BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019057
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q39117|TGT2_ARATH Trihelix transcription factor GT-2 OS=Arabidopsis thaliana GN=GT-2
PE=2 SV=1
Length = 575
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 28 TTTASIDGGDDGCKAPRLPRWTRQEILVLIQGKRVAENRVRRGRAAGMGFGSGQIEPKWA 87
TT + ++ +P RW + E+ LI R+R+ A +G P W
Sbjct: 378 TTIKMGNYDNNHSVSPSSSRWPKTEVEALI--------RIRKNLEANYQ-ENGTKGPLWE 428
Query: 88 SVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKE 121
+S+ +R G NR +C+++W N+ FKK+KE
Sbjct: 429 EISAGMRRLGYNRSAKRCKEKWENINKYFKKVKE 462
>sp|Q9C882|GTL1_ARATH Trihelix transcription factor GTL1 OS=Arabidopsis thaliana GN=GTL1
PE=1 SV=2
Length = 587
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 47 RWTRQEILVLIQGKRVAENRVRRGRAAGMGFGSGQIEPKWASVSSYCKRHGVNRGPVQCR 106
RW + EIL LI + E R + G+ W +S+ KR G NR +C+
Sbjct: 435 RWPKAEILALINLRSGMEPRYQDNVPKGLL---------WEEISTSMKRMGYNRNAKRCK 485
Query: 107 KRWSNLAGDFKKIKE 121
++W N+ +KK+KE
Sbjct: 486 EKWENINKYYKKVKE 500
>sp|Q9LU92|TGT4_ARATH Trihelix transcription factor GT-4 OS=Arabidopsis thaliana GN=GT-4
PE=2 SV=1
Length = 372
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 96/262 (36%), Gaps = 51/262 (19%)
Query: 35 GGDDG--CKAP--RLPRWTRQEILVLIQGKRVAENRVRRGRAAGMGFGSGQIEPKWASVS 90
GG+D KAP R W + E LI +R +N ++ + W +S
Sbjct: 38 GGEDHEIIKAPKKRAETWAQDETRTLISLRREMDNLFNTSKSN---------KHLWEQIS 88
Query: 91 SYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESHVKDGTE---SFWVMRNDLRRERKLP 147
+ G +R P C +W N+ +FKK K+ E G S++ D+ RERK
Sbjct: 89 KKMREKGFDRSPSMCTDKWRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERK-- 146
Query: 148 GFFDREVYDILDGAATVASSASPGLGLALAPAEETTTDEAVFDSGRSAAADDGLFSDFEP 207
++V A T SSA + TD+ D+G S F
Sbjct: 147 ----KKVAFYKSPATTTPSSAKVDSFMQF-------TDKGFEDTGIS----------FTS 185
Query: 208 EETTGTPVKD-----DAPAEAAPAAAKPISATMPIPEKQYQPNLRGCHGQGTTTEKQPAP 262
E G P + D P AA PI+A P N R G G + QP
Sbjct: 186 VEANGRPTLNLETELDHDGLPLPIAADPITANGVPPW-----NWRDTPGNG--VDGQPFA 238
Query: 263 EIGSTSQDGRKRKRFTVDGDEE 284
T + G +R +DG E
Sbjct: 239 GRIITVKFGDYTRRVGIDGTAE 260
>sp|Q9FX53|TGT1_ARATH Trihelix transcription factor GT-1 OS=Arabidopsis thaliana GN=GT-1
PE=1 SV=1
Length = 406
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 25 EQRTTTASIDGGDDGCKAP--RLPRWTRQEILVLIQGKRVAENRVRRGRAAGMGFGSGQI 82
+Q+ G D KAP R W + E LI RRG G+ S
Sbjct: 62 QQQILLGESSGEDHEVKAPKKRAETWVQDETRSLIM--------FRRG-MDGLFNTSKSN 112
Query: 83 EPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESHVKDGTESFWVMRNDLRR 142
+ W +SS + G +R P C +W NL +FKK K + S++ D+ R
Sbjct: 113 KHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILR 172
Query: 143 ER 144
ER
Sbjct: 173 ER 174
>sp|Q9LZS0|PTL_ARATH Trihelix transcription factor PTL OS=Arabidopsis thaliana GN=PTL
PE=2 SV=1
Length = 591
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 47 RWTRQEILVLIQGKRVAENRVRRGRAAGMGFGSGQIEPKWASVSS-YCKRHGVNRGPVQC 105
RW RQE L L++ + +++ + G P W VS + HG R +C
Sbjct: 119 RWPRQETLTLLEIRSRLDHKFKEANQKG---------PLWDEVSRIMSEEHGYQRSGKKC 169
Query: 106 RKRWSNLAGDFKKIKEWESHVKDG 129
R+++ NL ++K KE ++ +DG
Sbjct: 170 REKFENLYKYYRKTKEGKAGRQDG 193
>sp|Q09499|IRE1_CAEEL Serine/threonine-protein kinase/endoribonuclease ire-1
OS=Caenorhabditis elegans GN=ire-1 PE=2 SV=2
Length = 967
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 112 LAGDFKKIKEWESH-VKDGTESFWVMRNDLRRERKLPGFFDREVYDILDGAATVASSASP 170
L D +K + ++S V+D + MRN R+LP + + DI D +S P
Sbjct: 828 LKEDLRKFRTYKSFSVRDLLRA---MRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFP 884
Query: 171 GLGLALAPAEETTTDEAVFDSGRSAAADDGLFSDFEPEETTGTPVKDDAPAEAAPAAAKP 230
L L + A E + EAVF S ++ E EE +K++ E A KP
Sbjct: 885 RLLLHVYKATEYCSGEAVFKRYYSDDVRARMYPIVEEEERVRKKIKEEMANEVWARAPKP 944
Query: 231 ISATMPI 237
+ P+
Sbjct: 945 VEQRTPL 951
>sp|Q8H181|GTL2_ARATH Trihelix transcription factor GTL2 OS=Arabidopsis thaliana
GN=At5g28300 PE=2 SV=1
Length = 619
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 47 RWTRQEILVLIQGKRVAENRVRRGRAAGMGFG-SGQIEPKWASVSSYCKRHGVNRGPVQC 105
RW + E+L LI +R N S + P W +S G R +C
Sbjct: 459 RWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLWERISKKMLEIGYKRSAKRC 518
Query: 106 RKRWSNLAGDFKKIKE 121
+++W N+ F+K K+
Sbjct: 519 KEKWENINKYFRKTKD 534
>sp|Q6P1R3|MSD2_HUMAN Myb/SANT-like DNA-binding domain-containing protein 2 OS=Homo
sapiens GN=MSANTD2 PE=1 SV=1
Length = 559
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 48 WTRQEILVLIQ---GKRVAENRVRRGRAAGMGFGSGQIEP-KWASVSSYCKRHGVNRGPV 103
WT E LI +R+ E R ++ AG FGS P + VS G R P
Sbjct: 104 WTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPS 163
Query: 104 QCRKRWSNLAGDFKKIKE 121
QCR+R L + ++KE
Sbjct: 164 QCRERIKTLRRCYSRVKE 181
>sp|Q5ZHX5|MSD2_CHICK Myb/SANT-like DNA-binding domain-containing protein 2 OS=Gallus
gallus GN=MSANTD2 PE=2 SV=1
Length = 556
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 48 WTRQEILVLIQ---GKRVAENRVRRGRAAGMGFGSGQIEP-KWASVSSYCKRHGVNRGPV 103
WT E LI +R+ E R ++ AG FGS P + VS G R P
Sbjct: 100 WTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPS 159
Query: 104 QCRKRWSNLAGDFKKIKE 121
QCR+R L + ++KE
Sbjct: 160 QCRERIKTLRRCYSRVKE 177
>sp|Q6NZR2|MSD2_MOUSE Myb/SANT-like DNA-binding domain-containing protein 2 OS=Mus
musculus GN=Msantd2 PE=1 SV=1
Length = 559
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 48 WTRQEILVLIQ---GKRVAENRVRRGRAAGMGFGSGQIEP-KWASVSSYCKRHGVNRGPV 103
WT E LI +R+ E R ++ AG FGS P + VS G R P
Sbjct: 104 WTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAPGPAMYERVSRALAELGYERTPS 163
Query: 104 QCRKRWSNLAGDFKKIKE 121
QCR+R L + ++KE
Sbjct: 164 QCRERIKTLRRCYSRVKE 181
>sp|P09983|HLYAC_ECOLX Hemolysin, chromosomal OS=Escherichia coli GN=hlyA PE=1 SV=1
Length = 1023
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 82 IEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESHVKDGTESFWVMRNDLR 141
+E + +S Y K + V R + ++ W L G+ + G +S+ + +
Sbjct: 452 LEDNFKILSQYNKEYSVERSVLITQQHWDTLIGELAGVTRNGDKTLSG-KSYIDYYEEGK 510
Query: 142 RERKLPGFFDREVYDILDGAATVASSASPGL 172
R K P F ++V+D L G ++ S S L
Sbjct: 511 RLEKKPDEFQKQVFDPLKGNIDLSDSKSSTL 541
>sp|Q8KAP3|PLSX_CHLTE Phosphate acyltransferase OS=Chlorobium tepidum (strain ATCC 49652
/ DSM 12025 / TLS) GN=plsX PE=3 SV=1
Length = 331
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 40/113 (35%), Gaps = 17/113 (15%)
Query: 119 IKEWESHVKDGTESFWVMRNDLRRERKLPGFFDREVYDILDGAATVA------------- 165
I E E D + W M E+K+ + E +DIL G AT+
Sbjct: 175 IGEEEGKGPDYLKQAWKMLQKAHEEQKINFIGNIEGHDILAGKATIVVCDGLVGNTILKF 234
Query: 166 -SSASPGLGLALAPAEETTTDEAVFDSGRSAAADD---GLFSDFEPEETTGTP 214
S LG PA E E D + A G+F F+ E+ G P
Sbjct: 235 GESIPHFLGAIFKPALEKLVKEGKLDQNSAVLAGQTFKGIFEPFDVEKFGGVP 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,840,003
Number of Sequences: 539616
Number of extensions: 6287434
Number of successful extensions: 15464
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 15378
Number of HSP's gapped (non-prelim): 163
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)