BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019053
(347 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 205/304 (67%), Gaps = 33/304 (10%)
Query: 32 SNSESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEE-PF 90
S++ ++FPILA+A++ I+ TAFLL+SYYVFV KCC NWH ID+L RFS+ R R+ ++ P
Sbjct: 28 SSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPL 87
Query: 91 IALSPTMWNRGLDDSVIRDIPTFQFK-REGEDMSIYG-------------CVVCLNEFQE 136
+ SP + +RGLD+SVIR IP F+FK R ++ ++ C VCL+EFQ+
Sbjct: 88 MVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQD 147
Query: 137 QDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPIDQIIAPRPSPQGSQQF 196
++ LR++PNCSH FH+DCID+WLQ+NANCPLCRT +S T +P D++ AP SP+
Sbjct: 148 EEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPE----- 202
Query: 197 SESLMGGDDDFVVIELG---GEDEVLFSHRQ----QERDNSSEVFDQPR----SQSPKTL 245
+ ++ G++++VVIELG G D H + QER NS + ++ S SPK L
Sbjct: 203 NLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKL 262
Query: 246 EQKLGNSKRKKRHHVSIMGDECIDVRQ-KDDHF-STQPIRRSFSLDSAADRQLYITVQAI 303
++ K +K H ++ MGDECID+R+ KD+ F S QPIRRS S+DS+ADRQLY+ VQ
Sbjct: 263 DRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEA 322
Query: 304 VQQN 307
+++N
Sbjct: 323 IRKN 326
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/298 (50%), Positives = 187/298 (62%), Gaps = 34/298 (11%)
Query: 32 SNSESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEEPFI 91
S+S + FPILAIA++ I+ TAFLL+SYY+FV KCC NWH ID+ RR R + P +
Sbjct: 35 SSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRR---RRRSSDQNPLM 91
Query: 92 ALSPTMWNRGLDDSVIRDIPTFQFKR-------EGEDMSIYGCVVCLNEFQEQDMLRVLP 144
SP NRGLD+S IR IP F+FK+ E + + C VCLNEFQE + LR++P
Sbjct: 92 IYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIP 151
Query: 145 NCSHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPIDQIIAPRPSPQGSQQFSES----- 199
NC H FH+DCIDIWLQ NANCPLCRTS+S + +D I AP SP+ + S +
Sbjct: 152 NCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAP-SSPRENSPHSRNRNLEP 210
Query: 200 --LMGGDDDFVVIELGGED-------EVLFSHRQQERDNSSEVF--DQPRSQSPKTLEQK 248
++GGDDDFVVIELG + + +QER S+EV + P+S SP L K
Sbjct: 211 GLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKSVSP--LPIK 268
Query: 249 LGN----SKRKKRHHVSIMGDECIDVRQKDDHFS-TQPIRRSFSLDSAADRQLYITVQ 301
GN K +K H V+ MGDECID R KD HF QPIRRS S+DS+ DRQLY+ VQ
Sbjct: 269 FGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQ 326
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 18 PIKSQEMLTNQASLSNSESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLID---- 73
P S E N SN L IAI I TAFLL +YY VSK C N +
Sbjct: 40 PPISYEQFLNDGVASNPN--LSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASE 97
Query: 74 ------LLRRFSVLRARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYG- 126
+L S R Q ++PF S T GLDD++I+ I F+ K+ I G
Sbjct: 98 SGRSDIILDVNSPERGDQ-DDPFALESSTA---GLDDTLIKKIGFFKLKKHQNGFKINGT 153
Query: 127 -CVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTS-ISGTTRYPIDQII 184
C +CL EF E + LR+LP C+H FH+ CID WL+S++NCPLCR I TT+ P ++
Sbjct: 154 DCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEHHVV 213
Query: 185 A 185
Sbjct: 214 V 214
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 43 IAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEEPFIALSPTMWNRG- 101
IA++ I+ +A +L+SYY +SK C+ H L E F + + + G
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTS---SSETLNLNHNGEGFFSSTQRISTNGD 115
Query: 102 -LDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
L++S+I+ I +++K + C VCL+EF+E + LR+LP C+HAFHL CID WL+
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 161 SNANCPLCRTSISGTTRYPIDQIIAPRPSPQGSQQFSESLMGGDDDFVVIELGGEDEV-- 218
S++NCPLCR ++G +P S + S++ + + G E+
Sbjct: 176 SHSNCPLCRAFVTGVN------------NPTASVGQNVSVVVANQSNSAHQTGSVSEINL 223
Query: 219 -LFSHRQQERDNSSEVFDQPRSQSPKTLEQKLGNSKRKKRHHVSIMGDECIDVRQKDDHF 277
L + Q D S V + + ++G+ R + + + R++
Sbjct: 224 NLAGYESQTGDFDSVVVIE---------DLEIGSRNSDARSELQLP-----EERRETKDE 269
Query: 278 STQPIRRSFSLDSAADRQLYITVQAIVQQNGHNGEVSTNE 317
+ PIRRS SL+S + ++ I + G +G V T++
Sbjct: 270 DSLPIRRSVSLNSGVVVSIADVLREIEDEEGESGGVGTSQ 309
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 108/232 (46%), Gaps = 43/232 (18%)
Query: 29 ASLSNSESAFPI---LAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQ 85
A S +S+ P+ L IAI+ ++ +AFLL+SYY F+SK C S LR R
Sbjct: 43 AGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGT---------VSSLRGRV 93
Query: 86 IEEPFI------------------ALSPTMWN----RGLDDSVIRDIPTFQFKREGEDMS 123
+ S WN GLD+++I I +++R +
Sbjct: 94 FGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVH 153
Query: 124 IYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPIDQI 183
C VCL EF + + LR+LP CSHAFH CID WL+S++NCPLCR +I+ T +
Sbjct: 154 TTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT------V 207
Query: 184 IAPRPSPQGSQQFSESLMGGDDDFVVIELGGEDEVLFSHRQQERDNSSEVFD 235
P P+G + GGD+ V+ + E L +Q+ +S D
Sbjct: 208 GLASPEPEGC---APGETGGDNTHEVVVVMDGLENLCEEQQEAVSRASTADD 256
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 29/239 (12%)
Query: 41 LAIAILSIMGTAFLLLSYYVFVSKCC------NNWHLIDLLRRFSVLRARQIEEPFIALS 94
L IA++ I+ +AF+L+SYY +SK C ++ + R S Q
Sbjct: 59 LLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNG 118
Query: 95 PTMWNRG--------LDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNC 146
T N+ LD+S+I+ I +++++ + C VCL+EFQE + LR+LP C
Sbjct: 119 ATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKC 178
Query: 147 SHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPIDQIIAPRPSPQGSQQF---SESLMGG 203
+HAFH+ CID WL+S++NCPLCR I ++ I + +QQ + S+ G
Sbjct: 179 NHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLT--------NQQIVTENNSISTG 230
Query: 204 DDDFVVIELGGEDEVLFSHRQQERDNSSEVFDQPRSQSPKTLEQKLGNSKRKKRHHVSI 262
DD VV+ L E+ S + E N P Q + E++ S VSI
Sbjct: 231 DDSVVVVNLDLEN----SRSRNETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSI 285
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 88 EPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCS 147
+P A + + +RGLD +VI+ +P F F E I C VCL+EF+E + RVLPNC
Sbjct: 81 DPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIE-CAVCLSEFEESETGRVLPNCQ 139
Query: 148 HAFHLDCIDIWLQSNANCPLCRTSI 172
H FH+DCID+W S++ CPLCR+ +
Sbjct: 140 HTFHVDCIDMWFHSHSTCPLCRSLV 164
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 84 RQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVL 143
RQ+++ F + + GLD ++I +P F +K + C VCL EF E D LR+L
Sbjct: 106 RQLQQLF-----HLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLL 160
Query: 144 PNCSHAFHLDCIDIWLQSNANCPLCRTSI 172
PNCSHAFH+DCID WL SN+ CPLCR ++
Sbjct: 161 PNCSHAFHIDCIDTWLLSNSTCPLCRGTL 189
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 32 SNSESAFPILAI--AILSIMGTAFLLLSYYVF--VSKCCNNWHLIDLLRRFSVLRAR--- 84
S+S A I+ I A+L+I+ T F L++ + V++ + D +V+
Sbjct: 77 SSSLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQD 136
Query: 85 --QIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRV 142
Q++ P + T GL S+I I +KR + C VCLNEF+E + LR+
Sbjct: 137 REQVDHPIWLIRTT----GLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRL 192
Query: 143 LPNCSHAFHLDCIDIWLQSNANCPLCRTSIS 173
LP C+HAFH+ CID WL S+ NCPLCR I+
Sbjct: 193 LPKCNHAFHISCIDTWLSSHTNCPLCRAGIA 223
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 15/106 (14%)
Query: 101 GLDDSVIRDIPTFQFKREG----------EDMSIYGCVVCLNEFQEQDMLRVLPNCSHAF 150
GLDDSVI+ +P F + + C VCL EF+E D +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 151 HLDCIDIWLQSNANCPLCRTSISG-----TTRYPIDQIIAPRPSPQ 191
HL+CID WL+S+ NCPLCRT+I G T P ++APR P
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRPS 225
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 40 ILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEE--PFIALSP-T 96
I+ A+ S+ G ++ + +++ RF + R R+ P I P
Sbjct: 31 IMLAAVASLSGVILIVFALHLYA--------------RFVLRRRREAFRGLPVIFRHPFE 76
Query: 97 MWNRGLDDSVIRDIPTFQF-KREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCI 155
M RGL+ +VI +PTF +G S C VCL+ +EQD R LPNC H FH+DC+
Sbjct: 77 MPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCV 136
Query: 156 DIWLQSNANCPLCRTSISGTTRYPIDQIIAPRPSPQGS 193
D WL + + CP+CRT + R + PR P G+
Sbjct: 137 DTWLTTCSTCPVCRTEVEPRPRLEPE----PREGPVGT 170
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 97 MWNRGLDDSVIRDIPTFQFKR-EGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCI 155
+ + G+D S+I +P F +K G +S + C VCL EF+ +D LR+LP CSHAFH++CI
Sbjct: 95 LHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECI 154
Query: 156 DIWLQSNANCPLCRTSI 172
D WL S++ CPLCR+++
Sbjct: 155 DTWLLSHSTCPLCRSNL 171
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 97 MWNRGLDDSVIRDIPTFQFKREGEDMS-IYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCI 155
+ + GLD + I +P F + + + C VCLNEF + D LR+LP CSHAFHL CI
Sbjct: 176 LHDSGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCI 235
Query: 156 DIWLQSNANCPLCRTSIS 173
D WL SN+ CPLCR S+S
Sbjct: 236 DTWLLSNSTCPLCRRSLS 253
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 77 RFSVLRARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQE 136
R S + R++ + P + RGLD +R +P +++ + + + CV+CL++F+E
Sbjct: 91 RSSRMSPRRLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRN-EDCVICLSDFEE 149
Query: 137 QDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTS 171
+ ++V+P+C H FH+DC+D WL S CPLCR++
Sbjct: 150 GETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSN 184
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 99 NRGLDDSVIRDIPTFQFKR----------EGEDMSIYGCVVCLNEFQEQDMLRVLPNCSH 148
+ GLD + I +P F +K G + C VCL EF E+D LR+LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSH 164
Query: 149 AFHLDCIDIWLQSNANCPLCRTSI 172
AFHL+CID WLQSN+ CPLCR ++
Sbjct: 165 AFHLNCIDTWLQSNSTCPLCRGTL 188
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 16/150 (10%)
Query: 29 ASLSNSESAF-PILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIE 87
+ +S S F P +AI ++ ++ F L + V++ +C L R + +
Sbjct: 50 SDVSGDSSRFDPTMAILMIVLVSVFFFLGFFSVYIRRC--------LERVMGMDYGNPND 101
Query: 88 EPFIALSPTMWNRGLDDSVIRDIPTFQFK-----REGEDMSIYGCVVCLNEFQEQDMLRV 142
+ RGLD S+I PTFQ+ R G++ C VCLNEF++ + LR+
Sbjct: 102 AGNWLATNRQQARGLDASIIETFPTFQYSTVKTLRIGKEA--LECSVCLNEFEDDETLRL 159
Query: 143 LPNCSHAFHLDCIDIWLQSNANCPLCRTSI 172
+P C H FH CID WL+S+ CPLCR +
Sbjct: 160 IPKCCHVFHPGCIDAWLRSHTTCPLCRADL 189
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 34 SESAFPILAIAILSIMGTAFLLLSYYVFVSKCC--NNWHLIDLLRRFSVLRARQIEEPFI 91
+ S P +A+ I + L ++V C N ++ +RF++ R
Sbjct: 51 TSSLMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGG 110
Query: 92 ALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFH 151
+ N G+D SVI +P F+F C VCL F+ ++LR+LP C HAFH
Sbjct: 111 GVVGGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFH 170
Query: 152 LDCIDIWLQSNANCPLCRTSI 172
++C+D WL +++ CPLCR +
Sbjct: 171 VECVDTWLDAHSTCPLCRYRV 191
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 48/79 (60%)
Query: 101 GLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
GL S I I FK+ + C VCLNEF+E + LR+LP CSHAFHL+CID WL
Sbjct: 109 GLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLL 168
Query: 161 SNANCPLCRTSISGTTRYP 179
S+ NCPLCR + T P
Sbjct: 169 SHKNCPLCRAPVLLITEPP 187
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 97 MWNRGLDDSVIRDIPTFQFKRE-GEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCI 155
+ + G+D S I +P F +K G + C VCL EF+ +D LR+LP CSHAFH+DCI
Sbjct: 103 LHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCI 162
Query: 156 DIWLQSNANCPLCR 169
D WL S++ CPLCR
Sbjct: 163 DTWLLSHSTCPLCR 176
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 99 NRGLDDSVIRDIPTFQFKR-EGEDMSIYG--CVVCLNEFQEQDMLRVLPNCSHAFHLDCI 155
+RGL VI P+F + + +G + G C +CLNEF++++ LR++P CSHAFH CI
Sbjct: 97 SRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCI 156
Query: 156 DIWLQSNANCPLCRTSI 172
D+WL S + CP+CR S+
Sbjct: 157 DVWLSSRSTCPVCRASL 173
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 39 PILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRR-FSVLRARQIEEPFIALSPTM 97
P AI ++ ++ F L V++ +C + +D + L RQ EP
Sbjct: 37 PTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTEP-------- 88
Query: 98 WNRGLDDSVIRDIPTFQFK-----REGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHL 152
GLD SVI PTF + R G++ C VCLNEF++ + LR++P C H FH
Sbjct: 89 ---GLDASVIETFPTFPYSTVKTLRIGKEA--LECPVCLNEFEDDETLRLIPQCCHVFHP 143
Query: 153 DCIDIWLQSNANCPLCRTSI 172
CID WL+S CPLCR ++
Sbjct: 144 GCIDAWLRSQTTCPLCRANL 163
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 101 GLDDSVIRDIPTFQFKREGEDM---SIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDI 157
GLD++V+ P F + E C +CLNE ++ + +R+LP C+H FH+DCID
Sbjct: 95 GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154
Query: 158 WLQSNANCPLCRTSISGTTRYPIDQ 182
WL S+A CP+CR++++ + P D+
Sbjct: 155 WLYSHATCPVCRSNLTAKSNKPGDE 179
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 15/150 (10%)
Query: 24 MLTNQASLSNSESAFPILA--IAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRF-SV 80
+L S S +E++ P + + IL+++ A + + VS+C W LRR S
Sbjct: 8 LLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRC--AW-----LRRIASR 60
Query: 81 LRARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDM-SIYGCVVCLNEFQEQDM 139
R+ Q P +A + N+GL V+R +P + + + C +CL EF D
Sbjct: 61 NRSDQTHPPPVAAA----NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDE 116
Query: 140 LRVLPNCSHAFHLDCIDIWLQSNANCPLCR 169
LRVLP C H FH+ CID WL S+++CP CR
Sbjct: 117 LRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 39 PILAI--AILSIM-GTAFLLLSYYVFVSKCCNNWHLIDLLR---RFSVLRARQIEEPFIA 92
P LA+ +L+IM F+LL Y +KCC+ IDL R + F
Sbjct: 35 PSLAVVTGVLAIMFALTFVLLVY----AKCCH----IDLRSGSGDRRRHDRRLRQGIFFN 86
Query: 93 LSPTMWNR--GLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAF 150
S +R GLD + I +P F+F C VCL++F+ ++LR+LP C HAF
Sbjct: 87 RSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAF 146
Query: 151 HLDCIDIWLQSNANCPLCRTSIS 173
H+ CID WL+ +A CPLCR +S
Sbjct: 147 HIGCIDQWLEQHATCPLCRDRVS 169
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 102 LDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQS 161
LD +V+ IP F + + + + C VCL+EF+E D RVLP C H FH+DCID W +S
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 162 NANCPLCRTSISGTTRYPIDQIIAPRP 188
++CPLCR + P + P P
Sbjct: 148 RSSCPLCRAPVQ-----PAQPVTEPEP 169
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 105 SVIRDIPTFQFK---REGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQS 161
SV+ +P F+F R M+ C VCL++F+ +D LR+LP C HAFH DCIDIWL S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 162 NANCPLCRTSI 172
N CPLCR+ +
Sbjct: 152 NQTCPLCRSPL 162
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 100 RGLDDSVIRDIPTFQFKR-EGEDMSIYG--CVVCLNEFQEQDMLRVLPNCSHAFHLDCID 156
RGL+ VI PTF + +G + G C +CL+EF++Q+ LR +P CSH FH +CID
Sbjct: 93 RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCID 152
Query: 157 IWLQSNANCPLCRTSIS 173
+WL S + CP+CR ++S
Sbjct: 153 VWLSSWSTCPVCRANLS 169
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 18/175 (10%)
Query: 13 DQALAPIKSQEMLTNQASLSNSESAFPILAIAILS----IMGTAFLLLSYYVFVSKCCNN 68
+Q L S+++L + N++ AF + +++ + G +LLS + CC
Sbjct: 15 EQFLGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVMMLLSILICGIICCLG 74
Query: 69 WHLIDLLRRFSVLRARQ--IEEPFIALSPTMW--NRGLDDSVIRDIPTFQFKREGEDMSI 124
H I R ++ R+ + I EP +LS T N+G+ +R P + E M++
Sbjct: 75 LHYII---RCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPE---MNL 128
Query: 125 YG----CVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGT 175
G CV+CL++F + LR+LP C+H FH+ CID WLQ + CP CR + T
Sbjct: 129 PGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVET 183
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 72 IDLLRRFSVLRARQIEEPFIALS----PTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGC 127
+ L R+ +LR+ A + P+ GL+ S+I+ +P F F ++ C
Sbjct: 18 LHLYYRWYLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTALFAM-EC 76
Query: 128 VVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSI---SGTTRYPIDQI 183
VCL+EF++ + RV+PNC H FH+ CID+W S+++CPLCR+ I +G + +D++
Sbjct: 77 SVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEV 135
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 26 TNQASLSNSESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFS----VL 81
T ++ NS +A + IL+ + A + + + VS+C W LRR + +
Sbjct: 14 TPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRC--VW-----LRRLAAGNRTV 66
Query: 82 RARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYG-CVVCLNEFQEQDML 140
Q + P ++ N+GL V++ +P F E + + C +CL EF D L
Sbjct: 67 SGSQTQSPQPPVAAA--NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDEL 124
Query: 141 RVLPNCSHAFHLDCIDIWLQSNANCPLCR 169
RVLP C H FH+ CID WL S+++CP CR
Sbjct: 125 RVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 13 DQALAPIKSQEMLTNQASLSNSESAFPILAIAILS----IMGTAFLLLSYYVFVSKCCNN 68
+Q+L S+++L + N++ AF + +++ + G +LLS + CC
Sbjct: 16 EQSLGGFVSRKLLLHNPFDHNTQRAFAVAPSPLITHENNLSGNVLMLLSVLICGIICCLG 75
Query: 69 WHLIDLLRRFSVLRARQIEEPFIALSPTMW--NRGLDDSVIRDIPTFQFKREGEDMSIYG 126
H I + F + I EP LS N+G++ +R P + E M++ G
Sbjct: 76 LHYI-IRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPE---MNLPG 131
Query: 127 ----CVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGTTR 177
CV+CL++F + +R+LP C H FH+ CID WLQ + CP CR + T +
Sbjct: 132 LGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQ 186
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 34 SESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEEPFIAL 93
S S P +A+ ++ ++ F + + V++ C +D + R++ +A
Sbjct: 38 SGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTG---AVDGSVTPAGGARRRVTNATVA- 93
Query: 94 SPTMWNRGLDDSVIRDIPTFQF---KREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAF 150
RGLD I PTF + K + C +CLNEF++ + LR+LP C H F
Sbjct: 94 ------RGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVF 147
Query: 151 HLDCIDIWLQSNANCPLCRTSISGTTRYP 179
H CI WLQ + CP+CRT+++ T P
Sbjct: 148 HPHCIGAWLQGHVTCPVCRTNLAEQTPEP 176
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 93 LSPTMWNRGLDDSVIRDIPTFQF-KREGEDMSI--YGCVVCLNEFQEQDMLRVLPNCSHA 149
+SP RGLD I+ P+F + + G + I CVVCLNEF++ + LR++P C H
Sbjct: 48 MSPRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHV 107
Query: 150 FHLDCIDIWLQSNANCPLCRTSI 172
FH DC+DIWL ++ CP+CR +
Sbjct: 108 FHADCVDIWLSHSSTCPICRAKV 130
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 100 RGLDDSVIRDIPTFQF---KREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCID 156
RGLD SV+ PTF + K + C +CLNEF++ + LR+LP C H FH CID
Sbjct: 98 RGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 157
Query: 157 IWLQSNANCPLCRTSIS 173
WL+++ CP+CR +++
Sbjct: 158 AWLEAHVTCPVCRANLA 174
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 6/132 (4%)
Query: 45 ILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIE-EPFIALSPTMWNRGLD 103
++ ++ FL++ + VF S C + R S+ R+ + E + + RGLD
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNA--QFSRSSIFRSTDADAESQVVRIRRLTARGLD 108
Query: 104 DSVIRDIPTFQFKREGEDMSIYG---CVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
I PTF + G C VCL EF++ + LR++P C H FH DC+D+WL
Sbjct: 109 AEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLS 168
Query: 161 SNANCPLCRTSI 172
++ CPLCR +
Sbjct: 169 EHSTCPLCRADL 180
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 100 RGLDDSVIRDIPTFQFKREGED-MSIYG--CVVCLNEFQEQDMLRVLPNCSHAFHLDCID 156
RGLD+++I PTF + E + I G C VC+ EF++ + LR++P C H FH DC+
Sbjct: 66 RGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVS 125
Query: 157 IWLQSNANCPLCRTSI 172
+WL ++ CPLCR +
Sbjct: 126 VWLSDHSTCPLCRVDL 141
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 92 ALSPTMWNRGLDDSVIRDIPTFQF--KREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHA 149
LS + ++ LD +V+ IP F + K C VCL+EF+E+D R+LP C H+
Sbjct: 71 TLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHS 130
Query: 150 FHLDCIDIWLQSNANCPLCRTSI 172
FH+DCID W +S + CPLCR +
Sbjct: 131 FHVDCIDTWFRSRSTCPLCRAPV 153
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 101 GLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
GLD I +P F+F C VCL++F++ ++LR+LP C HAFH+ CID WL+
Sbjct: 98 GLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLE 157
Query: 161 SNANCPLCRTSIS 173
+A CPLCR ++
Sbjct: 158 QHATCPLCRNRVN 170
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 100 RGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWL 159
RGLD VI +PTF + D++ C VCL+ +E+D R+LPNC H FH+ C+D WL
Sbjct: 74 RGLDSLVIASLPTFVVGIKN-DVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWL 132
Query: 160 QSNANCPLCRT 170
+ + CP+CRT
Sbjct: 133 TTQSTCPVCRT 143
>sp|Q9M313|ATL68_ARATH RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2
SV=1
Length = 212
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 31/109 (28%)
Query: 101 GLDDSVIRDIPTFQFKR--------------EGEDMSIYGCVVCLNEFQEQDMLRVLPNC 146
GLD SVI P F F + EG + + C +CL E+ E++MLR++P C
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETT---CSICLCEYMEEEMLRMMPEC 155
Query: 147 SHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPIDQIIAPRPSPQGSQQ 195
H FH+ C+D WL+ N +CP+CR S P P+PQ + Q
Sbjct: 156 KHYFHVYCLDAWLKLNGSCPVCRNS--------------PLPTPQSTPQ 190
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 102 LDDSVIRDIPTFQFKRE-GEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
+D S I +P +K G + C VCL EF +D LR+LP CSHAFH++CID WL
Sbjct: 96 IDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 161 SNANCPLCR 169
+N+ CPLCR
Sbjct: 156 TNSTCPLCR 164
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 34 SESAFPILAIAILSIMGTAFLLLSYYVFVSKCCNNWHLIDLLRRFSVLRARQIEEPFIAL 93
+ + FP +++ + ++ L + + F S + L L +++ R + +A
Sbjct: 12 ATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVAT 71
Query: 94 SPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLD 153
P N GLD +IR P F + + C +CL+EF ++D +R++ C H FH +
Sbjct: 72 PPE--NTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSN 129
Query: 154 CIDIWLQSNANCPLCR 169
CID+W + + CP+CR
Sbjct: 130 CIDLWFELHKTCPVCR 145
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 18/177 (10%)
Query: 13 DQALAPIKSQEMLTNQASLSNSESAFPILAIAILS----IMGTAFLLLSYYVFVSKCCNN 68
+Q L ++++L + NS F + +++ + G +LLS + CC
Sbjct: 15 EQFLGSFVTRKLLLHDPFDHNSLRVFAVAPSPLITHENNLKGNVLMLLSVLICGIICCLG 74
Query: 69 WHLID--LLRRFSVLRARQIEEPFIALSPTMW--NRGLDDSVIRDIPTFQFKREGEDMSI 124
H I RR S I EP +LS N+G+ +R P + RE M++
Sbjct: 75 LHYIIRCAFRRSSRF---MISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSRE---MNL 128
Query: 125 YG----CVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGTTR 177
G CV+CL++F + LR+LP C+H FH+ CID WLQ + CP CR + T +
Sbjct: 129 PGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQ 185
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 26 TNQASLSNSESAFPILAIAILSIMGTAFLLLSYY-VFVSKCCNNWHLIDLLRRFSVLRAR 84
T++ S + F + +L + TAF+LL+ + V +++C RR R+
Sbjct: 31 TSKHHRSATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQ---ARAPPRR--AFRST 85
Query: 85 QIEEPFIALSPTMWNRG-LDDSVIRDIPTFQF----KREGEDMSIYGCVVCLNEFQEQDM 139
+P + LD V+ PT + R C VCL EF + D
Sbjct: 86 ASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDE 145
Query: 140 LRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISG 174
LRVLP C H FH DCID WL + CPLCR +++
Sbjct: 146 LRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTA 180
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 16/101 (15%)
Query: 76 RRFSVLRARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFK----REGEDMSIYGCVVCL 131
RR + A+ E+P + N GLD +++ I FK ++G + C VCL
Sbjct: 77 RRRRFVFAQSQEDP-------LHNAGLDSKILQSIHVVVFKCTDFKDGLE-----CAVCL 124
Query: 132 NEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSI 172
++ + D RVLP C+H FH+DCID+W QS++ CPLCR ++
Sbjct: 125 SDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|O82353|ATL67_ARATH RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2
SV=1
Length = 214
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 8/79 (10%)
Query: 101 GLDDSVIRDIPTFQFKREGEDMSI--------YGCVVCLNEFQEQDMLRVLPNCSHAFHL 152
GLD +VI P F F ++ S C +CL E++E +MLR++P C H FHL
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 153 DCIDIWLQSNANCPLCRTS 171
C+D WL+ N +CP+CR S
Sbjct: 164 CCLDAWLKLNGSCPVCRNS 182
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 101 GLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
GLD+ I+ P + + C +CL +++ + +LR LP+C+H FHL CID WL+
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 161 SNANCPLCRTS 171
N CP+CRTS
Sbjct: 181 LNPTCPVCRTS 191
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 100 RGLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWL 159
RGL + I +P+++F E CVVC ++F+ + +LRVLP C+H FH C+D WL
Sbjct: 369 RGLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWL 427
Query: 160 QSNANCPLCRTSISGTTR 177
++N CP+CR S R
Sbjct: 428 KTNRTCPICRADASEVHR 445
>sp|Q9LUZ9|ATL63_ARATH RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2
SV=1
Length = 308
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 92 ALSPTMWNRGLDDSVIRDIPTFQFKREGEDMSIYG-CVVCLNEFQEQDMLRVLPNCSHAF 150
A + T ++GLD SVI IP F ++ E+ CV+CL ++ D R L NC H F
Sbjct: 102 AATATRDDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGF 161
Query: 151 HLDCIDIWLQSNANCPLCRTSI 172
H++CID+WL S++ CPLCR+ +
Sbjct: 162 HVECIDMWLSSHSTCPLCRSPV 183
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 101 GLDDSVIRDIPTFQFKREGEDMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQ 160
G+ V+R IP F + + + CVVCL+E + D RVLP+C H FH++CID WLQ
Sbjct: 63 GIKPYVLRSIPIVDFNTK-DFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQ 121
Query: 161 SNANCPLCRTSI 172
SN+ CP+CR +
Sbjct: 122 SNSTCPICRKRV 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,255,339
Number of Sequences: 539616
Number of extensions: 5125429
Number of successful extensions: 12511
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 11982
Number of HSP's gapped (non-prelim): 539
length of query: 347
length of database: 191,569,459
effective HSP length: 118
effective length of query: 229
effective length of database: 127,894,771
effective search space: 29287902559
effective search space used: 29287902559
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)