 2234689999999999999998888 34 458999997665 56888898 67
Q ss_pred EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc-chHHHHhccccCC-EEEEEeecCCCCCCcchhHhhhcceEEEE
Q 019049 197 HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK-LTKESLKLLNWGA-QILVIGFASGEIPVIPANIALVKNWTVHG 274 (347)
Q Consensus 197 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 274 (347)
.++.|++-+- + ....--+++|+.|+. ....+.+.++..= ..+.+|.......... .. +.. .+-.-
T Consensus 185 ~V~~Yd~i~~------l----~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~-~~-l~g-~~~~~ 251 (314)
T PF11017_consen 185 EVLTYDDIDS------L----DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAP-AD-LPG-PRPEF 251 (314)
T ss_pred EEeehhhhhh------c----cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCcc-cc-CCC-CCcEE
Confidence 7877765322 1 123456889999984 4455556665542 4556664432211000 00 000 00111
Q ss_pred EEecccc-----ccCchhHHHHHHHHHHHHHcCcee-eeeceeeChhhHHHHHHHHHcCCc
Q 019049 275 LYWGSYK-----IHRPHVLEDSLRELLLWAAKGLIT-IHISHTYSPSEANLAFSAIEDRKV 329 (347)
Q Consensus 275 ~~~~~~~-----~~~~~~~~~~~~~~~~~l~~g~l~-~~~~~~~~~~~~~~a~~~~~~~~~ 329 (347)
++..... ...++...+.+.+.++-+.+.... ..+...-..+.+.++++.+.+++.
T Consensus 252 FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 252 FFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence 1111111 111222223333333333333333 357778899999999999988764
No 140
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.06 E-value=0.0001 Score=67.74 Aligned_cols=99 Identities=18% Similarity=0.269 Sum_probs=74.5
Q ss_pred HHHHHhcC-CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049 139 VALVHRAQ-LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 139 ~~l~~~~~-~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~ 217 (347)
.++.+..+ .-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|+..+ + ..+..
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~----leell--- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------T----LEDVV--- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------c----HHHHH---
Confidence 44434333 347999999999 999999999999999999999888776655555665422 1 22222
Q ss_pred cCCcccEEEeCCCcc-ch-HHHHhccccCCEEEEEeec
Q 019049 218 KLKGVDVLYDPVGGK-LT-KESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 218 ~~~~~d~v~d~~g~~-~~-~~~~~~l~~~G~~v~~g~~ 253 (347)
...|+++.++|.. .+ ...+..|++++.++.+|..
T Consensus 308 --~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 308 --ETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred --hcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 3689999999874 34 5789999999999998855
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.01 E-value=0.00014 Score=65.93 Aligned_cols=97 Identities=24% Similarity=0.337 Sum_probs=70.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
+.+|+|+|+ |.+|+.+++.++.+|++|+++++++++.+.+.. ++........+ .+.+.+.. ..+|++|+|
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l--~~aDvVI~a 237 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAV--KRADLLIGA 237 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHH--ccCCEEEEc
Confidence 456999999 999999999999999999999999888777754 55432222211 12222222 368999999
Q ss_pred C---Cc--cc--hHHHHhccccCCEEEEEeecCC
Q 019049 229 V---GG--KL--TKESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 229 ~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~ 255 (347)
+ +. +. ....++.+++++.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 7 32 32 3778889999999999986644
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.01 E-value=2.1e-05 Score=75.68 Aligned_cols=97 Identities=16% Similarity=0.310 Sum_probs=67.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC---------------------hhhHHHHHhcCCcEEEeCCC-
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG---------------------AEKIKFLKSLGVDHVVDLSN- 203 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~---------------------~~~~~~~~~~g~~~v~~~~~- 203 (347)
...+|++|+|+|+ |++|+++++.++..|++|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3578999999999 999999999999999999999842 34667788899887776443
Q ss_pred CCchhhHHHHHHHhcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049 204 ESVIPSVKEFLKARKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI 250 (347)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~ 250 (347)
.+.. .... ..++|++|+++|... ....+......|.+..+
T Consensus 212 ~~~~--~~~~-----~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~ 252 (564)
T PRK12771 212 EDIT--LEQL-----EGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV 252 (564)
T ss_pred CcCC--HHHH-----HhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence 2221 1111 136899999999743 23333444445554443
No 143
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.00 E-value=3.8e-05 Score=63.62 Aligned_cols=80 Identities=26% Similarity=0.488 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC----cEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV----DHVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~----~~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
+++.++|.||++++|.+.++.+...|++|+.+.++.+|++.+. +++. ...+|..+..- .+...+.. ..+.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~---~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAA---VEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHH---HHHHHHHHHHhhCc
Confidence 4578999999999999999999999999999999999998885 5772 23344444322 23333321 2357
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+.++.+|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999984
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.97 E-value=4.1e-05 Score=75.38 Aligned_cols=115 Identities=23% Similarity=0.353 Sum_probs=74.7
Q ss_pred CcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe
Q 019049 102 GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA 181 (347)
Q Consensus 102 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~ 181 (347)
.++++|..+++..++.+ +..+++++.....+ ..+..+|+++||+|++|++|..+++.+...|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 45667777777766666 56666666421100 12233688999999999999999999999999999999
Q ss_pred cChhhHHHHH-hcCC---c--EEEeCCCCCchhhHHHHHHHh--cCCcccEEEeCCC
Q 019049 182 RGAEKIKFLK-SLGV---D--HVVDLSNESVIPSVKEFLKAR--KLKGVDVLYDPVG 230 (347)
Q Consensus 182 ~~~~~~~~~~-~~g~---~--~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d~~g 230 (347)
++.++.+.+. +++. . ...|..+.+ +++...+.. ..+++|++|+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~---~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEA---AVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHH---HHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988766553 3432 1 112333322 133333221 1347999999998
No 145
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.95 E-value=0.00011 Score=62.37 Aligned_cols=81 Identities=30% Similarity=0.399 Sum_probs=59.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC----C-cEEE--eCCCCCchhhHHHHHHHhc-
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG----V-DHVV--DLSNESVIPSVKEFLKARK- 218 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g----~-~~v~--~~~~~~~~~~~~~~~~~~~- 218 (347)
..+++++|+||++++|...+..+...|++++.+.|+.+|++.++ ++. . .+++ |..+.+- ...+.....
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~---~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEA---LERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhH---HHHHHHHHHh
Confidence 46789999999999999999999999999999999999988774 332 1 1233 3333332 444444333
Q ss_pred -CCcccEEEeCCCc
Q 019049 219 -LKGVDVLYDPVGG 231 (347)
Q Consensus 219 -~~~~d~v~d~~g~ 231 (347)
+..+|+.+|++|-
T Consensus 81 ~~~~IdvLVNNAG~ 94 (265)
T COG0300 81 RGGPIDVLVNNAGF 94 (265)
T ss_pred cCCcccEEEECCCc
Confidence 3479999999984
No 146
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.92 E-value=0.00016 Score=58.86 Aligned_cols=113 Identities=17% Similarity=0.269 Sum_probs=79.3
Q ss_pred HHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhcCCcEEEe-
Q 019049 126 AAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVDHVVD- 200 (347)
Q Consensus 126 ~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~g~~~v~~- 200 (347)
..-++..+.+.|. +.+...++++++||-+|+ +.|+.++-+++.-| +|+.+++.++=. +.++.+|...+..
T Consensus 51 ~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~ 125 (209)
T COG2518 51 CGQTISAPHMVAR--MLQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVR 125 (209)
T ss_pred CCceecCcHHHHH--HHHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEE
Confidence 3344444555555 347889999999999996 67999999998888 999999987733 3345678643332
Q ss_pred CCCCCchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEe
Q 019049 201 LSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG 251 (347)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 251 (347)
..+... .......||.|+-+.+.+.. ..+++.|+++|+++..-
T Consensus 126 ~gDG~~--------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 126 HGDGSK--------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred ECCccc--------CCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 222211 11123679999998887766 66789999999999853
No 147
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.92 E-value=9.5e-05 Score=65.46 Aligned_cols=108 Identities=25% Similarity=0.290 Sum_probs=76.3
Q ss_pred CCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCC---CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhH-
Q 019049 113 SELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL---SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKI- 187 (347)
Q Consensus 113 ~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~- 187 (347)
...+++|+.+..+.++.. .+.+.++.++...... -++.+|+|.|+ |.+|..+++.++..|+ +|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 356778888888877665 4667777776332221 36899999999 9999999999998876 799999998875
Q ss_pred HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCccch
Q 019049 188 KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLT 234 (347)
Q Consensus 188 ~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~ 234 (347)
+.++++|+. +.+.. ...+.. ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~---------~~~~~l--~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD---------ELLELL--NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH---------HHHHHH--hcCCEEEECCCCCch
Confidence 556678873 33211 111111 357999999998654
No 148
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.92 E-value=6.5e-05 Score=60.21 Aligned_cols=80 Identities=25% Similarity=0.391 Sum_probs=60.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcC---CcEEEeCCCCCchhhHHHHHHHhc--CCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLG---VDHVVDLSNESVIPSVKEFLKARK--LKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~~~~~--~~~~d 223 (347)
.|.+|||.||++|+|+..++-...+|-+|+++.++.++++.++... ...+.|..+.+- ..++.++.. ....+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~---~~~lvewLkk~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDS---RRELVEWLKKEYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhh---HHHHHHHHHhhCCchh
Confidence 4779999999999999999999999999999999999999998643 334444444432 333444332 23579
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
++++++|-
T Consensus 81 vliNNAGI 88 (245)
T COG3967 81 VLINNAGI 88 (245)
T ss_pred eeeecccc
Confidence 99999883
No 149
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.91 E-value=0.0003 Score=59.71 Aligned_cols=105 Identities=28% Similarity=0.408 Sum_probs=68.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-Hhc---CCcEEEeCCCCCchhhHHHHHHHhc--CCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSL---GVDHVVDLSNESVIPSVKEFLKARK--LKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~---g~~~v~~~~~~~~~~~~~~~~~~~~--~~~~ 222 (347)
++++|+|+|++|++|..+++.+...|++|+++++++++.+.+ ++. +..+.+..+-.+ .+...+..+... ..++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999998877655 222 222223222111 122333333221 2468
Q ss_pred cEEEeCCCccc------------------------hHHHHhccccCCEEEEEeecC
Q 019049 223 DVLYDPVGGKL------------------------TKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 223 d~v~d~~g~~~------------------------~~~~~~~l~~~G~~v~~g~~~ 254 (347)
|.++.+.|... ++.++.+++++|+++.++...
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 99998887411 233445667788999887654
No 150
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.89 E-value=0.00041 Score=59.51 Aligned_cols=141 Identities=20% Similarity=0.266 Sum_probs=89.7
Q ss_pred CCCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Q 019049 88 NFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAV 167 (347)
Q Consensus 88 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~ 167 (347)
.+++||+++-.. .|.++.. +...++.++++++|..+. -+.+.. ....+. ..+.++++||-.|+ |. |.+++
T Consensus 66 p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGc-Gs-G~l~i 135 (250)
T PRK00517 66 PIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGC-GS-GILAI 135 (250)
T ss_pred CEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCC-cH-HHHHH
Confidence 377888766543 5666654 667889999998887654 211111 222221 12568899999998 54 77776
Q ss_pred HHHHHcCC-EEEEEecChhhHHHHHhc----CCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc----chHHHH
Q 019049 168 QIGKVCGA-TIIAVARGAEKIKFLKSL----GVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK----LTKESL 238 (347)
Q Consensus 168 ~la~~~g~-~V~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~----~~~~~~ 238 (347)
.++ ..|+ +|++++.++...+.+++. +....+.... +...||+|+...... .+..+.
T Consensus 136 ~~~-~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~--------------~~~~fD~Vvani~~~~~~~l~~~~~ 200 (250)
T PRK00517 136 AAA-KLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQ--------------GDLKADVIVANILANPLLELAPDLA 200 (250)
T ss_pred HHH-HcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEcc--------------CCCCcCEEEEcCcHHHHHHHHHHHH
Confidence 554 4677 699999999887777542 2211111000 011589998765543 346788
Q ss_pred hccccCCEEEEEeec
Q 019049 239 KLLNWGAQILVIGFA 253 (347)
Q Consensus 239 ~~l~~~G~~v~~g~~ 253 (347)
+.|+++|.+++.+..
T Consensus 201 ~~LkpgG~lilsgi~ 215 (250)
T PRK00517 201 RLLKPGGRLILSGIL 215 (250)
T ss_pred HhcCCCcEEEEEECc
Confidence 999999999987543
No 151
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.86 E-value=0.0011 Score=53.90 Aligned_cols=93 Identities=24% Similarity=0.277 Sum_probs=66.6
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc-
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG- 231 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~- 231 (347)
|+|.||+|.+|..+++.+...|.+|+++++++++.+. ..+.. ++..+-.+ ...+.... .++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~-~~~~d~~d----~~~~~~al--~~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVE-IIQGDLFD----PDSVKAAL--KGADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEE-EEESCTTC----HHHHHHHH--TTSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccc-cceeeehh----hhhhhhhh--hhcchhhhhhhhh
Confidence 7999999999999999999999999999999998776 44443 33333322 33444444 379999999984
Q ss_pred ----cchHHHHhccccCC--EEEEEeecC
Q 019049 232 ----KLTKESLKLLNWGA--QILVIGFAS 254 (347)
Q Consensus 232 ----~~~~~~~~~l~~~G--~~v~~g~~~ 254 (347)
.....+++.++..| +++.++..+
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 23455566665554 777776554
No 152
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00014 Score=63.39 Aligned_cols=80 Identities=16% Similarity=0.294 Sum_probs=57.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh---cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR---KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~---~~~~~d~ 224 (347)
.+++++|+|++|++|..+++.+...|++|+++++++++.+.+...+...+ .|..+.+. .+...+.. .++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPES---IAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHH---HHHHHHHHHHHcCCCccE
Confidence 46799999999999999999998899999999999888877766664432 23333221 33333221 1347899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+++++|.
T Consensus 80 li~~Ag~ 86 (277)
T PRK05993 80 LFNNGAY 86 (277)
T ss_pred EEECCCc
Confidence 9999873
No 153
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.002 Score=55.48 Aligned_cols=80 Identities=31% Similarity=0.440 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecChhhHH----HHHhcCCcEE---EeCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGAEKIK----FLKSLGVDHV---VDLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~~~~~----~~~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|++|++|..+++.+...|++ |++++++.++.+ .+++.+.... .|..+. +++.+..+.. .
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~ 81 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV---EDCRRVVAAADEA 81 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH---HHHHHHHHHHHHH
Confidence 5689999999999999999999999998 999998876544 2233443321 233322 2233333322 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+++|+++++.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 2468999999874
No 154
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.75 E-value=0.00027 Score=57.05 Aligned_cols=106 Identities=25% Similarity=0.332 Sum_probs=72.1
Q ss_pred CCCEEEEecC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC-cEEEeCCCCC-chhhHHHHHHHhcCCcccE
Q 019049 149 SGQVLLVLGA-AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVVDLSNES-VIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~-~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~-~~v~~~~~~~-~~~~~~~~~~~~~~~~~d~ 224 (347)
..+.|||.|+ .|++|.+.+.-....|+.|+++.++.++...+. .+|. ..-+|..+++ ..+...+++.. ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence 4568999987 678999999999999999999999988776665 6772 2334444433 33333344443 4568999
Q ss_pred EEeCCCcc----ch-------HH----------------HHhccccCCEEEEEeecCC
Q 019049 225 LYDPVGGK----LT-------KE----------------SLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 225 v~d~~g~~----~~-------~~----------------~~~~l~~~G~~v~~g~~~~ 255 (347)
.+|.+|.+ .+ ++ .-.+.+..|++|.+|...+
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 99988742 10 11 1236677899999986654
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.00021 Score=62.26 Aligned_cols=78 Identities=28% Similarity=0.447 Sum_probs=56.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCcccEEEe
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKGVDVLYD 227 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d 227 (347)
+++||+|++|++|..+++.+...|++|++++++.++.+.+...+...+ .|..+.+. .++..+.. ..+++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAA---LARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEEEE
Confidence 479999999999999999999999999999998887776666554332 34443322 33333322 2347999999
Q ss_pred CCCc
Q 019049 228 PVGG 231 (347)
Q Consensus 228 ~~g~ 231 (347)
++|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 156
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.74 E-value=9.6e-05 Score=56.85 Aligned_cols=93 Identities=24% Similarity=0.317 Sum_probs=61.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCc--EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVD--HVVDLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
.+++++|+|+ |++|.+++..+...|+ +|+++.|+.+|.+.+. .++.. ....+.+. .+. . ..+|+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~------~~~---~--~~~Di 78 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL------EEA---L--QEADI 78 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH------CHH---H--HTESE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH------HHH---H--hhCCe
Confidence 5789999999 9999999999999999 5999999999877664 45322 23333221 111 1 36899
Q ss_pred EEeCCCccch---HHHHhcccc-CCEEEEEeec
Q 019049 225 LYDPVGGKLT---KESLKLLNW-GAQILVIGFA 253 (347)
Q Consensus 225 v~d~~g~~~~---~~~~~~l~~-~G~~v~~g~~ 253 (347)
+|+|++.+.. ...+....+ .+.++.++.+
T Consensus 79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 79 VINATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred EEEecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 9999987432 333333332 2567766543
No 157
>PRK06182 short chain dehydrogenase; Validated
Probab=97.71 E-value=0.00051 Score=59.75 Aligned_cols=80 Identities=31% Similarity=0.430 Sum_probs=56.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+...+... ..|..+.+. ++...+.. ..+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEAS---IKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHH---HHHHHHHHHHhcCCCCEE
Confidence 4679999999999999999999889999999999988776665555332 234333222 33332211 23579999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
No 158
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.67 E-value=0.00091 Score=57.45 Aligned_cols=110 Identities=34% Similarity=0.456 Sum_probs=71.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEe-CCCCCchhhHHHHHHH--hcCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVD-LSNESVIPSVKEFLKA--RKLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~-~~~~~~~~~~~~~~~~--~~~~ 220 (347)
.|+.|+|.||++|+|.+++.-+-..|++++.+.+..++++.+ ++.+... ++. .-+..-.++.++..+. ...+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 678999999999999999988889999999988888877666 3344332 221 1111111223333322 2356
Q ss_pred cccEEEeCCCcc--------------------------chHHHHhccccC--CEEEEEeecCCCCC
Q 019049 221 GVDVLYDPVGGK--------------------------LTKESLKLLNWG--AQILVIGFASGEIP 258 (347)
Q Consensus 221 ~~d~v~d~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~ 258 (347)
++|+.+|.+|-. ....++..|+.. |+|+.++...+...
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~ 156 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP 156 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC
Confidence 899999998831 113344455444 99999987766543
No 159
>PRK12742 oxidoreductase; Provisional
Probab=97.66 E-value=0.0011 Score=56.20 Aligned_cols=103 Identities=23% Similarity=0.350 Sum_probs=65.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
.++++||+|++|++|..+++.+...|++|+.+.+ +.++.+.+ .+.+...+ ..+-.+. +.+.+.... .+++|+++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~~~~-~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAV-QTDSADR-DAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEE-ecCCCCH-HHHHHHHHH--hCCCcEEE
Confidence 4789999999999999999999999999988765 44444443 44554332 2222121 123333332 24689999
Q ss_pred eCCCccc----h----------------------HHHHhccccCCEEEEEeecCC
Q 019049 227 DPVGGKL----T----------------------KESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 227 d~~g~~~----~----------------------~~~~~~l~~~G~~v~~g~~~~ 255 (347)
+++|... . ..++..++..|+++.++....
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 9987411 0 123344566789998876543
No 160
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00042 Score=62.03 Aligned_cols=80 Identities=26% Similarity=0.437 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|+|+++++|..+++.+...|++|+++++++++.+.+ ++.|.... .|..+.+ +++.+.+.. ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~---~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD---QVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH---HHHHHHHHHHHhc
Confidence 568999999999999999999999999999999998876544 33454322 2333322 233333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 579999999983
No 161
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.58 E-value=0.00059 Score=64.43 Aligned_cols=48 Identities=25% Similarity=0.273 Sum_probs=41.7
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL 190 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~ 190 (347)
...+.+.|++|+|.||+|++|..+++.+...|++|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 345667899999999999999999999999999999999998876544
No 162
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0014 Score=56.56 Aligned_cols=80 Identities=23% Similarity=0.342 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EE--EeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HV--VDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.+++++|.|+++++|..+++.+...|++|++++++.++.+.+. +++.. .. .|..+. +...+..+.. ..+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDD---AAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH---HHHHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999999887655543 44422 12 233322 1233332221 12468
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++++++|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998873
No 163
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0016 Score=58.48 Aligned_cols=80 Identities=25% Similarity=0.387 Sum_probs=55.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE---EeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV---VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|+|++|++|..+++.+...|++|+++++++++.+.+ ++.|.... .|..+.+ +++...+.. ..
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~---~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE---AVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH---HHHHHHHHHHHHC
Confidence 467999999999999999999999999999999988766544 33453322 2333322 233333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|++++++|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 478999999884
No 164
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00069 Score=57.05 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=56.6
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
++++|+|++|++|...+..+...|++|+++++++++.+.+++++...++..+-.+ .++...+.+.....++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcCc
Confidence 5799999999999999998888999999999988776666555422222222111 223555555555567999998876
Q ss_pred c
Q 019049 231 G 231 (347)
Q Consensus 231 ~ 231 (347)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
No 165
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.54 E-value=0.0036 Score=53.70 Aligned_cols=117 Identities=21% Similarity=0.326 Sum_probs=82.4
Q ss_pred CCCCHHHHccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC
Q 019049 120 KGCDLLAAAALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV 195 (347)
Q Consensus 120 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~ 195 (347)
+++++++|- ..++..+..+.+++||++||=+|+ |.|.+++-+|+..|++|++++.++++.+.+++ .|.
T Consensus 49 ~~~tL~eAQ------~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl 120 (283)
T COG2230 49 PDMTLEEAQ------RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGL 120 (283)
T ss_pred CCCChHHHH------HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCC
Confidence 344666664 335556668999999999999998 68999999999999999999999998877754 553
Q ss_pred c---EEEeCCCCCchhhHHHHHHHhcCCcccEE-----EeCCCc----cchHHHHhccccCCEEEEEeecCCC
Q 019049 196 D---HVVDLSNESVIPSVKEFLKARKLKGVDVL-----YDPVGG----KLTKESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 196 ~---~v~~~~~~~~~~~~~~~~~~~~~~~~d~v-----~d~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
. .+.-.+-.++ .+.||-| |+.+|. ..+..+.++|+++|++++.......
T Consensus 121 ~~~v~v~l~d~rd~------------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~ 181 (283)
T COG2230 121 EDNVEVRLQDYRDF------------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPD 181 (283)
T ss_pred CcccEEEecccccc------------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCC
Confidence 3 1111111111 1237766 345565 2457788999999999987765543
No 166
>PRK06484 short chain dehydrogenase; Validated
Probab=97.52 E-value=0.012 Score=56.40 Aligned_cols=103 Identities=26% Similarity=0.413 Sum_probs=68.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcE---EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.++++||.|+++++|...++.+...|++|++++++.++.+.+.+ ++... ..|..+.+ .++.+.+.. ..+.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA---AVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH---HHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999999998887766653 44322 12333322 233333322 12478
Q ss_pred cEEEeCCCcc----c-----------------------hHHHHhccccCCEEEEEeecC
Q 019049 223 DVLYDPVGGK----L-----------------------TKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 223 d~v~d~~g~~----~-----------------------~~~~~~~l~~~G~~v~~g~~~ 254 (347)
|++++++|.. . .+.++..++.+|+++.++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 9999988731 0 122234556679999987654
No 167
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0024 Score=54.56 Aligned_cols=101 Identities=25% Similarity=0.436 Sum_probs=61.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|++|++|..++..+...|++|+++.++.. +.+.+ +..+.. ..+ |..+.+ ....+.+.. .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE---SVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHh
Confidence 4679999999999999999999889999999888653 23222 223322 122 333222 133332221 1
Q ss_pred CCcccEEEeCCCcc--------------------chHHHHhccccCCEEEEEee
Q 019049 219 LKGVDVLYDPVGGK--------------------LTKESLKLLNWGAQILVIGF 252 (347)
Q Consensus 219 ~~~~d~v~d~~g~~--------------------~~~~~~~~l~~~G~~v~~g~ 252 (347)
..++|+++.++|.. .++.+...+...|+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 24689998887631 12334455556688888865
No 168
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00088 Score=59.06 Aligned_cols=80 Identities=24% Similarity=0.385 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC--cEE---EeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHV---VDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.++++||+|++|++|..+++.+...|++|++++++.++.+.+ ++++. ... .|..+.+ +++...+.. ..+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~---~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA---AMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH---HHHHHHHHHHHHcC
Confidence 578999999999999999999999999999999988876655 34542 111 2333322 132322221 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|++++++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 78999999984
No 169
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.46 E-value=0.0012 Score=61.21 Aligned_cols=149 Identities=19% Similarity=0.257 Sum_probs=92.0
Q ss_pred ccCCceeEEEEEeCCCCCCCCCCCE-EEEecC--------CCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHH
Q 019049 70 VPGSDYSGTVDAVGPNVSNFKVGDT-VCGFAA--------LGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVA 140 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~~~~~Gd~-V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 140 (347)
.-|+|+++-+.+|+++....-+|+. ++|... .|......----...+++|..+..+.+ ....+.+.++.+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~~k~v~~~t~-i~~~~~Sv~~~A 169 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSVAKRVRTETG-IGAGAVSVASAA 169 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhhHhhhcC-CCCCCcCHHHHH
Confidence 4699999999999999877666664 322110 011111000000112344554443332 233456666767
Q ss_pred HHHhcC---CCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHH-HHHhcCCcEEEeCCCCCchhhHHHHHH
Q 019049 141 LVHRAQ---LSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIK-FLKSLGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 141 l~~~~~---~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
+..... -.++++|+|+|+ |.+|.++++.++..|+ +|+++.++.++.+ +++++|.. +++. ....+
T Consensus 170 v~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---------~~~~~ 238 (423)
T PRK00045 170 VELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---------DELPE 238 (423)
T ss_pred HHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---------HHHHH
Confidence 643222 247789999999 9999999999999998 8999999988765 55677753 3221 11112
Q ss_pred HhcCCcccEEEeCCCcc
Q 019049 216 ARKLKGVDVLYDPVGGK 232 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~~ 232 (347)
.. .++|+||+|+|.+
T Consensus 239 ~l--~~aDvVI~aT~s~ 253 (423)
T PRK00045 239 AL--AEADIVISSTGAP 253 (423)
T ss_pred Hh--ccCCEEEECCCCC
Confidence 12 3689999999863
No 170
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.44 E-value=0.0022 Score=50.18 Aligned_cols=95 Identities=19% Similarity=0.241 Sum_probs=65.2
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
-+-.|++++|.|- |-+|.-.++.++.+|++|++++.++-+.-.+..-|.... . .++. . ...|++
T Consensus 19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~---------~~~a---~--~~adi~ 82 (162)
T PF00670_consen 19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-T---------LEEA---L--RDADIF 82 (162)
T ss_dssp S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-----------HHHH---T--TT-SEE
T ss_pred eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-C---------HHHH---H--hhCCEE
Confidence 3458999999999 999999999999999999999999987777777776422 1 2222 1 467999
Q ss_pred EeCCCccc-h-HHHHhccccCCEEEEEeecCCC
Q 019049 226 YDPVGGKL-T-KESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 226 ~d~~g~~~-~-~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
+.++|... + .+-++.|+++-.+..+|....+
T Consensus 83 vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 83 VTATGNKDVITGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp EE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTS
T ss_pred EECCCCccccCHHHHHHhcCCeEEeccCcCcee
Confidence 99999843 3 6778899998888777654443
No 171
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0017 Score=56.11 Aligned_cols=80 Identities=23% Similarity=0.494 Sum_probs=54.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----CCc-EEE--eCCCCCchhhHHHHHHH-hcC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----GVD-HVV--DLSNESVIPSVKEFLKA-RKL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g~~-~v~--~~~~~~~~~~~~~~~~~-~~~ 219 (347)
.++++||+|+++++|.++++.+...|++|++++++.++.+.+.+ + +.. ..+ |..+.+ +.+.+.+. ...
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE---DLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH---HHHHHHHHHHhh
Confidence 57899999999999999999999999999999998876654432 1 321 122 333322 13333322 123
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|++++++|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 568999999874
No 172
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.41 E-value=0.0014 Score=58.50 Aligned_cols=81 Identities=28% Similarity=0.338 Sum_probs=56.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cC-Cc---EEEeCCCCCchhhHHHHHHHhcC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LG-VD---HVVDLSNESVIPSVKEFLKARKL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g-~~---~v~~~~~~~~~~~~~~~~~~~~~ 219 (347)
.|++++|+||++++|...++.+...|++|+++++++++.+.+.+ .+ .. ...|..+ +..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhcC
Confidence 47899999999999999998888899999999999987765432 11 11 1234432 232334555555544
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
..+|++++++|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 45779999887
No 173
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0015 Score=55.60 Aligned_cols=78 Identities=29% Similarity=0.442 Sum_probs=55.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+.+ .+...... ..++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~--~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDA---AIRAALAA--AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH---HHHHHHHH--hCCCCEEE
Confidence 56799999999999999999999999999999998877665543 443322 2333221 23333333 24689999
Q ss_pred eCCCc
Q 019049 227 DPVGG 231 (347)
Q Consensus 227 d~~g~ 231 (347)
+++|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 99874
No 174
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.39 E-value=0.0015 Score=56.35 Aligned_cols=80 Identities=28% Similarity=0.348 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCc-EEE--eCCCCCc-hhhHHHHHHHhcCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HVV--DLSNESV-IPSVKEFLKARKLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~~d 223 (347)
++++++|.|++|++|..+++.+...|++|++++++.++.+.+.+. +.. ..+ |..+.+. .+..+++.+. .+.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA--FGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH--hCCCC
Confidence 478999999999999999999999999999999988776666542 321 112 2222211 1112222222 24689
Q ss_pred EEEeCCC
Q 019049 224 VLYDPVG 230 (347)
Q Consensus 224 ~v~d~~g 230 (347)
++++++|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
No 175
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.0018 Score=55.34 Aligned_cols=79 Identities=20% Similarity=0.334 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE---EEeCCCCCchhhHHHHHHHhc--C
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH---VVDLSNESVIPSVKEFLKARK--L 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~---v~~~~~~~~~~~~~~~~~~~~--~ 219 (347)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+ +..+... ..|..+. +..++..+... .
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDE---EDVEATFAQIAEDF 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHHc
Confidence 478999999999999999999999999999999987765443 2234332 1222221 12333333221 2
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+.+|.+|.++|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 46899999887
No 176
>PRK06128 oxidoreductase; Provisional
Probab=97.39 E-value=0.0034 Score=55.41 Aligned_cols=83 Identities=22% Similarity=0.269 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KI----KFLKSLGVDHVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.++++||.|++|++|..++..+...|++|+++.++.+ +. +.++..|....+..-+..-.+.++++.+.. ..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999988776432 11 222334432222111111112233332211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 79999998873
No 177
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.38 E-value=0.0011 Score=60.37 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHH
Q 019049 133 AFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKE 212 (347)
Q Consensus 133 ~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 212 (347)
+....+..+....+++++++||-+|+ |.|..+..+++..|++|++++.+++..+.+++......+.....++ .
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~----~- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY----R- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch----h-
Confidence 34445555667788899999999998 5778888889888999999999999998887643221111111122 1
Q ss_pred HHHHhcCCcccEEEeC-----CCc----cchHHHHhccccCCEEEEEe
Q 019049 213 FLKARKLKGVDVLYDP-----VGG----KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 213 ~~~~~~~~~~d~v~d~-----~g~----~~~~~~~~~l~~~G~~v~~g 251 (347)
.. .+.||.|+.. +|. ..++.+.+.|+|+|.+++..
T Consensus 224 --~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 224 --DL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred --hc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11 2468988643 343 34577889999999998754
No 178
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.38 E-value=0.00046 Score=59.70 Aligned_cols=102 Identities=19% Similarity=0.321 Sum_probs=63.1
Q ss_pred HHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHH
Q 019049 139 VALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFL 214 (347)
Q Consensus 139 ~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~ 214 (347)
.-+.+++++++|++||-+|+ |.|..+..+++..|++|++++.++++.++++ +.|...-+...-.++.+
T Consensus 52 ~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~------ 123 (273)
T PF02353_consen 52 DLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD------ 123 (273)
T ss_dssp HHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG------
T ss_pred HHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc------
Confidence 34457889999999999998 4888899999999999999999999888774 35522111111112211
Q ss_pred HHhcCCcccEEE-----eCCCcc----chHHHHhccccCCEEEEEe
Q 019049 215 KARKLKGVDVLY-----DPVGGK----LTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 215 ~~~~~~~~d~v~-----d~~g~~----~~~~~~~~l~~~G~~v~~g 251 (347)
. ...||.|+ +.+|.. .++.+.++|+|+|++++-.
T Consensus 124 -~--~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 124 -L--PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp ------S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred -c--CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 12788875 345532 3577889999999998643
No 179
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0015 Score=57.44 Aligned_cols=80 Identities=34% Similarity=0.527 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|+|++|++|...++.+...|++|++++++.++.+.+.+ .+.. ..+ |..+.+ .+.+..+.. ..
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~~~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD---AVDALVADVEKRI 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH---HHHHHHHHHHHHc
Confidence 35799999999999999999998899999999999876654432 2322 122 222222 233333321 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|++++++|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
No 180
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0014 Score=55.08 Aligned_cols=78 Identities=26% Similarity=0.360 Sum_probs=56.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
++++|+|++|++|..+++.+...|++|++++++.++.+.++..+.. ...|..+.+ .++.+.....+.++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~---~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPA---SVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHH---HHHHHHHHhcCCCCCEEEECC
Confidence 4799999999999999988888899999999988877777665543 222333332 244444434445799999987
Q ss_pred Cc
Q 019049 230 GG 231 (347)
Q Consensus 230 g~ 231 (347)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 74
No 181
>PRK08017 oxidoreductase; Provisional
Probab=97.37 E-value=0.0014 Score=56.21 Aligned_cols=80 Identities=21% Similarity=0.350 Sum_probs=55.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEE-EeCCCCCc-hhhHHHHHHHhcCCcccEEEeC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHV-VDLSNESV-IPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~-~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
++++|+|++|++|..+++.+...|++|++++++.++.+.+++.++..+ .|..+.+. ....+.+.+.. +..+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALT-DNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhc-CCCCeEEEEC
Confidence 579999999999999999999999999999999988887777775433 23332211 11122222212 3468888888
Q ss_pred CCc
Q 019049 229 VGG 231 (347)
Q Consensus 229 ~g~ 231 (347)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 773
No 182
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.35 E-value=0.0024 Score=55.17 Aligned_cols=79 Identities=28% Similarity=0.413 Sum_probs=54.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
++++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ ++.. ..+ |..+.+ ..+...+.. ..+.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA---DNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH---HHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999998887766643 3321 222 222221 122222211 12478
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|++++++|
T Consensus 82 d~li~~ag 89 (263)
T PRK06200 82 DCFVGNAG 89 (263)
T ss_pred CEEEECCC
Confidence 99999987
No 183
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0021 Score=55.19 Aligned_cols=82 Identities=21% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhh-HHH----HHhcCC--cEEE--eCCCCCchhhHHHHH-H
Q 019049 147 LSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEK-IKF----LKSLGV--DHVV--DLSNESVIPSVKEFL-K 215 (347)
Q Consensus 147 ~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~-~~~----~~~~g~--~~v~--~~~~~~~~~~~~~~~-~ 215 (347)
+..+++|+|.||+|++|...++.+... |++|++++++.++ .+. ++..+. .+++ |..+.+- ..+.. +
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~---~~~~~~~ 81 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDS---HPKVIDA 81 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHH---HHHHHHH
Confidence 456789999999999999999877767 4899999998764 332 233332 1222 3332221 22222 2
Q ss_pred HhcCCcccEEEeCCCc
Q 019049 216 ARKLKGVDVLYDPVGG 231 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~ 231 (347)
....+++|+++++.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 2222579999987764
No 184
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0018 Score=56.00 Aligned_cols=80 Identities=26% Similarity=0.405 Sum_probs=53.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
+++++||.|++|++|..+++.+...|++|+++++++++.+.+.+ .+.. .+ .|..+.+. .....+.. ..
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEA---TAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHH---HHHHHHHHHHHc
Confidence 57899999999999999999999999999999998876554432 2322 12 23333221 32222221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|++++++|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 478999999873
No 185
>PRK06196 oxidoreductase; Provisional
Probab=97.34 E-value=0.0016 Score=58.00 Aligned_cols=79 Identities=27% Similarity=0.389 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
.+++++|+|++|++|..++..+...|++|++++++.++.+.+. ++.....+ |..+. +.++++.... ..+++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~---~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADL---ESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCH---HHHHHHHHHHHhcCCCCC
Confidence 4689999999999999999999889999999999887665443 23212222 33322 2233333322 135799
Q ss_pred EEEeCCC
Q 019049 224 VLYDPVG 230 (347)
Q Consensus 224 ~v~d~~g 230 (347)
++++++|
T Consensus 102 ~li~nAg 108 (315)
T PRK06196 102 ILINNAG 108 (315)
T ss_pred EEEECCC
Confidence 9999987
No 186
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0021 Score=55.18 Aligned_cols=80 Identities=23% Similarity=0.357 Sum_probs=54.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
++++|+|+|++|++|..+++.+...|++|+++++++.+.+.. .+++.. ...|..+.+. .+.+.... ..+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDA---VNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHH---HHHHHHHHHHHcCCCCE
Confidence 578999999999999999999999999999999988766544 344432 2223333221 33333321 1246899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998873
No 187
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0028 Score=54.82 Aligned_cols=80 Identities=29% Similarity=0.503 Sum_probs=53.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCc-EE--EeCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVD-HV--VDLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~-~v--~~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|.|+++++|...++.+...|++|+++++++++.+.+.+ . +.. .. .|..+. +++.++....
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDE---ADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCH---HHHHHHHHHHHH
Confidence 47899999999999999999999999999999998876654421 1 111 11 233332 2233333221
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
..+.+|++++++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 13468999999983
No 188
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.29 E-value=0.0047 Score=48.71 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=55.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|+|.|+ |.+|.--++.+...|++|++++ ++..+.+++++... . ....+ +...-.++|+|+-+
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~-~--~~~~~--------~~~dl~~a~lViaa 77 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYIT-W--KQKTF--------SNDDIKDAHLIYAA 77 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcE-E--Eeccc--------ChhcCCCceEEEEC
Confidence 5789999999 9999998888888999999885 33344455554221 1 11222 11123578999999
Q ss_pred CCccchHHHHhccccCCEEEE
Q 019049 229 VGGKLTKESLKLLNWGAQILV 249 (347)
Q Consensus 229 ~g~~~~~~~~~~l~~~G~~v~ 249 (347)
++++..+..+......+.++.
T Consensus 78 T~d~e~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 78 TNQHAVNMMVKQAAHDFQWVN 98 (157)
T ss_pred CCCHHHHHHHHHHHHHCCcEE
Confidence 998766655444433333443
No 189
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.29 E-value=0.0024 Score=51.64 Aligned_cols=87 Identities=23% Similarity=0.302 Sum_probs=63.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|.|+|. |.+|..+++.++.+|++|++.+++..........+... . + .+++.. ..|+|+.+
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~----~--~----l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY----V--S----LDELLA-----QADIVSLH 98 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE----S--S----HHHHHH-----H-SEEEE-
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee----e--e----hhhhcc-----hhhhhhhh
Confidence 5889999999 99999999999999999999999887655455555421 1 1 344443 46999988
Q ss_pred CCc-----cch-HHHHhccccCCEEEEEe
Q 019049 229 VGG-----KLT-KESLKLLNWGAQILVIG 251 (347)
Q Consensus 229 ~g~-----~~~-~~~~~~l~~~G~~v~~g 251 (347)
... ..+ ...++.|+++..+|.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hccccccceeeeeeeeeccccceEEEecc
Confidence 773 223 67889999999888764
No 190
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0024 Score=54.85 Aligned_cols=82 Identities=22% Similarity=0.377 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|+++++|...+..+...|++|+++++++++.+.+. +.+... .+..+-.+ .+..+...+.. ..+.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCC
Confidence 4679999999999999999999999999999999887665442 233222 22111111 11223333221 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 191
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.28 E-value=0.004 Score=54.03 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=60.1
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKARKLKG 221 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
...++++++|.|+ |++|.+++..+...|++|+++.++.++.+.+. +++ ........ . .....
T Consensus 113 ~~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---------~----~~~~~ 178 (270)
T TIGR00507 113 PLRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---------E----LPLHR 178 (270)
T ss_pred CCccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---------h----hcccC
Confidence 3345789999999 99999999888888999999999887765443 332 21221111 0 01246
Q ss_pred ccEEEeCCCccchH------HHHhccccCCEEEEEe
Q 019049 222 VDVLYDPVGGKLTK------ESLKLLNWGAQILVIG 251 (347)
Q Consensus 222 ~d~v~d~~g~~~~~------~~~~~l~~~G~~v~~g 251 (347)
+|++++|++..... .....++++..++++.
T Consensus 179 ~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~ 214 (270)
T TIGR00507 179 VDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMV 214 (270)
T ss_pred ccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence 89999999863211 1234567776666653
No 192
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.27 E-value=0.0076 Score=49.66 Aligned_cols=99 Identities=20% Similarity=0.429 Sum_probs=67.6
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcC-CcEEEeCCCCCchhhHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLG-VDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~~~~~ 215 (347)
...++.++++|+-.|+ |. |.+++++++..+ .+|++++.+++..+.++ .+| .+.+.... .+. .+...
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~----~~~l~ 106 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEA----PEILF 106 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ech----hhhHh
Confidence 4567889999999999 55 899999888764 58999999998777664 355 23222111 121 11111
Q ss_pred HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049 216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV 249 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 249 (347)
.. ...+|.||...+. ..+..+.+.|+++|+++.
T Consensus 107 ~~-~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 107 TI-NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred hc-CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 11 2479999986553 345778889999999985
No 193
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0029 Score=54.95 Aligned_cols=79 Identities=28% Similarity=0.355 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE--eCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV--DLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
+++++|+|++|++|..+++.+...|++|+++++++++.+.+. +++...++ |..+.+ +..+..+.. ..+++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPA---SFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHH---HHHHHHHHHHHHcCCCCE
Confidence 579999999999999999988889999999999888766543 44422222 333322 122222221 1247899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+++++|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999883
No 194
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0015 Score=56.34 Aligned_cols=82 Identities=32% Similarity=0.485 Sum_probs=55.0
Q ss_pred CCCCCEEEEecCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCcEE--E--eCCCCCchhhHHHHHHH
Q 019049 147 LSSGQVLLVLGAAG-GVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVDHV--V--DLSNESVIPSVKEFLKA 216 (347)
Q Consensus 147 ~~~~~~VlI~g~~g-~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~~~~~~~~~~~~~ 216 (347)
+..+++++|+|++| ++|.++++.+...|++|+++++++++.+...+ +|...+ + |..+. +..+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSE---AQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCH---HHHHHHHHH
Confidence 34578999999986 89999999999999999999988876654422 343222 2 22222 223333332
Q ss_pred h--cCCcccEEEeCCCc
Q 019049 217 R--KLKGVDVLYDPVGG 231 (347)
Q Consensus 217 ~--~~~~~d~v~d~~g~ 231 (347)
. ..+.+|++++++|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 2 12478999999984
No 195
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.002 Score=55.51 Aligned_cols=81 Identities=22% Similarity=0.329 Sum_probs=54.4
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc--EE--EeCCCCCchhhHHHHHHHh--cCC
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD--HV--VDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~--~v--~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
-+++++||.|++|++|..++..+...|++|+++.++.++.+.+.+ .... .+ .|..+.. .+....+.. ...
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPA---QVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH---HHHHHHHHHHHHhC
Confidence 477899999999999999999999999999999998776655543 2211 12 2333222 122222211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++|.++|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 196
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0025 Score=54.39 Aligned_cols=82 Identities=20% Similarity=0.337 Sum_probs=53.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
++++++|.|++|++|...++.+...|++|++++++.++.+... +++... .+..+-.+. +....+.+.. ..+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDV-AAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence 4679999999999999999999999999999999877655443 455332 221111111 1122222211 1246899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+++++|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998873
No 197
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0037 Score=53.98 Aligned_cols=82 Identities=28% Similarity=0.398 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c--C-CcEEEeCCCCCchhhHHHHHHHh-cCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L--G-VDHVVDLSNESVIPSVKEFLKAR-KLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~--g-~~~v~~~~~~~~~~~~~~~~~~~-~~~~~d 223 (347)
+++++||+|++|++|...+..+...|++|+++++++++.+.+.. + + ....+..+-.+. ++.+.+.+.. ..+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSE-AGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHhcCCCC
Confidence 46799999999999999999998999999999998876655532 2 2 112222111111 1223332221 135789
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
+++.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999874
No 198
>PRK06720 hypothetical protein; Provisional
Probab=97.24 E-value=0.0057 Score=48.94 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHH--hcCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKA--RKLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~--~~~~~ 221 (347)
.++.++|.|+++++|...+..+...|++|++++++.++.+.. .+.+... .+..+-.+. ++.+++.+. ...++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQ-GDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 578999999999999999998888999999999887654332 2234322 222222221 222332221 12347
Q ss_pred ccEEEeCCC
Q 019049 222 VDVLYDPVG 230 (347)
Q Consensus 222 ~d~v~d~~g 230 (347)
+|++++++|
T Consensus 94 iDilVnnAG 102 (169)
T PRK06720 94 IDMLFQNAG 102 (169)
T ss_pred CCEEEECCC
Confidence 899999888
No 199
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0043 Score=53.65 Aligned_cols=79 Identities=22% Similarity=0.356 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
++++++|.|++|++|..+++.+...|++|+++++++++.+.. .+.+.. ..+ |..+. ++++...+.. ..
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY---AAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH---HHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999987765433 222322 222 33222 2233333322 12
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+++|++|++.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 46899998876
No 200
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0026 Score=54.61 Aligned_cols=80 Identities=25% Similarity=0.337 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HV--VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||.|+++++|..+++.+...|++|++++++.++.+.+. ..+.. .. .|..+.+ ..+++.+.. ..
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ---QVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH---HHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999887665443 22322 11 2332221 133332221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 478999998873
No 201
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.23 E-value=0.0034 Score=53.62 Aligned_cols=82 Identities=23% Similarity=0.352 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
.+++++|.|++|++|..++..+...|++|++++++... .+.+++.+.. ..+..+-.+ .+.+....+.. ..+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999986531 2333444422 222211111 12233333221 124689
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
No 202
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0036 Score=55.67 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEE--eCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVV--DLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~--~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|+|+++++|..++..+...|++|++++++.++.+.+. ++ +.. .++ |..+. ++++++.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~---~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSL---ASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCH---HHHHHHHHHHHH
Confidence 4689999999999999999999899999999999887655442 11 111 122 33322 2233333321
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
..+.+|++++++|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 23578999998873
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0038 Score=53.65 Aligned_cols=82 Identities=30% Similarity=0.466 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cC-CcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LG-VDHVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g-~~~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|++|++|..++..+...|++|++++++.++.+.+.. .+ ...++..+-.+. +.+....... ..+.
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Confidence 57899999999999999999999999999999999887655432 12 122222221111 1122222211 1347
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 204
>PRK06194 hypothetical protein; Provisional
Probab=97.22 E-value=0.004 Score=54.53 Aligned_cols=82 Identities=22% Similarity=0.382 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h---cCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S---LGVDH-VVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~---~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.++++||+|++|++|..+++.+...|++|++++++.++.+... + .+... ++..+-.+ .++++++.... ..++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 3679999999999999999999999999999998876554432 2 23322 12222111 12233333221 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 205
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.22 E-value=0.0026 Score=50.60 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=51.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhc--CCc
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARG--AEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARK--LKG 221 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~--~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~--~~~ 221 (347)
++++|+|+++++|...++.+...|+ +|+.+.++ .++.+.+ ++.+....+-.-+....+..+++.+... ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999988888877 77888887 3433333 3445322222122222233444444332 457
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
No 206
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0035 Score=53.98 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=53.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC-C-cEE--EeCCCCCchhhHHHHHHHh-c--CCcc
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG-V-DHV--VDLSNESVIPSVKEFLKAR-K--LKGV 222 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g-~-~~v--~~~~~~~~~~~~~~~~~~~-~--~~~~ 222 (347)
+++||+|++|++|..+++.+...|++|++++++.++.+.+.. .+ . .++ .|..+.+. +.+..... . .+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAA---WDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHH---HHHHHHHHHHHcCCCC
Confidence 579999999999999999998899999999998887666543 32 1 122 23333221 33332221 1 3578
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|+++.++|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999884
No 207
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=97.21 E-value=0.017 Score=47.44 Aligned_cols=78 Identities=27% Similarity=0.351 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c----CCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L----GVDHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
.+.+++|.|++|++|..++..+...|++|+++.++.++.+.+.+ + +.. +......+ .....+.. .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~--~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSD----DAARAAAI--KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCC----HHHHHHHH--hcCC
Confidence 56799999999999999998888889999999999887665532 2 222 11111111 22222222 4689
Q ss_pred EEEeCCCccc
Q 019049 224 VLYDPVGGKL 233 (347)
Q Consensus 224 ~v~d~~g~~~ 233 (347)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999988654
No 208
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0039 Score=53.26 Aligned_cols=80 Identities=34% Similarity=0.429 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
++++++|+|++|++|..++..+...|++|+++++++++.+... ..+.. .++ |..+. +.++++.+.. ..
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP---ASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998877655442 22322 222 32222 2233333322 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|+++.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
No 209
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.007 Score=52.55 Aligned_cols=78 Identities=26% Similarity=0.323 Sum_probs=51.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE----EEeCCCCCchhhHHHHHHHh--cCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH----VVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++|+|++|++|..+++.+...|++|+++.+++++.+.. +..+... ..|..+.+. .+...... ..+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDA---VAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHH---HHHHHHHHHHhcC
Confidence 3799999999999999999999999999999887765433 2234321 234333222 22222221 134
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 210
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.18 E-value=0.0078 Score=51.84 Aligned_cols=79 Identities=14% Similarity=0.304 Sum_probs=49.9
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHHH-hc-CCc-EE--EeCCCCCchhhHHHHHHHh-
Q 019049 149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFLK-SL-GVD-HV--VDLSNESVIPSVKEFLKAR- 217 (347)
Q Consensus 149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~---~~~~~~~-~~-g~~-~v--~~~~~~~~~~~~~~~~~~~- 217 (347)
.+++++|.|++ +++|.++++.+...|++|+++.++. ++.+.+. ++ +.. .. .|..+. ++++++.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD---EEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH---HHHHHHHHHHH
Confidence 47899999997 7999999999989999999887542 3333332 33 211 11 233322 2233333322
Q ss_pred -cCCcccEEEeCCC
Q 019049 218 -KLKGVDVLYDPVG 230 (347)
Q Consensus 218 -~~~~~d~v~d~~g 230 (347)
..+.+|++++++|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 1257999999876
No 211
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0032 Score=53.11 Aligned_cols=81 Identities=20% Similarity=0.177 Sum_probs=54.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh---cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR---KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~---~~~ 220 (347)
.+++++|.|+++++|.+.+..+...|++|+++.++.++.+.+ ++.+.. ..+..+..+ .++.+++.... -+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999988876544 233432 222222222 12233333322 122
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++++++|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 212
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.003 Score=54.16 Aligned_cols=82 Identities=23% Similarity=0.287 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
+++++||.|++|++|..+++.+...|++|++++++++..+...+..... .+..+-.+. ++.+...... ...++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDS-QSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCH-HHHHHHHHHHHHHhCCCCE
Confidence 4779999999999999999999889999999999876544444432111 222221111 1233332221 1246899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999874
No 213
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.18 E-value=0.0017 Score=55.51 Aligned_cols=82 Identities=22% Similarity=0.310 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC--Cc-EEEeCCCCCchhhHHHHHHH--hcCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VD-HVVDLSNESVIPSVKEFLKA--RKLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g--~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~ 222 (347)
.++++||.|++|++|..+++.+...|++|+++++++++.+.+. .+. .. ..+..+-.+ .+.++...+. .....+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999999889999999999987765543 222 11 122111111 1123333221 123478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++|.++|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 214
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0048 Score=52.98 Aligned_cols=80 Identities=24% Similarity=0.375 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|++|++|..++..+...|++|+++++++++.+.+.+ .+.. ...|..+. +..+...+.. ..
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE---DQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH---HHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999998876544432 2322 12222222 1233222221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.++|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 468999998873
No 215
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0036 Score=54.58 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=54.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc-CCc-EE--EeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL-GVD-HV--VDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~-g~~-~v--~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.+++++|.|++|++|..+++.+...|++|+++++++++.+.+.+. +.. .. .|..+.+ .+....+.. ..+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~---~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFD---AIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH---HHHHHHHHHHHHhCCC
Confidence 457899999999999999999988999999999998877666543 211 11 2333222 122222211 12468
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++++++|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
No 216
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.17 E-value=0.0037 Score=55.68 Aligned_cols=94 Identities=24% Similarity=0.331 Sum_probs=62.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
+|+|+||+|-+|..+++.+...|.+|.+++++.++.......|...+. |..+. ..+.... .++|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~------~~l~~al--~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP------ETLPPSF--KGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH------HHHHHHH--CCCCEEEECCC
Confidence 699999999999999999988999999999987765555555654332 22221 2223333 36899999876
Q ss_pred ccc-------------hHHHHhccccCC--EEEEEeec
Q 019049 231 GKL-------------TKESLKLLNWGA--QILVIGFA 253 (347)
Q Consensus 231 ~~~-------------~~~~~~~l~~~G--~~v~~g~~ 253 (347)
... ...+++.++..| +++.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 311 123445555544 78877653
No 217
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.17 E-value=0.0036 Score=55.85 Aligned_cols=79 Identities=25% Similarity=0.334 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---Cc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VD-HV--VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~-~v--~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
++++++|+|++|++|..+++.+...|++|++++++.++.+.+. ++. .. .. .|..+. +++....+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDL---DSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCH---HHHHHHHHHHHHhC
Confidence 4779999999999999999999889999999999887765443 332 11 11 232222 2233333221 23
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
..+|++++++|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 46899999987
No 218
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.17 E-value=0.0046 Score=53.04 Aligned_cols=80 Identities=20% Similarity=0.338 Sum_probs=52.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHhcCCcE-E--EeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK--IKFLKSLGVDH-V--VDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~--~~~~~~~g~~~-v--~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|+++++|.++++.+...|++|+++.++..+ .+..++.+... . .|..+. +..+++.+.. ..++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQ---KDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCH---HHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999988775432 22334445322 1 233332 2233333321 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 219
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.17 E-value=0.0047 Score=53.01 Aligned_cols=80 Identities=25% Similarity=0.412 Sum_probs=53.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||+|++|++|..+++.+...|++|++++++.++.+.+ +..|... .+ |..+.. ..+.+.... ..
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD---AVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH---HHHHHHHHHHHhc
Confidence 478999999999999999999988999999999987765433 2233221 22 333222 233333221 23
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|++|.++|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 468999999874
No 220
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.13 E-value=0.001 Score=62.38 Aligned_cols=95 Identities=18% Similarity=0.153 Sum_probs=64.6
Q ss_pred HhcCCCCCCEEE----EecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh
Q 019049 143 HRAQLSSGQVLL----VLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 143 ~~~~~~~~~~Vl----I~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~ 217 (347)
.+.++++|+++| |+|++|++|.+++|+++..|++|+++.....+....+..+.+ .++|.+.... ...+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITD---PADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCC---HHHHHHHH
Confidence 467778999998 999889999999999999999999988766544333333433 4566555444 22221111
Q ss_pred cCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 218 KLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 218 ~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
..+...++.|.++|+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCCCEEEEEcccc
Confidence 23345667777888888876543
No 221
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0058 Score=52.61 Aligned_cols=80 Identities=29% Similarity=0.428 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cCCc-EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LGVD-HVVDLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
.+++++|.|+++++|...++.+...|++|++++++.++.+.+.+ .+.. ..+..+-.+ .++.....+.. +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CCC
Confidence 47899999999999999999998999999999998876654321 1321 222211111 22244444432 478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|+++++.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998873
No 222
>PRK09242 tropinone reductase; Provisional
Probab=97.12 E-value=0.0059 Score=52.50 Aligned_cols=80 Identities=26% Similarity=0.412 Sum_probs=53.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCcE-EE--eCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVDH-VV--DLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~~-v~--~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|+|++|++|..+++.+...|++|++++++.++.+.+.+ . +... .+ |..+. ++.+...+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD---EDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH---HHHHHHHHHHHH
Confidence 47899999999999999999999999999999998876654432 1 2211 12 22222 2233333221
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
..+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 13479999999984
No 223
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.006 Score=53.11 Aligned_cols=79 Identities=23% Similarity=0.310 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|+|++|++|..++..+...|++|++++++.++.+.+. ..|... .+ |..+. +++..+.+.. ..
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~---~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHR---EEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCH---HHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998877655432 234322 12 22221 2233332221 12
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+.+|++++++|
T Consensus 82 g~id~li~nAg 92 (275)
T PRK05876 82 GHVDVVFSNAG 92 (275)
T ss_pred CCCCEEEECCC
Confidence 46899999987
No 224
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0046 Score=53.35 Aligned_cols=82 Identities=24% Similarity=0.413 Sum_probs=52.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
++++||.|++|++|..+++.+...|++|+++++++++.+.+ +..+....+...+..-.+......+.. ...++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999999999999987655433 223432211111111111233333221 124689
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
+++.++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 225
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.11 E-value=0.0064 Score=50.27 Aligned_cols=91 Identities=16% Similarity=0.240 Sum_probs=61.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.|++|||+|+ |.+|..-++.+...|++|++++.... ....+.+.|.-..+ ...+. ... -.++++||-
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~---~~~~~---~~d-----l~~~~lVi~ 75 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWL---ARCFD---ADI-----LEGAFLVIA 75 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEE---eCCCC---HHH-----hCCcEEEEE
Confidence 4779999999 99999999999999999999987543 33333344421111 11221 111 147899999
Q ss_pred CCCcc-chHHHHhccccCCEEEEEe
Q 019049 228 PVGGK-LTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 228 ~~g~~-~~~~~~~~l~~~G~~v~~g 251 (347)
+++.+ ....+....+..|..+.+.
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 99986 4456667777778777653
No 226
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.11 E-value=0.0046 Score=57.97 Aligned_cols=79 Identities=24% Similarity=0.389 Sum_probs=53.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHhc--CCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKARK--LKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~~--~~~~ 222 (347)
++++++|+|++|++|..+++.+...|++|++++++. ++.+.+ .+++.. ...|..+.+. .+.+..... .+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~---~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDA---PARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHH---HHHHHHHHHHhCCCC
Confidence 478999999999999999999999999999988743 223222 345533 2234443322 333333221 2478
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|++|+++|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999988
No 227
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0058 Score=54.10 Aligned_cols=81 Identities=28% Similarity=0.394 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|++|++|..+++.+...|++|++++++.++.+.+. ++ +.. ..+..+-.+. +.++...+.. ..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSL-ASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCH-HHHHHHHHHHHhhC
Confidence 5689999999999999999988889999999999877654331 11 211 1222221111 2233333322 13
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+++|++++++|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 46899999987
No 228
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.11 E-value=0.0073 Score=55.81 Aligned_cols=139 Identities=19% Similarity=0.251 Sum_probs=90.5
Q ss_pred ccCCceeEEEEEeCCCCCCCCCCCEE-E----------------EecCCCcceeeEeeeCCCeee---C-CCCCCHHHHc
Q 019049 70 VPGSDYSGTVDAVGPNVSNFKVGDTV-C----------------GFAALGSFAQFIVADQSELFP---V-PKGCDLLAAA 128 (347)
Q Consensus 70 ~~G~e~~G~V~~vG~~v~~~~~Gd~V-~----------------~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa 128 (347)
.-|.++++-+.+|+++....-.|+.- + |...++.|++++.+.. .+.. + +..+|...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 46889999999999998776666643 2 2223367777777665 2222 3 3334333332
Q ss_pred cCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHH-HHHhcCCcEEEeCCCCCc
Q 019049 129 ALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIK-FLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~-~~~~~g~~~v~~~~~~~~ 206 (347)
.- .+ .+..+.-++++|+|+|+ |.+|..+++.++..| .+|+++.++.++.+ .++++|.. .++.
T Consensus 168 v~--------la-~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~----- 231 (417)
T TIGR01035 168 VE--------LA-ERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF----- 231 (417)
T ss_pred HH--------HH-HHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----
Confidence 10 11 12333357889999999 999999999999999 58999999988755 55667753 2221
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
....+.. .++|+||+|++.
T Consensus 232 ----~~l~~~l--~~aDvVi~aT~s 250 (417)
T TIGR01035 232 ----EDLEEYL--AEADIVISSTGA 250 (417)
T ss_pred ----HHHHHHH--hhCCEEEECCCC
Confidence 1111211 368999999986
No 229
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0051 Score=52.73 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=52.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC-cEEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV-DHVV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~-~~v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
+++++|.|+++++|...++.+...|++|++++++.++.+.+.+ .+. ...+ |..+.+ ..++..... ..+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPE---DVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH---HHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999998876654432 221 2223 222221 233333221 124
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++++++|
T Consensus 78 ~id~lI~~ag 87 (252)
T PRK07677 78 RIDALINNAA 87 (252)
T ss_pred CccEEEECCC
Confidence 6899999887
No 230
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0052 Score=54.37 Aligned_cols=35 Identities=34% Similarity=0.444 Sum_probs=32.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG 183 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~ 183 (347)
.+++++|.|+++++|.++++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999999999999999886
No 231
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.10 E-value=0.0031 Score=54.58 Aligned_cols=81 Identities=28% Similarity=0.482 Sum_probs=55.9
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc------EEEeCCCCCchhhHHHHHHHh
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD------HVVDLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~------~v~~~~~~~~~~~~~~~~~~~ 217 (347)
-.|+.++|+|++.++|.+.+..+...|++|+++.++.++.+.... .+.. .+.|..+.+ ..++....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV---DVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH---HHHHHHHHH
Confidence 368899999999999999999999999999999999987655532 2221 122222222 233333222
Q ss_pred --c-CCcccEEEeCCCc
Q 019049 218 --K-LKGVDVLYDPVGG 231 (347)
Q Consensus 218 --~-~~~~d~v~d~~g~ 231 (347)
. .+++|+.++..|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 1 3579999998884
No 232
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.005 Score=52.84 Aligned_cols=80 Identities=18% Similarity=0.305 Sum_probs=51.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|+++++|..+++.+...|++|++++++.++ .+ .++..+.. ..+ |..+.+ .+....... .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~---~i~~~~~~~~~~ 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA---DLRAAVARTEAE 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHH
Confidence 47799999999999999999999999999999876532 22 22233422 122 222221 133322221 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+.+|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 2568999999884
No 233
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.09 E-value=0.0085 Score=47.72 Aligned_cols=97 Identities=19% Similarity=0.195 Sum_probs=63.9
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGG-VGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~-~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
...|+....+...+.....--.+++|+|.|+ |. +|..++..++..|++|+++.++.++
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~~-------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTKN-------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCchh--------------------
Confidence 4455655555555544433347899999999 65 5999999999999999888875321
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
..+.+ ..+|+||.+++.+.+ --.+.++++-.++.++.+.
T Consensus 81 ---l~~~l-----~~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 81 ---LKEHT-----KQADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred ---HHHHH-----hhCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 11111 367999999998543 2223466666666666443
No 234
>PRK08643 acetoin reductase; Validated
Probab=97.09 E-value=0.0052 Score=52.78 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=52.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-VV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
+++++|.|++|++|..+++.+...|++|++++++.++.+.+.. .+... .+ |..+.+ .+.+..... ..+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD---QVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH---HHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999998876544422 23221 12 222222 123333221 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|+++.++|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 235
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0055 Score=52.14 Aligned_cols=76 Identities=20% Similarity=0.242 Sum_probs=51.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEE--EeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHV--VDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
++++|.|++|++|...+..+...|++|+++++++++.+.+...+. ... .|..+. +.+++..+.... ..|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~-~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH---PGTKAALSQLPF-IPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH---HHHHHHHHhccc-CCCEEEE
Confidence 579999999999999998888899999999999887776654331 122 233332 224444444432 4577666
Q ss_pred CCC
Q 019049 228 PVG 230 (347)
Q Consensus 228 ~~g 230 (347)
++|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 665
No 236
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0052 Score=52.64 Aligned_cols=80 Identities=26% Similarity=0.368 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|++|++|..+++.+...|++|+++++++++.+.+ ++.+.. ..+ |..+. +.+..+.+.. ..
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~i~~~~~~~~~~~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRD---AEVKALVEQTIAAY 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH---HHHHHHHHHHHHHh
Confidence 468999999999999999998888999999999988765433 233422 222 22222 1122222211 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.+.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 468999998874
No 237
>PRK09186 flagellin modification protein A; Provisional
Probab=97.07 E-value=0.0047 Score=52.99 Aligned_cols=79 Identities=27% Similarity=0.350 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc----CCc---E-EEeCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL----GVD---H-VVDLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~----g~~---~-v~~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|.|++|++|...+..+...|++|+++++++++.+.+. ++ +.. . ..|..+.+. +.++.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQES---LEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHH---HHHHHHHHHH
Confidence 5789999999999999999999999999999999887665442 22 211 1 223333222 33332221
Q ss_pred cCCcccEEEeCCC
Q 019049 218 KLKGVDVLYDPVG 230 (347)
Q Consensus 218 ~~~~~d~v~d~~g 230 (347)
..+++|+++++++
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 1246899999885
No 238
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.07 E-value=0.0056 Score=52.68 Aligned_cols=81 Identities=30% Similarity=0.455 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCc-hhhHHHHHHHhcCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESV-IPSVKEFLKARKLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~ 220 (347)
.++++||.|++|++|..+++.+...|++|++++++.++.+... ..+.. ..+ |..+.+. ....+.+.+. ..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~--~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER--FG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH--hC
Confidence 5789999999999999999999889999999999887665443 22322 122 3332211 1111222222 24
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|.++.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 239
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0058 Score=52.45 Aligned_cols=74 Identities=27% Similarity=0.366 Sum_probs=51.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc-EE--EeCCCCCchhhHHHHHHHhcCCcc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD-HV--VDLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
++++||+|++|++|..+++.+...|++|+++++++.+.+.+.+ .+.. .+ .|..+. ..+.... ..++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~------~~~~~~~-~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA------IDRAQAA-EWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH------HHHHHHh-cCCC
Confidence 4689999999999999999999999999999998776554432 2322 11 233222 2222222 2479
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|++|+++|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999987
No 240
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0055 Score=52.77 Aligned_cols=80 Identities=29% Similarity=0.355 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc-----CCc-EEE--eCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL-----GVD-HVV--DLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~-----g~~-~v~--~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|.|+++++|..+++.+...|++|+++++++++.+.+. ++ +.. ..+ |..+.. ......+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA---SVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH---HHHHHHHHHHH
Confidence 4689999999999999999999999999999999887665442 22 211 122 222221 122222211
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
..+.+|++++++|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 12478999999883
No 241
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.06 E-value=0.0056 Score=53.18 Aligned_cols=79 Identities=27% Similarity=0.352 Sum_probs=51.7
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChhhH---HHH-HhcCCcEEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~-~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
+++++||.|+++ ++|.++++.+...|++|+++.++.+.. +.+ ++.|....+ |..+. ++++.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~---~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDI---ASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCH---HHHHHHHHHHHHH
Confidence 578999999976 999999999999999999988765322 222 334533222 32222 2233333322 1
Q ss_pred CCcccEEEeCCC
Q 019049 219 LKGVDVLYDPVG 230 (347)
Q Consensus 219 ~~~~d~v~d~~g 230 (347)
.+.+|++++++|
T Consensus 83 ~g~iD~lVnnAG 94 (271)
T PRK06505 83 WGKLDFVVHAIG 94 (271)
T ss_pred hCCCCEEEECCc
Confidence 257999999987
No 242
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.017 Score=49.13 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++++|+|++|++|...++.+...|++++++.++.. +.+ .++..+.. ..+..+-.+ .+++++..+.. ..+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999888776433 222 22233322 222221111 12233333221 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 243
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0019 Score=55.99 Aligned_cols=78 Identities=23% Similarity=0.388 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
.+++++|.|++|++|..+++.+...|++|++++++.++.+.. .+.. ...|..+.+- ++...+.. ..+.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~---~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDAS---VQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHH---HHHHHHHHHHhCCCCCEE
Confidence 457899999999999999999988999999999987654322 1222 1223333221 22322221 23468999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999984
No 244
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0051 Score=52.88 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cCCc-EEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVD-HVVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.++++||+|++|++|..+++.+...|++|+++++++++.+..++ .+.. ..+..+-.+ .+..+...... ..+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCCC
Confidence 46799999999999999999998999999999988776543333 3322 222222111 11222222211 12478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 245
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0062 Score=52.16 Aligned_cols=81 Identities=19% Similarity=0.318 Sum_probs=52.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|++|++|...++.+...|++|+.++++.++.+.+. +.+.. ..+..+-.+. +..+...+.. ..+.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM-EQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCC
Confidence 4679999999999999999999999999999999877654442 22322 2222221121 1122222221 1236
Q ss_pred ccEEEeCCC
Q 019049 222 VDVLYDPVG 230 (347)
Q Consensus 222 ~d~v~d~~g 230 (347)
+|++++++|
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 899999887
No 246
>PRK08589 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.0063 Score=52.86 Aligned_cols=79 Identities=32% Similarity=0.437 Sum_probs=51.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HH---hcCCc-E--EEeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-LK---SLGVD-H--VVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-~~---~~g~~-~--v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||.|+++++|...++.+...|++|++++++ ++.+. ++ +.+.. . ..|..+... ++...+.. ..
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQ---VKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHHHc
Confidence 57899999999999999999998899999999988 44332 22 22321 1 223333221 33333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|++++++|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 468999998873
No 247
>PRK04148 hypothetical protein; Provisional
Probab=97.05 E-value=0.0087 Score=45.36 Aligned_cols=99 Identities=23% Similarity=0.258 Sum_probs=65.4
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEe-CCCCCchhhHHHHHHHhcCCcccE
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVD-LSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
.-.++.+++++|. | .|...+..+...|.+|++++.++...+.+++.+.+.+.+ .-+.+. ++ -.++|+
T Consensus 13 ~~~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-----~~-----y~~a~l 80 (134)
T PRK04148 13 EKGKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-----EI-----YKNAKL 80 (134)
T ss_pred ccccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-----HH-----HhcCCE
Confidence 3345678999999 7 887677777788999999999999999998888654443 112221 11 247888
Q ss_pred EEeCCCccch-HHHHhccccCCEEEEEeecCCC
Q 019049 225 LYDPVGGKLT-KESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 225 v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
++.+-..+-+ ..++++-+.-|.=+.+-..+++
T Consensus 81 iysirpp~el~~~~~~la~~~~~~~~i~~l~~e 113 (134)
T PRK04148 81 IYSIRPPRDLQPFILELAKKINVPLIIKPLSGE 113 (134)
T ss_pred EEEeCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 8888776444 4455555555544444333333
No 248
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0057 Score=52.27 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=49.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEE--EeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHV--VDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v--~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
.+++++|.|++|++|..+++.+...|++|++++++.. +.+... .+.... .|..+ .+.+.+.. +++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~------~~~~~~~~--~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGK------EESLDKQL--ASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCC------HHHHHHhc--CCCCEE
Confidence 4689999999999999999999999999999998762 222111 111122 23222 12222222 469999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999874
No 249
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.015 Score=49.80 Aligned_cols=39 Identities=31% Similarity=0.330 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKI 187 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~ 187 (347)
.+++++|+|+++++|..+++.+...|++|+++. ++.++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHH
Confidence 468999999999999999999999999998865 444443
No 250
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0077 Score=51.45 Aligned_cols=82 Identities=26% Similarity=0.307 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|+|++|++|..+++.+...|++|++++++.++.+.+. ..+.. ..+..+-.+. ++++...... ..++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP-DSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH-HHHHHHHHHHHHHhCC
Confidence 4678999999999999999999889999999999876544332 22221 1222211111 1122222211 1236
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 251
>PRK05717 oxidoreductase; Validated
Probab=97.04 E-value=0.0065 Score=52.18 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=52.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.|++++|+|++|++|..++..+...|++|++++++.++.+.. +.++.. ..+ |..+. ++..+..+.. ..+.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE---AQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH---HHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999998877655443 344422 122 22222 1122222211 12468
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|+++.++|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998873
No 252
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.04 E-value=0.014 Score=48.24 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.|++|||.|+ |.+|...+..+...|++|+++++... +...+...+.. .+ ....+. . ..-.++|+||-
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i-~~--~~~~~~---~-----~~l~~adlVia 76 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKI-RW--KQKEFE---P-----SDIVDAFLVIA 76 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCE-EE--EecCCC---h-----hhcCCceEEEE
Confidence 5789999999 99999999888889999999976532 22222222211 11 111120 0 01257899999
Q ss_pred CCCccchHHHHhccccCCEEEEE
Q 019049 228 PVGGKLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 228 ~~g~~~~~~~~~~l~~~G~~v~~ 250 (347)
+++++..+..+......+.++.+
T Consensus 77 aT~d~elN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 77 ATNDPRVNEQVKEDLPENALFNV 99 (202)
T ss_pred cCCCHHHHHHHHHHHHhCCcEEE
Confidence 99987665544333344555554
No 253
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.04 E-value=0.006 Score=52.16 Aligned_cols=80 Identities=26% Similarity=0.377 Sum_probs=52.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEEEeC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVLYDP 228 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v~d~ 228 (347)
+++|.|++|++|...+..+...|++|+++++++++.+.+.. ++....+..-+..-.++++...+.. ..+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999999887665543 4432211111111112233333221 12468999998
Q ss_pred CCc
Q 019049 229 VGG 231 (347)
Q Consensus 229 ~g~ 231 (347)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 863
No 254
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.04 E-value=0.0049 Score=53.05 Aligned_cols=79 Identities=27% Similarity=0.398 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH---hcCCcE---EEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK---SLGVDH---VVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++|++|..+++.+...|++|+++++++...+... ..+... ..|..+.+ ......+.. ..+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYA---GAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH---HHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999998754323222 234321 22333321 122222221 124
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
++|++++++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999987
No 255
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0066 Score=51.41 Aligned_cols=82 Identities=22% Similarity=0.275 Sum_probs=52.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC---CcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG---VDHVVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.+.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ++. ..+.+..+-.+. +......+.. ...++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988888999999999887665442 332 122222221111 1122222211 12478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998874
No 256
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.03 E-value=0.0074 Score=51.80 Aligned_cols=80 Identities=26% Similarity=0.418 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|++|++|..++..+...|++|+++.++.++.+.+ ++.+.. ..+ |..+. +......+.. ..
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE---EAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCH---HHHHHHHHHHHHhc
Confidence 578999999999999999998888999999999987755443 233421 122 22222 1223332221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|.++.++|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 468999999884
No 257
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.005 Score=52.07 Aligned_cols=80 Identities=21% Similarity=0.363 Sum_probs=51.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH----HHhcCCcEE-EeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF----LKSLGVDHV-VDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
+++++||+|++|++|..+++.+...|++|++++++.++... .+..+...+ .|..+. ++++...+.. ..++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP---QAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH---HHHHHHHHHHHHHhCC
Confidence 47899999999999999999998889999999997765332 222332221 222221 1233333221 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++.++|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999998873
No 258
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.02 E-value=0.0089 Score=49.48 Aligned_cols=103 Identities=19% Similarity=0.291 Sum_probs=72.9
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCcEEEeCCC-CCchhhHHHHH
Q 019049 142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSN-ESVIPSVKEFL 214 (347)
Q Consensus 142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~-~~~~~~~~~~~ 214 (347)
..++++.+.++||=+|. .+|..++.+|..+. .+++.++.++++.+.++ +.|.+..+.... .+. .+.+.
T Consensus 52 ~~L~~~~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gda---l~~l~ 126 (219)
T COG4122 52 RLLARLSGPKRILEIGT--AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDA---LDVLS 126 (219)
T ss_pred HHHHHhcCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcH---HHHHH
Confidence 34677778899999985 77888888888876 48999999999887775 466555332222 233 33333
Q ss_pred HHhcCCcccEEE-eCCCc---cchHHHHhccccCCEEEEE
Q 019049 215 KARKLKGVDVLY-DPVGG---KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 215 ~~~~~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~~ 250 (347)
+ ...+.||.|| |+.-. ..++.++++|++||.++.=
T Consensus 127 ~-~~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 127 R-LLDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred h-ccCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 3 3356899997 44433 4578899999999999863
No 259
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.01 E-value=0.0073 Score=51.78 Aligned_cols=80 Identities=24% Similarity=0.371 Sum_probs=53.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||+|++|++|..+++.+...|++|++++++.++.+.+. ..+.. ..+ |..+. +..+...... ..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHK---QEVEAAIEHIEKDI 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCH---HHHHHHHHHHHHhc
Confidence 4779999999999999999999999999999999877654432 22322 122 22222 1233333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 468999999873
No 260
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.01 E-value=0.0067 Score=52.82 Aligned_cols=81 Identities=21% Similarity=0.275 Sum_probs=52.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|++|++|...++.+...|++|++++++.++.+.+. ..+.. ..+..+-.+. +.+....+.. ..+.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK-ESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999876554332 22322 1222221111 1133222221 1247
Q ss_pred ccEEEeCCC
Q 019049 222 VDVLYDPVG 230 (347)
Q Consensus 222 ~d~v~d~~g 230 (347)
+|++++++|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 899999987
No 261
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.01 E-value=0.007 Score=52.12 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=51.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhH---HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKI---KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++ +++|.++++.+...|++|+++.++.+.. +.+ ++++....+..+-.+. ++++++.+.. ..+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREP-GQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCH-HHHHHHHHHHHHHcC
Confidence 47899999997 4899999999999999999998875432 222 2344333332222221 2233333322 124
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++++++|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 7899999887
No 262
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.007 Score=51.88 Aligned_cols=76 Identities=28% Similarity=0.445 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
.+++++|.|++|++|..+++.+...|++|++++++.++ ...+.. ..+ |..+. +..++..... ..+.+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDP---DQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCH---HHHHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999999998764 122211 122 22222 1123322221 124689
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
++|.++|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99999873
No 263
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.01 E-value=0.01 Score=47.45 Aligned_cols=99 Identities=21% Similarity=0.398 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~ 217 (347)
...++++|+.++=+|+ +.|...++++... ..+|+++++++++.+.. +++|.+.+....... .+.+.
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A-----p~~L~-- 98 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA-----PEALP-- 98 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc-----hHhhc--
Confidence 4677899998888887 4577788888443 45999999999987766 457866433222211 11221
Q ss_pred cCCcccEEEeCCCc---cchHHHHhccccCCEEEEE
Q 019049 218 KLKGVDVLYDPVGG---KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 218 ~~~~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~ 250 (347)
+...+|.+|---|. ..++.++..|+++|++|.-
T Consensus 99 ~~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 99 DLPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 22368999865543 4578899999999999974
No 264
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.00 E-value=0.0068 Score=52.02 Aligned_cols=79 Identities=24% Similarity=0.329 Sum_probs=51.0
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC--cEEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV--DHVV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~--~~v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++ +++|.++++.+...|++|+++.+++...+.++++.. ...+ |..+. +++++..+.. ..+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD---ESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCH---HHHHHHHHHHHHHhC
Confidence 57899999998 699999999998999999999887433333344321 1122 22221 2233333322 124
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++++++|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 7999999887
No 265
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.99 E-value=0.008 Score=51.70 Aligned_cols=80 Identities=24% Similarity=0.346 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEE-E--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHV-V--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||.|++|++|..+++.+...|++|+++++++++.+.+ ++.+.... + |..+.+ .+....... ..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED---AVNAGIDKVAERF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH---HHHHHHHHHHHHc
Confidence 468999999999999999999999999999999988655433 23343322 1 222222 122222211 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.++|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 468999998874
No 266
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0071 Score=51.62 Aligned_cols=78 Identities=26% Similarity=0.401 Sum_probs=51.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c--CCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L--GVD-HVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~--g~~-~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
+++++|.|++|++|...++.+...|++|+++++++++.+.+.. . +.. +++ |..+. ++.....+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH---DQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH---HHHHHHHHHHHHH
Confidence 5689999999999999998888889999999998876654422 1 211 222 33322 1233322221 2
Q ss_pred CCcccEEEeCCC
Q 019049 219 LKGVDVLYDPVG 230 (347)
Q Consensus 219 ~~~~d~v~d~~g 230 (347)
.+++|+++.++|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 347899999987
No 267
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.98 E-value=0.007 Score=51.40 Aligned_cols=80 Identities=28% Similarity=0.425 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEE---eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVV---DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~---~~~~~~~~~~~~~~~~~~--~~ 219 (347)
+++++||+|++|++|...++.+...|++|+++.+++++.+.. ++.+....+ |..+.. .+....... ..
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA---AVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH---HHHHHHHHHHHHh
Confidence 457899999999999999999988999999999988765433 333432222 333222 122222211 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
..+|.++.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 468999999864
No 268
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.97 E-value=0.0093 Score=48.71 Aligned_cols=99 Identities=22% Similarity=0.205 Sum_probs=61.1
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHhcCCcEE-EeCCCCCchhhHHHHHHHhcCC
Q 019049 144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-G-ATIIAVARGAEKIKFLKSLGVDHV-VDLSNESVIPSVKEFLKARKLK 220 (347)
Q Consensus 144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g-~~V~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
...+.++++||..|+ |.-+ .+..+++.. + .+|++++.++.+ ...++..+ .|..+... ...+.+.+...
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~---~~~l~~~~~~~ 97 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEV---LNKIRERVGDD 97 (188)
T ss_pred hcccCCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhH---HHHHHHHhCCC
Confidence 456789999999998 4434 444444443 3 489999998764 22333322 13322222 33444555666
Q ss_pred cccEEEe-CC----Cc-------------cchHHHHhccccCCEEEEEe
Q 019049 221 GVDVLYD-PV----GG-------------KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 221 ~~d~v~d-~~----g~-------------~~~~~~~~~l~~~G~~v~~g 251 (347)
++|+|+. .. |. ..+..+.+.|+++|+++...
T Consensus 98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 8999995 22 21 23466788999999999753
No 269
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.96 E-value=0.0028 Score=50.15 Aligned_cols=94 Identities=19% Similarity=0.357 Sum_probs=62.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|.|+|++|-+|...++-|...|.+|++++++++|....+..- ++ ..+..+ .....+. -.++|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~---i~---q~Difd-~~~~a~~--l~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT---IL---QKDIFD-LTSLASD--LAGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccce---ee---cccccC-hhhhHhh--hcCCceEEEeccC
Confidence 6899999999999999999999999999999998775432111 11 111111 1111122 2589999998875
Q ss_pred c----------chHHHHhccccCC--EEEEEeecC
Q 019049 232 K----------LTKESLKLLNWGA--QILVIGFAS 254 (347)
Q Consensus 232 ~----------~~~~~~~~l~~~G--~~v~~g~~~ 254 (347)
. ..+.++..++..| |+..+|..+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 2 1233567777744 777776543
No 270
>PRK07985 oxidoreductase; Provisional
Probab=96.96 E-value=0.014 Score=51.28 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=49.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH----HhcCCcE-E--EeCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL----KSLGVDH-V--VDLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~~~~~~-- 217 (347)
.+++++|.|+++++|..+++.+...|++|+++.++. ++.+.+ ++.|... . .|..+. +.+.+..+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE---KFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH---HHHHHHHHHHHH
Confidence 567999999999999999999999999999876542 222222 2334221 1 233322 2233332221
Q ss_pred cCCcccEEEeCCC
Q 019049 218 KLKGVDVLYDPVG 230 (347)
Q Consensus 218 ~~~~~d~v~d~~g 230 (347)
..+++|+++++.|
T Consensus 125 ~~g~id~lv~~Ag 137 (294)
T PRK07985 125 ALGGLDIMALVAG 137 (294)
T ss_pred HhCCCCEEEECCC
Confidence 2357899998876
No 271
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0067 Score=51.85 Aligned_cols=82 Identities=24% Similarity=0.339 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-c--CCc-EEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-L--GVD-HVVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.+++++|.|++|++|..+++.+...|++|+++.++.++.+...+ + +.. ..+..+-.+. +.+++..+.. ..+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSA-EAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCC
Confidence 46799999999999999999888889999999998775544332 2 321 2222221111 1133332221 12478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|+++.++|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 272
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.011 Score=50.32 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=53.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
..+++++|.|++|++|..++..+...|++|+++++++++.+.+. +.+.. .++..+-.+. +......+.. ..+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP-EAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHHHHHHHHcC
Confidence 35679999999999999999999999999999999887654442 22322 1222221111 1122222221 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|+++.++|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 68999999884
No 273
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0047 Score=52.44 Aligned_cols=82 Identities=26% Similarity=0.281 Sum_probs=53.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCC----cEEEeCCCC---CchhhHHHHHHHh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGV----DHVVDLSNE---SVIPSVKEFLKAR 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~----~~v~~~~~~---~~~~~~~~~~~~~ 217 (347)
++++++|.|++|++|...++.+...|++|+++++++++.+.+. +.+. ....|..+. .+....+.+....
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999887655442 2221 111233221 1211122233322
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
...+|+++.++|.
T Consensus 85 -~~~id~vi~~ag~ 97 (239)
T PRK08703 85 -QGKLDGIVHCAGY 97 (239)
T ss_pred -CCCCCEEEEeccc
Confidence 1468999999883
No 274
>PRK08264 short chain dehydrogenase; Validated
Probab=96.95 E-value=0.0076 Score=51.08 Aligned_cols=75 Identities=33% Similarity=0.421 Sum_probs=51.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHhcCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
.+++++|.|++|++|..+++.+...|+ +|+++.++.++.+. .+.. .++ |..+. +.+.+..+.. ..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~---~~~~~~~~~~--~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDP---ASVAAAAEAA--SDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCH---HHHHHHHHhc--CCCCE
Confidence 567999999999999999999999999 99999998765443 2211 122 22222 2234444332 35899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+|.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9998875
No 275
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.95 E-value=0.025 Score=48.57 Aligned_cols=154 Identities=22% Similarity=0.249 Sum_probs=96.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCC-----------CchhhHHHHH
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE-----------SVIPSVKEFL 214 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~-----------~~~~~~~~~~ 214 (347)
+-.++.++++.|. |..|+.++..++..|+-|+..+..+.+.+..+++|+...-..+.+ +|.....+..
T Consensus 160 gtv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 160 GTVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred ccccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 3346678999999 999999999999999999999999999999998886543321111 1111111111
Q ss_pred HHhcCCcccEEEeCCC--c---cc--hHHHHhccccCCEEEEEeecCCCC-C-CcchhHhhhcceEEEEEE-ec-ccccc
Q 019049 215 KARKLKGVDVLYDPVG--G---KL--TKESLKLLNWGAQILVIGFASGEI-P-VIPANIALVKNWTVHGLY-WG-SYKIH 283 (347)
Q Consensus 215 ~~~~~~~~d~v~d~~g--~---~~--~~~~~~~l~~~G~~v~~g~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~-~~~~~ 283 (347)
.. .-.++|+||-|.= + +. ...+...|+|+..+|++..-.+.. . ..+......++.++.|.. +. +....
T Consensus 239 a~-~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~ 317 (356)
T COG3288 239 AE-QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQ 317 (356)
T ss_pred HH-HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhh
Confidence 11 2358999998863 2 22 367899999999999986544321 1 122233456677777643 11 12222
Q ss_pred CchhHHHHHHHHHHHHHc
Q 019049 284 RPHVLEDSLRELLLWAAK 301 (347)
Q Consensus 284 ~~~~~~~~~~~~~~~l~~ 301 (347)
...++..++-.+++++-+
T Consensus 318 aS~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 318 ASQLYATNLVNLLKLLCK 335 (356)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 333445556666665544
No 276
>PRK06484 short chain dehydrogenase; Validated
Probab=96.95 E-value=0.0059 Score=58.39 Aligned_cols=80 Identities=35% Similarity=0.534 Sum_probs=55.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCCcE---EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGVDH---VVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
++++++|+|+++++|..+++.+...|++|++++++.++.+.+ ++++... ..|..+.+ ..++..+.. ..+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEA---QIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH---HHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999999988876655 3455332 22333322 233333221 12478
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++++++|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999999873
No 277
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.94 E-value=0.0086 Score=51.37 Aligned_cols=80 Identities=26% Similarity=0.358 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.++++||+|++|++|..+++.+...|++|+++++++++.+... ..+... .+ |..+.. .+++..+.. ..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE---AINAGIDYAVETF 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH---HHHHHHHHHHHHc
Confidence 4679999999999999999998889999999999887665442 223221 22 222221 233332221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
.++|++|.+++.
T Consensus 80 ~~~d~vi~~a~~ 91 (258)
T PRK12429 80 GGVDILVNNAGI 91 (258)
T ss_pred CCCCEEEECCCC
Confidence 468999998873
No 278
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.94 E-value=0.008 Score=44.27 Aligned_cols=93 Identities=18% Similarity=0.325 Sum_probs=61.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHH-HcCCEEEEEecChhhHHHHHh-c---CC-cEEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGK-VCGATIIAVARGAEKIKFLKS-L---GV-DHVVDLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~-~~g~~V~~~~~~~~~~~~~~~-~---g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
|+.+||-.|+ +.|..+..+++ ..+++|++++.+++-.+.+++ . +. +.+ .....++ .........|
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~d~------~~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRI-TFVQGDA------EFDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEESCC------HGGTTTSSCE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEECcc------ccCcccCCCC
Confidence 6789999998 45888888888 578899999999997777753 2 21 111 1111111 0011124579
Q ss_pred cEEEeCC-Cc----c------chHHHHhccccCCEEEEE
Q 019049 223 DVLYDPV-GG----K------LTKESLKLLNWGAQILVI 250 (347)
Q Consensus 223 d~v~d~~-g~----~------~~~~~~~~l~~~G~~v~~ 250 (347)
|+|+... .. + .++.+.+.|+|+|+++.-
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999876 32 1 256788999999999863
No 279
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0092 Score=52.30 Aligned_cols=37 Identities=32% Similarity=0.494 Sum_probs=32.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~ 184 (347)
-.+++++|.|+++++|...++.+...|++|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 3678999999999999999999988999999887654
No 280
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0066 Score=54.71 Aligned_cols=93 Identities=20% Similarity=0.257 Sum_probs=65.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHhcC--C--cEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLKSLG--V--DHVVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~~~g--~--~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
.+|||.|+ |.+|..+++.+...| .+|++.+++.+++..+.... . ...+|..+. ++..+.. .++|+|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~------~al~~li--~~~d~V 72 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV------DALVALI--KDFDLV 72 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh------HHHHHHH--hcCCEE
Confidence 47999999 999999999988888 79999999999998886653 1 223343332 2333333 345999
Q ss_pred EeCCCccchHHHH-hccccCCEEEEEee
Q 019049 226 YDPVGGKLTKESL-KLLNWGAQILVIGF 252 (347)
Q Consensus 226 ~d~~g~~~~~~~~-~~l~~~G~~v~~g~ 252 (347)
|++.+......++ .+++.+=.++.+..
T Consensus 73 In~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 73 INAAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred EEeCCchhhHHHHHHHHHhCCCEEEccc
Confidence 9999976555555 45555556666543
No 281
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.93 E-value=0.012 Score=50.56 Aligned_cols=81 Identities=22% Similarity=0.323 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.++++||.|+++++|...++.+...|++|+++.++ ++.+.+ .+.+.. ..+..+-.+ .+..+.+.+.. ..+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999887 332222 233422 222222111 12233333221 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 282
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.0067 Score=52.73 Aligned_cols=37 Identities=38% Similarity=0.575 Sum_probs=33.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~ 185 (347)
.+++++|.|++|++|..+++.+...|++|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 4679999999999999999999899999999998654
No 283
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.011 Score=51.37 Aligned_cols=78 Identities=22% Similarity=0.363 Sum_probs=52.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EE--EeCCCCCchhhHHHHHHH--hcCCcccE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HV--VDLSNESVIPSVKEFLKA--RKLKGVDV 224 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v--~~~~~~~~~~~~~~~~~~--~~~~~~d~ 224 (347)
+++||+|++|++|..+++.+...|++|+++.++.++.+.++. .+.. .+ .|..+.+ ++.+.... ....++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA---AVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH---HHHHHHHHHHHHcCCCCE
Confidence 579999999999999999988899999999999887666543 2321 11 2223221 13332221 12346899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+|.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9999874
No 284
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.91 E-value=0.012 Score=50.55 Aligned_cols=79 Identities=24% Similarity=0.472 Sum_probs=53.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
.+++++|.|++|++|..+++.+...|++|++++++.++.+.+. +++.. ..+ |..+.+ ..+...+.. ..+.+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQD---SIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH---HHHHHHHHHHHHcCCC
Confidence 3679999999999999999999999999999999888765554 33322 112 222221 122222221 12468
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|+++.++|
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999876
No 285
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.91 E-value=0.01 Score=50.40 Aligned_cols=82 Identities=23% Similarity=0.333 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|++|++|..++..+...|++|+++++++++.+.. +..+... ++..+-.+. +.+....+.. ..++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY-EEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH-HHHHHHHHHHHHHcCC
Confidence 357899999999999999998889999999999987765443 2223221 222221111 2233333321 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 286
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.90 E-value=0.004 Score=58.91 Aligned_cols=74 Identities=23% Similarity=0.279 Sum_probs=55.1
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
.+.++++|+|.|. |..|++++++++..|++|++.+.++.+.+.+++.|+..+ .... . ...+ ..+|+|
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~-~~~~-~----~~~l------~~~D~V 74 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATV-STSD-A----VQQI------ADYALV 74 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEE-cCcc-h----HhHh------hcCCEE
Confidence 3557899999999 999999999999999999999987776666777787433 2111 1 1111 357999
Q ss_pred EeCCCcc
Q 019049 226 YDPVGGK 232 (347)
Q Consensus 226 ~d~~g~~ 232 (347)
+.+.|-+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9998853
No 287
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.90 E-value=0.011 Score=50.94 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=51.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
+++|+|+++++|...++.+...|++|+++++++++.+.+. +.+..+.+..+-.+. +..+++.+.. ..+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999999999999999999999887654442 223222232222121 2233333221 12478999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999873
No 288
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.90 E-value=0.012 Score=50.42 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=50.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCc-EEEeCCCCCchhhHHHHHHH--hcCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVD-HVVDLSNESVIPSVKEFLKA--RKLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~--~~~~~~d 223 (347)
.+++++|.|++|++|.++++.+...|++|+.++++.. ..+.++..+.. ..+..+-.+ .++.+.+.+. ...+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999998876432 12333334422 112221111 1223333322 1124789
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 289
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.90 E-value=0.0079 Score=51.81 Aligned_cols=81 Identities=21% Similarity=0.262 Sum_probs=62.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----cC---CcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----LG---VDHVVDLSNESVIPSVKEFLKARKLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----~g---~~~v~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
-|++.+|.|++.++|.+-+.-+.+.|.+|+.+.|+.+|++..++ .+ ...++|+.+.+. .-+.+.+.+.+.
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~--~ye~i~~~l~~~ 125 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE--VYEKLLEKLAGL 125 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch--hHHHHHHHhcCC
Confidence 36899999999999998776666699999999999999987742 23 234567766653 246677777777
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+-+.+|++|-
T Consensus 126 ~VgILVNNvG~ 136 (312)
T KOG1014|consen 126 DVGILVNNVGM 136 (312)
T ss_pred ceEEEEecccc
Confidence 78889999984
No 290
>PLN02476 O-methyltransferase
Probab=96.89 E-value=0.01 Score=51.12 Aligned_cols=106 Identities=17% Similarity=0.266 Sum_probs=71.0
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019049 142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
....++.+.++||-+|. .+|..++.+++.+ +.+|+.++.+++..+.++ +.|..+-+.....+..+.+++...
T Consensus 111 ~~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~ 188 (278)
T PLN02476 111 AMLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQ 188 (278)
T ss_pred HHHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh
Confidence 34666778899999996 6688888888876 447999999998776664 456543334334444222333221
Q ss_pred HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049 216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV 249 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 249 (347)
......||.||--... ..++.++++++++|.++.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1123579998855543 356788999999999886
No 291
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.012 Score=51.19 Aligned_cols=83 Identities=28% Similarity=0.291 Sum_probs=52.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
+.++++|+|++|++|..+++.+...|++|++++++.++.+.. +..+....+..-+..-.++..++.... ..+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 346899999999999999998888999999999877654433 223432221111111112233333321 12468
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998874
No 292
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0091 Score=51.49 Aligned_cols=79 Identities=27% Similarity=0.380 Sum_probs=51.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LGVDH-VV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++|++|..+++.+...|++|++++++.+..+..++ .+... .+ |..+. +.++...... ..+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDP---ASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCH---HHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999987653333322 23221 12 22222 1223322211 124
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++|.++|
T Consensus 82 ~id~vi~~ag 91 (263)
T PRK08226 82 RIDILVNNAG 91 (263)
T ss_pred CCCEEEECCC
Confidence 6899999888
No 293
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.87 E-value=0.0082 Score=48.02 Aligned_cols=103 Identities=25% Similarity=0.304 Sum_probs=69.1
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCC--------------chhhHHHHHH
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNES--------------VIPSVKEFLK 215 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~--------------~~~~~~~~~~ 215 (347)
..+|+|.|+ |.+|..++++++.+|++|++.+..+++.+.....++..+....... .......+.+
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 368999999 9999999999999999999999999988888887765443311000 1111223333
Q ss_pred HhcCCcccEEEeCC---Cc--cc--hHHHHhccccCCEEEEEeecCC
Q 019049 216 ARKLKGVDVLYDPV---GG--KL--TKESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 216 ~~~~~~~d~v~d~~---g~--~~--~~~~~~~l~~~G~~v~~g~~~~ 255 (347)
.. ..+|+++.+. +. +. .+..++.|+++..++++....+
T Consensus 99 ~i--~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 99 FI--APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HH--HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HH--hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 33 3578888532 22 22 3778899999999999876543
No 294
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.87 E-value=0.005 Score=52.88 Aligned_cols=95 Identities=25% Similarity=0.403 Sum_probs=71.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.+|.|+|+ |.+|.-++.+|.-+|++|+..+.+.+|++.+.. ++.. +++-++. ..+.+.. .+.|++|.+
T Consensus 169 ~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~-------~~iee~v--~~aDlvIga 238 (371)
T COG0686 169 AKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP-------SNIEEAV--KKADLVIGA 238 (371)
T ss_pred ccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH-------HHHHHHh--hhccEEEEE
Confidence 47888899 999999999999999999999999999998875 4443 3332222 2222222 467888875
Q ss_pred C---Cc--c--chHHHHhccccCCEEEEEeecCC
Q 019049 229 V---GG--K--LTKESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 229 ~---g~--~--~~~~~~~~l~~~G~~v~~g~~~~ 255 (347)
+ |. + ..++.+..|+|++.++++....+
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 4 32 2 35788999999999999987765
No 295
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.011 Score=51.46 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=52.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC-cEEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV-DHVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~-~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
+++|+|.|++|++|..+++.+...|++|++++++.++.+.+.+ .+. ...+..+-.+ .+++....... ..+++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999999888889999999998887665543 221 1222221111 11222222211 12478999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
+.++|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999884
No 296
>PRK12743 oxidoreductase; Provisional
Probab=96.87 E-value=0.01 Score=50.97 Aligned_cols=79 Identities=28% Similarity=0.318 Sum_probs=49.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHH----HHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKF----LKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~----~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
+++++|.|+++++|..+++.+...|++|+++.+ +.++.+. ++..|.. +.+ |..+.. .++...+.. ..
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLP---EGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHH---HHHHHHHHHHHHc
Confidence 468999999999999999999999999988754 3333322 2334532 222 222221 122222221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.++|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 468999998874
No 297
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.013 Score=50.48 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC---cEEE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV---DHVV--DLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~---~~v~--~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
+++++|+|++|++|..++..+...|++|++++++.++.+...+ +.. ...+ |..+. +.+.+..+.. ..+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA---DALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH---HHHHHHHHHHHHhCCC
Confidence 4689999999999999999998899999999998887655432 221 1122 22221 1233322221 1235
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 298
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.01 Score=51.42 Aligned_cols=79 Identities=20% Similarity=0.197 Sum_probs=51.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
+++|.|++|++|...+..+...|++|++++++.++.+.+ +..+... .+..+-.+ .+......+.. ..+++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 799999999999999998888999999999988765543 2233222 22121111 11233333221 1247899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+|.++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
No 299
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.87 E-value=0.045 Score=45.12 Aligned_cols=79 Identities=20% Similarity=0.239 Sum_probs=56.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.|++|+|+|. |.+|..+++.+...|++|++++.+.++.+.+.+ +|+.. ++.. ++ ....+|+++-
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~--~l-----------~~~~~Dv~vp 91 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE--EI-----------YSVDADVFAP 91 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch--hh-----------ccccCCEEEe
Confidence 5789999999 999999999999999999999999887776654 46532 2221 11 1136899986
Q ss_pred CCCcc-chHHHHhccc
Q 019049 228 PVGGK-LTKESLKLLN 242 (347)
Q Consensus 228 ~~g~~-~~~~~~~~l~ 242 (347)
|+... .....+..++
T Consensus 92 ~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 92 CALGGVINDDTIPQLK 107 (200)
T ss_pred cccccccCHHHHHHcC
Confidence 65543 3344555554
No 300
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.87 E-value=0.012 Score=49.85 Aligned_cols=79 Identities=19% Similarity=0.260 Sum_probs=51.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcE-EEeCCCCCchhhHHHHHHHhc--CCcccEE
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDH-VVDLSNESVIPSVKEFLKARK--LKGVDVL 225 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~~--~~~~d~v 225 (347)
++++||.|+++++|..+++.+...|++|+++++++++. +.++..|+.. ..|..+.+ .++...+... .+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA---GIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH---HHHHHHHHHHhhCCCccEE
Confidence 46899999999999999999999999999999876532 3334455321 12222221 1333332221 2468999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998873
No 301
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.86 E-value=0.0099 Score=50.72 Aligned_cols=82 Identities=24% Similarity=0.281 Sum_probs=51.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|++|.+|...+..+...|++|++++++.++.... +..+.. .++..+-.+ .+.++...... ....
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 467999999999999999998888999999999986654332 223322 122111111 12233332211 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|.++.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 302
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.86 E-value=0.013 Score=51.05 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=52.1
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecChh---hHHHH-HhcCCcEE--EeCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHV--VDLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~-~~~g~~~v--~~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|+|++ +++|.++++.+...|++|+++.++.+ +.+.+ ++++.... .|..+.+ +++.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~---~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE---HFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH---HHHHHHHHHHHH
Confidence 47899999996 69999999999999999999988742 33333 34453322 2333322 233333322 1
Q ss_pred CCcccEEEeCCC
Q 019049 219 LKGVDVLYDPVG 230 (347)
Q Consensus 219 ~~~~d~v~d~~g 230 (347)
.+.+|++++++|
T Consensus 81 ~g~iDilVnnAG 92 (274)
T PRK08415 81 LGKIDFIVHSVA 92 (274)
T ss_pred cCCCCEEEECCc
Confidence 357999999987
No 303
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.84 E-value=0.015 Score=49.38 Aligned_cols=82 Identities=30% Similarity=0.396 Sum_probs=53.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
++++++|.|++|++|..++..+...|+.|+...++.++.+.+. .++.. .++..+ ..-.++++...... ..+++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN-LSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc-CCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999999999999999999889999998888777665543 33422 122221 11112233332211 1247899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.++|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999874
No 304
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.84 E-value=0.015 Score=50.22 Aligned_cols=111 Identities=20% Similarity=0.181 Sum_probs=74.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh---cC--CcEEEeCCCC-CchhhHHHHHHHhcCCc
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS---LG--VDHVVDLSNE-SVIPSVKEFLKARKLKG 221 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~---~g--~~~v~~~~~~-~~~~~~~~~~~~~~~~~ 221 (347)
.+++.|+|+|+.+++|..++.-+...|.+|++.+..++-.+.++. .+ -...+|..++ +..+..+.+...++..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 467789999999999999999999999999999977765555532 12 1223444433 33333444445567777
Q ss_pred ccEEEeCCCcc---------------------------chHHHHhcccc-CCEEEEEeecCCCCC
Q 019049 222 VDVLYDPVGGK---------------------------LTKESLKLLNW-GAQILVIGFASGEIP 258 (347)
Q Consensus 222 ~d~v~d~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~~~ 258 (347)
.-.++|++|.. .....+-++++ .||+|.++...+..+
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVA 171 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCcc
Confidence 88899999821 11222334554 499999987766443
No 305
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.01 Score=51.59 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=36.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
+++++||.|++|++|..+++.+...|++|++++++.++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 46899999999999999999999999999999998765443
No 306
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.83 E-value=0.0081 Score=52.64 Aligned_cols=144 Identities=13% Similarity=0.129 Sum_probs=81.5
Q ss_pred CCCCCEEEEecCCCcceeeEeeeCCCeeeCCCCCCHHHHccCcchHHHHHHHHHHh-cCCCCCCEEEEecCCchHHHHHH
Q 019049 89 FKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHR-AQLSSGQVLLVLGAAGGVGVAAV 167 (347)
Q Consensus 89 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~-~~~~~~~~VlI~g~~g~~G~~~~ 167 (347)
+.+|++.+-.. .|.++...+....+.+.+++.|-.+. ...|.. ++... ....++++||-.|+ |. |.+++
T Consensus 106 ~~~g~~~~i~p---~w~~~~~~~~~~~i~ldpg~aFgtG~----h~tt~l-~l~~l~~~~~~g~~VLDvGc-Gs-G~lai 175 (288)
T TIGR00406 106 VQFGKRFWICP---SWRDVPSDEDALIIMLDPGLAFGTGT----HPTTSL-CLEWLEDLDLKDKNVIDVGC-GS-GILSI 175 (288)
T ss_pred EEEcCeEEEEC---CCcCCCCCCCcEEEEECCCCcccCCC----CHHHHH-HHHHHHhhcCCCCEEEEeCC-Ch-hHHHH
Confidence 56677555442 34333222334566677776554421 112222 22111 12457899999998 54 77776
Q ss_pred HHHHHcCC-EEEEEecChhhHHHHHhc----CCcE-EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc----cchHHH
Q 019049 168 QIGKVCGA-TIIAVARGAEKIKFLKSL----GVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG----KLTKES 237 (347)
Q Consensus 168 ~la~~~g~-~V~~~~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~----~~~~~~ 237 (347)
.+++ .|+ +|++++.++...+.+++. +... +..... +. .. .....||+|+..... ..+..+
T Consensus 176 ~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~-------~~-~~~~~fDlVvan~~~~~l~~ll~~~ 245 (288)
T TIGR00406 176 AALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YL-------EQ-PIEGKADVIVANILAEVIKELYPQF 245 (288)
T ss_pred HHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-cc-------cc-ccCCCceEEEEecCHHHHHHHHHHH
Confidence 6665 566 899999998877766542 2111 111110 00 00 113579999865543 234667
Q ss_pred HhccccCCEEEEEee
Q 019049 238 LKLLNWGAQILVIGF 252 (347)
Q Consensus 238 ~~~l~~~G~~v~~g~ 252 (347)
.+.|+++|.++..|.
T Consensus 246 ~~~LkpgG~li~sgi 260 (288)
T TIGR00406 246 SRLVKPGGWLILSGI 260 (288)
T ss_pred HHHcCCCcEEEEEeC
Confidence 899999999998663
No 307
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.83 E-value=0.0031 Score=52.04 Aligned_cols=105 Identities=16% Similarity=0.285 Sum_probs=69.7
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA 216 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~ 216 (347)
...+..+.++||-+|. .+|+.++.+++.+ +.+|+.++.++++.+.++ ..|...-+.....+..+.+.++...
T Consensus 39 ~l~~~~~~k~vLEIGt--~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~ 116 (205)
T PF01596_consen 39 MLVRLTRPKRVLEIGT--FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELAND 116 (205)
T ss_dssp HHHHHHT-SEEEEEST--TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHT
T ss_pred HHHHhcCCceEEEecc--ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhc
Confidence 4455567789999995 6788888888876 579999999999877774 3554333333334442223333332
Q ss_pred hcCCcccEEE-eCCCc---cchHHHHhccccCCEEEE
Q 019049 217 RKLKGVDVLY-DPVGG---KLTKESLKLLNWGAQILV 249 (347)
Q Consensus 217 ~~~~~~d~v~-d~~g~---~~~~~~~~~l~~~G~~v~ 249 (347)
...+.||.|| |+.-. ..+..++.+++++|.++.
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~ 153 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIA 153 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEE
Confidence 2235799997 44433 346778899999999886
No 308
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.82 E-value=0.012 Score=50.71 Aligned_cols=81 Identities=20% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCC--cEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGV--DHVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~--~~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++||.|++|++|...+..+...|++|+.++++..+.+... + .+. ...+..+-.+ .+.+....... ..+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 568999999999999999999889999999998876554332 1 221 1222222111 12233333222 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 309
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.82 E-value=0.012 Score=50.82 Aligned_cols=82 Identities=15% Similarity=0.184 Sum_probs=49.9
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|+ ++++|.+.++.+...|++|+++.+++...+.++ +.|....+..+-.+ .++++.+.+.. ..+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 5789999996 579999999999999999998765432222222 23432222222212 12233333221 135
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999999873
No 310
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.82 E-value=0.015 Score=49.65 Aligned_cols=81 Identities=23% Similarity=0.265 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
+++++||.|++|++|..+++.+...|++|++++++.++.+.+. +.+.. .++..+-.+ .++++...+.. ...+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999998887655442 22322 222222111 12233333221 1246
Q ss_pred ccEEEeCCC
Q 019049 222 VDVLYDPVG 230 (347)
Q Consensus 222 ~d~v~d~~g 230 (347)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 311
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.81 E-value=0.013 Score=50.63 Aligned_cols=79 Identities=24% Similarity=0.379 Sum_probs=50.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChh---hHHHH-HhcCCcEE--EeCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE---KIKFL-KSLGVDHV--VDLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~-~~~g~~~v--~~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|+++ ++|.++++.+...|++|+.+.+++. ..+.+ ++.|.... .|..+.+ ++++..+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~---~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK---SISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH---HHHHHHHHHHHH
Confidence 578999999986 8999999988889999998887642 12222 23353332 2333322 233333322 1
Q ss_pred CCcccEEEeCCC
Q 019049 219 LKGVDVLYDPVG 230 (347)
Q Consensus 219 ~~~~d~v~d~~g 230 (347)
.+.+|++++++|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 247999999876
No 312
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.81 E-value=0.0097 Score=51.27 Aligned_cols=79 Identities=19% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh------hhHHHHHhcCC-cEE--EeCCCCCchhhHHHHHHHh
Q 019049 149 SGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA------EKIKFLKSLGV-DHV--VDLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 149 ~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~------~~~~~~~~~g~-~~v--~~~~~~~~~~~~~~~~~~~ 217 (347)
.+++++|.|++ +++|.+++..+...|++|+++.++. +..+.+++.+. ... .|..+. +++++..+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDD---AQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCH---HHHHHHHHHH
Confidence 47899999985 7999999999999999998875432 22233332221 112 233222 2233333222
Q ss_pred --cCCcccEEEeCCC
Q 019049 218 --KLKGVDVLYDPVG 230 (347)
Q Consensus 218 --~~~~~d~v~d~~g 230 (347)
..+.+|++++++|
T Consensus 82 ~~~~g~iD~lv~nag 96 (258)
T PRK07370 82 KQKWGKLDILVHCLA 96 (258)
T ss_pred HHHcCCCCEEEEccc
Confidence 1247999999987
No 313
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.81 E-value=0.013 Score=50.57 Aligned_cols=82 Identities=22% Similarity=0.272 Sum_probs=53.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|.|+++++|..++..+...|++|+++.+++++.+.+. ..|... .+..+-.+ .++++...... ..+.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCCC
Confidence 5679999999999999999888889999999998887654432 334322 22222111 12223333221 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++.++|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 314
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.80 E-value=0.013 Score=50.35 Aligned_cols=80 Identities=24% Similarity=0.428 Sum_probs=52.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|+++++|..++..+...|++|++++++.++.+.+. ..+.. .++ |..+. +++.+..... ..
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~---~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE---QELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH---HHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999998877654432 23322 122 22222 1122222211 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.++|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 468999999873
No 315
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.77 E-value=0.036 Score=46.21 Aligned_cols=97 Identities=22% Similarity=0.326 Sum_probs=65.8
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHh----cCCcE--EEeCCCCCchhhHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLKS----LGVDH--VVDLSNESVIPSVKEFL 214 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~~ 214 (347)
....++++++||-+|+ +.|..++.+++..+ .+|++++.+++-.+.+++ .|... +...+....
T Consensus 70 ~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~-------- 139 (212)
T PRK13942 70 ELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG-------- 139 (212)
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC--------
Confidence 5677899999999997 56777888887765 599999999886665543 44322 222111110
Q ss_pred HHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049 215 KARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 215 ~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 250 (347)
......||.|+-+... .....+.+.|+++|+++..
T Consensus 140 -~~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 140 -YEENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred -CCcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 0123579999765543 4446788999999998875
No 316
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.015 Score=50.59 Aligned_cols=80 Identities=26% Similarity=0.388 Sum_probs=52.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCC---cEEE--eCCCCCchhhHHHHHHH-hc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGV---DHVV--DLSNESVIPSVKEFLKA-RK 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~---~~v~--~~~~~~~~~~~~~~~~~-~~ 218 (347)
.++++||.|++|++|...+..+...|++|++++++.++.+...+ .+. ..++ |..+.+ ..+.+.+. ..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~~~~~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN---SIHNFQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH---HHHHHHHHHHh
Confidence 35789999999999999999988899999999998776554422 221 1222 333222 12222111 12
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+++|+++.++|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 2478999999874
No 317
>PLN02253 xanthoxin dehydrogenase
Probab=96.75 E-value=0.011 Score=51.42 Aligned_cols=80 Identities=26% Similarity=0.318 Sum_probs=52.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC---cEE--EeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV---DHV--VDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~---~~v--~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++|++|..+++.+...|++|+++++++++.+.+ .+++. ... .|..+.+. +++..+.. ..+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDD---VSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHH---HHHHHHHHHHHhC
Confidence 467999999999999999998888999999999877654433 23321 111 23333221 22222211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 318
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.75 E-value=0.015 Score=51.54 Aligned_cols=99 Identities=21% Similarity=0.351 Sum_probs=68.1
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA 216 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~ 216 (347)
+...++++++||..|+ | .|..++.+++..+. +|++++.+++..+.++ ..|.+.+..... +. .+..
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~---~~~~--- 144 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DG---YYGV--- 144 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Ch---hhcc---
Confidence 4567889999999998 5 69999999988764 6999999988665554 356543332211 21 1100
Q ss_pred hcCCcccEEEeCCCccc-hHHHHhccccCCEEEEE
Q 019049 217 RKLKGVDVLYDPVGGKL-TKESLKLLNWGAQILVI 250 (347)
Q Consensus 217 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~ 250 (347)
.....||+|+.+.+.+. ...+++.|+++|+++..
T Consensus 145 ~~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 145 PEFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred cccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 11246999998877543 35678999999998874
No 319
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.016 Score=48.70 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=52.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEE-EeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHV-VDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
+++|.|++|++|...++.+...|++|+++.++.++.+.+. +++...+ .|..+. +.+++..+... ..+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~---~~v~~~~~~~~-~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP---ASLEEARGLFP-HHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH---HHHHHHHHHHh-hcCcEEEECC
Confidence 5899999999999999999889999999999888766553 4443322 233322 22444444332 2689999886
Q ss_pred C
Q 019049 230 G 230 (347)
Q Consensus 230 g 230 (347)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 5
No 320
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.013 Score=50.36 Aligned_cols=82 Identities=17% Similarity=0.293 Sum_probs=51.2
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecCh--hhHHHH-HhcCCc-EEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARGA--EKIKFL-KSLGVD-HVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~~--~~~~~~-~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|+ ++++|.++++.+...|++|++++++. +..+.+ ++++.. ..+..+-.+ .++++++.+.. ..+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 5689999998 79999999999989999999988653 323333 334321 122221111 12233333322 135
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 85 ~iD~li~nAG~ 95 (256)
T PRK07889 85 GLDGVVHSIGF 95 (256)
T ss_pred CCcEEEEcccc
Confidence 79999998873
No 321
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.71 E-value=0.018 Score=50.96 Aligned_cols=83 Identities=25% Similarity=0.314 Sum_probs=51.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHH----HHhcCCcEEEeCCCCCchhhHHHHHHHh-cCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKF----LKSLGVDHVVDLSNESVIPSVKEFLKAR-KLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~ 222 (347)
.+++++|.|+++++|...++.+...|++|++.+++. ++.+. ++..|........+..-.+....+.+.. ..+.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999987643 22222 2333433222222222122233333221 13579
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++++++|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999874
No 322
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.69 E-value=0.028 Score=51.71 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
.+++|+|+|+ |++|.+++..+...|+ +++++.++.++.+.+. +++...+.. .....+.. ..+|+||
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---------~~~l~~~l--~~aDiVI 247 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---------LSELPQLI--KKADIII 247 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---------HHHHHHHh--ccCCEEE
Confidence 5789999999 9999999999999997 7999999988766554 455222221 12222222 4689999
Q ss_pred eCCCccc
Q 019049 227 DPVGGKL 233 (347)
Q Consensus 227 d~~g~~~ 233 (347)
+|++.+.
T Consensus 248 ~aT~a~~ 254 (414)
T PRK13940 248 AAVNVLE 254 (414)
T ss_pred ECcCCCC
Confidence 9999753
No 323
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.69 E-value=0.016 Score=49.93 Aligned_cols=86 Identities=24% Similarity=0.292 Sum_probs=59.7
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcE-E--EeCCCCCc--hhhHHHHHHHhc-
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDH-V--VDLSNESV--IPSVKEFLKARK- 218 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~-v--~~~~~~~~--~~~~~~~~~~~~- 218 (347)
+.++..+|+|.|++.++|++.+..++..|++|+++.++..++..++ +++-.. + +.+...+. .++++...+.+.
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 3455679999999999999999999999999999999999988875 344111 1 11211111 223444444332
Q ss_pred -CCcccEEEeCCCc
Q 019049 219 -LKGVDVLYDPVGG 231 (347)
Q Consensus 219 -~~~~d~v~d~~g~ 231 (347)
.+.+|.+|+|+|.
T Consensus 109 ~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGV 122 (331)
T ss_pred ccCCcceEEEecCc
Confidence 2468999999995
No 324
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.019 Score=48.82 Aligned_cols=79 Identities=23% Similarity=0.299 Sum_probs=50.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----c-CCc-EEEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----L-GVD-HVVDLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~-g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
++++|.|++|++|...++.+...|++|+++++++++.+...+ . +.. .++..+-.+. +..++...... ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~-~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT-ASHAAFLDSLP-ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh-HHHHHHHHHHh-hcCCE
Confidence 589999999999999999998899999999998876544321 1 111 1222111111 22344443332 25699
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.++|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988763
No 325
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.027 Score=48.74 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=68.1
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
..+||+....+..+....---.|++|+|.|.+..+|.-++.++...|++|+++.+... +
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~-------------------~-- 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK-------------------D-- 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-------------------h--
Confidence 3466666666655533321237899999999666999999999999999998876321 1
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+.+.+ ..+|++|.++|.+.+-. -++++++..++.+|...
T Consensus 195 --l~~~~-----~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 --MASYL-----KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred --HHHHH-----hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence 11111 46799999999865421 15688988888887653
No 326
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.67 E-value=0.009 Score=51.25 Aligned_cols=81 Identities=22% Similarity=0.310 Sum_probs=53.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHhcCCc--EEEeCCCCC-chhhHHHHHHHhcCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI----KFLKSLGVD--HVVDLSNES-VIPSVKEFLKARKLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~~~~g~~--~v~~~~~~~-~~~~~~~~~~~~~~~~ 221 (347)
.|+.|||+|+++|+|.+.++-...+|+++.+.+.+.+-. +.++..|.. .+.|.++.+ ...-.+++.+.. +.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~--G~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV--GD 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc--CC
Confidence 588999999999999999988888999988888776533 333444522 333444332 222233333333 47
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++|.+|-
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999883
No 327
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.67 E-value=0.02 Score=49.54 Aligned_cols=88 Identities=26% Similarity=0.302 Sum_probs=59.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcE----EEeCCCCCchhhHHHHHHHhcCC-c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDH----VVDLSNESVIPSVKEFLKARKLK-G 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~----v~~~~~~~~~~~~~~~~~~~~~~-~ 221 (347)
++++++|.|+ ||.+.+++..+...|+ +++++.|+.+|.+.+.+ ++... .....+.. .. .
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~-------------~~~~ 190 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLE-------------GLEE 190 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccc-------------cccc
Confidence 5799999999 9999999999999996 89999999998777653 44211 11111111 12 5
Q ss_pred ccEEEeCCCccchH------HHHhccccCCEEEEE
Q 019049 222 VDVLYDPVGGKLTK------ESLKLLNWGAQILVI 250 (347)
Q Consensus 222 ~d~v~d~~g~~~~~------~~~~~l~~~G~~v~~ 250 (347)
+|+++||++-.... .-.+++++.-.+.++
T Consensus 191 ~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~ 225 (283)
T COG0169 191 ADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDV 225 (283)
T ss_pred cCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEe
Confidence 89999999842111 014556666666554
No 328
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.67 E-value=0.02 Score=49.47 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=49.9
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecChh---hHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARGAE---KIKFLK-SLGVDHVVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~~~---~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|+++ ++|.++++.+...|++|+++.+++. ..+.+. +.+....+..+-.+ .+.++.+.... ..+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhcC
Confidence 578999999975 8999999999889999998887632 222222 22322222221111 12233333322 134
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
.+|++++++|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6899999987
No 329
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.67 E-value=0.019 Score=48.81 Aligned_cols=80 Identities=30% Similarity=0.434 Sum_probs=49.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|++|++|..++..+...|++|+++.++..+ .+. ++..+... .+ |..+.+ .+.+..+.. .
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE---SVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH---HHHHHHHHHHHH
Confidence 45799999999999999999999999999877776542 221 22233222 22 222221 233333221 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
..++|.++.++|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 2468999998874
No 330
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.66 E-value=0.025 Score=49.32 Aligned_cols=91 Identities=25% Similarity=0.361 Sum_probs=60.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
.+++++|.|+ |++|.+++..+...| .+|+++.++.++.+.+. +++....+.. ..+. . ..-..+|+|+
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~-----~~~~~~DivI 190 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----Q-----EELADFDLII 190 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----h-----hccccCCEEE
Confidence 5679999999 999999999999999 59999999998876664 3432110111 0010 0 0124689999
Q ss_pred eCCCccch------HHHHhccccCCEEEEE
Q 019049 227 DPVGGKLT------KESLKLLNWGAQILVI 250 (347)
Q Consensus 227 d~~g~~~~------~~~~~~l~~~G~~v~~ 250 (347)
+|++.... ......+++...++++
T Consensus 191 naTp~g~~~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 191 NATSAGMSGELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred ECCcCCCCCCCCCCCCCHHHcCCCCEEEEe
Confidence 99985332 1234566776666665
No 331
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.66 E-value=0.0075 Score=53.22 Aligned_cols=82 Identities=28% Similarity=0.366 Sum_probs=55.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cC----CcEEE-eCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LG----VDHVV-DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g----~~~v~-~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+.+++|+|+++|+|..++..+...|++|+.++++.++.+.+++ +. ...+. -.-+..-.+++..+.+.. ...
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 56799999999999999999999999999999999877665532 22 11111 111222222233333322 356
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
..|+.++.+|
T Consensus 114 ~ldvLInNAG 123 (314)
T KOG1208|consen 114 PLDVLINNAG 123 (314)
T ss_pred CccEEEeCcc
Confidence 7899999888
No 332
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.017 Score=49.34 Aligned_cols=83 Identities=24% Similarity=0.294 Sum_probs=50.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
++++++|.|++|++|..++..+...|++|++. .++.++.+.+ ++.+....+-.-+..-.+.+....+.. ..+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999998764 5555544332 334433222111111112233332221 1246
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 333
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.65 E-value=0.023 Score=50.51 Aligned_cols=79 Identities=24% Similarity=0.318 Sum_probs=52.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcC---Cc-EE--EeCCCCCchhhHHHHHHHh--cC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLG---VD-HV--VDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~v--~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
+++++|.|+++++|..+++.+...| ++|++++++.++.+.+. +++ .. .+ .|..+. +.++...... ..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL---DSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCH---HHHHHHHHHHHHhC
Confidence 5689999999999999999888899 89999999887665443 332 11 11 233222 1233333322 13
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|++++++|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
No 334
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.65 E-value=0.0089 Score=49.50 Aligned_cols=107 Identities=20% Similarity=0.274 Sum_probs=67.3
Q ss_pred chHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHH----HhcCCcEE-EeCCCC
Q 019049 132 VAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFL----KSLGVDHV-VDLSNE 204 (347)
Q Consensus 132 ~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~----~~~g~~~v-~~~~~~ 204 (347)
.+...|. +.+...+++|++||-+|+ +.|+.++-+++..|. +|+.++..++-.+.+ +++|...+ +...+.
T Consensus 57 ~P~~~a~--~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg 132 (209)
T PF01135_consen 57 APSMVAR--MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG 132 (209)
T ss_dssp -HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G
T ss_pred HHHHHHH--HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch
Confidence 3444444 236777999999999996 568888888888775 699999888744444 34564422 111111
Q ss_pred CchhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEE
Q 019049 205 SVIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVI 250 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~ 250 (347)
.. .......||.|+-+.+-+.. ...++.|+++|+++..
T Consensus 133 ~~--------g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 133 SE--------GWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp GG--------TTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred hh--------ccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 10 00123579999988876555 5678999999999985
No 335
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.013 Score=49.37 Aligned_cols=75 Identities=27% Similarity=0.323 Sum_probs=49.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHH-HhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLK-ARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~-~~~~~~~d~v~ 226 (347)
.+++++|.|++|++|...++.+...|++|+++.++.++ .... ....|..+... .+...+ .....++|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~---~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQ---TAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHH---HHHHHHHHHHhCCCcEEE
Confidence 36789999999999999999999999999999987654 1111 12223333221 222222 22223689999
Q ss_pred eCCCc
Q 019049 227 DPVGG 231 (347)
Q Consensus 227 d~~g~ 231 (347)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 336
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.64 E-value=0.019 Score=52.70 Aligned_cols=75 Identities=21% Similarity=0.291 Sum_probs=50.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCC-cEEE--eCCCCCchhhHHHHHHHhcCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGV-DHVV--DLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~-~~v~--~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
.+++++|.||+|++|.+.+..+...|++|+++++++++.+... ..+. ...+ |..+ .+.+.+.. +++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd------~~~v~~~l--~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ------EAALAELL--EKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC------HHHHHHHh--CCCCE
Confidence 4789999999999999999988889999999998876553321 1111 1122 2222 22233322 46999
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+++++|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9998773
No 337
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.64 E-value=0.012 Score=52.20 Aligned_cols=89 Identities=25% Similarity=0.277 Sum_probs=62.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.+|.|+|+ |.+|...+..++..|. +|++.++++++.+.+++.|...... .+ ..+.. ...|+|+.|
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~----~~~~~-----~~aDvViia 73 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS----AAEAV-----KGADLVILC 73 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC----HHHHh-----cCCCEEEEC
Confidence 58999998 9999999999888884 8999999998888888877532111 11 11111 368999999
Q ss_pred CCccch----HHHHhccccCCEEEEEee
Q 019049 229 VGGKLT----KESLKLLNWGAQILVIGF 252 (347)
Q Consensus 229 ~g~~~~----~~~~~~l~~~G~~v~~g~ 252 (347)
++.... ......++++..++.++.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 986433 334456677776666543
No 338
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.013 Score=50.45 Aligned_cols=76 Identities=32% Similarity=0.476 Sum_probs=49.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
.++++||.|++|++|...++.+...|++|++++++..+. . ..... ...|..+.+ ..+.+.... ..+++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~-~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L-PEGVEFVAADLTTAE---GCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c-CCceeEEecCCCCHH---HHHHHHHHHHHHcCCCCEE
Confidence 478999999999999999999988999999999876531 1 11111 112333222 122222211 12468999
Q ss_pred EeCCC
Q 019049 226 YDPVG 230 (347)
Q Consensus 226 ~d~~g 230 (347)
++++|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99987
No 339
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.63 E-value=0.035 Score=50.05 Aligned_cols=83 Identities=22% Similarity=0.237 Sum_probs=51.0
Q ss_pred CCCCEEEEecCCchHHHH--HHHHHHHcCCEEEEEecChh--h--------------HHHHHhcCCc-EEEeCCCCCchh
Q 019049 148 SSGQVLLVLGAAGGVGVA--AVQIGKVCGATIIAVARGAE--K--------------IKFLKSLGVD-HVVDLSNESVIP 208 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~--~~~la~~~g~~V~~~~~~~~--~--------------~~~~~~~g~~-~v~~~~~~~~~~ 208 (347)
..++++||.|+++++|++ .++.+ ..|++++++....+ + .+.+++.|.. ..+..+-.+ .+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss-~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS-DE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC-HH
Confidence 456899999999999999 56677 88999888874221 1 2234455643 223322222 12
Q ss_pred hHHHHHHHh--cCCcccEEEeCCCcc
Q 019049 209 SVKEFLKAR--KLKGVDVLYDPVGGK 232 (347)
Q Consensus 209 ~~~~~~~~~--~~~~~d~v~d~~g~~ 232 (347)
..+++.+.. ..+++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 233333322 135799999999864
No 340
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.02 Score=50.30 Aligned_cols=36 Identities=31% Similarity=0.388 Sum_probs=32.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~ 184 (347)
.++++||.|++|++|..++..+...|++|+++.++.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~ 80 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE 80 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 478999999999999999998888999999988764
No 341
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.62 E-value=0.022 Score=49.54 Aligned_cols=82 Identities=18% Similarity=0.278 Sum_probs=51.9
Q ss_pred CCCCEEEEecCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHh--cC
Q 019049 148 SSGQVLLVLGAA--GGVGVAAVQIGKVCGATIIAVARGA---EKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 148 ~~~~~VlI~g~~--g~~G~~~~~la~~~g~~V~~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
-.++++||.|++ +++|.+.++.+...|++|+++.+++ ++.+.+ ++++....+..+-.+ .++.+++.+.. ..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHHhc
Confidence 357899999996 7999999999999999999887653 233333 344532222222111 22234433322 23
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+.+|++++++|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 47899999886
No 342
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.62 E-value=0.02 Score=49.32 Aligned_cols=81 Identities=21% Similarity=0.276 Sum_probs=49.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----H-hcCCc-EEEeCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----K-SLGVD-HVVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~-~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+++++|.|+++++|..++..+...|++|+++.+ +.++.+.. + +.+.. ..+..+-.+. +++++..... ..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP-ETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHhc
Confidence 5789999999999999999999999999988764 34433322 1 12322 2222221111 2233333322 12
Q ss_pred CcccEEEeCCC
Q 019049 220 KGVDVLYDPVG 230 (347)
Q Consensus 220 ~~~d~v~d~~g 230 (347)
+.+|++++++|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 47899999885
No 343
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.022 Score=48.86 Aligned_cols=81 Identities=27% Similarity=0.294 Sum_probs=51.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcC--CcEEEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLG--VDHVVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g--~~~v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
+++++|+|++|++|...+..+...|++|++++++.++.+.+. ++. ....+..+-.+. +++....... ..+++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDA-ASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 568999999999999999988889999999999887665443 222 112222221111 1122222211 1246899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999874
No 344
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.59 E-value=0.032 Score=46.25 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=65.3
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCc---EEEeCCCCCchhhHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVD---HVVDLSNESVIPSVKEF 213 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~~ 213 (347)
+...++++++||-.|+ |.|..++.+++..+ .+|++++.+++-.+.++ +.|.. .++..+.... .
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~--- 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L--- 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence 5667889999999997 45777777787764 58999999988665554 34432 2222221111 0
Q ss_pred HHHhcCCcccEEEeCCCcc-chHHHHhccccCCEEEEE
Q 019049 214 LKARKLKGVDVLYDPVGGK-LTKESLKLLNWGAQILVI 250 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~ 250 (347)
.....||.|+-+.... ..+.+.+.|+++|+++..
T Consensus 138 ---~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 138 ---EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ---ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1125799998776543 346788999999999764
No 345
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.58 E-value=0.026 Score=48.29 Aligned_cols=79 Identities=25% Similarity=0.422 Sum_probs=51.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcE-E--EeCCCCCchhhHHHHHHHh--cCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDH-V--VDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++||.|++|++|..++..+...|++|++++++.++.+.+.. .+... . .|..+.+ .++...... ...
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED---EIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH---HHHHHHHHHHHhcC
Confidence 3589999999999999999988899999999998876655432 23221 1 2333221 122222211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
+.|++|.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 68999988763
No 346
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.02 Score=48.04 Aligned_cols=77 Identities=21% Similarity=0.226 Sum_probs=50.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
++++|.|++|.+|..++..+... ++|++++++.++.+.+.+ .....++..+-.+. +.+++..... .+.|.++.++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP-EAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH-HHHHHHHHhc--CCCCEEEECC
Confidence 58999999999999998877766 999999998877655543 22122222222221 2233333322 3699999998
Q ss_pred Cc
Q 019049 230 GG 231 (347)
Q Consensus 230 g~ 231 (347)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 74
No 347
>PRK06398 aldose dehydrogenase; Validated
Probab=96.58 E-value=0.013 Score=50.52 Aligned_cols=75 Identities=28% Similarity=0.350 Sum_probs=49.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
.++++||+|+++++|..++..+...|++|++++++..+.. ... ...|..+.. ++++..+.. ..+.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~---~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKE---QVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHH---HHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999999999999999999998765321 111 112333322 123332221 12468999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998873
No 348
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.57 E-value=0.02 Score=48.71 Aligned_cols=82 Identities=26% Similarity=0.359 Sum_probs=50.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
++++||.|++|++|..++..+...|++|+++ .++.++.+.+. ..+....+...+..-.+.++...... ..+++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 5689999999999999998888889999998 88776554332 22222111111111112233333221 12368
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
No 349
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.54 E-value=0.024 Score=48.58 Aligned_cols=78 Identities=21% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhc--CCcEE-EeCCCCCchhhHHHHHHHhcCCcccE
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSL--GVDHV-VDLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~--g~~~v-~~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
..+.+|+|+|++|.+|..+++.+...|++|+++.+++++....... ++..+ .|..+. ...+.+.. +.++|+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~l~~~~-~~~~d~ 88 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG-----SDKLVEAI-GDDSDA 88 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC-----HHHHHHHh-hcCCCE
Confidence 3467999999999999999988888899999999988765433221 22211 233321 12222322 136899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
+|.+.|.
T Consensus 89 vi~~~g~ 95 (251)
T PLN00141 89 VICATGF 95 (251)
T ss_pred EEECCCC
Confidence 9988774
No 350
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.52 E-value=0.016 Score=49.39 Aligned_cols=83 Identities=27% Similarity=0.358 Sum_probs=49.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhH-HHH---HhcCCcEEEeCCCCCchhhHHHHHHHh--cCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKI-KFL---KSLGVDHVVDLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~-~~~---~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
.+++++|+|++|++|..+++.+...|++|++... +..+. +.+ +..+.......-+..-.+.+.+..... ..++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999999887543 22222 222 334543322111111111122222211 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 8999999884
No 351
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.52 E-value=0.17 Score=44.98 Aligned_cols=143 Identities=9% Similarity=0.034 Sum_probs=77.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-----------cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-----------LGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-----------~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
-++|.|+|+ |.+|...++.+...|.+|++.+.+++..+.++. .|...-.....-.+....+ +.
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~---~a-- 80 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIE---AC-- 80 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHH---HH--
Confidence 468999999 999999999999999999999999876544321 2210000000000100011 11
Q ss_pred CCcccEEEeCCCcc------chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEEEEeccccccCc-------
Q 019049 219 LKGVDVLYDPVGGK------LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRP------- 285 (347)
Q Consensus 219 ~~~~d~v~d~~g~~------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 285 (347)
-.++|+|++++... .+..+-+.++++. ++.. .++............+.-.+.+.++.+..+.-|
T Consensus 81 v~~aDlViEavpE~l~vK~~lf~~l~~~~~~~a-IlaS--nTS~l~~s~la~~~~~p~R~~g~HffnP~~~~pLVEVv~g 157 (321)
T PRK07066 81 VADADFIQESAPEREALKLELHERISRAAKPDA-IIAS--STSGLLPTDFYARATHPERCVVGHPFNPVYLLPLVEVLGG 157 (321)
T ss_pred hcCCCEEEECCcCCHHHHHHHHHHHHHhCCCCe-EEEE--CCCccCHHHHHHhcCCcccEEEEecCCccccCceEEEeCC
Confidence 15789999999863 3444556666654 3332 222221111122223345566666655443222
Q ss_pred -hhHHHHHHHHHHHHHc
Q 019049 286 -HVLEDSLRELLLWAAK 301 (347)
Q Consensus 286 -~~~~~~~~~~~~~l~~ 301 (347)
....+.++.+.+++.+
T Consensus 158 ~~T~~e~~~~~~~f~~~ 174 (321)
T PRK07066 158 ERTAPEAVDAAMGIYRA 174 (321)
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 1224666666666655
No 352
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.50 E-value=0.036 Score=47.40 Aligned_cols=78 Identities=24% Similarity=0.296 Sum_probs=50.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcE-EE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDH-VV--DLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
++++|.|++|++|...++.+...|++|+++.++.++.+.+ ...+... .+ |..+.+ .+.+..... ....
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~---~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD---QVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHHcCC
Confidence 4799999999999999999999999999999887654433 2234221 12 222222 233332221 1236
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|+++.++|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 353
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.50 E-value=0.03 Score=48.05 Aligned_cols=80 Identities=29% Similarity=0.350 Sum_probs=51.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcccE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGVDV 224 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~d~ 224 (347)
.+++++|.|++|++|..+++.+...|++|+++.++. +..+.++..+... ..|..+.. .+++..... ..+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~---~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRD---QVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999998876543 3334444334321 12333322 133333221 1247899
Q ss_pred EEeCCCc
Q 019049 225 LYDPVGG 231 (347)
Q Consensus 225 v~d~~g~ 231 (347)
++.++|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999874
No 354
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.49 E-value=0.028 Score=47.61 Aligned_cols=107 Identities=16% Similarity=0.219 Sum_probs=67.3
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049 142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
....++.+.++||-.|. +.|..++.+++.+ +.+|+.++.+++..+.+++ .|...-+.....+..+....+..
T Consensus 61 ~~l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~ 138 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLN 138 (234)
T ss_pred HHHHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHh
Confidence 34667778889999986 5566666677665 3599999999987776643 45432223233333111222211
Q ss_pred HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049 216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 250 (347)
......||+||--... ..+..++++++++|.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1113579999855432 3567889999999988763
No 355
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=96.48 E-value=0.15 Score=42.09 Aligned_cols=79 Identities=22% Similarity=0.365 Sum_probs=53.9
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC----cEE-E-eCC---CCCchhhHHHHHHHhcCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV----DHV-V-DLS---NESVIPSVKEFLKARKLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~----~~v-~-~~~---~~~~~~~~~~~~~~~~~~ 220 (347)
|+++++.|+.|++|+.....+-..|+++.++..+.|+.+...++.+ ..+ + .++ ..+..+..+++... -+
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~--fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT--FG 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH--hC
Confidence 8899999999999999999999999999999988887766655442 111 1 111 11222222333322 35
Q ss_pred cccEEEeCCC
Q 019049 221 GVDVLYDPVG 230 (347)
Q Consensus 221 ~~d~v~d~~g 230 (347)
..|+.+|-+|
T Consensus 83 ~iDIlINgAG 92 (261)
T KOG4169|consen 83 TIDILINGAG 92 (261)
T ss_pred ceEEEEcccc
Confidence 6899999888
No 356
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.46 E-value=0.069 Score=44.48 Aligned_cols=101 Identities=21% Similarity=0.284 Sum_probs=61.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE---------eCCCCCchhhHHHHHHHh
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV---------DLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~---------~~~~~~~~~~~~~~~~~~ 217 (347)
.++.+||+.|+ |.|.-++-+|. .|.+|++++.++.-.+.+. +.|..... .....++ ....+....
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~D~~~~~ 107 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEI--FCGDFFALT 107 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEE--EEccCCCCC
Confidence 57779999998 46777777764 7999999999999777653 33321000 0000000 000011111
Q ss_pred --cCCcccEEEeCCCc---------cchHHHHhccccCCEEEEEeec
Q 019049 218 --KLKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 218 --~~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g~~ 253 (347)
....||.++|+..- ..+..+.++|+|+|+++++...
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 12468999997541 2456788999999987777543
No 357
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.46 E-value=0.019 Score=49.50 Aligned_cols=80 Identities=20% Similarity=0.366 Sum_probs=50.1
Q ss_pred CCCEEEEecC--CchHHHHHHHHHHHcCCEEEEEecC---hhhHHHH-HhcCCcEEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGA--AGGVGVAAVQIGKVCGATIIAVARG---AEKIKFL-KSLGVDHVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~--~g~~G~~~~~la~~~g~~V~~~~~~---~~~~~~~-~~~g~~~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|+ ++++|.++++.+...|++|+++.+. .++.+.+ ++++....+ |..+.+ +++...+.. .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~---~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE---QIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH---HHHHHHHHHHHH
Confidence 4789999996 5799999999998899999887543 3333333 334532222 333222 233333322 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+.+|++++++|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 2579999998863
No 358
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.047 Score=47.50 Aligned_cols=78 Identities=18% Similarity=0.238 Sum_probs=56.6
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
-.|++|+|.|.++.+|...+.++...|++|++..+.... +. +.+ ..+|++++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~-----------------------L~---~~~--~~aDIvI~ 208 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQN-----------------------LP---ELV--KQADIIVG 208 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchh-----------------------HH---HHh--ccCCEEEE
Confidence 478899999995559999999999999988877652111 11 111 47899999
Q ss_pred CCCccchHHHHhccccCCEEEEEeecC
Q 019049 228 PVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 228 ~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
++|.+.+ --.++++++-.++.++...
T Consensus 209 AtG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 209 AVGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred ccCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 9986543 2236789998998888553
No 359
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.42 E-value=0.062 Score=40.15 Aligned_cols=98 Identities=21% Similarity=0.415 Sum_probs=65.6
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH----hcCCc--EEEeCCCCCchhhHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK----SLGVD--HVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~~~~ 215 (347)
....+.++++|+-.|+ |. |..+..+++..+ .+|++++.++...+.++ .++.. .++..+.... ..
T Consensus 13 ~~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-------~~ 83 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA-------LE 83 (124)
T ss_pred HHcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc-------Ch
Confidence 4556777889999998 44 888999998874 59999999988777664 24432 2222111110 00
Q ss_pred HhcCCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049 216 ARKLKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 250 (347)
. ....+|+|+...+. ..++.+.+.|+++|+++..
T Consensus 84 ~-~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 84 D-SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred h-hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 0 12479999876543 2467889999999999874
No 360
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.42 E-value=0.047 Score=42.86 Aligned_cols=92 Identities=26% Similarity=0.324 Sum_probs=60.2
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHH-HhcCCcE-EEeCCCCCchhhHHHHHHHhcCCcccE
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFL-KSLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDV 224 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~ 224 (347)
..+.+++|.|+ |.+|...++.+...| .+|++.+++.++.+.+ ++++... ..... +. .+. -.++|+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~~----~~~-----~~~~Dv 84 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--DL----EEL-----LAEADL 84 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--ch----hhc-----cccCCE
Confidence 45689999999 999999999988886 6899999988876654 4455321 01111 11 111 257899
Q ss_pred EEeCCCccch-----HHHHhccccCCEEEEEe
Q 019049 225 LYDPVGGKLT-----KESLKLLNWGAQILVIG 251 (347)
Q Consensus 225 v~d~~g~~~~-----~~~~~~l~~~G~~v~~g 251 (347)
++.|++.... ......++++..++.++
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~ 116 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVV 116 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcC
Confidence 9999987442 11223456666666664
No 361
>PRK05855 short chain dehydrogenase; Validated
Probab=96.40 E-value=0.03 Score=54.19 Aligned_cols=80 Identities=21% Similarity=0.290 Sum_probs=54.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh--cC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
.+.++||+||+|++|..+++.+...|++|++++++.++.+.+. +.|.. .++ |..+.+ +.+++.... ..
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~---~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD---AMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHhc
Confidence 4579999999999999999999999999999999887665442 23432 122 222222 233333321 13
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|++++++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 468999999884
No 362
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.40 E-value=0.021 Score=48.75 Aligned_cols=43 Identities=35% Similarity=0.496 Sum_probs=37.2
Q ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 147 LSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 147 ~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
..++++++|.|++|++|...++.+...|++|++++++.++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~ 51 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA 51 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH
Confidence 4478899999999999999998888889999999998775433
No 363
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.39 E-value=0.022 Score=51.43 Aligned_cols=76 Identities=17% Similarity=0.127 Sum_probs=49.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcC--Cc-EEE--eCCCCCchhhHHHHHHHhcCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLG--VD-HVV--DLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g--~~-~v~--~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
.+++|||.|++|.+|..+++.+...|++|++++++....... ..++ .. ..+ |..+ .+.+.......++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~------~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD------AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC------HHHHHHHHhhcCC
Confidence 467999999999999999999999999999998766543222 1221 11 111 2222 2223333333368
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|+|+.+++
T Consensus 77 d~vih~A~ 84 (349)
T TIGR02622 77 EIVFHLAA 84 (349)
T ss_pred CEEEECCc
Confidence 99999987
No 364
>PLN03139 formate dehydrogenase; Provisional
Probab=96.38 E-value=0.051 Score=49.40 Aligned_cols=88 Identities=20% Similarity=0.211 Sum_probs=63.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|.|+|. |.+|...++.++.+|.+|++.+++....+..++.|+..+ .+ .+++. ...|+|+.+
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell-----~~sDvV~l~ 262 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----ED----LDAML-----PKCDVVVIN 262 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CC----HHHHH-----hhCCEEEEe
Confidence 5789999999 999999999999999999999887544444445554321 11 33333 346999888
Q ss_pred CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049 229 VGG-K----LT-KESLKLLNWGAQILVIG 251 (347)
Q Consensus 229 ~g~-~----~~-~~~~~~l~~~G~~v~~g 251 (347)
+.. + .+ ...+..|+++..++.++
T Consensus 263 lPlt~~T~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 263 TPLTEKTRGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred CCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence 774 1 22 46789999999888765
No 365
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.036 Score=47.31 Aligned_cols=104 Identities=25% Similarity=0.325 Sum_probs=62.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhH----HHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKI----KFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~----~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.++++||.|++|++|...++.+...|++|+.+.++. ++. ..+++.+.. ..+ |..+.+ .+....+.. .
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE---GCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH---HHHHHHHHHHHH
Confidence 367999999999999999998889999988776532 222 222334432 122 222221 122222211 1
Q ss_pred CCcccEEEeCCCc----c----c------------------hHHHHhccccCCEEEEEeecCC
Q 019049 219 LKGVDVLYDPVGG----K----L------------------TKESLKLLNWGAQILVIGFASG 255 (347)
Q Consensus 219 ~~~~d~v~d~~g~----~----~------------------~~~~~~~l~~~G~~v~~g~~~~ 255 (347)
..++|.+|.++|. + . .+.+...++..|+++.++....
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 2478999999873 0 0 1223445567789999876543
No 366
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.38 E-value=0.046 Score=47.73 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=37.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK 191 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~ 191 (347)
.+++|+|.|+ |+.|.+++..+...|+ +|++++++.+|.+.+.
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5679999999 9999999999999998 8999999988876654
No 367
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.38 E-value=0.034 Score=47.49 Aligned_cols=75 Identities=27% Similarity=0.336 Sum_probs=49.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
+++++||.|++|++|...+..+...|++|++++++. ....+.. ..+ |..+. +..++..+.. ..+.+|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDA---AAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCH---HHHHHHHHHHHHHcCCCC
Confidence 568999999999999999999989999999999875 2222211 112 22222 2233333221 124689
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
+++.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99999874
No 368
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.37 E-value=0.047 Score=45.50 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=58.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
++.+|||+|| |.++.-=+..+...|++|++++..-. ....+...|.-... ...+. ... -.++++||-
T Consensus 24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~---~r~~~---~~d-----l~g~~LVia 91 (223)
T PRK05562 24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLI---KGNYD---KEF-----IKDKHLIVI 91 (223)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEE---eCCCC---hHH-----hCCCcEEEE
Confidence 5779999999 99998878888889999999986542 23223333322222 22231 111 147899999
Q ss_pred CCCccchHH-HHhccccCCEEEEEe
Q 019049 228 PVGGKLTKE-SLKLLNWGAQILVIG 251 (347)
Q Consensus 228 ~~g~~~~~~-~~~~l~~~G~~v~~g 251 (347)
|++++.++. +....+..|.++.+.
T Consensus 92 ATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 999876654 455555657666654
No 369
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.03 Score=47.65 Aligned_cols=35 Identities=26% Similarity=0.340 Sum_probs=31.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~ 186 (347)
+++|.|++|++|..+++.+...|++|++++++.++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP 37 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence 79999999999999999988899999999887653
No 370
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.37 E-value=0.041 Score=44.54 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=32.2
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL 190 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~ 190 (347)
+|.|+|+ |.+|...++++...|++|...+.+++.++.+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence 5899999 9999999999998999999999999876555
No 371
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.36 E-value=0.03 Score=47.94 Aligned_cols=78 Identities=24% Similarity=0.379 Sum_probs=48.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++|.|++|++|..++..+...|++|++++++.. +.+ .++..+.. .++ |..+.. ....+.+.. ..+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 79 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLS---AHEAMLDAAQAAWG 79 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHH---HHHHHHHHHHHhcC
Confidence 57999999999999999999999999999987543 221 12223322 122 333221 123333222 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|+++.+.|.
T Consensus 80 ~id~vi~~ag~ 90 (256)
T PRK12745 80 RIDCLVNNAGV 90 (256)
T ss_pred CCCEEEECCcc
Confidence 68999999874
No 372
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.34 E-value=0.024 Score=45.03 Aligned_cols=86 Identities=22% Similarity=0.190 Sum_probs=57.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
.+|.++|. |.+|...++-+...|++|++.++++++.+.+.+.|+...- + ..+..+ ..|+|+-|+.
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~-----s----~~e~~~-----~~dvvi~~v~ 66 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVAD-----S----PAEAAE-----QADVVILCVP 66 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEES-----S----HHHHHH-----HBSEEEE-SS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhh-----h----hhhHhh-----cccceEeecc
Confidence 37889999 9999999999999999999999999999988888843321 1 233332 3488888877
Q ss_pred c-cchHH------HHhccccCCEEEEEe
Q 019049 231 G-KLTKE------SLKLLNWGAQILVIG 251 (347)
Q Consensus 231 ~-~~~~~------~~~~l~~~G~~v~~g 251 (347)
+ +.... ++..++++..++.++
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g~iiid~s 94 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPGKIIIDMS 94 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TTEEEEE-S
T ss_pred cchhhhhhhhhhHHhhccccceEEEecC
Confidence 6 32222 445566666776654
No 373
>PRK12746 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.053 Score=46.38 Aligned_cols=39 Identities=31% Similarity=0.354 Sum_probs=32.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKI 187 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~ 187 (347)
.+++++|.|++|++|..+++.+...|++|++. .++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 35799999999999999999998899998775 5665544
No 374
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.34 E-value=0.061 Score=45.28 Aligned_cols=103 Identities=20% Similarity=0.305 Sum_probs=70.9
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCCcE--EEeCCCCCchhhHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDH--VVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~~~~ 215 (347)
...+..+|++||=+|+ |.|-.+..+++..|- +|++++.+++-++.+++ .|... .+..+...+ -
T Consensus 45 ~~~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~L-------P- 114 (238)
T COG2226 45 SLLGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENL-------P- 114 (238)
T ss_pred HhhCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhC-------C-
Confidence 4455668999988775 678888999988874 89999999997777754 23221 111111111 0
Q ss_pred HhcCCcccEEEeCCCc-------cchHHHHhccccCCEEEEEeecCCC
Q 019049 216 ARKLKGVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGFASGE 256 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~~~~~ 256 (347)
.....||++..+.|= ..++++.+.|+|+|+++.+......
T Consensus 115 -f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~ 161 (238)
T COG2226 115 -FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD 161 (238)
T ss_pred -CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence 234578988777662 3578899999999999998766543
No 375
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.34 E-value=0.023 Score=49.64 Aligned_cols=86 Identities=17% Similarity=0.155 Sum_probs=58.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|.|+|. |.+|...+..++..|.+|++.++++++.+.+.+.|...... .+ .+ . -...|+||.|+..
T Consensus 2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~---~~----~~-~-----~~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEAS---TD----LS-L-----LKDCDLVILALPI 67 (279)
T ss_pred eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccccc---CC----Hh-H-----hcCCCEEEEcCCH
Confidence 6889998 99999998888888999999999998888888877422111 11 11 1 1467999999886
Q ss_pred cch----HHHHhccccCCEEEEEe
Q 019049 232 KLT----KESLKLLNWGAQILVIG 251 (347)
Q Consensus 232 ~~~----~~~~~~l~~~G~~v~~g 251 (347)
... ..+...++++-.+..++
T Consensus 68 ~~~~~~~~~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 68 GLLLPPSEQLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHHhCCCCcEEEeCc
Confidence 433 33444555554454443
No 376
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.32 E-value=0.035 Score=50.97 Aligned_cols=106 Identities=25% Similarity=0.287 Sum_probs=64.2
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH-------HHHhc-CCcEE-EeCCCCCchhhHHHHHH
Q 019049 145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK-------FLKSL-GVDHV-VDLSNESVIPSVKEFLK 215 (347)
Q Consensus 145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~-------~~~~~-g~~~v-~~~~~~~~~~~~~~~~~ 215 (347)
.+...+.+|||.|++|.+|..+++.+...|++|++++++..+.+ ..... +...+ .|..+.+. +....+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~---l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADS---LRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHH---HHHHHH
Confidence 34456779999999999999999999889999999998765321 11112 22222 23333221 333333
Q ss_pred HhcCCcccEEEeCCCccc-------------hHHHHhccccC--CEEEEEeecC
Q 019049 216 ARKLKGVDVLYDPVGGKL-------------TKESLKLLNWG--AQILVIGFAS 254 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~~~-------------~~~~~~~l~~~--G~~v~~g~~~ 254 (347)
.. +.++|+||+|.+... ...+++.++.. +++|.++...
T Consensus 132 ~~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 132 SE-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred Hh-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 21 126999999886410 12344444443 4788876543
No 377
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=96.31 E-value=0.05 Score=46.28 Aligned_cols=105 Identities=15% Similarity=0.235 Sum_probs=69.2
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKA 216 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~ 216 (347)
...+..+.++||-+|. .+|+.++.+++.+ +.+|+.++.+++..+.++ +.|...-+.....+..+.+.++...
T Consensus 73 ~l~~~~~ak~iLEiGT--~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~ 150 (247)
T PLN02589 73 MLLKLINAKNTMEIGV--YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIED 150 (247)
T ss_pred HHHHHhCCCEEEEEeC--hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhc
Confidence 4556667789999985 7788888888876 569999999998766663 4564333444444442222222211
Q ss_pred h-cCCcccEEEeCCCc----cchHHHHhccccCCEEEE
Q 019049 217 R-KLKGVDVLYDPVGG----KLTKESLKLLNWGAQILV 249 (347)
Q Consensus 217 ~-~~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~ 249 (347)
. ..+.||.||--+.. ..+..++++++++|.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 1 12579999854443 356788999999999875
No 378
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=96.30 E-value=0.043 Score=46.71 Aligned_cols=82 Identities=23% Similarity=0.311 Sum_probs=49.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
.+++++|.|++|++|..++..+...|++|+++.+ ++++.+.. +..+... .+..+-.+ .+.+....+.. ..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999999999999999988889999887654 33433322 2233222 22222111 11222222221 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|+++.++|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 379
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.29 E-value=0.033 Score=46.85 Aligned_cols=80 Identities=20% Similarity=0.339 Sum_probs=61.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh--cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS--LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
+++|.|+ |.+|...++.+...|..|++++.++++.+...+ +.. +++..+.. -...++..+-..+|+++-++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t-----~~~~L~~agi~~aD~vva~t 74 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDAT-----DEDVLEEAGIDDADAVVAAT 74 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCC-----CHHHHHhcCCCcCCEEEEee
Confidence 6899999 999999999999999999999999998877433 443 34433332 24566667778999999999
Q ss_pred CccchHHHH
Q 019049 230 GGKLTKESL 238 (347)
Q Consensus 230 g~~~~~~~~ 238 (347)
|....+..+
T Consensus 75 ~~d~~N~i~ 83 (225)
T COG0569 75 GNDEVNSVL 83 (225)
T ss_pred CCCHHHHHH
Confidence 986554433
No 380
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.28 E-value=0.047 Score=47.00 Aligned_cols=80 Identities=23% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHH----HHhcCCc-EE--EeCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKF----LKSLGVD-HV--VDLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~----~~~~g~~-~v--~~~~~~~~~~~~~~~~~~~--~ 218 (347)
.+++++|.|++|++|..+++.+...|++|+++.++.. ..+. ++..+.. .. .|..+.. ++.+..+.. .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~---~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVES---DVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHH---HHHHHHHHHHHH
Confidence 5789999999999999999999999999988877432 2222 2223422 11 2333222 133332211 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+.+|+++.++|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 2468999998874
No 381
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.047 Score=46.91 Aligned_cols=80 Identities=21% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--c
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--K 218 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~ 218 (347)
.++++||.|++|++|..+++.+...|++|+++.+. .++.+.+ +..+.. ..+ |..+.. .+.+..... .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~~~~~~ 84 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEA---EVRALVARASAA 84 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH---HHHHHHHHHHHH
Confidence 46799999999999999999998999999887654 3333322 222432 122 322221 233333221 1
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+++|+++.++|.
T Consensus 85 ~~~iD~vi~~ag~ 97 (258)
T PRK09134 85 LGPITLLVNNASL 97 (258)
T ss_pred cCCCCEEEECCcC
Confidence 2478999999873
No 382
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.26 E-value=0.059 Score=45.98 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=48.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-HhcCCc-EEE--eCCCCCc-hhhHHHHHHHhcCCcc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KSLGVD-HVV--DLSNESV-IPSVKEFLKARKLKGV 222 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~~g~~-~v~--~~~~~~~-~~~~~~~~~~~~~~~~ 222 (347)
.+++++|+|++|++|..++..+...|++|+.+.+ +.++.+.+ .+++.. .++ |..+.+- ....+.+.+.. +.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHF-GKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 3578999999999999999999999999987654 34443333 234321 122 2222111 11122222222 3348
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|+++.++|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999875
No 383
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.25 E-value=0.1 Score=38.60 Aligned_cols=91 Identities=19% Similarity=0.271 Sum_probs=63.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 232 (347)
|+|.|. |.+|...++.++..+.+|++++.++++.+.+++.|.. ++..+..+ ...++..+-..++.++-+++++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~-----~~~l~~a~i~~a~~vv~~~~~d 73 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATD-----PEVLERAGIEKADAVVILTDDD 73 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTS-----HHHHHHTTGGCESEEEEESSSH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchh-----hhHHhhcCccccCEEEEccCCH
Confidence 678899 9999999999999666999999999999999998854 44444332 2444555566889999888874
Q ss_pred chH----HHHhccccCCEEEEE
Q 019049 233 LTK----ESLKLLNWGAQILVI 250 (347)
Q Consensus 233 ~~~----~~~~~l~~~G~~v~~ 250 (347)
... ..++.+.+..+++..
T Consensus 74 ~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 74 EENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCeEEEE
Confidence 332 233445555666543
No 384
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.04 Score=47.29 Aligned_cols=80 Identities=21% Similarity=0.342 Sum_probs=48.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA----EKIKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~----~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~ 217 (347)
.+++++|.|++|++|..+++.+...|++|++++++. ++.+. ++..+... .+ |..+ .+.+++.....
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~---~~~~~~~~~~~ 83 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT---AAAVEKLFDDA 83 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC---HHHHHHHHHHH
Confidence 467999999999999999999998999977765432 22221 22234321 12 2222 12233333321
Q ss_pred --cCCcccEEEeCCCc
Q 019049 218 --KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 --~~~~~d~v~d~~g~ 231 (347)
..+++|++++++|.
T Consensus 84 ~~~~~~id~li~~ag~ 99 (257)
T PRK12744 84 KAAFGRPDIAINTVGK 99 (257)
T ss_pred HHhhCCCCEEEECCcc
Confidence 12478999999884
No 385
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.22 E-value=0.026 Score=43.74 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=69.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHH----HhcCCcccEEE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLK----ARKLKGVDVLY 226 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~----~~~~~~~d~v~ 226 (347)
.+|+|+|+-|.+|.++++..+..++-|.-++.++... + -..++...+.+|.++.+.+++ .+.+.++|.||
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~--A----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--A----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--c----cceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 4899999999999999999999999988888765422 1 113444556677666555554 45688999999
Q ss_pred eCCCc-----c----ch------------------HHHHhccccCCEEEEEeec
Q 019049 227 DPVGG-----K----LT------------------KESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 227 d~~g~-----~----~~------------------~~~~~~l~~~G~~v~~g~~ 253 (347)
+.+|+ . .+ ..+-..|+++|.+.+.|..
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 98774 1 00 1123589999999988754
No 386
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.20 E-value=0.1 Score=43.52 Aligned_cols=98 Identities=21% Similarity=0.345 Sum_probs=64.6
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcE--EEeCCCCCchhhHHHH
Q 019049 142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDH--VVDLSNESVIPSVKEF 213 (347)
Q Consensus 142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~--v~~~~~~~~~~~~~~~ 213 (347)
.....++++++||-.|+ |.|..++.+++..+. +|++++.+++-.+.++ +.|.+. ++..+....
T Consensus 70 ~~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~------- 140 (215)
T TIGR00080 70 TELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG------- 140 (215)
T ss_pred HHHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC-------
Confidence 35667899999999997 567777778877653 7999999988666654 344322 121111110
Q ss_pred HHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049 214 LKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 250 (347)
......||+|+-+... .....+.+.|+++|+++..
T Consensus 141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred --CcccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 0112479988855443 4456788999999998864
No 387
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.046 Score=46.36 Aligned_cols=37 Identities=38% Similarity=0.445 Sum_probs=31.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~ 185 (347)
+.++|||.|++|.+|..+++.+...|++|+++.++..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~ 41 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 3569999999999999999999999999887666544
No 388
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.20 E-value=0.019 Score=41.79 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=57.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|||+|+ |.+|..-++.+...|++|++++... +..+ +... .....+. ..-.++++|+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~--~~i~---~~~~~~~---------~~l~~~~lV~~a 67 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE--GLIQ---LIRREFE---------EDLDGADLVFAA 67 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH--TSCE---EEESS-G---------GGCTTESEEEE-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh--hHHH---HHhhhHH---------HHHhhheEEEec
Confidence 5789999999 9999999999999999999999875 1122 2111 1122221 113579999999
Q ss_pred CCccch-HHHHhccccCCEEEEEee
Q 019049 229 VGGKLT-KESLKLLNWGAQILVIGF 252 (347)
Q Consensus 229 ~g~~~~-~~~~~~l~~~G~~v~~g~ 252 (347)
++++.+ ..+....+..|..+.+..
T Consensus 68 t~d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 68 TDDPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred CCCHHHHHHHHHHHhhCCEEEEECC
Confidence 998665 456667777888887743
No 389
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.19 E-value=0.062 Score=45.48 Aligned_cols=78 Identities=32% Similarity=0.402 Sum_probs=48.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH-Hh---cCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR-GAEKIKFL-KS---LGVD-HVV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~-~~~~~~~~-~~---~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
+++||+|++|++|..+++.+...|++|+++.+ +.++.+.. .+ .+.. ..+ |..+.. .+....+.. ..+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFE---SCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHH---HHHHHHHHHHHHcC
Confidence 47899999999999999999999999998887 44433322 22 2211 122 222221 122222211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
.+|++|.+.|.
T Consensus 78 ~id~vi~~ag~ 88 (242)
T TIGR01829 78 PIDVLVNNAGI 88 (242)
T ss_pred CCcEEEECCCC
Confidence 68999999873
No 390
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.19 E-value=0.033 Score=48.04 Aligned_cols=77 Identities=21% Similarity=0.297 Sum_probs=50.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc-EEEeCCCCCchhhHHHHHHHh--cCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD-HVVDLSNESVIPSVKEFLKAR--KLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~~~~--~~~~~d~v 225 (347)
.+++++|.|++|++|..+++.+...|++|++++++.++.+. .... ...|..+. +.+++..... ..+.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~---~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSA---EEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCH---HHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999999999999999887654321 1111 11233222 1233333221 12478999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++++|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 999873
No 391
>PRK05599 hypothetical protein; Provisional
Probab=96.18 E-value=0.048 Score=46.56 Aligned_cols=76 Identities=20% Similarity=0.293 Sum_probs=49.5
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCc--EEE--eCCCCCchhhHHHHHHHh--cCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVD--HVV--DLSNESVIPSVKEFLKAR--KLKG 221 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~--~v~--~~~~~~~~~~~~~~~~~~--~~~~ 221 (347)
+++|.|+++++|...++.+. .|++|+++.++.++.+.+ ++.|.. ..+ |..+.+- .+.+.+.. ..++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~---v~~~~~~~~~~~g~ 77 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDT---HRELVKQTQELAGE 77 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHH---HHHHHHHHHHhcCC
Confidence 68999999999999988776 599999999988876544 223422 222 3333222 33332221 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 78 id~lv~nag~ 87 (246)
T PRK05599 78 ISLAVVAFGI 87 (246)
T ss_pred CCEEEEecCc
Confidence 8999998874
No 392
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.18 E-value=0.058 Score=46.71 Aligned_cols=69 Identities=22% Similarity=0.202 Sum_probs=50.1
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
+...+++++|.|+ |+.+.+++..+...|+ +|+++.++.+|.+.+.+ ++.. + .... ....+|
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~---------~---~~~~----~~~~~d 180 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE---------W---RPDL----GGIEAD 180 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc---------c---hhhc----ccccCC
Confidence 4445679999999 9999999999999998 69999999987776643 4311 1 0000 123589
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
+++||++-
T Consensus 181 lvINaTp~ 188 (272)
T PRK12550 181 ILVNVTPI 188 (272)
T ss_pred EEEECCcc
Confidence 99999873
No 393
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.17 E-value=0.048 Score=41.18 Aligned_cols=79 Identities=22% Similarity=0.334 Sum_probs=50.0
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHh-cCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFLKS-LGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
-+|-|+|+ |.+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+ . -..+|++|-+
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~--~------------~~~aDlv~ia 75 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE--I------------LRDADLVFIA 75 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG--G------------GCC-SEEEE-
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc--c------------cccCCEEEEE
Confidence 38999999 9999999999999999988775 44445565554 44443333211 1 1478999999
Q ss_pred CCccchHHHHhccccC
Q 019049 229 VGGKLTKESLKLLNWG 244 (347)
Q Consensus 229 ~g~~~~~~~~~~l~~~ 244 (347)
+.++.+....+.|...
T Consensus 76 vpDdaI~~va~~La~~ 91 (127)
T PF10727_consen 76 VPDDAIAEVAEQLAQY 91 (127)
T ss_dssp S-CCHHHHHHHHHHCC
T ss_pred echHHHHHHHHHHHHh
Confidence 9998777666555543
No 394
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.17 E-value=0.062 Score=46.13 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=29.4
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEe
Q 019049 149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVA 181 (347)
Q Consensus 149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~ 181 (347)
.+++++|.|+++ ++|..++..+...|++|++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 578999999974 899999999999999998875
No 395
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.16 E-value=0.052 Score=42.52 Aligned_cols=83 Identities=27% Similarity=0.287 Sum_probs=62.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHhcCCcEEEeCCCCCchhhHHHHHHH--hcCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK-IKFLKSLGVDHVVDLSNESVIPSVKEFLKA--RKLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~--~~~~~~d~v 225 (347)
+|-.-||.|+.+++|.+++..+...|+.|...+...++ .+.++++|-..++...+..-.+.+...+.. ...+..|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 45567999999999999999999999999999876665 466789998888866555443334433332 234578999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++|.|.
T Consensus 88 vncagi 93 (260)
T KOG1199|consen 88 VNCAGI 93 (260)
T ss_pred eeccce
Confidence 999995
No 396
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.046 Score=53.97 Aligned_cols=79 Identities=32% Similarity=0.428 Sum_probs=53.0
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCcE-EE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVDH-VV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
+++++|.|++|++|..++..+...|++|+++++++++.+.+. ..+... ++ |..+. +..++..+.. ..+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~---~~~~~~~~~~~~~~g 447 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDS---AAVDHTVKDILAEHG 447 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCH---HHHHHHHHHHHHhcC
Confidence 679999999999999999998889999999999887765442 223221 22 22222 1233333211 124
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|++++++|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 68999999883
No 397
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.15 E-value=0.056 Score=46.06 Aligned_cols=79 Identities=23% Similarity=0.280 Sum_probs=47.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHH----HhcCCcE-EEeCCCCCchhhHHHHHHHh--cCCcc
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFL----KSLGVDH-VVDLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
+++||.|++|++|..+++.+...|++|+++. ++.++.+.. +..+... .+..+-.+. ++.+...+.. ....+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE-ADVIAMFDAVQSAFGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH-HHHHHHHHHHHHhcCCC
Confidence 5899999999999999999998999987765 444433322 2233222 222221111 1222222211 12468
Q ss_pred cEEEeCCC
Q 019049 223 DVLYDPVG 230 (347)
Q Consensus 223 d~v~d~~g 230 (347)
|++|.++|
T Consensus 82 d~li~~ag 89 (248)
T PRK06947 82 DALVNNAG 89 (248)
T ss_pred CEEEECCc
Confidence 99999887
No 398
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.14 E-value=0.16 Score=41.71 Aligned_cols=103 Identities=23% Similarity=0.406 Sum_probs=60.7
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHH
Q 019049 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
+.....+.++++||=.|+ |.|..+..+++.. +.+|++++.+++..+.+++ ++...+- ....+. .....
T Consensus 32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~-~~~~d~----~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVE-VIEGSA----PECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeE-EEECch----HHHHh
Confidence 345567788899888876 4455666666554 5799999999987776643 4543211 111111 11111
Q ss_pred HhcCCcccE-EEeCCCc--cchHHHHhccccCCEEEEEe
Q 019049 216 ARKLKGVDV-LYDPVGG--KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 216 ~~~~~~~d~-v~d~~g~--~~~~~~~~~l~~~G~~v~~g 251 (347)
... ..+|. .++.... ..++.+.+.|+++|+++...
T Consensus 105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 111 12344 4443222 44678889999999998764
No 399
>PRK14967 putative methyltransferase; Provisional
Probab=96.14 E-value=0.11 Score=43.66 Aligned_cols=95 Identities=25% Similarity=0.335 Sum_probs=61.6
Q ss_pred hcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 144 RAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 144 ~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
...+.++++||-.|+ |. |..+..+++. ++ +|++++.++...+.+++ .+....+. ..++ .. ...
T Consensus 31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~--~~d~---~~----~~~ 98 (223)
T PRK14967 31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR--RGDW---AR----AVE 98 (223)
T ss_pred hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE--ECch---hh----hcc
Confidence 445778899999998 54 8888887775 66 99999999987765543 34322111 1222 11 113
Q ss_pred CCcccEEEeCCCc----------------------------cchHHHHhccccCCEEEEE
Q 019049 219 LKGVDVLYDPVGG----------------------------KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 219 ~~~~d~v~d~~g~----------------------------~~~~~~~~~l~~~G~~v~~ 250 (347)
...||+|+...+. ..+..+.+.|+++|+++++
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4579999865321 0234577899999999875
No 400
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=96.14 E-value=0.071 Score=42.85 Aligned_cols=80 Identities=26% Similarity=0.300 Sum_probs=52.4
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH-HhcCC--cEE-E--eCCCCCc-hhhHHHHHHHhcCCcc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL-KSLGV--DHV-V--DLSNESV-IPSVKEFLKARKLKGV 222 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~-~~~g~--~~v-~--~~~~~~~-~~~~~~~~~~~~~~~~ 222 (347)
.+..+|.|+++++|.+.+|.+...|++|.+.+.+.+..+.. +.+|. +|. + |..+..- ..-.++..+. .+..
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~--~g~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS--LGTP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh--cCCC
Confidence 45689999999999999999999999999999877644433 45664 222 1 2222211 1112222222 2378
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
+++++|+|-
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999994
No 401
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.13 E-value=0.055 Score=40.80 Aligned_cols=97 Identities=16% Similarity=0.243 Sum_probs=61.6
Q ss_pred EEEecCCchHHHHHHHHHHHcC--CEEEEEecChh--h-HHHHHhcCCcEEEeCCCCCchh----------------hHH
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAE--K-IKFLKSLGVDHVVDLSNESVIP----------------SVK 211 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~----------------~~~ 211 (347)
|.|.|+||++|..+..+.+... ++|++.+.... + .+.++++....+.-.++..+.. -.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 6799999999999999999987 68877665433 2 2444678877766554432211 012
Q ss_pred HHHHHhcCCcccEEEeCCC-ccchHHHHhccccCCEEEE
Q 019049 212 EFLKARKLKGVDVLYDPVG-GKLTKESLKLLNWGAQILV 249 (347)
Q Consensus 212 ~~~~~~~~~~~d~v~d~~g-~~~~~~~~~~l~~~G~~v~ 249 (347)
.+.+......+|++++... ...+.-.+..++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 2233334457899988754 4777888888887766655
No 402
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=96.13 E-value=0.14 Score=43.54 Aligned_cols=163 Identities=21% Similarity=0.229 Sum_probs=92.4
Q ss_pred chHHHHHHHHHHHcCCEEEEEecChhhH----HHH-HhcCCcEEEeCCCCCchhhHHHHHHHh---cCCcccEEEeCCCc
Q 019049 160 GGVGVAAVQIGKVCGATIIAVARGAEKI----KFL-KSLGVDHVVDLSNESVIPSVKEFLKAR---KLKGVDVLYDPVGG 231 (347)
Q Consensus 160 g~~G~~~~~la~~~g~~V~~~~~~~~~~----~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~---~~~~~d~v~d~~g~ 231 (347)
+++|.+.++.+...|++|+++.++.++. +.+ ++.+.. ++..+-.+. +.++.+.+.. .++.+|+++++.+.
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~-~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDE-ESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSH-HHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcch-HHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 8999999999999999999999999873 333 345644 454433322 2233333221 12689999887653
Q ss_pred c------------------------------chHHHHhccccCCEEEEEeecCCCCCCcchh------------------
Q 019049 232 K------------------------------LTKESLKLLNWGAQILVIGFASGEIPVIPAN------------------ 263 (347)
Q Consensus 232 ~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------------------ 263 (347)
. ..+.+...++++|+++.++............
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~ 163 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAK 163 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHH
Confidence 1 1122334788889999987654322111111
Q ss_pred Hhhh-cceEEEEEEeccccccCchhHHHHHHHHHHHHHcCceeeeeceeeChhhHHHHHHHHHcCC
Q 019049 264 IALV-KNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRK 328 (347)
Q Consensus 264 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~a~~~~~~~~ 328 (347)
.+.. +++++.....+.......... ...++..+.+. -..+..+....+|+-++...+.+..
T Consensus 164 el~~~~gIrVN~V~pG~i~t~~~~~~-~~~~~~~~~~~---~~~pl~r~~~~~evA~~v~fL~s~~ 225 (241)
T PF13561_consen 164 ELAPKKGIRVNAVSPGPIETPMTERI-PGNEEFLEELK---KRIPLGRLGTPEEVANAVLFLASDA 225 (241)
T ss_dssp HHGGHGTEEEEEEEESSBSSHHHHHH-HTHHHHHHHHH---HHSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred HhccccCeeeeeecccceeccchhcc-ccccchhhhhh---hhhccCCCcCHHHHHHHHHHHhCcc
Confidence 1235 688888887665442211110 00122222222 1123334457888999988888754
No 403
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.12 E-value=0.12 Score=47.00 Aligned_cols=92 Identities=25% Similarity=0.337 Sum_probs=63.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH-HhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFL-KSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
.++++||+|+ |-+|..++..+...|. +|++..++.+|.+.+ +++|+..+ . ..++.... ..+|+||
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---------l~el~~~l--~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---------LEELLEAL--AEADVVI 243 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---------HHHHHHhh--hhCCEEE
Confidence 6789999999 9999999999999996 899999999987654 67884432 2 23333333 4689999
Q ss_pred eCCCcc--ch--HHHHhccccCCE--EEEEeec
Q 019049 227 DPVGGK--LT--KESLKLLNWGAQ--ILVIGFA 253 (347)
Q Consensus 227 d~~g~~--~~--~~~~~~l~~~G~--~v~~g~~ 253 (347)
-+++.+ .+ ....+.++..-+ +++++.|
T Consensus 244 ssTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 244 SSTSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred EecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 999874 33 344455555443 3444433
No 404
>PRK07574 formate dehydrogenase; Provisional
Probab=96.12 E-value=0.044 Score=49.81 Aligned_cols=88 Identities=18% Similarity=0.197 Sum_probs=62.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|.|+|. |.+|..+++.++.+|.+|++.+++....+..+++|.... . + .+++. ...|+|+.+
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~---~--~----l~ell-----~~aDvV~l~ 255 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH---V--S----FDSLV-----SVCDVVTIH 255 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec---C--C----HHHHh-----hcCCEEEEc
Confidence 4679999999 999999999999999999999987643444445553211 1 1 23332 356889888
Q ss_pred CCc-c----ch-HHHHhccccCCEEEEEe
Q 019049 229 VGG-K----LT-KESLKLLNWGAQILVIG 251 (347)
Q Consensus 229 ~g~-~----~~-~~~~~~l~~~G~~v~~g 251 (347)
+.. + .+ ...+..|+++..++.++
T Consensus 256 lPlt~~T~~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 256 CPLHPETEHLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred CCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence 773 1 22 45788899988887765
No 405
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.11 E-value=0.11 Score=43.55 Aligned_cols=101 Identities=18% Similarity=0.290 Sum_probs=60.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEE---------eCCCCCchhhHHHHHH
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVV---------DLSNESVIPSVKEFLK 215 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~---------~~~~~~~~~~~~~~~~ 215 (347)
.+.++.+||+.|+ |.|.-++-+|. .|++|++++.++...+.+. +.+..... ......+ ....+..
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~--~~~D~~~ 108 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITI--YCGDFFA 108 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEE--EECcccC
Confidence 4456789999998 56777777765 7999999999998777653 33321100 0000000 0000111
Q ss_pred Hh--cCCcccEEEeCCC-----c----cchHHHHhccccCCEEEEEe
Q 019049 216 AR--KLKGVDVLYDPVG-----G----KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 216 ~~--~~~~~d~v~d~~g-----~----~~~~~~~~~l~~~G~~v~~g 251 (347)
.. ....||.|+|.+- . ..+..+.++|+|+|++.++.
T Consensus 109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 10 1246899998653 1 24577889999999765543
No 406
>PRK09135 pteridine reductase; Provisional
Probab=96.09 E-value=0.079 Score=45.01 Aligned_cols=36 Identities=22% Similarity=0.290 Sum_probs=32.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~ 184 (347)
.++++||+|++|++|..+++.+...|++|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 457999999999999999999888999999999853
No 407
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.067 Score=45.46 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=29.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEec
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVAR 182 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~ 182 (347)
.+.+++|.|++|++|...+..+...|++|+++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 3578999999999999999988889999988654
No 408
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.09 E-value=0.062 Score=45.63 Aligned_cols=78 Identities=22% Similarity=0.278 Sum_probs=49.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHH----HhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAV-ARGAEKIKFL----KSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLK 220 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~-~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~ 220 (347)
++++|.|++|++|...+..+...|++|+++ .+++++.+.. +..+.. ..+ |..+.+ .+++..+.. ..+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~---~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDEN---QVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHH---HHHHHHHHHHHhCC
Confidence 479999999999999999998899998774 4555543322 223322 122 333222 233333322 245
Q ss_pred cccEEEeCCCc
Q 019049 221 GVDVLYDPVGG 231 (347)
Q Consensus 221 ~~d~v~d~~g~ 231 (347)
++|+++.++|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 78999999884
No 409
>PRK06940 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.072 Score=46.34 Aligned_cols=77 Identities=26% Similarity=0.383 Sum_probs=49.3
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH----hcCCc-EEE--eCCCCCchhhHHHHHHHh-cCCc
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK----SLGVD-HVV--DLSNESVIPSVKEFLKAR-KLKG 221 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~----~~g~~-~v~--~~~~~~~~~~~~~~~~~~-~~~~ 221 (347)
+++++|.|+ |++|..++..+. .|++|++++++.++.+.+. ..|.. ..+ |..+.+- .....+.. ..++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~---i~~~~~~~~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRES---VKALAATAQTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHH---HHHHHHHHHhcCC
Confidence 457899998 899999998885 7999999999877654432 23422 122 3333221 33333322 1247
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++++++|.
T Consensus 77 id~li~nAG~ 86 (275)
T PRK06940 77 VTGLVHTAGV 86 (275)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 410
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.07 E-value=0.14 Score=43.03 Aligned_cols=89 Identities=22% Similarity=0.341 Sum_probs=58.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC---EEEEEecC----hhh--------HHHHHhcCCcEEEeCCCCCchhhHHHH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA---TIIAVARG----AEK--------IKFLKSLGVDHVVDLSNESVIPSVKEF 213 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~---~V~~~~~~----~~~--------~~~~~~~g~~~v~~~~~~~~~~~~~~~ 213 (347)
.+++++|+|+ |+.|..++..+...|. ++++++++ .+| .++++.++... .+ .+ +.+.
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~----l~~~ 94 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT----LKEA 94 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC----HHHH
Confidence 5679999999 9999999998888897 49999987 343 23344443211 10 11 2122
Q ss_pred HHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEe
Q 019049 214 LKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIG 251 (347)
Q Consensus 214 ~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g 251 (347)
. .++|++|++++...+ ...++.+++...+..+.
T Consensus 95 l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 95 L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 248999999985444 46677777776665543
No 411
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.06 E-value=0.035 Score=52.30 Aligned_cols=76 Identities=21% Similarity=0.426 Sum_probs=55.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh---------------------hhHHHHHhcCCcEEEeCCCCCch
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA---------------------EKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
.+++|+|+|+ |+.|+.++..++..|++|++++..+ ...++++++|++..++.......
T Consensus 140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 5789999999 9999999999999999999988653 24567788898766554321100
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCc
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
..+.. . .++|.+|.++|.
T Consensus 219 -~~~~~---~--~~~D~vilAtGa 236 (467)
T TIGR01318 219 -SLDDL---L--EDYDAVFLGVGT 236 (467)
T ss_pred -CHHHH---H--hcCCEEEEEeCC
Confidence 01221 1 369999999996
No 412
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.06 E-value=0.064 Score=52.99 Aligned_cols=80 Identities=24% Similarity=0.381 Sum_probs=53.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-h----cCCc--EE--EeCCCCCchhhHHHHHHHh--
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-S----LGVD--HV--VDLSNESVIPSVKEFLKAR-- 217 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~----~g~~--~v--~~~~~~~~~~~~~~~~~~~-- 217 (347)
.++++||.|++|++|..+++.+...|++|++++++.++.+... + .+.. .. .|..+. +++++.....
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~---~~v~~a~~~i~~ 489 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE---QAVKAAFADVAL 489 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH---HHHHHHHHHHHH
Confidence 4789999999999999999999889999999999887655442 2 2321 11 222222 1233333221
Q ss_pred cCCcccEEEeCCCc
Q 019049 218 KLKGVDVLYDPVGG 231 (347)
Q Consensus 218 ~~~~~d~v~d~~g~ 231 (347)
..+++|++++++|.
T Consensus 490 ~~g~iDilV~nAG~ 503 (676)
T TIGR02632 490 AYGGVDIVVNNAGI 503 (676)
T ss_pred hcCCCcEEEECCCC
Confidence 23579999999884
No 413
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.03 E-value=0.048 Score=48.57 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=34.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIK 188 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~ 188 (347)
.|++|||.|++|.+|..++..+...|++|+++.++..+.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4689999999999999999988889999999888765433
No 414
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.03 E-value=0.25 Score=44.09 Aligned_cols=100 Identities=17% Similarity=0.242 Sum_probs=65.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHH-HHcCC-EEEEEecChhhHHHHH-h----cCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIG-KVCGA-TIIAVARGAEKIKFLK-S----LGVDHVVDLSNESVIPSVKEFLKARKLK 220 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la-~~~g~-~V~~~~~~~~~~~~~~-~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
...++++|+|+ |..|...+..+ ...+. +|.+.++++++.+.+. + ++.... .+.+ .++.. .
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~------~~~~~-----~ 191 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS------ADEAI-----E 191 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC------HHHHH-----h
Confidence 35678999999 99998777554 45576 7999999988776553 2 243211 1211 22222 4
Q ss_pred cccEEEeCCCccchHHHHhccccCCEEEEEeecCCCCCCcc
Q 019049 221 GVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIP 261 (347)
Q Consensus 221 ~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 261 (347)
..|+|+.|+++..--.. ++++++-.+..+|.........+
T Consensus 192 ~aDiVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~ 231 (325)
T PRK08618 192 EADIIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELP 231 (325)
T ss_pred cCCEEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCC
Confidence 68999999987433233 88999989989987654433333
No 415
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.01 E-value=0.034 Score=51.78 Aligned_cols=86 Identities=22% Similarity=0.288 Sum_probs=56.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI-KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
+|+|+|+.|.+|.+.+..++..|.+|++.++++++. +.+.++|+... . + ..+. -..+|+|+-|+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~--~----~~e~-----~~~aDvVIlavp 67 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---N--D----NIDA-----AKDADIVIISVP 67 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---c--C----HHHH-----hccCCEEEEecC
Confidence 689999779999999999999999999999988764 45566675211 0 1 1111 134677777776
Q ss_pred ccc----hHHHHhccccCCEEEEEe
Q 019049 231 GKL----TKESLKLLNWGAQILVIG 251 (347)
Q Consensus 231 ~~~----~~~~~~~l~~~G~~v~~g 251 (347)
... +..+...++++..++.++
T Consensus 68 ~~~~~~vl~~l~~~l~~~~iViDvs 92 (437)
T PRK08655 68 INVTEDVIKEVAPHVKEGSLLMDVT 92 (437)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 533 233344455566666655
No 416
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.01 E-value=0.055 Score=45.74 Aligned_cols=90 Identities=22% Similarity=0.351 Sum_probs=61.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE--KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
|+|.|++|.+|...++.+...+.+|.+++++.. +.+.++..|+..+ ..+-.+ .+.+.+.. .++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~----~~~l~~al--~g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYDD----PESLVAAL--KGVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT-----HHHHHHHH--TTCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccCC----HHHHHHHH--cCCceEEeecC
Confidence 799999999999999999998999999999864 3556677887544 333222 34444444 48999999888
Q ss_pred c---c---chHHHHhccccCC--EEEE
Q 019049 231 G---K---LTKESLKLLNWGA--QILV 249 (347)
Q Consensus 231 ~---~---~~~~~~~~l~~~G--~~v~ 249 (347)
. . ....++++.+.-| +++.
T Consensus 74 ~~~~~~~~~~~~li~Aa~~agVk~~v~ 100 (233)
T PF05368_consen 74 PSHPSELEQQKNLIDAAKAAGVKHFVP 100 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHHHT-SEEEE
T ss_pred cchhhhhhhhhhHHHhhhccccceEEE
Confidence 3 2 2234555555544 4543
No 417
>PRK06123 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.067 Score=45.52 Aligned_cols=79 Identities=23% Similarity=0.395 Sum_probs=48.5
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHH----HHhcCCcE-EE--eCCCCCchhhHHHHHHHh--cC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKF----LKSLGVDH-VV--DLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~~~~~~--~~ 219 (347)
++++||.|++|++|..+++.+...|++|+... +++++.+. ++..+... .+ |..+. +...+..... ..
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE---ADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCH---HHHHHHHHHHHHHh
Confidence 46899999999999999998888999887765 34443332 23334322 22 33322 1233333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+.+|+++.++|.
T Consensus 79 ~~id~li~~ag~ 90 (248)
T PRK06123 79 GRLDALVNNAGI 90 (248)
T ss_pred CCCCEEEECCCC
Confidence 468999998874
No 418
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=95.99 E-value=0.025 Score=48.39 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=54.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|||.||||= |..++..+...|.+|+++..++...+.+...|...+.... .+ ...+.......++|+|+|++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~-l~----~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGA-LD----PQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECC-CC----HHHHHHHHHhcCCCEEEEcCCH
Confidence 6999999664 9999988888899999999998877777777655554322 12 2234455556789999999875
No 419
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.97 E-value=0.024 Score=46.70 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=60.5
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
......++.+||-.|+ |.|..+..+++. |.+|++++.+++-.+.+++ .+...+ .....++ ....-
T Consensus 24 ~~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~-------~~~~~ 92 (197)
T PRK11207 24 EAVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDL-------NNLTF 92 (197)
T ss_pred HhcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecCh-------hhCCc
Confidence 3444557789999998 347777777764 8899999999886665543 232211 1111111 11111
Q ss_pred CCcccEEEeCCCc---------cchHHHHhccccCCEEEEEe
Q 019049 219 LKGVDVLYDPVGG---------KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 219 ~~~~d~v~d~~g~---------~~~~~~~~~l~~~G~~v~~g 251 (347)
...||+|+.+..- ..+..+.++|+++|.++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3469999875431 23567788999999976554
No 420
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.96 E-value=0.074 Score=43.27 Aligned_cols=96 Identities=24% Similarity=0.372 Sum_probs=60.5
Q ss_pred CCCCCCEEEEecCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHHHhcCC
Q 019049 146 QLSSGQVLLVLGAAGGVGVAAVQIGKV-CGATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLKARKLK 220 (347)
Q Consensus 146 ~~~~~~~VlI~g~~g~~G~~~~~la~~-~g~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
.+.++.+||-.|+ |.|..+..+++. .+++|++++.+++..+.++ ..+.+. +.....+. .. .....
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~----~~---~~~~~ 111 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRA----EE---FGQEE 111 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccH----hh---CCCCC
Confidence 3456889999988 345555555554 4679999999988666554 344432 11111121 11 11235
Q ss_pred cccEEEeCCCc---cchHHHHhccccCCEEEEEe
Q 019049 221 GVDVLYDPVGG---KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 221 ~~d~v~d~~g~---~~~~~~~~~l~~~G~~v~~g 251 (347)
.||+|+-.... ..++.+.++|+++|+++.+-
T Consensus 112 ~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 112 KFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 79999864332 34577889999999999873
No 421
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.95 E-value=0.037 Score=48.31 Aligned_cols=74 Identities=28% Similarity=0.218 Sum_probs=50.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcE-EEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
.+++++|+|+ |+.+.+++..+...|+ +|+++.++.+|.+.+. +++... +.... . ..+... .-..+|+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~---~~~~~~--~~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---G---DSGGLA--IEKAAEVL 194 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---c---hhhhhh--cccCCCEE
Confidence 5789999999 9999999999999998 7999999988876664 343211 11110 0 011111 11468999
Q ss_pred EeCCCc
Q 019049 226 YDPVGG 231 (347)
Q Consensus 226 ~d~~g~ 231 (347)
++|++.
T Consensus 195 InaTp~ 200 (282)
T TIGR01809 195 VSTVPA 200 (282)
T ss_pred EECCCC
Confidence 999885
No 422
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.94 E-value=0.032 Score=50.15 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=32.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~ 185 (347)
++++|||.|++|.+|..+++.+...|++|+++++...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 4679999999999999999999999999999887543
No 423
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.94 E-value=0.064 Score=44.71 Aligned_cols=94 Identities=18% Similarity=0.250 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE--EEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH--VVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
-+|.+||=+|+.|| ...+-+.++|++|++++.+++-.+.++...... -+++.... ++++.. .++.||+|
T Consensus 58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~----~edl~~--~~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT----VEDLAS--AGGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhh----HHHHHh--cCCCccEE
Confidence 37889999999554 444555568999999999999888886422111 13344322 222222 23689999
Q ss_pred EeC-----CCc--cchHHHHhccccCCEEEEE
Q 019049 226 YDP-----VGG--KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 226 ~d~-----~g~--~~~~~~~~~l~~~G~~v~~ 250 (347)
++. +.. ..+..+.++++|+|.+.+.
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 753 333 2457789999999998874
No 424
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=95.93 E-value=0.13 Score=42.52 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=62.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.|++|+|+|+ |.+|.-=+.++...|++|++++..- .+...+...+- +......+. . + ...++++||-
T Consensus 11 ~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~---i~~~~~~~~---~---~--~~~~~~lvia 78 (210)
T COG1648 11 EGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGK---IKWIEREFD---A---E--DLDDAFLVIA 78 (210)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcC---cchhhcccC---h---h--hhcCceEEEE
Confidence 5789999999 9999998999999999999998766 33333333222 111112220 0 0 1134889999
Q ss_pred CCCccch-HHHHhccccCCEEEEEeecC
Q 019049 228 PVGGKLT-KESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 228 ~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 254 (347)
+++++.+ +......+..+.+|.+....
T Consensus 79 At~d~~ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 79 ATDDEELNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred eCCCHHHHHHHHHHHHHhCCceeccCCc
Confidence 9998665 55667778888887765433
No 425
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.079 Score=45.44 Aligned_cols=35 Identities=26% Similarity=0.304 Sum_probs=30.5
Q ss_pred CCCEEEEecCCc--hHHHHHHHHHHHcCCEEEEEecC
Q 019049 149 SGQVLLVLGAAG--GVGVAAVQIGKVCGATIIAVARG 183 (347)
Q Consensus 149 ~~~~VlI~g~~g--~~G~~~~~la~~~g~~V~~~~~~ 183 (347)
.++++||.|+++ ++|...+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 457899999984 89999998888889999999876
No 426
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.92 E-value=0.071 Score=44.78 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=71.2
Q ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHHH
Q 019049 142 VHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGA--TIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 142 ~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~--~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~~ 215 (347)
....++.||++|+=.|. |.|.+++-+|+..|. +|+..+...+..+.++ ++|....+.....+. .+
T Consensus 87 ~~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv-------~~ 157 (256)
T COG2519 87 VARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDV-------RE 157 (256)
T ss_pred HHHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccc-------cc
Confidence 36789999999998875 568888889988875 8999999888777664 345333222222222 22
Q ss_pred HhcCCcccEEEeCCCc--cchHHHHhccccCCEEEEE
Q 019049 216 ARKLKGVDVLYDPVGG--KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 216 ~~~~~~~d~v~d~~g~--~~~~~~~~~l~~~G~~v~~ 250 (347)
...+..+|.+|--... ..++.+.++|+++|.++.+
T Consensus 158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y 194 (256)
T COG2519 158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVY 194 (256)
T ss_pred cccccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEE
Confidence 2234478888755554 5779999999999999986
No 427
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.90 E-value=0.078 Score=48.65 Aligned_cols=90 Identities=24% Similarity=0.332 Sum_probs=56.5
Q ss_pred EEEecCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHh--cCCc-EEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCG-A-TIIAVARGAEKIKFLKS--LGVD-HVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g-~-~V~~~~~~~~~~~~~~~--~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+ .+.. .....+-.+ .+.+.+.. .+.|+|++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~l~~~~--~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PESLAELL--RGCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HHHHHHHH--TTSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HHHHHHHH--hcCCEEEE
Confidence 789999 999999999888775 4 89999999998777754 2221 111112112 23344443 35599999
Q ss_pred CCCccchH-HHHhccccCCEEEE
Q 019049 228 PVGGKLTK-ESLKLLNWGAQILV 249 (347)
Q Consensus 228 ~~g~~~~~-~~~~~l~~~G~~v~ 249 (347)
|+|..... .+-.+++.+-.+++
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVD 96 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEE
T ss_pred CCccchhHHHHHHHHHhCCCeec
Confidence 99976433 44466677778877
No 428
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.07 Score=44.86 Aligned_cols=75 Identities=20% Similarity=0.310 Sum_probs=49.3
Q ss_pred EEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hc--CC-cEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 154 LVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SL--GV-DHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 154 lI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~--g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
+|.|++|++|...++.+...|++|++++++.++.+... .+ +. .+++..+-.+ .+++++..+.. +.+|++++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~--~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITD-EAAVDAFFAEA--GPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHhc--CCCCEEEECC
Confidence 58999999999999999889999999999877655432 22 22 1222222111 22244444433 4689999998
Q ss_pred Cc
Q 019049 230 GG 231 (347)
Q Consensus 230 g~ 231 (347)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 74
No 429
>PRK07069 short chain dehydrogenase; Validated
Probab=95.89 E-value=0.039 Score=47.07 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=49.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHH-hc----CCcE----EEeCCCCCchhhHHHHHHHh--cC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFLK-SL----GVDH----VVDLSNESVIPSVKEFLKAR--KL 219 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~~-~~----g~~~----v~~~~~~~~~~~~~~~~~~~--~~ 219 (347)
+++|.|++|++|...++.+...|++|++++++ .++.+.+. ++ +... ..|..+.+ ..++..... ..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEA---QWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHH---HHHHHHHHHHHHc
Confidence 38999999999999999998899999999987 45444332 22 2211 12333322 133333221 12
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
+++|+++.++|.
T Consensus 78 ~~id~vi~~ag~ 89 (251)
T PRK07069 78 GGLSVLVNNAGV 89 (251)
T ss_pred CCccEEEECCCc
Confidence 468999999873
No 430
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.89 E-value=0.058 Score=48.13 Aligned_cols=39 Identities=31% Similarity=0.337 Sum_probs=34.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI 187 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~ 187 (347)
.+++|||.|++|.+|..++..+...|++|++++++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch
Confidence 578999999999999999999999999999888776543
No 431
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.85 E-value=0.13 Score=44.48 Aligned_cols=105 Identities=18% Similarity=0.309 Sum_probs=66.7
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcC
Q 019049 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKL 219 (347)
Q Consensus 141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~ 219 (347)
+....++.++.+||=+|+ | .|..+..+++..+++|++++.+++-.+.+++... ..-+.....+. .. .....
T Consensus 44 ~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~---~~---~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDI---LK---KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCc---cc---CCCCC
Confidence 335678899999999988 3 4556667777778899999999987777765321 10011111111 00 00123
Q ss_pred CcccEEEeCC-----C--c--cchHHHHhccccCCEEEEEeec
Q 019049 220 KGVDVLYDPV-----G--G--KLTKESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 220 ~~~d~v~d~~-----g--~--~~~~~~~~~l~~~G~~v~~g~~ 253 (347)
..||+|+..- + . ..++.+.+.|+|+|+++.....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~ 158 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDYC 158 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 5699998521 2 1 2457788999999999987543
No 432
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.85 E-value=0.0041 Score=48.73 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=59.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCC------CchhhHHHHHHHhcCCcccEEE
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNE------SVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
|+|.|+ |.+|...+..++..|.+|..+.+.+ +.+..++.|........+. .... . ......+|++|
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~D~vi 72 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISA-P-----SADAGPYDLVI 72 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESS-H-----GHHHSTESEEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCc-c-----hhccCCCcEEE
Confidence 689999 9999999988888999999999988 7777877663322111000 0000 0 11236899999
Q ss_pred eCCCccchH----HHHhccccCCEEEEEe
Q 019049 227 DPVGGKLTK----ESLKLLNWGAQILVIG 251 (347)
Q Consensus 227 d~~g~~~~~----~~~~~l~~~G~~v~~g 251 (347)
-|+-..... .+...+.+...++.+.
T Consensus 73 v~vKa~~~~~~l~~l~~~~~~~t~iv~~q 101 (151)
T PF02558_consen 73 VAVKAYQLEQALQSLKPYLDPNTTIVSLQ 101 (151)
T ss_dssp E-SSGGGHHHHHHHHCTGEETTEEEEEES
T ss_pred EEecccchHHHHHHHhhccCCCcEEEEEe
Confidence 999764443 3445556666666653
No 433
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.84 E-value=0.14 Score=45.92 Aligned_cols=87 Identities=25% Similarity=0.309 Sum_probs=62.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|.|+|. |.+|...++.++.+|.+|++.+++.... .....|... .+ .+++. ...|+|+.+
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~------~~----l~ell-----~~aDiV~l~ 211 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEY------RP----LEELL-----RESDFVSLH 211 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEe------cC----HHHHH-----hhCCEEEEe
Confidence 5789999999 9999999999999999999999875432 233444321 11 23332 356999988
Q ss_pred CCc-c----ch-HHHHhccccCCEEEEEee
Q 019049 229 VGG-K----LT-KESLKLLNWGAQILVIGF 252 (347)
Q Consensus 229 ~g~-~----~~-~~~~~~l~~~G~~v~~g~ 252 (347)
+.. + .+ ...+..|+++..++.++.
T Consensus 212 lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 212 VPLTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred CCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 874 1 23 567899999998888753
No 434
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.84 E-value=0.08 Score=45.50 Aligned_cols=95 Identities=22% Similarity=0.223 Sum_probs=65.9
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCc
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC-GATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKG 221 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~-g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
......++++||=+|+ |.|..+..+++.. +.+|++++.++.-.+.+++.+...+ ..+ . . .......
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d---~----~---~~~~~~~ 89 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGD---V----R---DWKPKPD 89 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcC---h----h---hCCCCCC
Confidence 4556678899999988 3367777777765 6799999999988888877664432 211 1 1 1112357
Q ss_pred ccEEEeCCC-----c--cchHHHHhccccCCEEEEE
Q 019049 222 VDVLYDPVG-----G--KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 222 ~d~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~ 250 (347)
||+|+.... . ..+..+.+.|+|+|.++..
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 999987543 2 3457788999999999875
No 435
>PRK14982 acyl-ACP reductase; Provisional
Probab=95.82 E-value=0.19 Score=44.88 Aligned_cols=160 Identities=16% Similarity=0.149 Sum_probs=89.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEE
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~-~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v 225 (347)
.+++|+|+||+|.+|..+++.+.. .|. +++++.++.++...+. +++...+ ..+.+.. ...|+|
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------------~~l~~~l--~~aDiV 219 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------------LSLEEAL--PEADIV 219 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------------HhHHHHH--ccCCEE
Confidence 578999999999999999888864 565 8999999877776654 3331111 1111222 368999
Q ss_pred EeCCCcc-chHHHHhccccCCEEEEEeecCCCCCCcchhHhhhcceEEEE-------EEec-cc----cc-cCchhHHHH
Q 019049 226 YDPVGGK-LTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHG-------LYWG-SY----KI-HRPHVLEDS 291 (347)
Q Consensus 226 ~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~----~~-~~~~~~~~~ 291 (347)
+.+++.+ ....-...+++.-.+++++.+..-.+... ..+..+.- .... .. .. ..+......
T Consensus 220 v~~ts~~~~~~I~~~~l~~~~~viDiAvPRDVd~~v~-----~~~V~v~~gG~V~~p~~vd~~l~~~v~~~~~~r~~~Ac 294 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKPCLMIDGGYPKNLDTKVQ-----GPGIHVLKGGIVEHSLDIDWKIMEIAEMDNPQRQMFAC 294 (340)
T ss_pred EECCcCCcCCcCCHHHhCCCeEEEEecCCCCCCcccC-----CCCEEEEeCCccccCCCcCccHHHHHhccchhhHHHHH
Confidence 9988863 22111234566667777765542111111 12222211 0000 00 01 111112234
Q ss_pred HHHHHHHHHcCcee-eeecee-eChhhHHHHHHHHHcC
Q 019049 292 LRELLLWAAKGLIT-IHISHT-YSPSEANLAFSAIEDR 327 (347)
Q Consensus 292 ~~~~~~~l~~g~l~-~~~~~~-~~~~~~~~a~~~~~~~ 327 (347)
+.+.+=+-.+|... ..+.+. .+++++.+..+...+.
T Consensus 295 ~AEtiiL~leg~~~~fS~Gr~~i~~~~v~~i~~~a~kH 332 (340)
T PRK14982 295 FAEAMLLEFEGCHTNFSWGRNQITLEKMEFIGEASVKH 332 (340)
T ss_pred HHHHHHHHhcCCccCCCcCccccCHHHHHHHHHHHHHc
Confidence 45555555677776 356666 7889988887766554
No 436
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.81 E-value=0.035 Score=54.49 Aligned_cols=75 Identities=19% Similarity=0.367 Sum_probs=56.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh---------------------hHHHHHhcCCcEEEeCCCC-Cc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---------------------KIKFLKSLGVDHVVDLSNE-SV 206 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~-~~ 206 (347)
.+++|+|+|+ |+.|+.++..++..|++|++++..+. +.++++++|++..++.... +.
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 4889999999 99999999999999999999987652 4567788898766654321 11
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
.... .. .++|.+|.++|.
T Consensus 388 --~~~~---l~--~~~DaV~latGa 405 (639)
T PRK12809 388 --TFSD---LT--SEYDAVFIGVGT 405 (639)
T ss_pred --CHHH---HH--hcCCEEEEeCCC
Confidence 0221 11 468999999996
No 437
>PRK08317 hypothetical protein; Provisional
Probab=95.81 E-value=0.11 Score=43.81 Aligned_cols=99 Identities=15% Similarity=0.254 Sum_probs=66.7
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhc----CCc-EEEeCCCCCchhhHHHHHH
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSL----GVD-HVVDLSNESVIPSVKEFLK 215 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~~ 215 (347)
....+.++++||-.|+ |. |..+..+++.. +.++++++.+++..+.+++. +.. .+...+.... .
T Consensus 13 ~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~--------~ 82 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGL--------P 82 (241)
T ss_pred HHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccC--------C
Confidence 5677889999999998 43 88888888876 35899999999887777654 111 1111111110 0
Q ss_pred HhcCCcccEEEeCC-----Cc--cchHHHHhccccCCEEEEEee
Q 019049 216 ARKLKGVDVLYDPV-----GG--KLTKESLKLLNWGAQILVIGF 252 (347)
Q Consensus 216 ~~~~~~~d~v~d~~-----g~--~~~~~~~~~l~~~G~~v~~g~ 252 (347)
.....||.|+... .+ ..+..+.++|+++|.++....
T Consensus 83 -~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 83 -FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred -CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 1235789887532 22 356788999999999987653
No 438
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.79 E-value=0.12 Score=40.65 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=59.2
Q ss_pred ccCcchHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 128 AALPVAFGTSHVALVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
..+|++....+..|....---.|++|+|.|.+..+|.-++.++...|+.|+........
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~--------------------- 72 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKN--------------------- 72 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSS---------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCc---------------------
Confidence 34555555555555332222478999999998899999999999999999887654321
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
.++.. ...|+++-++|.+.+-. .++++++..++.+|...
T Consensus 73 --l~~~~-----~~ADIVVsa~G~~~~i~-~~~ik~gavVIDvG~~~ 111 (160)
T PF02882_consen 73 --LQEIT-----RRADIVVSAVGKPNLIK-ADWIKPGAVVIDVGINY 111 (160)
T ss_dssp --HHHHH-----TTSSEEEE-SSSTT-B--GGGS-TTEEEEE--CEE
T ss_pred --cccee-----eeccEEeeeeccccccc-cccccCCcEEEecCCcc
Confidence 11221 46799999999765522 36889998999888553
No 439
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.78 E-value=0.065 Score=50.72 Aligned_cols=69 Identities=23% Similarity=0.276 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-----hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-----KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
.+++|+|+|+ |++|+.++..++..|++|++++.++. ..+.+++.|.....+.... ....+|
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~~D 80 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPEDTD 80 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCCCC
Confidence 5679999999 99999999999999999999986542 1234566776554432211 024578
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
.|+.+.|-
T Consensus 81 ~Vv~s~Gi 88 (480)
T PRK01438 81 LVVTSPGW 88 (480)
T ss_pred EEEECCCc
Confidence 99888875
No 440
>PLN00015 protochlorophyllide reductase
Probab=95.78 E-value=0.064 Score=47.55 Aligned_cols=75 Identities=24% Similarity=0.301 Sum_probs=49.2
Q ss_pred EEecCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHH-hcC---Cc-E--EEeCCCCCchhhHHHHHHHh--cCCccc
Q 019049 154 LVLGAAGGVGVAAVQIGKVCG-ATIIAVARGAEKIKFLK-SLG---VD-H--VVDLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 154 lI~g~~g~~G~~~~~la~~~g-~~V~~~~~~~~~~~~~~-~~g---~~-~--v~~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
+|.|+++++|..+++.+...| ++|++++++.++.+.+. +++ .. . ..|..+.+ +++++.... ..+++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~---~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD---SVRQFVDNFRRSGRPLD 77 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHH---HHHHHHHHHHhcCCCCC
Confidence 589999999999999888899 89999999887665443 332 11 1 12333322 233333322 234789
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
++++++|.
T Consensus 78 ~lInnAG~ 85 (308)
T PLN00015 78 VLVCNAAV 85 (308)
T ss_pred EEEECCCc
Confidence 99998873
No 441
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=95.76 E-value=0.021 Score=48.43 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=47.3
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCcc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGK 232 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~ 232 (347)
|+|.|++|-+|...++.++..|.+|+++++++.+.+.-...... . .+.+.... ..++|+|||-+|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~---------~---~~~~~~~~-~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT---------L---WEGLADAL-TLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc---------c---cchhhhcc-cCCCCEEEECCCCc
Confidence 68999999999999999999999999999998766543222211 0 11111111 12799999998864
No 442
>PLN02214 cinnamoyl-CoA reductase
Probab=95.75 E-value=0.092 Score=47.31 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=34.0
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~ 186 (347)
++++|||.|++|.+|..++..+...|++|++++++.++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 56799999999999999999999999999999987653
No 443
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.71 E-value=0.11 Score=46.98 Aligned_cols=100 Identities=16% Similarity=0.254 Sum_probs=66.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHc--CCEEEEEe--cChhhH-HHHHhcCCcEEEeCCCCCchh--------------hHH
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVC--GATIIAVA--RGAEKI-KFLKSLGVDHVVDLSNESVIP--------------SVK 211 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~--~~~~~~-~~~~~~g~~~v~~~~~~~~~~--------------~~~ 211 (347)
++|.|.|+||++|..++...+.. .++|++++ ++.+++ +.+++++...+.-.+.....+ -.+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 57999999999999999988766 56888776 333343 444678877665544321100 011
Q ss_pred HHHHHhcCCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049 212 EFLKARKLKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 212 ~~~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 250 (347)
.+.+......+|+|+++.++ ..+...+.+++.|-++.+.
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 22233333468999998876 5677788888888777664
No 444
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.71 E-value=0.12 Score=46.81 Aligned_cols=41 Identities=27% Similarity=0.217 Sum_probs=35.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
.+.+|||+|++|.+|..+++.+...|++|++++++.++...
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~ 49 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLH 49 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 46799999999999999999999899999999887665443
No 445
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.71 E-value=0.061 Score=48.41 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=31.5
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~ 185 (347)
++|||+||+|.+|..+++.+...|++|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999999999999999987653
No 446
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=95.70 E-value=0.072 Score=45.45 Aligned_cols=37 Identities=41% Similarity=0.559 Sum_probs=32.6
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE 185 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~ 185 (347)
.+++++|.|+++++|.+++..+...|++|+++.++.+
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 5789999999999999999888899999888887754
No 447
>PLN02244 tocopherol O-methyltransferase
Probab=95.69 E-value=0.12 Score=46.50 Aligned_cols=94 Identities=13% Similarity=0.244 Sum_probs=63.1
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCc---EEEeCCCCCchhhHHHHHHHhcCC
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVD---HVVDLSNESVIPSVKEFLKARKLK 220 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
.++++||=+|+ |.|..+..+++..|++|++++.++...+.+++ .|.. .+...+..+. -...+
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~---------~~~~~ 185 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ---------PFEDG 185 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC---------CCCCC
Confidence 67889998887 45777888888889999999999987666543 2321 1111111111 01235
Q ss_pred cccEEEeCCCc-------cchHHHHhccccCCEEEEEee
Q 019049 221 GVDVLYDPVGG-------KLTKESLKLLNWGAQILVIGF 252 (347)
Q Consensus 221 ~~d~v~d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 252 (347)
.||+|+..... ..+.++.+.|+++|++++...
T Consensus 186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 186 QFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred CccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 79999864332 245778899999999998753
No 448
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.68 E-value=0.52 Score=41.48 Aligned_cols=39 Identities=18% Similarity=0.281 Sum_probs=34.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
-++|.|+|+ |.+|...++.+...|.+|++.+.++++.+.
T Consensus 4 ~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 4 IKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred cCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 368999999 999999999998899999999999887654
No 449
>PLN00016 RNA-binding protein; Provisional
Probab=95.67 E-value=0.086 Score=48.20 Aligned_cols=95 Identities=21% Similarity=0.203 Sum_probs=61.5
Q ss_pred CCEEEEe----cCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-----------HHhcCCcEEEeCCCCCchhhHHHHH
Q 019049 150 GQVLLVL----GAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF-----------LKSLGVDHVVDLSNESVIPSVKEFL 214 (347)
Q Consensus 150 ~~~VlI~----g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~-----------~~~~g~~~v~~~~~~~~~~~~~~~~ 214 (347)
..+|||+ |++|-+|..++..+...|.+|++++++..+... +...|...+. . +. ..+.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~---D~----~d~~ 123 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G---DP----ADVK 123 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e---cH----HHHH
Confidence 4689999 999999999999998899999999987654221 1123333222 1 11 1122
Q ss_pred HHhcCCcccEEEeCCCcc--chHHHHhccccCC--EEEEEee
Q 019049 215 KARKLKGVDVLYDPVGGK--LTKESLKLLNWGA--QILVIGF 252 (347)
Q Consensus 215 ~~~~~~~~d~v~d~~g~~--~~~~~~~~l~~~G--~~v~~g~ 252 (347)
......++|+|+++.+.. ....+++.++..| +++.++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 222345799999998753 2345566665443 7887664
No 450
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.66 E-value=0.041 Score=46.71 Aligned_cols=106 Identities=15% Similarity=0.270 Sum_probs=65.6
Q ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH----hcCCcEEEeCCCCCchhhHHHHH
Q 019049 141 LVHRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK----SLGVDHVVDLSNESVIPSVKEFL 214 (347)
Q Consensus 141 l~~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~~~ 214 (347)
+....++.||++|+=.|. |.|.++..+++..| .+|+..+.++++.+.++ ..|....+.....++ .+.-.
T Consensus 32 I~~~l~i~pG~~VlEaGt--GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv---~~~g~ 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGT--GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDV---CEEGF 106 (247)
T ss_dssp HHHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-G---GCG--
T ss_pred HHHHcCCCCCCEEEEecC--CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecce---ecccc
Confidence 446789999999998875 56788888888876 39999999999887774 355432222222222 00000
Q ss_pred HHhcCCcccEEEeCCCc--cchHHHHhcc-ccCCEEEEEe
Q 019049 215 KARKLKGVDVLYDPVGG--KLTKESLKLL-NWGAQILVIG 251 (347)
Q Consensus 215 ~~~~~~~~d~v~d~~g~--~~~~~~~~~l-~~~G~~v~~g 251 (347)
..--...+|.||-=.+. ..+..+.+.| +++|+++.+.
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEE
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC
Confidence 00012468888755554 5678999999 8999999874
No 451
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.66 E-value=0.11 Score=46.42 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=47.5
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHH-hcCC--cEEE--eCCCCCchhhHHHHHHHhcCCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCG--ATIIAVARGAEKIKFLK-SLGV--DHVV--DLSNESVIPSVKEFLKARKLKG 221 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g--~~V~~~~~~~~~~~~~~-~~g~--~~v~--~~~~~~~~~~~~~~~~~~~~~~ 221 (347)
.+++|||+|++|.+|..+++.+...| .+|++++++..+...+. .+.. ..++ |..+ .+.+.... .+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d------~~~l~~~~--~~ 74 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD------KERLTRAL--RG 74 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC------HHHHHHHH--hc
Confidence 46899999999999999998877765 68998887765443332 2221 1122 2222 12222222 25
Q ss_pred ccEEEeCCCc
Q 019049 222 VDVLYDPVGG 231 (347)
Q Consensus 222 ~d~v~d~~g~ 231 (347)
+|++|.++|.
T Consensus 75 iD~Vih~Ag~ 84 (324)
T TIGR03589 75 VDYVVHAAAL 84 (324)
T ss_pred CCEEEECccc
Confidence 8999998873
No 452
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.66 E-value=0.13 Score=44.58 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=67.9
Q ss_pred cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
..||+.......| +..++ -.|++|+|.|.+..+|.-++.++...|++|++..+. ..+
T Consensus 137 ~~PcTp~aii~lL-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~-- 194 (285)
T PRK14189 137 FRPCTPYGVMKML-ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRD-- 194 (285)
T ss_pred CcCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCC--
Confidence 4566655555544 33343 379999999998888999999999999999875331 111
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+++.+ ...|+++-++|.+.+-. -++++++..++.+|...
T Consensus 195 --l~~~~-----~~ADIVV~avG~~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 195 --LAAHT-----RQADIVVAAVGKRNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred --HHHHh-----hhCCEEEEcCCCcCccC-HHHcCCCCEEEEccccc
Confidence 12221 46799999999865522 28999999999998553
No 453
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.65 E-value=0.21 Score=43.19 Aligned_cols=97 Identities=16% Similarity=0.222 Sum_probs=68.5
Q ss_pred ccCcchHHHHHHHHHHhcCCC-CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 128 AALPVAFGTSHVALVHRAQLS-SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~~-~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
+..||+....+.-| +..++. .|++|+|.|.+..+|.-++.++...|++|++.......
T Consensus 135 ~~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~-------------------- 193 (285)
T PRK14191 135 GFVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD-------------------- 193 (285)
T ss_pred CCCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH--------------------
Confidence 34566666656555 344443 69999999997799999999999999999876432111
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+.+. + ..+|+++-++|.+.+-. -++++++..++.+|...
T Consensus 194 ---l~~~---~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 194 ---LSFY---T--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred ---HHHH---H--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 1111 1 46799999999876522 45779999999998643
No 454
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.63 E-value=0.044 Score=46.19 Aligned_cols=73 Identities=25% Similarity=0.389 Sum_probs=49.7
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCCcE-EEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGVDH-VVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
|||.||+|-+|..++..+...|.+|+.+.++..+...... ..... ..|..+.+. .+++.+ ...+|.||.+++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~---~~~~~~---~~~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQ---LEKLLE---KANIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHH---HHHHHH---HHTESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccc---cccccc---ccCceEEEEeec
Confidence 7999999999999999999999999988887765544432 23221 223332211 333333 337899999887
Q ss_pred c
Q 019049 231 G 231 (347)
Q Consensus 231 ~ 231 (347)
.
T Consensus 75 ~ 75 (236)
T PF01370_consen 75 F 75 (236)
T ss_dssp S
T ss_pred c
Confidence 5
No 455
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.63 E-value=0.057 Score=50.65 Aligned_cols=70 Identities=33% Similarity=0.451 Sum_probs=48.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hH----HHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KI----KFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~----~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
.+++|+|+|+ |.+|+.++..+...|++|++++.+.. .. +.+.+.|..... .+..+ . ..+++|
T Consensus 4 ~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~~~------~-----~~~~~d 70 (450)
T PRK14106 4 KGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVL-GEYPE------E-----FLEGVD 70 (450)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCcch------h-----HhhcCC
Confidence 4689999999 77999999999999999999998742 22 333445654222 11111 1 124689
Q ss_pred EEEeCCCc
Q 019049 224 VLYDPVGG 231 (347)
Q Consensus 224 ~v~d~~g~ 231 (347)
+|+.++|.
T Consensus 71 ~vv~~~g~ 78 (450)
T PRK14106 71 LVVVSPGV 78 (450)
T ss_pred EEEECCCC
Confidence 99999885
No 456
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.62 E-value=0.16 Score=44.01 Aligned_cols=95 Identities=20% Similarity=0.213 Sum_probs=69.2
Q ss_pred cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
..||+....+..+ +..++ -.|++++|.|-+..+|.-++.++...|++|++..+.-. +
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~-------------------~-- 195 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK-------------------N-- 195 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC-------------------C--
Confidence 4577666666555 33444 26999999999888999999999999999988765311 1
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeec
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~ 253 (347)
+++.. ..+|+++.++|.+.+-. -++++++..++.+|..
T Consensus 196 --l~~~~-----~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin 233 (285)
T PRK10792 196 --LRHHV-----RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGIN 233 (285)
T ss_pred --HHHHH-----hhCCEEEEcCCCccccc-HHHcCCCcEEEEcccc
Confidence 12111 46899999999866522 3889999999999854
No 457
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.61 E-value=0.2 Score=38.57 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=66.7
Q ss_pred cCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCch
Q 019049 129 ALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVI 207 (347)
Q Consensus 129 ~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 207 (347)
.+|+........+. ..++ -.|++|+|+|-+..+|.-++.++...|++|+...+... +
T Consensus 7 ~~p~t~~a~~~ll~-~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------------~-- 64 (140)
T cd05212 7 FVSPVAKAVKELLN-KEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------------Q-- 64 (140)
T ss_pred ccccHHHHHHHHHH-HcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------------C--
Confidence 34555554454443 3343 36899999999999999999999999999998875321 1
Q ss_pred hhHHHHHHHhcCCcccEEEeCCCccchHHHHhccccCCEEEEEeecC
Q 019049 208 PSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 254 (347)
+++.. ...|+++-++|.+.+ ---++++++-.++.+|...
T Consensus 65 --l~~~v-----~~ADIVvsAtg~~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 65 --LQSKV-----HDADVVVVGSPKPEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred --HHHHH-----hhCCEEEEecCCCCc-cCHHHcCCCCEEEEcCCCc
Confidence 11111 467999999997633 2247899999888776544
No 458
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.14 Score=44.90 Aligned_cols=35 Identities=31% Similarity=0.371 Sum_probs=31.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecCh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGAT-IIAVARGA 184 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~-V~~~~~~~ 184 (347)
.+++++|.|+ |++|.+++..+...|++ |+++.++.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 5789999999 89999999888899995 99999985
No 459
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.60 E-value=0.094 Score=43.66 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=28.3
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEec
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVAR 182 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~ 182 (347)
...+|+|.|. |++|.+++..+-+.|. +++.++.
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEec
Confidence 4569999999 9999999999999998 7776654
No 460
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.59 E-value=0.17 Score=44.63 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=38.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV 195 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~ 195 (347)
+|.|+|. |.+|...+..+...|.+|++.++++++.+.+.+.|+
T Consensus 2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC
Confidence 5889998 999999988888889999999999999888877664
No 461
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.59 E-value=0.16 Score=41.93 Aligned_cols=108 Identities=22% Similarity=0.270 Sum_probs=76.7
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH----HhcCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFL----KSLGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
...++...++++.+|.=.|-+.++..++--.+.+|++++.+++..+.. +..|.++-++.......+.+.+.....+
T Consensus 67 ~li~~~~ak~~lelGvfTGySaL~~Alalp~dGrv~a~eid~~~~~~~~~~~k~agv~~KI~~i~g~a~esLd~l~~~~~ 146 (237)
T KOG1663|consen 67 MLIRLLNAKRTLELGVFTGYSALAVALALPEDGRVVAIEIDADAYEIGLELVKLAGVDHKITFIEGPALESLDELLADGE 146 (237)
T ss_pred HHHHHhCCceEEEEecccCHHHHHHHHhcCCCceEEEEecChHHHHHhHHHHHhccccceeeeeecchhhhHHHHHhcCC
Confidence 345556778899998755444444444444578999999988855444 4577888888777766666777776666
Q ss_pred CCcccEEEeCCCc----cchHHHHhccccCCEEEEE
Q 019049 219 LKGVDVLYDPVGG----KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 219 ~~~~d~v~d~~g~----~~~~~~~~~l~~~G~~v~~ 250 (347)
.+.||.+|--.-- ..+..+++++++||.++.=
T Consensus 147 ~~tfDfaFvDadK~nY~~y~e~~l~Llr~GGvi~~D 182 (237)
T KOG1663|consen 147 SGTFDFAFVDADKDNYSNYYERLLRLLRVGGVIVVD 182 (237)
T ss_pred CCceeEEEEccchHHHHHHHHHHHhhcccccEEEEe
Confidence 7789999844432 3457899999999998863
No 462
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.59 E-value=0.033 Score=39.75 Aligned_cols=85 Identities=28% Similarity=0.314 Sum_probs=56.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcC---CEEEEE-ecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEE
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCG---ATIIAV-ARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLY 226 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g---~~V~~~-~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~ 226 (347)
+|.|.|+ |.+|.+.++-+...| .+|+.. .+++++.+.+. +++...+.. + ..++.+ ..|++|
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-~-------~~~~~~-----~advvi 66 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-D-------NEEAAQ-----EADVVI 66 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-E-------HHHHHH-----HTSEEE
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-C-------hHHhhc-----cCCEEE
Confidence 5788888 999999999999999 789955 99999887774 566443321 1 222222 569999
Q ss_pred eCCCccchHHHHhc---cccCCEEEEE
Q 019049 227 DPVGGKLTKESLKL---LNWGAQILVI 250 (347)
Q Consensus 227 d~~g~~~~~~~~~~---l~~~G~~v~~ 250 (347)
-|+....+...++. ..++..++.+
T Consensus 67 lav~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp E-S-GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred EEECHHHHHHHHHHHhhccCCCEEEEe
Confidence 99998776655543 4455555554
No 463
>PLN03075 nicotianamine synthase; Provisional
Probab=95.59 E-value=0.14 Score=44.54 Aligned_cols=95 Identities=14% Similarity=0.177 Sum_probs=64.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHhcC-----CcEEEeCCCCCchhhHHHHHHHh-cCC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVC--GATIIAVARGAEKIKFLKSLG-----VDHVVDLSNESVIPSVKEFLKAR-KLK 220 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~--g~~V~~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~~~~~~-~~~ 220 (347)
+.++|+-+|. |+.|+.++-+++.+ +.+++.++.+++..+.+++.- ...-+.....+. .+.. ...
T Consensus 123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da-------~~~~~~l~ 194 (296)
T PLN03075 123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADV-------MDVTESLK 194 (296)
T ss_pred CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECch-------hhcccccC
Confidence 7789999999 88888888777654 458999999999887776522 111111221221 1111 135
Q ss_pred cccEEEeCC------Cc--cchHHHHhccccCCEEEEEe
Q 019049 221 GVDVLYDPV------GG--KLTKESLKLLNWGAQILVIG 251 (347)
Q Consensus 221 ~~d~v~d~~------g~--~~~~~~~~~l~~~G~~v~~g 251 (347)
+||+||..+ .. ..+..+.+.|+++|.++.-.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799998765 22 35688899999999998753
No 464
>PLN02366 spermidine synthase
Probab=95.59 E-value=0.13 Score=45.44 Aligned_cols=101 Identities=18% Similarity=0.135 Sum_probs=59.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHh-cCC-cEEEeCCCCCc-hhhHHHHHHHhcCCccc
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLKS-LGV-DHVVDLSNESV-IPSVKEFLKARKLKGVD 223 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~~-~g~-~~v~~~~~~~~-~~~~~~~~~~~~~~~~d 223 (347)
.+.++|||+|+ |. |.++..++++.+. +|++++.+++-.+.+++ +.. ...++.....+ .......++.+..+.||
T Consensus 90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 45689999998 43 6677778887664 89999988876666665 221 00011000000 00012233333345799
Q ss_pred EEEeCCCc-----------cchHHHHhccccCCEEEEE
Q 019049 224 VLYDPVGG-----------KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 224 ~v~d~~g~-----------~~~~~~~~~l~~~G~~v~~ 250 (347)
+||.-... +.++.+.++|+++|.++.-
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 99853322 1356788999999999764
No 465
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=95.57 E-value=0.12 Score=44.23 Aligned_cols=39 Identities=33% Similarity=0.406 Sum_probs=31.9
Q ss_pred EEEEecCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHH
Q 019049 152 VLLVLGAAGGVGVAAVQIGKV----CGATIIAVARGAEKIKFL 190 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~----~g~~V~~~~~~~~~~~~~ 190 (347)
.++|.|+++++|..++..+.. .|++|+++.++.++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~ 44 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQL 44 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHH
Confidence 589999999999988765543 699999999988776554
No 466
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.55 E-value=0.11 Score=44.82 Aligned_cols=81 Identities=21% Similarity=0.211 Sum_probs=49.2
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHH-Hhc----CCc-E--EEeCCCCCc-hhhHHHHHHHh--c
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG-AEKIKFL-KSL----GVD-H--VVDLSNESV-IPSVKEFLKAR--K 218 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~-~~~~~~~-~~~----g~~-~--v~~~~~~~~-~~~~~~~~~~~--~ 218 (347)
.+++|.|+++++|...++.+...|++|+++.+. .++.+.+ +++ +.. . ..|..+.+. .+..+++.+.. .
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999999999999988653 3443332 222 211 1 223333321 11123333221 2
Q ss_pred CCcccEEEeCCCc
Q 019049 219 LKGVDVLYDPVGG 231 (347)
Q Consensus 219 ~~~~d~v~d~~g~ 231 (347)
.+++|++++++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 3479999999873
No 467
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.55 E-value=0.052 Score=48.30 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=33.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEK 186 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~ 186 (347)
.+++|||+|++|.+|..++..+...|.+|++++++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 36799999999999999999999999999998887653
No 468
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.53 E-value=0.085 Score=46.35 Aligned_cols=75 Identities=28% Similarity=0.361 Sum_probs=52.2
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhH---HHHHhcC-Cc---E--EEeCCCCCchhhHHHHHHHhcC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKI---KFLKSLG-VD---H--VVDLSNESVIPSVKEFLKARKL 219 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~---~~~~~~g-~~---~--v~~~~~~~~~~~~~~~~~~~~~ 219 (347)
.+.+|+|.||+|-+|...+..+...|++|.+++|++++. +.++++. +. . .-|..+.+. +....
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~s------f~~ai-- 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGS------FDKAI-- 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccch------HHHHH--
Confidence 567999999999999999999999999999999998863 2455544 21 1 112222221 22222
Q ss_pred CcccEEEeCCCc
Q 019049 220 KGVDVLYDPVGG 231 (347)
Q Consensus 220 ~~~d~v~d~~g~ 231 (347)
.|+|.||-++..
T Consensus 77 ~gcdgVfH~Asp 88 (327)
T KOG1502|consen 77 DGCDGVFHTASP 88 (327)
T ss_pred hCCCEEEEeCcc
Confidence 468999887764
No 469
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.50 E-value=0.1 Score=43.97 Aligned_cols=76 Identities=33% Similarity=0.402 Sum_probs=47.0
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecCh-hhHH----HHHhcCCc-EEE--eCCCCCchhhHHHHHHHh--cCCcc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGA-EKIK----FLKSLGVD-HVV--DLSNESVIPSVKEFLKAR--KLKGV 222 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~-~~~~----~~~~~g~~-~v~--~~~~~~~~~~~~~~~~~~--~~~~~ 222 (347)
+||+|++|++|..+++.+...|++|++++++. ++.+ .++..|.. ..+ |..+.. ++++..... ....+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~~~i 77 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDRE---DVKAVVEEIEEELGPI 77 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHH---HHHHHHHHHHHHhCCC
Confidence 58999999999999999988999999998764 2222 22334432 122 322222 122222211 12468
Q ss_pred cEEEeCCCc
Q 019049 223 DVLYDPVGG 231 (347)
Q Consensus 223 d~v~d~~g~ 231 (347)
|.++.+.|.
T Consensus 78 d~vi~~ag~ 86 (239)
T TIGR01830 78 DILVNNAGI 86 (239)
T ss_pred CEEEECCCC
Confidence 999998884
No 470
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.50 E-value=0.77 Score=39.26 Aligned_cols=97 Identities=13% Similarity=0.142 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCC-cEEEeCCCCCchhhHHHHHHHhcCCccc
Q 019049 145 AQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGV-DHVVDLSNESVIPSVKEFLKARKLKGVD 223 (347)
Q Consensus 145 ~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~d 223 (347)
....++.+||-.|+ |. |..+..+++ .|.+|++++.+++..+.+++... ...+..+...+ ......||
T Consensus 38 l~~~~~~~vLDiGc-G~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~---------~~~~~~fD 105 (251)
T PRK10258 38 LPQRKFTHVLDAGC-GP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESL---------PLATATFD 105 (251)
T ss_pred cCccCCCeEEEeeC-CC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccC---------cCCCCcEE
Confidence 33345779999998 32 555555544 68899999999998888876432 22222111111 01234699
Q ss_pred EEEeCCC-----c--cchHHHHhccccCCEEEEEeec
Q 019049 224 VLYDPVG-----G--KLTKESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 224 ~v~d~~g-----~--~~~~~~~~~l~~~G~~v~~g~~ 253 (347)
+|+.... + ..+.++.+.|+++|.++.....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~ 142 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLV 142 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9986543 1 3467788999999999986543
No 471
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=95.48 E-value=0.14 Score=43.43 Aligned_cols=34 Identities=29% Similarity=0.298 Sum_probs=30.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~ 184 (347)
++++|.|++|++|..+++.+...|++|++++++.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 4899999999999999998888899999998874
No 472
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.47 E-value=0.048 Score=47.63 Aligned_cols=95 Identities=8% Similarity=0.152 Sum_probs=58.8
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcE-EEeCCCCCchhhHHHHHHHh-cCCc-ccEEEeC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDH-VVDLSNESVIPSVKEFLKAR-KLKG-VDVLYDP 228 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~~~~-~~~~-~d~v~d~ 228 (347)
+|+|.|++|.+|..+++.+...|.+|.++++++++.. ..+... ..|+.+.+. +....+.. .-.+ +|.+|-+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~---l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDT---WDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHH---HHHHHhcccCcCCceeEEEEe
Confidence 4899999999999999999889999999999876532 223221 234443322 22222111 1135 8999877
Q ss_pred CCcc-----chHHHHhccccCC--EEEEEee
Q 019049 229 VGGK-----LTKESLKLLNWGA--QILVIGF 252 (347)
Q Consensus 229 ~g~~-----~~~~~~~~l~~~G--~~v~~g~ 252 (347)
.+.. ....+++.++..| ++|.++.
T Consensus 75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 6631 2334555555554 6777654
No 473
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.47 E-value=0.038 Score=54.44 Aligned_cols=75 Identities=20% Similarity=0.431 Sum_probs=52.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh---------------------hHHHHHhcCCcEEEeCCC-CCc
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE---------------------KIKFLKSLGVDHVVDLSN-ESV 206 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~---------------------~~~~~~~~g~~~v~~~~~-~~~ 206 (347)
.+++|+|+|+ |+.|+.++..+...|++|+++++.+. +.+.++++|.+...+..- .+.
T Consensus 326 ~~~~VaIIGa-GpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGA-GPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 5789999999 99999999999999999999987532 345567778654443221 111
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
..+.. ...||.+|.++|.
T Consensus 405 --~~~~~-----~~~~DavilAtGa 422 (654)
T PRK12769 405 --SLESL-----LEDYDAVFVGVGT 422 (654)
T ss_pred --CHHHH-----HhcCCEEEEeCCC
Confidence 01211 1369999999885
No 474
>PLN00203 glutamyl-tRNA reductase
Probab=95.47 E-value=0.14 Score=48.47 Aligned_cols=72 Identities=22% Similarity=0.359 Sum_probs=50.7
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
+.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+. +++...+ ... . ........ ..+|+||.
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~--~----~~dl~~al--~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYK--P----LDEMLACA--AEADVVFT 335 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eee--c----HhhHHHHH--hcCCEEEE
Confidence 679999999 9999999999999997 7999999998876665 4532111 110 1 11122222 46899999
Q ss_pred CCCc
Q 019049 228 PVGG 231 (347)
Q Consensus 228 ~~g~ 231 (347)
|++.
T Consensus 336 AT~s 339 (519)
T PLN00203 336 STSS 339 (519)
T ss_pred ccCC
Confidence 9876
No 475
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.43 E-value=0.16 Score=44.32 Aligned_cols=95 Identities=23% Similarity=0.273 Sum_probs=67.2
Q ss_pred ccCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHhcCCcEEEeCCCCC
Q 019049 128 AALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVA-RGAEKIKFLKSLGVDHVVDLSNES 205 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~-~~~~~~~~~~~~g~~~v~~~~~~~ 205 (347)
..+||+....+..|. ..++ -.|++|+|+|-++.+|.-++.++...|+.|++.. ++++
T Consensus 136 ~~~PcTp~ai~~ll~-~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLR-RVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHH-HhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC--------------------
Confidence 346776666665553 3343 4799999999889999999999999999999884 4321
Q ss_pred chhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEeecC
Q 019049 206 VIPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFAS 254 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~~ 254 (347)
.++.. ...|+|+-++|.+.+ .. .+++++..++.+|...
T Consensus 195 ----l~e~~-----~~ADIVIsavg~~~~v~~--~~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 ----LPAVC-----RRADILVAAVGRPEMVKG--DWIKPGATVIDVGINR 233 (296)
T ss_pred ----HHHHH-----hcCCEEEEecCChhhcch--heecCCCEEEEcCCcc
Confidence 11111 357999999997543 33 3489999999988643
No 476
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.41 E-value=0.42 Score=39.76 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=60.4
Q ss_pred HhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh----cCCcEEEeCCCCCchhhHHHHHHHhc
Q 019049 143 HRAQLSSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS----LGVDHVVDLSNESVIPSVKEFLKARK 218 (347)
Q Consensus 143 ~~~~~~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~~~~~~~ 218 (347)
...+++++++||-.|+ +.|..+..+++. +.+|+.++.+++..+.+++ .|...+ +....+. .+. ...
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~-~~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d~---~~~---~~~ 141 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHL-VRRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGDG---WKG---WPA 141 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHH-hCEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECCc---ccC---CCc
Confidence 5677889999999997 335555555554 3589999998876655543 343221 1111111 000 011
Q ss_pred CCcccEEEeCCCc-cchHHHHhccccCCEEEEE
Q 019049 219 LKGVDVLYDPVGG-KLTKESLKLLNWGAQILVI 250 (347)
Q Consensus 219 ~~~~d~v~d~~g~-~~~~~~~~~l~~~G~~v~~ 250 (347)
...||.|+..... .....+.+.|+++|+++..
T Consensus 142 ~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 142 YAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred CCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 2579998865543 3346678999999998865
No 477
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=95.39 E-value=0.14 Score=40.56 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=29.1
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCC-EEEEEecChh
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGA-TIIAVARGAE 185 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~-~V~~~~~~~~ 185 (347)
.+++|.|++|++|..++..+...|+ .|+.+.+++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 3689999999999999998888887 6777777654
No 478
>PRK12320 hypothetical protein; Provisional
Probab=95.38 E-value=0.68 Score=45.58 Aligned_cols=90 Identities=19% Similarity=0.183 Sum_probs=55.3
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
+|||+|++|-+|..+++.+...|.+|+++++.+... ...+.+.+. |..+. .+.+.. .++|+||.+++
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~-------~l~~al--~~~D~VIHLAa 69 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNP-------VLQELA--GEADAVIHLAP 69 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCH-------HHHHHh--cCCCEEEEcCc
Confidence 699999999999999999999999999999765421 111222221 11111 122222 36899999987
Q ss_pred ccc----------hHHHHhccccCC-EEEEEeec
Q 019049 231 GKL----------TKESLKLLNWGA-QILVIGFA 253 (347)
Q Consensus 231 ~~~----------~~~~~~~l~~~G-~~v~~g~~ 253 (347)
... ..++++.++..| +++.++..
T Consensus 70 ~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 70 VDTSAPGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred cCccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 421 223455554444 77766643
No 479
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.38 E-value=0.12 Score=45.73 Aligned_cols=87 Identities=23% Similarity=0.298 Sum_probs=60.1
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.|++|.|+|. |.+|...++.++.+|.+|++.+++..+.. +...+. ...+ +++++ ...|+|+.+
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~~~~----l~e~l-----~~aDvvv~~ 197 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--GREE----LSAFL-----SQTRVLINL 197 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--cccc----HHHHH-----hcCCEEEEC
Confidence 5789999999 99999999999999999999987654321 222111 1111 22222 356999888
Q ss_pred CCc-c----ch-HHHHhccccCCEEEEEee
Q 019049 229 VGG-K----LT-KESLKLLNWGAQILVIGF 252 (347)
Q Consensus 229 ~g~-~----~~-~~~~~~l~~~G~~v~~g~ 252 (347)
... + .+ ...++.|+++..++.++.
T Consensus 198 lPlt~~T~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 198 LPNTPETVGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CCCCHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence 874 2 22 457889999988887763
No 480
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.38 E-value=0.075 Score=46.91 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=59.1
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchh---hHHHHHHHhcCCcccEEEeC
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIP---SVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~~~~~~~~~~~~d~v~d~ 228 (347)
+|+|+|+ |.+|.+.+..+...|.+|+++++++++.+.+++.|... + +.+... ...... ....+|++|-|
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~---~~~~~d~vila 73 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRL--E--DGEITVPVLAADDPA---ELGPQDLVILA 73 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcc--c--CCceeecccCCCChh---HcCCCCEEEEe
Confidence 5899999 99999999888888999999999888777777666421 1 000000 000000 11578999999
Q ss_pred CCccchHHHHhcc----ccCCEEEEEe
Q 019049 229 VGGKLTKESLKLL----NWGAQILVIG 251 (347)
Q Consensus 229 ~g~~~~~~~~~~l----~~~G~~v~~g 251 (347)
+.......++..+ .++..++.+.
T Consensus 74 ~k~~~~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 74 VKAYQLPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred cccccHHHHHHHHhhhcCCCCEEEEec
Confidence 9875555544433 3444566543
No 481
>PRK06924 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.16 Score=43.22 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=31.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecCh
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGA 184 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~ 184 (347)
++++|.|++|++|...++.+...|++|+++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 4799999999999999999988999999999876
No 482
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.36 E-value=0.69 Score=40.53 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=34.8
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~ 191 (347)
++|.|+|+ |.+|...++.+...|.+|++.+.++++.+.++
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 57999999 99999999998888999999999988766553
No 483
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.35 E-value=0.23 Score=43.87 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=65.5
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHH-cCC-EEEEEecChhhHHHHH-hcCCc--EEEeCCCCCchhhHHHHHHHhcCCcc
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKV-CGA-TIIAVARGAEKIKFLK-SLGVD--HVVDLSNESVIPSVKEFLKARKLKGV 222 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~-~g~-~V~~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~~~~~~~~~~~ 222 (347)
....+++|+|+ |..|.+.+..+.. .+. +|.+..+++++.+.+. ++... .+. . .+ .++.. ..+
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~--~~----~~~av-----~~a 189 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P--LD----GEAIP-----EAV 189 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E--CC----HHHHh-----hcC
Confidence 35679999999 9999998888764 565 7999999988766543 34311 111 1 11 22222 478
Q ss_pred cEEEeCCCc--cchHHHHhccccCCEEEEEeecCCCCCCcc
Q 019049 223 DVLYDPVGG--KLTKESLKLLNWGAQILVIGFASGEIPVIP 261 (347)
Q Consensus 223 d~v~d~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 261 (347)
|+|+.|+++ +.+.. .++++-.+..+|.........+
T Consensus 190 DiVitaT~s~~Pl~~~---~~~~g~hi~~iGs~~p~~~El~ 227 (304)
T PRK07340 190 DLVVTATTSRTPVYPE---AARAGRLVVAVGAFTPDMAELA 227 (304)
T ss_pred CEEEEccCCCCceeCc---cCCCCCEEEecCCCCCCcccCC
Confidence 999999886 44543 3788889998887765444444
No 484
>PLN02240 UDP-glucose 4-epimerase
Probab=95.33 E-value=0.12 Score=46.54 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=30.6
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARG 183 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~ 183 (347)
+++|+|.|++|.+|..+++.+...|++|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999988889999998754
No 485
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.33 E-value=0.13 Score=48.29 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=59.9
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.|++|||+|| |.++.-=++.+...|++|++++..-. +...+.+.|.- .+....+. ... -.++++||-
T Consensus 11 ~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i---~~~~~~~~---~~d-----l~~~~lv~~ 78 (457)
T PRK10637 11 RDRDCLLVGG-GDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGML---TLVEGPFD---ESL-----LDTCWLAIA 78 (457)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCE---EEEeCCCC---hHH-----hCCCEEEEE
Confidence 5789999999 88888777777778999999876432 23333333321 22222331 111 147899999
Q ss_pred CCCccch-HHHHhccccCCEEEEEeec
Q 019049 228 PVGGKLT-KESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 228 ~~g~~~~-~~~~~~l~~~G~~v~~g~~ 253 (347)
+++++.+ ..+....+..|.++.+...
T Consensus 79 at~d~~~n~~i~~~a~~~~~lvN~~d~ 105 (457)
T PRK10637 79 ATDDDAVNQRVSEAAEARRIFCNVVDA 105 (457)
T ss_pred CCCCHHHhHHHHHHHHHcCcEEEECCC
Confidence 9998655 4566677777888776543
No 486
>PLN02686 cinnamoyl-CoA reductase
Probab=95.33 E-value=0.16 Score=46.23 Aligned_cols=44 Identities=18% Similarity=0.190 Sum_probs=36.8
Q ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 019049 148 SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK 191 (347)
Q Consensus 148 ~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~ 191 (347)
..+++|||+|++|.+|..++..+...|++|+++.++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45789999999999999999999999999998888766544443
No 487
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.32 E-value=0.15 Score=49.55 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=70.3
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
++|+|.|. |.+|...++.++..|.++++++.++++.+.+++.|...++ .+.. ..+.++..+-..+|.++-+++
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat-----~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDAT-----QLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCC-----CHHHHHhcCCccCCEEEEEeC
Confidence 58999999 9999999999999999999999999999999998865433 2222 235666667778999999998
Q ss_pred ccchH----HHHhccccCCEEEEE
Q 019049 231 GKLTK----ESLKLLNWGAQILVI 250 (347)
Q Consensus 231 ~~~~~----~~~~~l~~~G~~v~~ 250 (347)
++..+ ...+...|.-+++..
T Consensus 474 d~~~n~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 474 EPEDTMKIVELCQQHFPHLHILAR 497 (601)
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEE
Confidence 74332 234555666666654
No 488
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.29 E-value=0.059 Score=47.07 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=42.6
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+|||.|++|.+|..+++.+...|.+|++++++. .|..+ .+.+.....+..+|+|+++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~--------------~d~~~------~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ--------------LDLTD------PEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc--------------cCCCC------HHHHHHHHHhCCCCEEEECCcc
Confidence 489999999999999999998999999998741 12222 1222233333457999988863
No 489
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.29 E-value=0.17 Score=45.30 Aligned_cols=96 Identities=21% Similarity=0.105 Sum_probs=64.7
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEE-eC-C--C-CCchhhHHHHHHHhcCCcccEE
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVV-DL-S--N-ESVIPSVKEFLKARKLKGVDVL 225 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~-~~-~--~-~~~~~~~~~~~~~~~~~~~d~v 225 (347)
-+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+...+.+... .. . . ........+. . ...|+|
T Consensus 5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~---~--~~aD~V 78 (328)
T PRK14618 5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEA---L--AGADFA 78 (328)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHH---H--cCCCEE
Confidence 37999999 9999999999988999999999988877777654311100 00 0 0 0000001111 1 367999
Q ss_pred EeCCCccchHHHHhccccCCEEEEEee
Q 019049 226 YDPVGGKLTKESLKLLNWGAQILVIGF 252 (347)
Q Consensus 226 ~d~~g~~~~~~~~~~l~~~G~~v~~g~ 252 (347)
+-|+.+......+..++++-.++.+..
T Consensus 79 i~~v~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred EEECchHHHHHHHHhcCcCCEEEEEee
Confidence 999998777888888888766666643
No 490
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.28 E-value=0.15 Score=48.14 Aligned_cols=70 Identities=19% Similarity=0.269 Sum_probs=49.8
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-hcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLK-SLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.+++++|.|+ |++|.+++..+...|++|++..++.++.+.+. .++.. .++.. ... .-..+|++++
T Consensus 331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---------~~~---~l~~~DiVIn 396 (477)
T PRK09310 331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---------SLP---ELHRIDIIIN 396 (477)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---------Hhc---ccCCCCEEEE
Confidence 4679999998 99999999999999999999999887766554 33321 11111 110 1246899999
Q ss_pred CCCcc
Q 019049 228 PVGGK 232 (347)
Q Consensus 228 ~~g~~ 232 (347)
|++..
T Consensus 397 atP~g 401 (477)
T PRK09310 397 CLPPS 401 (477)
T ss_pred cCCCC
Confidence 98753
No 491
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.28 E-value=0.21 Score=44.11 Aligned_cols=44 Identities=20% Similarity=0.270 Sum_probs=38.0
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVD 196 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~ 196 (347)
+|.|+|. |.+|...++-+...|.+|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCe
Confidence 5889998 9999999888888899999999999988887777643
No 492
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.27 E-value=0.26 Score=43.08 Aligned_cols=95 Identities=17% Similarity=0.200 Sum_probs=67.3
Q ss_pred ccCcchHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCc
Q 019049 128 AALPVAFGTSHVALVHRAQL-SSGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESV 206 (347)
Q Consensus 128 a~l~~~~~~a~~~l~~~~~~-~~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 206 (347)
..+||+......-|. ..++ -.|++|.|+|.++.+|.-.+.++...|++|++..+... +
T Consensus 137 ~~~PcTp~aii~lL~-~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------~- 195 (301)
T PRK14194 137 VLTPCTPSGCLRLLE-DTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------D- 195 (301)
T ss_pred CCCCCcHHHHHHHHH-HhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------C-
Confidence 345666665555553 3343 36999999999779999999999999999999865422 1
Q ss_pred hhhHHHHHHHhcCCcccEEEeCCCccch-HHHHhccccCCEEEEEeec
Q 019049 207 IPSVKEFLKARKLKGVDVLYDPVGGKLT-KESLKLLNWGAQILVIGFA 253 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~v~d~~g~~~~-~~~~~~l~~~G~~v~~g~~ 253 (347)
.++.. ...|+|+-++|.+.+ ... +++++..++.+|..
T Consensus 196 ---l~e~~-----~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin 233 (301)
T PRK14194 196 ---AKALC-----RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN 233 (301)
T ss_pred ---HHHHH-----hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence 22222 357999999997543 332 38999999998854
No 493
>PRK08309 short chain dehydrogenase; Provisional
Probab=95.26 E-value=1.3 Score=35.74 Aligned_cols=90 Identities=16% Similarity=0.058 Sum_probs=52.9
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHh-cCC---cEE--EeCCCCCchhhHHHHHHHh--cCCccc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKS-LGV---DHV--VDLSNESVIPSVKEFLKAR--KLKGVD 223 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~-~g~---~~v--~~~~~~~~~~~~~~~~~~~--~~~~~d 223 (347)
+++|.|++ ++|..+++.+...|++|+++.+++++.+.+.. ++. ... .|..+.+- +....+.. ..+++|
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~s---v~~~i~~~l~~~g~id 77 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDA---LKLAIKSTIEKNGPFD 77 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHH---HHHHHHHHHHHcCCCe
Confidence 58999996 56656777777789999999998876655433 321 111 23333222 23333221 234789
Q ss_pred EEEeCCCccchHHHHhccccCC
Q 019049 224 VLYDPVGGKLTKESLKLLNWGA 245 (347)
Q Consensus 224 ~v~d~~g~~~~~~~~~~l~~~G 245 (347)
.+|+.+-...-.......+..|
T Consensus 78 ~lv~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 78 LAVAWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EEEEeccccchhhHHHHHHHHc
Confidence 9998876554444444444444
No 494
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.23 E-value=0.22 Score=39.05 Aligned_cols=86 Identities=24% Similarity=0.266 Sum_probs=57.7
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEe
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAE-KIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYD 227 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d 227 (347)
.+++|.|+|- |+-|.+.++-+|-.|.+|++..+..+ ..+.+++.|+... + ..+.. ...|+|+-
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~------~----~~eAv-----~~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM------S----VAEAV-----KKADVVML 66 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC------E----HHHHH-----HC-SEEEE
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec------c----HHHHH-----hhCCEEEE
Confidence 5789999999 99999999999999999999988776 6788888886432 1 22222 25799998
Q ss_pred CCCcc----ch-HHHHhccccCCEEEEE
Q 019049 228 PVGGK----LT-KESLKLLNWGAQILVI 250 (347)
Q Consensus 228 ~~g~~----~~-~~~~~~l~~~G~~v~~ 250 (347)
.+.++ .+ +.....|+++-.+++.
T Consensus 67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 67 LLPDEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 88874 33 4455678888777763
No 495
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.23 E-value=0.18 Score=48.68 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=65.9
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCC
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVG 230 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g 230 (347)
++++|.|. |.+|...++.++..|.++++++.++++.+.+++.|...+.. +.. .++.++..+-+.+|.++-+++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~G-D~~-----~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLG-NAA-----NEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEc-CCC-----CHHHHHhcCccccCEEEEEcC
Confidence 68999999 99999999999999999999999999999999888654432 222 234555556678898887776
Q ss_pred ccch----HHHHhccccCCEEEE
Q 019049 231 GKLT----KESLKLLNWGAQILV 249 (347)
Q Consensus 231 ~~~~----~~~~~~l~~~G~~v~ 249 (347)
++.- -...+...+.-+++.
T Consensus 491 ~~~~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 491 NGYEAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred ChHHHHHHHHHHHHHCCCCeEEE
Confidence 5322 122344444555554
No 496
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.19 E-value=0.24 Score=43.35 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=34.4
Q ss_pred CEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 019049 151 QVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKF 189 (347)
Q Consensus 151 ~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~ 189 (347)
++|.|+|+ |.+|.-.++.+...|.+|++.+.++++.+.
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 48999999 999999998888889999999999997765
No 497
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.19 E-value=0.13 Score=50.18 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=68.2
Q ss_pred CCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCC
Q 019049 150 GQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPV 229 (347)
Q Consensus 150 ~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~ 229 (347)
.++|+|.|. |.+|...++.++..|.++++++.++++.+.+++.|... +..+.. -.++++..+-..+|.++-++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v-~~GDat-----~~~~L~~agi~~A~~vvv~~ 472 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKV-FYGDAT-----RMDLLESAGAAKAEVLINAI 472 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeE-EEEeCC-----CHHHHHhcCCCcCCEEEEEe
Confidence 358999999 99999999999999999999999999999999988653 332322 23456666667899999999
Q ss_pred CccchH----HHHhccccCCEEEE
Q 019049 230 GGKLTK----ESLKLLNWGAQILV 249 (347)
Q Consensus 230 g~~~~~----~~~~~l~~~G~~v~ 249 (347)
+++..+ ...+.+.|.-+++.
T Consensus 473 ~d~~~n~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 473 DDPQTSLQLVELVKEHFPHLQIIA 496 (621)
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEE
Confidence 874322 23344455545444
No 498
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.18 E-value=0.095 Score=44.21 Aligned_cols=73 Identities=23% Similarity=0.352 Sum_probs=47.4
Q ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeC
Q 019049 149 SGQVLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDP 228 (347)
Q Consensus 149 ~~~~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~ 228 (347)
.+++++|.|++|++|...+..+...|++|++++++..... .+....+.. ++.+..+++.+.. +.+|+++++
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~---D~~~~~~~~~~~~--~~id~lv~~ 74 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQL---DLSDDLEPLFDWV--PSVDILCNT 74 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEEC---ChHHHHHHHHHhh--CCCCEEEEC
Confidence 4679999999999999999988889999999988654211 010111111 1211123333332 468999998
Q ss_pred CC
Q 019049 229 VG 230 (347)
Q Consensus 229 ~g 230 (347)
+|
T Consensus 75 ag 76 (235)
T PRK06550 75 AG 76 (235)
T ss_pred CC
Confidence 87
No 499
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.091 Score=43.11 Aligned_cols=64 Identities=25% Similarity=0.414 Sum_probs=44.4
Q ss_pred EEEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 152 VLLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 152 ~VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
+++|.|+++++|..++..+... ++|+++++++. ....|..+.+. .+...+.. +++|++++++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~---~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPAS---IRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHH---HHHHHHhc--CCCCEEEECCCC
Confidence 6899999999999988777666 89999988653 12234444332 44444433 468999998873
No 500
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=95.15 E-value=0.022 Score=49.83 Aligned_cols=67 Identities=22% Similarity=0.220 Sum_probs=45.2
Q ss_pred EEEecCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHhcCCcEEEeCCCCCchhhHHHHHHHhcCCcccEEEeCCCc
Q 019049 153 LLVLGAAGGVGVAAVQIGKVCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGG 231 (347)
Q Consensus 153 VlI~g~~g~~G~~~~~la~~~g~~V~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~ 231 (347)
|||+|++|.+|..+++.+...|++|++++++..+.......+ +.+..... . .+. -.++|+|+.+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~----~---~~~--~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLA----E---SEA--LEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccc----h---hhh--cCCCCEEEECCCC
Confidence 689999999999999999889999999999876543222111 11111111 1 111 2468999999874
Done!