Query 019059
Match_columns 346
No_of_seqs 508 out of 2096
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 10:15:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019059.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019059hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 4.4E-45 1.5E-49 307.2 34.1 286 12-345 28-320 (321)
2 1vyh_C Platelet-activating fac 100.0 2.7E-45 9.3E-50 318.9 32.4 283 13-345 105-410 (410)
3 4gqb_B Methylosome protein 50; 100.0 9.6E-45 3.3E-49 307.4 32.8 292 17-345 31-330 (344)
4 4g56_B MGC81050 protein; prote 100.0 1.3E-44 4.6E-49 308.8 29.4 293 15-345 41-342 (357)
5 1got_B GT-beta; complex (GTP-b 100.0 3.3E-43 1.1E-47 298.5 35.8 286 11-343 50-340 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 1.4E-43 4.6E-48 296.2 32.8 248 58-345 6-258 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.3E-43 1.8E-47 297.7 35.6 307 8-345 7-334 (345)
8 2ynn_A Coatomer subunit beta'; 100.0 7.7E-43 2.6E-47 291.6 34.5 286 12-345 9-301 (304)
9 3iz6_a 40S ribosomal protein R 100.0 2.7E-43 9.1E-48 303.5 30.8 301 9-346 59-375 (380)
10 3ow8_A WD repeat-containing pr 100.0 9.9E-43 3.4E-47 292.9 31.0 262 44-345 11-278 (321)
11 2pbi_B Guanine nucleotide-bind 100.0 1.3E-41 4.4E-46 290.1 36.3 289 11-343 59-354 (354)
12 1vyh_C Platelet-activating fac 100.0 2.1E-42 7.2E-47 300.7 30.3 244 59-345 102-368 (410)
13 4ery_A WD repeat-containing pr 100.0 2E-41 7E-46 284.2 34.6 290 7-345 14-311 (312)
14 2xyi_A Probable histone-bindin 100.0 1E-41 3.6E-46 298.4 33.9 326 11-345 43-409 (430)
15 2hes_X YDR267CP; beta-propelle 100.0 1.6E-41 5.3E-46 286.9 33.7 301 7-346 5-328 (330)
16 2xzm_R RACK1; ribosome, transl 100.0 8.6E-41 2.9E-45 284.0 38.5 301 11-345 16-339 (343)
17 1erj_A Transcriptional repress 100.0 2.3E-41 7.8E-46 292.8 32.8 280 16-345 64-388 (393)
18 4gqb_B Methylosome protein 50; 100.0 4.9E-42 1.7E-46 290.8 27.2 254 63-345 28-288 (344)
19 3frx_A Guanine nucleotide-bind 100.0 1.7E-40 5.7E-45 279.3 35.9 288 8-345 9-316 (319)
20 1nr0_A Actin interacting prote 100.0 9.7E-41 3.3E-45 304.6 35.2 291 12-345 143-566 (611)
21 2pm7_B Protein transport prote 100.0 3.1E-40 1E-44 274.9 33.2 255 60-345 4-284 (297)
22 1got_B GT-beta; complex (GTP-b 100.0 1.8E-40 6.2E-45 281.6 32.4 248 58-345 48-300 (340)
23 2pm9_A Protein WEB1, protein t 100.0 3.8E-41 1.3E-45 293.6 28.9 300 16-345 12-336 (416)
24 4g56_B MGC81050 protein; prote 100.0 2.9E-41 9.8E-46 288.2 27.2 268 42-345 26-300 (357)
25 3i2n_A WD repeat-containing pr 100.0 8.7E-40 3E-44 279.1 34.3 315 14-346 16-353 (357)
26 1nr0_A Actin interacting prote 100.0 7.4E-40 2.5E-44 298.8 35.0 288 14-345 57-396 (611)
27 2j04_B YDR362CP, TAU91; beta p 100.0 4.2E-40 1.4E-44 292.5 31.3 329 4-346 124-517 (524)
28 2ymu_A WD-40 repeat protein; u 100.0 2.9E-39 9.9E-44 293.4 35.8 272 16-343 303-577 (577)
29 3iz6_a 40S ribosomal protein R 100.0 3.2E-40 1.1E-44 284.3 27.7 256 55-345 56-328 (380)
30 2pbi_B Guanine nucleotide-bind 100.0 2.4E-39 8.3E-44 276.0 31.5 250 58-345 57-314 (354)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-39 1.9E-43 273.0 32.7 267 57-345 7-282 (345)
32 3bg1_A Protein SEC13 homolog; 100.0 1.3E-39 4.3E-44 273.5 27.3 255 59-345 7-292 (316)
33 3dm0_A Maltose-binding peripla 100.0 1.1E-38 3.8E-43 295.5 36.1 288 12-345 378-692 (694)
34 3zwl_B Eukaryotic translation 100.0 6.4E-38 2.2E-42 268.5 37.1 295 4-345 20-345 (369)
35 1gxr_A ESG1, transducin-like e 100.0 3.5E-38 1.2E-42 266.9 34.5 282 16-344 51-335 (337)
36 3frx_A Guanine nucleotide-bind 100.0 1.5E-38 5.3E-43 267.3 31.7 251 56-345 8-266 (319)
37 2hes_X YDR267CP; beta-propelle 100.0 1.3E-38 4.6E-43 268.9 31.2 258 58-345 7-279 (330)
38 1sq9_A Antiviral protein SKI8; 100.0 1.4E-38 4.7E-43 275.8 31.2 293 12-346 12-395 (397)
39 4ery_A WD repeat-containing pr 100.0 2.1E-38 7.2E-43 265.8 31.1 246 57-345 15-267 (312)
40 2ymu_A WD-40 repeat protein; u 100.0 5.5E-38 1.9E-42 285.1 36.0 275 15-345 261-538 (577)
41 1r5m_A SIR4-interacting protei 100.0 2.1E-38 7.2E-43 276.7 31.6 305 17-346 46-425 (425)
42 4aow_A Guanine nucleotide-bind 100.0 3.5E-37 1.2E-41 261.3 37.6 297 10-345 32-336 (340)
43 1erj_A Transcriptional repress 100.0 2.4E-38 8.2E-43 273.8 30.8 255 60-345 59-340 (393)
44 3k26_A Polycomb protein EED; W 100.0 2.4E-38 8E-43 271.0 30.2 288 15-346 17-366 (366)
45 4h5i_A Guanine nucleotide-exch 100.0 4.4E-39 1.5E-43 275.4 25.4 291 19-345 17-342 (365)
46 1k8k_C P40, ARP2/3 complex 41 100.0 6.6E-38 2.2E-42 269.0 32.5 307 15-345 7-360 (372)
47 2pm9_A Protein WEB1, protein t 100.0 8.4E-39 2.9E-43 278.7 24.9 317 17-345 68-413 (416)
48 3ei3_B DNA damage-binding prot 100.0 1.9E-37 6.6E-42 267.4 32.6 285 10-346 67-382 (383)
49 2xzm_R RACK1; ribosome, transl 100.0 3.5E-37 1.2E-41 261.8 33.7 251 58-345 14-284 (343)
50 4gga_A P55CDC, cell division c 100.0 1.1E-36 3.9E-41 265.7 35.1 262 40-345 123-394 (420)
51 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-37 1.4E-41 261.2 30.9 275 59-345 5-336 (351)
52 4aez_A CDC20, WD repeat-contai 100.0 1.3E-36 4.6E-41 263.7 33.9 262 39-345 110-379 (401)
53 3jrp_A Fusion protein of prote 100.0 6.2E-37 2.1E-41 263.5 30.9 255 59-345 5-286 (379)
54 1gxr_A ESG1, transducin-like e 100.0 3.3E-36 1.1E-40 254.8 34.4 283 15-345 8-295 (337)
55 3dwl_C Actin-related protein 2 100.0 4.7E-38 1.6E-42 270.6 22.7 307 16-344 11-377 (377)
56 4e54_B DNA damage-binding prot 100.0 1.3E-37 4.6E-42 272.8 25.2 269 59-345 113-429 (435)
57 3vl1_A 26S proteasome regulato 100.0 9.9E-37 3.4E-41 266.1 30.0 291 23-346 104-419 (420)
58 3vl1_A 26S proteasome regulato 100.0 2.7E-37 9.3E-42 269.7 25.9 276 21-345 61-364 (420)
59 3dwl_C Actin-related protein 2 100.0 7.9E-38 2.7E-42 269.2 22.0 242 63-344 9-279 (377)
60 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-37 4.4E-42 276.5 23.9 256 62-345 130-427 (524)
61 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-36 3.8E-41 261.4 28.8 244 62-345 5-273 (372)
62 4a11_B DNA excision repair pro 100.0 8E-36 2.7E-40 259.0 33.9 265 59-345 37-364 (408)
63 3odt_A Protein DOA1; ubiquitin 100.0 6.6E-36 2.3E-40 250.4 31.6 283 7-345 9-295 (313)
64 4aow_A Guanine nucleotide-bind 100.0 9.8E-36 3.4E-40 252.3 32.3 251 58-345 31-285 (340)
65 4ggc_A P55CDC, cell division c 100.0 3.9E-35 1.3E-39 246.3 35.4 272 24-345 33-314 (318)
66 1sq9_A Antiviral protein SKI8; 100.0 2.9E-36 9.8E-41 261.2 29.1 254 58-345 9-321 (397)
67 3gre_A Serine/threonine-protei 100.0 9.6E-37 3.3E-41 267.7 25.7 320 7-343 53-437 (437)
68 2aq5_A Coronin-1A; WD40 repeat 100.0 6.5E-37 2.2E-41 265.8 24.0 274 39-345 54-341 (402)
69 3dm0_A Maltose-binding peripla 100.0 1E-35 3.4E-40 275.7 32.7 251 58-345 375-631 (694)
70 3mkq_A Coatomer beta'-subunit; 100.0 1.4E-35 4.7E-40 279.7 33.1 287 12-345 9-301 (814)
71 1yfq_A Cell cycle arrest prote 100.0 3.7E-35 1.3E-39 249.1 32.5 273 14-338 9-315 (342)
72 3i2n_A WD repeat-containing pr 100.0 2.1E-35 7.2E-40 251.9 30.3 251 55-345 8-290 (357)
73 3zwl_B Eukaryotic translation 100.0 5.4E-35 1.9E-39 250.3 32.1 250 53-345 20-303 (369)
74 3dw8_B Serine/threonine-protei 100.0 6.7E-35 2.3E-39 256.5 31.4 313 16-343 28-443 (447)
75 3ei3_B DNA damage-binding prot 100.0 5.5E-35 1.9E-39 252.1 30.0 247 57-345 65-338 (383)
76 3mkq_A Coatomer beta'-subunit; 100.0 3E-35 1E-39 277.4 30.4 245 58-345 6-258 (814)
77 3dw8_B Serine/threonine-protei 100.0 1.3E-35 4.3E-40 261.2 26.0 257 63-345 26-372 (447)
78 3jro_A Fusion protein of prote 100.0 1.7E-35 5.8E-40 275.8 27.8 255 59-345 3-284 (753)
79 2pm7_B Protein transport prote 100.0 2E-34 6.9E-39 239.8 30.4 251 12-284 5-285 (297)
80 1p22_A F-BOX/WD-repeat protein 100.0 3.6E-34 1.2E-38 251.1 32.2 276 18-345 135-413 (435)
81 1yfq_A Cell cycle arrest prote 100.0 7.9E-35 2.7E-39 247.0 26.6 249 61-345 7-281 (342)
82 3gre_A Serine/threonine-protei 100.0 3.4E-35 1.2E-39 257.8 24.5 281 50-345 48-358 (437)
83 1r5m_A SIR4-interacting protei 100.0 1.7E-34 5.8E-39 252.0 28.8 243 59-345 39-360 (425)
84 3v7d_B Cell division control p 100.0 4.7E-34 1.6E-38 252.5 31.3 266 28-345 132-420 (464)
85 3k26_A Polycomb protein EED; W 100.0 5E-35 1.7E-39 250.4 23.8 258 59-345 12-317 (366)
86 1pgu_A Actin interacting prote 100.0 9.2E-34 3.1E-38 259.0 33.6 285 13-345 157-613 (615)
87 3mmy_A MRNA export factor; mRN 100.0 6.1E-34 2.1E-38 243.7 30.4 284 11-343 34-343 (368)
88 3sfz_A APAF-1, apoptotic pepti 100.0 3.5E-34 1.2E-38 281.5 32.8 283 15-345 614-912 (1249)
89 3odt_A Protein DOA1; ubiquitin 100.0 8.9E-34 3E-38 237.4 30.6 244 53-345 6-254 (313)
90 3bg1_A Protein SEC13 homolog; 100.0 3E-34 1E-38 240.8 26.1 250 13-284 10-293 (316)
91 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-33 6.5E-38 276.3 31.9 295 8-345 649-1033(1249)
92 2oaj_A Protein SNI1; WD40 repe 100.0 9.2E-34 3.2E-38 267.9 28.1 306 18-346 100-605 (902)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-33 5.7E-38 244.4 26.6 248 67-345 36-298 (402)
94 1pgu_A Actin interacting prote 100.0 2.9E-33 1E-37 255.7 29.5 282 13-343 60-363 (615)
95 3v7d_B Cell division control p 100.0 3.4E-33 1.2E-37 246.9 28.5 240 57-345 113-380 (464)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.1E-33 2.1E-37 244.3 28.8 199 118-344 100-337 (450)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.1E-32 1.4E-36 239.0 33.6 248 63-345 100-390 (450)
98 4h5i_A Guanine nucleotide-exch 100.0 7.3E-33 2.5E-37 236.8 28.0 225 39-284 101-343 (365)
99 4gq1_A NUP37; propeller, trans 100.0 4.1E-33 1.4E-37 240.9 26.8 295 10-345 10-388 (393)
100 3vu4_A KMHSV2; beta-propeller 100.0 8.9E-33 3E-37 235.5 28.4 236 60-345 14-270 (355)
101 1l0q_A Surface layer protein; 100.0 3.9E-32 1.3E-36 234.8 32.9 261 39-345 9-274 (391)
102 4e54_B DNA damage-binding prot 100.0 1.2E-33 4.3E-38 247.6 23.7 211 111-345 110-326 (435)
103 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4E-32 1.4E-36 238.8 32.2 267 17-345 160-441 (445)
104 3f3f_A Nucleoporin SEH1; struc 100.0 4.1E-32 1.4E-36 230.4 30.9 260 14-284 9-337 (351)
105 4aez_A CDC20, WD repeat-contai 100.0 1.5E-32 5E-37 238.3 28.6 236 63-345 89-335 (401)
106 4a11_B DNA excision repair pro 100.0 4.9E-32 1.7E-36 235.2 31.7 285 13-344 40-403 (408)
107 3lrv_A PRE-mRNA-splicing facto 100.0 2.7E-33 9.2E-38 237.8 22.7 235 69-345 40-291 (343)
108 3bws_A Protein LP49; two-domai 100.0 7.3E-32 2.5E-36 236.3 31.8 278 22-346 128-432 (433)
109 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-31 8.2E-36 233.9 34.0 257 27-345 128-390 (445)
110 3jrp_A Fusion protein of prote 100.0 5.5E-32 1.9E-36 232.5 28.5 252 10-284 5-287 (379)
111 2j04_A TAU60, YPL007P, hypothe 100.0 1E-32 3.5E-37 240.1 22.9 263 17-345 16-296 (588)
112 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-32 1.6E-36 256.2 29.4 242 59-344 11-310 (902)
113 3vu4_A KMHSV2; beta-propeller 100.0 7.9E-31 2.7E-35 223.5 34.2 291 13-345 16-335 (355)
114 2xyi_A Probable histone-bindin 100.0 6.1E-32 2.1E-36 236.5 27.2 260 66-345 46-352 (430)
115 2w18_A PALB2, fancn, partner a 100.0 7.2E-31 2.5E-35 215.1 31.5 266 40-345 61-356 (356)
116 3mmy_A MRNA export factor; mRN 100.0 8.6E-32 2.9E-36 230.3 27.1 251 57-345 31-303 (368)
117 3lrv_A PRE-mRNA-splicing facto 100.0 3.7E-31 1.3E-35 224.7 29.2 269 26-343 46-330 (343)
118 1p22_A F-BOX/WD-repeat protein 100.0 4.4E-31 1.5E-35 231.5 28.9 230 62-345 130-364 (435)
119 3jro_A Fusion protein of prote 100.0 4E-31 1.4E-35 246.4 28.1 251 12-285 5-286 (753)
120 4gga_A P55CDC, cell division c 100.0 3.5E-30 1.2E-34 224.7 31.7 249 11-284 142-395 (420)
121 2j04_A TAU60, YPL007P, hypothe 100.0 7E-30 2.4E-34 222.4 28.2 244 63-335 83-350 (588)
122 3bws_A Protein LP49; two-domai 100.0 7.1E-29 2.4E-33 217.3 31.5 258 45-345 102-389 (433)
123 2w18_A PALB2, fancn, partner a 100.0 1.6E-29 5.3E-34 207.3 21.8 253 7-283 77-356 (356)
124 1l0q_A Surface layer protein; 100.0 1.4E-27 4.8E-32 206.2 34.2 236 19-284 34-275 (391)
125 4gq1_A NUP37; propeller, trans 100.0 2.1E-29 7.2E-34 217.7 22.5 229 39-283 108-388 (393)
126 4ggc_A P55CDC, cell division c 100.0 1.2E-27 4.2E-32 200.5 31.2 247 13-284 64-315 (318)
127 3hfq_A Uncharacterized protein 100.0 8.4E-27 2.9E-31 198.2 33.1 290 29-345 3-316 (347)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.8E-27 6.2E-32 206.8 28.9 277 26-346 72-387 (415)
129 1ri6_A Putative isomerase YBHE 100.0 2E-26 6.9E-31 195.2 29.7 277 39-345 12-307 (343)
130 3scy_A Hypothetical bacterial 100.0 4.4E-25 1.5E-29 188.6 33.9 295 25-345 10-336 (361)
131 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-25 4.2E-30 195.3 29.2 254 28-327 143-410 (415)
132 3u4y_A Uncharacterized protein 100.0 3.1E-25 1E-29 187.2 30.0 274 25-346 6-304 (331)
133 2ojh_A Uncharacterized protein 100.0 6.6E-26 2.3E-30 187.7 24.9 253 39-336 19-292 (297)
134 1nir_A Nitrite reductase; hemo 99.9 1.3E-24 4.3E-29 194.6 32.7 284 20-345 182-513 (543)
135 1nir_A Nitrite reductase; hemo 99.9 3.2E-24 1.1E-28 192.0 30.5 284 24-345 145-457 (543)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.7E-24 5.8E-29 201.0 28.2 284 18-346 83-435 (706)
137 3u4y_A Uncharacterized protein 99.9 1.2E-23 4.1E-28 177.4 26.5 237 71-345 3-251 (331)
138 3vgz_A Uncharacterized protein 99.9 2.2E-23 7.4E-28 177.3 28.0 272 20-335 44-334 (353)
139 2ecf_A Dipeptidyl peptidase IV 99.9 4.8E-24 1.6E-28 199.1 25.9 289 16-345 36-412 (741)
140 1pby_B Quinohemoprotein amine 99.9 3.9E-24 1.3E-28 180.6 22.5 260 40-345 9-309 (337)
141 2ojh_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 171.5 26.6 222 87-345 18-257 (297)
142 2ecf_A Dipeptidyl peptidase IV 99.9 4.8E-23 1.6E-27 192.3 30.4 280 19-345 111-458 (741)
143 3vgz_A Uncharacterized protein 99.9 3.7E-23 1.2E-27 175.9 25.6 248 64-345 39-302 (353)
144 1ri6_A Putative isomerase YBHE 99.9 2.2E-22 7.6E-27 170.3 26.2 247 20-283 41-307 (343)
145 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.5E-22 1.2E-26 170.8 26.7 282 29-345 3-340 (365)
146 2z3z_A Dipeptidyl aminopeptida 99.9 8.2E-23 2.8E-27 189.7 23.5 241 66-345 82-390 (706)
147 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-22 7E-27 187.5 24.4 285 19-345 19-392 (723)
148 1xfd_A DIP, dipeptidyl aminope 99.9 1.4E-21 4.8E-26 181.9 29.3 286 19-337 63-432 (723)
149 3o4h_A Acylamino-acid-releasin 99.9 4.9E-23 1.7E-27 187.0 18.9 233 65-344 21-274 (582)
150 2oit_A Nucleoporin 214KDA; NH2 99.9 3E-23 1E-27 180.9 16.7 202 121-346 37-278 (434)
151 2oit_A Nucleoporin 214KDA; NH2 99.9 3E-22 1E-26 174.6 22.3 208 66-284 37-278 (434)
152 3o4h_A Acylamino-acid-releasin 99.9 8.6E-22 2.9E-26 178.8 25.1 273 17-345 22-314 (582)
153 1jmx_B Amine dehydrogenase; ox 99.9 8.6E-22 3E-26 167.1 22.5 234 70-345 4-324 (349)
154 1k32_A Tricorn protease; prote 99.9 9E-21 3.1E-25 183.0 31.0 293 17-345 53-460 (1045)
155 1k32_A Tricorn protease; prote 99.9 1.7E-21 5.7E-26 188.1 25.2 254 40-344 222-500 (1045)
156 3scy_A Hypothetical bacterial 99.9 1.1E-19 3.9E-24 155.0 32.4 251 20-283 53-336 (361)
157 3hfq_A Uncharacterized protein 99.9 3.4E-20 1.2E-24 157.3 27.2 248 22-284 45-317 (347)
158 1z68_A Fibroblast activation p 99.9 1.7E-21 5.9E-26 181.2 17.4 234 69-345 19-345 (719)
159 1pby_B Quinohemoprotein amine 99.9 2.1E-20 7.3E-25 157.6 20.4 221 88-345 8-268 (337)
160 1jmx_B Amine dehydrogenase; ox 99.9 2.1E-19 7.2E-24 152.3 25.3 230 24-284 7-325 (349)
161 1z68_A Fibroblast activation p 99.9 3.3E-20 1.1E-24 172.6 21.1 278 21-345 20-390 (719)
162 3fvz_A Peptidyl-glycine alpha- 99.8 2.7E-18 9.2E-23 144.5 27.3 243 65-345 23-321 (329)
163 3pe7_A Oligogalacturonate lyas 99.8 4.4E-19 1.5E-23 152.8 22.4 278 22-344 41-380 (388)
164 1q7f_A NHL, brain tumor CG1071 99.8 3.2E-17 1.1E-21 135.1 28.0 236 63-345 27-279 (286)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.7E-18 2.3E-22 144.2 24.3 247 21-284 44-341 (365)
166 4a5s_A Dipeptidyl peptidase 4 99.8 8.1E-19 2.8E-23 163.5 19.7 235 67-345 18-352 (740)
167 3azo_A Aminopeptidase; POP fam 99.8 3.5E-18 1.2E-22 157.5 22.9 252 58-344 16-321 (662)
168 2xdw_A Prolyl endopeptidase; a 99.8 9.9E-17 3.4E-21 148.8 32.3 287 26-345 81-413 (710)
169 3c5m_A Oligogalacturonate lyas 99.8 2.8E-18 9.6E-23 148.0 19.8 277 19-344 38-380 (396)
170 3azo_A Aminopeptidase; POP fam 99.8 1.2E-17 4.2E-22 153.8 24.9 281 18-343 25-364 (662)
171 3pe7_A Oligogalacturonate lyas 99.8 5.6E-18 1.9E-22 145.9 20.6 247 59-346 24-329 (388)
172 3e5z_A Putative gluconolactona 99.8 1.8E-16 6.3E-21 131.2 25.8 233 63-339 25-280 (296)
173 4a5s_A Dipeptidyl peptidase 4 99.8 1.2E-16 4.1E-21 148.9 26.5 240 21-284 21-353 (740)
174 2dg1_A DRP35, lactonase; beta 99.8 2E-15 6.7E-20 127.2 31.3 238 59-335 38-300 (333)
175 2oiz_A Aromatic amine dehydrog 99.8 1.5E-16 5E-21 135.4 24.1 274 27-345 14-333 (361)
176 2bkl_A Prolyl endopeptidase; m 99.8 3.8E-16 1.3E-20 144.5 28.2 284 26-345 77-396 (695)
177 2gop_A Trilobed protease; beta 99.8 3.6E-16 1.2E-20 132.4 25.6 258 27-344 23-329 (347)
178 1rwi_B Serine/threonine-protei 99.8 1.4E-15 4.7E-20 124.1 26.3 237 67-345 25-263 (270)
179 3dsm_A Uncharacterized protein 99.7 2.1E-15 7.3E-20 126.6 26.5 239 66-346 44-302 (328)
180 2oiz_A Aromatic amine dehydrog 99.7 2.3E-15 7.8E-20 128.1 26.6 268 21-327 54-360 (361)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.3E-15 1.8E-19 123.4 28.1 246 65-345 17-298 (314)
182 3c5m_A Oligogalacturonate lyas 99.7 8.3E-17 2.9E-21 138.8 16.8 235 67-345 37-328 (396)
183 2dg1_A DRP35, lactonase; beta 99.7 3.5E-15 1.2E-19 125.6 23.4 242 66-345 6-262 (333)
184 2gop_A Trilobed protease; beta 99.7 4.1E-15 1.4E-19 125.9 23.3 224 66-345 15-290 (347)
185 1yr2_A Prolyl oligopeptidase; 99.7 1.9E-14 6.4E-19 134.2 29.0 249 64-345 161-440 (741)
186 2z2n_A Virginiamycin B lyase; 99.7 6.1E-13 2.1E-17 109.9 34.9 276 17-345 15-294 (299)
187 1q7f_A NHL, brain tumor CG1071 99.7 1.3E-14 4.3E-19 119.5 23.1 200 118-345 27-237 (286)
188 2z2n_A Virginiamycin B lyase; 99.7 4E-13 1.4E-17 111.0 32.0 238 63-345 12-254 (299)
189 3fvz_A Peptidyl-glycine alpha- 99.7 2E-14 6.8E-19 120.8 24.3 223 42-284 69-322 (329)
190 3g4e_A Regucalcin; six bladed 99.7 1.3E-13 4.3E-18 114.2 28.3 233 66-336 13-263 (297)
191 1qks_A Cytochrome CD1 nitrite 99.7 6.8E-13 2.3E-17 118.7 32.1 290 21-345 201-537 (567)
192 1qks_A Cytochrome CD1 nitrite 99.6 3.5E-13 1.2E-17 120.6 28.8 219 87-345 173-420 (567)
193 2xdw_A Prolyl endopeptidase; a 99.6 8.7E-14 3E-18 129.1 25.0 237 74-344 80-366 (710)
194 3e5z_A Putative gluconolactona 99.6 8E-14 2.7E-18 115.3 22.3 200 113-345 20-245 (296)
195 2ghs_A AGR_C_1268P; regucalcin 99.6 1.3E-12 4.6E-17 109.4 28.8 227 68-336 51-293 (326)
196 3no2_A Uncharacterized protein 99.6 3.9E-13 1.3E-17 109.7 24.8 204 87-333 11-230 (276)
197 2qc5_A Streptogramin B lactona 99.6 1.1E-11 3.9E-16 102.2 33.3 274 20-345 23-299 (300)
198 3hrp_A Uncharacterized protein 99.6 8.6E-13 2.9E-17 113.9 26.7 238 66-345 131-409 (409)
199 2bkl_A Prolyl endopeptidase; m 99.6 4.1E-13 1.4E-17 124.3 25.2 237 73-345 75-348 (695)
200 2qc5_A Streptogramin B lactona 99.6 1.5E-11 5.1E-16 101.6 31.7 237 64-345 18-259 (300)
201 3iuj_A Prolyl endopeptidase; h 99.6 7.1E-13 2.4E-17 122.5 24.7 246 64-345 127-404 (693)
202 1rwi_B Serine/threonine-protei 99.6 2.8E-12 9.5E-17 104.4 25.4 234 20-284 27-264 (270)
203 2mad_H Methylamine dehydrogena 99.6 1.9E-11 6.4E-16 104.1 30.7 274 26-345 30-349 (373)
204 3dr2_A Exported gluconolactona 99.5 3.4E-12 1.2E-16 106.0 24.1 235 61-339 40-300 (305)
205 3dsm_A Uncharacterized protein 99.5 1.5E-12 5.2E-17 109.2 20.8 212 89-345 15-252 (328)
206 3sjl_D Methylamine dehydrogena 99.5 6.7E-12 2.3E-16 105.8 23.9 278 23-345 39-362 (386)
207 1yr2_A Prolyl oligopeptidase; 99.5 5.2E-12 1.8E-16 117.8 24.3 241 73-344 114-391 (741)
208 3c75_H MADH, methylamine dehyd 99.5 1.1E-11 3.9E-16 106.2 22.6 275 26-345 82-401 (426)
209 1xip_A Nucleoporin NUP159; bet 99.4 8.7E-12 3E-16 105.4 19.0 179 67-270 39-230 (388)
210 3no2_A Uncharacterized protein 99.4 1.3E-10 4.5E-15 94.7 25.5 208 39-271 12-230 (276)
211 1xip_A Nucleoporin NUP159; bet 99.4 1.3E-12 4.4E-17 110.5 13.7 174 122-332 39-230 (388)
212 2qe8_A Uncharacterized protein 99.4 3.8E-11 1.3E-15 101.3 20.4 239 66-336 17-311 (343)
213 3g4e_A Regucalcin; six bladed 99.4 2E-10 6.8E-15 94.9 24.1 203 119-345 11-228 (297)
214 1mda_H Methylamine dehydrogena 99.4 4.3E-11 1.5E-15 100.9 20.0 218 92-345 47-345 (368)
215 3iuj_A Prolyl endopeptidase; h 99.4 6.1E-11 2.1E-15 109.6 21.1 198 119-345 127-358 (693)
216 2ece_A 462AA long hypothetical 99.4 1.7E-09 5.9E-14 91.9 27.5 196 75-284 93-352 (462)
217 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.9E-10 6.5E-15 95.6 21.7 204 119-345 16-255 (314)
218 2mad_H Methylamine dehydrogena 99.4 3.4E-09 1.1E-13 90.2 28.8 243 21-284 70-350 (373)
219 1fwx_A Nitrous oxide reductase 99.3 9.8E-11 3.4E-15 102.9 18.8 189 76-284 100-361 (595)
220 3hrp_A Uncharacterized protein 99.3 4.1E-09 1.4E-13 90.9 28.6 206 121-344 131-352 (409)
221 2ghs_A AGR_C_1268P; regucalcin 99.3 9.7E-10 3.3E-14 92.0 23.9 193 123-345 51-259 (326)
222 3sjl_D Methylamine dehydrogena 99.3 7.1E-10 2.4E-14 93.5 22.7 199 71-284 38-256 (386)
223 1npe_A Nidogen, entactin; glyc 99.3 1.4E-08 4.9E-13 82.3 26.9 221 66-327 36-263 (267)
224 3c75_H MADH, methylamine dehyd 99.3 1.2E-09 4.1E-14 93.7 20.7 192 75-284 82-295 (426)
225 2qe8_A Uncharacterized protein 99.3 8.9E-10 3.1E-14 92.9 19.6 208 121-344 17-276 (343)
226 1mda_H Methylamine dehydrogena 99.2 3E-09 1E-13 89.8 21.8 241 43-324 47-366 (368)
227 2iwa_A Glutamine cyclotransfer 99.2 2.6E-09 9E-14 85.3 19.6 204 109-345 8-236 (266)
228 3dr2_A Exported gluconolactona 99.2 1.8E-09 6.2E-14 89.4 19.3 199 114-345 38-266 (305)
229 2ece_A 462AA long hypothetical 99.2 1.7E-08 5.9E-13 85.8 23.7 208 130-345 93-351 (462)
230 2iwa_A Glutamine cyclotransfer 99.2 9.5E-09 3.3E-13 82.1 20.7 198 63-284 16-237 (266)
231 1npe_A Nidogen, entactin; glyc 99.1 1.1E-07 3.6E-12 77.1 26.0 196 121-345 36-237 (267)
232 3nol_A Glutamine cyclotransfer 99.1 1.6E-08 5.5E-13 79.8 18.2 190 111-334 32-244 (262)
233 1kb0_A Quinohemoprotein alcoho 99.1 2.6E-08 8.9E-13 91.5 21.4 184 125-332 247-537 (677)
234 2fp8_A Strictosidine synthase; 99.1 1.8E-07 6.2E-12 78.0 24.7 238 67-345 20-312 (322)
235 2hz6_A Endoplasmic reticulum t 99.1 7.7E-11 2.6E-15 100.4 4.2 174 135-345 11-191 (369)
236 1fwx_A Nitrous oxide reductase 99.1 1.5E-08 5E-13 89.3 18.3 202 130-345 99-360 (595)
237 3nok_A Glutaminyl cyclase; bet 99.0 3.2E-08 1.1E-12 78.1 17.9 185 62-273 49-255 (268)
238 3nol_A Glutamine cyclotransfer 99.0 3.8E-08 1.3E-12 77.7 17.8 185 62-272 37-244 (262)
239 3nok_A Glutaminyl cyclase; bet 99.0 5.2E-08 1.8E-12 76.9 18.1 189 111-334 44-254 (268)
240 2hz6_A Endoplasmic reticulum t 99.0 3.2E-10 1.1E-14 96.5 5.7 182 76-284 8-192 (369)
241 2xe4_A Oligopeptidase B; hydro 99.0 1.8E-06 6E-11 80.5 29.2 198 67-282 175-398 (751)
242 3hxj_A Pyrrolo-quinoline quino 98.9 1.2E-07 4.3E-12 79.1 19.7 215 77-345 107-323 (330)
243 3v64_C Agrin; beta propeller, 98.9 4.2E-06 1.4E-10 70.4 28.6 233 67-343 35-272 (349)
244 3mbr_X Glutamine cyclotransfer 98.9 2.6E-07 9E-12 72.3 19.1 191 110-334 9-223 (243)
245 2p4o_A Hypothetical protein; p 98.9 3.4E-06 1.1E-10 69.7 26.7 224 66-334 32-277 (306)
246 1yiq_A Quinohemoprotein alcoho 98.9 1.8E-07 6.1E-12 86.1 20.5 185 125-333 239-536 (689)
247 1kb0_A Quinohemoprotein alcoho 98.9 7.9E-08 2.7E-12 88.3 17.8 231 77-345 128-506 (677)
248 3v65_B Low-density lipoprotein 98.9 3.1E-06 1.1E-10 72.3 26.2 230 70-343 81-315 (386)
249 3mbr_X Glutamine cyclotransfer 98.9 6.4E-07 2.2E-11 70.1 19.8 185 63-273 16-224 (243)
250 3qqz_A Putative uncharacterize 98.9 2.8E-06 9.6E-11 67.4 23.4 201 116-344 22-251 (255)
251 3v64_C Agrin; beta propeller, 98.9 7.1E-06 2.4E-10 69.0 27.2 201 64-284 71-275 (349)
252 3v65_B Low-density lipoprotein 98.8 2.8E-06 9.5E-11 72.6 24.7 200 65-284 115-318 (386)
253 3tc9_A Hypothetical hydrolase; 98.8 3.4E-06 1.2E-10 73.1 25.3 257 67-346 138-430 (430)
254 3q7m_A Lipoprotein YFGL, BAMB; 98.8 4.6E-06 1.6E-10 71.0 25.3 222 77-343 143-375 (376)
255 3qqz_A Putative uncharacterize 98.8 1.4E-05 4.7E-10 63.5 25.8 205 60-282 21-251 (255)
256 1ijq_A LDL receptor, low-densi 98.8 2.1E-05 7.3E-10 65.2 28.3 221 89-344 8-236 (316)
257 2xe4_A Oligopeptidase B; hydro 98.8 1.7E-06 5.9E-11 80.6 23.5 193 122-343 175-395 (751)
258 3hxj_A Pyrrolo-quinoline quino 98.8 1.6E-07 5.3E-12 78.5 14.3 165 88-284 37-203 (330)
259 2xzh_A Clathrin heavy chain 1; 98.7 5.2E-05 1.8E-09 61.4 28.3 271 27-344 34-330 (365)
260 1ijq_A LDL receptor, low-densi 98.7 3.9E-05 1.3E-09 63.6 27.2 222 42-285 10-239 (316)
261 3sov_A LRP-6, low-density lipo 98.7 3.5E-05 1.2E-09 63.9 26.5 221 89-344 11-236 (318)
262 1yiq_A Quinohemoprotein alcoho 98.7 1.2E-06 4E-11 80.8 19.2 151 77-245 121-342 (689)
263 4hw6_A Hypothetical protein, I 98.7 2.3E-05 8E-10 67.9 26.4 254 67-346 140-433 (433)
264 3p5b_L Low density lipoprotein 98.7 3E-05 1E-09 66.5 26.7 223 42-285 92-321 (400)
265 3kya_A Putative phosphatase; s 98.7 2.3E-05 7.8E-10 68.3 25.6 257 67-346 140-475 (496)
266 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2.9E-05 9.8E-10 66.1 25.2 222 77-345 103-336 (376)
267 2p4o_A Hypothetical protein; p 98.7 1.7E-05 6E-10 65.4 22.9 206 110-345 22-241 (306)
268 4a2l_A BT_4663, two-component 98.6 9.3E-05 3.2E-09 69.6 30.2 234 65-344 214-478 (795)
269 3sov_A LRP-6, low-density lipo 98.6 5.9E-05 2E-09 62.4 25.7 222 42-285 13-239 (318)
270 3p5b_L Low density lipoprotein 98.6 4.5E-05 1.5E-09 65.4 25.7 181 89-284 90-277 (400)
271 2fp8_A Strictosidine synthase; 98.6 6.6E-06 2.2E-10 68.5 19.6 198 122-344 20-267 (322)
272 1bpo_A Protein (clathrin); cla 98.6 0.00021 7.3E-09 60.3 30.6 271 27-344 33-329 (494)
273 4a2l_A BT_4663, two-component 98.5 0.00059 2E-08 64.2 32.8 231 66-344 263-524 (795)
274 1k3i_A Galactose oxidase precu 98.5 1.1E-05 3.8E-10 74.0 20.3 229 68-335 245-530 (656)
275 2ism_A Putative oxidoreductase 98.5 0.00032 1.1E-08 59.0 26.6 240 66-337 31-337 (352)
276 3m0c_C LDL receptor, low-densi 98.5 0.00018 6.2E-09 66.9 26.3 181 89-284 402-589 (791)
277 1n7d_A LDL receptor, low-densi 98.5 1.7E-06 5.8E-11 79.7 12.9 203 65-284 405-614 (699)
278 2p9w_A MAL S 1 allergenic prot 98.5 7.8E-05 2.7E-09 61.0 20.8 158 122-284 14-215 (334)
279 1kv9_A Type II quinohemoprotei 98.4 4.2E-05 1.4E-09 70.2 21.2 155 125-284 234-488 (668)
280 3m0c_C LDL receptor, low-densi 98.4 0.00017 5.7E-09 67.2 25.1 206 64-285 422-633 (791)
281 3tc9_A Hypothetical hydrolase; 98.4 2.4E-05 8.4E-10 67.7 17.2 154 170-345 138-300 (430)
282 4a0p_A LRP6, LRP-6, low-densit 98.3 0.001 3.5E-08 60.4 27.7 223 40-285 13-238 (628)
283 3v9f_A Two-component system se 98.3 0.00088 3E-08 62.8 27.4 235 66-344 258-522 (781)
284 1n7d_A LDL receptor, low-densi 98.3 7.3E-06 2.5E-10 75.5 12.8 180 89-284 384-571 (699)
285 1k3i_A Galactose oxidase precu 98.3 5.1E-05 1.7E-09 69.7 18.4 241 70-345 190-496 (656)
286 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0018 6.2E-08 58.8 27.1 218 89-343 13-234 (628)
287 1kv9_A Type II quinohemoprotei 98.2 7.4E-05 2.5E-09 68.6 18.3 151 77-245 117-337 (668)
288 4hw6_A Hypothetical protein, I 98.2 0.00052 1.8E-08 59.4 22.0 152 122-284 140-304 (433)
289 3v9f_A Two-component system se 98.2 0.0016 5.3E-08 61.2 26.7 233 66-344 313-566 (781)
290 3s94_A LRP-6, low-density lipo 98.2 0.0012 4.1E-08 59.9 24.9 182 89-284 16-202 (619)
291 2ad6_A Methanol dehydrogenase 98.2 0.00024 8.1E-09 63.9 19.7 136 144-284 273-494 (571)
292 2ad6_A Methanol dehydrogenase 98.2 0.00023 7.9E-09 64.0 19.3 155 77-247 115-341 (571)
293 3kya_A Putative phosphatase; s 98.2 0.00077 2.7E-08 58.8 21.6 159 122-283 140-340 (496)
294 1w6s_A Methanol dehydrogenase 98.1 0.0021 7.1E-08 58.0 24.1 159 71-246 111-347 (599)
295 3a9g_A Putative uncharacterize 98.1 0.0032 1.1E-07 52.9 28.3 234 66-334 29-330 (354)
296 3sre_A PON1, serum paraoxonase 98.1 0.0013 4.4E-08 55.0 21.0 175 89-274 81-287 (355)
297 3s94_A LRP-6, low-density lipo 98.1 0.0027 9.3E-08 57.6 24.8 225 41-286 17-245 (619)
298 1xi4_A Clathrin heavy chain; a 98.1 0.0021 7.1E-08 62.5 24.5 234 24-284 30-289 (1630)
299 3amr_A 3-phytase; beta-propell 98.1 0.0009 3.1E-08 55.3 19.5 183 88-283 47-262 (355)
300 1flg_A Protein (quinoprotein e 98.1 0.00068 2.3E-08 61.1 20.7 167 143-333 291-547 (582)
301 2xbg_A YCF48-like protein; pho 98.0 0.0038 1.3E-07 51.8 28.8 233 65-343 79-319 (327)
302 1w6s_A Methanol dehydrogenase 98.0 0.003 1E-07 57.0 22.3 63 143-206 278-349 (599)
303 3amr_A 3-phytase; beta-propell 97.9 0.0024 8.3E-08 52.7 19.6 187 134-345 41-262 (355)
304 2g8s_A Glucose/sorbosone dehyd 97.9 0.0065 2.2E-07 51.0 25.8 149 66-226 18-214 (353)
305 2p9w_A MAL S 1 allergenic prot 97.8 0.0066 2.3E-07 49.7 20.0 159 68-240 15-215 (334)
306 1flg_A Protein (quinoprotein e 97.8 0.0038 1.3E-07 56.2 20.7 56 190-246 291-360 (582)
307 3sre_A PON1, serum paraoxonase 97.8 0.0042 1.5E-07 51.8 19.0 155 123-284 52-252 (355)
308 2xzh_A Clathrin heavy chain 1; 97.7 0.012 4.2E-07 47.9 25.1 237 78-346 36-290 (365)
309 2ism_A Putative oxidoreductase 97.6 0.013 4.4E-07 49.1 20.0 100 122-227 32-152 (352)
310 3pbp_A Nucleoporin NUP82; beta 97.6 0.011 3.6E-07 50.1 18.2 149 40-195 39-208 (452)
311 3a9g_A Putative uncharacterize 97.6 0.025 8.6E-07 47.4 20.9 102 121-228 29-153 (354)
312 1tl2_A L10, protein (tachylect 97.6 0.0062 2.1E-07 46.6 15.2 101 170-278 42-157 (236)
313 1bpo_A Protein (clathrin); cla 97.5 0.035 1.2E-06 47.1 25.8 236 79-346 36-289 (494)
314 3das_A Putative oxidoreductase 97.4 0.043 1.5E-06 45.6 28.2 239 65-333 31-325 (347)
315 3pbp_A Nucleoporin NUP82; beta 97.4 0.049 1.7E-06 46.2 19.9 147 128-280 28-208 (452)
316 3s25_A Hypothetical 7-bladed b 97.1 0.059 2E-06 44.0 17.5 140 126-284 58-216 (302)
317 1tl2_A L10, protein (tachylect 96.9 0.028 9.7E-07 43.0 12.7 133 180-340 4-157 (236)
318 2xbg_A YCF48-like protein; pho 96.9 0.14 4.9E-06 42.2 24.4 188 120-342 35-230 (327)
319 2vpj_A Kelch-like protein 12; 96.9 0.14 4.7E-06 41.6 20.3 140 134-284 64-231 (301)
320 2xn4_A Kelch-like protein 2; s 96.8 0.13 4.6E-06 41.7 16.9 138 134-284 63-229 (302)
321 1cru_A Protein (soluble quinop 96.8 0.18 6E-06 43.8 18.3 102 170-272 28-162 (454)
322 1cru_A Protein (soluble quinop 96.7 0.26 9E-06 42.7 29.2 111 66-187 27-162 (454)
323 3ii7_A Kelch-like protein 7; p 96.7 0.18 6.3E-06 40.9 19.9 172 90-284 23-225 (306)
324 1xi4_A Clathrin heavy chain; a 96.6 0.38 1.3E-05 47.4 20.7 236 79-346 36-289 (1630)
325 3s25_A Hypothetical 7-bladed b 96.6 0.22 7.6E-06 40.5 20.4 203 41-284 36-255 (302)
326 2g8s_A Glucose/sorbosone dehyd 96.5 0.25 8.7E-06 41.2 17.1 102 170-272 19-148 (353)
327 1zgk_A Kelch-like ECH-associat 96.0 0.48 1.6E-05 38.5 20.0 138 134-284 72-240 (308)
328 3ei3_A DNA damage-binding prot 95.9 1.4 4.8E-05 43.1 29.8 211 42-272 532-755 (1158)
329 2xn4_A Kelch-like protein 2; s 95.5 0.79 2.7E-05 37.0 19.7 138 134-284 110-276 (302)
330 2vpj_A Kelch-like protein 12; 95.4 0.87 3E-05 36.7 17.2 140 131-284 112-278 (301)
331 3sbq_A Nitrous-oxide reductase 95.3 0.37 1.3E-05 42.4 12.7 91 192-284 300-408 (638)
332 2wg3_C Hedgehog-interacting pr 95.3 1.3 4.6E-05 38.4 27.2 113 66-188 14-158 (463)
333 2be1_A Serine/threonine-protei 94.0 0.17 5.7E-06 41.9 7.4 108 136-249 13-138 (339)
334 3das_A Putative oxidoreductase 93.9 2.3 8E-05 35.2 25.1 150 115-270 26-218 (347)
335 3sbq_A Nitrous-oxide reductase 93.8 0.86 2.9E-05 40.2 11.5 70 170-240 324-408 (638)
336 4asc_A Kelch repeat and BTB do 93.7 2.3 7.9E-05 34.5 19.5 98 179-284 98-221 (315)
337 3ott_A Two-component system se 93.7 4.4 0.00015 37.7 24.9 194 67-284 374-586 (758)
338 4hvt_A Ritya.17583.B, post-pro 93.4 4.8 0.00016 37.2 22.6 202 68-284 131-381 (711)
339 2zwa_A Leucine carboxyl methyl 92.6 6.3 0.00022 36.3 18.9 147 131-284 451-635 (695)
340 1zgk_A Kelch-like ECH-associat 92.3 3.8 0.00013 33.1 20.0 140 131-284 121-287 (308)
341 2woz_A Kelch repeat and BTB do 92.2 4 0.00014 33.1 19.2 98 179-284 109-231 (318)
342 2uvk_A YJHT; unknown function, 92.0 4.2 0.00014 33.6 13.4 94 131-230 19-128 (357)
343 3ii7_A Kelch-like protein 7; p 91.8 4.3 0.00015 32.6 21.2 171 91-284 70-272 (306)
344 4asc_A Kelch repeat and BTB do 91.7 4.6 0.00016 32.7 17.7 135 136-284 8-174 (315)
345 3ott_A Two-component system se 91.5 8.9 0.0003 35.6 27.1 224 65-344 21-258 (758)
346 3ei3_A DNA damage-binding prot 91.2 12 0.00042 36.7 33.0 222 42-284 347-591 (1158)
347 2wg3_C Hedgehog-interacting pr 90.0 8.9 0.00031 33.2 14.3 108 121-229 14-158 (463)
348 2zwa_A Leucine carboxyl methyl 89.1 14 0.00046 34.1 17.8 136 92-240 469-635 (695)
349 2uvk_A YJHT; unknown function, 88.5 9.3 0.00032 31.5 17.1 47 190-238 168-224 (357)
350 2woz_A Kelch repeat and BTB do 87.7 9.8 0.00034 30.7 18.2 99 134-240 111-231 (318)
351 2be1_A Serine/threonine-protei 84.5 1.3 4.4E-05 36.6 4.9 103 181-285 11-131 (339)
352 4gq2_M Nucleoporin NUP120; bet 83.5 25 0.00084 33.8 13.8 37 170-206 237-273 (950)
353 1sqj_A OXG-RCBH, oligoxylogluc 81.3 36 0.0012 31.9 22.5 155 65-230 14-190 (789)
354 3qhy_B Beta-lactamase inhibito 78.7 23 0.00079 28.2 20.2 181 67-284 25-207 (282)
355 3q6k_A 43.2 kDa salivary prote 72.0 43 0.0015 28.1 19.9 163 92-264 124-335 (381)
356 3b7f_A Glycosyl hydrolase, BNR 67.4 54 0.0018 27.3 21.4 53 135-190 24-77 (394)
357 3qhy_B Beta-lactamase inhibito 65.9 48 0.0017 26.3 18.8 142 122-284 25-168 (282)
358 3b7f_A Glycosyl hydrolase, BNR 65.0 60 0.002 27.0 29.5 144 122-271 116-296 (394)
359 3zwu_A Alkaline phosphatase PH 54.9 43 0.0015 30.0 7.8 59 255-333 478-549 (592)
360 4a9v_A PHOX; hydrolase, beta-p 54.3 52 0.0018 29.4 8.0 59 169-227 476-549 (592)
361 3zwu_A Alkaline phosphatase PH 53.1 41 0.0014 30.2 7.4 56 170-225 477-547 (592)
362 3no0_A DNA gyrase subunit A; D 52.7 84 0.0029 24.8 20.9 159 120-284 67-246 (276)
363 4fhn_B Nucleoporin NUP120; pro 51.7 9.3 0.00032 37.5 3.3 38 170-207 239-276 (1139)
364 3q6k_A 43.2 kDa salivary prote 46.7 1.3E+02 0.0044 25.2 21.1 156 42-199 123-306 (381)
365 1sqj_A OXG-RCBH, oligoxylogluc 46.2 1.9E+02 0.0065 27.0 19.9 150 120-274 14-190 (789)
366 4fhn_B Nucleoporin NUP120; pro 45.9 14 0.00047 36.4 3.5 31 254-285 239-269 (1139)
367 3f7f_A Nucleoporin NUP120; nuc 43.7 30 0.001 31.8 5.0 36 170-207 223-258 (729)
368 4hvt_A Ritya.17583.B, post-pro 43.0 2E+02 0.007 26.5 23.1 94 188-283 318-429 (711)
369 4a9v_A PHOX; hydrolase, beta-p 40.5 2E+02 0.0069 25.7 15.1 62 122-188 477-550 (592)
370 3f7f_A Nucleoporin NUP120; nuc 40.2 33 0.0011 31.5 4.7 30 253-285 222-251 (729)
371 3no0_A DNA gyrase subunit A; D 40.2 1.4E+02 0.0046 23.6 18.7 112 170-284 69-196 (276)
372 4gq2_M Nucleoporin NUP120; bet 37.2 2.9E+02 0.0099 26.5 22.3 35 211-247 238-272 (950)
373 1q47_A Semaphorin 3A; beta pro 28.9 1.8E+02 0.0061 25.4 7.4 56 223-279 423-487 (495)
374 3uc1_A DNA gyrase subunit A; D 26.6 2.6E+02 0.0089 22.7 26.5 211 65-284 41-279 (327)
375 2cn3_A Xyloglucanase, beta-1,4 23.3 4.4E+02 0.015 24.2 26.0 112 66-187 23-151 (737)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-45 Score=307.21 Aligned_cols=286 Identities=16% Similarity=0.270 Sum_probs=243.6
Q ss_pred ccceeeEeeeccCCCC----cceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeec
Q 019059 12 LKYQARCISDVKADTD----HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST 87 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~ 87 (346)
++.+...|.++.+.++ ...++.| +.++.+.+|++.... ......+.+|...|.+++|+|++..++++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tg----s~D~~v~vW~~~~~~-~~~~~~l~gh~~~v~~~~~~~~~~~l~s~---- 98 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTG----SLDDLVKVWKWRDER-LDLQWSLEGHQLGVVSVDISHTLPIAASS---- 98 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEE----ETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECSSSSEEEEE----
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEE----cCCCCEEEEECCCCC-eeeeeeeccCCCCEEEEEECCCCCEEEEE----
Confidence 3445556666666553 4456666 468899999987643 22335678999999999999999887775
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
+.|+.|++||+. ..+.+..+..|...+.+++|+|+++. +++++.|+.|++|++++++....+. .+
T Consensus 99 s~D~~i~lWd~~---------~~~~~~~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~~-----~~ 163 (321)
T 3ow8_A 99 SLDAHIRLWDLE---------NGKQIKSIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYSLD-----TR 163 (321)
T ss_dssp ETTSEEEEEETT---------TTEEEEEEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEEEE-----CS
T ss_pred eCCCcEEEEECC---------CCCEEEEEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEEec-----CC
Confidence 699999999998 67888888899999999999999994 7777889999999998765433332 24
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcc
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP 244 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 244 (346)
...+.+++|+|+++++++++.|+.|++||+++++.+..+. +| |.+++|+|++. +|++++.|+.|++||++. ...
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~-~~~ 240 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQH-ANL 240 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTT-CCE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCC-cce
Confidence 4579999999999999999999999999999998887776 44 99999999998 899999999999999997 557
Q ss_pred eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC
Q 019059 245 IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (346)
Q Consensus 245 ~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (346)
+..+.+|...|.+++|+|++ .+|++++.|++|++||+++ ++++..+.+|...|++++|+|
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~-------------------~~~~~~~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGT-------------------RTCVHTFFDHQDQVWGVKYNG 300 (321)
T ss_dssp EEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------------------TEEEEEECCCSSCEEEEEECT
T ss_pred eEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC-------------------CEEEEEEcCCCCcEEEEEECC
Confidence 88899999999999999999 9999999999999999998 889999999999999999999
Q ss_pred CCCcEEEEeecCCeEEEeeec
Q 019059 325 REPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 325 ~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++ +|++++.|+.|++||+.
T Consensus 301 ~g~-~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 301 NGS-KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TSS-EEEEEETTCCEEEEECC
T ss_pred CCC-EEEEEeCCCeEEEEeCC
Confidence 997 89999999999999963
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-45 Score=318.93 Aligned_cols=283 Identities=16% Similarity=0.291 Sum_probs=245.5
Q ss_pred cceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcce
Q 019059 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG 92 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~ 92 (346)
..+...+..+.++++...++.|. .++.|.+|++..... ...+.+|.+.|.+++|+|+++.|+++ +.|++
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s----~Dg~i~vwd~~~~~~---~~~l~~h~~~V~~v~~~~~~~~l~sg----s~D~~ 173 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSAS----EDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASC----SADMT 173 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEE----SSSCEEEEETTTCCC---CEEECCCSSCEEEEEECTTSSEEEEE----ETTSC
T ss_pred cccCCcEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCcE---EEEEeccCCcEEEEEEcCCCCEEEEE----eCCCe
Confidence 33445677778888888887774 678999999876532 35667899999999999999888775 69999
Q ss_pred EEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeE
Q 019059 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (346)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (346)
|++||+. ..+.+..+.+|...|.+++|+|++.. +++++.|+.|++||+.++.....+ .+|...+.
T Consensus 174 i~iwd~~---------~~~~~~~~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~~~~~-----~~h~~~v~ 238 (410)
T 1vyh_C 174 IKLWDFQ---------GFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTF-----TGHREWVR 238 (410)
T ss_dssp CCEEETT---------SSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEE
T ss_pred EEEEeCC---------CCceeEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEEEEE-----eCCCccEE
Confidence 9999998 67788889999999999999999984 777789999999999876543332 34667899
Q ss_pred EEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCC--------------------CCcEEEEecC
Q 019059 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTK--------------------KKHLLVTAAD 229 (346)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~--------------------~~~~l~~~~~ 229 (346)
.+.|+|++..+++++.|+.|++||++++++...+. +| |.+++|+|+ +. ++++|+.
T Consensus 239 ~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~ 316 (410)
T 1vyh_C 239 MVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSR 316 (410)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEET
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeC
Confidence 99999999999999999999999999998877775 44 999999996 44 8999999
Q ss_pred CCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccc
Q 019059 230 ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS 309 (346)
Q Consensus 230 dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (346)
|+.|++||+++ ..++..+.+|...|++++|+|++ .+|++++.|+.|++||++. ++++..
T Consensus 317 D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~-------------------~~~~~~ 375 (410)
T 1vyh_C 317 DKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN-------------------KRCMKT 375 (410)
T ss_dssp TSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT-------------------SCCCEE
T ss_pred CCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-------------------CceEEE
Confidence 99999999997 56888899999999999999999 9999999999999999998 788889
Q ss_pred cccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 310 YSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 310 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.+|...|++++|+|+++ +|++++.|++|++|++.
T Consensus 376 ~~~h~~~v~~l~~~~~~~-~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 376 LNAHEHFVTSLDFHKTAP-YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EECCSSCEEEEEECSSSS-CEEEEETTSEEEEEC--
T ss_pred EcCCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEeCC
Confidence 999999999999999997 89999999999999863
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.6e-45 Score=307.44 Aligned_cols=292 Identities=15% Similarity=0.206 Sum_probs=223.5
Q ss_pred eEeeeccCCCCcceEEEeecccCC--CCeEEEEEecCCC-CeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKE--ENEVHLLRLSSGG-TELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~--~~~i~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i 93 (346)
+.+.++.+++++..++.+...... ++.+..++-.... ..........|...|.+++|+|++ .++++ +.|+.|
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~----s~dg~v 105 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVA----SDSGAV 105 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEE----ETTSEE
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEE----ECCCEE
Confidence 457778889999877766421110 2222222211110 111112334567889999999975 56654 689999
Q ss_pred EEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEE
Q 019059 94 AIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (346)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (346)
+|||+.... ........+.+|.+.|.+++|+|++++ +++++.|+.|++||+.+++.... ..+|...|.+
T Consensus 106 ~lWd~~~~~-----~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~~~~-----~~~h~~~V~~ 174 (344)
T 4gqb_B 106 ELWELDENE-----TLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVVLSS-----YRAHAAQVTC 174 (344)
T ss_dssp EEEEECTTS-----SCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEE-----ECCCSSCEEE
T ss_pred EEEeccCCC-----ceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEE-----EcCcCCceEE
Confidence 999998210 011122345589999999999999994 77778999999999987643222 3457789999
Q ss_pred EEeCCCCCc-EEEEecCCeEEEEEccCCCccceeec---cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee
Q 019059 174 GAWDPHDVN-AVAATCESSVQFWDLRSMGKTNSIEH---AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL 248 (346)
Q Consensus 174 ~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~---~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 248 (346)
++|+|++.. +++++.|+.|++||++++++...+.. .+ +.+++|+|++..++++|+.|+.|++||+++ .+++..+
T Consensus 175 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~ 253 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSS 253 (344)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEE
T ss_pred EEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEE
Confidence 999999865 67888999999999999988776642 22 899999997766899999999999999997 5688999
Q ss_pred cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCc
Q 019059 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (346)
Q Consensus 249 ~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (346)
.+|...|++++|+|++..+|++|+.|++|+|||+++ +++ ..+.+|.+.|++++|+|+++.
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-------------------~~~-~~~~~H~~~V~~v~~sp~~~~ 313 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-------------------SEL-FRSQAHRDFVRDATWSPLNHS 313 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-------------------CEE-EEECCCSSCEEEEEECSSSTT
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-------------------CcE-EEEcCCCCCEEEEEEeCCCCe
Confidence 999999999999999867899999999999999997 554 457899999999999999987
Q ss_pred EEEEeecCCeEEEeeec
Q 019059 329 IFASLSYDGRVRNHMLE 345 (346)
Q Consensus 329 ~l~s~~~d~~v~vw~~~ 345 (346)
+|++++.|++|++|++.
T Consensus 314 llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 314 LLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEEETTSCEEEEECC
T ss_pred EEEEEcCCCeEEEEECC
Confidence 88999999999999985
No 4
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-44 Score=308.77 Aligned_cols=293 Identities=16% Similarity=0.212 Sum_probs=227.5
Q ss_pred eeeEeeeccCCCCcceEEEeecccC--CCCeEEEEEecCCCC-eEEEeeeeccccceEEeeecCCCCceEEEEeecCCcc
Q 019059 15 QARCISDVKADTDHTSFLTGTLSLK--EENEVHLLRLSSGGT-ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY 91 (346)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~i~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~ 91 (346)
+.+.|.++.++|++..++.|..... -++.+++|+...... ........+|...|.+++|+|++..+ ++ +.|+
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~----s~dg 115 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VA----SDSG 115 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EE----ETTS
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EE----ECCC
Confidence 3467888999999999998863211 256777776654321 11223445789999999999987644 43 4789
Q ss_pred eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceee
Q 019059 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 171 (346)
.|+|||+..... .........+|...|.+++|+|+++. +++++.|+.|++||+.+++.... ..+|...|
T Consensus 116 ~v~lWd~~~~~~-----~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~~~~~-----~~~h~~~v 184 (357)
T 4g56_B 116 AVELWEILEKES-----LLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKAVLKS-----YNAHSSEV 184 (357)
T ss_dssp CEEEC-------------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTEEEEE-----ECCCSSCE
T ss_pred EEEEeeccccce-----eEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEE-----EcCCCCCE
Confidence 999999972100 01111234579999999999999984 77778899999999987543322 23577799
Q ss_pred EEEEeCCCCC-cEEEEecCCeEEEEEccCCCccceeecc-c---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCccee
Q 019059 172 SGGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIEHA-H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ 246 (346)
Q Consensus 172 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (346)
.+++|+|++. .+++++.|+.|++||++++++...+... + +.+++|+|++..+|++|+.|+.|++||+++ ..++.
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~ 263 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQ 263 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCE
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeE
Confidence 9999999886 6788889999999999998877655422 2 999999998776899999999999999997 56788
Q ss_pred eecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC-C
Q 019059 247 ELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS-R 325 (346)
Q Consensus 247 ~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 325 (346)
.+.+|...|++++|+|++..+|++++.|++|+|||+++ ++++..+ +|...|++++|+| +
T Consensus 264 ~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-------------------~~~~~~~-~H~~~V~~vafsP~d 323 (357)
T 4g56_B 264 TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-------------------SEVFRDL-SHRDFVTGVAWSPLD 323 (357)
T ss_dssp EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-------------------CEEEEEC-CCSSCEEEEEECSSS
T ss_pred EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-------------------CcEeEEC-CCCCCEEEEEEeCCC
Confidence 99999999999999999867899999999999999998 6666544 7999999999999 5
Q ss_pred CCcEEEEeecCCeEEEeeec
Q 019059 326 EPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 326 ~~~~l~s~~~d~~v~vw~~~ 345 (346)
+. +|++++.|++|++|++.
T Consensus 324 ~~-~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 324 HS-KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp TT-EEEEEETTSCEEEEECC
T ss_pred CC-EEEEEcCCCeEEEEECC
Confidence 65 99999999999999985
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-43 Score=298.46 Aligned_cols=286 Identities=14% Similarity=0.211 Sum_probs=240.6
Q ss_pred cccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCc
Q 019059 11 GLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (346)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d 90 (346)
.+..+...|..+.+++++..++.|+ .++.+.+|++.... ....+..|...|.+++|+|+++.++++ +.|
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s----~Dg~v~iWd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~----~~d 118 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSAS----QDGKLIIWDSYTTN---KVHAIPLRSSWVMTCAYAPSGNYVACG----GLD 118 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEE----TTTEEEEEETTTCC---EEEEEECSSSCEEEEEECTTSSEEEEE----ETT
T ss_pred eecCCCCceEEEEECCCCCEEEEEe----CCCcEEEEECCCCC---cceEeecCCccEEEEEECCCCCEEEEE----eCC
Confidence 3444556778888889988888774 68899999987653 234566799999999999999988875 689
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCcee
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 170 (346)
+.+++|++.... ........+.+|...|.++.|++++. +++++.|+.|++||+.+++.... ..+|...
T Consensus 119 ~~v~iw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~-----~~~h~~~ 186 (340)
T 1got_B 119 NICSIYNLKTRE-----GNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTT-----FTGHTGD 186 (340)
T ss_dssp CEEEEEETTTCS-----BSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEE-----ECCCSSC
T ss_pred CeEEEEECccCC-----CcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEE-----EcCCCCc
Confidence 999999987311 12355667889999999999999886 78888899999999987653322 2357779
Q ss_pred eEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceee
Q 019059 171 LSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247 (346)
Q Consensus 171 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 247 (346)
|.+++|+|+++.+++++.|+.|++||++++++...+. +| |.+++|+|++. .|++++.|+.|++||++. ...+..
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~~~ 263 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGN-AFATGSDDATCRLFDLRA-DQELMT 263 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc-CCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCC-CcEEEE
Confidence 9999999999999999999999999999998887776 44 99999999998 899999999999999987 445555
Q ss_pred ec--CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCC
Q 019059 248 LP--GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (346)
Q Consensus 248 ~~--~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (346)
+. .+...|.+++|+|++ .+|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+|+
T Consensus 264 ~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 264 YSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALK-------------------ADRAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp ECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEEEECTT
T ss_pred EccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEccc-------------------CcEeeEeecCCCcEEEEEEcCC
Confidence 54 233579999999999 9999999999999999998 7888889999999999999999
Q ss_pred CCcEEEEeecCCeEEEee
Q 019059 326 EPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 326 ~~~~l~s~~~d~~v~vw~ 343 (346)
+. +|++++.|+.|++||
T Consensus 324 g~-~l~s~s~D~~i~iWd 340 (340)
T 1got_B 324 GM-AVATGSWDSFLKIWN 340 (340)
T ss_dssp SS-CEEEEETTSCEEEEC
T ss_pred CC-EEEEEcCCccEEecC
Confidence 97 899999999999997
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-43 Score=296.16 Aligned_cols=248 Identities=14% Similarity=0.217 Sum_probs=214.3
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
...+.+|.+.|.+++|+|+++.|+++ +.|+.|++||++ +...+..+..|..+|.+++|+|+++. ++
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~----~~dg~v~lWd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~ 71 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT----LYSGRVELWNYE---------TQVEVRSIQVTETPVRAGKFIARKNW-II 71 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE----ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEEEGGGTE-EE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEE----cCCCcEEEEECC---------CCceeEEeeccCCcEEEEEEeCCCCE-EE
Confidence 35677899999999999999988885 689999999998 67788889999999999999999984 77
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEE
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~ 214 (346)
+++.|+.|++||+.+++....+ .+|...|.+++|+|+++++++++.|++|++||++++........+| |.++
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEE
T ss_pred EECCCCEEEEEECCCCcEEEEE-----eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEE
Confidence 7789999999999977643333 3477799999999999999999999999999999886554444455 9999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCC--CCCcEEEEecCCCeEEEEecCCCCCCCCCc
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDELPS 292 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 292 (346)
+|+|.+..+|++|+.|+.|++||++...........|...+..+.|+| ++ .+|++++.|++|++||+++
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~-------- 217 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQT-------- 217 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTT--------
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCC--------
Confidence 999954448999999999999999874433344446778899999987 55 7999999999999999998
Q ss_pred ccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 293 ESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|.+++|+|+++ +|++++.|++|++||++
T Consensus 218 -----------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 218 -----------KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSS 258 (304)
T ss_dssp -----------TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETT
T ss_pred -----------CccceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECC
Confidence 888999999999999999999997 99999999999999975
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-43 Score=297.75 Aligned_cols=307 Identities=15% Similarity=0.245 Sum_probs=237.4
Q ss_pred eeecccceee-EeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEee
Q 019059 8 IGYGLKYQAR-CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS 86 (346)
Q Consensus 8 ~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~ 86 (346)
++..+..+.. .+..+.+++++..++.|. .++.|++|++.............+|...|.+++|+|++++|+++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~----~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~--- 79 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCG----GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASA--- 79 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEE----TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEE---
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEc----CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEE---
Confidence 3444444433 566788889999998874 67899999987753222223346899999999999999988885
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG 166 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 166 (346)
+.|+.+++|++.. ...+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+.+....... ....+
T Consensus 80 -s~D~~v~iw~~~~-------~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~ 148 (345)
T 3fm0_A 80 -SFDATTCIWKKNQ-------DDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECV--SVLNS 148 (345)
T ss_dssp -ETTSCEEEEEECC-------C-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEE--EEECC
T ss_pred -ECCCcEEEEEccC-------CCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEE--EEecC
Confidence 6999999999872 234567788999999999999999984 777789999999999865432211 22345
Q ss_pred CceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcc--ceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccC
Q 019059 167 MLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT--NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (346)
|...|.+++|+|++..|++++.|+.|++||+++++.. ..+. +| |.+++|+|++. +|++++.|++|++||....
T Consensus 149 h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 149 HTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp CCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECT
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccC
Confidence 7778999999999999999999999999999877533 3443 45 99999999998 8999999999999997542
Q ss_pred Cc--------------ceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccc
Q 019059 242 KA--------------PIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL 306 (346)
Q Consensus 242 ~~--------------~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (346)
.. ++..+.+ |...|.+++|+|++ ..|++++.|+.|++|+.......... .....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~----------~~~~~ 295 (345)
T 3fm0_A 227 GNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQP----------TFSLT 295 (345)
T ss_dssp TCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSC----------CEEEE
T ss_pred CCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCccee----------eEEEE
Confidence 21 1233444 88899999999999 89999999999999998762111000 00011
Q ss_pred ccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 307 LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 307 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.....+|...|++++|+|+++.+|++++.||+|++|++.
T Consensus 296 ~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 296 AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 233468999999999999986699999999999999985
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.7e-43 Score=291.57 Aligned_cols=286 Identities=17% Similarity=0.237 Sum_probs=241.6
Q ss_pred ccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcc
Q 019059 12 LKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY 91 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~ 91 (346)
+..+...|.++.++|++..++.|. .++.+.+|++... .....+..|..+|.+++|+|+++.|+++ +.|+
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~----~dg~v~lWd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~----s~d~ 77 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTL----YSGRVELWNYETQ---VEVRSIQVTETPVRAGKFIARKNWIIVG----SDDF 77 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT---EEEEEEECCSSCEEEEEEEGGGTEEEEE----ETTS
T ss_pred ecCCCCceEEEEECCCCCEEEEEc----CCCcEEEEECCCC---ceeEEeeccCCcEEEEEEeCCCCEEEEE----CCCC
Confidence 444566788899999999998874 6789999988664 2346677899999999999999988885 6899
Q ss_pred eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceee
Q 019059 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 171 (346)
.|++||+. +.+.+..+.+|...|.+++|+|+++. +++++.|+.|++||++++.... ....+|...|
T Consensus 78 ~i~vwd~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~----~~~~~h~~~v 143 (304)
T 2ynn_A 78 RIRVFNYN---------TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALE----QTFEGHEHFV 143 (304)
T ss_dssp EEEEEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEE----EEECCCCSCE
T ss_pred EEEEEECC---------CCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchh----hhhcccCCcE
Confidence 99999998 67888899999999999999999984 7777899999999998653222 2234577799
Q ss_pred EEEEeCC-CCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCC--CCCcEEEEecCCCeEEEEEcccCCcce
Q 019059 172 SGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 172 ~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
.+++|+| ++..+++++.|+.|++||++++.....+...+ +..++|+| ++. ++++++.|+.|++||+++ ..++
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~-~~~~ 221 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT-KSCV 221 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC-EEEEEETTSEEEEEETTT-TEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCC-Cccc
Confidence 9999999 56789999999999999999888776665444 88899887 565 899999999999999997 6688
Q ss_pred eeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCC
Q 019059 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (346)
Q Consensus 246 ~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (346)
..+.+|...|.+++|+|++ .+|++++.|++|++||+++ ++++..+..|...+++++|+|+
T Consensus 222 ~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
T 2ynn_A 222 ATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST-------------------YKVEKTLNVGLERSWCIATHPT 281 (304)
T ss_dssp EEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT-------------------CCEEEEECCSSSSEEEEEECTT
T ss_pred eeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCC-------------------CceeeeccCCCccEEEEEECCC
Confidence 9999999999999999999 8999999999999999998 8888999999999999999998
Q ss_pred CCcE-EEEeecCCeEEEeeec
Q 019059 326 EPWI-FASLSYDGRVRNHMLE 345 (346)
Q Consensus 326 ~~~~-l~s~~~d~~v~vw~~~ 345 (346)
++.. +++++ |..+.+|++.
T Consensus 282 ~~~~~~asg~-~~g~~~~~~~ 301 (304)
T 2ynn_A 282 GRKNYIASGF-DNGFTVLSLG 301 (304)
T ss_dssp CGGGCEEEEE-TTEEEEEECC
T ss_pred CCceEEEEec-CCceEEEEec
Confidence 8544 66665 5557777764
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-43 Score=303.53 Aligned_cols=301 Identities=12% Similarity=0.200 Sum_probs=243.6
Q ss_pred eecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecC
Q 019059 9 GYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (346)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~ 88 (346)
...+..+...|.++.+++++..++.|+ .++.+.+|++.... ....+..|...|.+++|+|+++.+++ ++
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s----~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~~las----~~ 127 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSAS----QDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQSVAC----GG 127 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEE----TTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSSEEEE----CC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCCEEEE----ee
Confidence 344555667888899999998888874 68899999876642 33566789999999999999988877 58
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCc
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 168 (346)
.|+.+++|++...... .........+.+|.+.|.++.|+|++...+++++.|+.|++||+.+++....+......+|.
T Consensus 128 ~d~~v~iw~~~~~~~~--~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 128 LDSACSIFNLSSQADR--DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp SSSCCEEEECCCCSSC--CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred CCCcEEEEECCCCccc--cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999998732111 11233455678999999999999987666888899999999999987654444333345678
Q ss_pred eeeEEEEeCC-CCCcEEEEecCCeEEEEEccCC-Cccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc
Q 019059 169 HYLSGGAWDP-HDVNAVAATCESSVQFWDLRSM-GKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (346)
Q Consensus 169 ~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (346)
..+.+++|++ ++..+++++.|+.|++||++.. +.+..+. +| |.+++|+|++. .|++++.|++|++||+++ ..
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~-~~ 282 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-GHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRT-GH 282 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-CCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTT-TE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-CcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCC-Cc
Confidence 8999999987 7788999999999999999854 5555554 55 99999999998 899999999999999997 44
Q ss_pred ceeeecCCC-------cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc----cc
Q 019059 244 PIQELPGHT-------HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY----SD 312 (346)
Q Consensus 244 ~~~~~~~~~-------~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 312 (346)
++..+..+. ..|++++|+|++ .+|++|+.||.|++||+.. ++.+..+ .+
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~-------------------~~~~~~~~~~~~~ 342 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLL-------------------AEMVLNLGTLQNS 342 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTT-------------------CCEEEEECCSCSS
T ss_pred EEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCC-------------------CceEEEEecccCC
Confidence 566554432 348999999999 9999999999999999987 5555444 67
Q ss_pred ccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 313 YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
|.+.|++++|+|++. +|++++.|++|++|++.+
T Consensus 343 h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 343 HEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CCCCCCEEEECSSSS-EEEEECTTSCEEEEECCS
T ss_pred CCCceEEEEECCCCC-EEEEeeCCCCEEEEecCC
Confidence 999999999999997 899999999999999864
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=292.86 Aligned_cols=262 Identities=16% Similarity=0.215 Sum_probs=215.2
Q ss_pred EEEEEecCCCCeEEEeeeeccccceEEeeecCC----CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeecc
Q 019059 44 VHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF----DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (346)
Q Consensus 44 i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 119 (346)
+++.........+......+|.+.|++++|+|+ +..|++ ++.|++|+||++.. ........+.+|
T Consensus 11 ~~~~~~~~~~~g~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~t----gs~D~~v~vW~~~~-------~~~~~~~~l~gh 79 (321)
T 3ow8_A 11 ENLYFQGTNQYGILFKQEQAHDDAIWSVAWGTNKKENSETVVT----GSLDDLVKVWKWRD-------ERLDLQWSLEGH 79 (321)
T ss_dssp ----------CEEEEEETTSSSSCEEEEEEC-------CEEEE----EETTSCEEEEEEET-------TEEEEEEEECCC
T ss_pred hhHHHhhhhhhhheeeecccCCCcEEEEEEecCCCCCCCEEEE----EcCCCCEEEEECCC-------CCeeeeeeeccC
Confidence 333333333344555777899999999999985 345555 47999999999872 233445578899
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (346)
...|.+++|++++. ++++++.|+.|++||+.+++....+. .+...+.+++|+|+++.+++++.|+.|++||+++
T Consensus 80 ~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~ 153 (321)
T 3ow8_A 80 QLGVVSVDISHTLP-IAASSSLDAHIRLWDLENGKQIKSID-----AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 153 (321)
T ss_dssp SSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEE-----CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTT
T ss_pred CCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCEEEEEe-----CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCC
Confidence 99999999999998 47777889999999998765433332 2344788999999999999999999999999999
Q ss_pred CCccceeeccc--eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeE
Q 019059 200 MGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (346)
Q Consensus 200 ~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i 277 (346)
++....+.... +.+++|+|+++ +|++++.|+.|++||+++ .+++..+.+|..+|.+++|+|++ .+|++++.|+.|
T Consensus 154 ~~~~~~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i 230 (321)
T 3ow8_A 154 GKKEYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYI 230 (321)
T ss_dssp CSEEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCE
T ss_pred CceeEEecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeE
Confidence 98877766332 99999999998 899999999999999997 56788899999999999999999 999999999999
Q ss_pred EEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 278 NLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++||++. .++...+.+|...|.+++|+|+++ +|++++.|++|++||+.
T Consensus 231 ~iwd~~~-------------------~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 231 KIYDVQH-------------------ANLAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT
T ss_pred EEEECCC-------------------cceeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCC
Confidence 9999998 788888999999999999999997 89999999999999985
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=290.10 Aligned_cols=289 Identities=16% Similarity=0.182 Sum_probs=238.7
Q ss_pred cccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCc
Q 019059 11 GLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (346)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d 90 (346)
.++.+...|.++.+++++.+++.|. .++.+.+|+...... ...+..|...|.+++|+|++..++++ +.|
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s----~Dg~v~vWd~~~~~~---~~~~~~~~~~v~~~~~sp~g~~lasg----~~d 127 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSS----QDGKVIVWDSFTTNK---EHAVTMPCTWVMACAYAPSGCAIACG----GLD 127 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCCE---EEEEECSSSCCCEEEECTTSSEEEEE----STT
T ss_pred EecCCCCeEEEEEECCCCCEEEEEe----CCCeEEEEECCCCCc---ceEEecCCCCEEEEEECCCCCEEEEe----eCC
Confidence 3444566788888999998888874 689999998776532 34455688999999999999888874 799
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCcee
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 170 (346)
+.+++|++..... .........+..|...|.+++|+|++.. +++++.|+.|++||+++++....+ .+|...
T Consensus 128 ~~i~v~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~~-----~~h~~~ 198 (354)
T 2pbi_B 128 NKCSVYPLTFDKN---ENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQLLQSF-----HGHGAD 198 (354)
T ss_dssp SEEEEEECCCCTT---CCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEE-----ECCSSC
T ss_pred CCEEEEEEecccc---ccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeEEEEE-----cCCCCC
Confidence 9999999863211 1122445567789999999999999984 777788999999999876543332 346668
Q ss_pred eEEEEeCC--CCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcce
Q 019059 171 LSGGAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 171 v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
+.+++|+| ++..+++++.|+.|++||+++++++..+. .| |++++|+|++. .|++++.|++|++||++. ...+
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~-~~~~ 275 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSGD-AFASGSDDATCRLYDLRA-DREV 275 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCC-CcEE
Confidence 99999987 46789999999999999999999887776 44 99999999998 899999999999999987 4345
Q ss_pred eeecC--CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeC
Q 019059 246 QELPG--HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (346)
Q Consensus 246 ~~~~~--~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (346)
..+.. +...+.+++|+|++ .+|++++.|+.|++||+.+ ++.+..+.+|...|++++|+
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~-------------------~~~~~~l~~h~~~v~~l~~s 335 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLK-------------------GSRVSILFGHENRVSTLRVS 335 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------------------CSEEEEECCCSSCEEEEEEC
T ss_pred EEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCC-------------------CceEEEEECCCCcEEEEEEC
Confidence 55543 33578999999999 9999999999999999988 78888899999999999999
Q ss_pred CCCCcEEEEeecCCeEEEee
Q 019059 324 SREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 324 ~~~~~~l~s~~~d~~v~vw~ 343 (346)
|+++ +|++++.|++|++|+
T Consensus 336 pdg~-~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 336 PDGT-AFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTSS-CEEEEETTSEEEEEC
T ss_pred CCCC-EEEEEcCCCCEEecC
Confidence 9997 899999999999996
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-42 Score=300.75 Aligned_cols=244 Identities=20% Similarity=0.291 Sum_probs=219.0
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
..+.+|.++|++++|+|+++.++++ +.|+.|++||+. +++....+.+|...|.+++|+|+++ ++++
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~----s~Dg~i~vwd~~---------~~~~~~~l~~h~~~V~~v~~~~~~~-~l~s 167 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSA----SEDATIKVWDYE---------TGDFERTLKGHTDSVQDISFDHSGK-LLAS 167 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEE----ESSSCEEEEETT---------TCCCCEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred EeecccCCcEEEEEEcCCCCEEEEE----eCCCeEEEEECC---------CCcEEEEEeccCCcEEEEEEcCCCC-EEEE
Confidence 4567899999999999999888885 699999999998 6778888999999999999999998 4777
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEE
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVD 215 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~ 215 (346)
++.|+.|++||+.+.+.. ....+|...|.+++|+|++..+++++.|+.|++||++++.++..+. +| +.++.
T Consensus 168 gs~D~~i~iwd~~~~~~~-----~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~ 241 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECI-----RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVR 241 (410)
T ss_dssp EETTSCCCEEETTSSCEE-----ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEE
T ss_pred EeCCCeEEEEeCCCCcee-----EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEE
Confidence 789999999999865432 2234577799999999999999999999999999999999888876 55 99999
Q ss_pred eCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCC--------------------CCcEEEEecCCC
Q 019059 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE--------------------YDGFILSAGTDS 275 (346)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~--------------------~~~~l~s~~~d~ 275 (346)
|+|++. ++++++.|+.|++||+++ ......+..|...|.+++|+|+ + .+|++|+.|+
T Consensus 242 ~~~~g~-~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sgs~D~ 318 (410)
T 1vyh_C 242 PNQDGT-LIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG-PFLLSGSRDK 318 (410)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------C-CEEEEEETTS
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCC-CEEEEEeCCC
Confidence 999998 999999999999999987 5578889999999999999996 4 6899999999
Q ss_pred eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.|++||+++ +.++..+.+|...|++++|+|+++ +|++++.|+.|++||+.
T Consensus 319 ~i~iwd~~~-------------------~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 319 TIKMWDVST-------------------GMCLMTLVGHDNWVRGVLFHSGGK-FILSCADDKTLRVWDYK 368 (410)
T ss_dssp EEEEEETTT-------------------TEEEEEEECCSSCEEEEEECSSSS-CEEEEETTTEEEEECCT
T ss_pred eEEEEECCC-------------------CceEEEEECCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC
Confidence 999999998 888999999999999999999997 89999999999999975
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-41 Score=284.16 Aligned_cols=290 Identities=15% Similarity=0.258 Sum_probs=243.8
Q ss_pred eeeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEee
Q 019059 7 GIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS 86 (346)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~ 86 (346)
.+.+.+..+...+..+.+++++..++.|. .++.+.+|++.... ....+.+|...|.+++|+|+++.|+++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~--- 83 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSS----ADKLIKIWGAYDGK---FEKTISGHKLGISDVAWSSDSNLLVSA--- 83 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE---
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEee----CCCeEEEEeCCCcc---cchhhccCCCceEEEEEcCCCCEEEEE---
Confidence 34455666677888899999998888874 67899999886643 335667899999999999999888885
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG 166 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 166 (346)
+.|+.|++||++ ..+.+..+..|...|.+++|+|+++. +++++.|+.|++||+++++....+ ..
T Consensus 84 -~~d~~i~vwd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~-----~~ 147 (312)
T 4ery_A 84 -SDDKTLKIWDVS---------SGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTL-----PA 147 (312)
T ss_dssp -ETTSEEEEEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCEEEEE-----CC
T ss_pred -CCCCEEEEEECC---------CCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEEEEEe-----cC
Confidence 689999999998 67788889999999999999999984 777788999999999876533222 34
Q ss_pred CceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc
Q 019059 167 MLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (346)
|...+.+++|+|+++.+++++.|+.|++||+++++.+..+...+ +..++|+|+++ .+++++.|+.|++||+++ ..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~ 225 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDNTLKLWDYSK-GK 225 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTTEEEEEETTT-TE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCC-Cc
Confidence 56689999999999999999999999999999998877665333 99999999998 899999999999999997 55
Q ss_pred ceeeecCCCcceEE--EEeC-CCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 244 PIQELPGHTHWTWA--VCCN-PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 244 ~~~~~~~~~~~v~~--v~~~-~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
.+..+.+|.....+ ..++ +++ .+|++|+.|+.|++||+++ ++.+..+.+|...|.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~ 285 (312)
T 4ery_A 226 CLKTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQT-------------------KEIVQKLQGHTDVVIST 285 (312)
T ss_dssp EEEEECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTT-------------------CCEEEEECCCSSCEEEE
T ss_pred EEEEEEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCC-------------------chhhhhhhccCCcEEEE
Confidence 77888888765433 2344 556 8999999999999999998 78889999999999999
Q ss_pred EeCCCCCcEEEEee--cCCeEEEeeec
Q 019059 321 AWSSREPWIFASLS--YDGRVRNHMLE 345 (346)
Q Consensus 321 ~~~~~~~~~l~s~~--~d~~v~vw~~~ 345 (346)
+|+|+++ ++++++ .|+.|++|+.+
T Consensus 286 ~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 286 ACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred eecCcCC-ceEEEEccCCccEEEecCC
Confidence 9999997 888886 69999999875
No 14
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1e-41 Score=298.36 Aligned_cols=326 Identities=19% Similarity=0.323 Sum_probs=247.7
Q ss_pred cccceeeEeeeccCCC-------CcceEEEeecccCCCCeEEEEEec------------------------CCCCeEEEe
Q 019059 11 GLKYQARCISDVKADT-------DHTSFLTGTLSLKEENEVHLLRLS------------------------SGGTELICE 59 (346)
Q Consensus 11 ~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~i~~~~~~------------------------~~~~~~~~~ 59 (346)
.+++++-++.++.... ..+++++|+++....+.|+++++. ...+.+...
T Consensus 43 ~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 122 (430)
T 2xyi_A 43 ALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIE 122 (430)
T ss_dssp ECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEE
T ss_pred CCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEE
Confidence 4555554444444221 137899999988878899998765 112244556
Q ss_pred eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCC-CCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL-NSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
....|.+.|++++|+|++..++++ ++.++.|++|++....... ......++..+..|...|.+++|+|++..++++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat---~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIAT---KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEE---ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEE---ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 778899999999999985555555 4789999999997321110 011256777888999999999999999866888
Q ss_pred EecCCeEEEEEcCCCCCCceee--ecccCCCceeeEEEEeCC-CCCcEEEEecCCeEEEEEccCC---Cccceeeccc--
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQ--SKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSM---GKTNSIEHAH-- 210 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~-- 210 (346)
++.||.|++|++.++....... .....+|...|.+++|+| ++..+++++.|+.|++||++++ +....+. .|
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~ 278 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTA 278 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSS
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCC
Confidence 8889999999998744322211 112345777899999999 5666778889999999999987 3455554 44
Q ss_pred -eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCC
Q 019059 211 -VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE 289 (346)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 289 (346)
|++++|+|++++++++|+.||.|++||++....++..+..|...|.+++|+|+++.+|++++.|+.|+|||++......
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 9999999999878999999999999999986778899999999999999999996689999999999999998622111
Q ss_pred CCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 290 LPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
..... .....+++..+.+|...|++++|+|+++++|++++.|+.|++|++.
T Consensus 359 ~~~~~-----~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 359 STEDA-----EDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CHHHH-----HHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred Ccccc-----ccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 10000 0011356777888999999999999998799999999999999985
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-41 Score=286.93 Aligned_cols=301 Identities=17% Similarity=0.266 Sum_probs=221.8
Q ss_pred eeeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeee-ec-cccceEEeeecCCCCceEEEE
Q 019059 7 GIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGL-FS-HPNEIWDLSSCPFDQRIFSTV 84 (346)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~l~~~~ 84 (346)
.++..++.+...+.++.++++ .++.| +.++.+.+|++........ ..+ .+ |.+.|.+++|+|+++.|+++
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~----~~D~~i~lw~~~~~~~~~~-~~~~~~~h~~~v~~v~~sp~~~~las~- 76 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATG----STDRKIKLVSVKYDDFTLI-DVLDETAHKKAIRSVAWRPHTSLLAAG- 76 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEE----ESSSCEEEEECSSSCCEEE-EEECTTCCCSCEEEEEECTTSSEEEEE-
T ss_pred ccceeeccCCCceeeeccCCC--EEEEE----cCCCEEEEEEecCCCeEEE-EEEecCCccCCEEEEEECCCCCEEEEE-
Confidence 445566666667777777766 66665 4678999999976533332 233 34 99999999999999888775
Q ss_pred eecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc
Q 019059 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
+.|+.|++|+++.... .....+.+..+.+|...|.+++|+|++++ +++++.|+.|++||+.......... ...
T Consensus 77 ---s~D~~v~iw~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~~-~~~ 149 (330)
T 2hes_X 77 ---SFDSTVSIWAKEESAD--RTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYECI-SVL 149 (330)
T ss_dssp ---ETTSCEEEEEC---------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEEE-EEE
T ss_pred ---eCCCcEEEEEcccCcC--ccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEEE-EEe
Confidence 6899999999852110 01134567778899999999999999984 7777889999999995432222211 223
Q ss_pred CCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCC--Cccceeeccc---eeEEEeCCC--CCcEEEEecCCCeEEEEE
Q 019059 165 SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM--GKTNSIEHAH---VRNVDYDTK--KKHLLVTAADESGIHLWD 237 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~---v~~~~~~~~--~~~~l~~~~~dg~i~i~d 237 (346)
.+|...|.+++|+|++..|++++.|+.|++||.+++ +++..+. +| |.+++|+|+ +. .+++++.|++|++||
T Consensus 150 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 150 QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVF-RLCSGSDDSTVRVWK 227 (330)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSC-EEEEEETTSCEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCee-EEEEEeCCCeEEEEE
Confidence 457779999999999999999999999999999876 4555554 55 999999998 54 799999999999999
Q ss_pred cccCC-------cceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc--ccc
Q 019059 238 LRMLK-------APIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN--SLL 307 (346)
Q Consensus 238 ~~~~~-------~~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~ 307 (346)
++... .....+.. |...|.+++|++++ +|++++.|+.|+|||... + +..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~-------------------~~~~~~ 286 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD-------------------GEWKVF 286 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET-------------------TEEEEE
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC-------------------CceEEE
Confidence 97531 23344444 89999999999654 799999999999999876 3 222
Q ss_pred -cccccccc-eeeEEEeCC--CCCcEEEEeecCCeEEEeeecC
Q 019059 308 -NSYSDYED-SVYGLAWSS--REPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 308 -~~~~~~~~-~v~~~~~~~--~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
....+|.. .|.+++|+| ++. +|++++.|+.|++|++++
T Consensus 287 ~~~~~~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 287 AKRALCHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEESCTTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred eccccccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 23456776 899999999 565 899999999999999863
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.6e-41 Score=284.00 Aligned_cols=301 Identities=16% Similarity=0.255 Sum_probs=227.4
Q ss_pred cccceeeEeeeccC-----CC-CcceEEEeecccCCCCeEEEEEecCCC----CeEEEeeeeccccceEEeeecCCCCce
Q 019059 11 GLKYQARCISDVKA-----DT-DHTSFLTGTLSLKEENEVHLLRLSSGG----TELICEGLFSHPNEIWDLSSCPFDQRI 80 (346)
Q Consensus 11 ~~~~~~~~~~~~~~-----~~-~~~~~~~g~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l 80 (346)
.++.+...|.++.+ .+ ++..++.|. .++.|++|++.... .......+.+|...|.+++|+|++..+
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs----~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGS----RDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEE----TTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEc----CCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 34445556666655 44 667777764 67899999997643 123446678999999999999999888
Q ss_pred EEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceee
Q 019059 81 FSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ 160 (346)
Q Consensus 81 ~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~ 160 (346)
+++ +.|++|++||+. +.+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+... ....
T Consensus 92 ~s~----s~D~~v~lwd~~---------~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~---~~~~ 154 (343)
T 2xzm_R 92 ISS----SWDKTLRLWDLR---------TGTTYKRFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGE---CKFS 154 (343)
T ss_dssp EEE----ETTSEEEEEETT---------SSCEEEEEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSC---EEEE
T ss_pred EEE----cCCCcEEEEECC---------CCcEEEEEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCC---ceee
Confidence 875 699999999998 67788889999999999999999984 777788999999999732 1122
Q ss_pred ecccCCCceeeEEEEeCCCC----------CcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEe
Q 019059 161 SKQSSGMLHYLSGGAWDPHD----------VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 161 ~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~ 227 (346)
......|...+.+++|+|++ ..+++++.|+.|++||.. .+....+. +| |.+++|+|++. +|++|
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~-~h~~~v~~~~~s~~g~-~l~sg 231 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFK-AHESNVNHLSISPNGK-YIATG 231 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEE-CCSSCEEEEEECTTSS-EEEEE
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEc-CccccceEEEECCCCC-EEEEE
Confidence 22233577789999999987 679999999999999943 44444444 44 99999999998 89999
Q ss_pred cCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccc
Q 019059 228 ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL 307 (346)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (346)
+.|+.|++||++....+...+. +...|.+++|+|++ .+++++ .|+.|++||+.+...... ...... .....
T Consensus 232 s~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~-~~la~~-~d~~v~iw~~~~~~~~~~--~~~~~~----~~~~~ 302 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKL-QWVAVG-TDQGVKIFNLMTQSKAPV--CTIEAE----PITKA 302 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSS-CEEEEE-ESSCEEEEESSSCCSCSE--EECCCC----SGGGB
T ss_pred cCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCC-CEEEEE-CCCCEEEEEeCCCCCCce--EEeecC----cchhh
Confidence 9999999999965454555543 55679999999998 777655 578899999986221100 000000 00111
Q ss_pred cccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 308 NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 308 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
....+|...|.+++|+|+++ +|++++.||.|++|+++
T Consensus 303 ~~~~~~~~~v~~~~~sp~g~-~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 303 EGQKGKNPQCTSLAWNALGK-KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp TTBCCSCCCEEEEEECSSSC-CEEEEETTSEEEEEEEE
T ss_pred hhhcCCCCceEEEEECCCCC-eEEEecCCceEEEEEEE
Confidence 22346888899999999997 89999999999999985
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-41 Score=292.77 Aligned_cols=280 Identities=19% Similarity=0.278 Sum_probs=229.3
Q ss_pred eeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeecc------------------ccceEEeeecCCC
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSH------------------PNEIWDLSSCPFD 77 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~ 77 (346)
...+..+.+++++..++.|. ++.+.+|++...... ..+..| ...|.+++|+|++
T Consensus 64 ~~~V~~v~fspdg~~la~g~-----~~~v~i~~~~~g~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg 135 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGC-----NKTTQVYRVSDGSLV---ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 135 (393)
T ss_dssp SSCCCEEEECTTSSEEEEEC-----BSCEEEEETTTCCEE---EEECC-----------------CCCCBEEEEEECTTS
T ss_pred CCEEEEEEECCCCCEEEEEc-----CCcEEEEEecCCCEE---EEecCccccccccccccccccCCCceeEEEEEECCCC
Confidence 34566778899998888764 357888887654321 222222 2359999999999
Q ss_pred CceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCc
Q 019059 78 QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNA 157 (346)
Q Consensus 78 ~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 157 (346)
+.|+++ +.|+.|++||+. ..+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+.+++...
T Consensus 136 ~~l~s~----~~d~~i~iwd~~---------~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 136 KFLATG----AEDRLIRIWDIE---------NRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp SEEEEE----ETTSCEEEEETT---------TTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEE----cCCCeEEEEECC---------CCcEEEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEE
Confidence 988885 689999999998 67788889999999999999999984 7777889999999998765333
Q ss_pred eeeecccCCCceeeEEEEeCC-CCCcEEEEecCCeEEEEEccCCCccceee------ccc---eeEEEeCCCCCcEEEEe
Q 019059 158 QVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIE------HAH---VRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 158 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~---v~~~~~~~~~~~~l~~~ 227 (346)
.+. +...+..++|+| ++..+++++.|+.|++||+++++.+..+. .+| |.+++|+|++. +|+++
T Consensus 202 ~~~------~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~ 274 (393)
T 1erj_A 202 TLS------IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSG 274 (393)
T ss_dssp EEE------CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEE
T ss_pred EEE------cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEE
Confidence 222 233789999999 88999999999999999999988766552 234 99999999998 89999
Q ss_pred cCCCeEEEEEcccCC-----------cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccccc
Q 019059 228 ADESGIHLWDLRMLK-----------APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296 (346)
Q Consensus 228 ~~dg~i~i~d~~~~~-----------~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 296 (346)
+.|+.|++||++... .+...+.+|...|.+++|+|++ .+|++|+.|+.|++||+++
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iwd~~~------------ 341 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFWDKKS------------ 341 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEEETTT------------
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEEECCC------------
Confidence 999999999997532 2345677899999999999999 9999999999999999998
Q ss_pred CCccccccccccccccccceeeEEEeCC------CCCcEEEEeecCCeEEEeeec
Q 019059 297 ESPNQRANSLLNSYSDYEDSVYGLAWSS------REPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|.+++|++ +++ +|++++.|++|++|+++
T Consensus 342 -------~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 342 -------GNPLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYK 388 (393)
T ss_dssp -------CCEEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEE
T ss_pred -------CeEEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccc
Confidence 888889999999999999986 565 89999999999999985
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=290.83 Aligned_cols=254 Identities=18% Similarity=0.181 Sum_probs=202.8
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCccc--CCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY--GQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
.|+..|.+++|+|+|+.|+++ .|+++++||..... .....+..........+...|.+++|+|++. +++++
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~-----sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~--l~~~s 100 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGA-----SSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERG--ILVAS 100 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEE-----ECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTE--EEEEE
T ss_pred cccCCEEEEEECCCCCEEEEE-----eCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCe--EEEEE
Confidence 477889999999999877764 46677777632100 0000011112222335678899999999875 77888
Q ss_pred cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeC
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYD 217 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~ 217 (346)
.||.|++||+.+++...... ....+|...|.+++|+|++++|++++.|+.|++||+++++++..+. +| |.+++|+
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~-~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h~~~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSK-FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-AHAAQVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEC
T ss_pred CCCEEEEEeccCCCceeEee-ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-CcCCceEEEEec
Confidence 99999999999876543332 2234678899999999999999999999999999999999888876 55 9999999
Q ss_pred CCCCcEEEEecCCCeEEEEEcccCCcceeeec--CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccc
Q 019059 218 TKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESL 295 (346)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 295 (346)
|++..+|++++.|++|++||+++ .++...+. .|...+.+++|+|++..+|++|+.|+.|+|||+++
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~----------- 246 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS----------- 246 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----------
T ss_pred CCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-----------
Confidence 99976899999999999999997 44666554 45567999999997758999999999999999998
Q ss_pred cCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 296 VESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|++++|+|++..+|++++.|++|+|||++
T Consensus 247 --------~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 247 --------TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp ----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred --------CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 889999999999999999999986689999999999999975
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.7e-40 Score=279.28 Aligned_cols=288 Identities=14% Similarity=0.228 Sum_probs=233.7
Q ss_pred eeecccceeeEeeeccCCCCc-ceEEEeecccCCCCeEEEEEecCCCCe--EEEeeeeccccceEEeeecCCCCceEEEE
Q 019059 8 IGYGLKYQARCISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSGGTE--LICEGLFSHPNEIWDLSSCPFDQRIFSTV 84 (346)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 84 (346)
+...++.+...+..+.++++. ..++.| +.++.+.+|++...... .....+.+|...|.+++|+|++++++++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~----s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~- 83 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSA----SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA- 83 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEE----ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE-
T ss_pred EEEEEccccceEEEEEccCCCccEEEEe----cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE-
Confidence 344566677788888888765 556665 47899999999754332 3346778999999999999999988885
Q ss_pred eecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc
Q 019059 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
+.|++|++||+. +.+.+..+.+|...|.+++|+|++. ++++++.|+.|++||++.. .. ...
T Consensus 84 ---s~D~~v~~wd~~---------~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~-~~-----~~~ 144 (319)
T 3frx_A 84 ---SWDKTLRLWDVA---------TGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQ-CL-----ATL 144 (319)
T ss_dssp ---ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSC-EE-----EEE
T ss_pred ---eCCCEEEEEECC---------CCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC-eE-----EEE
Confidence 699999999998 6788889999999999999999998 4777789999999999632 11 122
Q ss_pred CCCceeeEEEEeCCCC------CcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEE
Q 019059 165 SGMLHYLSGGAWDPHD------VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHL 235 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i 235 (346)
.+|...+.+++|.|.. ..+++++.|+.|++||+++.+....+. +| |.+++|+|++. +|++++.|+.|++
T Consensus 145 ~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~sp~g~-~l~s~~~dg~i~i 222 (319)
T 3frx_A 145 LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI-GHNSNINTLTASPDGT-LIASAGKDGEIML 222 (319)
T ss_dssp CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC-CCCSCEEEEEECTTSS-EEEEEETTCEEEE
T ss_pred eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec-CCCCcEEEEEEcCCCC-EEEEEeCCCeEEE
Confidence 3567789999999854 479999999999999999887776665 55 99999999998 9999999999999
Q ss_pred EEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc-----
Q 019059 236 WDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY----- 310 (346)
Q Consensus 236 ~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 310 (346)
||++. .+++..+.. ...|.+++|+|++ .+|++++.+ .+++|++.. ...+..+
T Consensus 223 wd~~~-~~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~-------------------~~~~~~~~~~~~ 279 (319)
T 3frx_A 223 WNLAA-KKAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDP-------------------QYLVDDLRPEFA 279 (319)
T ss_dssp EETTT-TEEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETT-------------------EEEEEEECCCCT
T ss_pred EECCC-CcEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCc-------------------CeeeeccCcccc
Confidence 99997 556777764 5689999999999 888888755 599999986 3322222
Q ss_pred ---ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 311 ---SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 311 ---~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
..|...+.+++|+|+|+ +|++++.|+.|++|++.
T Consensus 280 ~~~~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 280 GYSKAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TCCGGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEE
T ss_pred ccccCcCcceeEEEECCCCC-EEEEeecCceEEEEEEe
Confidence 23566799999999997 89999999999999984
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.7e-41 Score=304.62 Aligned_cols=291 Identities=15% Similarity=0.210 Sum_probs=230.0
Q ss_pred ccceeeEeeeccCCCCcc-eEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCc
Q 019059 12 LKYQARCISDVKADTDHT-SFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d 90 (346)
+..+...+..+.++++.. +++.| +.++.+.+|+..+. .....+.+|.+.|.+++|+|+++.|+++ +.|
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~----s~D~~v~lwd~~~~---~~~~~l~~H~~~V~~v~fspdg~~las~----s~D 211 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISG----SDDNTVAIFEGPPF---KFKSTFGEHTKFVHSVRYNPDGSLFAST----GGD 211 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEE----ETTSCEEEEETTTB---EEEEEECCCSSCEEEEEECTTSSEEEEE----ETT
T ss_pred ecCCCCCceEEEECCCCCeEEEEE----eCCCeEEEEECCCC---eEeeeeccccCceEEEEECCCCCEEEEE----ECC
Confidence 344556777888888775 57666 36789999986542 2345678999999999999999988875 699
Q ss_pred ceEEEEecCcccCCCCCccceeeeeee-------ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceee---
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALD-------AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ--- 160 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~--- 160 (346)
++|++||+. .++.+..+. +|.+.|.+++|+|+++. +++++.|+.|++||+.+++....+.
T Consensus 212 ~~i~lwd~~---------~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~s~s~D~~v~lWd~~~~~~~~~~~~~~ 281 (611)
T 1nr0_A 212 GTIVLYNGV---------DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK-IASASADKTIKIWNVATLKVEKTIPVGT 281 (611)
T ss_dssp SCEEEEETT---------TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CcEEEEECC---------CCcEeeeeccccccccccCCCEEEEEECCCCCE-EEEEeCCCeEEEEeCCCCceeeeecCCC
Confidence 999999987 455555553 79999999999999984 7777899999999998754322211
Q ss_pred -----------------------------------ecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccce
Q 019059 161 -----------------------------------SKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS 205 (346)
Q Consensus 161 -----------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (346)
.....+|...|.+++|+|+++.|++++.|+.|++||+.+++....
T Consensus 282 ~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 282 RIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp SGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 112246888999999999999999999999999999886543211
Q ss_pred e-------------------------------------------------------------------------------
Q 019059 206 I------------------------------------------------------------------------------- 206 (346)
Q Consensus 206 ~------------------------------------------------------------------------------- 206 (346)
+
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 1
Q ss_pred ----eccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc-ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 207 ----EHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA-PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (346)
Q Consensus 207 ----~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iw 280 (346)
.... +.+++|+|+++ ++++|+.|+.|++||+..... .+.. .+|...|++++|+|++ .+|++++.|++|++|
T Consensus 442 ~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg-~~las~s~d~~v~~w 518 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG-AFLVATDQSRKVIPY 518 (611)
T ss_dssp EEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred eeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCC-CEEEEEcCCCCEEEE
Confidence 0011 57899999998 999999999999999986321 1233 5799999999999999 999999999999999
Q ss_pred ecCCCCCCCCCcccccCCccccccccccc--cccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 281 LVSTSNHDELPSESLVESPNQRANSLLNS--YSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+.. .+++... +..|...|++++|+|+++ +|++++.|++|++|+++
T Consensus 519 ~~~~------------------~~~~~~~~~~~~H~~~V~~v~fspdg~-~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 519 SVAN------------------NFELAHTNSWTFHTAKVACVSWSPDNV-RLATGSLDNSVIVWNMN 566 (611)
T ss_dssp EGGG------------------TTEESCCCCCCCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT
T ss_pred EcCC------------------CCceeeeeeeeecccceeEEEECCCCC-EEEEEECCCcEEEEECC
Confidence 9975 1233332 345999999999999997 99999999999999985
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-40 Score=274.92 Aligned_cols=255 Identities=17% Similarity=0.281 Sum_probs=202.2
Q ss_pred eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEE
Q 019059 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKL 137 (346)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~ 137 (346)
.+.+|.+.|.+++|+|++++|+++ +.|++|+||+++. ...+.+.++.+|.+.|.+++|+++ ++ +++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~----s~D~~v~iw~~~~-------~~~~~~~~l~gH~~~V~~v~~s~~~~g~-~l~ 71 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATC----SSDKTIKIFEVEG-------ETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILA 71 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEE----ETTSCEEEEEBCS-------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEE
T ss_pred eccCCcCceEEEEECCCCCEEEEE----eCCCEEEEEecCC-------CCcEEEEEEccccCCeEEEEecCCCcCC-EEE
Confidence 456899999999999999998885 6999999999862 134667889999999999999864 55 477
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC--CCcEEEEecCCeEEEEEccCCCcc-ceeeccc---e
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKT-NSIEHAH---V 211 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~---v 211 (346)
+++.|+.|++||++++....... ..+|...|.+++|+|+ +..+++++.|+.|++||++++... .....+| |
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v 148 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV 148 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE
T ss_pred EEcCCCEEEEEEcCCCceEEEEE---eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc
Confidence 77899999999998654221111 2346678999999997 788999999999999999876422 2222345 9
Q ss_pred eEEEeCCC-------------CCcEEEEecCCCeEEEEEcccCCc---ceeeecCCCcceEEEEeCCCC--CcEEEEecC
Q 019059 212 RNVDYDTK-------------KKHLLVTAADESGIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPEY--DGFILSAGT 273 (346)
Q Consensus 212 ~~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~v~~~~~~--~~~l~s~~~ 273 (346)
.+++|+|+ +. +|++|+.|+.|++||++.... ....+.+|...|.+++|+|++ ..+|++++.
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ceEeecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 99999997 34 899999999999999986332 456788999999999999984 389999999
Q ss_pred CCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|++|+|||++...... ...+.....|...|.+++|+|+++ +|++++.|+.|++|+..
T Consensus 228 D~~v~iWd~~~~~~~~--------------~~~~~~~~~~~~~v~~~~~s~~g~-~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPW--------------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTSCC--------------EEEESSSSCCSSCEEEEEECSSSC-CEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCCcc--------------ceeeeecccCCCcEEEEEECCCCC-EEEEEcCCCcEEEEEEC
Confidence 9999999998610000 011111246778899999999997 89999999999999864
No 22
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-40 Score=281.62 Aligned_cols=248 Identities=18% Similarity=0.251 Sum_probs=213.2
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
...+.+|.+.|.+++|+|+++.|+++ +.|+.|++||+. ..+.+..+..|...|.+++|+|+++. ++
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~----s~Dg~v~iWd~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 113 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSA----SQDGKLIIWDSY---------TTNKVHAIPLRSSWVMTCAYAPSGNY-VA 113 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEE----ETTTEEEEEETT---------TCCEEEEEECSSSCEEEEEECTTSSE-EE
T ss_pred heeecCCCCceEEEEECCCCCEEEEE----eCCCcEEEEECC---------CCCcceEeecCCccEEEEEECCCCCE-EE
Confidence 46778999999999999999988885 699999999988 66778888899999999999999984 77
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEE
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~ 214 (346)
+++.|+.|++|++.+....... .....+|...+.++.|++++. +++++.|+.|++||+++++....+. +| |.++
T Consensus 114 s~~~d~~v~iw~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~ 190 (340)
T 1got_B 114 CGGLDNICSIYNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSL 190 (340)
T ss_dssp EEETTCEEEEEETTTCSBSCEE-EEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEE
T ss_pred EEeCCCeEEEEECccCCCccee-EEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEE
Confidence 7788999999999865432222 222346777999999998765 8899999999999999998887776 45 9999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccc
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES 294 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 294 (346)
+|+|++. ++++|+.|+.|++||+++ ..++..+.+|...|++++|+|++ .+|++++.|++|++||++.
T Consensus 191 ~~~~~~~-~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~---------- 257 (340)
T 1got_B 191 SLAPDTR-LFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRA---------- 257 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCC----------
Confidence 9999998 899999999999999997 55788899999999999999999 9999999999999999997
Q ss_pred ccCCccccccccccccc--cccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 295 LVESPNQRANSLLNSYS--DYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+.+..+. .+...|++++|+|+++ +|++++.|+.|++||+.
T Consensus 258 ---------~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 258 ---------DQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp ---------TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETT
T ss_pred ---------CcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcc
Confidence 55554443 2335799999999997 99999999999999974
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-41 Score=293.58 Aligned_cols=300 Identities=18% Similarity=0.298 Sum_probs=245.2
Q ss_pred eeEeeeccCCCCcc-eEEEeeccc------CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecC
Q 019059 16 ARCISDVKADTDHT-SFLTGTLSL------KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (346)
Q Consensus 16 ~~~~~~~~~~~~~~-~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~ 88 (346)
...+..+.+++++. .+++|+... ..++.+++|++....... ......|...|.+++|+|+++.|+++ +
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~----~ 86 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK-PIASLQVDSKFNDLDWSHNNKIIAGA----L 86 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS-CSCCCCCSSCEEEEEECSSSSCEEEE----E
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc-EEEEEecCCceEEEEECCCCCeEEEE----c
Confidence 34577788999876 677775433 578899999998653211 12334689999999999999988885 5
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCC----ceeeeccc
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN----AQVQSKQS 164 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~----~~~~~~~~ 164 (346)
.|+.|++|++.... ...+.+..+..|...|.+++|+|++..++++++.|+.|++||+.+.... ........
T Consensus 87 ~dg~v~vw~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 161 (416)
T 2pm9_A 87 DNGSLELYSTNEAN-----NAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS 161 (416)
T ss_dssp SSSCEEEECCSSTT-----SCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS
T ss_pred cCCeEEEeeccccc-----ccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc
Confidence 89999999998210 0134777888999999999999995446888888999999999876511 11111223
Q ss_pred CCCceeeEEEEeCCC-CCcEEEEecCCeEEEEEccCCCccceeecc-------c-eeEEEeCCCCCcEEEEecCCC---e
Q 019059 165 SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEHA-------H-VRNVDYDTKKKHLLVTAADES---G 232 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~l~~~~~dg---~ 232 (346)
..|...+.+++|+|+ +..+++++.|+.|++||+++++....+... . +.+++|+|++..++++++.|+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 457779999999999 677888889999999999998887776642 2 999999999866899999998 9
Q ss_pred EEEEEcccCCcceeeec-CCCcceEEEEeCC-CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc
Q 019059 233 IHLWDLRMLKAPIQELP-GHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY 310 (346)
Q Consensus 233 i~i~d~~~~~~~~~~~~-~~~~~v~~v~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (346)
|++||++....++..+. +|...|.+++|+| ++ .+|++++.|+.|++||+++ ++++..+
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~-------------------~~~~~~~ 301 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPES-------------------AEQLSQF 301 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSS-------------------CCEEEEE
T ss_pred EEEEeCCCCCCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCC-------------------Cccceee
Confidence 99999998656788888 8999999999999 77 9999999999999999998 7888899
Q ss_pred ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 311 SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 311 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+|...|.+++|+|+++.+|++++.|+.|++|+++
T Consensus 302 ~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 302 PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 99999999999999984599999999999999985
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.9e-41 Score=288.17 Aligned_cols=268 Identities=18% Similarity=0.139 Sum_probs=203.1
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecC--CcceEEEEecCcccCCCCCccceeeeeeecc
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG--ESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~--~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 119 (346)
.....|.++.. ....|...|++++|+|||++|+++..... .|+.|++|+..... +..........|
T Consensus 26 ~~~~~w~~p~~-------~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~-----~~~~~~~~~~~~ 93 (357)
T 4g56_B 26 SKGSAWGRPVT-------APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA-----PNESLCTAGVQT 93 (357)
T ss_dssp ---------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--------CGGGCSEEEEC
T ss_pred ccccccCCCCC-------CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC-----cceeEecccCCC
Confidence 34455665542 22369999999999999999888631100 17889999876211 112233344578
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (346)
...|.+++|+|++. +++++.|+.|++||+.+++...... ....+|...|.+++|+|+++.|++++.|+.|++||+++
T Consensus 94 ~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~-~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 94 EAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNK-FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp SSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCC-EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEe-eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 89999999999987 6777889999999998765432221 12245777999999999999999999999999999999
Q ss_pred CCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee--cCCCcceEEEEeCCCCCcEEEEecCC
Q 019059 200 MGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL--PGHTHWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 200 ~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~v~~~~~~~~~l~s~~~d 274 (346)
++.+..+. +| |++++|+|+++.++++++.|+.|++||+++.. ++..+ ..|...+.+++|+|++..+|++|+.|
T Consensus 171 ~~~~~~~~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 171 KAVLKSYN-AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp TEEEEEEC-CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CcEEEEEc-CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc-eeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 98888776 45 99999999987689999999999999999743 44433 45678899999999876899999999
Q ss_pred CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 275 STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.|++||+++ ++++..+.+|...|++++|+|++..+|++++.|++|+|||++
T Consensus 249 ~~i~~wd~~~-------------------~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 249 GNVSLVNIKN-------------------PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp SCEEEEESSC-------------------GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred cceeEEECCC-------------------CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 9999999998 888899999999999999999986689999999999999975
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=279.09 Aligned_cols=315 Identities=16% Similarity=0.198 Sum_probs=235.3
Q ss_pred ceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCC---CCceEEEEeecCCc
Q 019059 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF---DQRIFSTVFSTGES 90 (346)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~~~~~d 90 (346)
.+...+.++.+++++.++++.......++.+.+|++.... .......+|...|.+++|+|+ +..++++ +.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~----~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD--LKLLREIEKAKPIKCGTFGATSLQQRYLATG----DFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS--EEEEEEEEESSCEEEEECTTCCTTTCCEEEE----ETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc--ccceeeecccCcEEEEEEcCCCCCCceEEEe----cCC
Confidence 3455788888999887776543221247899999998753 233444579999999999998 5777774 689
Q ss_pred ceEEEEecCcccCCCCCccce-eeeeeeccCCceEEEEe------ecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecc
Q 019059 91 YGAAIWQIPELYGQLNSPQLE-RIAALDAHVGKINCVLW------WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ 163 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~ 163 (346)
+.|++||+. ..+ ++..+..|...|.+++| +|+++ .+++++.|+.|++||+.++..........
T Consensus 90 g~i~iwd~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 90 GNLHIWNLE---------APEMPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp SCEEEECTT---------SCSSCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEECCC
T ss_pred CeEEEEeCC---------CCCccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceecccc
Confidence 999999998 444 67788899999999965 67777 47777889999999999776333333322
Q ss_pred cCCCceeeEEEE----eCCCCCcEEEEecCCeEEEEEccCCCccceeeccc-eeEEEeCC---CCCcEEEEecCCCeEEE
Q 019059 164 SSGMLHYLSGGA----WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDT---KKKHLLVTAADESGIHL 235 (346)
Q Consensus 164 ~~~~~~~v~~~~----~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~---~~~~~l~~~~~dg~i~i 235 (346)
...+...+.+++ |+|++..+++++.|+.|++||+++++......... +.+++|+| ++. .+++++.||.|++
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i 238 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHV 238 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEE
Confidence 222244788887 78999999999999999999999988755544333 99999999 787 8999999999999
Q ss_pred EEcccCCcceeeec-----CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc
Q 019059 236 WDLRMLKAPIQELP-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY 310 (346)
Q Consensus 236 ~d~~~~~~~~~~~~-----~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (346)
||++. ..++..+. +|...|++++|+|++..+|++++.||.|++||++.....................+++..+
T Consensus 239 ~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 239 FDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred EeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 99987 44444444 8999999999999993389999999999999998743221110000000001123567778
Q ss_pred ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 311 SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 311 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
.+|...|++++|+|+++.++++++.|+.|++|++++
T Consensus 318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 889999999999999984444899999999999864
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.4e-40 Score=298.81 Aligned_cols=288 Identities=13% Similarity=0.142 Sum_probs=234.0
Q ss_pred ceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceE
Q 019059 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (346)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i 93 (346)
.+...+..+.++|++..++.|. .++.+++|++...... ....+.+|.+.|.+++|+|+++.|+++.......+.|
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~----~d~~v~lWd~~~~~~~-~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v 131 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGD----VHGNVRIWDTTQTTHI-LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 131 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEE----TTSEEEEEESSSTTCC-EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CCCCceEEEEECCCCcEEEEEe----CCCCEEEeECCCCcce-eeEeecccCCceEEEEECCCCCEEEEEECCCCceeEE
Confidence 3445677888999999998885 5789999998654332 3356678999999999999999998874111123578
Q ss_pred EEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEE
Q 019059 94 AIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (346)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (346)
++||.. .....+.+|...|.+++|+|+++..+++++.|+.|++||..+.+.. ....+|...|.+
T Consensus 132 ~~wd~~-----------~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~-----~~l~~H~~~V~~ 195 (611)
T 1nr0_A 132 FLFDTG-----------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK-----STFGEHTKFVHS 195 (611)
T ss_dssp EETTTC-----------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE-----EEECCCSSCEEE
T ss_pred EEeeCC-----------CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe-----eeeccccCceEE
Confidence 888854 4556788999999999999999866788899999999998754321 223567889999
Q ss_pred EEeCCCCCcEEEEecCCeEEEEEccCCCccceeec------cc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc-
Q 019059 174 GAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH------AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA- 243 (346)
Q Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~- 243 (346)
++|+|+++.+++++.|++|++||+.++++...+.. +| |.+++|+|++. +|++++.|++|++||+++...
T Consensus 196 v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 196 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcee
Confidence 99999999999999999999999999887776632 45 99999999998 899999999999999875321
Q ss_pred -----------------------------------------ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEec
Q 019059 244 -----------------------------------------PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLV 282 (346)
Q Consensus 244 -----------------------------------------~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~ 282 (346)
+...+.+|...|++++|+|++ .+|++++.|++|++||+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~Wd~ 353 (611)
T 1nr0_A 275 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINSWDI 353 (611)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred eeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEEEEC
Confidence 123446799999999999999 99999999999999999
Q ss_pred CCCCCCCCCcccccCCcccccccccccc-ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 283 STSNHDELPSESLVESPNQRANSLLNSY-SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+ ++....+ .+|...|.+++|++++ .+++++.|+.+++|++.
T Consensus 354 ~~-------------------~~~~~~~~~~h~~~v~~~~~s~~~--~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 354 ST-------------------GISNRVFPDVHATMITGIKTTSKG--DLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp TT-------------------CCEEECSSCSCSSCEEEEEECTTS--CEEEEETTTEEEEECSS
T ss_pred CC-------------------CceeeecccCCcceEEEEEECCCC--cEEEEEcCCceEEeecC
Confidence 98 5555444 5788999999999876 47899999999999864
No 27
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-40 Score=292.46 Aligned_cols=329 Identities=9% Similarity=0.045 Sum_probs=227.6
Q ss_pred CcceeeecccceeeEeeeccCCC------CcceEEEeecc---------------cCCCCeEEEEEecCCCCeEE-Eeee
Q 019059 4 GSSGIGYGLKYQARCISDVKADT------DHTSFLTGTLS---------------LKEENEVHLLRLSSGGTELI-CEGL 61 (346)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~---------------~~~~~~i~~~~~~~~~~~~~-~~~~ 61 (346)
+..+..|.++....++.+.+... ..+.+++|+.. .+.++.|.+|++........ ...+
T Consensus 124 ~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l 203 (524)
T 2j04_B 124 KRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTI 203 (524)
T ss_dssp CSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEE
T ss_pred CcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEE
Confidence 33444555544444454444321 12788887632 34678899999976543221 2335
Q ss_pred eccccceEEeeecCC------CCceEEEEeecCCcceEEEEecCcccCCCCC--ccceeeeeeeccCCceEEEEeecCCC
Q 019059 62 FSHPNEIWDLSSCPF------DQRIFSTVFSTGESYGAAIWQIPELYGQLNS--PQLERIAALDAHVGKINCVLWWSSGR 133 (346)
Q Consensus 62 ~~h~~~v~~~~~~~~------~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~ 133 (346)
.+|.+.|.+++|+|+ +..|+++ +.|++|++||+......... ...++...+.+|...|.+++|++++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~----s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~- 278 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFV----SQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT- 278 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEE----ETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEE----ecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-
Confidence 567899999999997 3455553 68999999999732110000 0112345678899999999999865
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEE--EeCCCC-CcEEEEecCCeEEEEEccCCCccceeeccc
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG--AWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIEHAH 210 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 210 (346)
.+++++.||.|++||++++...... ..+|...|.++ .|+|++ ..|++++.|++|++||++++++...+. +|
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~----~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~ 352 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFY----DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SR 352 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEE----EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EE
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEE----eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cc
Confidence 4888899999999999865433222 23467789999 578887 788999999999999999887766554 22
Q ss_pred -----eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCC
Q 019059 211 -----VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 211 -----v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
+.+++|+|++. .+++++.|++|++||++. ...+..+.+|...|++|+|+|++ .+|++|+.|++|++||+...
T Consensus 353 ~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLH-PMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSC-CBCEEEETTTEEECCBSCSS
T ss_pred cccCcccceEeCCCcC-eEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCC-CeEEEEECCCEEEEEechHh
Confidence 78999999998 799999999999999997 44667788999999999999999 89999999999999998653
Q ss_pred CCCCCC----------cccccCCccc---------------cccccccccccccceeeEEEeCCCCC--cEEEEeecCCe
Q 019059 286 NHDELP----------SESLVESPNQ---------------RANSLLNSYSDYEDSVYGLAWSSREP--WIFASLSYDGR 338 (346)
Q Consensus 286 ~~~~~~----------~~~~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~d~~ 338 (346)
...... ......++.. ..+.++..+.+|...|.+++|+|+++ .++|+|+.||.
T Consensus 430 ~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 430 LLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp TTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred hccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCce
Confidence 111100 0011111111 12556777889999999999999952 38999999999
Q ss_pred EEEeeecC
Q 019059 339 VRNHMLEK 346 (346)
Q Consensus 339 v~vw~~~~ 346 (346)
|+||++++
T Consensus 510 vrlw~l~~ 517 (524)
T 2j04_B 510 LTLEYLSL 517 (524)
T ss_dssp EEEEECSC
T ss_pred EEEEEccc
Confidence 99999864
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.9e-39 Score=293.45 Aligned_cols=272 Identities=22% Similarity=0.387 Sum_probs=230.2
Q ss_pred eeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEE
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~v 95 (346)
...+..+.++++...++.+. .++.+.+|++... ....+.+|...|.+++|+|+++.++++ +.|+.|++
T Consensus 303 ~~~v~~~~~~~~~~~l~t~~----~d~~i~~w~~~~~----~~~~~~~~~~~v~~~~~s~~g~~l~~~----~~dg~v~~ 370 (577)
T 2ymu_A 303 SSSVWGVAFSPDGQTIASAS----DDKTVKLWNRNGQ----HLQTLTGHSSSVWGVAFSPDGQTIASA----SDDKTVKL 370 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEE----TTSCEEEEETTSC----EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEEE
T ss_pred CCCeEEEEECCCCCEEEEEe----CCCeEEEEeCCCC----eeEEEeCCCCCEEEEEECCCCCEEEEE----eCCCEEEE
Confidence 34556667778888887764 5788999986543 235567899999999999999988885 58999999
Q ss_pred EecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEE
Q 019059 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (346)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (346)
|+.. .+.+..+..|...|.+++|+|+++. +++++.|+.|++||.. ++... ...+|...+.+++
T Consensus 371 ~~~~----------~~~~~~~~~~~~~v~~~~~s~dg~~-l~~~~~d~~v~~~~~~-~~~~~-----~~~~~~~~v~~~~ 433 (577)
T 2ymu_A 371 WNRN----------GQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRN-GQLLQ-----TLTGHSSSVWGVA 433 (577)
T ss_dssp EETT----------CCEEEEEECCSSCEEEEEECTTSSC-EEEEETTSEEEEECTT-CCEEE-----EEECCSSCEEEEE
T ss_pred EcCC----------CCEEEEecCCCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCC-CCEEE-----EecCCCCCeEEEE
Confidence 9964 4677788899999999999999995 7777889999999964 22211 1234677899999
Q ss_pred eCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC
Q 019059 176 WDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT 252 (346)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 252 (346)
|+|+++.+++++.|+.|++||+. ++.+..+. +| |.+++|+|+++ +|++++.|+.|++||.. .+.+..+.+|.
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~-~~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~--~~~~~~~~~h~ 508 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRN-GQLLQTLT-GHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN--GQLLQTLTGHS 508 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETT-SCEEEEEE-CCSSCEEEEEECTTSC-EEEEEETTSEEEEEETT--SCEEEEEECCS
T ss_pred ECCCCCEEEEEcCCCEEEEEECC-CCEEEEEc-CCCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCC--CCEEEEEeCCC
Confidence 99999999999999999999964 55555555 44 99999999998 89999999999999964 55788999999
Q ss_pred cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEE
Q 019059 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS 332 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 332 (346)
..|++++|+|++ ++|++++.|+.|++||.. ++++..+.+|...|++++|+|+++ +|++
T Consensus 509 ~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~~--------------------~~~~~~~~~h~~~v~~~~fs~dg~-~l~s 566 (577)
T 2ymu_A 509 SSVRGVAFSPDG-QTIASASDDKTVKLWNRN--------------------GQLLQTLTGHSSSVWGVAFSPDGQ-TIAS 566 (577)
T ss_dssp SCEEEEEECTTS-SCEEEEETTSEEEEECTT--------------------SCEEEEEECCSSCEEEEEECTTSS-CEEE
T ss_pred CCEEEEEEcCCC-CEEEEEECcCEEEEEeCC--------------------CCEEEEEcCCCCCEEEEEEcCCCC-EEEE
Confidence 999999999999 999999999999999964 578888999999999999999997 8899
Q ss_pred eecCCeEEEee
Q 019059 333 LSYDGRVRNHM 343 (346)
Q Consensus 333 ~~~d~~v~vw~ 343 (346)
++.|++|++||
T Consensus 567 ~~~D~~i~~Wd 577 (577)
T 2ymu_A 567 ASSDKTVKLWN 577 (577)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCEEEEeC
Confidence 99999999997
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-40 Score=284.29 Aligned_cols=256 Identities=16% Similarity=0.245 Sum_probs=213.4
Q ss_pred eEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCC
Q 019059 55 ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRH 134 (346)
Q Consensus 55 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 134 (346)
......+.+|.+.|++++|+|+++.|+++ +.|++|+|||+. ..+....+..|...|.+++|+|+++.
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~----s~D~~v~iWd~~---------~~~~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSA----SQDGRLIVWNAL---------TSQKTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEE----ETTSEEEEEETT---------TTEEEEEEECCCTTCCCCEECTTSSE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEE----eCCCeEEEEECC---------CCccceEEecCCCCEEEEEECCCCCE
Confidence 34557788999999999999999998885 699999999998 67788889999999999999999984
Q ss_pred cEEEEecCCeEEEEEcCCCCCCc--eeeecccCCCceeeEEEEeCCCC-CcEEEEecCCeEEEEEccCCCccceee----
Q 019059 135 DKLVSIDEENIFLWSLDCSNKNA--QVQSKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE---- 207 (346)
Q Consensus 135 ~~~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~---- 207 (346)
+++++.|+.+++|++.+..... ........+|...+.++.|.|++ ..+++++.|++|++||+++++.+..+.
T Consensus 123 -las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~ 201 (380)
T 3iz6_a 123 -VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP 201 (380)
T ss_dssp -EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS
T ss_pred -EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC
Confidence 6777889999999997532111 11112245678889999999975 468999999999999999998776552
Q ss_pred ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 208 HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 208 ~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.+| +.+++|++.+..++++|+.|+.|++||++....++..+.+|...|++++|+|++ .+|++++.|++|++||+++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCC
Confidence 244 999999874334999999999999999986567888999999999999999999 9999999999999999998
Q ss_pred CCCCCCCcccccCCccccccccccccccc-------cceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 285 SNHDELPSESLVESPNQRANSLLNSYSDY-------EDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+..+ ...|++++|+|+++ +|++++.|+.|++||+.
T Consensus 281 -------------------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 281 -------------------GHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp -------------------TEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETT
T ss_pred -------------------CcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECC
Confidence 5555554432 23489999999997 89999999999999963
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=276.01 Aligned_cols=250 Identities=16% Similarity=0.203 Sum_probs=210.6
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
...+.+|.+.|++++|+|+++.|+++ +.|++|++||.. ..+....+..|...|.+++|+|++.. ++
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~----s~Dg~v~vWd~~---------~~~~~~~~~~~~~~v~~~~~sp~g~~-la 122 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSS----SQDGKVIVWDSF---------TTNKEHAVTMPCTWVMACAYAPSGCA-IA 122 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEE----ETTSEEEEEETT---------TCCEEEEEECSSSCCCEEEECTTSSE-EE
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEE----eCCCeEEEEECC---------CCCcceEEecCCCCEEEEEECCCCCE-EE
Confidence 46678999999999999999888875 799999999987 56677778889999999999999994 77
Q ss_pred EEecCCeEEEEEcCCCCCCce-eeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeE
Q 019059 138 VSIDEENIFLWSLDCSNKNAQ-VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRN 213 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~ 213 (346)
+++.|+.+++|++........ ........|...+.+++|+|++..+++++.|++|++||+++++.+..+. +| |.+
T Consensus 123 sg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~ 201 (354)
T 2pbi_B 123 CGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLC 201 (354)
T ss_dssp EESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEE
T ss_pred EeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEE
Confidence 778899999999875421110 0111123467789999999999999999999999999999999888876 45 999
Q ss_pred EEeCCC--CCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCC
Q 019059 214 VDYDTK--KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (346)
Q Consensus 214 ~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 291 (346)
++|+|+ +. +|++|+.||.|++||+++ ..++..+..|...|++++|+|++ .+|++++.|++|++||++.
T Consensus 202 ~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~------- 271 (354)
T 2pbi_B 202 LDLAPSETGN-TFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRA------- 271 (354)
T ss_dssp EEECCCSSCC-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT-------
T ss_pred EEEEeCCCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCC-------
Confidence 999874 55 899999999999999998 56788899999999999999999 9999999999999999997
Q ss_pred cccccCCcccccccccccccc--ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 292 SESLVESPNQRANSLLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
...+..+.. +...+.+++|+|++. +|++++.|+.|++||+.
T Consensus 272 ------------~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 272 ------------DREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ------------TEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETT
T ss_pred ------------CcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECC
Confidence 444444433 334689999999997 99999999999999974
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=273.04 Aligned_cols=267 Identities=17% Similarity=0.289 Sum_probs=206.8
Q ss_pred EEeeeecccc-ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceee-eeeeccCCceEEEEeecCCCC
Q 019059 57 ICEGLFSHPN-EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI-AALDAHVGKINCVLWWSSGRH 134 (346)
Q Consensus 57 ~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~ 134 (346)
....+.+|++ .|++++|+|+++.|+++ +.|+.|+||++.. ...... ....+|...|.+++|+|++++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~----~~D~~i~iw~~~~-------~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 75 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASC----GGDRRIRIWGTEG-------DSWICKSVLSEGHQRTVRKVAWSPCGNY 75 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEE----ETTSCEEEEEEET-------TEEEEEEEECSSCSSCEEEEEECTTSSE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEE----cCCCeEEEEEcCC-------CcceeeeeeccccCCcEEEEEECCCCCE
Confidence 3456778987 99999999999988885 6999999999872 111112 223689999999999999984
Q ss_pred cEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccce--eeccc--
Q 019059 135 DKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS--IEHAH-- 210 (346)
Q Consensus 135 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~-- 210 (346)
+++++.|+.|++|++...... ......+|...|.+++|+|+++.|++++.|+.|++||++++..... ...+|
T Consensus 76 -l~s~s~D~~v~iw~~~~~~~~---~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~ 151 (345)
T 3fm0_A 76 -LASASFDATTCIWKKNQDDFE---CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ 151 (345)
T ss_dssp -EEEEETTSCEEEEEECCC-EE---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS
T ss_pred -EEEEECCCcEEEEEccCCCeE---EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC
Confidence 777788999999999764321 1122346778999999999999999999999999999987754322 12244
Q ss_pred -eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC-cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCC
Q 019059 211 -VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (346)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 288 (346)
|.+++|+|++. +|++++.|+.|++||.+... .+...+.+|...|++++|+|++ .+|++++.|++|+|||.......
T Consensus 152 ~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 152 DVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp CEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCT
T ss_pred CeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCC
Confidence 99999999998 89999999999999998632 2456788999999999999999 99999999999999998652211
Q ss_pred CCCcccccCCcccccccccccccc-ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 289 ELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
..... ........++..+.+ |...|++++|+|++. .|++++.|+.|++|+++
T Consensus 230 ~~~~~----~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 230 QGVAC----SGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQED 282 (345)
T ss_dssp TCCCC----C---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEEC
T ss_pred cccee----eccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeC
Confidence 11000 000111234445554 888899999999997 89999999999999874
No 32
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.3e-39 Score=273.54 Aligned_cols=255 Identities=18% Similarity=0.296 Sum_probs=197.4
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~ 136 (346)
..+.+|.+.|++++|+|+++.|+++ +.|++|+|||+.. .....+..+.+|...|.+++|+++ ++ ++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasg----s~D~~v~lwd~~~-------~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l 74 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATC----SSDRSVKIFDVRN-------GGQILIADLRGHEGPVWQVAWAHPMYGN-IL 74 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEE----ETTTEEEEEEEET-------TEEEEEEEEECCSSCEEEEEECCGGGSS-CE
T ss_pred eecccccCeEEEeeEcCCCCEEEEE----eCCCeEEEEEecC-------CCcEEEEEEcCCCccEEEEEeCCCCCCC-EE
Confidence 4456899999999999999988885 6999999999972 122456788999999999999863 55 47
Q ss_pred EEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC--CCcEEEEecCCeEEEEEccCCCcc--ceeeccc--
Q 019059 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKT--NSIEHAH-- 210 (346)
Q Consensus 137 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~-- 210 (346)
++++.|+.|++||++++...... ...+|...|.+++|+|+ +..+++++.|+.|++||++.+... .....+|
T Consensus 75 ~s~s~D~~v~iWd~~~~~~~~~~---~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTWEKSH---EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp EEEETTSCEEEECCSSSCCCEEE---EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred EEEECCCEEEEEECCCCcceEEE---EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 88889999999999865322111 22457779999999998 778999999999999999876422 1222344
Q ss_pred -eeEEEeCCCC-----------------CcEEEEecCCCeEEEEEcccCC--cceeeecCCCcceEEEEeCCCC---CcE
Q 019059 211 -VRNVDYDTKK-----------------KHLLVTAADESGIHLWDLRMLK--APIQELPGHTHWTWAVCCNPEY---DGF 267 (346)
Q Consensus 211 -v~~~~~~~~~-----------------~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~v~~~~~~---~~~ 267 (346)
+.+++|+|+. . +|++|+.|+.|++||++... .++..+.+|...|.+++|+|++ ..+
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred CcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 8999999973 4 79999999999999997532 3567788999999999999985 268
Q ss_pred EEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 268 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|++++.|++|+|||++..... ......+..|...|++++|+|+++ +|++++.|+.|++|++.
T Consensus 231 las~s~D~~v~iw~~~~~~~~---------------~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDGRVFIWTCDDASSN---------------TWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEEETTCEEEEEECSSTTCC---------------CCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEEccCcccc---------------chhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEEC
Confidence 999999999999998751100 011233456788999999999997 89999999999999964
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-38 Score=295.45 Aligned_cols=288 Identities=16% Similarity=0.272 Sum_probs=230.6
Q ss_pred ccceeeEeeeccCCCCcc-eEEEeecccCCCCeEEEEEecCCCC--eEEEeeeeccccceEEeeecCCCCceEEEEeecC
Q 019059 12 LKYQARCISDVKADTDHT-SFLTGTLSLKEENEVHLLRLSSGGT--ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG 88 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~ 88 (346)
++.+...|.++.++++.. .++.| +.++.|++|++..... ......+.+|...|.+++|+|+++.|+++ +
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~----s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sg----s 449 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSA----SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSG----S 449 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEE----ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEE----E
T ss_pred cccCCceeEEEEecCCCCCEEEEE----eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEE----e
Confidence 445667788888877654 45555 4689999999976432 23456788999999999999999988885 6
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCc
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 168 (346)
.|+.|+|||+. ....+..+.+|...|.+++|+|+++. +++++.|+.|++||..... .........+|.
T Consensus 450 ~Dg~v~vwd~~---------~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~h~ 517 (694)
T 3dm0_A 450 WDGELRLWDLA---------AGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGEC--KYTISEGGEGHR 517 (694)
T ss_dssp TTSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCE--EEEECSSTTSCS
T ss_pred CCCcEEEEECC---------CCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCc--ceeeccCCCCCC
Confidence 99999999998 67788889999999999999999985 7788899999999986432 122222335677
Q ss_pred eeeEEEEeCCCC--CcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc
Q 019059 169 HYLSGGAWDPHD--VNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (346)
Q Consensus 169 ~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (346)
..|.+++|+|++ ..+++++.|+.|++||+++++....+. +| |++++|+|++. +|++++.|+.|++||+++ .+
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~-~~ 594 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE-GK 594 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTT-TE
T ss_pred CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc-CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-Cc
Confidence 889999999987 468999999999999999988877776 55 99999999998 999999999999999997 54
Q ss_pred ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc------------
Q 019059 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS------------ 311 (346)
Q Consensus 244 ~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 311 (346)
.+..+. +...|.+++|+|++ .+|++++ |+.|+|||+++ +..+..+.
T Consensus 595 ~~~~~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~-------------------~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 595 KLYSLE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLES-------------------KSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EEECCB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTT-------------------TEEEEEECCCCC--------
T ss_pred eEEEec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCC-------------------CCChhhhccccccccccccc
Confidence 666665 45689999999998 7777765 56799999987 33332221
Q ss_pred -------cccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 312 -------DYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 312 -------~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+.-.+++++|+|+++ +|++++.||.|++|++.
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred cccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEecc
Confidence 1222478999999997 89999999999999985
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-38 Score=268.55 Aligned_cols=295 Identities=14% Similarity=0.222 Sum_probs=245.9
Q ss_pred CcceeeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEE
Q 019059 4 GSSGIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFST 83 (346)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 83 (346)
|.......+..+...+..+.+++++..+++|. .++.+.+|++.... ....+.+|.+.|.+++|+|+++.|+++
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSCS----KDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEEE----SSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCCCEEEEE
Confidence 44566667777788899999999998888874 57899999987643 345667899999999999999888875
Q ss_pred EeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC-----CeEEEEEcCCCCCCce
Q 019059 84 VFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE-----ENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 84 ~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-----~~i~vwd~~~~~~~~~ 158 (346)
+.|+.|++||+. ..+.+..+. +...|.+++|+|+++. +++++.+ +.|++||+........
T Consensus 93 ----~~dg~i~iwd~~---------~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 93 ----SADYSIKLWDVS---------NGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp ----ETTTEEEEEETT---------TCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred ----eCCCeEEEEECC---------CCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCcccee
Confidence 689999999998 667777775 8889999999999994 6666667 9999999987654333
Q ss_pred eeecc------cCCCce--eeEEEEeCCCCCcEEEEecCCeEEEEEccC-CCccceeeccc---eeEEEeCCCCCcEEEE
Q 019059 159 VQSKQ------SSGMLH--YLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKTNSIEHAH---VRNVDYDTKKKHLLVT 226 (346)
Q Consensus 159 ~~~~~------~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~---v~~~~~~~~~~~~l~~ 226 (346)
..... ...+.. .+.+++|+|+++.+++++.|+.|++||+++ .+....+. .| |.+++|+|++. +|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~ 235 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLT-YFIT 235 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSS-EEEE
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCC-EEEE
Confidence 22211 112222 799999999999999999999999999998 55555555 33 99999999998 8999
Q ss_pred ecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCC--------------eEEEEecCCCCCCCCCc
Q 019059 227 AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS--------------TVNLWLVSTSNHDELPS 292 (346)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~--------------~i~iwd~~~~~~~~~~~ 292 (346)
++.|+.|++||+++ ...+..+. +...+.+++|+|++ .++++++.++ .+++||...
T Consensus 236 ~~~d~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-------- 304 (369)
T 3zwl_B 236 SSRDTNSFLVDVST-LQVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSANEGKFEARFYHKIF-------- 304 (369)
T ss_dssp EETTSEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC-------------CEEEEEETTT--------
T ss_pred ecCCceEEEEECCC-Cceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecCCCcceeEEEecCC--------
Confidence 99999999999997 44666666 78899999999999 9999999888 899999998
Q ss_pred ccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 293 ESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|++++|+|+++ +|++++.|+.|++|+++
T Consensus 305 -----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 305 -----------EEEIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFE 345 (369)
T ss_dssp -----------CCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEEC
T ss_pred -----------CcchhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECc
Confidence 888889999999999999999997 99999999999999986
No 35
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.5e-38 Score=266.89 Aligned_cols=282 Identities=16% Similarity=0.176 Sum_probs=232.2
Q ss_pred eeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEee--eeccccceEEeeecCCCCceEEEEeecCCcceE
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEG--LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i 93 (346)
...+..+.+++++..++.+. ++.+.+|++........... ..+|...|.+++|+|+++.++++ +.|+.|
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----~~d~~i 121 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG----GEASTL 121 (337)
T ss_dssp SSCCCEEEECSSSSEEEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE----ESSSEE
T ss_pred CCceEEEEEecCCcEEEEcC-----CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE----cCCCcE
Confidence 34566677888888887763 68999999987543222222 23789999999999999888875 589999
Q ss_pred EEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEE
Q 019059 94 AIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (346)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (346)
++|++.. ........+..|...|.+++|+|+++. +++++.|+.|++||+++++....+ ..|...+.+
T Consensus 122 ~~~d~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~~~d~~~~~~~~~~-----~~~~~~i~~ 188 (337)
T 1gxr_A 122 SIWDLAA-------PTPRIKAELTSSAPACYALAISPDSKV-CFSCCSDGNIAVWDLHNQTLVRQF-----QGHTDGASC 188 (337)
T ss_dssp EEEECCC-------C--EEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEE
T ss_pred EEEECCC-------CCcceeeecccCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCCCceeeee-----ecccCceEE
Confidence 9999982 223366678889999999999999884 777788999999999865432222 346668999
Q ss_pred EEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC
Q 019059 174 GAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT 252 (346)
Q Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 252 (346)
++|+|+++.+++++.|+.|++||+++++....+.... +.+++|+|+++ .+++++.++.|++||++.. ....+..|.
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~i~~~~~~~~--~~~~~~~~~ 265 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGE-WLAVGMESSNVEVLHVNKP--DKYQLHLHE 265 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSS--CEEEECCCS
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCC--CeEEEcCCc
Confidence 9999999999999999999999999998877776444 99999999998 8999999999999999863 345677899
Q ss_pred cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEE
Q 019059 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS 332 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 332 (346)
..|.+++|+|++ .+|++++.|+.|++||+.. ++.+.. ..|...|.+++|+|+++ +|++
T Consensus 266 ~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~-------------------~~~~~~-~~~~~~v~~~~~s~~~~-~l~~ 323 (337)
T 1gxr_A 266 SCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPY-------------------GASIFQ-SKESSSVLSCDISVDDK-YIVT 323 (337)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEE-EECSSCEEEEEECTTSC-EEEE
T ss_pred cceeEEEECCCC-CEEEEecCCCcEEEEECCC-------------------CeEEEE-ecCCCcEEEEEECCCCC-EEEE
Confidence 999999999999 9999999999999999998 555533 35778899999999997 8999
Q ss_pred eecCCeEEEeee
Q 019059 333 LSYDGRVRNHML 344 (346)
Q Consensus 333 ~~~d~~v~vw~~ 344 (346)
++.|+.|++|++
T Consensus 324 ~~~dg~i~iw~~ 335 (337)
T 1gxr_A 324 GSGDKKATVYEV 335 (337)
T ss_dssp EETTSCEEEEEE
T ss_pred ecCCCeEEEEEE
Confidence 999999999997
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-38 Score=267.29 Aligned_cols=251 Identities=15% Similarity=0.254 Sum_probs=205.4
Q ss_pred EEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCc
Q 019059 56 LICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHD 135 (346)
Q Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 135 (346)
.....+.+|.+.|.+++|+|++..++++ ++.|++|++|++.... .....++..+.+|...|.+++|+|++++
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s---~s~D~~v~~W~~~~~~----~~~~~~~~~~~~h~~~v~~~~~s~dg~~- 79 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLS---ASRDKTLISWKLTGDD----QKFGVPVRSFKGHSHIVQDCTLTADGAY- 79 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEE---EETTSEEEEEEEEEET----TEEEEEEEEEECCSSCEEEEEECTTSSE-
T ss_pred EEEEEEccccceEEEEEccCCCccEEEE---ecCCccEEEecCCCCC----ccccccceEEeCCcccEEEEEECCCCCE-
Confidence 3446788999999999999987555444 4799999999986211 1124567788999999999999999984
Q ss_pred EEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---ee
Q 019059 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VR 212 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~ 212 (346)
+++++.|+.|++||+.+++....+ .+|...|.+++|+|++..+++++.|+.|++||++. +++..+. +| +.
T Consensus 80 l~s~s~D~~v~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~-~h~~~v~ 152 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGETYQRF-----VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL-GHNDWVS 152 (319)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC-CCSSCEE
T ss_pred EEEEeCCCEEEEEECCCCCeeEEE-----ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEe-ccCCcEE
Confidence 777789999999999876533322 35777999999999999999999999999999974 4444444 44 99
Q ss_pred EEEeCCCCC-----cEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCC
Q 019059 213 NVDYDTKKK-----HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH 287 (346)
Q Consensus 213 ~~~~~~~~~-----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 287 (346)
+++|.|... ..+++++.|+.|++||++. ......+.+|...|.+++|+|++ .+|++++.|+.|++||++.
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg~i~iwd~~~--- 227 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDG-TLIASAGKDGEIMLWNLAA--- 227 (319)
T ss_dssp EEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTS-SEEEEEETTCEEEEEETTT---
T ss_pred EEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC---
Confidence 999998532 2799999999999999987 55777888999999999999999 9999999999999999998
Q ss_pred CCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+++..+..+ ..|.+++|+|++. +|++++ +..+++|+++
T Consensus 228 ----------------~~~~~~~~~~-~~v~~~~~sp~~~-~la~~~-~~~i~v~~~~ 266 (319)
T 3frx_A 228 ----------------KKAMYTLSAQ-DEVFSLAFSPNRY-WLAAAT-ATGIKVFSLD 266 (319)
T ss_dssp ----------------TEEEEEEECC-SCEEEEEECSSSS-EEEEEE-TTEEEEEEET
T ss_pred ----------------CcEEEEecCC-CcEEEEEEcCCCC-EEEEEc-CCCcEEEEeC
Confidence 7777777655 5699999999997 777666 4569999875
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=268.95 Aligned_cols=258 Identities=17% Similarity=0.256 Sum_probs=195.2
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee-ec-cCCceEEEEeecCCCCc
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-DA-HVGKINCVLWWSSGRHD 135 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~~ 135 (346)
...+.+|.+.|++++|+|+ .|++ ++.|+.|++|++.. ........+ .. |...|.+++|+|+++ +
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las----~~~D~~i~lw~~~~-------~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~ 72 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILAT----GSTDRKIKLVSVKY-------DDFTLIDVLDETAHKKAIRSVAWRPHTS-L 72 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEE----EESSSCEEEEECSS-------SCCEEEEEECTTCCCSCEEEEEECTTSS-E
T ss_pred ceeeccCCCceeeeccCCC--EEEE----EcCCCEEEEEEecC-------CCeEEEEEEecCCccCCEEEEEECCCCC-E
Confidence 4567799999999999986 5555 47999999999972 122444445 34 999999999999998 4
Q ss_pred EEEEecCCeEEEEEcCCCCCC--ceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCC-C---ccceeecc
Q 019059 136 KLVSIDEENIFLWSLDCSNKN--AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-G---KTNSIEHA 209 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~---~~~~~~~~ 209 (346)
+++++.|+.|++||+...... .........+|...|.+++|+|++++|++++.|+.|++||++.. . ++..+. +
T Consensus 73 las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~ 151 (330)
T 2hes_X 73 LAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-E 151 (330)
T ss_dssp EEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-C
T ss_pred EEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-c
Confidence 777788999999998643211 11112223568889999999999999999999999999999543 2 233333 4
Q ss_pred c---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC-cceeeecCCCcceEEEEeCCC--CCcEEEEecCCCeEEEEecC
Q 019059 210 H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPE--YDGFILSAGTDSTVNLWLVS 283 (346)
Q Consensus 210 ~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~v~~~~~--~~~~l~s~~~d~~i~iwd~~ 283 (346)
| |.+++|+|++. +|++++.|++|++||.+... .++..+.+|...|.+++|+|+ + .+|++++.|++|++||++
T Consensus 152 h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 152 HSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEE
T ss_pred CCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEec
Confidence 5 99999999998 89999999999999987532 467888999999999999998 5 789999999999999997
Q ss_pred CCCCCCCCcccccCCcccccccccccccc-ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 284 TSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
...... .....+...+.+ |...|++++|++++ +|++++.|+.|++|++.
T Consensus 230 ~~~~~~-----------~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 230 GDDEDD-----------QQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EECTTS-----------CEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEE
T ss_pred CCCccc-----------cceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcC
Confidence 621100 000133444544 88899999999764 68999999999999974
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-38 Score=275.80 Aligned_cols=293 Identities=15% Similarity=0.184 Sum_probs=235.5
Q ss_pred ccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCC---eEEEeeeeccccceEEeeecCC----C---CceE
Q 019059 12 LKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT---ELICEGLFSHPNEIWDLSSCPF----D---QRIF 81 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~----~---~~l~ 81 (346)
+..+...|.++.+++ ..++.|. .++.|.+|++..... ......+.+|...|.+++|+|+ + ..|+
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCS----GDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEE----TTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhcCeEEEEecC--CeEEEEc----CCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 344555677777776 5666663 678999999987641 1123556689999999999998 7 7777
Q ss_pred EEEeecCCcceEEEEecCcccCCCCCcccee-----eeeeecc-----CCceEEEEee----cCCCCcEEEEecCCeEEE
Q 019059 82 STVFSTGESYGAAIWQIPELYGQLNSPQLER-----IAALDAH-----VGKINCVLWW----SSGRHDKLVSIDEENIFL 147 (346)
Q Consensus 82 ~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~i~~~~~~----~~~~~~~~~~~~d~~i~v 147 (346)
++ +.|+.|++|++. ..+. ...+..| ...|.+++|+ |+++.++++++.|+.|++
T Consensus 86 s~----~~dg~i~iw~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~i 152 (397)
T 1sq9_A 86 TT----SFSGDLLFYRIT---------REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYI 152 (397)
T ss_dssp EE----ETTSCEEEEEEE---------ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEE
T ss_pred EE----cCCCCEEEEEcc---------CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEE
Confidence 75 589999999998 3343 6777788 5899999999 998832667788999999
Q ss_pred EEcCC------CCCCc-----eeee--cccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec------
Q 019059 148 WSLDC------SNKNA-----QVQS--KQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH------ 208 (346)
Q Consensus 148 wd~~~------~~~~~-----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------ 208 (346)
||+.+ ..... .+.. .....|...+.+++|+|++ .+++++.|+.|++||+++++.+..+..
T Consensus 153 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 153 WKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMIN 231 (397)
T ss_dssp EEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---C
T ss_pred EeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccc
Confidence 99987 44443 2221 0012356689999999999 999999999999999999988887774
Q ss_pred -cc-eeEEEeCCCCCcEEEEecCC---CeEEEEEcccCCcceeeecC-------------CCcceEEEEeCCCCCcEEEE
Q 019059 209 -AH-VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKAPIQELPG-------------HTHWTWAVCCNPEYDGFILS 270 (346)
Q Consensus 209 -~~-v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~-------------~~~~v~~v~~~~~~~~~l~s 270 (346)
.. +.+++|+|++. +|++++.| +.|++||+++ ..++..+.. |...|.+++|+|++ .+|++
T Consensus 232 ~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 308 (397)
T 1sq9_A 232 NSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETLCS 308 (397)
T ss_dssp CCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEEEE
T ss_pred cCCccceEEECCCCC-EEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCC-CEEEE
Confidence 33 99999999998 89999999 9999999997 557888888 99999999999999 99999
Q ss_pred ecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc------cc---------------cceeeEEEeCCCCC--
Q 019059 271 AGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS------DY---------------EDSVYGLAWSSREP-- 327 (346)
Q Consensus 271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~~-- 327 (346)
++.|+.|++||++. ++++..+. +| ...|++++|+|+++
T Consensus 309 ~~~dg~i~iwd~~~-------------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 309 AGWDGKLRFWDVKT-------------------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp EETTSEEEEEETTT-------------------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred EeCCCeEEEEEcCC-------------------CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 99999999999998 66777776 66 88999999999982
Q ss_pred -------cEEEEeecCCeEEEeeecC
Q 019059 328 -------WIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 328 -------~~l~s~~~d~~v~vw~~~~ 346 (346)
.+|++++.|+.|++|++++
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccceEEEecCCCcEEEEEcCC
Confidence 3899999999999999863
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-38 Score=265.84 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=208.1
Q ss_pred EEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcE
Q 019059 57 ICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDK 136 (346)
Q Consensus 57 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 136 (346)
....+.+|.+.|.+++|+|+++.|+++ +.|+.|++|++. ..+....+..|...|.+++|+|+++ .+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~----~~dg~i~iw~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~-~l 80 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASS----SADKLIKIWGAY---------DGKFEKTISGHKLGISDVAWSSDSN-LL 80 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TCCEEEEECCCSSCEEEEEECTTSS-EE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEe----eCCCeEEEEeCC---------CcccchhhccCCCceEEEEEcCCCC-EE
Confidence 346678999999999999999988885 689999999997 5677788889999999999999998 47
Q ss_pred EEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeE
Q 019059 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRN 213 (346)
Q Consensus 137 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~ 213 (346)
++++.|+.|++||+.+++....+ .+|...+.+++|+|+++.+++++.|+.|++||+++++....+. .| +.+
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~ 154 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSA 154 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEE-----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEE
Confidence 77788999999999876543332 3466689999999999999999999999999999998877776 34 999
Q ss_pred EEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCc
Q 019059 214 VDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPS 292 (346)
Q Consensus 214 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 292 (346)
++|+|++. ++++++.|+.|++||+++. ..+..+ ..+...+..++|+|++ .+|++++.|+.|++||++.
T Consensus 155 ~~~~~~~~-~l~~~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~-------- 223 (312)
T 4ery_A 155 VHFNRDGS-LIVSSSYDGLCRIWDTASG-QCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSK-------- 223 (312)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTC-CEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEEETTT--------
T ss_pred EEEcCCCC-EEEEEeCCCcEEEEECCCC-ceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCC--------
Confidence 99999998 8999999999999999974 445544 4566789999999999 9999999999999999998
Q ss_pred ccccCCccccccccccccccccceeeE--EEeC-CCCCcEEEEeecCCeEEEeeec
Q 019059 293 ESLVESPNQRANSLLNSYSDYEDSVYG--LAWS-SREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~-~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...+.. ..++ +++. +|++++.|+.|++||++
T Consensus 224 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 224 -----------GKCLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp -----------TEEEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETT
T ss_pred -----------CcEEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECC
Confidence 7778888777654332 3444 4554 89999999999999985
No 40
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.5e-38 Score=285.06 Aligned_cols=275 Identities=21% Similarity=0.376 Sum_probs=230.5
Q ss_pred eeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEE
Q 019059 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (346)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~ 94 (346)
+...+..+.+.+++..++.++ .++.+++|+.... ....+.+|...|.+++|+|+++.++++ +.|+.|+
T Consensus 261 ~~~~v~~v~~~~d~~~l~~~~----~d~~i~~w~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~t~----~~d~~i~ 328 (577)
T 2ymu_A 261 HSSSVNGVAFRPDGQTIASAS----DDKTVKLWNRNGQ----LLQTLTGHSSSVWGVAFSPDGQTIASA----SDDKTVK 328 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTSC----EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSCEE
T ss_pred CCCCEEEEEEcCCCCEEEEEe----CCCEEEEEeCCCc----EEEEEecCCCCeEEEEECCCCCEEEEE----eCCCeEE
Confidence 344566677788888887764 5678999985432 335677899999999999999988875 5899999
Q ss_pred EEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEE
Q 019059 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (346)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (346)
+||+. ...+..+..|...|.+++|+|+++. +++++.|+.|++||.. ++.... ..+|...|.++
T Consensus 329 ~w~~~----------~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~v~~~~~~-~~~~~~-----~~~~~~~v~~~ 391 (577)
T 2ymu_A 329 LWNRN----------GQHLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWNRN-GQLLQT-----LTGHSSSVRGV 391 (577)
T ss_dssp EEETT----------SCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETT-CCEEEE-----EECCSSCEEEE
T ss_pred EEeCC----------CCeeEEEeCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEcCC-CCEEEE-----ecCCCCCeEEE
Confidence 99986 3455677899999999999999994 6677889999999964 222111 23466789999
Q ss_pred EeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC
Q 019059 175 AWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH 251 (346)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 251 (346)
+|+|+++.+++++.|+.|++||. +++....+. +| |.+++|+|++. ++++++.|+.|++||.. .+.+..+.+|
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~-~~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~--~~~~~~~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRN--GQLLQTLTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETT--SCEEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec-CCCCCeEEEEECCCCC-EEEEEcCCCEEEEEECC--CCEEEEEcCC
Confidence 99999999999999999999995 455555555 44 99999999998 89999999999999975 4578888999
Q ss_pred CcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEE
Q 019059 252 THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFA 331 (346)
Q Consensus 252 ~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 331 (346)
...|++++|+|++ .+|++++.|+.|++||.. ++++..+.+|...|++++|+|+++ +|+
T Consensus 467 ~~~v~~~~~spd~-~~las~~~d~~i~iw~~~--------------------~~~~~~~~~h~~~v~~l~~s~dg~-~l~ 524 (577)
T 2ymu_A 467 SSSVRGVAFSPDG-QTIASASDDKTVKLWNRN--------------------GQLLQTLTGHSSSVRGVAFSPDGQ-TIA 524 (577)
T ss_dssp SSCEEEEEECTTS-CEEEEEETTSEEEEEETT--------------------SCEEEEEECCSSCEEEEEECTTSS-CEE
T ss_pred CCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCC--------------------CCEEEEEeCCCCCEEEEEEcCCCC-EEE
Confidence 9999999999999 999999999999999964 578888999999999999999997 899
Q ss_pred EeecCCeEEEeeec
Q 019059 332 SLSYDGRVRNHMLE 345 (346)
Q Consensus 332 s~~~d~~v~vw~~~ 345 (346)
+++.|+.|++||.+
T Consensus 525 s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 525 SASDDKTVKLWNRN 538 (577)
T ss_dssp EEETTSEEEEECTT
T ss_pred EEECcCEEEEEeCC
Confidence 99999999999965
No 41
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-38 Score=276.69 Aligned_cols=305 Identities=15% Similarity=0.152 Sum_probs=234.0
Q ss_pred eEeeeccCCCCcc-eEEEeecccCCCCeEEEEEe----cCCCC--eE-EEeeeec----------cccceEEeeecCCCC
Q 019059 17 RCISDVKADTDHT-SFLTGTLSLKEENEVHLLRL----SSGGT--EL-ICEGLFS----------HPNEIWDLSSCPFDQ 78 (346)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~----~~~~~--~~-~~~~~~~----------h~~~v~~~~~~~~~~ 78 (346)
..+.++.+++++. .+++|. .++.+.+|++ ..... .+ ....+.. |.+.|.+++|+|+++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGE----KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEE----TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred CceEEEEECCCCCcEEEEec----CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 4677788889888 888774 5789999999 54431 00 1112222 678999999999998
Q ss_pred ceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCce
Q 019059 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 158 (346)
.|+++ +.|+.|++|+. ..+.+..+..|...|.+++|+|+++. +++++.|+.|++||+.+++....
T Consensus 122 ~l~~~----~~dg~i~i~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 122 SIVTG----VENGELRLWNK----------TGALLNVLNFHRAPIVSVKWNKDGTH-IISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp EEEEE----ETTSCEEEEET----------TSCEEEEECCCCSCEEEEEECTTSSE-EEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEE----eCCCeEEEEeC----------CCCeeeeccCCCccEEEEEECCCCCE-EEEEecCCeEEEEECCCCcEEEE
Confidence 88885 58999999994 45777888899999999999999984 67778899999999976542221
Q ss_pred eee---------------------------------------------------cccCCCceeeEEEEeCCCCCcEEEEe
Q 019059 159 VQS---------------------------------------------------KQSSGMLHYLSGGAWDPHDVNAVAAT 187 (346)
Q Consensus 159 ~~~---------------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (346)
+.. .....|...+.+++|+|+++.+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 110 01224667899999999999999999
Q ss_pred cCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC
Q 019059 188 CESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
.|+.|++||+++++....+. .| +.+++|+|++ .+++++.|+.|++||+++ ..++..+..|...|.+++|+|++
T Consensus 267 ~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 267 DDGTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDG 342 (425)
T ss_dssp TTSCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTS
T ss_pred CCCEEEEEECCCCccceEec-CCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEEEEcCCC
Confidence 99999999999988887775 33 9999999988 788999999999999987 55788888999999999999999
Q ss_pred CcEEEEecCCCeEEEEecCCCCCCCCCcc-cccCCccccccccccccccccc--eeeEEEeCCCCCcEEEEeecCCeEEE
Q 019059 265 DGFILSAGTDSTVNLWLVSTSNHDELPSE-SLVESPNQRANSLLNSYSDYED--SVYGLAWSSREPWIFASLSYDGRVRN 341 (346)
Q Consensus 265 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~d~~v~v 341 (346)
.+|++++.|+.|++||++.......... ...........+++..+.+|.. .|++++|+|+++ +|++++.|+.|++
T Consensus 343 -~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i 420 (425)
T 1r5m_A 343 -QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSV 420 (425)
T ss_dssp -SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEE
T ss_pred -CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEE
Confidence 9999999999999999987211000000 0000000011226778888866 899999999997 8999999999999
Q ss_pred eeecC
Q 019059 342 HMLEK 346 (346)
Q Consensus 342 w~~~~ 346 (346)
|++++
T Consensus 421 w~~~g 425 (425)
T 1r5m_A 421 VAIPG 425 (425)
T ss_dssp EECCC
T ss_pred EeecC
Confidence 99975
No 42
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.5e-37 Score=261.30 Aligned_cols=297 Identities=16% Similarity=0.209 Sum_probs=231.3
Q ss_pred ecccceeeEeeeccCCCCc-ceEEEeecccCCCCeEEEEEecCCC--CeEEEeeeeccccceEEeeecCCCCceEEEEee
Q 019059 10 YGLKYQARCISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSGG--TELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS 86 (346)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~ 86 (346)
..|+.+..+|.++.++|+. ..++.| +.|+.|.+|++.... .......+.+|...|.+++|+|+++.|+++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~----s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~--- 104 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSA----SRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG--- 104 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEE----ETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE---
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEE----cCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE---
Confidence 3456677788999999875 455555 468999999998653 234456778999999999999999988885
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG 166 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 166 (346)
+.|+.|++|+.. ..........+...+..+.+++++.. +++++.|+.+++||+.... .......+
T Consensus 105 -~~d~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~----~~~~~~~~ 169 (340)
T 4aow_A 105 -SWDGTLRLWDLT---------TGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVC----KYTVQDES 169 (340)
T ss_dssp -ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCE----EEEECSSS
T ss_pred -cccccceEEeec---------ccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCc----eEEEEecc
Confidence 699999999998 56666677788889999999999885 7777889999999987432 22223345
Q ss_pred CceeeEEEEeCCCCC--cEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccC
Q 019059 167 MLHYLSGGAWDPHDV--NAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (346)
|...+..++|++++. .+++++.|+.|++||+++++....+. +| |++++|+|+++ +|++++.|+.|++||++.
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~- 246 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNE- 246 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTT-
T ss_pred ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-CCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEecc-
Confidence 677899999988754 46778889999999999998877776 45 99999999998 899999999999999997
Q ss_pred CcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEE
Q 019059 242 KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (346)
Q Consensus 242 ~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (346)
..++..+. +...+.++.|+|++ . +++++.|+.|++||++....... ...........+|...|++++
T Consensus 247 ~~~~~~~~-~~~~v~~~~~~~~~-~-~~~~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~h~~~v~~l~ 313 (340)
T 4aow_A 247 GKHLYTLD-GGDIINALCFSPNR-Y-WLCAATGPSIKIWDLEGKIIVDE----------LKQEVISTSSKAEPPQCTSLA 313 (340)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSS-S-EEEEEETTEEEEEETTTTEEEEE----------ECCC-------CCCCCEEEEE
T ss_pred Cceeeeec-CCceEEeeecCCCC-c-eeeccCCCEEEEEECCCCeEEEe----------ccccceeeeccCCCCCEEEEE
Confidence 55677776 45689999999987 5 55666799999999986100000 000111223446888999999
Q ss_pred eCCCCCcEEEEeecCCeEEEeeec
Q 019059 322 WSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 322 ~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+|+++ +|++++.||.|+||+++
T Consensus 314 ~s~dg~-~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 314 WSADGQ-TLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp ECTTSS-EEEEEETTSCEEEEEEE
T ss_pred ECCCCC-EEEEEeCCCEEEEEeCC
Confidence 999997 89999999999999986
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-38 Score=273.84 Aligned_cols=255 Identities=15% Similarity=0.218 Sum_probs=201.4
Q ss_pred eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC------------------C
Q 019059 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV------------------G 121 (346)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 121 (346)
...+|.+.|.+++|+|++++|+++ .++.+++|++. .++.+..+..|. .
T Consensus 59 ~~~~h~~~V~~v~fspdg~~la~g-----~~~~v~i~~~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (393)
T 1erj_A 59 KSLDHTSVVCCVKFSNDGEYLATG-----CNKTTQVYRVS---------DGSLVARLSDDSAANKDPENLNTSSSPSSDL 124 (393)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEE-----CBSCEEEEETT---------TCCEEEEECC-----------------CCCC
T ss_pred EecCCCCEEEEEEECCCCCEEEEE-----cCCcEEEEEec---------CCCEEEEecCccccccccccccccccCCCce
Confidence 344799999999999999988774 46799999997 455555554332 2
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (346)
.|.+++|+|+++. +++++.|+.|++||+.+++... ...+|...|.+++|+|++..+++++.|+.|++||+++++
T Consensus 125 ~v~~v~~s~dg~~-l~s~~~d~~i~iwd~~~~~~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 125 YIRSVCFSPDGKF-LATGAEDRLIRIWDIENRKIVM-----ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp BEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEE-----EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEE-----EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 4999999999984 7777889999999998654222 224577799999999999999999999999999999998
Q ss_pred ccceeeccc-eeEEEeCC-CCCcEEEEecCCCeEEEEEcccCCcceeee-------cCCCcceEEEEeCCCCCcEEEEec
Q 019059 202 KTNSIEHAH-VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQEL-------PGHTHWTWAVCCNPEYDGFILSAG 272 (346)
Q Consensus 202 ~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~v~~v~~~~~~~~~l~s~~ 272 (346)
+...+.... +.+++|+| ++. ++++++.|+.|++||+++ ...+..+ .+|...|.+++|+|++ .+|++++
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s 275 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGS 275 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTS-SEEEEEE
T ss_pred eEEEEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEe
Confidence 877776444 99999999 666 899999999999999987 4455544 5789999999999999 9999999
Q ss_pred CCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 273 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.|+.|++||++........ .....+.+...+.+|...|.+++|+|++. +|++++.|+.|++||++
T Consensus 276 ~d~~v~~wd~~~~~~~~~~-------~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDS-------KTPNSGTCEVTYIGHKDFVLSVATTQNDE-YILSGSKDRGVLFWDKK 340 (393)
T ss_dssp TTSEEEEEEC----------------------CEEEEEECCSSCEEEEEECGGGC-EEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCCCCCcccc-------cCCCCCcceEEEecccCcEEEEEECCCCC-EEEEEeCCCeEEEEECC
Confidence 9999999999862211000 00011345566778999999999999997 89999999999999975
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-38 Score=271.05 Aligned_cols=288 Identities=12% Similarity=0.152 Sum_probs=225.3
Q ss_pred eeeEeeeccCCCC----cceEEEeecccCCCCeEEEEEecCCCCeEEEeeee--ccccceEEeeecCC----CCceEEEE
Q 019059 15 QARCISDVKADTD----HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF--SHPNEIWDLSSCPF----DQRIFSTV 84 (346)
Q Consensus 15 ~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~----~~~l~~~~ 84 (346)
+...|..+.++|+ ...++++. .++.+.+|++...+......... .|...|.+++|+|+ ++.|+++
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~----~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~- 91 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATV----GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA- 91 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEE----ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE-
T ss_pred CCCceEEEEEecccCCCCceEEEEC----CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe-
Confidence 4556777777763 33344432 35689999998654433333222 36788999999998 4456664
Q ss_pred eecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeec-CCCCcEEEEecCCeEEEEEcCCCCCCceeeecc
Q 019059 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS-SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ 163 (346)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~ 163 (346)
+.|+.|++||+. ..+.+..+..|...|.+++|+| ++. ++++++.|+.|++||+.+++....+ ..
T Consensus 92 ---~~dg~i~v~d~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~--~~ 156 (366)
T 3k26_A 92 ---GSRGIIRIINPI---------TMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTLVAIF--GG 156 (366)
T ss_dssp ---ETTCEEEEECTT---------TCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEEEEEE--CS
T ss_pred ---cCCCEEEEEEch---------hceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeEEEEe--cc
Confidence 689999999998 6778888989999999999999 555 5777788999999999866432222 11
Q ss_pred cCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec---------------------------cc---eeE
Q 019059 164 SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH---------------------------AH---VRN 213 (346)
Q Consensus 164 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------------------------~~---v~~ 213 (346)
...|...+.+++|+|++..+++++.|+.|++||+++++....+.. .| |.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 235677999999999999999999999999999998765443321 13 999
Q ss_pred EEeCCCCCcEEEEecCCCeEEEEEcccCCc-------------ceeeecCCCcceEEEEeCCC--CCcEEEEecCCCeEE
Q 019059 214 VDYDTKKKHLLVTAADESGIHLWDLRMLKA-------------PIQELPGHTHWTWAVCCNPE--YDGFILSAGTDSTVN 278 (346)
Q Consensus 214 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------~~~~~~~~~~~v~~v~~~~~--~~~~l~s~~~d~~i~ 278 (346)
++|+ ++ ++++++.|+.|++||+++... .+..+..|...|++++|+|+ + .+|++++.||.|+
T Consensus 237 ~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~ 312 (366)
T 3k26_A 237 VRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLY 312 (366)
T ss_dssp EEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEE
T ss_pred EEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEE
Confidence 9998 55 899999999999999986432 36677789999999999999 8 9999999999999
Q ss_pred EEecCCCCCCCCCcccccCCccccccccc----cccccc--cceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 279 LWLVSTSNHDELPSESLVESPNQRANSLL----NSYSDY--EDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 279 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
+||++. +++. ..+.+| ...|++++|+|+++ +|++++.||.|++||+.+
T Consensus 313 vwd~~~-------------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 313 VWDLEV-------------------EDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECCS-------------------SSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred EEECCC-------------------CCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 999997 4433 366666 68899999999997 899999999999999863
No 45
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.4e-39 Score=275.38 Aligned_cols=291 Identities=10% Similarity=0.023 Sum_probs=216.3
Q ss_pred eeeccCCCCcceEEEeecc---cCCCCeEEEEEecCCCCe-------EEEeeeeccccceEEeeecCCCCceEEEEee--
Q 019059 19 ISDVKADTDHTSFLTGTLS---LKEENEVHLLRLSSGGTE-------LICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-- 86 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~---~~~~~~i~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~-- 86 (346)
|.++.+.+++..++.|.-. .+-+|.|.+|++...... .....+.+|...|.++++. +..+++++.+
T Consensus 17 V~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~ 94 (365)
T 4h5i_A 17 AYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENS 94 (365)
T ss_dssp EEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCH
T ss_pred EEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCc
Confidence 5566677788888887421 234678999999875432 1223466788888888765 4555554321
Q ss_pred -----cCCcceEEEEecCcccCCCCCccceeeee-----eeccCCceEEEEeecCCCCcEEEE-ecCCeEEEEEcCCCCC
Q 019059 87 -----TGESYGAAIWQIPELYGQLNSPQLERIAA-----LDAHVGKINCVLWWSSGRHDKLVS-IDEENIFLWSLDCSNK 155 (346)
Q Consensus 87 -----~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~-~~d~~i~vwd~~~~~~ 155 (346)
++.|+.+++|++..... ..+.... ...+...+.+++|+|||+.+++++ +.|+.|++||+.+.+.
T Consensus 95 ~~l~s~~~d~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 95 TKITQGKGNKHLRKFKYDKVND-----QLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp HHHHHTSCCCCEEEEEEETTTT-----EEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred cEEEEecCCCcEEEEEecCCCc-----eEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 34688899999863111 1122222 123445689999999999755555 4689999999987654
Q ss_pred CceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcccee-eccc---eeEEEeCCCCCcEEEEecCCC
Q 019059 156 NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI-EHAH---VRNVDYDTKKKHLLVTAADES 231 (346)
Q Consensus 156 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~---v~~~~~~~~~~~~l~~~~~dg 231 (346)
...+. |...|.+++|+|+++++++++. +.+++|+..+++..... ...| +.+++|+|++. .+++++.|+
T Consensus 170 ~~~~~------~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~ 241 (365)
T 4h5i_A 170 KFEIE------TRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKK 241 (365)
T ss_dssp EEEEE------CSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESS
T ss_pred EEEeC------CCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCC
Confidence 33321 3447999999999998888874 55777777777655432 2234 99999999998 788887776
Q ss_pred ----eEEEEEcccCCc---ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 232 ----GIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 232 ----~i~i~d~~~~~~---~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
.+++||+..... ....+.+|..+|++++|+|+| ++||+|+.|++|+|||+++ +
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~-------------------~ 301 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKD-------------------L 301 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTT-------------------T
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCC-------------------C
Confidence 688899875332 234567899999999999999 9999999999999999998 7
Q ss_pred ccccc-cccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 305 SLLNS-YSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 305 ~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++.. +.+|...|++++|+|+++ +||++|.|++|+||++.
T Consensus 302 ~~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 302 SMSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECC
T ss_pred cEEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcC
Confidence 88876 578999999999999997 99999999999999984
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.6e-38 Score=269.03 Aligned_cols=307 Identities=16% Similarity=0.163 Sum_probs=231.9
Q ss_pred eeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEE
Q 019059 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (346)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~ 94 (346)
+...+..+.+++++..+++|. .++.+.+|++...+ ......+.+|...|.+++|+|+++.++++ +.|+.|+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~----~d~~v~i~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----~~dg~i~ 77 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAPDSNRIVTC----GTDRNAY 77 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEEC----SSSEEEEEEEETTE-EEEEEEEECCSSCEEEEEEETTTTEEEEE----ETTSCEE
T ss_pred cCCCeEEEEECCCCCEEEEEe----CCCEEEEEeCCCCc-EEeeeeecCCCCcccEEEEeCCCCEEEEE----cCCCeEE
Confidence 455678888888998888874 57899999987752 22345667899999999999999888875 5899999
Q ss_pred EEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEE
Q 019059 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG 174 (346)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (346)
+||+.. ........+..|...|.+++|+|+++. +++++.|+.|++||++...... ........|...+.++
T Consensus 78 vwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~-~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 78 VWTLKG-------RTWKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWW-VCKHIKKPIRSTVLSL 148 (372)
T ss_dssp EEEEET-------TEEEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEE-EEEEECTTCCSCEEEE
T ss_pred EEECCC-------CeeeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcce-eeeeeecccCCCeeEE
Confidence 999971 122333445678999999999999984 7777889999999998765321 1222224566789999
Q ss_pred EeCCCCCcEEEEecCCeEEEEEcc------------------CCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeE
Q 019059 175 AWDPHDVNAVAATCESSVQFWDLR------------------SMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGI 233 (346)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~------------------~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i 233 (346)
+|+|++..+++++.|+.|++||++ .++....+. .| +.+++|+|++. .+++++.|+.|
T Consensus 149 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i 226 (372)
T 1k8k_C 149 DWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGS-RVAWVSHDSTV 226 (372)
T ss_dssp EECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSS-EEEEEETTTEE
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCC-EEEEEeCCCEE
Confidence 999999999999999999999964 455555554 33 99999999998 89999999999
Q ss_pred EEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC--CCC---CCCCccc-ccC---Ccc----
Q 019059 234 HLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST--SNH---DELPSES-LVE---SPN---- 300 (346)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~--~~~---~~~~~~~-~~~---~~~---- 300 (346)
++||+++ ..++..+..|..+|.+++|+|++ .+|+++ .|+.|++|+++. +.- ....... ... ...
T Consensus 227 ~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (372)
T 1k8k_C 227 CLADADK-KMAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 303 (372)
T ss_dssp EEEEGGG-TTEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHH
T ss_pred EEEECCC-CceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhh
Confidence 9999998 55888899999999999999999 888887 899999999986 210 0000000 000 000
Q ss_pred --ccccccc------ccc-ccccceeeEEEeC-CCC---CcEEEEeecCCeEEEeeec
Q 019059 301 --QRANSLL------NSY-SDYEDSVYGLAWS-SRE---PWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 301 --~~~~~~~------~~~-~~~~~~v~~~~~~-~~~---~~~l~s~~~d~~v~vw~~~ 345 (346)
...+... ..+ .+|...|++++|+ +++ . +|++++.||.|++|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 304 NLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp HCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEETTSEEEEEEHH
T ss_pred hcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEecCCCceEEEEec
Confidence 0001111 223 4899999999977 454 5 99999999999999974
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-39 Score=278.75 Aligned_cols=317 Identities=14% Similarity=0.225 Sum_probs=231.1
Q ss_pred eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCC-eEEEeeeeccccceEEeeecCC-CCceEEEEeecCCcceEE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT-ELICEGLFSHPNEIWDLSSCPF-DQRIFSTVFSTGESYGAA 94 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~~~~~d~~i~ 94 (346)
..+..+.+++++..++.|. .++.+.+|++..... ......+.+|...|.+++|+|+ +..+++ ++.|+.|+
T Consensus 68 ~~v~~~~~s~~~~~l~~~~----~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----~~~dg~v~ 139 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGAL----DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLAS----GGNNGEIF 139 (416)
T ss_dssp SCEEEEEECSSSSCEEEEE----SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEE----ECSSSCEE
T ss_pred CceEEEEECCCCCeEEEEc----cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEE----EcCCCeEE
Confidence 3466677788888888874 578999999887321 1244677789999999999998 555555 37899999
Q ss_pred EEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecc-cCCCceeeEE
Q 019059 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-SSGMLHYLSG 173 (346)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~ 173 (346)
+||+.................+..|...|.+++|+|++..++++++.|+.|++||+++++....+.... ..+|...+.+
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 999983210000000112233467899999999999966567777889999999998765433332211 1223568999
Q ss_pred EEeCCCC-CcEEEEecCC---eEEEEEccCC-Cccceeeccc---eeEEEeCC-CCCcEEEEecCCCeEEEEEcccCCcc
Q 019059 174 GAWDPHD-VNAVAATCES---SVQFWDLRSM-GKTNSIEHAH---VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAP 244 (346)
Q Consensus 174 ~~~~~~~-~~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~---v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~ 244 (346)
++|+|++ ..+++++.|+ .|++||++++ ++...+..+| |.+++|+| ++. +|++++.|+.|++||+++ .++
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~~dg~v~~wd~~~-~~~ 297 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH-LLLSSGRDNTVLLWNPES-AEQ 297 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS-CEEEEESSSEEEEECSSS-CCE
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC-eEEEEeCCCCEEEeeCCC-Ccc
Confidence 9999997 4677888888 9999999987 4445444144 99999999 776 899999999999999997 568
Q ss_pred eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccc---cc--------------CCccccccccc
Q 019059 245 IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES---LV--------------ESPNQRANSLL 307 (346)
Q Consensus 245 ~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~--------------~~~~~~~~~~~ 307 (346)
+..+..|...|.+++|+|+++.+|++++.|+.|++||+............ .. ..........
T Consensus 298 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 376 (416)
T 2pm9_A 298 LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL- 376 (416)
T ss_dssp EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCC-
T ss_pred ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-
Confidence 88899999999999999998779999999999999999875432221110 00 0000000011
Q ss_pred cccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 308 NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 308 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.....|..++.+++|+|+|+ +|++++.|+.|+||+++
T Consensus 377 ~~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 377 QAPTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCC
T ss_pred cCCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEec
Confidence 22233677788999999997 99999999999999986
No 48
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-37 Score=267.43 Aligned_cols=285 Identities=12% Similarity=0.117 Sum_probs=218.6
Q ss_pred ecccceeeEeeeccCCCCc-ceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecC-CCCceEEEEeec
Q 019059 10 YGLKYQARCISDVKADTDH-TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCP-FDQRIFSTVFST 87 (346)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~~~ 87 (346)
..+..+...+.++.+++++ ..++.|. .++.+.+|++....... .....+|...|.+++|+| ++..++++
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~---- 137 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGS----KGGDIILWDYDVQNKTS-FIQGMGPGDAITGMKFNQFNTNQLFVS---- 137 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEE----BTSCEEEEETTSTTCEE-EECCCSTTCBEEEEEEETTEEEEEEEE----
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEc----CCCeEEEEeCCCcccce-eeecCCcCCceeEEEeCCCCCCEEEEE----
Confidence 3444455678888888888 7777774 57899999998754332 234457999999999999 55666664
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeee---eccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAAL---DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
+.|+.|++||+. . ..+..+ ..|...|.+++|+|+++ .+++++.|+.|++||++ ++.... .
T Consensus 138 ~~d~~i~iwd~~---------~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~-----~ 200 (383)
T 3ei3_B 138 SIRGATTLRDFS---------G-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD-GHEIFK-----E 200 (383)
T ss_dssp ETTTEEEEEETT---------S-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT-SCEEEE-----E
T ss_pred eCCCEEEEEECC---------C-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC-CCEEEE-----e
Confidence 689999999997 2 333334 34458899999999998 47777889999999994 332222 2
Q ss_pred CCCceeeEEEEeCCCCC-cEEEEecCCeEEEEEccC----CCccceeeccc-eeEEEeCC-CCCcEEEEecCCCeEEEEE
Q 019059 165 SGMLHYLSGGAWDPHDV-NAVAATCESSVQFWDLRS----MGKTNSIEHAH-VRNVDYDT-KKKHLLVTAADESGIHLWD 237 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~dg~i~i~d 237 (346)
.+|...|.+++|+|+++ .+++++.|+.|++||+++ +.....+.... |.+++|+| ++. +|++++.|+.|++||
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd 279 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYS 279 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEE
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEE
Confidence 24667999999999999 788999999999999998 44444443223 99999999 888 899999999999999
Q ss_pred cccCCcceeeecCCC-----------------cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcc
Q 019059 238 LRMLKAPIQELPGHT-----------------HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 238 ~~~~~~~~~~~~~~~-----------------~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
+++.. ....+..|. ..+..++|+|++ .+ +++.|+.|++||+.+
T Consensus 280 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~~---------------- 339 (383)
T 3ei3_B 280 SYDWS-KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDANS---------------- 339 (383)
T ss_dssp TTBTT-SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETTT----------------
T ss_pred CCCCc-cccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecCC----------------
Confidence 99743 444554332 234457777777 55 888999999999998
Q ss_pred cccccccccccc--ccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 301 QRANSLLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 301 ~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
++++..+.+ |...+..++|+|+++ +|++++ |+.|++|++++
T Consensus 340 ---~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 340 ---GGLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp ---CCEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred ---CceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 788888876 556778889999997 888887 99999999864
No 49
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-37 Score=261.79 Aligned_cols=251 Identities=16% Similarity=0.200 Sum_probs=197.9
Q ss_pred EeeeeccccceEEeee-----cC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC
Q 019059 58 CEGLFSHPNEIWDLSS-----CP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS 131 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~-----~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (346)
...+.+|.+.|++++| ++ +++.|+++ +.|++|++||+..... ......+...+.+|...|.+++|+|+
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sg----s~D~~v~iWd~~~~~~--~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISG----SRDKTVMIWKLYEEEQ--NGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEE----ETTSCEEEEEECSSCC--SSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEE----cCCCEEEEEECCcCCc--ccccccccchhccCCCceEEEEECCC
Confidence 4567899999999999 76 77777764 7999999999873111 11124566778899999999999999
Q ss_pred CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee-ccc
Q 019059 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-HAH 210 (346)
Q Consensus 132 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~ 210 (346)
+. ++++++.|+.|++||+.+++....+ .+|...|.+++|+|+++.+++++.|+.|++||+.......... ..|
T Consensus 88 ~~-~l~s~s~D~~v~lwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 161 (343)
T 2xzm_R 88 NC-FAISSSWDKTLRLWDLRTGTTYKRF-----VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENH 161 (343)
T ss_dssp TT-EEEEEETTSEEEEEETTSSCEEEEE-----ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSC
T ss_pred CC-EEEEEcCCCcEEEEECCCCcEEEEE-----cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCC
Confidence 98 4677789999999999876543332 3477799999999999999999999999999998433222111 133
Q ss_pred ---eeEEEeCCCC----------CcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeE
Q 019059 211 ---VRNVDYDTKK----------KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (346)
Q Consensus 211 ---v~~~~~~~~~----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i 277 (346)
+.+++|+|++ . ++++++.|+.|++||.+ ......+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v 237 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKL 237 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEE
T ss_pred CceeeeeeeccccccccccCCCCC-EEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCC-CEEEEEcCCCeE
Confidence 9999999987 4 89999999999999954 44677888999999999999999 999999999999
Q ss_pred EEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 278 NLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++||++.. ..+...+ .+...|.+++|+|++. +++ ++.|+.|++|++.
T Consensus 238 ~iwd~~~~------------------~~~~~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 238 LIWDILNL------------------TYPQREF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLM 284 (343)
T ss_dssp EEEESSCC------------------SSCSEEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESS
T ss_pred EEEECCCC------------------cccceee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeC
Confidence 99999540 2233333 2445699999999986 555 5568899999974
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.1e-36 Score=265.75 Aligned_cols=262 Identities=16% Similarity=0.211 Sum_probs=215.3
Q ss_pred CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeecc
Q 019059 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 119 (346)
.++.|++|+..... ......+.+|...|++++|+|++++|+++ +.|+.|++||+. ..+.+..+.+|
T Consensus 123 ld~tV~lWd~~tg~-~~~~~~~~~~~~~V~sv~fspdg~~lasg----s~Dg~v~iWd~~---------~~~~~~~~~~h 188 (420)
T 4gga_A 123 LDNSVYLWSASSGD-ILQLLQMEQPGEYISSVAWIKEGNYLAVG----TSSAEVQLWDVQ---------QQKRLRNMTSH 188 (420)
T ss_dssp ETTEEEEEETTTCC-EEEEEECCSTTCCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TTEEEEEECCC
T ss_pred eCCEEEEEECCCCC-EEEEEEecCCCCcEEEEEECCCCCEEEEE----ECCCeEEEEEcC---------CCcEEEEEeCC
Confidence 47899999987643 33334556788999999999999988885 699999999998 77888999999
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (346)
...+.+++|++ . ++++++.|+.+++||.......... ..+|...+..+.|+|++..+++++.|+.+++||..+
T Consensus 189 ~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~~~~~~----~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 189 SARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVAT----LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp SSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEE----EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred CCceEEEeeCC--C-EEEEEeCCCceeEeeecccceeeEE----ecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 99999988864 3 4777789999999998865433222 235677899999999999999999999999999998
Q ss_pred CCccce---eeccc---eeEEEeCCCCCcEEEE--ecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEe
Q 019059 200 MGKTNS---IEHAH---VRNVDYDTKKKHLLVT--AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSA 271 (346)
Q Consensus 200 ~~~~~~---~~~~~---v~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~ 271 (346)
++.... ....+ |.+++|+|.+..++++ |+.|+.|++||+++ ..++..+.. ...+.++.|+|++ ..++++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~-~~lv~~ 338 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDA-HSQVCSILWSPHY-KELISG 338 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEEC-SSCEEEEEEETTT-TEEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeecc-ccceeeeeecCCC-CeEEEE
Confidence 764321 12233 9999999998877765 45899999999997 556666664 4678899999999 666654
Q ss_pred --cCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 272 --GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 272 --~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.|+.|+|||+.+ ++++..+.+|.+.|++++|+|++. +|++++.|++|+||++.
T Consensus 339 sg~~d~~I~iwd~~~-------------------~~~v~~l~gH~~~V~~l~~spdg~-~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 339 HGFAQNQLVIWKYPT-------------------MAKVAELKGHTSRVLSLTMSPDGA-TVASAAADETLRLWRCF 394 (420)
T ss_dssp ECTTTCCEEEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-CEEEEETTTEEEEECCS
T ss_pred EecCCCEEEEEECCC-------------------CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEecCCeEEEEECC
Confidence 3799999999998 899999999999999999999997 89999999999999974
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.2e-37 Score=261.22 Aligned_cols=275 Identities=16% Similarity=0.194 Sum_probs=211.0
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeec--CCCCcE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS--SGRHDK 136 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~ 136 (346)
..+.+|.+.|++++|+|+++.|+++ +.|+.|++|++... ....+....+..|...|.+++|+| ++. ++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~----~~dg~i~iw~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l 74 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATC----SSDQHIKVFKLDKD-----TSNWELSDSWRAHDSSIVAIDWASPEYGR-II 74 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEE----ETTSEEEEEEECSS-----SCCEEEEEEEECCSSCEEEEEECCGGGCS-EE
T ss_pred ccCcccccceeEEEEcCCCCEEEEe----eCCCeEEEEECCCC-----CCcceecceeccCCCcEEEEEEcCCCCCC-EE
Confidence 4456899999999999999988875 68999999999721 112356777889999999999999 466 47
Q ss_pred EEEecCCeEEEEEcCCCCCCce----eeecccCCCceeeEEEEeCCC--CCcEEEEecCCeEEEEEccCCCccceeec--
Q 019059 137 LVSIDEENIFLWSLDCSNKNAQ----VQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIEH-- 208 (346)
Q Consensus 137 ~~~~~d~~i~vwd~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-- 208 (346)
++++.|+.|++||+.++..... ........|...+.+++|+|+ +..+++++.|+.|++||+++++....+..
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 154 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS 154 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE
T ss_pred EEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc
Confidence 7778899999999987642210 111223457779999999999 99999999999999999998886654431
Q ss_pred ----------cc---eeEEEeCCC---CCcEEEEecCCCeEEEEEcccCC-cceeeecCCCcceEEEEeCCCCC---cEE
Q 019059 209 ----------AH---VRNVDYDTK---KKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEYD---GFI 268 (346)
Q Consensus 209 ----------~~---v~~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~v~~~~~~~---~~l 268 (346)
.+ +.+++|+|+ +. .+++++.++.+.+|+..... ..+..+.+|...|++++|+|++. .+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 155 EMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp EEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred cccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 22 899999997 66 89999999999777766532 13667788999999999999973 689
Q ss_pred EEecCCCeEEEEecCCCCCCCCCcccc---------------------------cCCccccccccccccccccceeeEEE
Q 019059 269 LSAGTDSTVNLWLVSTSNHDELPSESL---------------------------VESPNQRANSLLNSYSDYEDSVYGLA 321 (346)
Q Consensus 269 ~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (346)
++++.|+.|++||++............ .........+++..+.+|...|++++
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 313 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVS 313 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEE
Confidence 999999999999998742111100000 00001122466777888999999999
Q ss_pred eCCCCCcEEEEeecCCeEEEeeec
Q 019059 322 WSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 322 ~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+|+++ +|++++.|+.|++|+++
T Consensus 314 ~s~~~~-~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 314 WNLTGT-ILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp ECSSSC-CEEEEETTSCEEEEEEC
T ss_pred EcCCCC-EEEEecCCCcEEEEecC
Confidence 999997 89999999999999986
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-36 Score=263.71 Aligned_cols=262 Identities=16% Similarity=0.203 Sum_probs=216.3
Q ss_pred CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec
Q 019059 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (346)
+.++.+++|++..... .......|...|.+++|+|++..|+++ +.|+.|++||+. ..+.+..+..
T Consensus 110 ~~d~~v~lw~~~~~~~--~~~~~~~~~~~v~~v~~s~~~~~l~~~----~~dg~i~iwd~~---------~~~~~~~~~~ 174 (401)
T 4aez_A 110 ALERNVYVWNADSGSV--SALAETDESTYVASVKWSHDGSFLSVG----LGNGLVDIYDVE---------SQTKLRTMAG 174 (401)
T ss_dssp EETTEEEEEETTTCCE--EEEEECCTTCCEEEEEECTTSSEEEEE----ETTSCEEEEETT---------TCCEEEEECC
T ss_pred ECCCeEEEeeCCCCcE--eEeeecCCCCCEEEEEECCCCCEEEEE----CCCCeEEEEECc---------CCeEEEEecC
Confidence 3578999999876532 223333488999999999999888885 589999999998 6778888999
Q ss_pred cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEcc
Q 019059 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (346)
|...|.+++|++ . .+++++.|+.|++||++........ ..+|...+.+++|+|++..+++++.|+.|++||++
T Consensus 175 ~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 175 HQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGT----LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp CSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEE----EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeE----EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 999999999953 3 5778889999999999854432222 23466799999999999999999999999999999
Q ss_pred CCCccceeeccc--eeEEEeCCCCCcEEEEec--CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEE--ec
Q 019059 199 SMGKTNSIEHAH--VRNVDYDTKKKHLLVTAA--DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS--AG 272 (346)
Q Consensus 199 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s--~~ 272 (346)
+++....+.... |.+++|+|++..++++++ .|+.|++||+++ ..++..+. +...|.+++|+|++ .+|++ |+
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~ 324 (401)
T 4aez_A 248 SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGF 324 (401)
T ss_dssp CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSS-SEEEEEECT
T ss_pred CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCC-CeEEEEeec
Confidence 988877765222 999999998887888865 799999999997 55677775 67889999999999 88888 55
Q ss_pred CCCeEEEEecCCCCCCCCCcccccCCcccccccc--ccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 273 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.|+.|++||+.. ++. ...+.+|...|.+++|+|+++ +|++++.|+.|++|++.
T Consensus 325 ~dg~i~v~~~~~-------------------~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 325 PDNNLSIWSYSS-------------------SGLTKQVDIPAHDTRVLYSALSPDGR-ILSTAASDENLKFWRVY 379 (401)
T ss_dssp TTCEEEEEEEET-------------------TEEEEEEEEECCSSCCCEEEECTTSS-EEEEECTTSEEEEEECC
T ss_pred CCCcEEEEecCC-------------------ccceeEEEecCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECC
Confidence 899999999987 333 334678999999999999997 89999999999999985
No 53
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-37 Score=263.47 Aligned_cols=255 Identities=17% Similarity=0.284 Sum_probs=206.6
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~ 136 (346)
..+.+|.+.|.+++|+|+++.|+++ +.|+.|++|++. ....+.+..+..|...|.+++|+++ +. ++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~----~~dg~i~iw~~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l 72 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATC----SSDKTIKIFEVE-------GETHKLIDTLTGHEGPVWRVDWAHPKFGT-IL 72 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEE----ETTSCEEEEEEE-------TTEEEEEEEECCCSSCEEEEEECCGGGCS-EE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEE----ECCCcEEEEecC-------CCcceeeeEecCCCCcEEEEEeCCCCCCC-EE
Confidence 4567899999999999999988875 589999999997 2345777788899999999999877 66 47
Q ss_pred EEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC--CCcEEEEecCCeEEEEEccCCCccceee-ccc---
Q 019059 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIE-HAH--- 210 (346)
Q Consensus 137 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~--- 210 (346)
++++.|+.|++||+.+++.... .....|...+.+++|+|+ +..+++++.|+.|++||++++....... ..|
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQI---AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEE---EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred EEeccCCEEEEEEcCCCceeEe---eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 7778899999999987541111 222346679999999999 8999999999999999999875433222 233
Q ss_pred eeEEEeCC-------------CCCcEEEEecCCCeEEEEEcccCCc---ceeeecCCCcceEEEEeCCC---CCcEEEEe
Q 019059 211 VRNVDYDT-------------KKKHLLVTAADESGIHLWDLRMLKA---PIQELPGHTHWTWAVCCNPE---YDGFILSA 271 (346)
Q Consensus 211 v~~~~~~~-------------~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~v~~~~~---~~~~l~s~ 271 (346)
|.+++|+| ++. ++++++.|+.|++||++.... ....+.+|...|.+++|+|+ + .+|+++
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~ 227 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASV 227 (379)
T ss_dssp EEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEE
T ss_pred eEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCC-CeEEEE
Confidence 99999999 576 899999999999999986432 34567789999999999999 7 999999
Q ss_pred cCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 272 GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 272 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.|+.|++||++...... ...+.....|...|++++|+|+++ +|++++.||.|++|+++
T Consensus 228 ~~dg~i~iwd~~~~~~~~--------------~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPW--------------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ETTSCEEEEEESSTTSCC--------------EEEESSSSCCSSCEEEEEECSSSC-CEEEEESSSSEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccc--------------eeeeeccccCCCcEEEEEEcCCCC-EEEEecCCCcEEEEeCC
Confidence 999999999998711000 123333445888899999999997 88999999999999975
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.3e-36 Score=254.80 Aligned_cols=283 Identities=13% Similarity=0.161 Sum_probs=223.5
Q ss_pred eeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEE
Q 019059 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (346)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~ 94 (346)
....+..+.+++++..++++.. .+.+.. +............+|...|.+++|+|+++.++++ + |+.|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~----~-dg~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFP----PDALIG---PGIPRHARQINTLNHGEVVCAVTISNPTRHVYTG----G-KGCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCC----TTSSSS---TTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEE----C-BSEEE
T ss_pred cCCceeEEEECCCCCEEEeecC----CCcEec---cccCCccccceeccCCCceEEEEEecCCcEEEEc----C-CCeEE
Confidence 3566778888999988887642 111211 2223333444556899999999999999888774 5 99999
Q ss_pred EEecCcccCCCCCccceeeeeee--ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeE
Q 019059 95 IWQIPELYGQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (346)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (346)
+|++.... .......+. .|...|.+++|+|+++. +++++.|+.|++||+.+++...... ...|...+.
T Consensus 76 iw~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~---~~~~~~~i~ 145 (337)
T 1gxr_A 76 VWDISHPG------NKSPVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTLSIWDLAAPTPRIKAE---LTSSAPACY 145 (337)
T ss_dssp EEETTSTT------CCSCSEEEECSCTTSBEEEEEECTTSSE-EEEEESSSEEEEEECCCC--EEEEE---EECSSSCEE
T ss_pred EEECCCCC------ceeeeecccccCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCCcceeee---cccCCCceE
Confidence 99997311 112223333 78899999999999984 6777889999999998765322222 233566899
Q ss_pred EEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec
Q 019059 173 GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (346)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (346)
+++|+|+++.+++++.|+.|++||+++++....+. .| +.+++|+|++. .+++++.|+.|++||+++ ...+..+.
T Consensus 146 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~ 222 (337)
T 1gxr_A 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLRE-GRQLQQHD 222 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCC-EEEEEecCCcEEEEECCC-CceEeeec
Confidence 99999999999999999999999999988877776 33 99999999998 899999999999999997 44555554
Q ss_pred CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcE
Q 019059 250 GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWI 329 (346)
Q Consensus 250 ~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 329 (346)
+...+.+++|+|++ .+|++++.|+.|++||++. .+ ...+..|...|.+++|+|+++ +
T Consensus 223 -~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~-------------------~~-~~~~~~~~~~v~~~~~~~~~~-~ 279 (337)
T 1gxr_A 223 -FTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNK-------------------PD-KYQLHLHESCVLSLKFAYCGK-W 279 (337)
T ss_dssp -CSSCEEEEEECTTS-SEEEEEETTSCEEEEETTS-------------------SC-EEEECCCSSCEEEEEECTTSS-E
T ss_pred -CCCceEEEEECCCC-CEEEEEcCCCcEEEEECCC-------------------CC-eEEEcCCccceeEEEECCCCC-E
Confidence 78899999999999 9999999999999999997 33 345678889999999999997 8
Q ss_pred EEEeecCCeEEEeeec
Q 019059 330 FASLSYDGRVRNHMLE 345 (346)
Q Consensus 330 l~s~~~d~~v~vw~~~ 345 (346)
|++++.|+.|++|+++
T Consensus 280 l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEEEETTSEEEEEETT
T ss_pred EEEecCCCcEEEEECC
Confidence 9999999999999975
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.7e-38 Score=270.64 Aligned_cols=307 Identities=15% Similarity=0.106 Sum_probs=217.9
Q ss_pred eeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEE
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~v 95 (346)
...|.++.+++++..+++|. .++.+.+|++.... ......+.+|.+.|.+++|+|+++.|+++ +.|+.|++
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~----~d~~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----s~d~~v~v 81 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTT----ATNQVELYEQDGNG-WKHARTFSDHDKIVTCVDWAPKSNRIVTC----SQDRNAYV 81 (377)
T ss_dssp SSCCSCCEECSSSSEEECCC----SSSCBCEEEEETTE-EEECCCBCCCSSCEEEEEECTTTCCEEEE----ETTSSEEE
T ss_pred CCcEEEEEECCCCCEEEEec----CCCEEEEEEccCCc-eEEEEEEecCCceEEEEEEeCCCCEEEEE----eCCCeEEE
Confidence 34677888889998888763 57899999998642 13446677899999999999999988885 68999999
Q ss_pred EecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEE
Q 019059 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (346)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (346)
||+.... .......+..|...|.+++|+|+++. +++++.|+.|++||+++++....... ....|...+.+++
T Consensus 82 wd~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 82 YEKRPDG------TWKQTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVSKH-LKRPLRSTILSLD 153 (377)
T ss_dssp C------------CCCCEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCCEE-ECSSCCSCEEEEE
T ss_pred EEcCCCC------ceeeeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceeeeE-eecccCCCeEEEE
Confidence 9998210 12356677789999999999999985 77778899999999987653111111 1112667999999
Q ss_pred eCCCCCcEEEEecCCeEEEEEccCC------------------Cccceeeccc---eeEEEeCCCCCcEEEEecCCCeEE
Q 019059 176 WDPHDVNAVAATCESSVQFWDLRSM------------------GKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~------------------~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
|+|+++.+++++.|+.|++||++.. ++...+ +| |.+++|+|+++ +|++++.|+.|+
T Consensus 154 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~-~l~~~~~d~~i~ 230 (377)
T 3dwl_C 154 WHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGN-ALAYAGHDSSVT 230 (377)
T ss_dssp ECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSS-CEEEEETTTEEC
T ss_pred EcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCC-EEEEEeCCCcEE
Confidence 9999999999999999999999632 233333 34 99999999998 899999999999
Q ss_pred EEEcccCCcc---eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCC---CC--ccccc----------
Q 019059 235 LWDLRMLKAP---IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDE---LP--SESLV---------- 296 (346)
Q Consensus 235 i~d~~~~~~~---~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~--~~~~~---------- 296 (346)
+||++....+ +..+..|...|.+++|+|++ .+|++++.|+.+ +|+........ .. .....
T Consensus 231 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (377)
T 3dwl_C 231 IAYPSAPEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEG 308 (377)
T ss_dssp -CEECSTTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCC
T ss_pred EEECCCCCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccc
Confidence 9999974421 77888999999999999999 999999877655 77665321000 00 00000
Q ss_pred -C-Cc--------cc--------cccccccccccccceeeEEEeCCCCCc---EEEEeecCCeEEEeee
Q 019059 297 -E-SP--------NQ--------RANSLLNSYSDYEDSVYGLAWSSREPW---IFASLSYDGRVRNHML 344 (346)
Q Consensus 297 -~-~~--------~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~---~l~s~~~d~~v~vw~~ 344 (346)
. .. .. ...........|...|+++++.+.... .|++++.||.|++||+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 309 REEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 00 00 000111222348999999998765543 5999999999999986
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-37 Score=272.80 Aligned_cols=269 Identities=13% Similarity=0.123 Sum_probs=198.2
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
....+|...|++|+|+|.+..++++ |+.||.|+|||+.. ........+.+|.+.|.+++|+|.+...+++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~las---Gs~dg~i~lWd~~~-------~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAV---GSKGGDIMLWNFGI-------KDKPTFIKGIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEE---EETTSCEEEECSSC-------CSCCEEECCCSSSCCCCEEEECSSCTTEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEE---EeCCCEEEEEECCC-------CCceeEEEccCCCCCEEEEEEeCCCCCEEEE
Confidence 3445788999999999977666655 47999999999972 1234445567899999999999865445888
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEE
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVD 215 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~ 215 (346)
++.|+.|++||+++... .... ....+...+.+++|+|++..+++++.||.|++||++. +.+..+. +| |.+++
T Consensus 183 ~s~D~~v~iwd~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~-~h~~~v~~v~ 257 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNIL--RVFA-SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLR-MHKKKVTHVA 257 (435)
T ss_dssp ECSSSCEEEEETTSCEE--EEEE-CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSB-CCSSCEEEEE
T ss_pred EeCCCEEEEeeccCCce--eEEe-ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEe-cccceEEeee
Confidence 88999999999975321 1111 1223344678899999999999999999999999975 4444454 44 99999
Q ss_pred eCCCCCcEEEEecCCCeEEEEEcccCCc--ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCC---
Q 019059 216 YDTKKKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL--- 290 (346)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--- 290 (346)
|+|+++.++++++.|+.|++||+++... .+....+|...|++++|+|++ .+|++++.|+.|+|||++.......
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i~iwd~~~~~~~~~~~~ 336 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSEIRVYSASQWDCPLGLIP 336 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS-SEEEEEESSSCEEEEESSSSSSEEEECC
T ss_pred ecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC-CeeEEEcCCCEEEEEECCCCccceEEec
Confidence 9999987899999999999999987432 223345799999999999999 9999999999999999987532100
Q ss_pred ---------Cccccc-----------CCc------------------ccccccccccc-ccccceeeEE-EeCCCCCcEE
Q 019059 291 ---------PSESLV-----------ESP------------------NQRANSLLNSY-SDYEDSVYGL-AWSSREPWIF 330 (346)
Q Consensus 291 ---------~~~~~~-----------~~~------------------~~~~~~~~~~~-~~~~~~v~~~-~~~~~~~~~l 330 (346)
...... ..+ ....++++..+ .+|...|.++ +|+|++. +|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~-~l 415 (435)
T 4e54_B 337 HPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGD-TL 415 (435)
T ss_dssp CCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSS-CE
T ss_pred ccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCC-EE
Confidence 000000 000 00123333333 3577778887 6999997 78
Q ss_pred EEeecCCeEEEeeec
Q 019059 331 ASLSYDGRVRNHMLE 345 (346)
Q Consensus 331 ~s~~~d~~v~vw~~~ 345 (346)
++++ |+.|+||+++
T Consensus 416 asg~-d~~i~iW~~~ 429 (435)
T 4e54_B 416 ASAM-GYHILIWSQQ 429 (435)
T ss_dssp EEEC-SSEEEECCCC
T ss_pred EEEc-CCcEEEEECC
Confidence 8776 8899999986
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.9e-37 Score=266.10 Aligned_cols=291 Identities=15% Similarity=0.181 Sum_probs=224.7
Q ss_pred cCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCccc
Q 019059 23 KADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102 (346)
Q Consensus 23 ~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~ 102 (346)
.+.+++..+++|. .++.+.+|++... .....+.+|.+.|.+++|+|+++.|+++ +.|+.|++||+.
T Consensus 104 ~~~~~~~~l~~~~----~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~----s~d~~i~iwd~~--- 169 (420)
T 3vl1_A 104 TAKLQMRRFILGT----TEGDIKVLDSNFN---LQREIDQAHVSEITKLKFFPSGEALISS----SQDMQLKIWSVK--- 169 (420)
T ss_dssp EECSSSCEEEEEE----TTSCEEEECTTSC---EEEEETTSSSSCEEEEEECTTSSEEEEE----ETTSEEEEEETT---
T ss_pred EEecCCCEEEEEE----CCCCEEEEeCCCc---ceeeecccccCccEEEEECCCCCEEEEE----eCCCeEEEEeCC---
Confidence 4566777787774 5788999987643 2335556899999999999999888875 689999999998
Q ss_pred CCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc------------------
Q 019059 103 GQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS------------------ 164 (346)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------------ 164 (346)
..+.+..+..|...|.+++|+|+++. +++++.|+.|++||+.+++....+.....
T Consensus 170 ------~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 170 ------DGSNPRTLIGHRATVTDIAIIDRGRN-VLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp ------TCCCCEEEECCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred ------CCcCceEEcCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 66777888999999999999999984 77778899999999987654333322110
Q ss_pred -CCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEccc
Q 019059 165 -SGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (346)
Q Consensus 165 -~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (346)
..+...+.+++|+|+++.+++++.|+.|++||+++++....+...| +.+++|+|++..++++++.||.|++||+++
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 0012356667788999999999999999999999998887776555 999999999976899999999999999998
Q ss_pred CCcceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE
Q 019059 241 LKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (346)
Q Consensus 241 ~~~~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (346)
...++..+.. |...+.++.+ +++ .+|++++.|+.|++||+......... ........+..|...|.+
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~-~~~-~~l~s~~~d~~v~iw~~~~~~~~~~~----------~~~~~~~~~~~~~~~v~~ 390 (420)
T 3vl1_A 323 PECPVGEFLINEGTPINNVYF-AAG-ALFVSSGFDTSIKLDIISDPESERPA----------IEFETPTFLVSNDDAVSQ 390 (420)
T ss_dssp TTSCSEEEEESTTSCEEEEEE-ETT-EEEEEETTTEEEEEEEECCTTCCSCE----------ECTTSCEEECCSSCCCCE
T ss_pred CcCchhhhhccCCCCceEEEe-CCC-CEEEEecCCccEEEEeccCCCCCccc----------eeccCccEEccCCcceEE
Confidence 6666777776 6677888855 567 89999999999999999862111000 001122234567888999
Q ss_pred EEeCCCCCc--EEEEeecCCeEEEeeecC
Q 019059 320 LAWSSREPW--IFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 320 ~~~~~~~~~--~l~s~~~d~~v~vw~~~~ 346 (346)
++|+|+++. .+++++.++.+.+|+++.
T Consensus 391 ~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 391 FCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 999999861 355666689999999863
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-37 Score=269.65 Aligned_cols=276 Identities=11% Similarity=0.130 Sum_probs=219.2
Q ss_pred eccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCc
Q 019059 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPE 100 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~ 100 (346)
.+.+++++..++.|. .++.+++|++..... ...+..| ..+....|+|+++.|+++ +.|+.|++||+.
T Consensus 61 ~~~~s~~g~~l~~~~----~d~~v~i~d~~~~~~---~~~~~~~-~~~~~~~~~~~~~~l~~~----~~dg~i~iwd~~- 127 (420)
T 3vl1_A 61 GNTFEKVGSHLYKAR----LDGHDFLFNTIIRDG---SKMLKRA-DYTAVDTAKLQMRRFILG----TTEGDIKVLDSN- 127 (420)
T ss_dssp TCEEEEEETTEEEEE----ETTEEEEEECCSEET---TTTSCSC-CEEEEEEECSSSCEEEEE----ETTSCEEEECTT-
T ss_pred ceeeeecCCeEEEEE----cCCcEEEEEecccce---eeEEecC-CceEEEEEecCCCEEEEE----ECCCCEEEEeCC-
Confidence 455667777777775 468999998765321 1222333 445556789999888875 689999999998
Q ss_pred ccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCC
Q 019059 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180 (346)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 180 (346)
..+....+..|...|.+++|+|+++ ++++++.|+.|++||+.+++....+ .+|...|.+++|+|++
T Consensus 128 --------~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 128 --------FNLQREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTL-----IGHRATVTDIAIIDRG 193 (420)
T ss_dssp --------SCEEEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEE-----ECCSSCEEEEEEETTT
T ss_pred --------CcceeeecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEE-----cCCCCcEEEEEEcCCC
Confidence 5677777789999999999999998 4777788999999999987655443 2466799999999999
Q ss_pred CcEEEEecCCeEEEEEccCCCccceeecc-------------------------c-eeEEEeCCCCCcEEEEecCCCeEE
Q 019059 181 VNAVAATCESSVQFWDLRSMGKTNSIEHA-------------------------H-VRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------------~-v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
+.+++++.|+.|++||+++++....+... . +.+++|+|++. ++++++.||.|+
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~ 272 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVIT 272 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEE
Confidence 99999999999999999998877766521 1 45566789997 899999999999
Q ss_pred EEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc-cccccccc-
Q 019059 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN-SLLNSYSD- 312 (346)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 312 (346)
+||+++..........|...|.+++|+|++..+|++++.||.|++||+++ + .++..+..
T Consensus 273 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~-------------------~~~~~~~~~~~ 333 (420)
T 3vl1_A 273 VHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS-------------------PECPVGEFLIN 333 (420)
T ss_dssp EEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC-------------------TTSCSEEEEES
T ss_pred EEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC-------------------CcCchhhhhcc
Confidence 99999855444444568899999999999933999999999999999997 4 34566665
Q ss_pred ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 313 YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|...|.++.|. +++ +|++++.|+.|++|++.
T Consensus 334 ~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 334 EGTPINNVYFA-AGA-LFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp TTSCEEEEEEE-TTE-EEEEETTTEEEEEEEEC
T ss_pred CCCCceEEEeC-CCC-EEEEecCCccEEEEecc
Confidence 66778888665 565 89999999999999975
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.9e-38 Score=269.23 Aligned_cols=242 Identities=12% Similarity=0.158 Sum_probs=193.2
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccc--eeeeeeeccCCceEEEEeecCCCCcEEEEe
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQL--ERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
.+.++|++++|+|+++.|++ ++.|+.|++|++. .. +.+..+..|...|.+++|+|+++. +++++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~----~~~d~~i~iw~~~---------~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s 74 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVT----TTATNQVELYEQD---------GNGWKHARTFSDHDKIVTCVDWAPKSNR-IVTCS 74 (377)
T ss_dssp ECSSCCSCCEECSSSSEEEC----CCSSSCBCEEEEE---------TTEEEECCCBCCCSSCEEEEEECTTTCC-EEEEE
T ss_pred cCCCcEEEEEECCCCCEEEE----ecCCCEEEEEEcc---------CCceEEEEEEecCCceEEEEEEeCCCCE-EEEEe
Confidence 36689999999999988877 4789999999998 44 677888899999999999999984 77778
Q ss_pred cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCc---cceeeccc---eeEE
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK---TNSIEHAH---VRNV 214 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~---v~~~ 214 (346)
.|+.|++||+.++....... ...+|...+.+++|+|+++.+++++.|+.|++||+++++. ...+...| |.++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTL--VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp TTSSEEEC------CCCCEE--ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred CCCeEEEEEcCCCCceeeee--EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 89999999998765111111 1234677999999999999999999999999999998873 55555325 9999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcccC-----------------CcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeE
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLRML-----------------KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------------~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i 277 (346)
+|+|++. +|++++.|+.|++||++.. ..++..+ .|...|.+++|+|++ .+|++++.|+.|
T Consensus 153 ~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~d~~i 229 (377)
T 3dwl_C 153 DWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-NALAYAGHDSSV 229 (377)
T ss_dssp EECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-SCEEEEETTTEE
T ss_pred EEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-CEEEEEeCCCcE
Confidence 9999998 8999999999999998521 2345556 899999999999999 999999999999
Q ss_pred EEEecCCCCCCCCCcccccCCcccccccc----ccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 278 NLWLVSTSNHDELPSESLVESPNQRANSL----LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
++||++. ++. +..+.+|...|.+++|+|+++ +|++++.|+.+ +|+.
T Consensus 230 ~iwd~~~-------------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 230 TIAYPSA-------------------PEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYSPI-LLQG 279 (377)
T ss_dssp C-CEECS-------------------TTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSSEE-EECC
T ss_pred EEEECCC-------------------CCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCcEE-EEEe
Confidence 9999998 555 788889999999999999996 88888866666 6654
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=276.52 Aligned_cols=256 Identities=12% Similarity=0.064 Sum_probs=193.8
Q ss_pred eccccceEEeeecCCC---------CceEEEEe---------------ecCCcceEEEEecCcccCCCCCccceeeeeee
Q 019059 62 FSHPNEIWDLSSCPFD---------QRIFSTVF---------------STGESYGAAIWQIPELYGQLNSPQLERIAALD 117 (346)
Q Consensus 62 ~~h~~~v~~~~~~~~~---------~~l~~~~~---------------~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 117 (346)
..+.+.|.+++|+|++ ++|+++.. +++.|++|+||++.... ........+.
T Consensus 130 ~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~-----~~~~~~~~l~ 204 (524)
T 2j04_B 130 YNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTST-----LHCVKVQTIV 204 (524)
T ss_dssp EECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTT-----CCEEEEEEEE
T ss_pred EECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCC-----CCceEEEEEE
Confidence 3468899999999986 55665442 25678999999987210 0111224466
Q ss_pred ccCCceEEEEeecCC-----CCcEEEEecCCeEEEEEcCCCCCCce----e--eecccCCCceeeEEEEeCCCCCcEEEE
Q 019059 118 AHVGKINCVLWWSSG-----RHDKLVSIDEENIFLWSLDCSNKNAQ----V--QSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 118 ~~~~~i~~~~~~~~~-----~~~~~~~~~d~~i~vwd~~~~~~~~~----~--~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (346)
.|.+.|.+++|+|++ ..++++++.|+.|++||+.++..... . ......+|...|.+++|+|+ ..|+++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasg 283 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCG 283 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEE
Confidence 778899999999972 23566678899999999986542210 0 00123456778999999985 479999
Q ss_pred ecCCeEEEEEccCCCccceeeccc---eeEE--EeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCc--ceEEEE
Q 019059 187 TCESSVQFWDLRSMGKTNSIEHAH---VRNV--DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTH--WTWAVC 259 (346)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~---v~~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~v~ 259 (346)
+.||+|++||++++........+| |.+| +|+|++..+|++++.|++|++||+++ ..++..+.+|.. .|.+++
T Consensus 284 s~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 284 FKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp ETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEE
T ss_pred eCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceE
Confidence 999999999999875443322355 9999 67888723899999999999999997 445566666653 588999
Q ss_pred eCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeE
Q 019059 260 CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV 339 (346)
Q Consensus 260 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v 339 (346)
|+|++ ..|++++.|++|++||++. +.++..+.+|...|++++|+|+++ +|++|+.|++|
T Consensus 363 fsp~~-~~l~s~~~d~tv~lwd~~~-------------------~~~~~~l~gH~~~V~sva~Sp~g~-~l~Sgs~Dgtv 421 (524)
T 2j04_B 363 YCPQI-YSYIYSDGASSLRAVPSRA-------------------AFAVHPLVSRETTITAIGVSRLHP-MVLAGSADGSL 421 (524)
T ss_dssp EETTT-TEEEEECSSSEEEEEETTC-------------------TTCCEEEEECSSCEEEEECCSSCC-BCEEEETTTEE
T ss_pred eCCCc-CeEEEeCCCCcEEEEECcc-------------------cccceeeecCCCceEEEEeCCCCC-eEEEEECCCEE
Confidence 99999 8899999999999999998 777788889999999999999998 89999999999
Q ss_pred EEeeec
Q 019059 340 RNHMLE 345 (346)
Q Consensus 340 ~vw~~~ 345 (346)
++|++.
T Consensus 422 ~lwd~~ 427 (524)
T 2j04_B 422 IITNAA 427 (524)
T ss_dssp ECCBSC
T ss_pred EEEech
Confidence 999964
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-36 Score=261.39 Aligned_cols=244 Identities=12% Similarity=0.145 Sum_probs=207.6
Q ss_pred eccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccce--eeeeeeccCCceEEEEeecCCCCcEEEE
Q 019059 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLE--RIAALDAHVGKINCVLWWSSGRHDKLVS 139 (346)
Q Consensus 62 ~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 139 (346)
..|.++|.+++|+|+++.++++ +.|+.|++|++. ..+ .+..+..|...|.+++|+|+++. ++++
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~----~~d~~v~i~~~~---------~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~ 70 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAIC----PNNHEVHIYEKS---------GNKWVQVHELKEHNGQVTGVDWAPDSNR-IVTC 70 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEE----CSSSEEEEEEEE---------TTEEEEEEEEECCSSCEEEEEEETTTTE-EEEE
T ss_pred cccCCCeEEEEECCCCCEEEEE----eCCCEEEEEeCC---------CCcEEeeeeecCCCCcccEEEEeCCCCE-EEEE
Confidence 3588999999999999888774 689999999998 344 78888899999999999999884 7777
Q ss_pred ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCc---cceeeccc---eeE
Q 019059 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK---TNSIEHAH---VRN 213 (346)
Q Consensus 140 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~---v~~ 213 (346)
+.|+.|++||+.+++...... ...|...+.+++|+|+++.+++++.|+.|++||++.++. ...+..+| |.+
T Consensus 71 ~~dg~i~vwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 71 GTDRNAYVWTLKGRTWKPTLV---ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp ETTSCEEEEEEETTEEEEEEE---CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred cCCCeEEEEECCCCeeeeeEE---eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 889999999998654222222 234666899999999999999999999999999998874 33333344 999
Q ss_pred EEeCCCCCcEEEEecCCCeEEEEEccc-----------------CCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 214 VDYDTKKKHLLVTAADESGIHLWDLRM-----------------LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 214 ~~~~~~~~~~l~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
++|+|++. ++++++.|+.|++||++. ...++..+..|...|.+++|+|++ .+|++++.|+.
T Consensus 148 ~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~ 225 (372)
T 1k8k_C 148 LDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDST 225 (372)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTE
T ss_pred EEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCE
Confidence 99999998 899999999999999641 245677888899999999999999 99999999999
Q ss_pred EEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 277 VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|++||+++ ++++..+..|...|.+++|+|++. +|+++ .|+.|++|++.
T Consensus 226 i~i~d~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 226 VCLADADK-------------------KMAVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp EEEEEGGG-------------------TTEEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEE
T ss_pred EEEEECCC-------------------CceeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEcc
Confidence 99999998 788888999999999999999986 77666 89999999985
No 62
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8e-36 Score=259.03 Aligned_cols=265 Identities=17% Similarity=0.211 Sum_probs=208.2
Q ss_pred eeeeccccceEEeeecC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee-------------eccCCceE
Q 019059 59 EGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-------------DAHVGKIN 124 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-------------~~~~~~i~ 124 (346)
..+.+|.+.|++++|+| +++.|+++ +.|+.|++|++.. ......+ ..|...|.
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~----~~dg~i~iw~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 103 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSG----GSDGVIVLYDLEN---------SSRQSYYTCKAVCSIGRDHPDVHRYSVE 103 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEE----ETTSCEEEEECCC---------CSSSSCEEECEEEEECTTCTTCCSSCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEE----cCCCeEEEEECCC---------CcccceEeccccccccccccccCCCcEE
Confidence 44567999999999999 88888875 6899999999983 2222222 25899999
Q ss_pred EEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCC---CcEEEEecCCeEEEEEccCCC
Q 019059 125 CVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD---VNAVAATCESSVQFWDLRSMG 201 (346)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~ 201 (346)
+++|+|++..++++++.|+.|++||+.+++...... +...+..+.|+|.+ ..+++++.++.|++||+++++
T Consensus 104 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp EEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE------CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred EEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc------CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 999999555568888889999999998765333322 23378888888854 489999999999999999998
Q ss_pred ccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee---------------cCCCcceEEEEeCCC
Q 019059 202 KTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL---------------PGHTHWTWAVCCNPE 263 (346)
Q Consensus 202 ~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~~v~~v~~~~~ 263 (346)
....+. .| |.+++|+|++++++++++.||.|++||++....++..+ ..|...|.+++|+|+
T Consensus 178 ~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 178 CSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp CCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred eeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 887776 34 99999999998679999999999999998755444444 578899999999999
Q ss_pred CCcEEEEecCCCeEEEEecCCCCCCCCCccccc-----CC-----------------------ccccccccccccccccc
Q 019059 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLV-----ES-----------------------PNQRANSLLNSYSDYED 315 (346)
Q Consensus 264 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~~-----------------------~~~~~~~~~~~~~~~~~ 315 (346)
+ .+|++++.|+.|++||+++............ .. .....++++..+.+|..
T Consensus 257 ~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 257 G-LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp S-SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred C-CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 9 9999999999999999987533211100000 00 00133566777888999
Q ss_pred eeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 316 SVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 316 ~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.|++++|+|+++ +|++++.||.|++|+++
T Consensus 336 ~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 336 TVDCCVFQSNFQ-ELYSGSRDCNILAWVPS 364 (408)
T ss_dssp CEEEEEEETTTT-EEEEEETTSCEEEEEEC
T ss_pred eEEEEEEcCCCC-EEEEECCCCeEEEEeCC
Confidence 999999999997 89999999999999986
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-36 Score=250.38 Aligned_cols=283 Identities=14% Similarity=0.169 Sum_probs=228.5
Q ss_pred eeeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEee
Q 019059 7 GIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS 86 (346)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~ 86 (346)
.+...+..+...+..+.+ +++..++.|+ .++.+.+|++... .....+..|...|.+++|+|+++.++++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~----~dg~v~vw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~--- 77 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVS----RDGTVRLWSKDDQ---WLGTVVYTGQGFLNSVCYDSEKELLLFG--- 77 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEE----TTSEEEEEEESSS---EEEEEEEECSSCEEEEEEETTTTEEEEE---
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEE----cCCcEEEEECCCC---EEEEEeecCCccEEEEEECCCCCEEEEe---
Confidence 444556666667777777 7777888774 6789999999653 2345667899999999999999888885
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG 166 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 166 (346)
+.|+.|++|++.. ....+.+..+..|...|.+++|. +. .+++++.|+.|++||. ...... ...
T Consensus 78 -~~dg~i~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d~--~~~~~~-----~~~ 140 (313)
T 3odt_A 78 -GKDTMINGVPLFA------TSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWKE--GSLVYN-----LQA 140 (313)
T ss_dssp -ETTSCEEEEETTC------CTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEET--TEEEEE-----EEC
T ss_pred -cCCCeEEEEEeee------cCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEcC--CcEEEe-----ccc
Confidence 6899999999873 11345667788999999999993 44 4778888999999992 221111 123
Q ss_pred CceeeEEEEeCC-CCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC
Q 019059 167 MLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (346)
Q Consensus 167 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (346)
|...+.++.|.| ++..+++++.|+.|++||. .+....+...+ +.+++|+|++. +++++.|+.|++||+++ .
T Consensus 141 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~-~ 215 (313)
T 3odt_A 141 HNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHT-G 215 (313)
T ss_dssp CSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTT-C
T ss_pred CCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCc-h
Confidence 566899999988 8899999999999999993 33444444323 99999999985 88899999999999997 5
Q ss_pred cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEe
Q 019059 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW 322 (346)
Q Consensus 243 ~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 322 (346)
.++..+..|...|++++|+|++ . |++++.|+.|++||+++ ++++..+..|...|.+++|
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~~-------------------~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 216 DVLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKEN-------------------GSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTTT-------------------CCEEEEEECSSSCEEEEEE
T ss_pred hhhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECCC-------------------CceeEEEeccCceEEEEEE
Confidence 6888899999999999999998 4 88999999999999998 7888888899999999999
Q ss_pred CCCCCcEEEEeecCCeEEEeeec
Q 019059 323 SSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 323 ~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+|+++ +++++.|+.|++|+++
T Consensus 275 ~~~~~--~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 275 MSNGD--IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CTTSC--EEEEETTSCEEEEESC
T ss_pred ccCCC--EEEEeCCCcEEEEeCC
Confidence 99996 5678999999999986
No 64
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-36 Score=252.34 Aligned_cols=251 Identities=16% Similarity=0.254 Sum_probs=204.5
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
..++.+|.+.|++|+|+|++..++++ ++.|++|+|||+.... .....+...+.+|...|.+++|+|+++. ++
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S---~s~D~~i~vWd~~~~~----~~~~~~~~~l~~h~~~V~~~~~s~dg~~-l~ 102 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILS---ASRDKTIIMWKLTRDE----TNYGIPQRALRGHSHFVSDVVISSDGQF-AL 102 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEE---EETTSCEEEEEECCSS----SCSEEEEEEECCCSSCEEEEEECTTSSE-EE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEE---EcCCCeEEEEECCCCC----cccceeeEEEeCCCCCEEEEEECCCCCE-EE
Confidence 35688999999999999986555544 3799999999997321 1234566788899999999999999984 77
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEE
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~ 214 (346)
+++.|+.|++|+........... .+...+....+++++..+++++.|+.+++||+...........+| +..+
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~ 177 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRFV-----GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV 177 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEE
T ss_pred EEcccccceEEeecccceeeeec-----CCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccce
Confidence 77889999999998654322222 234477888999999999999999999999998766544444344 8999
Q ss_pred EeCCCCCc-EEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcc
Q 019059 215 DYDTKKKH-LLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (346)
Q Consensus 215 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 293 (346)
+|++++.. ++++++.|+.|++||+++ ..++..+.+|...|++++|+|++ .+|++++.|+.|++||++.
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~iwd~~~--------- 246 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAMLWDLNE--------- 246 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTS-SEEEEEETTCEEEEEETTT---------
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCC-CEEEEEeCCCeEEEEEecc---------
Confidence 99877542 678899999999999997 56788899999999999999999 9999999999999999998
Q ss_pred cccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 294 SLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+++..+..+ ..|.++.|+|++. +++++.|+.|++||++
T Consensus 247 ----------~~~~~~~~~~-~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 247 ----------GKHLYTLDGG-DIINALCFSPNRY--WLCAATGPSIKIWDLE 285 (340)
T ss_dssp ----------TEEEEEEECS-SCEEEEEECSSSS--EEEEEETTEEEEEETT
T ss_pred ----------CceeeeecCC-ceEEeeecCCCCc--eeeccCCCEEEEEECC
Confidence 7777777655 4699999999874 5677789999999985
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=246.35 Aligned_cols=272 Identities=15% Similarity=0.186 Sum_probs=216.6
Q ss_pred CCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccC
Q 019059 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG 103 (346)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~ 103 (346)
+++++ .+++| .++.|++|++... ..+......+|...|.+++|+|++++++++ +.|+.|++|+++
T Consensus 33 WS~~~-~lAvg-----~D~tV~iWd~~tg-~~~~~~~~~~~~~~V~~v~~~~~~~~l~sg----s~Dg~v~iw~~~---- 97 (318)
T 4ggc_A 33 WSSGN-VLAVA-----LDNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVG----TSSAEVQLWDVQ---- 97 (318)
T ss_dssp ECTTS-EEEEE-----ETTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEE----ETTSEEEEEETT----
T ss_pred ECCCC-EEEEE-----eCCEEEEEECCCC-CEEEEEEecCCCCeEEEEEECCCCCEEEEE----ECCCcEEEeecC----
Confidence 34443 55555 3789999998764 333334556788999999999999988885 699999999998
Q ss_pred CCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcE
Q 019059 104 QLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA 183 (346)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 183 (346)
..+.+..+.+|...+.++.+. +. ++++++.++.+++|+........... .+|...+..+.+.++++.+
T Consensus 98 -----~~~~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 165 (318)
T 4ggc_A 98 -----QQKRLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATL----SGHSQEVCGLRWAPDGRHL 165 (318)
T ss_dssp -----TTEEEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEE----ECCSSCEEEEEECTTSSEE
T ss_pred -----CceeEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEE----cCccCceEEEEEcCCCCEE
Confidence 778889999999888876665 44 46777889999999988654332222 3466689999999999999
Q ss_pred EEEecCCeEEEEEccCCCccceee---ccc---eeEEEeCCCCCcEE--EEecCCCeEEEEEcccCCcceeeecCCCcce
Q 019059 184 VAATCESSVQFWDLRSMGKTNSIE---HAH---VRNVDYDTKKKHLL--VTAADESGIHLWDLRMLKAPIQELPGHTHWT 255 (346)
Q Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~---~~~---v~~~~~~~~~~~~l--~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 255 (346)
++++.|+.|++||+++++...... ..+ +.+++++|++..++ ++++.++.|++||.+. ..... ...+...+
T Consensus 166 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~~-~~~~~~~v 243 (318)
T 4ggc_A 166 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLS-AVDAHSQV 243 (318)
T ss_dssp EEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEEE-EEECSSCE
T ss_pred EEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc-ccccc-cccceeee
Confidence 999999999999999876432221 122 99999999887554 4567889999999986 33333 34577889
Q ss_pred EEEEeCCCCCcEEEE--ecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEe
Q 019059 256 WAVCCNPEYDGFILS--AGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASL 333 (346)
Q Consensus 256 ~~v~~~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 333 (346)
..+.|+|++ ..+++ ++.|+.|+|||+++ ++++.++.+|.+.|++++|+|+++ +|+++
T Consensus 244 ~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~-------------------~~~~~~l~gH~~~V~~l~~spdg~-~l~S~ 302 (318)
T 4ggc_A 244 CSILWSPHY-KELISGHGFAQNQLVIWKYPT-------------------MAKVAELKGHTSRVLSLTMSPDGA-TVASA 302 (318)
T ss_dssp EEEEEETTT-TEEEEEECTTTCCEEEEETTT-------------------CCEEEEECCCSSCEEEEEECTTSS-CEEEE
T ss_pred eeeeecccc-cceEEEEEcCCCEEEEEECCC-------------------CcEEEEEcCCCCCEEEEEEcCCCC-EEEEE
Confidence 999999999 65554 44799999999998 899999999999999999999997 89999
Q ss_pred ecCCeEEEeeec
Q 019059 334 SYDGRVRNHMLE 345 (346)
Q Consensus 334 ~~d~~v~vw~~~ 345 (346)
+.|++|+|||+.
T Consensus 303 s~D~~v~iWd~~ 314 (318)
T 4ggc_A 303 AADETLRLWRCF 314 (318)
T ss_dssp ETTTEEEEECCS
T ss_pred ecCCeEEEEECC
Confidence 999999999984
No 66
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.9e-36 Score=261.19 Aligned_cols=254 Identities=13% Similarity=0.192 Sum_probs=207.7
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC----C-
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS----G- 132 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~- 132 (346)
...+.+|.+.|++++|+| +.|+++ +.|+.|++|++..... ......+..+..|...|.+++|+|+ +
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~----~~dg~i~iw~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSC----SGDGYLKVWDNKLLDN---ENPKDKSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEE----ETTSEEEEEESBCCTT---CCGGGGEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEE----cCCCEEEEEECCCccc---ccCCCcceEEecCCCcEEEEEEecccccCCc
Confidence 456778999999999999 566664 6899999999983110 1112367788899999999999999 7
Q ss_pred --CCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC-----ceeeEEEEeC----CCCCc-EEEEecCCeEEEEEccC-
Q 019059 133 --RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM-----LHYLSGGAWD----PHDVN-AVAATCESSVQFWDLRS- 199 (346)
Q Consensus 133 --~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~i~d~~~- 199 (346)
. ++++++.|+.|++||+.++.............| ...+.+++|+ |++.. +++++.|+.|++||+++
T Consensus 80 ~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 80 ELC-LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccc-EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 7 477778899999999997765222222222334 4689999999 99999 99999999999999998
Q ss_pred -----CCccc-----eeec------cc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC---C---Ccc
Q 019059 200 -----MGKTN-----SIEH------AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG---H---THW 254 (346)
Q Consensus 200 -----~~~~~-----~~~~------~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~---~~~ 254 (346)
++.+. .+.. .+ +.+++|+|++ ++++++.|+.|++||+++ ..++..+.. | ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCC
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCc
Confidence 66665 5531 23 9999999998 789999999999999997 567888888 8 999
Q ss_pred eEEEEeCCCCCcEEEEecCC---CeEEEEecCCCCCCCCCcccccCCcccccccccccccc-------------ccceee
Q 019059 255 TWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-------------YEDSVY 318 (346)
Q Consensus 255 v~~v~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~ 318 (346)
|.+++|+|++ .+|++++.| +.|++||+++ ++++..+.. |...|.
T Consensus 236 i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 295 (397)
T 1sq9_A 236 IRSVKFSPQG-SLLAIAHDSNSFGCITLYETEF-------------------GERIGSLSVPTHSSQASLGEFAHSSWVM 295 (397)
T ss_dssp EEEEEECSST-TEEEEEEEETTEEEEEEEETTT-------------------CCEEEEECBC--------CCBSBSSCEE
T ss_pred cceEEECCCC-CEEEEEecCCCCceEEEEECCC-------------------CcccceeccCcccccccccccccCCcEE
Confidence 9999999999 999999999 9999999998 677777777 999999
Q ss_pred EEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 319 GLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 319 ~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++|+|+++ +|++++.|+.|++||+.
T Consensus 296 ~~~~~~~~~-~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 296 SLSFNDSGE-TLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp EEEECSSSS-EEEEEETTSEEEEEETT
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEEcC
Confidence 999999997 89999999999999985
No 67
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-37 Score=267.65 Aligned_cols=320 Identities=8% Similarity=0.082 Sum_probs=219.1
Q ss_pred eeeecc-cceeeEeeeccCCC-CcceEEEeecccCCCCeEEEEEecC---CCCeEEEeeeeccccceEEeeecCCCCceE
Q 019059 7 GIGYGL-KYQARCISDVKADT-DHTSFLTGTLSLKEENEVHLLRLSS---GGTELICEGLFSHPNEIWDLSSCPFDQRIF 81 (346)
Q Consensus 7 ~~~~~~-~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 81 (346)
.++..+ +.+...|..+.+++ ++..++.|. .++.|.+|++.. .. ........+|...|.+++|+|++..|+
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s----~dg~v~vwd~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGS----DQGVIKIWNLKEIIVGE-VYSSSLTYDCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEE----TTSEEEEEEHHHHHTTC-CCSCSEEEECSSCEEEEEECTTSSEEE
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEec----CCceEEEeECcccccCc-ccceeeeccCCCCEEEEEEeCCCCEEE
Confidence 344455 55567788888888 888888874 688999999876 22 111122336999999999999998888
Q ss_pred EEEeecCCcceEEEEecCcccCCC--CCccceeeeeee--c--cCCceEEEE--eecCCCCcEEEEecCCeEEEEEcCCC
Q 019059 82 STVFSTGESYGAAIWQIPELYGQL--NSPQLERIAALD--A--HVGKINCVL--WWSSGRHDKLVSIDEENIFLWSLDCS 153 (346)
Q Consensus 82 ~~~~~~~~d~~i~vw~~~~~~~~~--~~~~~~~~~~~~--~--~~~~i~~~~--~~~~~~~~~~~~~~d~~i~vwd~~~~ 153 (346)
++ +.|+.|++||++...... .......+..+. . +...+.++. +++++. .+++++.|+.|++||++++
T Consensus 128 s~----s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 128 VS----SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp EE----ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTC
T ss_pred EE----eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC
Confidence 75 699999999995210000 000011222221 1 445666666 446676 4777788999999999876
Q ss_pred CCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeC----CCCCcEEEE
Q 019059 154 NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYD----TKKKHLLVT 226 (346)
Q Consensus 154 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~----~~~~~~l~~ 226 (346)
+....+... .|...|.+++|+|++..+++++.|+.|++||+++++++..+...+ |.+++|+ |++. ++++
T Consensus 203 ~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s 278 (437)
T 3gre_A 203 ERLQIIENS---PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVG 278 (437)
T ss_dssp CEEEEEECC---GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEE
T ss_pred eeeEEEccC---CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc-EEEE
Confidence 644443321 155689999999999999999999999999999998888775333 9999554 5665 8999
Q ss_pred ecCCCeEEEEEcccCCcceeeecC--------------------------CCcceEEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 227 AADESGIHLWDLRMLKAPIQELPG--------------------------HTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (346)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~--------------------------~~~~v~~v~~~~~~~~~l~s~~~d~~i~iw 280 (346)
++.|+.|++||+++ ...+..+.+ |...|++++|+ ++ .+|++++.|+.|++|
T Consensus 279 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~i~~w 355 (437)
T 3gre_A 279 GSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSSIVMF 355 (437)
T ss_dssp ESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTEEEEE
T ss_pred EcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCeEEEE
Confidence 99999999999986 434444442 56678888898 66 899999999999999
Q ss_pred ecCCCCCCCCCccc----ccCC--------------ccccccccccccccccceeeEEEeCCC-CCcEEEEeecCCeEEE
Q 019059 281 LVSTSNHDELPSES----LVES--------------PNQRANSLLNSYSDYEDSVYGLAWSSR-EPWIFASLSYDGRVRN 341 (346)
Q Consensus 281 d~~~~~~~~~~~~~----~~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~d~~v~v 341 (346)
|++++......... .... ..............|...|++++|+++ +..+|++++.||.|+|
T Consensus 356 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~i 435 (437)
T 3gre_A 356 SLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGI 435 (437)
T ss_dssp ETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEE
T ss_pred ECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEE
Confidence 99874211100000 0000 000011112223348899999999998 2349999999999999
Q ss_pred ee
Q 019059 342 HM 343 (346)
Q Consensus 342 w~ 343 (346)
|+
T Consensus 436 w~ 437 (437)
T 3gre_A 436 FQ 437 (437)
T ss_dssp EC
T ss_pred eC
Confidence 95
No 68
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.5e-37 Score=265.80 Aligned_cols=274 Identities=16% Similarity=0.261 Sum_probs=213.2
Q ss_pred CCCCeEEEEEecCCCCe-EEEeeeeccccceEEeeecC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee
Q 019059 39 KEENEVHLLRLSSGGTE-LICEGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL 116 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 116 (346)
..++.|.+|++...+.. .....+.+|.+.|.+++|+| ++..|+++ +.|+.|++|++..... .....+++..+
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~----s~dg~v~vw~~~~~~~--~~~~~~~~~~~ 127 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASG----SEDCTVMVWEIPDGGL--VLPLREPVITL 127 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEE----ETTSEEEEEECCTTCC--SSCBCSCSEEE
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEE----eCCCeEEEEEccCCCC--ccccCCceEEe
Confidence 46789999998664321 12245678999999999999 66666664 6899999999983110 00011567788
Q ss_pred eccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEE
Q 019059 117 DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (346)
Q Consensus 117 ~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 196 (346)
.+|...|.+++|+|++..++++++.|+.|++||+.+++....+. ...|...+.+++|+|++..+++++.|+.|++||
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG---PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC---TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe---cCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 89999999999999986668888899999999998764322221 134667999999999999999999999999999
Q ss_pred ccCCCccceeeccc----eeEEEeCCCCCcEEEEe---cCCCeEEEEEcccCCcceeeec-CCCcceEEEEeCCCCCcEE
Q 019059 197 LRSMGKTNSIEHAH----VRNVDYDTKKKHLLVTA---ADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 197 ~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~l 268 (346)
+++++.+..+...| +.+++|+|++. ++++| +.|+.|++||++....++.... .|...+.+++|+|++ .+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l 282 (402)
T 2aq5_A 205 PRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT-NIV 282 (402)
T ss_dssp TTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT-TEE
T ss_pred CCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC-CEE
Confidence 99998887773344 79999999987 88888 7899999999998655444443 577889999999999 666
Q ss_pred E-EecCCCeEEEEecCCCCCCCCCcccccCCcccccccc-cccccc--ccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 269 L-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL-LNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 269 ~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
+ +++.|+.|++||+.. +++ +..+.. |...|.+++|+|++. +++ +.++.+++|++
T Consensus 283 ~~~g~~dg~i~i~d~~~-------------------~~~~~~~l~~~~~~~~v~~~~~sp~~~-~~~--s~~~~~~~~~l 340 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITS-------------------EAPFLHYLSMFSSKESQRGMGYMPKRG-LEV--NKCEIARFYKL 340 (402)
T ss_dssp EEEETTCSCEEEEEECS-------------------STTCEEEEEEECCSSCCSEEEECCGGG-SCG--GGTEEEEEEEE
T ss_pred EEEEcCCCeEEEEEecC-------------------CCcceEeecccccCCcccceEEecccc-cce--ecceeEEEEEc
Confidence 5 666899999999997 442 444443 457899999999986 554 45779999997
Q ss_pred c
Q 019059 345 E 345 (346)
Q Consensus 345 ~ 345 (346)
.
T Consensus 341 ~ 341 (402)
T 2aq5_A 341 H 341 (402)
T ss_dssp E
T ss_pred C
Confidence 5
No 69
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1e-35 Score=275.68 Aligned_cols=251 Identities=18% Similarity=0.257 Sum_probs=204.5
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
...+.+|.+.|++++|+|++..++++ ++.|++|++|++.... .........+.+|...|.+++|+|+++. ++
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s---~s~D~~i~~W~~~~~~----~~~~~~~~~~~~h~~~v~~v~~s~~g~~-l~ 446 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVS---ASRDKSIILWKLTKDD----KAYGVAQRRLTGHSHFVEDVVLSSDGQF-AL 446 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEE---EETTSEEEEEECCCST----TCSCEEEEEEECCSSCEEEEEECTTSSE-EE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEE---EeCCCcEEEEEccCCC----cccccccceecCCCCcEEEEEECCCCCE-EE
Confidence 35677999999999999987666655 4799999999987311 1123455678899999999999999984 77
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee--ccc---ee
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE--HAH---VR 212 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~---v~ 212 (346)
+++.|+.|++||+.++.....+ .+|...|.+++|+|+++.+++++.|++|++||+.......... .+| |.
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred EEeCCCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 7788999999999876433222 3577799999999999999999999999999987543322211 234 99
Q ss_pred EEEeCCCCC-cEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCC
Q 019059 213 NVDYDTKKK-HLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (346)
Q Consensus 213 ~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 291 (346)
+++|+|++. ..+++++.|+.|++||++. ......+.+|...|++++|+|++ .+|++++.|+.|++||+++
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~------- 592 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAE------- 592 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTT-------
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCC-------
Confidence 999999872 3799999999999999997 55788899999999999999999 9999999999999999998
Q ss_pred cccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 292 SESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.+..+..+ ..|.+++|+|++. +++++ .|+.|++||++
T Consensus 593 ------------~~~~~~~~~~-~~v~~~~~sp~~~-~l~~~-~~~~i~iwd~~ 631 (694)
T 3dm0_A 593 ------------GKKLYSLEAN-SVIHALCFSPNRY-WLCAA-TEHGIKIWDLE 631 (694)
T ss_dssp ------------TEEEECCBCS-SCEEEEEECSSSS-EEEEE-ETTEEEEEETT
T ss_pred ------------CceEEEecCC-CcEEEEEEcCCCc-EEEEE-cCCCEEEEECC
Confidence 7777776554 4699999999986 55554 57779999985
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.4e-35 Score=279.72 Aligned_cols=287 Identities=16% Similarity=0.242 Sum_probs=244.0
Q ss_pred ccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcc
Q 019059 12 LKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESY 91 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~ 91 (346)
+..+...+..+.++|++..+++|. .++.|.+|++.... ....+.+|.+.|.+++|+|+++.|+++ +.|+
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~----~~g~v~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg 77 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTL----YSGRVEIWNYETQV---EVRSIQVTETPVRAGKFIARKNWIIVG----SDDF 77 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTTE---EEEEEECCSSCEEEEEEEGGGTEEEEE----ETTS
T ss_pred eecCCCceEEEEECCCCCEEEEEe----CCCEEEEEECCCCc---eEEEEecCCCcEEEEEEeCCCCEEEEE----eCCC
Confidence 344556788888999999999885 57899999886632 345667899999999999999988885 5899
Q ss_pred eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceee
Q 019059 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 171 (346)
.|++||+. +++.+..+..|...|.+++|+|+++. +++++.|+.|++||+.++...... ..+|...+
T Consensus 78 ~i~vw~~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~----~~~~~~~v 143 (814)
T 3mkq_A 78 RIRVFNYN---------TGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQT----FEGHEHFV 143 (814)
T ss_dssp EEEEEETT---------TCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEE----EECCSSCE
T ss_pred eEEEEECC---------CCcEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEE----EcCCCCcE
Confidence 99999998 67888889999999999999999994 677788999999999865322222 23466689
Q ss_pred EEEEeCC-CCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCC--CCCcEEEEecCCCeEEEEEcccCCcce
Q 019059 172 SGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 172 ~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
.+++|+| ++..+++++.|+.|++||+++++....+...+ +.+++|+| ++. .+++++.||.|++||++. ..++
T Consensus 144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~ 221 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQT-KSCV 221 (814)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTT-TEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCC-CcEE
Confidence 9999999 78899999999999999999888777776443 99999999 887 899999999999999987 5678
Q ss_pred eeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCC
Q 019059 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (346)
Q Consensus 246 ~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (346)
..+.+|...|.+++|+|++ .+|++++.||.|++||+.+ ++.+..+..|...+.+++|+|+
T Consensus 222 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~-------------------~~~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 222 ATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSST-------------------YKVEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp EEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT-------------------CSEEEEECCSSSSEEEEEECTT
T ss_pred EEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-------------------CcEEEEeecCCCcEEEEEEccC
Confidence 8889999999999999999 8999999999999999998 7888888889899999999999
Q ss_pred CCcEEEEeecCCeEEEeeec
Q 019059 326 EPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 326 ~~~~l~s~~~d~~v~vw~~~ 345 (346)
+..++++++.|+.+.+|++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 282 GRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp CGGGEEEEEETTEEEEEECS
T ss_pred CCceEEEEEeCCCEEEEEcC
Confidence 87555566667888888864
No 71
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.7e-35 Score=249.07 Aligned_cols=273 Identities=12% Similarity=0.096 Sum_probs=226.3
Q ss_pred ceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCC-ceEEEEeecCCcce
Q 019059 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQ-RIFSTVFSTGESYG 92 (346)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~~~~~d~~ 92 (346)
.+...+.++.+++++..++++. .++.+.+|++...........+.+|...|.+++|+|+++ .++++ +.|+.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~----~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~----~~dg~ 80 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG----TVQGE 80 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEE----TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE----ETTSC
T ss_pred CCCCcEEEEEEcCCCCEEEEEc----CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE----cCCCe
Confidence 3455677788888888888874 578999999998775555667779999999999999988 77775 68999
Q ss_pred EEEEec-CcccCCCCCccceeeeeeec--cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCC---------CCCCceee
Q 019059 93 AAIWQI-PELYGQLNSPQLERIAALDA--HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDC---------SNKNAQVQ 160 (346)
Q Consensus 93 i~vw~~-~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~---------~~~~~~~~ 160 (346)
|++|++ . .. ....+.. |...|.+++|+| +. .+++++.|+.|++||+.+ .+....+
T Consensus 81 i~~wd~~~---------~~-~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 147 (342)
T 1yfq_A 81 ILKVDLIG---------SP-SFQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT- 147 (342)
T ss_dssp EEEECSSS---------SS-SEEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-
T ss_pred EEEEEecc---------CC-ceEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE-
Confidence 999999 6 22 2356777 999999999999 66 477788899999999985 3322221
Q ss_pred ecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC-CCcc-ceeeccc---eeEEEeCC-CCCcEEEEecCCCeEE
Q 019059 161 SKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKT-NSIEHAH---VRNVDYDT-KKKHLLVTAADESGIH 234 (346)
Q Consensus 161 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~-~~~~~~~---v~~~~~~~-~~~~~l~~~~~dg~i~ 234 (346)
.+...+.+++|+|++ +++++.|+.|++||+++ +... ......+ +.+++|+| ++. ++++++.||.|+
T Consensus 148 -----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~dg~i~ 219 (342)
T 1yfq_A 148 -----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE-GYACSSIDGRVA 219 (342)
T ss_dssp -----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC-EEEEEETTSEEE
T ss_pred -----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC-EEEEEecCCcEE
Confidence 155689999999877 99999999999999998 5543 2222233 99999999 998 899999999999
Q ss_pred EEEcccC-----CcceeeecCCCc---------ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcc
Q 019059 235 LWDLRML-----KAPIQELPGHTH---------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 235 i~d~~~~-----~~~~~~~~~~~~---------~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
+||++.. ..+...+..|.. .|.+++|+|++ .+|++++.||.|++||+++
T Consensus 220 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~---------------- 282 (342)
T 1yfq_A 220 VEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQT---------------- 282 (342)
T ss_dssp EEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTT----------------
T ss_pred EEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCcc----------------
Confidence 9999875 267778888765 99999999999 9999999999999999998
Q ss_pred ccccccccccccc-cceeeEEEeCCCCCcEEEEeecCCe
Q 019059 301 QRANSLLNSYSDY-EDSVYGLAWSSREPWIFASLSYDGR 338 (346)
Q Consensus 301 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~d~~ 338 (346)
++++..+.+| ...|++++ |++. +|++++.|+.
T Consensus 283 ---~~~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~ 315 (342)
T 1yfq_A 283 ---RKKIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDT 315 (342)
T ss_dssp ---TEEEEECCCCSSSEEEEEE--ECSS-EEEEEEECTH
T ss_pred ---HhHhhhhhcccCCCceEec--CCCC-eEEEEecCCc
Confidence 7888889998 99999999 8887 8999999998
No 72
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=251.94 Aligned_cols=251 Identities=12% Similarity=0.180 Sum_probs=200.8
Q ss_pred eEEEeeeeccccceEEeeecCCCCceEEEEeecCC---cceEEEEecCcccCCCCCccceeeee-eeccCCceEEEEeec
Q 019059 55 ELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE---SYGAAIWQIPELYGQLNSPQLERIAA-LDAHVGKINCVLWWS 130 (346)
Q Consensus 55 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 130 (346)
.+......+|.+.|.+++|+|++..+++++ +. |+.|++|++. ..+.... ...|...|.+++|+|
T Consensus 8 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~---s~~~~d~~v~iw~~~---------~~~~~~~~~~~~~~~v~~~~~~~ 75 (357)
T 3i2n_A 8 QIIAHIQKGFNYTVFDCKWVPCSAKFVTMG---NFARGTGVIQLYEIQ---------HGDLKLLREIEKAKPIKCGTFGA 75 (357)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEE---C--CCCEEEEEEEEC---------SSSEEEEEEEEESSCEEEEECTT
T ss_pred HHhhhhccCCCCceEEEEEcCCCceEEEec---CccCCCcEEEEEeCC---------CCcccceeeecccCcEEEEEEcC
Confidence 344455677999999999999998888763 54 8999999998 3333222 237899999999999
Q ss_pred C---CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEE------EeCCCCCcEEEEecCCeEEEEEccCCC
Q 019059 131 S---GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGG------AWDPHDVNAVAATCESSVQFWDLRSMG 201 (346)
Q Consensus 131 ~---~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~------~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (346)
+ +. ++++++.|+.|++||+.+++...... .+|...+.++ +|+|+++.+++++.|+.|++||+++++
T Consensus 76 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 76 TSLQQR-YLATGDFGGNLHIWNLEAPEMPVYSV----KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp CCTTTC-CEEEEETTSCEEEECTTSCSSCSEEE----CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred CCCCCc-eEEEecCCCeEEEEeCCCCCccEEEE----EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 9 45 47788889999999999766222222 3466688888 457899999999999999999999887
Q ss_pred -ccceeec--c----ceeEEE----eCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCC---CCCcE
Q 019059 202 -KTNSIEH--A----HVRNVD----YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP---EYDGF 267 (346)
Q Consensus 202 -~~~~~~~--~----~v~~~~----~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~---~~~~~ 267 (346)
....+.. + .+.+++ |+|++. ++++++.|+.|++||++. ... .....|...|.+++|+| ++ .+
T Consensus 151 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~-~~ 226 (357)
T 3i2n_A 151 DPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISM-NK 226 (357)
T ss_dssp SCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSC-CE
T ss_pred CcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCC-CE
Confidence 5555531 2 177887 789998 899999999999999997 333 34456889999999999 88 99
Q ss_pred EEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc-----cccceeeEEEeCCCCCcEEEEeecCCeEEEe
Q 019059 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-----DYEDSVYGLAWSSREPWIFASLSYDGRVRNH 342 (346)
Q Consensus 268 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw 342 (346)
|++++.|+.|++||++. .++...+. +|...|++++|+|+++.+|++++.|+.|++|
T Consensus 227 l~~~~~dg~i~i~d~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 227 LVATSLEGKFHVFDMRT-------------------QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp EEEEESTTEEEEEEEEE-------------------EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EEEECCCCeEEEEeCcC-------------------CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe
Confidence 99999999999999997 55555554 8999999999999986589999999999999
Q ss_pred eec
Q 019059 343 MLE 345 (346)
Q Consensus 343 ~~~ 345 (346)
+++
T Consensus 288 d~~ 290 (357)
T 3i2n_A 288 KYE 290 (357)
T ss_dssp EEE
T ss_pred ecC
Confidence 985
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-35 Score=250.32 Aligned_cols=250 Identities=15% Similarity=0.162 Sum_probs=213.0
Q ss_pred CCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCC
Q 019059 53 GTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSG 132 (346)
Q Consensus 53 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 132 (346)
+.......+.+|.+.|++++|+|+++.|+++ +.|+.|++||+. ..+.+..+..|...|.+++|+|++
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~----~~dg~i~vwd~~---------~~~~~~~~~~h~~~v~~~~~~~~~ 86 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNKEGDLLFSC----SKDSSASVWYSL---------NGERLGTLDGHTGTIWSIDVDCFT 86 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECTTSCEEEEE----ESSSCEEEEETT---------TCCEEEEECCCSSCEEEEEECTTS
T ss_pred ccccccEEEEEeeceEEEEEEcCCCCEEEEE----eCCCEEEEEeCC---------CchhhhhhhhcCCcEEEEEEcCCC
Confidence 4455667788999999999999999988885 689999999998 678888999999999999999998
Q ss_pred CCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCCCcccee-
Q 019059 133 RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKTNSI- 206 (346)
Q Consensus 133 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~- 206 (346)
+. +++++.|+.|++||+.+++...... +...+.+++|+|+++.+++++.+ +.|++||++.......+
T Consensus 87 ~~-l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 87 KY-CVTGSADYSIKLWDVSNGQCVATWK------SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp SE-EEEEETTTEEEEEETTTCCEEEEEE------CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred CE-EEEEeCCCeEEEEECCCCcEEEEee------cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 84 7777889999999998776443333 34489999999999999999988 99999999877533221
Q ss_pred ----------ec--c--ceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec
Q 019059 207 ----------EH--A--HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG 272 (346)
Q Consensus 207 ----------~~--~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~ 272 (346)
.. . .+.+++|+|++. .+++++.||.|++||++....++..+..|...|.+++|+|++ .+|++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 237 (369)
T 3zwl_B 160 KVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL-TYFITSS 237 (369)
T ss_dssp EECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS-SEEEEEE
T ss_pred ccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC-CEEEEec
Confidence 10 1 289999999998 899999999999999997556788889999999999999999 9999999
Q ss_pred CCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCC--------------e
Q 019059 273 TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDG--------------R 338 (346)
Q Consensus 273 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~--------------~ 338 (346)
.|+.|++||+++ ++.+..+. +...+.+++|+|+++ ++++++.++ .
T Consensus 238 ~d~~i~v~d~~~-------------------~~~~~~~~-~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 238 RDTNSFLVDVST-------------------LQVLKKYE-TDCPLNTAVITPLKE-FIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp TTSEEEEEETTT-------------------CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECCC-------------CE
T ss_pred CCceEEEEECCC-------------------Cceeeeec-CCCCceeEEecCCCc-eEEEeecCCCceEEEEecCCCcce
Confidence 999999999998 67776665 667799999999997 888888888 8
Q ss_pred EEEeeec
Q 019059 339 VRNHMLE 345 (346)
Q Consensus 339 v~vw~~~ 345 (346)
+++|++.
T Consensus 297 i~~~d~~ 303 (369)
T 3zwl_B 297 ARFYHKI 303 (369)
T ss_dssp EEEEETT
T ss_pred eEEEecC
Confidence 9999874
No 74
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.7e-35 Score=256.52 Aligned_cols=313 Identities=17% Similarity=0.308 Sum_probs=220.1
Q ss_pred eeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCC--------CeEEEeeeeccc------------cceEEeeecC
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGG--------TELICEGLFSHP------------NEIWDLSSCP 75 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~h~------------~~v~~~~~~~ 75 (346)
...|..+.+++++..+++|. .++.|.+|++.... .......+.+|. +.|.+++|+|
T Consensus 28 ~~~V~~v~~s~~g~~la~g~----~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGD----KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEE----TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cCcEEEEEECCCCCEEEEEc----CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 46788888999999998875 57899999998643 122346677898 8899999999
Q ss_pred CC--CceEEEEeecCCcceEEEEecCcccCC-----CCC----------------c---------cceeeee-eeccCCc
Q 019059 76 FD--QRIFSTVFSTGESYGAAIWQIPELYGQ-----LNS----------------P---------QLERIAA-LDAHVGK 122 (346)
Q Consensus 76 ~~--~~l~~~~~~~~~d~~i~vw~~~~~~~~-----~~~----------------~---------~~~~~~~-~~~~~~~ 122 (346)
++ ..++++ +.|+.|++|++...... ... + ...+... ..+|...
T Consensus 104 ~~~~~~l~s~----s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 104 QKNAAQFLLS----TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CCSSSEEEEE----ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred CCCcceEEEe----CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 97 566664 68999999998731100 000 0 0011112 3579999
Q ss_pred eEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceee---ecccCCCceeeEEEEeCCCC-CcEEEEecCCeEEEEEcc
Q 019059 123 INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ---SKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLR 198 (346)
Q Consensus 123 i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~ 198 (346)
|.+++|+|+++. ++++ .|+.|++||+.+........ .....+|...|.+++|+|++ ..+++++.|+.|++||++
T Consensus 180 v~~~~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 999999999983 5555 79999999998433222211 11234577789999999998 889999999999999999
Q ss_pred CCCc----cceeecc--------------ceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcc------
Q 019059 199 SMGK----TNSIEHA--------------HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW------ 254 (346)
Q Consensus 199 ~~~~----~~~~~~~--------------~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~------ 254 (346)
+++. ...+... .|.+++|+|++. +|++++. +.|++||++....++..+..|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeeccccccccccc
Confidence 8875 4444321 389999999998 8888888 999999999756688888888642
Q ss_pred ---------eEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccc------ccCCc-------ccccccccccccc
Q 019059 255 ---------TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSES------LVESP-------NQRANSLLNSYSD 312 (346)
Q Consensus 255 ---------v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~ 312 (346)
+..++|+|++ .+|++++.|+.|++||+.+.......... ....+ .+...........
T Consensus 336 ~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLD 414 (447)
T ss_dssp HHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCC
T ss_pred cccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccc
Confidence 2348999999 99999999999999999874321000000 00000 0000011111123
Q ss_pred ccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 313 YEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
+...|..++|+|++. +||+++.++ +++|.
T Consensus 415 ~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 415 FNKKILHTAWHPKEN-IIAVATTNN-LYIFQ 443 (447)
T ss_dssp TTSCCCEEEECSSSS-EEEEECSSC-EEEEE
T ss_pred cCCceeEEEECCCCC-EEEEEecce-eeeec
Confidence 456799999999997 888887665 77775
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.5e-35 Score=252.08 Aligned_cols=247 Identities=11% Similarity=0.085 Sum_probs=192.9
Q ss_pred EEeeeeccccceEEeeecCCC-CceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee--eccCCceEEEEeecCCC
Q 019059 57 ICEGLFSHPNEIWDLSSCPFD-QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL--DAHVGKINCVLWWSSGR 133 (346)
Q Consensus 57 ~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~ 133 (346)
....+.+|.+.|.+++|+|++ +.|+++ +.|+.|++||+. ..+....+ .+|...|.+++|+|++.
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~i~iwd~~---------~~~~~~~~~~~~h~~~v~~~~~~~~~~ 131 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVG----SKGGDIILWDYD---------VQNKTSFIQGMGPGDAITGMKFNQFNT 131 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEE----EBTSCEEEEETT---------STTCEEEECCCSTTCBEEEEEEETTEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEE----cCCCeEEEEeCC---------CcccceeeecCCcCCceeEEEeCCCCC
Confidence 446778999999999999998 556554 689999999998 33343444 46999999999999443
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--- 210 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 210 (346)
..+++++.|+.|++||+.+ .....+ .....+...+.+++|+|+++.+++++.|+.|++||++ ++.+..+. .|
T Consensus 132 ~~l~s~~~d~~i~iwd~~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~-~h~~~ 206 (383)
T 3ei3_B 132 NQLFVSSIRGATTLRDFSG-SVIQVF--AKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEK-LHKAK 206 (383)
T ss_dssp EEEEEEETTTEEEEEETTS-CEEEEE--ECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEE-CSSSC
T ss_pred CEEEEEeCCCEEEEEECCC-CceEEE--eccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEec-cCCCc
Confidence 3577778899999999984 222222 2223455689999999999999999999999999994 66666665 44
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC---cceeeecCCCcceEEEEeCC-CCCcEEEEecCCCeEEEEecCCCC
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK---APIQELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSN 286 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~v~~~~-~~~~~l~s~~~d~~i~iwd~~~~~ 286 (346)
|.+++|+|++++++++++.|+.|++||+++.. .++..+ +|...|.+++|+| ++ .+|++++.|+.|++||+++
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~-- 282 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYD-- 282 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTB--
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCC--
Confidence 99999999998789999999999999999732 234444 6999999999999 98 9999999999999999997
Q ss_pred CCCCCcccccCCccccccccccccccc-----------------cceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 287 HDELPSESLVESPNQRANSLLNSYSDY-----------------EDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++....+.+| ...+..++|+|+++ + +++.|+.|++||+.
T Consensus 283 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 283 -----------------WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDAN 338 (383)
T ss_dssp -----------------TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETT
T ss_pred -----------------CccccccccccccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecC
Confidence 3333333222 12345577777776 3 78899999999975
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3e-35 Score=277.41 Aligned_cols=245 Identities=15% Similarity=0.235 Sum_probs=211.9
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
...+.+|.+.|.+++|+|+++.++++ +.|+.|++||+. .++.+..+..|...|.+++|+|+++. ++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~----~~~g~v~iwd~~---------~~~~~~~~~~~~~~v~~~~~s~~~~~-l~ 71 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT----LYSGRVEIWNYE---------TQVEVRSIQVTETPVRAGKFIARKNW-II 71 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE----ETTSEEEEEETT---------TTEEEEEEECCSSCEEEEEEEGGGTE-EE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEE----eCCCEEEEEECC---------CCceEEEEecCCCcEEEEEEeCCCCE-EE
Confidence 35677899999999999999988886 588999999998 67888899999999999999999984 77
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCc-cceeeccc---eeE
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK-TNSIEHAH---VRN 213 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~---v~~ 213 (346)
+++.|+.|++||+.+++....+ .+|...+.+++|+|+++.+++++.|+.|++||++++.. ...+. +| +.+
T Consensus 72 ~~~~dg~i~vw~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~ 145 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNTGEKVVDF-----EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMC 145 (814)
T ss_dssp EEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEE-----ecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEE
Confidence 7788999999999877643333 24666899999999999999999999999999998744 33443 44 999
Q ss_pred EEeCC-CCCcEEEEecCCCeEEEEEcccCCcceeeecC-CCcceEEEEeCC--CCCcEEEEecCCCeEEEEecCCCCCCC
Q 019059 214 VDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDE 289 (346)
Q Consensus 214 ~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~v~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~ 289 (346)
++|+| ++. .+++++.||.|++||++... +...+.. +...+.+++|+| ++ .+|++++.|+.|++||+++
T Consensus 146 ~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~----- 217 (814)
T 3mkq_A 146 VAFNPKDPS-TFASGCLDRTVKVWSLGQST-PNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQT----- 217 (814)
T ss_dssp EEEETTEEE-EEEEEETTSEEEEEETTCSS-CSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTT-----
T ss_pred EEEEcCCCC-EEEEEeCCCeEEEEECCCCc-ceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCC-----
Confidence 99999 665 89999999999999998744 4555554 448999999999 88 8999999999999999998
Q ss_pred CCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 290 LPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 218 --------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 218 --------------KSCVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSS 258 (814)
T ss_dssp --------------TEEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETT
T ss_pred --------------CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECC
Confidence 788888889999999999999997 89999999999999975
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=261.15 Aligned_cols=257 Identities=13% Similarity=0.194 Sum_probs=197.0
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccC--CCCCccceeeeeeeccC------------CceEEEEe
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG--QLNSPQLERIAALDAHV------------GKINCVLW 128 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~~~~~~------------~~i~~~~~ 128 (346)
.|.+.|.+++|+|++++|+++ +.|+.|+||++..... .......+....+.+|. ..|.+++|
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g----~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATG----DKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEE----ETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred cccCcEEEEEECCCCCEEEEE----cCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 478999999999999988885 6899999999983211 00112234677888998 88999999
Q ss_pred ecCCC-CcEEEEecCCeEEEEEcCCCCCCce-----------------------------------eeecccCCCceeeE
Q 019059 129 WSSGR-HDKLVSIDEENIFLWSLDCSNKNAQ-----------------------------------VQSKQSSGMLHYLS 172 (346)
Q Consensus 129 ~~~~~-~~~~~~~~d~~i~vwd~~~~~~~~~-----------------------------------~~~~~~~~~~~~v~ 172 (346)
+|++. ..+++++.|+.|++||+.+...... .......+|...|.
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence 99983 2477778899999999875321100 00011246788999
Q ss_pred EEEeCCCCCcEEEEecCCeEEEEEccCC-Ccccee------eccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC
Q 019059 173 GGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSI------EHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (346)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~------~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (346)
+++|+|+++.++++ .|+.|++||+++. +....+ ..+| |.+++|+|++..+|++++.||.|++||+++..
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999999999988 8999999999943 333321 1233 99999999983399999999999999999743
Q ss_pred c---ceeeecCCCc------------ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccc
Q 019059 243 A---PIQELPGHTH------------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL 307 (346)
Q Consensus 243 ~---~~~~~~~~~~------------~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (346)
. .+..+..|.. .|.+++|+|++ .+|++++. +.|++||++. .++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~------------------~~~~~ 320 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNM------------------ENRPV 320 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTC------------------CSSCS
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCC------------------Ccccc
Confidence 2 1677888876 89999999999 99999998 9999999985 25666
Q ss_pred cccccccce---------------eeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 308 NSYSDYEDS---------------VYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 308 ~~~~~~~~~---------------v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
..+.+|... +..++|+|+++ +|++++.|+.|++||++
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 321 ETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp CCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETT
T ss_pred ceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcC
Confidence 667666532 23499999997 88999999999999985
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-35 Score=275.85 Aligned_cols=255 Identities=18% Similarity=0.287 Sum_probs=205.2
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDK 136 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~ 136 (346)
..+.+|.+.|++++|+|+++.++++ +.|+.|++|++. ....+.+..+.+|.+.|.+++|+|+ ++ .+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg----~~dg~I~vwd~~-------~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l 70 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATC----SSDKTIKIFEVE-------GETHKLIDTLTGHEGPVWRVDWAHPKFGT-IL 70 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEE----ETTTEEEEEEEE-------TTEEEEEEEECCCSSCEEEEEECCTTSCS-EE
T ss_pred eecccCcceeEEEEECCCCCeEEEE----ECCCcEEEEecC-------CCCCccceeccCCcCceEEEEecCCCCCC-EE
Confidence 3466899999999999999988885 689999999987 2345777888999999999999988 66 47
Q ss_pred EEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC--CCcEEEEecCCeEEEEEccCCCccceee-ccc---
Q 019059 137 LVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH--DVNAVAATCESSVQFWDLRSMGKTNSIE-HAH--- 210 (346)
Q Consensus 137 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~--- 210 (346)
++++.||.|++||+.++... ......+|...|.+++|+|+ +..+++++.||.|++||++++....... .+|
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~---~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWS---QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEETTSCEEEEEEETTEEE---EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EEEeCCCeEEEEECCCCccc---ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 77788999999999875311 11223456779999999999 8999999999999999999874332221 233
Q ss_pred eeEEEeCCC-------------CCcEEEEecCCCeEEEEEcccCC---cceeeecCCCcceEEEEeCCC---CCcEEEEe
Q 019059 211 VRNVDYDTK-------------KKHLLVTAADESGIHLWDLRMLK---APIQELPGHTHWTWAVCCNPE---YDGFILSA 271 (346)
Q Consensus 211 v~~~~~~~~-------------~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~v~~~~~---~~~~l~s~ 271 (346)
|.+++|+|. +. .+++|+.||.|++||++... .+...+.+|...|++++|+|+ + .+|+++
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~-~~l~s~ 225 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-SYLASV 225 (753)
T ss_dssp EEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS-EEEEEE
T ss_pred eEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCC-CEEEEE
Confidence 999999994 66 89999999999999998743 355677899999999999999 7 999999
Q ss_pred cCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 272 GTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 272 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.||.|++||++...... .........|...|++++|+|+++ +|++++.||.|++|+++
T Consensus 226 s~Dg~I~iwd~~~~~~~~--------------~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 226 SQDRTCIIWTQDNEQGPW--------------KKTLLKEEKFPDVLWRASWSLSGN-VLALSGGDNKVTLWKEN 284 (753)
T ss_dssp ESSSCEEEEEESSSSSCC--------------BCCBSSSSCCSSCCCCEEECTTTC-CEEEECSSSCEECCBCC
T ss_pred ecCCEEEEecCCCCCCcc--------------eeEEeccCCCCCceEEEEEcCCCC-EEEEEcCCCEEEEEecC
Confidence 999999999998721100 123444556888999999999997 89999999999999985
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-34 Score=239.76 Aligned_cols=251 Identities=16% Similarity=0.301 Sum_probs=196.3
Q ss_pred ccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCC--CCceEEEEeecCC
Q 019059 12 LKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGE 89 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~~~~~ 89 (346)
+..+...|.++.+++++.+++.|. .++.+++|++...... ....+.+|.++|++++|+|+ +..|+++ +.
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s----~D~~v~iw~~~~~~~~-~~~~l~gH~~~V~~v~~s~~~~g~~l~s~----s~ 75 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCS----SDKTIKIFEVEGETHK-LIDTLTGHEGPVWRVDWAHPKFGTILASC----SY 75 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEBCSSCBC-CCEEECCCSSCEEEEEECCGGGCSEEEEE----ET
T ss_pred ccCCcCceEEEEECCCCCEEEEEe----CCCEEEEEecCCCCcE-EEEEEccccCCeEEEEecCCCcCCEEEEE----cC
Confidence 444566788888999999998874 6789999999754322 23567899999999999864 6666664 79
Q ss_pred cceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
|++|++||++. .....+..+..|...|.+++|+|+ +. ++++++.|+.|++||+++........ ..+|
T Consensus 76 D~~v~iWd~~~-------~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~---~~~h 144 (297)
T 2pm7_B 76 DGKVMIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPII---IDAH 144 (297)
T ss_dssp TTEEEEEEBSS-------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEE---EECC
T ss_pred CCEEEEEEcCC-------CceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeee---eecc
Confidence 99999999972 122455667789999999999998 55 47777899999999998653222111 2346
Q ss_pred ceeeEEEEeCCC-------------CCcEEEEecCCeEEEEEccCCCc----cceeeccc---eeEEEeCCCC--CcEEE
Q 019059 168 LHYLSGGAWDPH-------------DVNAVAATCESSVQFWDLRSMGK----TNSIEHAH---VRNVDYDTKK--KHLLV 225 (346)
Q Consensus 168 ~~~v~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~---v~~~~~~~~~--~~~l~ 225 (346)
...+.+++|+|+ ++.|++++.|+.|++||+++++. ...+. +| |.+++|+|++ ..+|+
T Consensus 145 ~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~la 223 (297)
T 2pm7_B 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMA 223 (297)
T ss_dssp SSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEE
T ss_pred cCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEE
Confidence 678999999997 46899999999999999998763 33343 55 9999999985 33899
Q ss_pred EecCCCeEEEEEcccCCcc--eeee--cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 226 TAADESGIHLWDLRMLKAP--IQEL--PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 226 ~~~~dg~i~i~d~~~~~~~--~~~~--~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+++.|++|++||++....+ ...+ ..|...|.+++|+|++ .+|++++.|+.|+||+...
T Consensus 224 s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEECT
T ss_pred EEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEECC
Confidence 9999999999999863221 1223 4678899999999999 9999999999999999875
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.6e-34 Score=251.09 Aligned_cols=276 Identities=15% Similarity=0.268 Sum_probs=219.6
Q ss_pred EeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEe
Q 019059 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (346)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (346)
.+.++.. ++..+++|. .++.|.+|++.... ....+.+|.+.|.+++| ++..++++ +.|+.|++||
T Consensus 135 ~v~~~~~--d~~~l~~g~----~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~--~~~~l~sg----~~dg~i~vwd 199 (435)
T 1p22_A 135 GVYCLQY--DDQKIVSGL----RDNTIKIWDKNTLE---CKRILTGHTGSVLCLQY--DERVIITG----SSDSTVRVWD 199 (435)
T ss_dssp CEEEEEC--CSSEEEEEE----SSSCEEEEESSSCC---EEEEECCCSSCEEEEEC--CSSEEEEE----ETTSCEEEEE
T ss_pred cEEEEEE--CCCEEEEEe----CCCeEEEEeCCCCe---EEEEEcCCCCcEEEEEE--CCCEEEEE----cCCCeEEEEE
Confidence 3444444 566777764 67899999987643 34567789999999999 56666664 6899999999
Q ss_pred cCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeC
Q 019059 98 IPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (346)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (346)
+. +.+.+..+..|...|.+++|+++ .+++++.|+.|++||+.++...... ....+|...+.+++|
T Consensus 200 ~~---------~~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~--~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 200 VN---------TGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLR--RVLVGHRAAVNVVDF- 264 (435)
T ss_dssp SS---------SCCEEEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEE--EEECCCSSCEEEEEE-
T ss_pred CC---------CCcEEEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceee--eEecCCCCcEEEEEe-
Confidence 98 67788889999999999999743 4788889999999999876543211 223456778999999
Q ss_pred CCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcc
Q 019059 178 PHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW 254 (346)
Q Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (346)
+++.+++++.|+.|++||+++++.+..+. +| +.+++|+ +. .+++|+.||.|++||+++ ..++..+.+|...
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~ 338 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIEC-GACLRVLEGHEEL 338 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CCEEEEECCCSSC
T ss_pred -CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeC--CC-EEEEEeCCCeEEEEECCC-CCEEEEEeCCcCc
Confidence 67899999999999999999999888877 44 9999994 44 899999999999999997 5688899999999
Q ss_pred eEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEee
Q 019059 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (346)
Q Consensus 255 v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (346)
|.+++| ++ .+|++|+.||.|++||++........ ....++..+.+|.+.|.+++| ++. +|++++
T Consensus 339 v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~----------~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s 402 (435)
T 1p22_A 339 VRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAP----------AGTLCLRTLVEHSGRVFRLQF--DEF-QIVSSS 402 (435)
T ss_dssp EEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSC----------TTTTEEEEECCCSSCCCCEEE--CSS-CEEECC
T ss_pred EEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCcccc----------ccchheeeccCCCCCeEEEEe--CCC-EEEEEe
Confidence 999999 56 89999999999999999862111000 001267778899999999999 455 799999
Q ss_pred cCCeEEEeeec
Q 019059 335 YDGRVRNHMLE 345 (346)
Q Consensus 335 ~d~~v~vw~~~ 345 (346)
.||.|++||+.
T Consensus 403 ~Dg~i~iwd~~ 413 (435)
T 1p22_A 403 HDDTILIWDFL 413 (435)
T ss_dssp SSSEEEEEC--
T ss_pred CCCEEEEEECC
Confidence 99999999985
No 81
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.9e-35 Score=247.02 Aligned_cols=249 Identities=13% Similarity=0.097 Sum_probs=199.4
Q ss_pred eeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCC-CcEEEE
Q 019059 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGR-HDKLVS 139 (346)
Q Consensus 61 ~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~ 139 (346)
..+|.+.|.+++|+|+++.|+++ +.|+.|++|++... ........+..|...|.+++|+|+++ . ++++
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~----~~d~~v~iw~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~ 75 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLIT----SWDGSLTVYKFDIQ------AKNVDLLQSLRYKHPLLCCNFIDNTDLQ-IYVG 75 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEE----ETTSEEEEEEEETT------TTEEEEEEEEECSSCEEEEEEEESSSEE-EEEE
T ss_pred ccCCCCcEEEEEEcCCCCEEEEE----cCCCeEEEEEeCCC------CccccceeeeecCCceEEEEECCCCCcE-EEEE
Confidence 34799999999999999888885 58999999999721 01123455568999999999999987 5 7777
Q ss_pred ecCCeEEEEEc-CCCCCCceeeecccCC--CceeeEEEEeCCCCCcEEEEecCCeEEEEEccC---------CCccceee
Q 019059 140 IDEENIFLWSL-DCSNKNAQVQSKQSSG--MLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS---------MGKTNSIE 207 (346)
Q Consensus 140 ~~d~~i~vwd~-~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~ 207 (346)
+.|+.|++||+ .++.. ....+ |...|.+++|+| +..+++++.|+.|++||+++ ++++..+.
T Consensus 76 ~~dg~i~~wd~~~~~~~------~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF------QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp ETTSCEEEECSSSSSSE------EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred cCCCeEEEEEeccCCce------EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 88999999999 75532 12234 677999999999 99999999999999999998 77666665
Q ss_pred ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEccc-CCcc-eeeecCCCcceEEEEeCC-CCCcEEEEecCCCeEEEEecC
Q 019059 208 HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRM-LKAP-IQELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVS 283 (346)
Q Consensus 208 ~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~~v~~v~~~~-~~~~~l~s~~~d~~i~iwd~~ 283 (346)
... +.+++|+|++ +++++.|+.|++||++. .... ......|...+.+++|+| ++ .+|++++.||.|++|+++
T Consensus 149 ~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECC
T ss_pred eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEc
Confidence 333 9999999875 88889999999999986 4432 334456888999999999 99 999999999999999998
Q ss_pred CCCCCCCCcccccCCccccccccccccccccc---------eeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 284 TSNHDELPSESLVESPNQRANSLLNSYSDYED---------SVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
...... ..+....+..|.. .|.+++|+|+++ +|++++.||.|++||++
T Consensus 225 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 225 DQGDDY-------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-FLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp TTCCST-------------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-CEEEEETTSCEEEEETT
T ss_pred CCCccc-------------ccccceeeecccccccccccceeEEEEEEcCCCC-EEEEecCCceEEEEcCc
Confidence 710000 0145555666644 899999999997 89999999999999986
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-35 Score=257.79 Aligned_cols=281 Identities=14% Similarity=0.145 Sum_probs=198.9
Q ss_pred cCCCCeEEEeeeeccccceEEeeecC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEe
Q 019059 50 SSGGTELICEGLFSHPNEIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLW 128 (346)
Q Consensus 50 ~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 128 (346)
|.....+......+|.+.|++++|+| +++.|+++ +.|+.|++||+....... ..+....+ .|...|.+++|
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~----s~dg~v~vwd~~~~~~~~---~~~~~~~~-~h~~~v~~~~~ 119 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITG----SDQGVIKIWNLKEIIVGE---VYSSSLTY-DCSSTVTQITM 119 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEE----ETTSEEEEEEHHHHHTTC---CCSCSEEE-ECSSCEEEEEE
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEe----cCCceEEEeECcccccCc---ccceeeec-cCCCCEEEEEE
Confidence 33333444333378999999999999 88888875 699999999987211100 01223333 58999999999
Q ss_pred ecCCCCcEEEEecCCeEEEEEcC---CCCCCceeeec-----c--cCCCceeeEEEE--eCCCCCcEEEEecCCeEEEEE
Q 019059 129 WSSGRHDKLVSIDEENIFLWSLD---CSNKNAQVQSK-----Q--SSGMLHYLSGGA--WDPHDVNAVAATCESSVQFWD 196 (346)
Q Consensus 129 ~~~~~~~~~~~~~d~~i~vwd~~---~~~~~~~~~~~-----~--~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~i~d 196 (346)
+|++. .+++++.|+.|++||++ +++........ . ..++...+.++. +++++..+++++.|+.|++||
T Consensus 120 ~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 198 (437)
T 3gre_A 120 IPNFD-AFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFD 198 (437)
T ss_dssp CTTSS-EEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEE
T ss_pred eCCCC-EEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 99888 47777889999999995 33221111100 0 000233455555 667899999999999999999
Q ss_pred ccCCCccceeecc-c---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec-CCCcceEEEEeC----CCCCcE
Q 019059 197 LRSMGKTNSIEHA-H---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCN----PEYDGF 267 (346)
Q Consensus 197 ~~~~~~~~~~~~~-~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~v~~~----~~~~~~ 267 (346)
+++++.+..+... | |++++|+|++. ++++|+.||.|++||++. ..++..+. .|...|.+++|+ |++ .+
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~ 275 (437)
T 3gre_A 199 IRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNS-VI 275 (437)
T ss_dssp TTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTE-EE
T ss_pred CCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCc-cE
Confidence 9999988888742 3 99999999998 899999999999999997 66777775 788899999555 566 79
Q ss_pred EEEecCCCeEEEEecCCCCCCCCC------cccccCCcccccccccccccc--ccceeeEEEeCCCCCcEEEEeecCCeE
Q 019059 268 ILSAGTDSTVNLWLVSTSNHDELP------SESLVESPNQRANSLLNSYSD--YEDSVYGLAWSSREPWIFASLSYDGRV 339 (346)
Q Consensus 268 l~s~~~d~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~d~~v 339 (346)
|++++.|+.|++||+++....... .......+... .-....+.+ |...|++++|+ +++ +|++++.|+.|
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~i 352 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEK-GLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSSI 352 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCS-SGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccc-ccccceecccccCCceEEEEEC-Cce-EEEecCCCCeE
Confidence 999999999999999873210000 00000000000 000012333 77889999999 564 89999999999
Q ss_pred EEeeec
Q 019059 340 RNHMLE 345 (346)
Q Consensus 340 ~vw~~~ 345 (346)
++||+.
T Consensus 353 ~~wd~~ 358 (437)
T 3gre_A 353 VMFSLN 358 (437)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999985
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=251.96 Aligned_cols=243 Identities=17% Similarity=0.262 Sum_probs=198.5
Q ss_pred eeeeccccceEEeeecCCCC-ceEEEEeecCCcceEEEEec----CcccCCCCCccce------eeeeeec---------
Q 019059 59 EGLFSHPNEIWDLSSCPFDQ-RIFSTVFSTGESYGAAIWQI----PELYGQLNSPQLE------RIAALDA--------- 118 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~-~l~~~~~~~~~d~~i~vw~~----~~~~~~~~~~~~~------~~~~~~~--------- 118 (346)
.....|.+.|.+++|+|+++ .|+++ +.|+.|++|++ . ..+ ....+..
T Consensus 39 ~~~~~~~~~v~~~~~s~~~~~~l~~~----~~dg~i~iw~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNPLDESILAYG----EKNSVARLARIVETDQ---------EGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp CEEEEECSCCSEEEECSSCTTEEEEE----ETBTEEEEEEEEEC---------------CEEEEEEEEEECCCCCC----
T ss_pred eeeeeccCceEEEEECCCCCcEEEEe----cCCceEEEEEEecccC---------Ccccccccccccccccccccccccc
Confidence 33445779999999999999 66664 68999999999 5 233 2333333
Q ss_pred -cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEc
Q 019059 119 -HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDL 197 (346)
Q Consensus 119 -~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 197 (346)
|...|.+++|+|+++. +++++.|+.|++||. ++..... ...|...+.+++|+|+++.+++++.|+.|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~~~-~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNS-IVTGVENGELRLWNK-TGALLNV-----LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSE-EEEEETTSCEEEEET-TSCEEEE-----ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCceEEEEEcCCCCE-EEEEeCCCeEEEEeC-CCCeeee-----ccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 6779999999999984 777788999999993 3322221 2346679999999999999999999999999999
Q ss_pred cCCCccceee-------------------------------------------------------ccc---eeEEEeCCC
Q 019059 198 RSMGKTNSIE-------------------------------------------------------HAH---VRNVDYDTK 219 (346)
Q Consensus 198 ~~~~~~~~~~-------------------------------------------------------~~~---v~~~~~~~~ 219 (346)
++++....+. ..| +.+++|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 8665332110 123 899999999
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCc
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (346)
++ ++++++.|+.|++||++. ..++..+..|...|.+++|+|++ +|++++.|+.|++||++.
T Consensus 259 ~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~--------------- 319 (425)
T 1r5m_A 259 NK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQ--------------- 319 (425)
T ss_dssp TT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTT---------------
T ss_pred CC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCC---------------
Confidence 98 899999999999999997 55788888899999999999987 899999999999999998
Q ss_pred cccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+..|...|.+++|+|+++ +|++++.|+.|++|++.
T Consensus 320 ----~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 320 ----NTLLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp ----TEEEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECH
T ss_pred ----CcEeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECC
Confidence 788888888999999999999997 89999999999999975
No 84
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.7e-34 Score=252.48 Aligned_cols=266 Identities=17% Similarity=0.257 Sum_probs=215.4
Q ss_pred cceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCC
Q 019059 28 HTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS 107 (346)
Q Consensus 28 ~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~ 107 (346)
...++.| +.++.|.+|++.... ....+.+|.+.|.+++|+|++ .+++ ++.|+.|++||+.
T Consensus 132 ~~~l~sg----s~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~~-~l~s----~s~dg~i~vwd~~-------- 191 (464)
T 3v7d_B 132 DNYVITG----ADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAHGG-ILVS----GSTDRTVRVWDIK-------- 191 (464)
T ss_dssp TTEEEEE----ETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSTT-EEEE----EETTSCEEEEETT--------
T ss_pred CCEEEEE----cCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcCCC-EEEE----EeCCCCEEEEECC--------
Confidence 3456665 367899999886642 345677899999999999977 5555 3799999999998
Q ss_pred ccceeeeeeeccCCceEEEEeec--CCCCcEEEEecCCeEEEEEcCCCCCCceee------------------ecccCCC
Q 019059 108 PQLERIAALDAHVGKINCVLWWS--SGRHDKLVSIDEENIFLWSLDCSNKNAQVQ------------------SKQSSGM 167 (346)
Q Consensus 108 ~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~------------------~~~~~~~ 167 (346)
+.+.+..+.+|...|.+++|++ ++. .+++++.|+.|++||+.+........ .....+|
T Consensus 192 -~~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 192 -KGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp -TTEEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred -CCcEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 6788889999999999999995 445 47777889999999998765332210 1123445
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcc
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP 244 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 244 (346)
...+.++ ++++..+++++.|+.|++||+++++++..+. +| |.+++|+|+++ .+++|+.||.|++||+++ ..+
T Consensus 270 ~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~-~~~ 344 (464)
T 3v7d_B 270 MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLEN-GEL 344 (464)
T ss_dssp SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTT-TEE
T ss_pred cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CcE
Confidence 5566665 5678899999999999999999998887776 44 99999999998 899999999999999997 668
Q ss_pred eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC
Q 019059 245 IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (346)
Q Consensus 245 ~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (346)
+..+.+|...|.++.|++ .+|++++.||.|++||++. ....... .|...+..++|+|
T Consensus 345 ~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~-------------------~~~~~~~-~~~~~~~~~~~~~ 401 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAND-------------------YSRKFSY-HHTNLSAITTFYV 401 (464)
T ss_dssp EEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTT-------------------CCEEEEE-ECTTCCCEEEEEE
T ss_pred EEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCC-------------------Cceeeee-cCCCCccEEEEEe
Confidence 889999999999999983 7899999999999999997 4444433 3556678899999
Q ss_pred CCCcEEEEeecCCeEEEeeec
Q 019059 325 REPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 325 ~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++. ++++++ |+.|++||++
T Consensus 402 ~~~-~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 402 SDN-ILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp CSS-EEEEEE-TTEEEEEETT
T ss_pred CCC-EEEEec-CCeEEEEECC
Confidence 997 888888 9999999985
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5e-35 Score=250.38 Aligned_cols=258 Identities=13% Similarity=0.173 Sum_probs=199.4
Q ss_pred eeeeccccceEEeeecCC---CC-ceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec-----cCCceEEEEee
Q 019059 59 EGLFSHPNEIWDLSSCPF---DQ-RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-----HVGKINCVLWW 129 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~---~~-~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~ 129 (346)
....+|.+.|.+++|+|+ +. .++++ +.++.|++|++. ..+.+..+.. |...|.+++|+
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~----~~~~~v~vw~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~~ 78 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFAT----VGSNRVTLYECH---------SQGEIRLLQSYVDADADENFYTCAWT 78 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEE----EETTEEEEEEEC---------GGGCEEEEEEEECSCTTCCEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEE----CCCCEEEEEEcC---------CCcEEEeeeeccccCCCCcEEEEEec
Confidence 344589999999999984 33 45554 466699999998 4444444443 56789999999
Q ss_pred cCCC---CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC-CCCcEEEEecCCeEEEEEccCCCccce
Q 019059 130 SSGR---HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNS 205 (346)
Q Consensus 130 ~~~~---~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (346)
|++. .++++++.|+.|++||+.+++....+ .+|...|.+++|+| ++..+++++.|+.|++||+++++....
T Consensus 79 ~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 79 YDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY-----VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp ECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE-----ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cCCCCCCCEEEEecCCCEEEEEEchhceEeeee-----cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 9943 24777788999999999876543332 24667999999999 889999999999999999999988777
Q ss_pred ee--ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee----------------------------cCCC
Q 019059 206 IE--HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL----------------------------PGHT 252 (346)
Q Consensus 206 ~~--~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------------------------~~~~ 252 (346)
+. ..| |.+++|+|++. .+++++.|+.|++||+++ ......+ ..|.
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR 231 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS
T ss_pred ecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCc
Confidence 62 234 99999999998 899999999999999986 3233222 2389
Q ss_pred cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCC--CCcEE
Q 019059 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR--EPWIF 330 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l 330 (346)
..|.+++|+ + .+|++++.|+.|++||++......... .........+..+..|...|++++|+|+ +. +|
T Consensus 232 ~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l 302 (366)
T 3k26_A 232 NYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKI-----KPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-ML 302 (366)
T ss_dssp SCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGC-----CTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EE
T ss_pred ceEEEEEEc--C-CEEEEEecCCEEEEEeCCCcccccccc-----ccCCcchheeccccccCCcEEEEEEcCCCCCc-EE
Confidence 999999998 5 799999999999999998732211000 0011112446677788889999999999 86 99
Q ss_pred EEeecCCeEEEeeec
Q 019059 331 ASLSYDGRVRNHMLE 345 (346)
Q Consensus 331 ~s~~~d~~v~vw~~~ 345 (346)
++++.|+.|++|+++
T Consensus 303 ~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 303 ALGNQVGKLYVWDLE 317 (366)
T ss_dssp EEECTTSCEEEEECC
T ss_pred EEEecCCcEEEEECC
Confidence 999999999999986
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.2e-34 Score=259.01 Aligned_cols=285 Identities=12% Similarity=0.149 Sum_probs=216.8
Q ss_pred cceeeEeeeccCCCCcc-eEEEeecccCCCCeEEEEEecCCCCeEEEeeeecccc---ceEEeeecCC-CCceEEEEeec
Q 019059 13 KYQARCISDVKADTDHT-SFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPN---EIWDLSSCPF-DQRIFSTVFST 87 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~~~~~~~ 87 (346)
..+...+..+.+++++. .++.+. .++.+.+|++... .....+.+|.. .|.+++|+|+ ++.++++
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~----~d~~v~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---- 225 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVG----DDGSVVFYQGPPF---KFSASDRTHHKQGSFVRDVEFSPDSGEFVITV---- 225 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEE----TTTEEEEEETTTB---EEEEEECSSSCTTCCEEEEEECSTTCCEEEEE----
T ss_pred ecCCccEEEEEECCCCCcEEEEEe----CCCcEEEEeCCCc---ceeeeecccCCCCceEEEEEECCCCCCEEEEE----
Confidence 33445566677777776 566653 6789999986553 23456778998 9999999999 8878775
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeee-e---ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec-
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAAL-D---AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK- 162 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~- 162 (346)
+.|+.|++||+. ..+.+..+ . .|...|.+++|+ ++. .+++++.|+.|++||+.+++....+...
T Consensus 226 ~~dg~i~vwd~~---------~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 294 (615)
T 1pgu_A 226 GSDRKISCFDGK---------SGEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSKCVQKWTLDK 294 (615)
T ss_dssp ETTCCEEEEETT---------TCCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred eCCCeEEEEECC---------CCCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 589999999998 66777777 6 899999999999 777 4777788999999999865422211110
Q ss_pred ---------------------------------------ccCC---------------------------------Ccee
Q 019059 163 ---------------------------------------QSSG---------------------------------MLHY 170 (346)
Q Consensus 163 ---------------------------------------~~~~---------------------------------~~~~ 170 (346)
...+ |...
T Consensus 295 ~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~ 374 (615)
T 1pgu_A 295 QQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNL 374 (615)
T ss_dssp TCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSC
T ss_pred CcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCc
Confidence 0112 2333
Q ss_pred eEEEEeCCCCCcEEEEecCCeEEEEEcc----------------------------------------------------
Q 019059 171 LSGGAWDPHDVNAVAATCESSVQFWDLR---------------------------------------------------- 198 (346)
Q Consensus 171 v~~~~~~~~~~~l~~~~~d~~i~i~d~~---------------------------------------------------- 198 (346)
+.+++| +++..+++++.|+.|++||++
T Consensus 375 v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (615)
T 1pgu_A 375 IVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVS 453 (615)
T ss_dssp EEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEE
T ss_pred eEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEE
Confidence 444444 234555555555555555543
Q ss_pred ----------------------CCCcc-ceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC-C
Q 019059 199 ----------------------SMGKT-NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-H 251 (346)
Q Consensus 199 ----------------------~~~~~-~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~ 251 (346)
+++.. ..+ ..| |.+++|+|+++ +|++++.|+.|++||+++ ..++..+.+ |
T Consensus 454 ~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~g~-~l~~~~~dg~i~iw~~~~-~~~~~~~~~~h 530 (615)
T 1pgu_A 454 LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLK-TPLRAKPSYISISPSET-YIAAGDVMGKILLYDLQS-REVKTSRWAFR 530 (615)
T ss_dssp ECSSEEEEEETTTSCEEEEETTEEEEEEECS-SCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT-TEEEECCSCCC
T ss_pred EcCCEEEEeecCCCeEEEEECCCcccccccc-CCccCceEEEEECCCCC-EEEEcCCCCeEEEeeCCC-CcceeEeecCC
Confidence 32221 111 123 99999999998 899999999999999987 557777877 9
Q ss_pred CcceEEEEeCC----------CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc-ccccccccccceeeEE
Q 019059 252 THWTWAVCCNP----------EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN-SLLNSYSDYEDSVYGL 320 (346)
Q Consensus 252 ~~~v~~v~~~~----------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~ 320 (346)
...|++++|+| ++ .+|++++.|+.|++||+.. + +++..+.+|...|+++
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~-------------------~~~~~~~~~~h~~~v~~l 590 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEE-DLVATGSLDTNIFIYSVKR-------------------PMKIIKALNAHKDGVNNL 590 (615)
T ss_dssp SSCEEEEEECCCC------CCSC-CEEEEEETTSCEEEEESSC-------------------TTCCEEETTSSTTCEEEE
T ss_pred CCceeEEEEcCccccccccccCC-CEEEEEcCCCcEEEEECCC-------------------CceechhhhcCccceEEE
Confidence 99999999999 89 9999999999999999998 5 7788889999999999
Q ss_pred EeCCCCCcEEEEeecCCeEEEeeec
Q 019059 321 AWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+|+|+++ |++++.|+.|++|+++
T Consensus 591 ~~s~~~~--l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 591 LWETPST--LVSSGADACIKRWNVV 613 (615)
T ss_dssp EEEETTE--EEEEETTSCEEEEEEC
T ss_pred EEcCCCC--eEEecCCceEEEEeee
Confidence 9999985 8999999999999986
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=243.69 Aligned_cols=284 Identities=14% Similarity=0.175 Sum_probs=221.9
Q ss_pred cccceeeEeeeccCCCCc---ceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeec
Q 019059 11 GLKYQARCISDVKADTDH---TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFST 87 (346)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~ 87 (346)
.++.+...|..+.++++. ..+++|. .++.+.+|++...+.. ....+.+|.+.|.+++|+|+++.|+++
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~----~dg~i~iw~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~---- 104 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGS----WANDVRCWEVQDSGQT-IPKAQQMHTGPVLDVCWSDDGSKVFTA---- 104 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEE----TTSEEEEEEECTTSCE-EEEEEEECSSCEEEEEECTTSSEEEEE----
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEEC----CCCcEEEEEcCCCCce-eEEEeccccCCEEEEEECcCCCEEEEE----
Confidence 344456678888888884 7777764 6789999999874433 336677899999999999999988885
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEe--ecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLW--WSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
+.|+.|++||+. ..+.+. +..|...|.+++| ++++. ++++++.|+.|++||+.+++....+...
T Consensus 105 ~~dg~v~iwd~~---------~~~~~~-~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~--- 170 (368)
T 3mmy_A 105 SCDKTAKMWDLS---------SNQAIQ-IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQLP--- 170 (368)
T ss_dssp ETTSEEEEEETT---------TTEEEE-EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEECS---
T ss_pred cCCCcEEEEEcC---------CCCcee-eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEecC---
Confidence 689999999998 445544 5579999999999 78877 3777788999999999987655444332
Q ss_pred CCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec---cc-eeEEEeCCCCC---cEEEEecCCCeEEEEEc
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH---AH-VRNVDYDTKKK---HLLVTAADESGIHLWDL 238 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~-v~~~~~~~~~~---~~l~~~~~dg~i~i~d~ 238 (346)
..+.++.+. ...+++++.++.+++||++.......... .+ ..++++.++.. ..+++++.|+.|++||+
T Consensus 171 ---~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 171 ---ERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp ---SCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred ---CCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 155666665 45788888999999999987654332221 12 55555554443 13899999999999999
Q ss_pred ccCC--cceeeecCCCc------------ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 239 RMLK--APIQELPGHTH------------WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 239 ~~~~--~~~~~~~~~~~------------~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
+... ..+..+..|.. .|++++|+|++ .+|++++.||.|++||+++ +
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~-------------------~ 305 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDA-------------------R 305 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTT-------------------T
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCC-------------------C
Confidence 8742 35667777776 79999999999 9999999999999999998 8
Q ss_pred ccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 305 SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 305 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
+++..+.+|...|++++|+|+++ +|++++.|+..+.|+
T Consensus 306 ~~~~~~~~~~~~v~~~~~s~~g~-~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 306 TKLKTSEQLDQPISACCFNHNGN-IFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEEECCCCSSCEEEEEECTTSS-CEEEEECCCSTTCGG
T ss_pred cEEEEecCCCCCceEEEECCCCC-eEEEEeccccccccc
Confidence 88999999999999999999997 889998887555444
No 88
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.5e-34 Score=281.52 Aligned_cols=283 Identities=16% Similarity=0.238 Sum_probs=238.0
Q ss_pred eeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEE
Q 019059 15 QARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAA 94 (346)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~ 94 (346)
+...+..+.+++++..++.|. .++.|.+|++.... ....+.+|.+.|.+++|+|+++.++++ +.|+.|+
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~----~d~~i~vw~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~----~~d~~v~ 682 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCG----ADKTLQVFKAETGE---KLLDIKAHEDEVLCCAFSSDDSYIATC----SADKKVK 682 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEE----ETTSEEE
T ss_pred ccccEEEEEECCCCCEEEEEe----CCCeEEEEECCCCC---EEEEeccCCCCEEEEEEecCCCEEEEE----eCCCeEE
Confidence 456777888999999998874 67899999987753 335567899999999999999988885 5899999
Q ss_pred EEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCc-EEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEE
Q 019059 95 IWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHD-KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG 173 (346)
Q Consensus 95 vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 173 (346)
+||+. +++.+..+..|...|.+++|+|++... +++++.|+.|++||+.++.....+ .+|...|.+
T Consensus 683 vwd~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~-----~~h~~~v~~ 748 (1249)
T 3sfz_A 683 IWDSA---------TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM-----FGHTNSVNH 748 (1249)
T ss_dssp EEETT---------TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE-----CCCSSCEEE
T ss_pred EEECC---------CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee-----cCCCCCEEE
Confidence 99998 678888999999999999999975543 455588999999999876533222 357779999
Q ss_pred EEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc---------------ceeEEEeCCCCCcEEEEecCCCeEEEEEc
Q 019059 174 GAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---------------HVRNVDYDTKKKHLLVTAADESGIHLWDL 238 (346)
Q Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---------------~v~~~~~~~~~~~~l~~~~~dg~i~i~d~ 238 (346)
++|+|+++.+++++.|+.|++||+++++....+... .+.+++|+|++. .+++++ ++.+.+||+
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~-~~~v~~~d~ 826 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD-KIIVAA-KNKVLLFDI 826 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS-EEEEEE-TTEEEEEET
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC-EEEEEc-CCcEEEEEe
Confidence 999999999999999999999999988765544311 188999999998 666665 689999999
Q ss_pred ccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceee
Q 019059 239 RMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (346)
.+.........+|...|.+++|+|++ .++++++.|+.|++||+.+ +..+..+.+|...|+
T Consensus 827 ~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~-------------------~~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 827 HTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDS-------------------RLKVADCRGHLSWVH 886 (1249)
T ss_dssp TTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTT-------------------TEEEEEECCCSSCEE
T ss_pred cCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCC-------------------CceeeecCCCccceE
Confidence 98543333344899999999999999 9999999999999999998 788888999999999
Q ss_pred EEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 319 GLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 319 ~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++|+|+++ .|++++.|+.|++|++.
T Consensus 887 ~v~~spdg~-~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 887 GVMFSPDGS-SFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEEHH
T ss_pred EEEECCCCC-EEEEEeCCCeEEEEEcc
Confidence 999999997 89999999999999963
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-34 Score=237.44 Aligned_cols=244 Identities=17% Similarity=0.196 Sum_probs=204.3
Q ss_pred CCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCC
Q 019059 53 GTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSG 132 (346)
Q Consensus 53 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 132 (346)
........+.+|.+.|.+++| |+++.++++ +.|+.|++||+. ..+....+..|...|.+++|+|++
T Consensus 6 ~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~----~~dg~v~vw~~~---------~~~~~~~~~~~~~~v~~~~~~~~~ 71 (313)
T 3odt_A 6 TGYQLSATLKGHDQDVRDVVA-VDDSKVASV----SRDGTVRLWSKD---------DQWLGTVVYTGQGFLNSVCYDSEK 71 (313)
T ss_dssp CCCEEEEEECCCSSCEEEEEE-EETTEEEEE----ETTSEEEEEEES---------SSEEEEEEEECSSCEEEEEEETTT
T ss_pred ccHHHHHHhhCCCCCcEEEEe-cCCCEEEEE----EcCCcEEEEECC---------CCEEEEEeecCCccEEEEEECCCC
Confidence 344456778899999999999 888888875 699999999998 667778888999999999999999
Q ss_pred CCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc--
Q 019059 133 RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-- 210 (346)
Q Consensus 133 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-- 210 (346)
+ .+++++.|+.|++|++.......... ...+|...+.+++| ++..+++++.|+.|++|| .++....+. .|
T Consensus 72 ~-~l~~~~~dg~i~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~ 143 (313)
T 3odt_A 72 E-LLLFGGKDTMINGVPLFATSGEDPLY--TLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-AHNA 143 (313)
T ss_dssp T-EEEEEETTSCEEEEETTCCTTSCC-C--EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-CCSS
T ss_pred C-EEEEecCCCeEEEEEeeecCCCCccc--chhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-cCCC
Confidence 8 47777889999999998654322221 22456778999999 577899999999999999 444555554 33
Q ss_pred -eeEEEeCC-CCCcEEEEecCCCeEEEEEcccCCcceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCC
Q 019059 211 -VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNH 287 (346)
Q Consensus 211 -v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 287 (346)
+.+++|.| ++. .+++++.|+.|++||.. .....+.. |...+.+++|+|++ . +++++.|+.|++||+++
T Consensus 144 ~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i~i~d~~~--- 214 (313)
T 3odt_A 144 SVWDAKVVSFSEN-KFLTASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLIKLVDMHT--- 214 (313)
T ss_dssp CEEEEEEEETTTT-EEEEEETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEEEEEETTT---
T ss_pred ceeEEEEccCCCC-EEEEEECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeEEEEECCc---
Confidence 99999988 666 89999999999999943 35666776 89999999999999 6 99999999999999998
Q ss_pred CCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|++++|+|++. |++++.|+.|++||++
T Consensus 215 ----------------~~~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 215 ----------------GDVLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKE 254 (313)
T ss_dssp ----------------CCEEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTT
T ss_pred ----------------hhhhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECC
Confidence 788888999999999999999983 7899999999999975
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3e-34 Score=240.80 Aligned_cols=250 Identities=18% Similarity=0.313 Sum_probs=194.7
Q ss_pred cceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCC--CCceEEEEeecCCc
Q 019059 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGES 90 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~~~~~d 90 (346)
..+...|.++.+++++..++.|. .++.+++|++.... ......+.+|.+.|.+++|+|+ +..|+++ +.|
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs----~D~~v~lwd~~~~~-~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~----s~D 80 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCS----SDRSVKIFDVRNGG-QILIADLRGHEGPVWQVAWAHPMYGNILASC----SYD 80 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEE----TTTEEEEEEEETTE-EEEEEEEECCSSCEEEEEECCGGGSSCEEEE----ETT
T ss_pred ccccCeEEEeeEcCCCCEEEEEe----CCCeEEEEEecCCC-cEEEEEEcCCCccEEEEEeCCCCCCCEEEEE----ECC
Confidence 34566788888999999998874 68999999997642 2334667899999999999863 6677764 699
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCc
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 168 (346)
++|++||++. ...+....+.+|...|.+++|+|+ +. ++++++.|+.|++||+...... .......+|.
T Consensus 81 ~~v~iWd~~~-------~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~--~~~~~~~~h~ 150 (316)
T 3bg1_A 81 RKVIIWREEN-------GTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQW--EVKKINNAHT 150 (316)
T ss_dssp SCEEEECCSS-------SCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCE--EECCBTTSSS
T ss_pred CEEEEEECCC-------CcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCc--ceeeeecccc
Confidence 9999999872 122456677889999999999998 44 4777788999999999864321 1112234577
Q ss_pred eeeEEEEeCCC-----------------CCcEEEEecCCeEEEEEccCCC---ccceeeccc---eeEEEeCCCC----C
Q 019059 169 HYLSGGAWDPH-----------------DVNAVAATCESSVQFWDLRSMG---KTNSIEHAH---VRNVDYDTKK----K 221 (346)
Q Consensus 169 ~~v~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~---v~~~~~~~~~----~ 221 (346)
..+.+++|+|+ +..+++++.|+.|++||++... +...+. +| |.+++|+|++ .
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCC
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCc
Confidence 78999999997 3689999999999999997653 333443 55 9999999986 4
Q ss_pred cEEEEecCCCeEEEEEcccCC---cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 222 HLLVTAADESGIHLWDLRMLK---APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 222 ~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+|++++.|++|++||++... .....+..|...|.+++|+|++ .+|++++.|+.|+||+...
T Consensus 230 -~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 230 -TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp -EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEECT
T ss_pred -eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEECC
Confidence 89999999999999987521 1234456788999999999999 9999999999999999874
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.9e-33 Score=276.29 Aligned_cols=295 Identities=15% Similarity=0.223 Sum_probs=238.2
Q ss_pred eeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCc-eEEEEee
Q 019059 8 IGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQR-IFSTVFS 86 (346)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~~ 86 (346)
.+..+..+...+..+.+++++..+++|+ .++.+.+|++.... ....+.+|...|.+++|+|++.. ++++
T Consensus 649 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~----~d~~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s--- 718 (1249)
T 3sfz_A 649 KLLDIKAHEDEVLCCAFSSDDSYIATCS----ADKKVKIWDSATGK---LVHTYDEHSEQVNCCHFTNKSNHLLLAT--- 718 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCC---EEEEEECCSSCEEEEEECSSSSCCEEEE---
T ss_pred EEEEeccCCCCEEEEEEecCCCEEEEEe----CCCeEEEEECCCCc---eEEEEcCCCCcEEEEEEecCCCceEEEE---
Confidence 4444555566778888899998888874 57899999987643 34566789999999999996443 3333
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeee-----
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS----- 161 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~----- 161 (346)
++.|+.|++||+. ..+.+..+.+|...|.+++|+|+++. +++++.|+.|++||+.++........
T Consensus 719 g~~d~~v~vwd~~---------~~~~~~~~~~h~~~v~~~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 719 GSNDFFLKLWDLN---------QKECRNTMFGHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFL 788 (1249)
T ss_dssp EETTSCEEEEETT---------SSSEEEEECCCSSCEEEEEECSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC-
T ss_pred EeCCCeEEEEECC---------CcchhheecCCCCCEEEEEEecCCCE-EEEEECCCeEEEEeCCCCcccceeccccccc
Confidence 4789999999998 67788889999999999999999984 77778899999999876532211110
Q ss_pred ---------------------------------------------cccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEE
Q 019059 162 ---------------------------------------------KQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (346)
Q Consensus 162 ---------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 196 (346)
....+|...+.+++|+|++..+++++.|+.|++||
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd 868 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN 868 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE
T ss_pred ccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 00125667889999999999999999999999999
Q ss_pred ccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc----------------------------ce
Q 019059 197 LRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA----------------------------PI 245 (346)
Q Consensus 197 ~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----------------------------~~ 245 (346)
+.++.....+. +| |.+++|+|++. .+++++.|+.|++||++.... .+
T Consensus 869 ~~~~~~~~~~~-~h~~~v~~v~~spdg~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 946 (1249)
T 3sfz_A 869 IDSRLKVADCR-GHLSWVHGVMFSPDGS-SFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGL 946 (1249)
T ss_dssp TTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSE
T ss_pred cCCCceeeecC-CCccceEEEEECCCCC-EEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcce
Confidence 99988877776 55 99999999998 899999999999999763110 00
Q ss_pred e--------eecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccccccee
Q 019059 246 Q--------ELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSV 317 (346)
Q Consensus 246 ~--------~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 317 (346)
. ....+...+.+++|+|++ .++++|+.||.|++||+.. ++....+.+|...|
T Consensus 947 ~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~g~~~g~i~i~d~~~-------------------~~~~~~~~~h~~~v 1006 (1249)
T 3sfz_A 947 QLIAGKTGQIDYLPEAQVSCCCLSPHL-EYVAFGDEDGAIKIIELPN-------------------NRVFSSGVGHKKAV 1006 (1249)
T ss_dssp EEEEESSCCEEEECCSCEEEEEECTTS-SEEEEEETTSCCEEEETTT-------------------TSCEEECCCCSSCC
T ss_pred EEEecCcceEEEcccCcEEEEEEcCCC-CEEEEEcCCCCEEEEEcCC-------------------CceeeecccCCCce
Confidence 0 011234678999999999 9999999999999999998 78888888999999
Q ss_pred eEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 318 YGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 318 ~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++|+|+++ +|++++.|+.|++|++.
T Consensus 1007 ~~l~~s~dg~-~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 1007 RHIQFTADGK-TLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CCEEECSSSS-CEEEECSSSBEEEEETT
T ss_pred EEEEECCCCC-EEEEEcCCCEEEEEECC
Confidence 9999999997 89999999999999975
No 92
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-34 Score=267.87 Aligned_cols=306 Identities=9% Similarity=0.006 Sum_probs=206.3
Q ss_pred EeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCe-EEE-------eeeeccccceEEeeecCCCCceEEEEeecCC
Q 019059 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LIC-------EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGE 89 (346)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~-------~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~ 89 (346)
.+..+.++++...+++|. .++.|.+|++...... ... ..+.+|.+.|.+++|+|++..++++ ++.
T Consensus 100 ~V~~v~~sp~g~~l~sgs----~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~---g~~ 172 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGL----QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI---SYE 172 (902)
T ss_dssp CEEEEECCTTCSEEEEEE----TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE---ECS
T ss_pred CEEEEEECCCCCEEEEEc----CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE---EeC
Confidence 567788889999998885 5789999998764211 000 2346799999999999976444444 478
Q ss_pred cceEEEEecCcccCCCCCccceeeeeeecc------------------CCceEEEEeecCCCCcEEEEecCCeEEEEEcC
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAALDAH------------------VGKINCVLWWSSGRHDKLVSIDEENIFLWSLD 151 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~ 151 (346)
|+.| +||+. ..+++..+..| ...|.+++|+|+|.. +++++.|+.|++||+.
T Consensus 173 dg~v-lWd~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~-lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 173 YVTL-TYSLV---------ENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH-IITIHEDNSLVFWDAN 241 (902)
T ss_dssp SCEE-EEETT---------TTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE-EEEEETTCCEEEEETT
T ss_pred CCcE-EEECC---------CCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE-EEEEECCCeEEEEECC
Confidence 9999 99998 55666666544 578999999999984 7777899999999998
Q ss_pred CCCCCceeeecc---cC----------CCceeeEEEEeC----CCC-Cc-------------------------------
Q 019059 152 CSNKNAQVQSKQ---SS----------GMLHYLSGGAWD----PHD-VN------------------------------- 182 (346)
Q Consensus 152 ~~~~~~~~~~~~---~~----------~~~~~v~~~~~~----~~~-~~------------------------------- 182 (346)
+++......... +. .+...|.+++|+ |++ ..
T Consensus 242 ~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~ 321 (902)
T 2oaj_A 242 SGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSY 321 (902)
T ss_dssp TCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCH
T ss_pred CCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccch
Confidence 765322100000 00 123356666663 322 12
Q ss_pred ---------------------------------------------EEEEecCCeEEEEEccCCCccce-------ee---
Q 019059 183 ---------------------------------------------AVAATCESSVQFWDLRSMGKTNS-------IE--- 207 (346)
Q Consensus 183 ---------------------------------------------l~~~~~d~~i~i~d~~~~~~~~~-------~~--- 207 (346)
+++++.|+.|++||+.++..... +.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~ 401 (902)
T 2oaj_A 322 EGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLR 401 (902)
T ss_dssp HHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBT
T ss_pred hhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccC
Confidence 33333445566666654432111 00
Q ss_pred ------------------------------ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcce--eee----
Q 019059 208 ------------------------------HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI--QEL---- 248 (346)
Q Consensus 208 ------------------------------~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~---- 248 (346)
.+| +.+++|+|+++ ++++|+.|++|++||+.... .. ..+
T Consensus 402 ~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~-~laSgs~DgtVrlWd~~~g~-~~~~~~~~~~l 479 (902)
T 2oaj_A 402 PLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT-AFITGHSNGSVRIYDASHGD-IQDNASFEVNL 479 (902)
T ss_dssp TBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE-EEEEEETTSEEEEEESSCCT-TTTTBCEEEEH
T ss_pred CCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc-EEEEecCCCcEEEEECCCcc-ccCCceEEeec
Confidence 011 44566788887 99999999999999998632 11 111
Q ss_pred c-----CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCC-----CCCcc----c----ccC-------------
Q 019059 249 P-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD-----ELPSE----S----LVE------------- 297 (346)
Q Consensus 249 ~-----~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~----~----~~~------------- 297 (346)
. +|...|.+|+|+|++ ++||+|+.||+|+|||+...... +.... . ...
T Consensus 480 ~~~~~~~h~~~V~svafspdg-~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAET-LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAP 558 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETTT-TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCC
T ss_pred hhhcCCCCCCceeEEEecCCC-CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCC
Confidence 1 788999999999999 99999999999999999864210 00000 0 000
Q ss_pred CccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
...+...+++..+.+|.+.|++++|+|+| +||+|+.|++|++||+++
T Consensus 559 ~~~~~g~~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 559 TGVRQGFMPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp TTCSEEEEEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTT
T ss_pred CCCCCccceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCC
Confidence 00001124567788899999999999998 799999999999999863
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-33 Score=244.39 Aligned_cols=248 Identities=12% Similarity=0.162 Sum_probs=193.6
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeec-CCCCcEEEEecCCeE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS-SGRHDKLVSIDEENI 145 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~d~~i 145 (346)
....++++|+...++++ ++.||.|+||++..... ....+..+.+|.+.|.+++|+| ++. ++++++.|+.|
T Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~g~i~v~~~~~~~~-----~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v 106 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICE---ASGGGAFLVLPLGKTGR-----VDKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTV 106 (402)
T ss_dssp SSCSEEECSSEEEEEBC---CSSSCCEEEEETTCCEE-----CCTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEE
T ss_pred CCCcEEECCCeEEEEEE---EcCCCEEEEEECccCCC-----CCCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeE
Confidence 44567888877666554 57899999999963100 1134456778999999999999 665 57777889999
Q ss_pred EEEEcCCCCCCcee--eecccCCCceeeEEEEeCCCC-CcEEEEecCCeEEEEEccCCCccceee-ccc---eeEEEeCC
Q 019059 146 FLWSLDCSNKNAQV--QSKQSSGMLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE-HAH---VRNVDYDT 218 (346)
Q Consensus 146 ~vwd~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~---v~~~~~~~ 218 (346)
++||+.++...... ......+|...|.+++|+|++ ..+++++.|+.|++||+++++....+. ..| |.+++|+|
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC
Confidence 99999876421110 011123577799999999998 578899999999999999998888773 244 99999999
Q ss_pred CCCcEEEEecCCCeEEEEEcccCCcceeee-cCCCcc-eEEEEeCCCCCcEEEEe---cCCCeEEEEecCCCCCCCCCcc
Q 019059 219 KKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHW-TWAVCCNPEYDGFILSA---GTDSTVNLWLVSTSNHDELPSE 293 (346)
Q Consensus 219 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-v~~v~~~~~~~~~l~s~---~~d~~i~iwd~~~~~~~~~~~~ 293 (346)
++. +|++++.|+.|++||+++ ...+..+ ..|... +.++.|+|++ .+|++| +.|+.|++||++.
T Consensus 187 ~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~--------- 254 (402)
T 2aq5_A 187 DGA-LICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKH--------- 254 (402)
T ss_dssp TSS-CEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTB---------
T ss_pred CCC-EEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCcc---------
Confidence 998 899999999999999997 5567777 678766 8999999999 999999 7999999999987
Q ss_pred cccCCcccccccc-cccc-ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 294 SLVESPNQRANSL-LNSY-SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+. +... ..|...+.+++|+|+++.++++++.|+.|++|+++
T Consensus 255 ----------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 255 ----------LEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp ----------CSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred ----------ccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 332 2222 24666799999999998444566689999999986
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-33 Score=255.67 Aligned_cols=282 Identities=15% Similarity=0.172 Sum_probs=216.4
Q ss_pred cceeeE-eeeccCCC--CcceEEEeecccCCCCeEEEEEecCCC-----CeEEEeeeeccccceEEeeecCCCCceEEEE
Q 019059 13 KYQARC-ISDVKADT--DHTSFLTGTLSLKEENEVHLLRLSSGG-----TELICEGLFSHPNEIWDLSSCPFDQRIFSTV 84 (346)
Q Consensus 13 ~~~~~~-~~~~~~~~--~~~~~~~g~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 84 (346)
..+... +..+.+++ ++..++.|. .++.+.+|++.... .......+..|...|.+++|+|+++.++++.
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~----~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 135 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGD----ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 135 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEE----TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ecCCCceEEEEEECcCCCCCEEEEec----CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEec
Confidence 334455 78888888 888888875 47899999996431 1233456678999999999999999998874
Q ss_pred eecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc
Q 019059 85 FSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 85 ~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
......+.|.+||.. +.+..+..|...|.+++|+|+++.++++++.|+.|++||+.+.+.... .
T Consensus 136 ~~~~~~~~v~~~d~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~-----~ 199 (615)
T 1pgu_A 136 EGRDNFGVFISWDSG-----------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS-----D 199 (615)
T ss_dssp CCSSCSEEEEETTTC-----------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEE-----E
T ss_pred cCCCCccEEEEEECC-----------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeee-----e
Confidence 111112688888843 567788899999999999999987688889999999999886543222 2
Q ss_pred CCCce---eeEEEEeCCC-CCcEEEEecCCeEEEEEccCCCccceeec---cc---eeEEEeCCCCCcEEEEecCCCeEE
Q 019059 165 SGMLH---YLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEH---AH---VRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 165 ~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~---v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
.+|.. .+.+++|+|+ ++.+++++.|+.|++||+++++.+..+.. .| |.+++|+ ++. .+++++.|+.|+
T Consensus 200 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~ 277 (615)
T 1pgu_A 200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQ-KFATVGADATIR 277 (615)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSS-EEEEEETTSEEE
T ss_pred cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCC-EEEEEcCCCcEE
Confidence 34666 8999999999 99999999999999999999998888733 44 9999999 887 899999999999
Q ss_pred EEEcccCCcceeeecCC----CcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc
Q 019059 235 LWDLRMLKAPIQELPGH----THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY 310 (346)
Q Consensus 235 i~d~~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (346)
+||+++ .+.+..+..+ ...+.++.|. ++ .++++++.|+.|++||++. ++++..+
T Consensus 278 ~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~-------------------~~~~~~~ 335 (615)
T 1pgu_A 278 VWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGH-------------------DEVLKTI 335 (615)
T ss_dssp EEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTE-------------------EEEEEEE
T ss_pred EEECCC-CcEEEEEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCC-------------------CcEEEEE
Confidence 999997 5567777765 3678888886 77 8999999999999999987 5555555
Q ss_pred ccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 311 SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 311 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
.+|...|++++| |+ +++++.|+.|++|+
T Consensus 336 ~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 336 SGHNKGITALTV-NP----LISGSYDGRIMEWS 363 (615)
T ss_dssp CCCSSCEEEEET-TT----TEEEETTSCEEETT
T ss_pred eCCCCCEEEEEe-cC----cEEECCCCeEEEEE
Confidence 555555555555 43 34444444444444
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.4e-33 Score=246.91 Aligned_cols=240 Identities=16% Similarity=0.221 Sum_probs=200.6
Q ss_pred EEeeeeccccce-EEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCc
Q 019059 57 ICEGLFSHPNEI-WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHD 135 (346)
Q Consensus 57 ~~~~~~~h~~~v-~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 135 (346)
....+.+|...| .++.+ +++.++++ +.|+.|++||+. +.+.+..+.+|.+.|.+++|++++ .
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sg----s~dg~i~vwd~~---------~~~~~~~~~~h~~~V~~l~~~~~~--~ 175 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITG----ADDKMIRVYDSI---------NKKFLLQLSGHDGGVWALKYAHGG--I 175 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEE----ETTSCEEEEETT---------TTEEEEEECCCSSCEEEEEECSTT--E
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEE----cCCCcEEEEECC---------CCcEEEEEeCCCcCEEEEEEcCCC--E
Confidence 345677898875 66666 45666664 699999999998 678889999999999999999988 4
Q ss_pred EEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeC--CCCCcEEEEecCCeEEEEEccCCCccce--------
Q 019059 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD--PHDVNAVAATCESSVQFWDLRSMGKTNS-------- 205 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~-------- 205 (346)
+++++.|+.|++||+++++.... ..+|...|.+++|+ +++..+++++.|+.|++||++++.....
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~ 250 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHV-----FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYP 250 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE-----ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSS
T ss_pred EEEEeCCCCEEEEECCCCcEEEE-----ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcc
Confidence 88889999999999987653222 23567799999998 5778899999999999999998764321
Q ss_pred --------------eeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEE
Q 019059 206 --------------IEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 206 --------------~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l 268 (346)
...+| +.++ ++++. .+++++.|+.|++||+++ ..++..+.+|...|.+++|+|++ .+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l 325 (464)
T 3v7d_B 251 LVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHER-KRC 325 (464)
T ss_dssp EEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTT-TEE
T ss_pred eEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCC-CEE
Confidence 12244 5555 56676 899999999999999997 66788899999999999999999 999
Q ss_pred EEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 269 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++.|+.|++||+++ ++++..+.+|...|.+++|++ . +|++++.|+.|++||++
T Consensus 326 ~sg~~dg~i~vwd~~~-------------------~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 326 ISASMDTTIRIWDLEN-------------------GELMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDAN 380 (464)
T ss_dssp EEEETTSCEEEEETTT-------------------TEEEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETT
T ss_pred EEEeCCCcEEEEECCC-------------------CcEEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECC
Confidence 9999999999999998 889999999999999999984 3 89999999999999985
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-33 Score=244.32 Aligned_cols=199 Identities=17% Similarity=0.188 Sum_probs=161.2
Q ss_pred ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcC--CCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEE
Q 019059 118 AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLD--CSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFW 195 (346)
Q Consensus 118 ~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 195 (346)
.|...|.+++|+|+++.++++++.|+.|++||+. ++.....+... .+...+.+++|+|+++.|++++.++.+++|
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF---CFSKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE---ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc---cCCCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 3455799999999999644667789999999998 55544333321 234589999999999999999999999999
Q ss_pred EccCCCccc----eeeccc---eeEEEeCCC---CCcEEEEecCCCeEEEEEcccCCcceee-ecCCCcceEEEEeCCCC
Q 019059 196 DLRSMGKTN----SIEHAH---VRNVDYDTK---KKHLLVTAADESGIHLWDLRMLKAPIQE-LPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 196 d~~~~~~~~----~~~~~~---v~~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~v~~~~~~ 264 (346)
++.+++... .+. +| |.+++|+|+ +. +|++++.|+.|++||+++ ...+.. +.+|...|.+++|+ ++
T Consensus 177 ~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 177 DINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp ETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-ST
T ss_pred ecCCcccccccceeee-cccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CC
Confidence 999877543 333 34 999999999 76 899999999999999987 445655 56899999999999 88
Q ss_pred CcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc-------------------------cccceeeE
Q 019059 265 DGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-------------------------DYEDSVYG 319 (346)
Q Consensus 265 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~v~~ 319 (346)
.+|++++.|+.|++||+++ ++++..+. .....|.+
T Consensus 253 -~~l~s~~~d~~v~vwd~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 253 -YLLLSAGGDDKIFAWDWKT-------------------GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp -TEEEEEESSSEEEEEETTT-------------------CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred -CEEEEEeCCCeEEEEECCC-------------------CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 9999999999999999998 44333332 22346899
Q ss_pred EEeCCCCCcEEEEee-cCCeEEEeee
Q 019059 320 LAWSSREPWIFASLS-YDGRVRNHML 344 (346)
Q Consensus 320 ~~~~~~~~~~l~s~~-~d~~v~vw~~ 344 (346)
++|+|+++ +|++++ .|+.|++|++
T Consensus 313 i~~~~~~~-~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 313 IIKSKNLP-FVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEECSSSS-EEEEEETTCSEEEEEEE
T ss_pred EEEeCCCC-EEEEEECCCCeEEEEEe
Confidence 99999997 677777 8999999998
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=239.03 Aligned_cols=248 Identities=8% Similarity=0.061 Sum_probs=190.6
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee--ccCCceEEEEeecCCCCcEEEEe
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
+|.+.|.+++|+|+++.|+++ ++.|+.|++|++.. ...+.+..+. .|...|.+++|+|+++. +++++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~---~~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~ 168 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIAC---ADSDKSLLVFDVDK-------TSKNVLKLRKRFCFSKRPNAISIAEDDTT-VIIAD 168 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEE---EGGGTEEEEEEECS-------SSSSCEEEEEEEECSSCEEEEEECTTSSE-EEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEE---ECCCCeEEEEECcC-------CCCceeeeeecccCCCCceEEEEcCCCCE-EEEEe
Confidence 345579999999999997555 47899999999871 1234455554 56789999999999984 67777
Q ss_pred cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC---CCcEEEEecCCeEEEEEccCCCccceeeccc---eeEE
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH---DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNV 214 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~ 214 (346)
.++.|++|++.+...... ......+|...|.+++|+|+ ++++++++.|+.|++||+++++.+..+..+| |.++
T Consensus 169 ~~g~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp TTSEEEEEETTSCCCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEE
T ss_pred CCCcEEEEecCCcccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEE
Confidence 899999999987654320 01122346668999999999 8899999999999999999998877755455 9999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC-------------------------CCcceEEEEeCCCCCcEEE
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-------------------------HTHWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------------------~~~~v~~v~~~~~~~~~l~ 269 (346)
+|+ ++. +|++++.|+.|++||+++ .+++..+.. ....|.+++|+|++ .+|+
T Consensus 248 ~~s-d~~-~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~ 323 (450)
T 2vdu_B 248 CCG-KDY-LLLSAGGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL-PFVA 323 (450)
T ss_dssp EEC-STT-EEEEEESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS-SEEE
T ss_pred EEC-CCC-EEEEEeCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC-CEEE
Confidence 999 887 899999999999999997 445555542 23568999999999 8888
Q ss_pred Eec-CCCeEEEEec--CCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeec-------CCeE
Q 019059 270 SAG-TDSTVNLWLV--STSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY-------DGRV 339 (346)
Q Consensus 270 s~~-~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------d~~v 339 (346)
+++ .|+.|++|++ ... .....+..+..| ..|.+++|+|++ ++++.+. +..|
T Consensus 324 ~~~~~d~~i~iw~~~~~~~----------------~~l~~~~~~~~~-~~v~~~~~~~~~--~~v~~~~~~~~~~~~~~i 384 (450)
T 2vdu_B 324 FFVEATKCIIILEMSEKQK----------------GDLALKQIITFP-YNVISLSAHNDE--FQVTLDNKESSGVQKNFA 384 (450)
T ss_dssp EEETTCSEEEEEEECSSST----------------TCEEEEEEEECS-SCEEEEEEETTE--EEEEECCTTCCSSCCCSE
T ss_pred EEECCCCeEEEEEeccCCC----------------CceeeccEeccC-CceEEEEecCCc--EEEEEecccCCCCCCcce
Confidence 888 8999999999 430 001556667777 679999999953 4555433 5568
Q ss_pred EEeeec
Q 019059 340 RNHMLE 345 (346)
Q Consensus 340 ~vw~~~ 345 (346)
.+|.++
T Consensus 385 ~v~~~~ 390 (450)
T 2vdu_B 385 KFIEYN 390 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888764
No 98
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.3e-33 Score=236.85 Aligned_cols=225 Identities=13% Similarity=0.092 Sum_probs=178.3
Q ss_pred CCCCeEEEEEecCCCCeEEEee------eeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCcccee
Q 019059 39 KEENEVHLLRLSSGGTELICEG------LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLER 112 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~ 112 (346)
..++.+++|++...+..+.... ...+...+.+++|+|||+.++++. ++.|++|+|||++ +.++
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as--~~~d~~i~iwd~~---------~~~~ 169 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIAS--SKVPAIMRIIDPS---------DLTE 169 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEE--SCSSCEEEEEETT---------TTEE
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEE--CCCCCEEEEeECC---------CCcE
Confidence 4577899999987665443322 123345689999999999988764 6789999999998 6777
Q ss_pred eeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC--
Q 019059 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES-- 190 (346)
Q Consensus 113 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-- 190 (346)
+..+ .|...|.+++|+|+|+ +++++.++.+++|+..++..... .....|...+.+++|+|++..+++++.|+
T Consensus 170 ~~~~-~~~~~V~~v~fspdg~--~l~s~s~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 170 KFEI-ETRGEVKDLHFSTDGK--VVAYITGSSLEVISTVTGSCIAR---KTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp EEEE-ECSSCCCEEEECTTSS--EEEEECSSCEEEEETTTCCEEEE---ECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred EEEe-CCCCceEEEEEccCCc--eEEeccceeEEEEEeccCcceee---eecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 7777 4778899999999999 44444467788888776543322 22345677899999999999999998776
Q ss_pred --eEEEEEccCCCcc----ceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceee-ecCCCcceEEEEe
Q 019059 191 --SVQFWDLRSMGKT----NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE-LPGHTHWTWAVCC 260 (346)
Q Consensus 191 --~i~i~d~~~~~~~----~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~v~~ 260 (346)
.+++||+...... ..+. +| |++++|+|+++ +|++|+.|++|+|||+++ .+++.. +.+|...|++|+|
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~-~lasgs~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGE-LAVLASNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEE
T ss_pred eeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCC-ceEEEcCCCEEEEEECCC-CcEEEEecCcccCCEEEEEE
Confidence 6888998866532 2222 33 99999999998 999999999999999997 556766 4789999999999
Q ss_pred CCCCCcEEEEecCCCeEEEEecCC
Q 019059 261 NPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 261 ~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+|+| ++|+++|.|++|+|||+..
T Consensus 321 Spdg-~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 321 SPDS-TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CTTS-CEEEEEETTSEEEEEECCT
T ss_pred CCCC-CEEEEEeCCCeEEEEEcCC
Confidence 9999 9999999999999999965
No 99
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.1e-33 Score=240.89 Aligned_cols=295 Identities=10% Similarity=0.033 Sum_probs=190.6
Q ss_pred eccccee--eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCC------eEEEeeeeccccceEEeeecC------
Q 019059 10 YGLKYQA--RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGT------ELICEGLFSHPNEIWDLSSCP------ 75 (346)
Q Consensus 10 ~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~h~~~v~~~~~~~------ 75 (346)
|.+.++. ..+.+....++...++.. +.++.+.+|.+..+.. .........+...+..+.|++
T Consensus 10 ~~lpl~~~p~~~~w~~~~~~~~~l~a~----g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (393)
T 4gq1_A 10 YQLPLNVRPYTTTWCSQSPSCSNLLAI----GHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSE 85 (393)
T ss_dssp EECCTTCCEEEEEECTTSGGGTTEEEE----EESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEEC
T ss_pred eEecCCCCCeEEEEeCCCCCCCCEEEE----ECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccc
Confidence 4444433 345555556666555543 2467788887654321 111122233445555555543
Q ss_pred --------------CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeec--------CCC
Q 019059 76 --------------FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS--------SGR 133 (346)
Q Consensus 76 --------------~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~ 133 (346)
++..+++ ++.|++|+|||+.... ......+..+.+|.+.|.+++|+| +++
T Consensus 86 ~~~~~~~~~~~~~~~~~~las----~~~d~~v~lw~~~~~~----~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~ 157 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLAC----VCQDNTVRLIITKNET----IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ 157 (393)
T ss_dssp C----------CCEEEEEEEE----EETTSCEEEEEEETTE----EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE
T ss_pred cccCCCcceeecCCCCCEEEE----EeCCCcEEEEECCCCc----cceeeeecccCCCCCceEEEEEccccccccCCCCC
Confidence 2333444 4789999999987210 001234456789999999999998 666
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCC-cEEEEecCCeEEEEEccCCCccceee-----
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDV-NAVAATCESSVQFWDLRSMGKTNSIE----- 207 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~----- 207 (346)
++++++.|++|+|||+.++....... .|...+.+++|+|++. .+++++.|+.|++||+++++......
T Consensus 158 -~las~s~D~tv~~Wd~~~~~~~~~~~-----~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 158 -VIASVGDDCTLIIWRLTDEGPILAGY-----PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp -EEEEEETTSEEEEEEEETTEEEEEEE-----ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred -EEEEEECCCeEEEEECCCCceeeeec-----CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 47777899999999998655433333 2455899999999875 68888999999999999876432221
Q ss_pred -------------------ccc---eeEEEeC-CCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCC--
Q 019059 208 -------------------HAH---VRNVDYD-TKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP-- 262 (346)
Q Consensus 208 -------------------~~~---v~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~-- 262 (346)
.++ +.++.|+ |++. .+++++.|+.+++||++. ......+..|...+..+.+.|
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~ 309 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNV 309 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSCSE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEcccc
Confidence 122 7788886 7887 899999999999999986 334444444444443333332
Q ss_pred -----------------CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCC
Q 019059 263 -----------------EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSR 325 (346)
Q Consensus 263 -----------------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 325 (346)
.+..++++|+.|+.|+|||+.+ +++...+.+|..+|++++|+|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-------------------~~~~~~~~~~~~~V~svafspd 370 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYE-------------------KDSNSIPIQLGMPIVDFCWHQD 370 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTC-------------------TTCCEEEEECSSCEEEEEECTT
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCC-------------------CcEEEEecCCCCcEEEEEEcCC
Confidence 2325678889999999999998 7777777888899999999999
Q ss_pred CCcEEEEeecCCeEEEeeec
Q 019059 326 EPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 326 ~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+ +||+++.|| +.+|.+.
T Consensus 371 G~-~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 371 GS-HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SS-EEEEEESSE-EEEEEEG
T ss_pred CC-EEEEEeCCC-eEEEEEe
Confidence 97 899988665 6666654
No 100
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.9e-33 Score=235.55 Aligned_cols=236 Identities=11% Similarity=0.094 Sum_probs=181.3
Q ss_pred eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEE
Q 019059 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS 139 (346)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 139 (346)
....|.+.|.+++|+|+++.|+++ +.+ .+++|++. ..+...... ...+..+++.++++.+++++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g----~~~-~~~iw~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILS----TLK-SFEIYNVH---------PVAHIMSQE--MRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEE----CSS-EEEEEEET---------TEEEEEEEE--CSCCCEEEECTTSSEEEEEC
T ss_pred ccccCCCceEEEEECCCCCEEEEE----cCC-EEEEEecC---------Ccceeeeee--cCCeEEEEEcCCCCEEEEEE
Confidence 446799999999999999877764 444 57899987 444444332 23578888998888655667
Q ss_pred ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCC-CccceeeccceeEEEeCC
Q 019059 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSM-GKTNSIEHAHVRNVDYDT 218 (346)
Q Consensus 140 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~v~~~~~~~ 218 (346)
+.|+.|++||+.+++....+. +...+.+++|+++. +++ +.++.|++||+.++ +.+..+.. ....+++++
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~------~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~ 147 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK------VDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR-FGGVCEFSN 147 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE------CSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE-EEEEEEEET
T ss_pred CCccEEEEEECCCCcEEEEEE------CCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc-CCceEEEEc
Confidence 778999999998765443332 23489999998753 333 35889999999988 66666654 333344555
Q ss_pred CCCcEEEE--ecCCCeEEEEEcccCC--------------cc-eeeecCCCcceEEEEeCCCCCcEEEEecCCCe-EEEE
Q 019059 219 KKKHLLVT--AADESGIHLWDLRMLK--------------AP-IQELPGHTHWTWAVCCNPEYDGFILSAGTDST-VNLW 280 (346)
Q Consensus 219 ~~~~~l~~--~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~-i~iw 280 (346)
. .++. |+.||.|++||++... .+ +..+.+|...|++++|+|++ .+|++++.|++ |+||
T Consensus 148 --~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 148 --G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVF 223 (355)
T ss_dssp --T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEE
T ss_pred --c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEE
Confidence 3 4444 7899999999998633 12 77889999999999999999 99999999998 9999
Q ss_pred ecCCCCCCCCCcccccCCccccccccccccc-c-ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 281 LVSTSNHDELPSESLVESPNQRANSLLNSYS-D-YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+++ ++++..+. + |...|++++|+|+++ +|++++.|++|++|+++
T Consensus 224 d~~~-------------------~~~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 224 KTED-------------------GVLVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ETTT-------------------CCEEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESS
T ss_pred ECCC-------------------CcEEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEcc
Confidence 9998 88888887 5 999999999999997 89999999999999985
No 101
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.9e-32 Score=234.84 Aligned_cols=261 Identities=13% Similarity=0.132 Sum_probs=207.3
Q ss_pred CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec
Q 019059 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (346)
..++.|.+|++.... ....+..| ..+.+++|+|+++.++++ ++.|+.|++||+. .++.+..+..
T Consensus 9 ~~d~~v~v~d~~~~~---~~~~~~~~-~~~~~~~~s~dg~~l~~~---~~~d~~i~v~d~~---------~~~~~~~~~~ 72 (391)
T 1l0q_A 9 SESDNISVIDVTSNK---VTATIPVG-SNPMGAVISPDGTKVYVA---NAHSNDVSIIDTA---------TNNVIATVPA 72 (391)
T ss_dssp TTTTEEEEEETTTTE---EEEEEECS-SSEEEEEECTTSSEEEEE---EGGGTEEEEEETT---------TTEEEEEEEC
T ss_pred CCCCEEEEEECCCCe---EEEEeecC-CCcceEEECCCCCEEEEE---CCCCCeEEEEECC---------CCeEEEEEEC
Confidence 467899999887542 22333444 568999999999988665 3688999999998 6677777765
Q ss_pred cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcE-EEEecCCeEEEEEc
Q 019059 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA-VAATCESSVQFWDL 197 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~ 197 (346)
+. .+.+++|+|++++++++++.++.|++||+.+++....+.. ...+.+++|+|+++.+ ++++.++.|++||+
T Consensus 73 ~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 73 GS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT------GKSPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp SS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC------CCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 54 8999999999997555656689999999987654332221 2267899999999988 56667999999999
Q ss_pred cCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec---C
Q 019059 198 RSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG---T 273 (346)
Q Consensus 198 ~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~---~ 273 (346)
++++....+.... +.+++|+|+++.++++++.++.|++||+++ ...+..+. +...+.+++|+|++ .+|++++ .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g-~~l~~~~~~~~ 222 (391)
T 1l0q_A 146 VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEG-TKAYVTNVDKY 222 (391)
T ss_dssp TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTS-SEEEEEEECSS
T ss_pred CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCC-CEEEEEecCcC
Confidence 9998877776444 999999999985557888999999999987 44555554 56788999999999 7777777 6
Q ss_pred CCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 274 DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 274 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.|++||+++ ++.+..+..|.. +.+++|+|+++.++++++.|+.|++||++
T Consensus 223 ~~~v~~~d~~~-------------------~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 223 FNTVSMIDTGT-------------------NKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp CCEEEEEETTT-------------------TEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEECCC-------------------CeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 89999999998 677777776654 78999999998566888999999999975
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.2e-33 Score=247.59 Aligned_cols=211 Identities=15% Similarity=0.222 Sum_probs=172.4
Q ss_pred eeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC-CCCcEEEEecC
Q 019059 111 ERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE 189 (346)
Q Consensus 111 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 189 (346)
........|...|++++|+|.+..++++++.||.|+|||+.++...... ...+|...|.+++|+| ++..|++++.|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~---~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI---KGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE---CCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE---EccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3444566789999999999977767888899999999999876543322 2346788999999998 57889999999
Q ss_pred CeEEEEEccCCCccceeeccc-----eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC
Q 019059 190 SSVQFWDLRSMGKTNSIEHAH-----VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
++|++||++++... .+...+ +.+++|+|++. +|++|+.||.|++||++. ..+..+.+|...|++++|+|++
T Consensus 187 ~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~ 262 (435)
T 4e54_B 187 GTTRLQDFKGNILR-VFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCC 262 (435)
T ss_dssp SCEEEEETTSCEEE-EEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTC
T ss_pred CEEEEeeccCCcee-EEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCC
Confidence 99999999865432 232222 78999999998 999999999999999974 4677889999999999999999
Q ss_pred CcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 265 DGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 265 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
+.+|++++.|+.|+|||++.... ...+....+|...|++++|+|++. +|++++.|+.|++|++
T Consensus 263 ~~~~~s~s~d~~v~iwd~~~~~~----------------~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 263 DWFLATASVDQTVKIWDLRQVRG----------------KASFLYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSA 325 (435)
T ss_dssp SSEEEEEETTSBCCEEETTTCCS----------------SSCCSBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEES
T ss_pred ceEEEEecCcceeeEEecccccc----------------cceEEEeeeccccccceeECCCCC-eeEEEcCCCEEEEEEC
Confidence 67899999999999999987110 112233457899999999999997 8999999999999997
Q ss_pred c
Q 019059 345 E 345 (346)
Q Consensus 345 ~ 345 (346)
.
T Consensus 326 ~ 326 (435)
T 4e54_B 326 S 326 (435)
T ss_dssp S
T ss_pred C
Confidence 5
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4e-32 Score=238.82 Aligned_cols=267 Identities=16% Similarity=0.358 Sum_probs=215.3
Q ss_pred eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw 96 (346)
..+..+.++ ...++.| +.++.+.+|++.... ....+.+|...|.+++|+ +..++++ +.|+.|++|
T Consensus 160 ~~v~~~~~~--~~~l~s~----~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~----s~dg~i~~w 224 (445)
T 2ovr_B 160 GGVWSSQMR--DNIIISG----STDRTLKVWNAETGE---CIHTLYGHTSTVRCMHLH--EKRVVSG----SRDATLRVW 224 (445)
T ss_dssp SCEEEEEEE--TTEEEEE----ETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEE--TTEEEEE----ETTSEEEEE
T ss_pred CCEEEEEec--CCEEEEE----eCCCeEEEEECCcCc---EEEEECCCCCcEEEEEec--CCEEEEE----eCCCEEEEE
Confidence 334444443 2345444 467899999887642 345677899999999996 4556664 689999999
Q ss_pred ecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe
Q 019059 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (346)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (346)
|+. ..+.+..+..|...|.+++| ++. .+++++.|+.|++||+.+++....+ .+|...+.+++|
T Consensus 225 d~~---------~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~ 287 (445)
T 2ovr_B 225 DIE---------TGQCLHVLMGHVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETETCLHTL-----QGHTNRVYSLQF 287 (445)
T ss_dssp ESS---------SCCEEEEEECCSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGTEEEEEE-----CCCSSCEEEEEE
T ss_pred ECC---------CCcEEEEEcCCcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCCcEeEEe-----cCCCCceEEEEE
Confidence 998 67788889999999999999 555 3788888999999999865432222 346678999999
Q ss_pred CCCCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC---
Q 019059 177 DPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG--- 250 (346)
Q Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--- 250 (346)
++..+++++.|+.|++||+++++.+..+. +| +.++.++ +. .+++++.||.|++||+++ ..++..+..
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~ 360 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLT-GHQSLTSGMELK--DN-ILVSGNADSTVKIWDIKT-GQCLQTLQGPNK 360 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEEC-CCCSCEEEEEEE--TT-EEEEEETTSCEEEEETTT-CCEEEEECSTTS
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEc-CCcccEEEEEEe--CC-EEEEEeCCCeEEEEECCC-CcEEEEEccCCC
Confidence 68899999999999999999999887776 44 7777774 44 899999999999999987 557777775
Q ss_pred CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc-----ccccceeeEEEeCCC
Q 019059 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY-----SDYEDSVYGLAWSSR 325 (346)
Q Consensus 251 ~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 325 (346)
|...|.+++|+ + .+|++++.||.|++||+++ ++.+..+ .+|.+.|++++|+|+
T Consensus 361 ~~~~v~~~~~~--~-~~l~s~~~dg~v~iwd~~~-------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~ 418 (445)
T 2ovr_B 361 HQSAVTCLQFN--K-NFVITSSDDGTVKLWDLKT-------------------GEFIRNLVTLESGGSGGVVWRIRASNT 418 (445)
T ss_dssp CSSCEEEEEEC--S-SEEEEEETTSEEEEEETTT-------------------CCEEEEEEECTTGGGTCEEEEEEECSS
T ss_pred CCCCEEEEEEC--C-CEEEEEeCCCeEEEEECCC-------------------CceeeeeeccccCCCCceEEEEEecCC
Confidence 88999999996 4 7899999999999999998 6766666 468889999999999
Q ss_pred CCcEEEEeecCCe----EEEeeec
Q 019059 326 EPWIFASLSYDGR----VRNHMLE 345 (346)
Q Consensus 326 ~~~~l~s~~~d~~----v~vw~~~ 345 (346)
+. ++++++.||+ |.+||++
T Consensus 419 ~~-~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 419 KL-VCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EE-EEEEECSSSSSCCEEEEEECC
T ss_pred EE-EEEEcccCCCCccEEEEEECC
Confidence 86 8999999997 9999986
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.1e-32 Score=230.38 Aligned_cols=260 Identities=14% Similarity=0.210 Sum_probs=206.0
Q ss_pred ceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCe-EEEeeeeccccceEEeeecC--CCCceEEEEeecCCc
Q 019059 14 YQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTE-LICEGLFSHPNEIWDLSSCP--FDQRIFSTVFSTGES 90 (346)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~--~~~~l~~~~~~~~~d 90 (346)
.+...|..+.+++++..++.|. .++.+.+|++...... .....+.+|...|.+++|+| ++..|+++ +.|
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~----~~d 80 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCS----SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA----SYD 80 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE----TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE----ETT
T ss_pred ccccceeEEEEcCCCCEEEEee----CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE----cCC
Confidence 3456788888889998888874 6789999999865432 34466778999999999999 47777775 689
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeec------
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSK------ 162 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~------ 162 (346)
+.|++||+............+.+..+..|...|.+++|+|+ +. .+++++.|+.|++||+.+.+........
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 99999999843222222233667788899999999999999 77 4777788999999999877654433211
Q ss_pred --ccCCCceeeEEEEeCCC---CCcEEEEecCCeEEEEEccCCCc--cceeeccc---eeEEEeCCCCC---cEEEEecC
Q 019059 163 --QSSGMLHYLSGGAWDPH---DVNAVAATCESSVQFWDLRSMGK--TNSIEHAH---VRNVDYDTKKK---HLLVTAAD 229 (346)
Q Consensus 163 --~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~---v~~~~~~~~~~---~~l~~~~~ 229 (346)
....+...+.+++|+|+ +..+++++.++.+.+|+...++. ...+. +| |.+++|+|++. .+|++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcC
Confidence 12246668999999997 88899999999998888777664 33333 44 99999999982 38999999
Q ss_pred CCeEEEEEcccCC---------------------------------------------cceeeecCCCcceEEEEeCCCC
Q 019059 230 ESGIHLWDLRMLK---------------------------------------------APIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 230 dg~i~i~d~~~~~---------------------------------------------~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
||.|++||++... .++..+.+|...|++++|+|++
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 9999999998631 4566778899999999999999
Q ss_pred CcEEEEecCCCeEEEEecCC
Q 019059 265 DGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 265 ~~~l~s~~~d~~i~iwd~~~ 284 (346)
.+|++++.||.|++||+..
T Consensus 319 -~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 319 -TILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp -CCEEEEETTSCEEEEEECT
T ss_pred -CEEEEecCCCcEEEEecCc
Confidence 9999999999999999997
No 105
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-32 Score=238.32 Aligned_cols=236 Identities=14% Similarity=0.248 Sum_probs=190.4
Q ss_pred ccccc--eEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec-cCCceEEEEeecCCCCcEEEE
Q 019059 63 SHPNE--IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLVS 139 (346)
Q Consensus 63 ~h~~~--v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 139 (346)
+|... +.+++|++ ..++++ +.|+.|++|++. .++....+.. |...|.+++|+|+++. ++++
T Consensus 89 ~~~~~~~~~~~~~s~--~~l~~~----~~d~~v~lw~~~---------~~~~~~~~~~~~~~~v~~v~~s~~~~~-l~~~ 152 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN--LNVVAV----ALERNVYVWNAD---------SGSVSALAETDESTYVASVKWSHDGSF-LSVG 152 (401)
T ss_dssp TCCCCTTCBCEEECT--TSEEEE----EETTEEEEEETT---------TCCEEEEEECCTTCCEEEEEECTTSSE-EEEE
T ss_pred CCcCCceEEEEeecC--CCEEEE----ECCCeEEEeeCC---------CCcEeEeeecCCCCCEEEEEECCCCCE-EEEE
Confidence 45544 34466664 567665 589999999998 5555555544 7889999999999984 7777
Q ss_pred ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC-ccceeeccc---eeEEE
Q 019059 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH---VRNVD 215 (346)
Q Consensus 140 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~---v~~~~ 215 (346)
+.||.|++||+.+++....+ .+|...+.+++|+ +..+++++.|+.|++||++... ....+. +| |.+++
T Consensus 153 ~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~ 224 (401)
T 4aez_A 153 LGNGLVDIYDVESQTKLRTM-----AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLA 224 (401)
T ss_dssp ETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEE
T ss_pred CCCCeEEEEECcCCeEEEEe-----cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEE
Confidence 88999999999876543332 2567799999994 5789999999999999999544 444444 45 99999
Q ss_pred eCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec--CCCeEEEEecCCCCCCCCCcc
Q 019059 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG--TDSTVNLWLVSTSNHDELPSE 293 (346)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~ 293 (346)
|+|++. .+++++.|+.|++||+++ ..++..+..|...|.+++|+|++..++++++ .|+.|++||+++
T Consensus 225 ~~~~~~-~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~--------- 293 (401)
T 4aez_A 225 WRSDGL-QLASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT--------- 293 (401)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---------
T ss_pred EcCCCC-EEEEEeCCCeEEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---------
Confidence 999998 899999999999999997 5578888899999999999998867888865 799999999998
Q ss_pred cccCCccccccccccccccccceeeEEEeCCCCCcEEEE--eecCCeEEEeeec
Q 019059 294 SLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFAS--LSYDGRVRNHMLE 345 (346)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s--~~~d~~v~vw~~~ 345 (346)
++++..+. +...|.+++|+|+++ .+++ |+.|+.|++|++.
T Consensus 294 ----------~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 294 ----------GARVNTVD-AGSQVTSLIWSPHSK-EIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp ----------CCEEEEEE-CSSCEEEEEECSSSS-EEEEEECTTTCEEEEEEEE
T ss_pred ----------CCEEEEEe-CCCcEEEEEECCCCC-eEEEEeecCCCcEEEEecC
Confidence 67777765 556799999999998 6666 4489999999975
No 106
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.9e-32 Score=235.16 Aligned_cols=285 Identities=14% Similarity=0.187 Sum_probs=193.9
Q ss_pred cceeeEeeeccCCC-CcceEEEeecccCCCCeEEEEEecCCCCeEEEee----------eeccccceEEeeecCC-CCce
Q 019059 13 KYQARCISDVKADT-DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEG----------LFSHPNEIWDLSSCPF-DQRI 80 (346)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~----------~~~h~~~v~~~~~~~~-~~~l 80 (346)
..+...+..+.+++ ++..+++|. .++.+.+|++........... ..+|...|.+++|+|+ +..+
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~----~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGG----SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEE----TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eccCCcEEEEEEecCCCCEEEEEc----CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 34566788888898 888888874 578999999987543222211 1259999999999994 4455
Q ss_pred EEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCC--cEEEEecCCeEEEEEcCCCCCCce
Q 019059 81 FSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRH--DKLVSIDEENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 81 ~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~d~~i~vwd~~~~~~~~~ 158 (346)
+++ +.|+.|++||+. ..+....+ .+...+.++.|++.+.. ++++++.++.|++||+.+++....
T Consensus 116 ~s~----~~d~~i~iwd~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 181 (408)
T 4a11_B 116 TSS----SFDKTLKVWDTN---------TLQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHI 181 (408)
T ss_dssp EEE----ETTSEEEEEETT---------TTEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEE
T ss_pred EEE----eCCCeEEEeeCC---------CCccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeee
Confidence 553 689999999998 56666666 47788999999986432 577778899999999987654433
Q ss_pred eeecccCCCceeeEEEEeCCCCCc-EEEEecCCeEEEEEccCCC-ccceee--------------ccc---eeEEEeCCC
Q 019059 159 VQSKQSSGMLHYLSGGAWDPHDVN-AVAATCESSVQFWDLRSMG-KTNSIE--------------HAH---VRNVDYDTK 219 (346)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~-~~~~~~--------------~~~---v~~~~~~~~ 219 (346)
+ ..|...+.+++|+|+++. +++++.|+.|++||++++. ....+. ..| |.+++|+|+
T Consensus 182 ~-----~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 182 L-----QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp E-----CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred e-----cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 3 246668999999999996 7788899999999998765 222220 133 999999999
Q ss_pred CCcEEEEecCCCeEEEEEcccCC----------------------------------------------cceeeecCCCc
Q 019059 220 KKHLLVTAADESGIHLWDLRMLK----------------------------------------------APIQELPGHTH 253 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~----------------------------------------------~~~~~~~~~~~ 253 (346)
+. .+++++.|+.|++||+++.. .++..+.+|..
T Consensus 257 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 257 GL-HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp SS-EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS
T ss_pred CC-EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC
Confidence 98 89999999999999987532 23455677999
Q ss_pred ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEe
Q 019059 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASL 333 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 333 (346)
.|++++|+|++ .+|++++.||.|++||+++ .+++.....+. ....+.|.....+.+.
T Consensus 336 ~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~-------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 392 (408)
T 4a11_B 336 TVDCCVFQSNF-QELYSGSRDCNILAWVPSL-------------------YEPVPDDDETT---TKSQLNPAFEDAWSSS 392 (408)
T ss_dssp CEEEEEEETTT-TEEEEEETTSCEEEEEECC-------------------------------------------------
T ss_pred eEEEEEEcCCC-CEEEEECCCCeEEEEeCCC-------------------CCccCCCCceE---eccccccccceeeccc
Confidence 99999999999 9999999999999999998 55554433322 2234444333466778
Q ss_pred ecCCeEEEeee
Q 019059 334 SYDGRVRNHML 344 (346)
Q Consensus 334 ~~d~~v~vw~~ 344 (346)
+.|+.+++|+.
T Consensus 393 ~~~~~~~~W~~ 403 (408)
T 4a11_B 393 DEEGGTSAWSH 403 (408)
T ss_dssp -----------
T ss_pred CccCceeecCC
Confidence 88999999985
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=237.85 Aligned_cols=235 Identities=9% Similarity=-0.059 Sum_probs=179.1
Q ss_pred EEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEE
Q 019059 69 WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLW 148 (346)
Q Consensus 69 ~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vw 148 (346)
....+.+++..++++ +.|+.|++||+. ..+.+..+. ...|.++.|+|+ +++++.|+.|++|
T Consensus 40 ~~~~~~~d~~~l~sg----~~Dg~v~iwd~~---------~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w 100 (343)
T 3lrv_A 40 LNKSMYYDKWVCMCR----CEDGALHFTQLK---------DSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLL 100 (343)
T ss_dssp ECSSSSEEEEEEEEE----EETTEEEEEEES---------SSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEE
T ss_pred hhhhhcCCCCEEEEE----CCCCcEEEEECC---------CCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEE
Confidence 334556667667664 799999999998 556666664 456788888887 7788889999999
Q ss_pred EcCCCC-----CCceeeecccCCCceeeEEEEeCC--CCCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCC
Q 019059 149 SLDCSN-----KNAQVQSKQSSGMLHYLSGGAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDT 218 (346)
Q Consensus 149 d~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~ 218 (346)
+..... ............|...|.+++|+| +++++++++.|+.|++||+++++........+ +.+++|+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT
T ss_pred EccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC
Confidence 876321 011111112224556899999999 99999999999999999999998865543233 99999999
Q ss_pred CCCcEEEEecCCCeEEEEEcccCCcceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccC
Q 019059 219 KKKHLLVTAADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVE 297 (346)
Q Consensus 219 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 297 (346)
++. ++++|+.||.|++||+++.......+.. |..+|++++|+|++ .+|++++ |+.|++||++.
T Consensus 181 dg~-~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~------------- 244 (343)
T 3lrv_A 181 DSL-LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRK------------- 244 (343)
T ss_dssp TSC-EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTS-------------
T ss_pred CCC-EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCC-------------
Confidence 998 9999999999999999985433377887 99999999999999 9999999 45999999998
Q ss_pred Ccccccccccccccc---ccceee--EEEeCCCCCcEEEEeec-CCeEEEeeec
Q 019059 298 SPNQRANSLLNSYSD---YEDSVY--GLAWSSREPWIFASLSY-DGRVRNHMLE 345 (346)
Q Consensus 298 ~~~~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~~l~s~~~-d~~v~vw~~~ 345 (346)
.+.+..+.. |...+. +++|+|+++ +|++++. |+.+++|+++
T Consensus 245 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 245 ------DVGTLAYPTYTIPEFKTGTVTYDIDDSGK-NMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp ------STTCBSSCCCBC-----CCEEEEECTTSS-EEEEEETTTTEEEEEEEC
T ss_pred ------CCcceeecccccccccccceEEEECCCCC-EEEEecCCCCcEEEEEEc
Confidence 444444332 434444 699999997 8888887 9999999875
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=7.3e-32 Score=236.27 Aligned_cols=278 Identities=12% Similarity=0.086 Sum_probs=213.8
Q ss_pred ccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEe--eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecC
Q 019059 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICE--GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIP 99 (346)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~ 99 (346)
+.++++ .+++++. ..++.+.+|++.......... .+.+|.+.|.+++|+|++..++++ +.|+.|++||++
T Consensus 128 ~~~s~~-~~~~~~~---~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~----~~d~~v~~~d~~ 199 (433)
T 3bws_A 128 VRFIDN-TRLAIPL---LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQ----MQANAVHVFDLK 199 (433)
T ss_dssp CEESSS-SEEEEEB---TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEE----GGGTEEEEEETT
T ss_pred EEEeCC-CeEEEEe---CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEE----CCCCEEEEEECC
Confidence 445553 3444332 345779999877643211111 345788999999999988776664 688999999998
Q ss_pred cccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC
Q 019059 100 ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179 (346)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 179 (346)
..+.+..+..|...+.+++|+|+++.++++++.++.|++||+.+++....+. ....+.+++|+|+
T Consensus 200 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~ 264 (433)
T 3bws_A 200 ---------TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD------KIGLPRGLLLSKD 264 (433)
T ss_dssp ---------TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC------CCSEEEEEEECTT
T ss_pred ---------CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec------CCCCceEEEEcCC
Confidence 6677778888999999999999999644555579999999998654322211 1236899999999
Q ss_pred CCcEEEEe--------cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC
Q 019059 180 DVNAVAAT--------CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250 (346)
Q Consensus 180 ~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 250 (346)
++.+++++ .|+.|++||+++++....+.... +.+++|+|+++.++++++.++.|++||+++ .+.+..+.
T Consensus 265 g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~- 342 (433)
T 3bws_A 265 GKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP- 342 (433)
T ss_dssp SSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-
T ss_pred CCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-
Confidence 99999888 47899999999888766664333 899999999986778889999999999986 54566665
Q ss_pred CCcceEEEEeCCCCCcEEEEecC---------------CCeEEEEecCCCCCCCCCcccccCCccccccccccccccccc
Q 019059 251 HTHWTWAVCCNPEYDGFILSAGT---------------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYED 315 (346)
Q Consensus 251 ~~~~v~~v~~~~~~~~~l~s~~~---------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (346)
+...+.+++|+|++ .+|++++. ||.|++||+.+ ++.+..+..+ .
T Consensus 343 ~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~-------------------~~~~~~~~~~-~ 401 (433)
T 3bws_A 343 VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT-------------------DTVKEFWEAG-N 401 (433)
T ss_dssp CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT-------------------TEEEEEEECS-S
T ss_pred CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEEECCC-------------------CcEEEEecCC-C
Confidence 67889999999999 77777765 57999999988 6777766654 4
Q ss_pred eeeEEEeCCCCCcEEEEee-cCCeEEEeeecC
Q 019059 316 SVYGLAWSSREPWIFASLS-YDGRVRNHMLEK 346 (346)
Q Consensus 316 ~v~~~~~~~~~~~~l~s~~-~d~~v~vw~~~~ 346 (346)
.+.+++|+|+++ .|++++ .|+.|++|++++
T Consensus 402 ~~~~~~~s~dg~-~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 402 QPTGLDVSPDNR-YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SEEEEEECTTSC-EEEEEETTTTEEEEEEETT
T ss_pred CCceEEEcCCCC-EEEEEECCCCeEEEEEecC
Confidence 589999999998 555555 599999999874
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-31 Score=233.86 Aligned_cols=257 Identities=18% Similarity=0.347 Sum_probs=213.9
Q ss_pred CcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCC
Q 019059 27 DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (346)
Q Consensus 27 ~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (346)
++..++.|. .++.+.+|++.... ....+.+|.+.|.+++|+ +..++++ +.|+.|++||+.
T Consensus 128 ~g~~l~sg~----~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~--~~~l~s~----~~dg~i~vwd~~------- 187 (445)
T 2ovr_B 128 CGNRIVSGS----DDNTLKVWSAVTGK---CLRTLVGHTGGVWSSQMR--DNIIISG----STDRTLKVWNAE------- 187 (445)
T ss_dssp ETTEEEEEE----TTSCEEEEETTTCC---EEEECCCCSSCEEEEEEE--TTEEEEE----ETTSCEEEEETT-------
T ss_pred cCCEEEEEE----CCCcEEEEECCCCc---EEEEEcCCCCCEEEEEec--CCEEEEE----eCCCeEEEEECC-------
Confidence 355666663 67899999987643 345677899999999998 4456654 689999999998
Q ss_pred CccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEE
Q 019059 107 SPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (346)
..+.+..+..|...|.+++|++ . .+++++.|+.|++||+.+++....+ .+|...+.+++| ++..++++
T Consensus 188 --~~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~~-----~~~~~~v~~~~~--~~~~l~~~ 255 (445)
T 2ovr_B 188 --TGECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHVL-----MGHVAAVRCVQY--DGRRVVSG 255 (445)
T ss_dssp --TTEEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEEE-----ECCSSCEEEEEE--CSSCEEEE
T ss_pred --cCcEEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEEE-----cCCcccEEEEEE--CCCEEEEE
Confidence 6788889999999999999963 3 3778889999999999876543332 246668999999 67899999
Q ss_pred ecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCC
Q 019059 187 TCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE 263 (346)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~ 263 (346)
+.|+.|++||+++++.+..+. +| +.+++| ++. .+++++.|+.|++||+++ ..++..+.+|...+.++.++
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~-- 328 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELK-- 328 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEEC-CCSSCEEEEEE--CSS-EEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEE--
T ss_pred cCCCEEEEEECCCCcEeEEec-CCCCceEEEEE--CCC-EEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEe--
Confidence 999999999999998887776 44 999999 565 899999999999999997 55788899999999988875
Q ss_pred CCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccc---ccceeeEEEeCCCCCcEEEEeecCCeEE
Q 019059 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLSYDGRVR 340 (346)
Q Consensus 264 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~~d~~v~ 340 (346)
+ .+|++++.||.|++||+++ ++++..+.. |...|++++|++ + +|++++.||.|+
T Consensus 329 ~-~~l~~~~~dg~i~vwd~~~-------------------~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~s~~~dg~v~ 385 (445)
T 2ovr_B 329 D-NILVSGNADSTVKIWDIKT-------------------GQCLQTLQGPNKHQSAVTCLQFNK--N-FVITSSDDGTVK 385 (445)
T ss_dssp T-TEEEEEETTSCEEEEETTT-------------------CCEEEEECSTTSCSSCEEEEEECS--S-EEEEEETTSEEE
T ss_pred C-CEEEEEeCCCeEEEEECCC-------------------CcEEEEEccCCCCCCCEEEEEECC--C-EEEEEeCCCeEE
Confidence 4 7899999999999999998 777777765 888999999974 4 899999999999
Q ss_pred Eeeec
Q 019059 341 NHMLE 345 (346)
Q Consensus 341 vw~~~ 345 (346)
+|++.
T Consensus 386 iwd~~ 390 (445)
T 2ovr_B 386 LWDLK 390 (445)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99975
No 110
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-32 Score=232.54 Aligned_cols=252 Identities=15% Similarity=0.283 Sum_probs=201.6
Q ss_pred ecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCC--CCceEEEEeec
Q 019059 10 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFST 87 (346)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~~~ 87 (346)
..++.+...|..+.+++++..+++|. .++.|.+|++..... .....+.+|.+.|.+++|+|+ +..|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~----~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~---- 75 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASC---- 75 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEE----TTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEE----
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEE----CCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEe----
Confidence 34455667788888999999998874 578999999975432 334667789999999999987 7777775
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeecccC
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
+.|+.|++||+.. .....+..+..|...|.+++|+|+ +. ++++++.|+.|++||+.+......... .
T Consensus 76 ~~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~---~ 144 (379)
T 3jrp_A 76 SYDGKVLIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIII---D 144 (379)
T ss_dssp ETTSCEEEEEEET-------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEEE---E
T ss_pred ccCCEEEEEEcCC-------CceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEEe---c
Confidence 6899999999982 122377778889999999999999 66 477778899999999987654333332 2
Q ss_pred CCceeeEEEEeCC-------------CCCcEEEEecCCeEEEEEccCCCccc----eeeccc---eeEEEeCCC---CCc
Q 019059 166 GMLHYLSGGAWDP-------------HDVNAVAATCESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTK---KKH 222 (346)
Q Consensus 166 ~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~---v~~~~~~~~---~~~ 222 (346)
.|...+.+++|+| ++..+++++.|+.|++||++++.... .+. +| |.+++|+|+ +.
T Consensus 145 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~- 222 (379)
T 3jrp_A 145 AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRS- 222 (379)
T ss_dssp CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSE-
T ss_pred CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCC-
Confidence 3566899999999 68999999999999999999876432 222 34 999999999 66
Q ss_pred EEEEecCCCeEEEEEcccCCc----ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 223 LLVTAADESGIHLWDLRMLKA----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 223 ~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+|++++.||.|++||++.... .+.....|...|.+++|+|++ .+|++++.||.|++|++..
T Consensus 223 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 223 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEE
T ss_pred eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCC
Confidence 899999999999999987432 222233488899999999999 9999999999999999984
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-32 Score=240.14 Aligned_cols=263 Identities=9% Similarity=0.034 Sum_probs=197.9
Q ss_pred eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw 96 (346)
.++.++.+++++..++.+ +.+..+. + ... ...+.+|+..|++++|+|+| .++.+.+|
T Consensus 16 ~~v~sv~~SpDG~~iASa----s~D~TV~--d--~~~----~~~l~gh~~~v~~V~FsPdg-----------~~~~~~~~ 72 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTT----FPDISIG--Q--PKY----AKDINCNSKNLFHVKEFPLE-----------FENKLDFE 72 (588)
T ss_dssp SSSCCEEECTTSCEEEEC----SSSEEEE--E--ECC----CSCCSSBGGGTEEEEEECCC-----------CCCTTTTS
T ss_pred ccEEEEEECCCCCEEEEE----cCCceee--c--ccc----cceecCCCccEEEEEECCCC-----------CcceEEEE
Confidence 467788899999999886 3566666 3 111 13446899999999999987 34555566
Q ss_pred ecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe
Q 019059 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (346)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (346)
+.+ ...+..+ .|...|.+++|+|+|+. +++++.||.|++||..+ ..........-....+.+++|
T Consensus 73 ~~~----------~~~~~~~-~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~---~l~~l~~~~~~~~~sv~svaf 137 (588)
T 2j04_A 73 LAQ----------QNGLLNS-QPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK---MLTNLDSKGNLSSRTYHCFEW 137 (588)
T ss_dssp CCC----------SSCSSTT-SCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE---EEEECCCSSCSTTTCEEEEEE
T ss_pred eCC----------CceEeec-CCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc---eeeeccCCCccccccEEEEEE
Confidence 543 2233333 45788999999999995 77778899999999543 111111110000225999999
Q ss_pred CCCCCcEEEEecCCeEEEEEccCCCc-------cceee---ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc
Q 019059 177 DPHDVNAVAATCESSVQFWDLRSMGK-------TNSIE---HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA 243 (346)
Q Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~---~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 243 (346)
+|+|+.|++++.||+|++||+.++.. +.++. .+| |.+++|+|++ +++++.|+.|++||+.....
T Consensus 138 SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 138 NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSS
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCcc
Confidence 99999999999999999999998753 34442 345 9999999998 67788899999999986331
Q ss_pred --ceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 244 --PIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 244 --~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
..+++ .+|...|.+++|+ + ..||+++ +++|++||+.. ++......+|...|.++
T Consensus 215 ~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~-------------------~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 215 QPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKN-------------------YSISSLKTGSLENFHII 271 (588)
T ss_dssp CCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTT-------------------TEEEEEECSCCSCCCEE
T ss_pred ccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCC-------------------CeEEEEEcCCCceEEEE
Confidence 23456 4788999999999 6 7888887 69999999997 55533333799999999
Q ss_pred Ee--CCCCCcEEEEeecCCeEEEeeec
Q 019059 321 AW--SSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 321 ~~--~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+| +|++. .++++++||+ ++|.++
T Consensus 272 a~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 272 PLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred EeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 99 99996 8999999999 999864
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-32 Score=256.22 Aligned_cols=242 Identities=10% Similarity=0.068 Sum_probs=190.7
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
....+|.+.|++++|+|+++.|+++ +.|+.|+||+.. ..+....+ .|...|.+++|+| ++ .+++
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsg----s~Dg~I~lw~~~---------~~~~~~~~-~~~~~V~~l~fsp-g~-~L~S 74 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIA----TVTGEVHIYGQQ---------QVEVVIKL-EDRSAIKEMRFVK-GI-YLVV 74 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEE----ETTSEEEEECST---------TCEEEEEC-SSCCCEEEEEEET-TT-EEEE
T ss_pred ccccCCCCCcEEEEECCCCCEEEEE----eCCCEEEEEeCC---------CcEEEEEc-CCCCCEEEEEEcC-CC-EEEE
Confidence 4456899999999999999888875 689999999987 44554444 5788999999999 76 4777
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccc----------eeec
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN----------SIEH 208 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----------~~~~ 208 (346)
++.|+.|++||+.+++....+. +...|.+++|+|+++++++++.||.|++||+++++... ....
T Consensus 75 ~s~D~~v~lWd~~~~~~~~~~~------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 75 INAKDTVYVLSLYSQKVLTTVF------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EETTCEEEEEETTTCSEEEEEE------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EECcCeEEEEECCCCcEEEEEc------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 7899999999998765433332 33489999999999999999999999999999876431 0112
Q ss_pred cc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC------------------CcceEEEEeCCCCCcE
Q 019059 209 AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH------------------THWTWAVCCNPEYDGF 267 (346)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~~v~~v~~~~~~~~~ 267 (346)
+| |.+++|+|++...+++|+.|+.| +||++. ..++..+..| ...|++++|+|+| .+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~ 225 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LH 225 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CE
Confidence 34 99999999764489999999999 999997 5566666655 5779999999999 99
Q ss_pred EEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccc--c---c-------------cccceeeEEEeC----CC
Q 019059 268 ILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS--Y---S-------------DYEDSVYGLAWS----SR 325 (346)
Q Consensus 268 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-------------~~~~~v~~~~~~----~~ 325 (346)
|++++.|+.|++||+++ ++++.. + . .|..+|++++|+ |+
T Consensus 226 lasgs~Dg~i~lWd~~~-------------------g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd 286 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANS-------------------GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPE 286 (902)
T ss_dssp EEEEETTCCEEEEETTT-------------------CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTT
T ss_pred EEEEECCCeEEEEECCC-------------------CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCC
Confidence 99999999999999987 333221 1 1 245579999995 55
Q ss_pred CCcEEEEeecCC-----eEEEeee
Q 019059 326 EPWIFASLSYDG-----RVRNHML 344 (346)
Q Consensus 326 ~~~~l~s~~~d~-----~v~vw~~ 344 (346)
+..+|++++.|. .+++|++
T Consensus 287 ~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 287 YTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCEEEEeCCCCCCCCCceEEEEec
Confidence 445788887763 7888874
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.9e-31 Score=223.52 Aligned_cols=291 Identities=10% Similarity=0.079 Sum_probs=201.9
Q ss_pred cceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcce
Q 019059 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG 92 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~ 92 (346)
+.+...+.++.+++++..+++|. ++.+.+|++.+.. .... .+...+..+++.++++.++.+ ++.|+.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~-----~~~~~iw~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~d~~ 82 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILST-----LKSFEIYNVHPVA--HIMS---QEMRHLSKVRMLHRTNYVAFV---TGVKEV 82 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEEC-----SSEEEEEEETTEE--EEEE---EECSCCCEEEECTTSSEEEEE---CSSTTE
T ss_pred ccCCCceEEEEECCCCCEEEEEc-----CCEEEEEecCCcc--eeee---eecCCeEEEEEcCCCCEEEEE---ECCccE
Confidence 34456778888999999998874 2357788876532 1111 222357888899888877665 577889
Q ss_pred EEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCC-CCCceeeecccCCCceee
Q 019059 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS-NKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~v 171 (346)
|++||+. +.+.+..+. +...|.+++|+++. ++++ .++.|++||+.+. +....+.. ..
T Consensus 83 v~iWd~~---------~~~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~ 140 (355)
T 3vu4_A 83 VHIWDDV---------KKQDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR--------FG 140 (355)
T ss_dssp EEEEETT---------TTEEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE--------EE
T ss_pred EEEEECC---------CCcEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc--------CC
Confidence 9999998 677777775 67799999998763 3333 4889999999876 43333222 23
Q ss_pred EEEEeCCCCCcEEEE--ecCCeEEEEEccCCC---------------c-cceeeccc---eeEEEeCCCCCcEEEEecCC
Q 019059 172 SGGAWDPHDVNAVAA--TCESSVQFWDLRSMG---------------K-TNSIEHAH---VRNVDYDTKKKHLLVTAADE 230 (346)
Q Consensus 172 ~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~---------------~-~~~~~~~~---v~~~~~~~~~~~~l~~~~~d 230 (346)
..+++++ ..++++ +.+|.|++||+++++ + ...+. +| |.+++|+|++. +|++++.|
T Consensus 141 ~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~-~l~s~s~d 216 (355)
T 3vu4_A 141 GVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSD-MVATCSQD 216 (355)
T ss_dssp EEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCC-EEEEEeCC
Confidence 3445565 556664 579999999999865 1 34444 55 99999999998 99999999
Q ss_pred Ce-EEEEEcccCCcceeeec-C-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccc---ccc
Q 019059 231 SG-IHLWDLRMLKAPIQELP-G-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ---RAN 304 (346)
Q Consensus 231 g~-i~i~d~~~~~~~~~~~~-~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~ 304 (346)
++ |++||+++ ..++..+. + |...|.+++|+|++ .+|++++.|++|++||++.........-.....+.. ...
T Consensus 217 ~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3vu4_A 217 GTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS 294 (355)
T ss_dssp CSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC
T ss_pred CCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccc
Confidence 98 99999997 55788887 5 99999999999999 999999999999999998632211100000000000 000
Q ss_pred cccccc-ccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 305 SLLNSY-SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 305 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.....+ ..+......++|+|+++ .+++++.||.+++|++.
T Consensus 295 ~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 295 LCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEE
T ss_pred eeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEE
Confidence 000001 11222346799999997 89999999999999874
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6.1e-32 Score=236.48 Aligned_cols=260 Identities=18% Similarity=0.271 Sum_probs=196.1
Q ss_pred cceEEeeecCCC----------CceEEEEeecCCcceEEEEecCcccC-----------C--------CCCccceeeeee
Q 019059 66 NEIWDLSSCPFD----------QRIFSTVFSTGESYGAAIWQIPELYG-----------Q--------LNSPQLERIAAL 116 (346)
Q Consensus 66 ~~v~~~~~~~~~----------~~l~~~~~~~~~d~~i~vw~~~~~~~-----------~--------~~~~~~~~~~~~ 116 (346)
-+..++.|.|+. .+++++.++.+....|.+.++..+.. + ...+..+ ....
T Consensus 46 wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~ 124 (430)
T 2xyi_A 46 WPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIE-IEIK 124 (430)
T ss_dssp SCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEE-EEEE
T ss_pred CCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceE-EEEE
Confidence 456778888864 34666655555667788886541100 0 0111122 2344
Q ss_pred eccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCc-----eeeecccCCCceeeEEEEeCCCCC-cEEEEecCC
Q 019059 117 DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNA-----QVQSKQSSGMLHYLSGGAWDPHDV-NAVAATCES 190 (346)
Q Consensus 117 ~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 190 (346)
..|.+.|++++|+|++..++++++.+|.|++|++.+..... ........+|...+.+++|+|++. .|++++.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 58999999999999855567777889999999998621000 000111234667899999999988 888899999
Q ss_pred eEEEEEccCCCcc-------ceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC--cceeeecCCCcceEEE
Q 019059 191 SVQFWDLRSMGKT-------NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK--APIQELPGHTHWTWAV 258 (346)
Q Consensus 191 ~i~i~d~~~~~~~-------~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~v 258 (346)
.|++||+..+... ..+. +| |.+++|+|++..+|++++.|+.|++||++... .++..+..|...|+++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i 283 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCL 283 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEE
Confidence 9999999985431 2222 44 99999999655599999999999999999742 5677788999999999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCe
Q 019059 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGR 338 (346)
Q Consensus 259 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 338 (346)
+|+|+++.+|++|+.||.|++||++. ...++..+..|...|++++|+|+++.+|++++.|+.
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~------------------~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~ 345 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRN------------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 345 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTC------------------TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCC------------------CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc
Confidence 99999955899999999999999997 245677888899999999999999778999999999
Q ss_pred EEEeeec
Q 019059 339 VRNHMLE 345 (346)
Q Consensus 339 v~vw~~~ 345 (346)
|++|++.
T Consensus 346 i~iwd~~ 352 (430)
T 2xyi_A 346 LHVWDLS 352 (430)
T ss_dssp CEEEEGG
T ss_pred EEEEeCC
Confidence 9999985
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.2e-31 Score=215.15 Aligned_cols=266 Identities=9% Similarity=0.050 Sum_probs=188.4
Q ss_pred CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCcc-ceeeeeeec
Q 019059 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQ-LERIAALDA 118 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~~~~~~ 118 (346)
.+..+.+|+..+............|+.+|..+.+.|+...|++++...=+.+.|+.--+.. +... .+.+. ..+
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp-----d~~~~~~~l~-s~g 134 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS-----DDESEKQVLL-KSG 134 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-----------CCEEEE-EEE
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC-----CccccccEEE-eCC
Confidence 3567889988886555666788899999999999999988888763222222333222220 0001 22222 234
Q ss_pred cCCceEEEEeecCCCCcEEEEe---cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC---CCCcEEEEecCCeE
Q 019059 119 HVGKINCVLWWSSGRHDKLVSI---DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP---HDVNAVAATCESSV 192 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i 192 (346)
|...|..+ ++++ ++.++ .|+.|++|++....+..... .+|...+..++|+| ++..|++++.|++|
T Consensus 135 ~~~~v~~l---~~g~--lv~ss~~g~d~~V~~~~~s~dG~~~~s~----~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TI 205 (356)
T 2w18_A 135 NIKAVLGL---TKRR--LVSSSGTLSDQQVEVMTFAEDGGGKENQ----FLMPPEETILTFAEVQGMQEALLGTTIMNNI 205 (356)
T ss_dssp EEEEEEEE---TTTE--EEEEESSSTTCEEEEEEECTTSCEEEEE----EECCCSSCEEEEEEEETSTTEEEEEETTSEE
T ss_pred CeEEEEec---CCCc--EEEecccCCCCcEEEEEECCCCceeeee----ccCCCceeeEEeeccCCCCceEEEecCCCcE
Confidence 55555554 5555 44443 59999999996533222211 13555788888988 77899999999999
Q ss_pred EEEEccCCCccceeeccc-----eeEEEeCCCCCcEE------------EEecCCCeEEEEEcccCCcceeee-----cC
Q 019059 193 QFWDLRSMGKTNSIEHAH-----VRNVDYDTKKKHLL------------VTAADESGIHLWDLRMLKAPIQEL-----PG 250 (346)
Q Consensus 193 ~i~d~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~~~-----~~ 250 (346)
++||++++++++++...+ +.+++|+|++. ++ ++|+.|++|++||..+ +..+..+ .+
T Consensus 206 kIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~G 283 (356)
T 2w18_A 206 VIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPG 283 (356)
T ss_dssp EEEETTTCCEEEEEECCC---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTT-TEEEEEEEECCCTT
T ss_pred EEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCC
Confidence 999999999999887332 77889999997 44 5688899999999986 4455443 35
Q ss_pred CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceee-EEEeCCCCCcE
Q 019059 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY-GLAWSSREPWI 329 (346)
Q Consensus 251 ~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~ 329 (346)
|...+.+..++ + .++++++.|++|+|||+.+ ++++.++.+|...+. .++|+|+|+ +
T Consensus 284 h~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~t-------------------Gk~l~tL~gH~~~vvs~vafSPDG~-~ 340 (356)
T 2w18_A 284 QAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLL-------------------GQCTALLPPVSDQHWSFVKWSGTDS-H 340 (356)
T ss_dssp CCCCEEEEEEE--T-TEEEEEETTSCEEEEETTT-------------------CSEEEEECCC--CCCCEEEECSSSS-E
T ss_pred CcceeEccccC--C-CEEEEEcCCCcEEEEECCC-------------------CcEEEEecCCCCCeEEEEEECCCCC-E
Confidence 66555544444 5 7899999999999999999 899999999987655 589999997 9
Q ss_pred EEEeecCCeEEEeeec
Q 019059 330 FASLSYDGRVRNHMLE 345 (346)
Q Consensus 330 l~s~~~d~~v~vw~~~ 345 (346)
|++|+.|++|+|||+.
T Consensus 341 LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 341 LLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EEEECTTSCEEEEEEC
T ss_pred EEEEECCCcEEEecCC
Confidence 9999999999999973
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.6e-32 Score=230.35 Aligned_cols=251 Identities=16% Similarity=0.208 Sum_probs=193.7
Q ss_pred EEeeeeccccceEEeeecCCC---CceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCC
Q 019059 57 ICEGLFSHPNEIWDLSSCPFD---QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGR 133 (346)
Q Consensus 57 ~~~~~~~h~~~v~~~~~~~~~---~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 133 (346)
....+.+|.+.|++++|+|++ +.|+++ +.|+.|++|++.. ........+..|...|.+++|+|+++
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~----~~dg~i~iw~~~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAG----SWANDVRCWEVQD-------SGQTIPKAQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEE----ETTSEEEEEEECT-------TSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEE----CCCCcEEEEEcCC-------CCceeEEEeccccCCEEEEEECcCCC
Confidence 345677899999999999994 666664 6899999999972 11233367889999999999999998
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe--CCCCCcEEEEecCCeEEEEEccCCCccceeeccc-
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW--DPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH- 210 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~- 210 (346)
. +++++.|+.|++||+.+++... . ..|...+.+++| +|++..+++++.|+.|++||+++++....+....
T Consensus 100 ~-l~s~~~dg~v~iwd~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 172 (368)
T 3mmy_A 100 K-VFTASCDKTAKMWDLSSNQAIQ-I-----AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER 172 (368)
T ss_dssp E-EEEEETTSEEEEEETTTTEEEE-E-----EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC
T ss_pred E-EEEEcCCCcEEEEEcCCCCcee-e-----ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC
Confidence 4 7777889999999998764322 1 235668999999 9999999999999999999999999888887444
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec-CCCcceEEEEeCCCC---CcEEEEecCCCeEEEEecCCCC
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEY---DGFILSAGTDSTVNLWLVSTSN 286 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~v~~~~~~---~~~l~s~~~d~~i~iwd~~~~~ 286 (346)
+.++.+.+. .+++++.++.+++||++........+. .+...+.++.+.++. +..+++++.|+.|++||++...
T Consensus 173 ~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 173 CYCADVIYP---MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp EEEEEEETT---EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred ceEEEecCC---eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 777777653 677788889999999987443333332 234455666655544 1239999999999999998710
Q ss_pred CCCCCcccccCCccccccccccccccccc------------eeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 287 HDELPSESLVESPNQRANSLLNSYSDYED------------SVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
....+..+.+|.. .|++++|+|+++ +|++++.|+.|++||++
T Consensus 250 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 250 ----------------PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-TLATVGSDGRFSFWDKD 303 (368)
T ss_dssp ----------------HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-CEEEEETTSCEEEEETT
T ss_pred ----------------ccccceeeeeeecccccccccccccceEEEEEecCCC-EEEEEccCCeEEEEECC
Confidence 0144556666655 799999999997 89999999999999986
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-31 Score=224.70 Aligned_cols=269 Identities=12% Similarity=0.085 Sum_probs=191.7
Q ss_pred CCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCC
Q 019059 26 TDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL 105 (346)
Q Consensus 26 ~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~ 105 (346)
.+...++.| +.++.|++|++.......... ...|.++.|+|. +++ ++.|+.|++|+........
T Consensus 46 ~d~~~l~sg----~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s----~s~D~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 46 YDKWVCMCR----CEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IIS----RGPCNRLLLLYPGNQITIL 109 (343)
T ss_dssp EEEEEEEEE----EETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEE----ECSTTEEEEEETTTEEEEE
T ss_pred CCCCEEEEE----CCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEE----ecCCCeEEEEEccCceEEe
Confidence 355666666 468999999998764322222 467889999997 555 4899999999876211000
Q ss_pred CCccceeeeeee-ccCCceEEEEeec--CCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCc
Q 019059 106 NSPQLERIAALD-AHVGKINCVLWWS--SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182 (346)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 182 (346)
+....+.+..+. .|.+.|.+++|+| +++. +++++.|+.|++||+++++.. .... ..+...+.+++|+|++..
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~-~~~~---~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQY-IVHS---AKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEE-EEEC---CCSSCCCCEEEECTTSCE
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEE-EEEe---cCCCCceEEEEECCCCCE
Confidence 011223233333 6678999999999 8883 677788999999999976542 2111 223447999999999999
Q ss_pred EEEEecCCeEEEEEccCCCcc-ceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC---CCcce
Q 019059 183 AVAATCESSVQFWDLRSMGKT-NSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG---HTHWT 255 (346)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~-~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v 255 (346)
+++++.|+.|++||+++++.. ..+..+| |++++|+|++. +|++++. +.|++||+++.. .+..+.. |...+
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~~-~~v~iwd~~~~~-~~~~~~~~~~~~~~~ 261 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVECD-QTVVCFDLRKDV-GTLAYPTYTIPEFKT 261 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEES-SBEEEEETTSST-TCBSSCCCBC-----
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEeC-CeEEEEEcCCCC-cceeecccccccccc
Confidence 999999999999999999877 5666435 99999999998 8888884 599999999743 4444332 44444
Q ss_pred E--EEEeCCCCCcEEEEecC-CCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC---CCCcE
Q 019059 256 W--AVCCNPEYDGFILSAGT-DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS---REPWI 329 (346)
Q Consensus 256 ~--~v~~~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 329 (346)
. +++|+|++ .+|++++. |+.|+||++.. ....... .++..+.|.| +.. .
T Consensus 262 ~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~-------------------~~~~~~~----~~~~~~~~~~~~~~~~-~ 316 (343)
T 3lrv_A 262 GTVTYDIDDSG-KNMIAYSNESNSLTIYKFDK-------------------KTKNWTK----DEESALCLQSDTADFT-D 316 (343)
T ss_dssp CCEEEEECTTS-SEEEEEETTTTEEEEEEECT-------------------TTCSEEE----EEEEECCC----CCCC-E
T ss_pred cceEEEECCCC-CEEEEecCCCCcEEEEEEcc-------------------cccceEe----cCceeEecCccccccc-e
Confidence 4 69999999 99999888 99999999976 2221111 4577888888 665 7
Q ss_pred EEEeecCCeEEEee
Q 019059 330 FASLSYDGRVRNHM 343 (346)
Q Consensus 330 l~s~~~d~~v~vw~ 343 (346)
+++++.|+.++++-
T Consensus 317 l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 317 MDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEEEETTEEEEEE
T ss_pred eEEEecCCceEEEE
Confidence 88888888888764
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.4e-31 Score=231.48 Aligned_cols=230 Identities=20% Similarity=0.332 Sum_probs=194.0
Q ss_pred eccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEec
Q 019059 62 FSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID 141 (346)
Q Consensus 62 ~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 141 (346)
.+|...|.++++ +++.++++ +.|+.|++||+. +.+.+..+.+|...|.+++| +++ ++++++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g----~~dg~i~iwd~~---------~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~ 191 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSG----LRDNTIKIWDKN---------TLECKRILTGHTGSVLCLQY--DER-VIITGSS 191 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEE----ESSSCEEEEESS---------SCCEEEEECCCSSCEEEEEC--CSS-EEEEEET
T ss_pred cCCCCcEEEEEE--CCCEEEEE----eCCCeEEEEeCC---------CCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcC
Confidence 356678998887 57777775 689999999998 67888889999999999999 455 4777888
Q ss_pred CCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccc--eeeccc---eeEEEe
Q 019059 142 EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN--SIEHAH---VRNVDY 216 (346)
Q Consensus 142 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~---v~~~~~ 216 (346)
||.|++||+.+++....+ .+|...+.+++|++ ..+++++.|+.|++||+++++... ....+| |.+++|
T Consensus 192 dg~i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 264 (435)
T 1p22_A 192 DSTVRVWDVNTGEMLNTL-----IHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF 264 (435)
T ss_dssp TSCEEEEESSSCCEEEEE-----CCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEE-----cCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe
Confidence 999999999877543322 34677899999974 589999999999999999887653 222344 999999
Q ss_pred CCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccccc
Q 019059 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296 (346)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 296 (346)
++. .+++++.||.|++||+++ ..++..+.+|...|.++.|+ + .+|++|+.|+.|++||+++
T Consensus 265 --~~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~------------ 325 (435)
T 1p22_A 265 --DDK-YIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIEC------------ 325 (435)
T ss_dssp --ETT-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTT------------
T ss_pred --CCC-EEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCC------------
Confidence 565 899999999999999997 56888899999999999994 4 7899999999999999998
Q ss_pred CCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++..+.+|...|.+++| ++. +|++++.||.|++||+.
T Consensus 326 -------~~~~~~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 326 -------GACLRVLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp -------CCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHH
T ss_pred -------CCEEEEEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECC
Confidence 8889999999999999999 455 89999999999999974
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-31 Score=246.43 Aligned_cols=251 Identities=16% Similarity=0.294 Sum_probs=201.1
Q ss_pred ccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCC--CCceEEEEeecCC
Q 019059 12 LKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPF--DQRIFSTVFSTGE 89 (346)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~~~~~ 89 (346)
+..+...+.++.+++++..+++|. .++.|.+|++..... .....+.+|.+.|.+++|+|+ +..++++ +.
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~----~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~----s~ 75 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCS----SDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASC----SY 75 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEE----TTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEEE----ET
T ss_pred cccCcceeEEEEECCCCCeEEEEE----CCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEEE----eC
Confidence 344566788889999999898874 578999999985432 344677899999999999987 7777775 68
Q ss_pred cceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
|+.|++||+.. .....+..+..|...|.+++|+|+ +. .+++++.|+.|++||+.+......... .+|
T Consensus 76 Dg~I~vwd~~~-------~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~---~~~ 144 (753)
T 3jro_A 76 DGKVLIWKEEN-------GRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIII---DAH 144 (753)
T ss_dssp TSCEEEEEEET-------TEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEE---ECC
T ss_pred CCeEEEEECCC-------CcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEe---ecC
Confidence 99999999982 122367778889999999999999 66 477778899999999987644333332 246
Q ss_pred ceeeEEEEeCC-------------CCCcEEEEecCCeEEEEEccCCCcc----ceeeccc---eeEEEeCCC---CCcEE
Q 019059 168 LHYLSGGAWDP-------------HDVNAVAATCESSVQFWDLRSMGKT----NSIEHAH---VRNVDYDTK---KKHLL 224 (346)
Q Consensus 168 ~~~v~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~---v~~~~~~~~---~~~~l 224 (346)
...+.+++|+| ++..+++++.||.|++||++++... ..+. +| |.+++|+|+ +. ++
T Consensus 145 ~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~-~l 222 (753)
T 3jro_A 145 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRS-YL 222 (753)
T ss_dssp SSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSE-EE
T ss_pred CCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCC-EE
Confidence 66899999999 5899999999999999999987533 2333 44 999999999 66 89
Q ss_pred EEecCCCeEEEEEcccCCc----ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCC
Q 019059 225 VTAADESGIHLWDLRMLKA----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
++++.||.|++||++.... .......|...|++++|+|++ .+|++++.||.|++||++..
T Consensus 223 ~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSS
T ss_pred EEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCC
Confidence 9999999999999987421 233345688999999999999 99999999999999999853
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.5e-30 Score=224.72 Aligned_cols=249 Identities=19% Similarity=0.270 Sum_probs=200.5
Q ss_pred cccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCc
Q 019059 11 GLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGES 90 (346)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d 90 (346)
.+..+...|.++.+++++..+++|+ .++.|.+|++.... ....+.+|...|.+++++ +..+++ ++.|
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs----~Dg~v~iWd~~~~~---~~~~~~~h~~~v~~~s~~--~~~l~s----gs~d 208 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQK---RLRNMTSHSARVGSLSWN--SYILSS----GSRS 208 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTE---EEEEECCCSSCEEEEEEE--TTEEEE----EETT
T ss_pred EecCCCCcEEEEEECCCCCEEEEEE----CCCeEEEEEcCCCc---EEEEEeCCCCceEEEeeC--CCEEEE----EeCC
Confidence 3444456788899999999999885 67899999987642 346677899999998885 445555 4799
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCcee
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 170 (346)
+.+++|+... ....+..+.+|...+..+.|+|++.. +++++.|+.+++|+..+++...... .....|...
T Consensus 209 ~~i~~~d~~~--------~~~~~~~~~~h~~~~~~~~~~~~g~~-l~s~~~D~~v~i~~~~~~~~~~~~~-~~~~~~~~~ 278 (420)
T 4gga_A 209 GHIHHHDVRV--------AEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPGEGGWVPL-QTFTQHQGA 278 (420)
T ss_dssp SEEEEEETTS--------SSCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCCSSCSCCS-EEECCCSSC
T ss_pred CceeEeeecc--------cceeeEEecccccceeeeeecCCCCe-eeeeeccccceEEeeccccccceee-eeecccCCc
Confidence 9999999873 34566778899999999999999994 6777889999999998765432221 122346678
Q ss_pred eEEEEeCCCCCcEEEE---ecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEE-ecCCCeEEEEEcccCCcce
Q 019059 171 LSGGAWDPHDVNAVAA---TCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT-AADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 171 v~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~ 245 (346)
|.+++|+|.+..+++. +.|+.|++||++++++...+.... +.++.|+|++..++++ |+.|+.|++||+++ ..++
T Consensus 279 V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v 357 (420)
T 4gga_A 279 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKV 357 (420)
T ss_dssp EEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEE
T ss_pred eeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-CcEE
Confidence 9999999988776543 358999999999999888877444 9999999999844433 34789999999997 5689
Q ss_pred eeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 246 ~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
..+.+|...|++++|+|+| .+|+||+.|++|+|||+..
T Consensus 358 ~~l~gH~~~V~~l~~spdg-~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 358 AELKGHTSRVLSLTMSPDG-ATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEECCCSSCEEEEEECTTS-SCEEEEETTTEEEEECCSC
T ss_pred EEEcCCCCCEEEEEEcCCC-CEEEEEecCCeEEEEECCC
Confidence 9999999999999999999 9999999999999999986
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7e-30 Score=222.45 Aligned_cols=244 Identities=14% Similarity=0.125 Sum_probs=180.6
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCC-----ceEEEEeecCCCCcEE
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG-----KINCVLWWSSGRHDKL 137 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~ 137 (346)
.|...|.+++|||+|..|+++ +.||.|++|+.+ . .+..+. |.. .|.+++|+|+|+. ++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~----s~dg~V~iwd~~---------~--~l~~l~-~~~~~~~~sv~svafSPDG~~-LA 145 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVL----SNNGNVSVFKDN---------K--MLTNLD-SKGNLSSRTYHCFEWNPIESS-IV 145 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEE----ETTSCEEEEETT---------E--EEEECC-CSSCSTTTCEEEEEECSSSSC-EE
T ss_pred CCCCcEEEEEECCCCCEEEEE----eCCCcEEEEeCC---------c--eeeecc-CCCccccccEEEEEEcCCCCE-EE
Confidence 567899999999999999986 699999999965 2 556666 665 5999999999995 77
Q ss_pred EEecCCeEEEEEcCCCCC------CceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcc---ceeec
Q 019059 138 VSIDEENIFLWSLDCSNK------NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT---NSIEH 208 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~ 208 (346)
+++.||+|++||+.++.. ..........+|...|.+++|+|++ +++++.|+.+++||+..+... .++..
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 788999999999987542 1122222235678899999999998 888999999999999987743 34533
Q ss_pred cc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEe--CCCCCcEEEEecCCCeEEEEecC
Q 019059 209 AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCC--NPEYDGFILSAGTDSTVNLWLVS 283 (346)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~--~~~~~~~l~s~~~d~~i~iwd~~ 283 (346)
+| |.+++|+ +. .+++++ ++.|++||+.. ........+|...+..++| +|++ ..|+++++||+ ++|...
T Consensus 224 ~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~-~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 224 ASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKES-TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSC-EEEEECSSCEE-EEEESS
T ss_pred cccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCC-CEEEEEcCCCC-EEEeec
Confidence 44 9999999 45 788887 69999999986 4332333389999999999 9999 99999999999 999986
Q ss_pred CCCCCCCC--cccc---cCCccccccccccccccccceeeEEEeCCCCCcEEEEeec
Q 019059 284 TSNHDELP--SESL---VESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (346)
Q Consensus 284 ~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (346)
...-.... .... .... ...+..+..+.+ ...|++++|+|+|+ ++|+++.
T Consensus 297 ~~~~spd~~l~a~~d~~v~lW-~~~g~~l~~~~~-~~~I~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 297 ELHVTADNIIAPYLEKKFKKW-STIWNEFNNYET-TLVIHGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp SEEEECCCSSHHHHHHHHHHT-TTTTTSSSSSCC-EEEEEEEEECTTSS-EEEEEEE
T ss_pred cEEECCCceEEEEcCCEEEEE-ECCCCceeeecc-ceEEEEEEECCCCC-EEEEEEe
Confidence 31100000 0000 0000 012233444444 66799999999997 8887763
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7.1e-29 Score=217.28 Aligned_cols=258 Identities=11% Similarity=0.070 Sum_probs=194.0
Q ss_pred EEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeee-----eeecc
Q 019059 45 HLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIA-----ALDAH 119 (346)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~-----~~~~~ 119 (346)
.+|.++.................+.+++|+| +..++++ ++.++.|++||+. .++... .+..|
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~---~~~~~~i~~~d~~---------~g~~~~~~~~~~~~~~ 168 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIP---LLEDEGMDVLDIN---------SGQTVRLSPPEKYKKK 168 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEE---BTTSSSEEEEETT---------TCCEEEECCCHHHHTT
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEE---eCCCCeEEEEECC---------CCeEeeecCccccccc
Confidence 5555555433222222233445677999999 5555555 4778899999988 444444 45578
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEcc
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLR 198 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 198 (346)
...|.+++|++++. ++++++.|+.|++||+++++....+. .|...+.+++|+|+++.+++++ .++.|++||++
T Consensus 169 ~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 169 LGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAYKATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp CCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCEEEEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceEEEEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 88999999999887 46666789999999998765433332 3445789999999999887666 68999999999
Q ss_pred CCCccceeeccc-eeEEEeCCCCCcEEEEec--------CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEE
Q 019059 199 SMGKTNSIEHAH-VRNVDYDTKKKHLLVTAA--------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 199 ~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~ 269 (346)
+++....+.... +.+++|+|+++ .+++++ .|+.|++||+++ .+.+..+ .|...+.+++|+|++..+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 243 TKLEIRKTDKIGLPRGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYV 319 (433)
T ss_dssp TTEEEEECCCCSEEEEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEE
T ss_pred CCcEEEEecCCCCceEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEE
Confidence 988777666434 99999999998 666665 588999999986 4444444 46678899999999944667
Q ss_pred EecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeec--------------
Q 019059 270 SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY-------------- 335 (346)
Q Consensus 270 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------------- 335 (346)
+++.|+.|++||+.+ ++.+..+. +...+.+++|+|+++ ++++++.
T Consensus 320 ~~~~~~~v~v~d~~~-------------------~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 320 SDMCCSKIEVYDLKE-------------------KKVQKSIP-VFDKPNTIALSPDGK-YLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp EETTTTEEEEEETTT-------------------TEEEEEEE-CSSSEEEEEECTTSS-EEEEEECCCCCTTTCTTSCCS
T ss_pred EecCCCEEEEEECCC-------------------CcEEEEec-CCCCCCeEEEcCCCC-EEEEEecCCCccccccccccc
Confidence 779999999999997 66666654 556689999999997 5666654
Q ss_pred -CCeEEEeeec
Q 019059 336 -DGRVRNHMLE 345 (346)
Q Consensus 336 -d~~v~vw~~~ 345 (346)
||.|++||++
T Consensus 379 ~dg~v~~~d~~ 389 (433)
T 3bws_A 379 VLGKVYVIDTT 389 (433)
T ss_dssp SCCEEEEEETT
T ss_pred cceEEEEEECC
Confidence 5799999975
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.6e-29 Score=207.29 Aligned_cols=253 Identities=13% Similarity=0.089 Sum_probs=169.4
Q ss_pred eeeecccceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCC----CCeEEEeeeeccccceEEeeecCCCCceEE
Q 019059 7 GIGYGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSG----GTELICEGLFSHPNEIWDLSSCPFDQRIFS 82 (346)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 82 (346)
.++|.......++..+.+.++..-+++-...--+-+.+..+-++++ +..+.. .+|...|.++ +++ +++.
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s---~g~~~~v~~l---~~g-~lv~ 149 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK---SGNIKAVLGL---TKR-RLVS 149 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEE---EEEEEEEEEE---TTT-EEEE
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEe---CCCeEEEEec---CCC-cEEE
Confidence 3556666555566666666655555444333334455666666655 333322 2344455544 333 3333
Q ss_pred EEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeec---CCCCcEEEEecCCeEEEEEcCCCCCCcee
Q 019059 83 TVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWS---SGRHDKLVSIDEENIFLWSLDCSNKNAQV 159 (346)
Q Consensus 83 ~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 159 (346)
+. ..+.|+.|++|++.. .++.+..+..|...+..++|++ ++. ++++++.|++|+|||+.+++....+
T Consensus 150 ss-~~g~d~~V~~~~~s~--------dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 150 SS-GTLSDQQVEVMTFAE--------DGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp EE-SSSTTCEEEEEEECT--------TSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ec-ccCCCCcEEEEEECC--------CCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcEEEEE
Confidence 31 134699999999952 5777788889999999999998 445 3566689999999999988755554
Q ss_pred eecccCCCceeeEEEEeCCCCCcE------------EEEecCCeEEEEEccCCCcccee----eccc---eeEEEeCCCC
Q 019059 160 QSKQSSGMLHYLSGGAWDPHDVNA------------VAATCESSVQFWDLRSMGKTNSI----EHAH---VRNVDYDTKK 220 (346)
Q Consensus 160 ~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~----~~~~---v~~~~~~~~~ 220 (346)
... ..+...+.+++|+|++..+ ++++.|++|++||..+++.+..+ ..+| +.+..++ +
T Consensus 220 ~g~--~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g 295 (356)
T 2w18_A 220 HID--DSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--D 295 (356)
T ss_dssp ECC--C---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--T
T ss_pred cCC--CcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--C
Confidence 321 1223467888999999876 45667899999999998876544 2344 3333333 5
Q ss_pred CcEEEEecCCCeEEEEEcccCCcceeeecCCCcceE-EEEeCCCCCcEEEEecCCCeEEEEecC
Q 019059 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTW-AVCCNPEYDGFILSAGTDSTVNLWLVS 283 (346)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~v~~~~~~~~~l~s~~~d~~i~iwd~~ 283 (346)
. ++++++.|++|+|||+++ ++.+.++.+|...+. +++|+|+| .+|++|+.|++|+|||+.
T Consensus 296 ~-~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 296 H-CAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp T-EEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEEC
T ss_pred C-EEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecCC
Confidence 5 799999999999999998 668899999987665 58999999 999999999999999963
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.4e-27 Score=206.22 Aligned_cols=236 Identities=9% Similarity=0.045 Sum_probs=180.3
Q ss_pred eeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEec
Q 019059 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (346)
+..+.+++++..++++. ..++.+.+|++...+ . ...+ .+...+.+++|+|++++++++ +..++.|++||+
T Consensus 34 ~~~~~~s~dg~~l~~~~---~~d~~i~v~d~~~~~--~-~~~~-~~~~~v~~~~~spdg~~l~~~---~~~~~~v~v~d~ 103 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVAN---AHSNDVSIIDTATNN--V-IATV-PAGSSPQGVAVSPDGKQVYVT---NMASSTLSVIDT 103 (391)
T ss_dssp EEEEEECTTSSEEEEEE---GGGTEEEEEETTTTE--E-EEEE-ECSSSEEEEEECTTSSEEEEE---ETTTTEEEEEET
T ss_pred cceEEECCCCCEEEEEC---CCCCeEEEEECCCCe--E-EEEE-ECCCCccceEECCCCCEEEEE---ECCCCEEEEEEC
Confidence 45566778887765432 246789999886532 2 2233 344499999999999988776 367799999999
Q ss_pred CcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC
Q 019059 99 PELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP 178 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 178 (346)
. ..+.+..+.. ...+.+++|+|+++.++++++.++.|++||+.+++....+.. ...+..++|+|
T Consensus 104 ~---------~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~ 167 (391)
T 1l0q_A 104 T---------SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV------GRSPKGIAVTP 167 (391)
T ss_dssp T---------TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------CSSEEEEEECT
T ss_pred C---------CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec------CCCcceEEECC
Confidence 8 5666666654 456899999999997556777799999999987654333221 12568999999
Q ss_pred CCCcEE-EEecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEec---CCCeEEEEEcccCCcceeeecCCCc
Q 019059 179 HDVNAV-AATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAA---DESGIHLWDLRMLKAPIQELPGHTH 253 (346)
Q Consensus 179 ~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (346)
+++.++ +++.++.|++||+++++....+.... +.+++|+|+++ .+++++ .++.|++||+++ .+++..+..|.
T Consensus 168 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~- 244 (391)
T 1l0q_A 168 DGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGT-KAYVTNVDKYFNTVSMIDTGT-NKITARIPVGP- 244 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSS-EEEEEEECSSCCEEEEEETTT-TEEEEEEECCS-
T ss_pred CCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCC-EEEEEecCcCCCcEEEEECCC-CeEEEEEecCC-
Confidence 999885 55678999999999988777766444 99999999998 555555 689999999987 55677777654
Q ss_pred ceEEEEeCCCCCcEE-EEecCCCeEEEEecCC
Q 019059 254 WTWAVCCNPEYDGFI-LSAGTDSTVNLWLVST 284 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l-~s~~~d~~i~iwd~~~ 284 (346)
.+.+++|+|++ .+| ++++.|+.|++||+.+
T Consensus 245 ~~~~~~~s~dg-~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 245 DPAGIAVTPDG-KKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp SEEEEEECTTS-SEEEEEETTTTEEEEEETTT
T ss_pred CccEEEEccCC-CEEEEEcCCCCEEEEEECCC
Confidence 57899999999 655 7778999999999997
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.1e-29 Score=217.70 Aligned_cols=229 Identities=17% Similarity=0.120 Sum_probs=165.0
Q ss_pred CCCCeEEEEEecCCCCe--EEEeeeeccccceEEeeecC--------CCCceEEEEeecCCcceEEEEecCcccCCCCCc
Q 019059 39 KEENEVHLLRLSSGGTE--LICEGLFSHPNEIWDLSSCP--------FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~--------~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (346)
..++.+++|+....... .....+.+|.+.|++++|+| +++.|+++ +.|++|+|||+.
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~----s~D~tv~~Wd~~--------- 174 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV----GDDCTLIIWRLT--------- 174 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE----ETTSEEEEEEEE---------
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE----ECCCeEEEEECC---------
Confidence 46889999998875322 12345779999999999998 56666664 799999999997
Q ss_pred cceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeee--------------------cccCCCc
Q 019059 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS--------------------KQSSGML 168 (346)
Q Consensus 109 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~--------------------~~~~~~~ 168 (346)
...++..+..|...|.+++|+|++..++++++.|+.|++||+.+++....... ....+|.
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 254 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA 254 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCS
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccc
Confidence 55666777789999999999999876678888999999999987654322211 1123566
Q ss_pred eeeEEEEeC-CCCCcEEEEecCCeEEEEEccCCCccceeeccc---------------------eeEEEeCCCCCcEEEE
Q 019059 169 HYLSGGAWD-PHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---------------------VRNVDYDTKKKHLLVT 226 (346)
Q Consensus 169 ~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------------v~~~~~~~~~~~~l~~ 226 (346)
..+.++.|. |+++.+++++.|+.+++||+..++....+.... +..+.+.+.+..++++
T Consensus 255 ~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 255 SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 678888886 789999999999999999998776544332110 2222333334446778
Q ss_pred ecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecC
Q 019059 227 AADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVS 283 (346)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~ 283 (346)
|+.||.|++||+.+ ..+...+..|..+|.+++|+|+| ++||+++.|| +.+|.+.
T Consensus 335 gs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 335 HSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEG
T ss_pred ECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEe
Confidence 88999999999987 45666777889999999999999 9999999776 6666654
No 126
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.2e-27 Score=200.54 Aligned_cols=247 Identities=19% Similarity=0.265 Sum_probs=195.1
Q ss_pred cceeeEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcce
Q 019059 13 KYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG 92 (346)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~ 92 (346)
..+...+.++.+++++..++.|+ .++.+.+|++...+ ....+.+|...+.++.+. +..++++ +.++.
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs----~Dg~v~iw~~~~~~---~~~~~~~h~~~~~~~~~~--~~~l~s~----~~~~~ 130 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGT----SSAEVQLWDVQQQK---RLRNMTSHSARVGSLSWN--SYILSSG----SRSGH 130 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEE----TTSEEEEEETTTTE---EEEEEECCSSCEEEEEEE--TTEEEEE----ETTSE
T ss_pred cCCCCeEEEEEECCCCCEEEEEE----CCCcEEEeecCCce---eEEEecCccceEEEeecC--CCEEEEE----ecCCc
Confidence 33455678888899998888874 67899999887642 345677899888876664 4555553 68899
Q ss_pred EEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeE
Q 019059 93 AAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (346)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (346)
+++|+... ....+..+.+|...+..+.++++++. +++++.|+.|++||+.+++....... ....+...+.
T Consensus 131 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~v~ 200 (318)
T 4ggc_A 131 IHHHDVRV--------AEHHVATLSGHSQEVCGLRWAPDGRH-LASGGNDNLVNVWPSAPGEGGWVPLQ-TFTQHQGAVK 200 (318)
T ss_dssp EEEEETTS--------SSCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEESSCBTTBSCCSE-EECCCCSCEE
T ss_pred eEeeecCC--------CceeEEEEcCccCceEEEEEcCCCCE-EEEEecCcceeEEECCCCccccccee-eecccCCceE
Confidence 99999873 34566778899999999999999984 77778899999999987654332222 2234556899
Q ss_pred EEEeCCCCCcEE---EEecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEE-ecCCCeEEEEEcccCCcceee
Q 019059 173 GGAWDPHDVNAV---AATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT-AADESGIHLWDLRMLKAPIQE 247 (346)
Q Consensus 173 ~~~~~~~~~~l~---~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~ 247 (346)
.++++|++..++ +++.++.|++||.+............ +..+.|+|++..++++ |+.|+.|++||+++ .+++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~ 279 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAE 279 (318)
T ss_dssp EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEE
T ss_pred EEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-CcEEEE
Confidence 999999887765 33468999999999888776665444 9999999999844433 45799999999998 668999
Q ss_pred ecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 248 LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 248 ~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+.+|...|++++|+|++ .+|++|+.|++|+|||+..
T Consensus 280 l~gH~~~V~~l~~spdg-~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 280 LKGHTSRVLSLTMSPDG-ATVASAAADETLRLWRCFE 315 (318)
T ss_dssp ECCCSSCEEEEEECTTS-SCEEEEETTTEEEEECCSC
T ss_pred EcCCCCCEEEEEEcCCC-CEEEEEecCCeEEEEECCC
Confidence 99999999999999999 9999999999999999976
No 127
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=8.4e-27 Score=198.16 Aligned_cols=290 Identities=12% Similarity=0.089 Sum_probs=199.8
Q ss_pred ceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCc
Q 019059 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSP 108 (346)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~ 108 (346)
+++++|++....+..+++|.++.....+.......+...+..++|+|+++ |+++.. .+.++.|.+|+++ ..
T Consensus 3 ~~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~-~~~~~~v~~~~~~-------~g 73 (347)
T 3hfq_A 3 ERILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDK-EDDEGGIAAWQID-------GQ 73 (347)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEE-ETTEEEEEEEEEE-------TT
T ss_pred cEEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEe-cCCCceEEEEEec-------CC
Confidence 57888988877788999999998777666555566777888999999998 666531 1347899999996 12
Q ss_pred cceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCC-------CceeeEEEEeCCCCC
Q 019059 109 QLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSG-------MLHYLSGGAWDPHDV 181 (346)
Q Consensus 109 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~ 181 (346)
..+.+..+..+...+..++|+|+++.+++++..++.|.+|++........+......+ ....+.+++|+|+++
T Consensus 74 ~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 74 TAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred cEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 3345555556777889999999999644444468999999996433222222111111 122478899999999
Q ss_pred cEEEEe-cCCeEEEEEcc-CCCccc--eee--ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccC-Cc--ceeeecCC
Q 019059 182 NAVAAT-CESSVQFWDLR-SMGKTN--SIE--HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML-KA--PIQELPGH 251 (346)
Q Consensus 182 ~l~~~~-~d~~i~i~d~~-~~~~~~--~~~--~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~--~~~~~~~~ 251 (346)
++++. .++.|++||+. +++... .+. .+. +..++|+|++++++++...++.|.+|++... .. .+..+...
T Consensus 154 -l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~ 232 (347)
T 3hfq_A 154 -LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTI 232 (347)
T ss_dssp -EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESS
T ss_pred -EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeec
Confidence 55544 57899999998 443221 111 222 8889999999866666778899999998742 21 12222222
Q ss_pred C------cceEEEEeCCCCCcEE-EEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC
Q 019059 252 T------HWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (346)
Q Consensus 252 ~------~~v~~v~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (346)
. ..+..++|+|+| ++| ++...++.|.+|++... ...+.+..+..+...+..++|+|
T Consensus 233 ~~~~~~~~~~~~i~~spdG-~~l~v~~~~~~~v~v~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 233 PADYTAHNGAAAIRLSHDG-HFLYVSNRGYNTLAVFAVTAD----------------GHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp CTTCCSCCEEEEEEECTTS-CEEEEEEETTTEEEEEEECGG----------------GCEEEEEEEECSSSCCCEEEECT
T ss_pred CCCCCCCCcceeEEECCCC-CEEEEEeCCCCEEEEEEECCC----------------CcEEEeEEEecCCCCcCeEEECC
Confidence 2 458889999999 766 56667899999999740 00244445555556689999999
Q ss_pred CCCcEEEEeecCCeEEEeeec
Q 019059 325 REPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 325 ~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++++++++...++.|.+|+++
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEcCCCcEEEEEEe
Confidence 998444444456999999653
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.8e-27 Score=206.81 Aligned_cols=277 Identities=11% Similarity=0.058 Sum_probs=196.5
Q ss_pred CCcceE-EEeecccCCCC----eEEEEEe--cCCCCeEEEeeeeccccceEEeeecC--------------CCCceEEEE
Q 019059 26 TDHTSF-LTGTLSLKEEN----EVHLLRL--SSGGTELICEGLFSHPNEIWDLSSCP--------------FDQRIFSTV 84 (346)
Q Consensus 26 ~~~~~~-~~g~~~~~~~~----~i~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~--------------~~~~l~~~~ 84 (346)
+.+..+ +.|......++ .+++|++ ... ..+....+.+|...+..+++++ .+..++.+.
T Consensus 72 ~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s 150 (415)
T 2hqs_A 72 ALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG-TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 150 (415)
T ss_dssp TTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTT-CEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEE
T ss_pred hcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCC-CEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEE
Confidence 344444 46766545566 8899998 554 3444566788998888888875 256666654
Q ss_pred eecCCc--ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC---CeEEEEEcCCCCCCcee
Q 019059 85 FSTGES--YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE---ENIFLWSLDCSNKNAQV 159 (346)
Q Consensus 85 ~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d---~~i~vwd~~~~~~~~~~ 159 (346)
...+.+ +.|++||++ ......+..|...+.+++|+|+|+. ++.++.+ ..|++||+.+++.. .+
T Consensus 151 ~~~~~~~~~~i~i~d~~----------g~~~~~l~~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 151 QTNGGQFPYELRVSDYD----------GYNQFVVHRSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp ECSSSSCCEEEEEEETT----------SCSCEEEEEESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred ecCCCCccceEEEEcCC----------CCCCEEEeCCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 221111 799999986 2345667789999999999999996 4444445 49999999876532 22
Q ss_pred eecccCCCceeeEEEEeCCCCCcEE-EEecCC--eEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecC-CC--e
Q 019059 160 QSKQSSGMLHYLSGGAWDPHDVNAV-AATCES--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAAD-ES--G 232 (346)
Q Consensus 160 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~-dg--~ 232 (346)
. .+...+.+++|+|+++.|+ +++.++ .|++||+++++......... +.+++|+|+++ .|++++. ++ .
T Consensus 219 ~-----~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~~ 292 (415)
T 2hqs_A 219 A-----SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQ 292 (415)
T ss_dssp E-----CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSS-EEEEEECTTSSCE
T ss_pred e-----cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCC-EEEEEECCCCCcE
Confidence 1 2344789999999999888 444444 59999999877533222222 99999999998 5555554 55 6
Q ss_pred EEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCC---CeEEEEecCCCCCCCCCcccccCCccccccccccc
Q 019059 233 IHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSLLNS 309 (346)
Q Consensus 233 i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (346)
|++||+.. . ....+..+...+.+++|+|+| ++|++++.+ ..|++||+.+ ++. ..
T Consensus 293 i~~~d~~~-~-~~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~~d~~~-------------------~~~-~~ 349 (415)
T 2hqs_A 293 VYKVNING-G-APQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAKQDLAT-------------------GGV-QV 349 (415)
T ss_dssp EEEEETTS-S-CCEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEEEETTT-------------------CCE-EE
T ss_pred EEEEECCC-C-CEEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEEEEECCC-------------------CCE-EE
Confidence 77778875 3 345566677889999999999 888877764 5899999987 444 34
Q ss_pred cccccceeeEEEeCCCCCcEEEEeecCC---eEEEeeecC
Q 019059 310 YSDYEDSVYGLAWSSREPWIFASLSYDG---RVRNHMLEK 346 (346)
Q Consensus 310 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~---~v~vw~~~~ 346 (346)
+..+. .+.+++|+|+++ +|++++.++ .|++|++++
T Consensus 350 l~~~~-~~~~~~~spdg~-~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 350 LSSTF-LDETPSLAPNGT-MVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp CCCSS-SCEEEEECTTSS-EEEEEEEETTEEEEEEEETTS
T ss_pred ecCCC-CcCCeEEcCCCC-EEEEEEcCCCccEEEEEECCC
Confidence 55554 689999999998 677777666 799998753
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=2e-26 Score=195.17 Aligned_cols=277 Identities=12% Similarity=0.151 Sum_probs=187.0
Q ss_pred CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec
Q 019059 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (346)
..++.+.+|++...+. ........|...+.+++|+|+++.++++. ..++.|.+|+++.. ....+.+..+..
T Consensus 12 ~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~---~~~~~v~~~~~~~~-----~~~~~~~~~~~~ 82 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGA-LTLTQVVDVPGQVQPMVVSPDKRYLYVGV---RPEFRVLAYRIAPD-----DGALTFAAESAL 82 (343)
T ss_dssp GGGTEEEEEEECTTSC-EEEEEEEECSSCCCCEEECTTSSEEEEEE---TTTTEEEEEEECTT-----TCCEEEEEEEEC
T ss_pred CCCCeEEEEEECCCCc-EEEeeeEecCCCCceEEECCCCCEEEEee---cCCCeEEEEEecCC-----CCceeecccccc
Confidence 3578999999976333 23334456788899999999999888863 44489999998621 112334445544
Q ss_pred cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEc
Q 019059 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDL 197 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~ 197 (346)
+. .+..++|+|+++.+++++..++.|.+||+..+. ........ . ....+.+++|+|+++.+++++ .++.|++||+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-PVGVVDVV-E-GLDGCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-EEEEEEEE-C-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-cccccccc-c-CCCCceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 44 789999999999644454558999999995221 11111111 1 122578899999999888887 7899999999
Q ss_pred cC-CCccc----eee--ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcc---eeeec---CC---CcceEEEEe
Q 019059 198 RS-MGKTN----SIE--HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELP---GH---THWTWAVCC 260 (346)
Q Consensus 198 ~~-~~~~~----~~~--~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~---~~---~~~v~~v~~ 260 (346)
.+ ++... .+. .+. +..++|+|+++++++++..++.|.+||+...... ...+. .. ...+..++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 87 54322 122 222 8899999999855666668899999999631211 22222 11 235668999
Q ss_pred CCCCCcEEE-EecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeE
Q 019059 261 NPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV 339 (346)
Q Consensus 261 ~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v 339 (346)
+|++ .+|+ +...++.|.+||+.... ...+.+..+..+.. +.+++|+|+++.+++++..++.|
T Consensus 239 s~dg-~~l~v~~~~~~~i~v~d~~~~~---------------~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v 301 (343)
T 1ri6_A 239 TPDG-RHLYACDRTASLITVFSVSEDG---------------SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHI 301 (343)
T ss_dssp CTTS-SEEEEEETTTTEEEEEEECTTS---------------CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEE
T ss_pred CCCC-CEEEEEecCCCEEEEEEEcCCC---------------CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeE
Confidence 9999 6555 66679999999998300 00234444444444 88999999998444444478999
Q ss_pred EEeeec
Q 019059 340 RNHMLE 345 (346)
Q Consensus 340 ~vw~~~ 345 (346)
.+|+++
T Consensus 302 ~v~~~d 307 (343)
T 1ri6_A 302 SVYEIV 307 (343)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999764
No 130
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.95 E-value=4.4e-25 Score=188.57 Aligned_cols=295 Identities=7% Similarity=0.053 Sum_probs=196.0
Q ss_pred CCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCC
Q 019059 25 DTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQ 104 (346)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~ 104 (346)
.+....+++|+++.+.++.+++|.++.....+...... +...+..++|+|+++.|+++...+..++.|.+|+++..
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~--- 85 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE--- 85 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT---
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC---
Confidence 33567889999988888999999998876655554444 77888899999999988887421113479999998721
Q ss_pred CCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeee---ccc------CCCceeeEEEE
Q 019059 105 LNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS---KQS------SGMLHYLSGGA 175 (346)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~---~~~------~~~~~~v~~~~ 175 (346)
....+.+.....+......+++ +++.++++...++.|.+|++........... ... ..+...+.+++
T Consensus 86 --~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 161 (361)
T 3scy_A 86 --KGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVR 161 (361)
T ss_dssp --TTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEE
T ss_pred --CCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEE
Confidence 0123444445445566777777 7775444445689999999975443322211 000 01122457899
Q ss_pred eCCCCCcEEEEec-CCeEEEEEccCCCc------c------ce--eeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcc
Q 019059 176 WDPHDVNAVAATC-ESSVQFWDLRSMGK------T------NS--IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (346)
Q Consensus 176 ~~~~~~~l~~~~~-d~~i~i~d~~~~~~------~------~~--~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (346)
|+|+++.+++++. ++.|.+|++..... + .. ...+. +..++|+|+++.++++...++.|.+||+.
T Consensus 162 ~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 162 ITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec
Confidence 9999998777664 78999999885542 1 11 11122 88999999998444555578999999998
Q ss_pred cCCcc--eeee---cCCCcceEEEEeCCCCCcEEEEecC--CCeEEEEecCCCCCCCCCcccccCCcccccccccccccc
Q 019059 240 MLKAP--IQEL---PGHTHWTWAVCCNPEYDGFILSAGT--DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD 312 (346)
Q Consensus 240 ~~~~~--~~~~---~~~~~~v~~v~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (346)
. ... +..+ ..+......++|+|+| ++|+++.. ++.|.+|++..... ..+.+..+..
T Consensus 242 ~-g~~~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~i~v~~~~~~~g---------------~~~~~~~~~~ 304 (361)
T 3scy_A 242 D-GMLDEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADGVAIFKVDETNG---------------TLTKVGYQLT 304 (361)
T ss_dssp T-TEEEEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCEEEEEEECTTTC---------------CEEEEEEEEC
T ss_pred C-CceEEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCCEEEEEEEcCCCC---------------cEEEeeEecC
Confidence 5 322 2222 2334557899999999 77766554 58999999963000 0123333333
Q ss_pred ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 313 YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 313 ~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
...+.+++|+|++++++++...++.|.+|.++
T Consensus 305 -g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 305 -GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp -SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred -CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 34578999999998444444478999998664
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.2e-25 Score=195.29 Aligned_cols=254 Identities=12% Similarity=0.086 Sum_probs=185.5
Q ss_pred cceEEEeecccCCC--CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCC
Q 019059 28 HTSFLTGTLSLKEE--NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL 105 (346)
Q Consensus 28 ~~~~~~g~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~ 105 (346)
..+++........+ +.|++|++.... ...+.+|...|.+++|+|+++.|+++... +.+..|++||+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----~~~l~~~~~~v~~~~~Spdg~~la~~s~~-~~~~~i~~~d~~------ 211 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----QFVVHRSPQPLMSPAWSPDGSKLAYVTFE-SGRSALVIQTLA------ 211 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----CEEEEEESSCEEEEEECTTSSEEEEEECT-TSSCEEEEEETT------
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----CEEEeCCCCcceeeEEcCCCCEEEEEEec-CCCcEEEEEECC------
Confidence 44566554332211 689999886432 24556789999999999999999887411 112589999998
Q ss_pred CCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC--eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcE
Q 019059 106 NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA 183 (346)
Q Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 183 (346)
.++.. .+..|...+.+++|+|+|+.++++++.++ .|++||+.+++. ..+ ..+...+.+++|+|+++.|
T Consensus 212 ---tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l-----~~~~~~~~~~~~spdg~~l 281 (415)
T 2hqs_A 212 ---NGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQV-----TDGRSNNTEPTWFPDSQNL 281 (415)
T ss_dssp ---TCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEC-----CCCSSCEEEEEECTTSSEE
T ss_pred ---CCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeC-----cCCCCcccceEECCCCCEE
Confidence 44443 56678889999999999997555665554 599999986542 111 2344578999999999999
Q ss_pred EEEec-CC--eEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCC---CeEEEEEcccCCcceeeecCCCcceE
Q 019059 184 VAATC-ES--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKAPIQELPGHTHWTW 256 (346)
Q Consensus 184 ~~~~~-d~--~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~ 256 (346)
++++. ++ .|++||+.+++.......+. +.+++|+|+++ .|++++.+ ..|++||+.. .. ...+..+. .+.
T Consensus 282 ~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~-~~-~~~l~~~~-~~~ 357 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLAT-GG-VQVLSSTF-LDE 357 (415)
T ss_dssp EEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTT-CC-EEECCCSS-SCE
T ss_pred EEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCC-CC-EEEecCCC-CcC
Confidence 88886 44 68888998876433222233 88999999999 55555543 5899999986 32 34565554 899
Q ss_pred EEEeCCCCCcEEEEecCCC---eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCC
Q 019059 257 AVCCNPEYDGFILSAGTDS---TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREP 327 (346)
Q Consensus 257 ~v~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 327 (346)
+++|+|+| ++|++++.|+ .|++||+.. .....+..|.+.|.+++|+|...
T Consensus 358 ~~~~spdg-~~l~~~s~~~~~~~l~~~d~~g--------------------~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 358 TPSLAPNG-TMVIYSSSQGMGSVLNLVSTDG--------------------RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEECTTS-SEEEEEEEETTEEEEEEEETTS--------------------CCEEECCCSSSEEEEEEECCCCC
T ss_pred CeEEcCCC-CEEEEEEcCCCccEEEEEECCC--------------------CcEEEeeCCCCCCcCCccccccc
Confidence 99999999 8888887776 799999875 56777888999999999999653
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=3.1e-25 Score=187.19 Aligned_cols=274 Identities=8% Similarity=0.037 Sum_probs=187.6
Q ss_pred CCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCC
Q 019059 25 DTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQ 104 (346)
Q Consensus 25 ~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~ 104 (346)
.++..++++.. ..++.|.+|+....+ +. ..+..+...+ .++|+|+++.++++. ..++.|.+||+.
T Consensus 6 ~~~~~~~~v~~---~~~~~v~~~d~~~~~--~~-~~~~~~~~~~-~~~~s~dg~~l~~~~---~~~~~i~~~d~~----- 70 (331)
T 3u4y_A 6 QTTSNFGIVVE---QHLRRISFFSTDTLE--IL-NQITLGYDFV-DTAITSDCSNVVVTS---DFCQTLVQIETQ----- 70 (331)
T ss_dssp -CCCCEEEEEE---GGGTEEEEEETTTCC--EE-EEEECCCCEE-EEEECSSSCEEEEEE---STTCEEEEEECS-----
T ss_pred cCCCCEEEEEe---cCCCeEEEEeCcccc--ee-eeEEccCCcc-eEEEcCCCCEEEEEe---CCCCeEEEEECC-----
Confidence 33444544432 346789999876543 22 2223345556 999999999888763 557799999997
Q ss_pred CCCcccee-eeeeeccCCceEEEEeecCCCCcEEEEecC-C--eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCC
Q 019059 105 LNSPQLER-IAALDAHVGKINCVLWWSSGRHDKLVSIDE-E--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHD 180 (346)
Q Consensus 105 ~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 180 (346)
..+. ...+..+..+..+++|+|++++ ++++..+ + .|.+||+.+++....+.. .....+++|+|++
T Consensus 71 ----~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~spdg 139 (331)
T 3u4y_A 71 ----LEPPKVVAIQEGQSSMADVDITPDDQF-AVTVTGLNHPFNMQSYSFLKNKFISTIPI------PYDAVGIAISPNG 139 (331)
T ss_dssp ----SSSCEEEEEEECSSCCCCEEECTTSSE-EEECCCSSSSCEEEEEETTTTEEEEEEEC------CTTEEEEEECTTS
T ss_pred ----CCceeEEecccCCCCccceEECCCCCE-EEEecCCCCcccEEEEECCCCCeEEEEEC------CCCccceEECCCC
Confidence 4444 5666666666666999999996 4444434 3 999999987654332221 1145899999999
Q ss_pred CcEEEEec-CCe-EEEEEccCCCccc-----eeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcc---eeeec
Q 019059 181 VNAVAATC-ESS-VQFWDLRSMGKTN-----SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELP 249 (346)
Q Consensus 181 ~~l~~~~~-d~~-i~i~d~~~~~~~~-----~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~ 249 (346)
+.+++++. ++. |.+|++.....+. .+..+. +..++|+|+++++++++..++.|++||+.. ... +..+.
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~ 218 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVG 218 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEE
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-Ccccceeeecc
Confidence 98777654 577 9999998654332 222223 899999999986667777889999999986 445 55565
Q ss_pred CCCcceEEEEeCCCCCcEEE-EecCCCeEEEEecCCCCCCCCCcccccCCcccccccc--cccccc----ccc---eeeE
Q 019059 250 GHTHWTWAVCCNPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSD----YED---SVYG 319 (346)
Q Consensus 250 ~~~~~v~~v~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~---~v~~ 319 (346)
. ...+..++|+|+| ++|+ +...++.|.+||+.+ ++. +..+.. +.. ....
T Consensus 219 ~-~~~~~~~~~spdg-~~l~v~~~~~~~i~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (331)
T 3u4y_A 219 T-NNLPGTIVVSRDG-STVYVLTESTVDVFNFNQLS-------------------GTLSFVKSFGHGLLIDPRPLFGANQ 277 (331)
T ss_dssp C-SSCCCCEEECTTS-SEEEEECSSEEEEEEEETTT-------------------TEEEEEEEEECCCCCCCGGGTTCCC
T ss_pred C-CCCCceEEECCCC-CEEEEEEcCCCEEEEEECCC-------------------CceeeecccccccccCCCCcccccc
Confidence 3 4667899999999 7554 445578999999987 333 111111 111 1356
Q ss_pred EEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 320 LAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 320 ~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
++|+|+++.+++++..++.|.+|++++
T Consensus 278 ~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 278 MALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred eEECCCCCEEEEecCCCCcEEEEEecC
Confidence 899999985666777788999999863
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=6.6e-26 Score=187.75 Aligned_cols=253 Identities=10% Similarity=0.119 Sum_probs=179.4
Q ss_pred CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCcc-ceeeeeee
Q 019059 39 KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQ-LERIAALD 117 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~~~~~ 117 (346)
..++.+++|++.... ...+..|...|.+++|+|+++.++++ .++.|.+||+. . .+......
T Consensus 19 ~~~~~i~~~d~~~~~----~~~~~~~~~~v~~~~~spdg~~l~~~-----~~~~i~~~d~~---------~~~~~~~~~~ 80 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK----MRVVWQTPELFEAPNWSPDGKYLLLN-----SEGLLYRLSLA---------GDPSPEKVDT 80 (297)
T ss_dssp CCCEEEEEEETTTTE----EEEEEEESSCCEEEEECTTSSEEEEE-----ETTEEEEEESS---------SCCSCEECCC
T ss_pred CcceeEEEEeCCCCc----eeeeccCCcceEeeEECCCCCEEEEE-----cCCeEEEEeCC---------CCCCceEecc
Confidence 356788888876542 23456689999999999999988875 46799999998 4 44444444
Q ss_pred cc-CCceEEEEeecCCCCcEEEEe--cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEE-EEecCCeEE
Q 019059 118 AH-VGKINCVLWWSSGRHDKLVSI--DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV-AATCESSVQ 193 (346)
Q Consensus 118 ~~-~~~i~~~~~~~~~~~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~ 193 (346)
.+ ...+.+++|+|+++. +++++ .++...+|.++........... ...+..++|+|+++.++ ++..++.++
T Consensus 81 ~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 81 GFATICNNDHGISPDGAL-YAISDKVEFGKSAIYLLPSTGGTPRLMTK-----NLPSYWHGWSPDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp TTCCCBCSCCEECTTSSE-EEEEECTTTSSCEEEEEETTCCCCEECCS-----SSSEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ccccccccceEECCCCCE-EEEEEeCCCCcceEEEEECCCCceEEeec-----CCCccceEECCCCCEEEEEECCCCceE
Confidence 55 467899999999995 44444 3345555555422212222111 11478889999999887 566789999
Q ss_pred EEEccCC-Cccceeecc-c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEE
Q 019059 194 FWDLRSM-GKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILS 270 (346)
Q Consensus 194 i~d~~~~-~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s 270 (346)
+|+++.. .....+... . +.+++|+|+++.+++++..++.+++|+++.....+..+..|...+..++|+|++ .+|++
T Consensus 155 l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~ 233 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG-DKVVF 233 (297)
T ss_dssp EEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS-SEEEE
T ss_pred EEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC-CEEEE
Confidence 9986532 222333322 2 999999999984444555689999999874455677788888899999999999 88887
Q ss_pred ecCC-----------CeEEEEecCCCCCCCCCcccccCCcccccccc--ccccccccceeeEEEeCCCCCcEEEEeecC
Q 019059 271 AGTD-----------STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSREPWIFASLSYD 336 (346)
Q Consensus 271 ~~~d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 336 (346)
++.+ +.|.+||+.. ++. +..+.+|...+.+++|+|+++ .|++++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 292 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDG-------------------GNVETLFDLFGGQGTMNSPNWSPDGD-EFAYVRYF 292 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTS-------------------CSCEEEEEEEESTTTSCSCCBCTTSS-EEEEEEEC
T ss_pred EEcCCCCCcccccCceEEEEEecCC-------------------CCceeeeccCCCCcccccceECCCCC-EEEEEEec
Confidence 7765 5699999987 433 344446777899999999998 56666544
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=1.3e-24 Score=194.61 Aligned_cols=284 Identities=11% Similarity=0.076 Sum_probs=209.3
Q ss_pred eeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecC----CCCceEEEEeecCCcceEEE
Q 019059 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCP----FDQRIFSTVFSTGESYGAAI 95 (346)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~~~~~~~~~d~~i~v 95 (346)
..+.+++++..++++. .++.|.+|+++....... ..+. +...+..++|+| ++++++++. ..++.|.+
T Consensus 182 ~~v~~spdg~~l~v~~----~d~~V~v~D~~~~t~~~~-~~i~-~g~~p~~va~sp~~~~dg~~l~v~~---~~~~~v~v 252 (543)
T 1nir_A 182 HISRMSASGRYLLVIG----RDARIDMIDLWAKEPTKV-AEIK-IGIEARSVESSKFKGYEDRYTIAGA---YWPPQFAI 252 (543)
T ss_dssp EEEEECTTSCEEEEEE----TTSEEEEEETTSSSCEEE-EEEE-CCSEEEEEEECCSTTCTTTEEEEEE---EESSEEEE
T ss_pred ceEEECCCCCEEEEEC----CCCeEEEEECcCCCCcEE-EEEe-cCCCcceEEeCCCcCCCCCEEEEEE---ccCCeEEE
Confidence 3455788888888875 348999999963333332 3333 556789999999 999988863 34789999
Q ss_pred EecCcccCCCCCccceeeeeeec----------cCC-ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc
Q 019059 96 WQIPELYGQLNSPQLERIAALDA----------HVG-KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
||.. +.+++..+.. |.+ .+.++.++|++..++++...++.|.+||..+.+....... .
T Consensus 253 ~D~~---------t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~- 321 (543)
T 1nir_A 253 MDGE---------TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-G- 321 (543)
T ss_dssp EETT---------TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-E-
T ss_pred Eecc---------ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-c-
Confidence 9987 6667666654 223 7899999999987555667789999999987654331111 1
Q ss_pred CCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc---c-eeEEE-eCCCCCcEEEEec-CCCeEEEEE
Q 019059 165 SGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA---H-VRNVD-YDTKKKHLLVTAA-DESGIHLWD 237 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~---~-v~~~~-~~~~~~~~l~~~~-~dg~i~i~d 237 (346)
+...+..+.|+|+++++++++ .+++|.+||+.+++....+..+ | -..+. ++|++..+++++. .|++|.+||
T Consensus 322 --~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d 399 (543)
T 1nir_A 322 --AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIG 399 (543)
T ss_dssp --CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred --cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEE
Confidence 123577899999999887766 4889999999999887776632 3 11222 4677444777775 679999999
Q ss_pred cccC------CcceeeecCCCcceEEEEeCCCCCcEEEEec-------CCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 238 LRML------KAPIQELPGHTHWTWAVCCNPEYDGFILSAG-------TDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 238 ~~~~------~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
+... .+.++++..|...+..++++|++ ++|++++ .+++|.+||+.+ .
T Consensus 400 ~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~-------------------~ 459 (543)
T 1nir_A 400 TDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKN-------------------L 459 (543)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTC-------------------T
T ss_pred eCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCC-------------------C
Confidence 9862 34788899998899999999999 8999887 267999999998 4
Q ss_pred ccc-cc--------cccccceeeEEEeCCCCCcEEEEee----cCCeEEEeeec
Q 019059 305 SLL-NS--------YSDYEDSVYGLAWSSREPWIFASLS----YDGRVRNHMLE 345 (346)
Q Consensus 305 ~~~-~~--------~~~~~~~v~~~~~~~~~~~~l~s~~----~d~~v~vw~~~ 345 (346)
+.. .. +..+...+..+.|+|+|+.++++.. .|+.|.|||.+
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 460 DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 443 22 2355678999999999996665543 47999999965
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=3.2e-24 Score=192.00 Aligned_cols=284 Identities=10% Similarity=0.042 Sum_probs=201.8
Q ss_pred CCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeee-ccccceEEeeecCCCCceEEEEeecCCcceEEEEec--Cc
Q 019059 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF-SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI--PE 100 (346)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~--~~ 100 (346)
+++++..++.+ ..++.+.+|+..... +. ..+. ++. +..++|+|++++|+++ +.|+.|.+||+ .
T Consensus 145 ~~p~~~~~vs~----~~d~~V~v~D~~t~~--~~-~~i~~g~~--~~~v~~spdg~~l~v~----~~d~~V~v~D~~~~- 210 (543)
T 1nir_A 145 LDLPNLFSVTL----RDAGQIALVDGDSKK--IV-KVIDTGYA--VHISRMSASGRYLLVI----GRDARIDMIDLWAK- 210 (543)
T ss_dssp CCGGGEEEEEE----GGGTEEEEEETTTCC--EE-EEEECSTT--EEEEEECTTSCEEEEE----ETTSEEEEEETTSS-
T ss_pred cCCCCEEEEEE----cCCCeEEEEECCCce--EE-EEEecCcc--cceEEECCCCCEEEEE----CCCCeEEEEECcCC-
Confidence 45555444333 356889999766532 22 3333 333 8899999999999986 46799999999 5
Q ss_pred ccCCCCCccceeeeeeeccCCceEEEEeec----CCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC-----CC-cee
Q 019059 101 LYGQLNSPQLERIAALDAHVGKINCVLWWS----SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS-----GM-LHY 170 (346)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-----~~-~~~ 170 (346)
+.+.+.++. +...+..++|+| +|+++++++..++.|.+||..+.+....+...... .| ...
T Consensus 211 --------t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 211 --------EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp --------SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred --------CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 567777776 455679999999 99964444456899999999877654443321100 01 126
Q ss_pred eEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccc--eeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCccee
Q 019059 171 LSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTN--SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQ 246 (346)
Q Consensus 171 v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~--~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (346)
+..+.++|++..+++.. .++.|.+||+.+.+.+. .+..+. +.+++|+|+++++++++..+++|.+||+.+ .+.+.
T Consensus 282 v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~ 360 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSA 360 (543)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEE
T ss_pred eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEE
Confidence 88899999887765554 68999999999876554 443333 889999999996666777789999999997 55666
Q ss_pred eecC----CCcceEEEEeCCCCCcEEEEec-CCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEE
Q 019059 247 ELPG----HTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (346)
Q Consensus 247 ~~~~----~~~~v~~v~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (346)
.+.. |......+ ++|++..+++++. .|++|.+||+.+.+.. ...+++++++..|...+..++
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~------------~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP------------QYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT------------TTBTSEEEEEECSCSCCCCEE
T ss_pred eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc------------hhcCeEEEEEEcCCCCceEEE
Confidence 6653 54433333 4777427777776 5899999999861111 012578888888888889999
Q ss_pred eCCCCCcEEEEee-------cCCeEEEeeec
Q 019059 322 WSSREPWIFASLS-------YDGRVRNHMLE 345 (346)
Q Consensus 322 ~~~~~~~~l~s~~-------~d~~v~vw~~~ 345 (346)
++|+++ .|.+++ .+++|.+||++
T Consensus 428 ~~pdg~-~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 428 THPKSS-HLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp CCTTCC-EEEECCTTCSSHHHHTCEEEEETT
T ss_pred cCCCCC-cEEEecCCCCCcccCceEEEEECC
Confidence 999998 677765 37899999986
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.7e-24 Score=201.02 Aligned_cols=284 Identities=11% Similarity=0.065 Sum_probs=194.4
Q ss_pred EeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEe
Q 019059 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (346)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (346)
.+..+.++++ .+++++. ++.+++|++... . ...+..+...+.+++|+|+++.|+++ .++.|.+|+
T Consensus 83 ~v~~~~~spd-~~~~~~~-----~~~i~~~d~~~~--~--~~~l~~~~~~~~~~~~SpdG~~la~~-----~~~~i~v~~ 147 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT-----QGGLVGFDMLAR--K--VTYLFDTNEETASLDFSPVGDRVAYV-----RNHNLYIAR 147 (706)
T ss_dssp CCEEEEETTT-TEEEEEE-----TTEEEEEETTTT--E--EEEEECCTTCCTTCEECTTSSEEEEE-----ETTEEEEEE
T ss_pred CceeEEECCC-CeEEEEE-----CCEEEEEECCCC--c--eEEccCCcccccCCcCCCCCCEEEEE-----ECCeEEEEe
Confidence 4666778888 6666653 378999988653 2 23445677889999999999998885 568999999
Q ss_pred cCcccCCCCCccceeeeeeeccCCc--------------eEEEEeecCCCCcEEEEe-----------------------
Q 019059 98 IPELYGQLNSPQLERIAALDAHVGK--------------INCVLWWSSGRHDKLVSI----------------------- 140 (346)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------i~~~~~~~~~~~~~~~~~----------------------- 140 (346)
+....+ ..++.......+... +.++.|+|||+++++++.
T Consensus 148 ~~~~~~----~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 148 GGKLGE----GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp CBCTTS----CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cCcccc----cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 972000 003333323233222 589999999996444431
Q ss_pred ---------cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC-----eEEEEEccCCCcccee
Q 019059 141 ---------DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES-----SVQFWDLRSMGKTNSI 206 (346)
Q Consensus 141 ---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~ 206 (346)
.+..|++||+.+++... +. ....+...+..++|+|+++.+++++.++ .|++||+.+++....+
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTVY-LQ--TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEEE-CC--CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceEe-ec--cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 34679999998654211 11 1123455789999999999999887665 8999999998444333
Q ss_pred ecc-c------eeEEEeCC--CCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEE-EEeCCCCCcEE-EEecCCC
Q 019059 207 EHA-H------VRNVDYDT--KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWA-VCCNPEYDGFI-LSAGTDS 275 (346)
Q Consensus 207 ~~~-~------v~~~~~~~--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~l-~s~~~d~ 275 (346)
... + +.+++|+| +++ +++++..++.+++|++......+..+..+...+.. ++|+|++ ..| ++++.++
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg-~~l~~~~~~~~ 378 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKG-TRLYFESTEAS 378 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTS-SEEEEEESSSC
T ss_pred EEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCC-CEEEEEecCCC
Confidence 211 1 36789999 998 88888899999999887435567777778877876 7999999 555 4555555
Q ss_pred ----eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecC---CeEEEeeecC
Q 019059 276 ----TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD---GRVRNHMLEK 346 (346)
Q Consensus 276 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~v~vw~~~~ 346 (346)
.|..||+.+ ++ ...+. |...+.+++|+|+++.++++++.+ +.|++|++++
T Consensus 379 ~~~~~l~~~d~~~-------------------~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 379 PLERHFYCIDIKG-------------------GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp TTCBEEEEEETTC-------------------CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred CceEEEEEEEcCC-------------------CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 566667665 33 23333 455689999999998444444443 5699999753
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=1.2e-23 Score=177.39 Aligned_cols=237 Identities=8% Similarity=-0.012 Sum_probs=171.1
Q ss_pred eeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEc
Q 019059 71 LSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSL 150 (346)
Q Consensus 71 ~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~ 150 (346)
..|.+++..++++ ++.++.|.+||+. .++.+..+..+...+ .++|+|+++.+++++..++.|.+||+
T Consensus 3 ~~~~~~~~~~~v~---~~~~~~v~~~d~~---------~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 3 AMFQTTSNFGIVV---EQHLRRISFFSTD---------TLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIET 69 (331)
T ss_dssp ----CCCCEEEEE---EGGGTEEEEEETT---------TCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred eeEcCCCCEEEEE---ecCCCeEEEEeCc---------ccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 3466777776666 3678899999998 566666666666667 99999999965555555889999999
Q ss_pred CCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-C--eEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEE
Q 019059 151 DCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-S--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT 226 (346)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~ 226 (346)
.+++........ +.....+++|+|+++.++++..+ + .|.+||+.+++....+..+. +.+++|+|++++++++
T Consensus 70 ~~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 145 (331)
T 3u4y_A 70 QLEPPKVVAIQE----GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILI 145 (331)
T ss_dssp SSSSCEEEEEEE----CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEE
T ss_pred CCCceeEEeccc----CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEE
Confidence 876641222211 12234449999999999854444 2 89999999998877776545 9999999999866666
Q ss_pred ecCCCe-EEEEEcccCCcce---eeecCCCcceEEEEeCCCCCc-EEEEecCCCeEEEEecCCCCCCCCCcccccCCccc
Q 019059 227 AADESG-IHLWDLRMLKAPI---QELPGHTHWTWAVCCNPEYDG-FILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ 301 (346)
Q Consensus 227 ~~~dg~-i~i~d~~~~~~~~---~~~~~~~~~v~~v~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (346)
...++. |.+|++...+... .........+..++|+|+| + +++++..++.|++||+.+
T Consensus 146 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~d~~~----------------- 207 (331)
T 3u4y_A 146 DRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDG-NFAFVANLIGNSIGILETQN----------------- 207 (331)
T ss_dssp EETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTS-SEEEEEETTTTEEEEEECSS-----------------
T ss_pred ecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCC-CEEEEEeCCCCeEEEEECCC-----------------
Confidence 677678 9999987533221 1122344567999999999 6 555666789999999987
Q ss_pred ccccc---ccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 302 RANSL---LNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 302 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++. +..+..+ ..+..++|+|+++.++++...++.|.+||++
T Consensus 208 --~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 208 --PENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp --TTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred --CcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 555 5555443 4578999999998566666678889999975
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2.2e-23 Score=177.33 Aligned_cols=272 Identities=11% Similarity=0.062 Sum_probs=193.1
Q ss_pred eeccCCCCcceEEEeecccC---CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEE
Q 019059 20 SDVKADTDHTSFLTGTLSLK---EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (346)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw 96 (346)
..+.+++++.+++++..... .++.+.+|+..... .. .. ......+..++|+|+++.++++ +..++.|.+|
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~--~~-~~-~~~~~~~~~~~~s~dg~~l~v~---~~~~~~v~~~ 116 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE--VT-QA-IHNDLKPFGATINNTTQTLWFG---NTVNSAVTAI 116 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC--EE-EE-EEESSCCCSEEEETTTTEEEEE---ETTTTEEEEE
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe--EE-EE-EecCCCcceEEECCCCCEEEEE---ecCCCEEEEE
Confidence 34556777777777653211 25678777665432 22 22 2234567889999999987776 3667899999
Q ss_pred ecCcccCCCCCccceeeeeeeccCC---------ceEEEEeecCCCCcEEEE-ecCCeEEEEEcCCCCCCceeeecccCC
Q 019059 97 QIPELYGQLNSPQLERIAALDAHVG---------KINCVLWWSSGRHDKLVS-IDEENIFLWSLDCSNKNAQVQSKQSSG 166 (346)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~~~~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~ 166 (346)
|.. ..+.+..+..+.. .+.+++|+|+++.++++. +.++.|.+||+.+++....+. .
T Consensus 117 d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-----~ 182 (353)
T 3vgz_A 117 DAK---------TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-----N 182 (353)
T ss_dssp ETT---------TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----C
T ss_pred eCC---------CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----C
Confidence 987 5666666655432 278899999999755555 357899999998665332222 1
Q ss_pred CceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec-----cc-eeEEEeCCCCCcEEEEecCCCeEEEEEccc
Q 019059 167 MLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH-----AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (346)
+...+.+++|+|+++.++++..++.|.+||+.+++....+.. .+ +.+++|+|+++.++++...++.|.+||+.+
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 122477899999999999999999999999999887766653 22 888999999985555566669999999987
Q ss_pred CCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
.+.+..+.... ...++|+|++..++++...++.|.+||..+ ++.+..+.... .+.++
T Consensus 263 -~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~-------------------~~~~~~~~~~~-~~~~~ 319 (353)
T 3vgz_A 263 -GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS-------------------YKVVKTFDTPT-HPNSL 319 (353)
T ss_dssp -CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT-------------------TEEEEEEECCS-EEEEE
T ss_pred -CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC-------------------CeEEEEEecCC-CCCeE
Confidence 44565555433 367899999933555555799999999988 67666665443 57999
Q ss_pred EeCCCCCcEEEEeec
Q 019059 321 AWSSREPWIFASLSY 335 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~ 335 (346)
+|+|+++.++++...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 999999855555443
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=4.8e-24 Score=199.09 Aligned_cols=289 Identities=11% Similarity=0.058 Sum_probs=197.5
Q ss_pred eeEeeeccCCCCcceEEEeecccCC--CCeEEEEEecCCCCeEEEeeeeccc----------------------cceEEe
Q 019059 16 ARCISDVKADTDHTSFLTGTLSLKE--ENEVHLLRLSSGGTELICEGLFSHP----------------------NEIWDL 71 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~h~----------------------~~v~~~ 71 (346)
.+.+..+.+++++.+++.+....+. ...+++|++....... ......+. ..|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4456778889999999887532110 1278888876643211 11111111 348899
Q ss_pred eecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccce--eeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEE
Q 019059 72 SSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLE--RIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS 149 (346)
Q Consensus 72 ~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd 149 (346)
+|+|+++.|+++. ++.|.+||+. ... ....+..|...+..++|+|||++ ++.+ .++.|++||
T Consensus 115 ~~SpDg~~l~~~~-----~~~i~~~d~~---------~~~~~~~~~l~~~~~~~~~~~~SPDG~~-la~~-~~~~i~~~d 178 (741)
T 2ecf_A 115 QWSPDAQRLLFPL-----GGELYLYDLK---------QEGKAAVRQLTHGEGFATDAKLSPKGGF-VSFI-RGRNLWVID 178 (741)
T ss_dssp EECTTSSEEEEEE-----TTEEEEEESS---------SCSTTSCCBCCCSSSCEEEEEECTTSSE-EEEE-ETTEEEEEE
T ss_pred EECCCCCEEEEEe-----CCcEEEEECC---------CCCcceEEEcccCCcccccccCCCCCCE-EEEE-eCCcEEEEe
Confidence 9999999998873 2899999997 331 34456678888999999999995 3333 367999999
Q ss_pred cCCCCCCceeeecccCCC------------ceeeEEEEeCCCCCcEEEEecCC---------------------------
Q 019059 150 LDCSNKNAQVQSKQSSGM------------LHYLSGGAWDPHDVNAVAATCES--------------------------- 190 (346)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~d~--------------------------- 190 (346)
+.+++.. .+........ ...+..++|+||++.|++++.|+
T Consensus 179 ~~~g~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 179 LASGRQM-QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp TTTTEEE-ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred cCCCCEE-EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 9865422 1111110000 00147899999999999987665
Q ss_pred ------eEEEEEccC-CCccceeec-cc---eeEEEeCCCCCcEEEEec-----CCCeEEEEEcccCCcceeeecCCCc-
Q 019059 191 ------SVQFWDLRS-MGKTNSIEH-AH---VRNVDYDTKKKHLLVTAA-----DESGIHLWDLRMLKAPIQELPGHTH- 253 (346)
Q Consensus 191 ------~i~i~d~~~-~~~~~~~~~-~~---v~~~~~~~~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~- 253 (346)
.|++||+.+ ++....... .+ +..++| |+|+ .|++++ .+..|++||+.+ ......+..+..
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~ 334 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPT 334 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSS
T ss_pred CCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCC
Confidence 789999988 765443321 22 999999 9999 555433 356899999987 444444444432
Q ss_pred ---ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE-EeCCCCCcE
Q 019059 254 ---WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL-AWSSREPWI 329 (346)
Q Consensus 254 ---~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ 329 (346)
.+..++|+|+| +++++++.|+.++||.+.. .+. ...+..|...|..+ .|+|+++.+
T Consensus 335 ~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~------------------~~~-~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 335 WVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDS------------------KGK-AAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CCCCCSCCEECTTS-CEEEEECTTSSCEEEEECS------------------SSC-EEESCCSSSCEEEEEEEETTTTEE
T ss_pred cCCcCCceEECCCC-eEEEEecCCCccEEEEEcC------------------CCC-eeeeeecceEEEeEeEEeCCCCEE
Confidence 45689999999 7999999999888887763 134 56677777778887 599999855
Q ss_pred EEEeecCC--eEEEeeec
Q 019059 330 FASLSYDG--RVRNHMLE 345 (346)
Q Consensus 330 l~s~~~d~--~v~vw~~~ 345 (346)
+++++.++ .++||+++
T Consensus 395 ~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVP 412 (741)
T ss_dssp EEEECSSCTTCBEEEEEE
T ss_pred EEEEeCCCCceEEEEEEE
Confidence 56666666 89999874
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.9e-24 Score=180.63 Aligned_cols=260 Identities=10% Similarity=0.045 Sum_probs=183.8
Q ss_pred CCCeEEEEEecCCCCeEEEeeeecccc-ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec
Q 019059 40 EENEVHLLRLSSGGTELICEGLFSHPN-EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA 118 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 118 (346)
.++.+.+|+.... ........++.. .+..++|+|+++.++++. ..++.|.+||+. ..+.+..+..
T Consensus 9 ~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~~~v~~~d~~---------~~~~~~~~~~ 74 (337)
T 1pby_B 9 RPDKLVVIDTEKM--AVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKSESLVKIDLV---------TGETLGRIDL 74 (337)
T ss_dssp TTTEEEEEETTTT--EEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTTTEEEEEETT---------TCCEEEEEEC
T ss_pred CCCeEEEEECCCC--cEEEEEEcCCCCCCccceEEcCCCCEEEEEe---CCCCeEEEEECC---------CCCeEeeEEc
Confidence 5688999987653 222222122222 588999999998887763 667899999987 4555555542
Q ss_pred c-----CCceEEEEeecCCCCcEEEEe-----------cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCc
Q 019059 119 H-----VGKINCVLWWSSGRHDKLVSI-----------DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN 182 (346)
Q Consensus 119 ~-----~~~i~~~~~~~~~~~~~~~~~-----------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 182 (346)
. ...+..++|+|+++.++++.. .++.|.+||+.+++....+.. ...+..++|+|+++.
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------PRQITMLAWARDGSK 148 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC------CSSCCCEEECTTSSC
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC------CCCcceeEECCCCCE
Confidence 1 225778999999986444431 479999999986543322221 125678899999998
Q ss_pred EEEEecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCC-----------------------eEEEEEc
Q 019059 183 AVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES-----------------------GIHLWDL 238 (346)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg-----------------------~i~i~d~ 238 (346)
++++ ++.|++||+.+++....+.... ...+.|+|++..+++++..++ .|.+||+
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8888 6889999999988776665333 345588999985444443443 4689999
Q ss_pred ccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceee
Q 019059 239 RMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVY 318 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 318 (346)
++.......+..+...+.+++|+|++ .+++++ ++.|.+||+.+ ++.+..+..+ ..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~-------------------~~~~~~~~~~-~~~~ 283 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEK-------------------NASIKRVPLP-HSYY 283 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTT-------------------TEEEEEEECS-SCCC
T ss_pred CCCCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCC-------------------CcCcceecCC-Ccee
Confidence 87432223344566678899999999 888877 78999999987 6666555433 3478
Q ss_pred EEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 319 GLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 319 ~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++|+|+++ .|++++.++.|++||++
T Consensus 284 ~~~~s~dg~-~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 284 SVNVSTDGS-TVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEECTTSC-EEEEESBSSEEEEEETT
T ss_pred eEEECCCCC-EEEEEcCCCcEEEEECc
Confidence 999999998 66667889999999985
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=3.2e-23 Score=171.52 Aligned_cols=222 Identities=11% Similarity=0.064 Sum_probs=163.3
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCC-CCCCceeeecccC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDC-SNKNAQVQSKQSS 165 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~ 165 (346)
++.++.|.+||+. ..+.. .+..|...|.+++|+|++++ ++++ .++.|++||+.+ ++. ......
T Consensus 18 ~~~~~~i~~~d~~---------~~~~~-~~~~~~~~v~~~~~spdg~~-l~~~-~~~~i~~~d~~~~~~~-~~~~~~--- 81 (297)
T 2ojh_A 18 GSMRSSIEIFNIR---------TRKMR-VVWQTPELFEAPNWSPDGKY-LLLN-SEGLLYRLSLAGDPSP-EKVDTG--- 81 (297)
T ss_dssp CCCCEEEEEEETT---------TTEEE-EEEEESSCCEEEEECTTSSE-EEEE-ETTEEEEEESSSCCSC-EECCCT---
T ss_pred CCcceeEEEEeCC---------CCcee-eeccCCcceEeeEECCCCCE-EEEE-cCCeEEEEeCCCCCCc-eEeccc---
Confidence 4688999999997 44443 45578899999999999994 3333 489999999987 543 222211
Q ss_pred CCceeeEEEEeCCCCCcEEEEec--CC--eEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEccc
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATC--ES--SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~--d~--~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (346)
.+...+.+++|+|+++.+++++. ++ .|..+++.+++ ...+.... +..++|+|+++.+++++..++.+++|+++.
T Consensus 82 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 82 FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 12347889999999999999883 34 44445555544 33333233 889999999995555888899999999765
Q ss_pred CCcceeeecCCCcceEEEEeCCCCCcEEEEec-CCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE
Q 019059 241 LKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (346)
Q Consensus 241 ~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (346)
.......+..+...+.++.|+|++ .+|+.++ .|+.++||++.. ....+..+..|...+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~------------------~~~~~~~~~~~~~~~~~ 221 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRV------------------DGSSVERITDSAYGDWF 221 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEET------------------TSSCEEECCCCSEEEEE
T ss_pred CCCcceEcccCCCccccceECCCC-CEEEEEecCCCCccEEEECC------------------CCCCcEEEecCCcccCC
Confidence 444566777788899999999999 7666554 689999999873 14555667777788999
Q ss_pred EEeCCCCCcEEEEeecC-----------CeEEEeeec
Q 019059 320 LAWSSREPWIFASLSYD-----------GRVRNHMLE 345 (346)
Q Consensus 320 ~~~~~~~~~~l~s~~~d-----------~~v~vw~~~ 345 (346)
++|+|+++ .|+.++.+ +.|++|+++
T Consensus 222 ~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 222 PHPSPSGD-KVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp EEECTTSS-EEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred eEECCCCC-EEEEEEcCCCCCcccccCceEEEEEecC
Confidence 99999998 66666655 569999875
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=4.8e-23 Score=192.32 Aligned_cols=280 Identities=11% Similarity=0.064 Sum_probs=198.8
Q ss_pred eeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEec
Q 019059 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (346)
+..+.+++++..++++.. +.+++|++...... ....+..|...+..++|+|+|+.|+.+ .++.|.+||+
T Consensus 111 v~~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~-~~~~l~~~~~~~~~~~~SPDG~~la~~-----~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-----GELYLYDLKQEGKA-AVRQLTHGEGFATDAKLSPKGGFVSFI-----RGRNLWVIDL 179 (741)
T ss_dssp SCCCEECTTSSEEEEEET-----TEEEEEESSSCSTT-SCCBCCCSSSCEEEEEECTTSSEEEEE-----ETTEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-----CcEEEEECCCCCcc-eEEEcccCCcccccccCCCCCCEEEEE-----eCCcEEEEec
Confidence 567778999999988763 78999998764100 123456788899999999999998886 3458999998
Q ss_pred CcccCCCCCccceeeeeeeccCCc----------------eEEEEeecCCCCcEEEEecCC-------------------
Q 019059 99 PELYGQLNSPQLERIAALDAHVGK----------------INCVLWWSSGRHDKLVSIDEE------------------- 143 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~----------------i~~~~~~~~~~~~~~~~~~d~------------------- 143 (346)
. ..+.......+... +..++|+|||+++++++. |+
T Consensus 180 ~---------~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~-d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 180 A---------SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI-DESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp T---------TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE-ECTTSCEEEEEEECSSCEEEE
T ss_pred C---------CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE-cCCCCceEecCCCCCCcccce
Confidence 7 34443333333322 478999999997444443 33
Q ss_pred --------------eEEEEEcCC-CCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec-----CCeEEEEEccCCCcc
Q 019059 144 --------------NIFLWSLDC-SNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-----ESSVQFWDLRSMGKT 203 (346)
Q Consensus 144 --------------~i~vwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~ 203 (346)
.|.+||+.+ ++. ..+... ..+...+..++| ||++.|++++. +..|++||+.+++..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~--~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQT-QWIDLG--KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCC-EEECCC--SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCce-EEecCC--CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 788899886 542 222111 135668999999 99999987764 568999999998866
Q ss_pred ceeeccc------eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEE-EeCCCCCcEE-EEecCCC
Q 019059 204 NSIEHAH------VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAV-CCNPEYDGFI-LSAGTDS 275 (346)
Q Consensus 204 ~~~~~~~------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v-~~~~~~~~~l-~s~~~d~ 275 (346)
..+.... +..++|+|+++ ++++++.++.+++|.+..... ...+..|...+..+ .|+|++ ..| ++++.++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg-~~l~~~~~~~~ 402 (741)
T 2ecf_A 326 VLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKA-GLAYFRAGIES 402 (741)
T ss_dssp EEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTT-TEEEEEECSSC
T ss_pred EEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCC-CEEEEEEeCCC
Confidence 5544221 35899999998 888999999888887764344 77777888888887 599999 555 5666666
Q ss_pred --eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecC---CeEEEeeec
Q 019059 276 --TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD---GRVRNHMLE 345 (346)
Q Consensus 276 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~v~vw~~~ 345 (346)
.++||++.. .+.....+.. ...+.+++|+|+++.++++.+.. ..+.+|+++
T Consensus 403 ~~~~~l~~~~~------------------~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 403 ARESQIYAVPL------------------QGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp TTCBEEEEEET------------------TCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred CceEEEEEEEc------------------CCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 899999875 1333444544 44578999999998555555543 357777653
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=3.7e-23 Score=175.91 Aligned_cols=248 Identities=8% Similarity=-0.020 Sum_probs=184.2
Q ss_pred cccceEEeeecCCCCceEEEEeecC---CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTG---ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
....+..++|+|+++.++++...+. .++.|.+||.. ..+.+..+.. ...+..++|+|+++.++++..
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~---------~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPV---------TLEVTQAIHN-DLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTT---------TCCEEEEEEE-SSCCCSEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCC---------CCeEEEEEec-CCCcceEEECCCCCEEEEEec
Confidence 4467889999999998887642111 27799999987 5666666644 345788999999997566666
Q ss_pred cCCeEEEEEcCCCCCCceeeecccC----CCceeeEEEEeCCCCCcEEEEe--cCCeEEEEEccCCCccceee-ccc-ee
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQSS----GMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIE-HAH-VR 212 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~-~~~-v~ 212 (346)
.++.|.+||..+++....+...... .....+.+++|+|+++.+++++ .++.|.+||+.+++....+. .+. +.
T Consensus 109 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 109 VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST 188 (353)
T ss_dssp TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC
T ss_pred CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc
Confidence 6899999999877644333321100 0011368899999999888776 47899999999998877776 344 89
Q ss_pred EEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC----CCcceEEEEeCCCCCcEEEEe-cCCCeEEEEecCCCCC
Q 019059 213 NVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG----HTHWTWAVCCNPEYDGFILSA-GTDSTVNLWLVSTSNH 287 (346)
Q Consensus 213 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~v~~v~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~ 287 (346)
+++|+|+++ .+++++.++.|.+||+.+ .+.+..+.. +...+..++|+|++ .+++++ ..++.|.+||..+
T Consensus 189 ~~~~s~dg~-~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~--- 262 (353)
T 3vgz_A 189 GLALDSEGK-RLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTAR-QRAFITDSKAAEVLVVDTRN--- 262 (353)
T ss_dssp CCEEETTTT-EEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTT-TEEEEEESSSSEEEEEETTT---
T ss_pred eEEECCCCC-EEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCC-CEEEEEeCCCCEEEEEECCC---
Confidence 999999998 777778899999999987 445555543 45567889999999 655554 4569999999987
Q ss_pred CCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 288 DELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.+..+.... ...++|+|+++.++++...++.|.+||++
T Consensus 263 ----------------~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 263 ----------------GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp ----------------CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ----------------CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 66655554433 26799999998666777689999999975
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=2.2e-22 Score=170.25 Aligned_cols=247 Identities=11% Similarity=0.154 Sum_probs=166.4
Q ss_pred eeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEE-EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEec
Q 019059 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELI-CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (346)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (346)
..+.+++++..++++.. .++.+.+|++........ ...+.. ...+..++|+|+++.++++. ..++.|.+|++
T Consensus 41 ~~~~~spdg~~l~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~---~~~~~i~~~d~ 113 (343)
T 1ri6_A 41 QPMVVSPDKRYLYVGVR---PEFRVLAYRIAPDDGALTFAAESAL-PGSLTHISTDHQGQFVFVGS---YNAGNVSVTRL 113 (343)
T ss_dssp CCEEECTTSSEEEEEET---TTTEEEEEEECTTTCCEEEEEEEEC-SSCCSEEEECTTSSEEEEEE---TTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEeec---CCCeEEEEEecCCCCceeecccccc-CCCCcEEEEcCCCCEEEEEe---cCCCeEEEEEC
Confidence 34557778877777643 248999999985433332 233333 34889999999999887763 55789999998
Q ss_pred CcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceee--ecccCCCceeeEEEEe
Q 019059 99 PELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQ--SKQSSGMLHYLSGGAW 176 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~ 176 (346)
.. ....+....+.. ...+.+++|+|+++.+++++..++.|.+||+.+........ ... ......+..++|
T Consensus 114 ~~------~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 185 (343)
T 1ri6_A 114 ED------GLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT-TVEGAGPRHMVF 185 (343)
T ss_dssp ET------TEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE-CSTTCCEEEEEE
T ss_pred CC------CccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc-cCCCCCcceEEE
Confidence 31 013445555543 34588999999999644444478999999998633222211 111 111236778999
Q ss_pred CCCCCcEEEEe-cCCeEEEEEccC--CCc--ccee---ecc----c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccC--
Q 019059 177 DPHDVNAVAAT-CESSVQFWDLRS--MGK--TNSI---EHA----H-VRNVDYDTKKKHLLVTAADESGIHLWDLRML-- 241 (346)
Q Consensus 177 ~~~~~~l~~~~-~d~~i~i~d~~~--~~~--~~~~---~~~----~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-- 241 (346)
+|+++.+++++ .++.|.+||+.. ++. ...+ ..+ . +..++|+|+++.+++++..++.|.+||+...
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~ 265 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS 265 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC
Confidence 99999887666 689999999964 332 1111 111 1 6689999999856667778999999999831
Q ss_pred -CcceeeecCCCcceEEEEeCCCCCcEEEEec-CCCeEEEEecC
Q 019059 242 -KAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVS 283 (346)
Q Consensus 242 -~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-~d~~i~iwd~~ 283 (346)
...+..+..+.. +..++|+|++ .+|++++ .++.|.+|++.
T Consensus 266 ~~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 266 VLSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CEEEEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEEEEE
T ss_pred ceEEeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEEEEc
Confidence 123444444444 8899999999 7666666 68999999665
No 145
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=3.5e-22 Score=170.76 Aligned_cols=282 Identities=10% Similarity=0.027 Sum_probs=178.9
Q ss_pred ceEEEeecccCCCCeEEEEEecCCCCeEEEeeee--ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCC
Q 019059 29 TSFLTGTLSLKEENEVHLLRLSSGGTELICEGLF--SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (346)
Q Consensus 29 ~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (346)
..+++|+++. .+.|++++++.....+...... .....+..++|+|+++.|+++. .+ .|.+|++..
T Consensus 3 ~~~~vg~~~~--~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~----~~-~v~~~~~~~------ 69 (365)
T 1jof_A 3 HHLMIGTWTP--PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA----MK-KWSSFAVKS------ 69 (365)
T ss_dssp EEEEEEESSS--SCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE----BT-EEEEEEEEE------
T ss_pred EEEEEEEccC--CCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc----cc-eEEEEEECC------
Confidence 4577787653 2579999998766555433221 2335688999999999887763 44 899999851
Q ss_pred Cccceeeeeeec-cCCceEEEEeecCCCCcEE-EEe-------------cCCeEEEEEcCCCCCCceeeecccCCCceee
Q 019059 107 SPQLERIAALDA-HVGKINCVLWWSSGRHDKL-VSI-------------DEENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 107 ~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~-~~~-------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 171 (346)
.++....... ..+...+++|+|+|+++++ ++. .++.+.+|++................+...+
T Consensus 70 --~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~ 147 (365)
T 1jof_A 70 --PTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGI 147 (365)
T ss_dssp --TTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCE
T ss_pred --CCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcc
Confidence 1233222211 1123566899999985333 332 5889999999743222221111000123368
Q ss_pred EEEEeCCCCCcEEEEec-CCeEEEEEcc-CCCcc--ceee--c-cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccC-C
Q 019059 172 SGGAWDPHDVNAVAATC-ESSVQFWDLR-SMGKT--NSIE--H-AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML-K 242 (346)
Q Consensus 172 ~~~~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~--~~~~--~-~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~ 242 (346)
.+++|+|+++.++++.. ++.|++||+. +++.. ..+. . +. +..++|+|+++.++++...++.|.+|++... +
T Consensus 148 ~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 148 HGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred eEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence 89999999998887764 6799999998 66542 2232 1 33 9999999999844444445789999987531 2
Q ss_pred cce------eeec----CCCc------ceEEEE-eCCCCCcEEEEecCC-C-----eEEEEecCCCCCCCCCcccccCCc
Q 019059 243 API------QELP----GHTH------WTWAVC-CNPEYDGFILSAGTD-S-----TVNLWLVSTSNHDELPSESLVESP 299 (346)
Q Consensus 243 ~~~------~~~~----~~~~------~v~~v~-~~~~~~~~l~s~~~d-~-----~i~iwd~~~~~~~~~~~~~~~~~~ 299 (346)
... ..+. +|.. .+..++ |+|+| ++|++++.+ + .|.+|++..
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~~~--------------- 291 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKLRD--------------- 291 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEECT---------------
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEECC---------------
Confidence 221 1121 1222 588999 99999 777766543 2 899999963
Q ss_pred ccccccccc---ccccccceeeEEEeCC---CCCcEEEEeec-CCeEEEeeec
Q 019059 300 NQRANSLLN---SYSDYEDSVYGLAWSS---REPWIFASLSY-DGRVRNHMLE 345 (346)
Q Consensus 300 ~~~~~~~~~---~~~~~~~~v~~~~~~~---~~~~~l~s~~~-d~~v~vw~~~ 345 (346)
.++... ....+...+..++|+| +++ +|++++. ++.|++|+++
T Consensus 292 ---~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~-~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 292 ---CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp ---TSCEEEEEEEEECSSCCTTCCCEEECTTCTT-EEEEECSSSCEEEEEEEE
T ss_pred ---CCCEEEeeeeeecCCCCcccceecCCCcCCC-EEEEEEcCCCeEEEEEEc
Confidence 033322 1222344567899999 787 5666654 5999999875
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=8.2e-23 Score=189.75 Aligned_cols=241 Identities=11% Similarity=0.083 Sum_probs=168.4
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
..|.+++|+|+ +.++++ .++.|.+||+. ..+. ..+..+...+.+++|+|||+. ++. ..++.|
T Consensus 82 ~~v~~~~~spd-~~~~~~-----~~~~i~~~d~~---------~~~~-~~l~~~~~~~~~~~~SpdG~~-la~-~~~~~i 143 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-----TQGGLVGFDML---------ARKV-TYLFDTNEETASLDFSPVGDR-VAY-VRNHNL 143 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-----ETTEEEEEETT---------TTEE-EEEECCTTCCTTCEECTTSSE-EEE-EETTEE
T ss_pred cCceeEEECCC-CeEEEE-----ECCEEEEEECC---------CCce-EEccCCcccccCCcCCCCCCE-EEE-EECCeE
Confidence 46999999999 777665 34899999997 4443 344456778899999999995 333 468999
Q ss_pred EEEEcCC-----CCCCceeeecccCC----------CceeeEEEEeCCCCCcEEEEe-----------------------
Q 019059 146 FLWSLDC-----SNKNAQVQSKQSSG----------MLHYLSGGAWDPHDVNAVAAT----------------------- 187 (346)
Q Consensus 146 ~vwd~~~-----~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~----------------------- 187 (346)
++||+.+ ++.. .+....... +...+.+++|+||++.|++++
T Consensus 144 ~v~~~~~~~~~~g~~~-~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAI-AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEECBCTTSCCCCCE-ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEecCcccccCCCcE-EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 9999987 5432 111111000 001257899999999999887
Q ss_pred ----------cCCeEEEEEccCCCccceeec-cc---eeEEEeCCCCCcEEEEecCCC-----eEEEEEcccCCcceeee
Q 019059 188 ----------CESSVQFWDLRSMGKTNSIEH-AH---VRNVDYDTKKKHLLVTAADES-----GIHLWDLRMLKAPIQEL 248 (346)
Q Consensus 188 ----------~d~~i~i~d~~~~~~~~~~~~-~~---v~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~ 248 (346)
.+..|++||+.+++....... .+ +.+++|+|+++ .+++++.++ .|++||+.+........
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCCEEEEEE
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCceeeEEE
Confidence 346799999998875433321 22 89999999998 666665554 89999998732222222
Q ss_pred c-CCCc---ceEEEEeCC--CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE-EE
Q 019059 249 P-GHTH---WTWAVCCNP--EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG-LA 321 (346)
Q Consensus 249 ~-~~~~---~v~~v~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~ 321 (346)
. .+.. .+..+.|+| +| .++++++.|+.++||++.. .+..+..+..+...+.+ ++
T Consensus 302 ~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~------------------~~~~~~~l~~~~~~v~~~~~ 362 (706)
T 2z3z_A 302 VETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDT------------------TGRLIRQVTKGEWEVTNFAG 362 (706)
T ss_dssp EEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEET------------------TSCEEEECCCSSSCEEEEEE
T ss_pred EccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEEC------------------CCCEEEecCCCCeEEEeeeE
Confidence 1 1222 246789999 99 8999999999999998863 14556667777777776 89
Q ss_pred eCCCCCcEEEEeecCC----eEEEeeec
Q 019059 322 WSSREPWIFASLSYDG----RVRNHMLE 345 (346)
Q Consensus 322 ~~~~~~~~l~s~~~d~----~v~vw~~~ 345 (346)
|+|+++.++++++.++ .|..|+++
T Consensus 363 ~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 363 FDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp ECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 9999985666666655 56666653
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=2.1e-22 Score=187.55 Aligned_cols=285 Identities=14% Similarity=0.102 Sum_probs=181.9
Q ss_pred eeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeecccc---ceEEeeecCCCCceEEEEeecC-----Cc
Q 019059 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPN---EIWDLSSCPFDQRIFSTVFSTG-----ES 90 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~~~~-----~d 90 (346)
...+.+++++..+ .. ..++.+++|+....... ..+..|.. .|.+++||||+++|+++..... .+
T Consensus 19 ~~~~~~spdg~~~-~~----~~dg~i~~~d~~~g~~~---~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~ 90 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR----EQKGTVRLWNVETNTST---VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYT 90 (723)
T ss_dssp CCCCCBSSSSCBC-CC----CSSSCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCC
T ss_pred ccccEEcCCCcEE-EE----eCCCCEEEEECCCCcEE---EEeccccccccccceEEECCCCCEEEEEecCccceeecce
Confidence 3456677777633 22 35678999988765432 23334443 4999999999999988742111 13
Q ss_pred ceEEEEecCcccCCCCCcccee--eeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC-
Q 019059 91 YGAAIWQIPELYGQLNSPQLER--IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM- 167 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~- 167 (346)
+.+.+||+. .++. +.....|...+..++|+|||+. ++.++ ++.|++||+.+++.. .+........
T Consensus 91 ~~i~~~d~~---------~~~~~~l~~~~~~~~~~~~~~~SPdG~~-la~~~-~~~i~~~~~~~g~~~-~~~~~~~~~~~ 158 (723)
T 1xfd_A 91 GYYVLSKIP---------HGDPQSLDPPEVSNAKLQYAGWGPKGQQ-LIFIF-ENNIYYCAHVGKQAI-RVVSTGKEGVI 158 (723)
T ss_dssp SEEEEEESS---------SCCCEECCCTTCCSCCCSBCCBCSSTTC-EEEEE-TTEEEEESSSSSCCE-EEECCCBTTTE
T ss_pred eeEEEEECC---------CCceEeccCCccccccccccEECCCCCE-EEEEE-CCeEEEEECCCCceE-EEecCCCCCce
Confidence 789999997 3332 3333345556889999999996 33333 589999999876532 2221111100
Q ss_pred -------------ceeeEEEEeCCCCCcEEEEecCC----------------------------------eEEEEEccCC
Q 019059 168 -------------LHYLSGGAWDPHDVNAVAATCES----------------------------------SVQFWDLRSM 200 (346)
Q Consensus 168 -------------~~~v~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~ 200 (346)
...+.+++|+||++.|++++.++ .|++||+.++
T Consensus 159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~ 238 (723)
T 1xfd_A 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP 238 (723)
T ss_dssp EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS
T ss_pred ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC
Confidence 01237899999999999887542 7999999988
Q ss_pred Cccceeec-------cc-eeEEEeCCCCCcEEEEec----CCCeEEEEEcccCCcceeeecC-CCcce----EEEEeCCC
Q 019059 201 GKTNSIEH-------AH-VRNVDYDTKKKHLLVTAA----DESGIHLWDLRMLKAPIQELPG-HTHWT----WAVCCNPE 263 (346)
Q Consensus 201 ~~~~~~~~-------~~-v~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~-~~~~v----~~v~~~~~ 263 (346)
+....+.. .. +..++|+|+|+ ++++.. .+..|++||+.+ ++....+.. +...+ ..++|+|+
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 239 THDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp CCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred ceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCC
Confidence 76444442 12 89999999998 665543 235799999986 434443332 33444 37899999
Q ss_pred CCcEEEE--ecCCC------eEEEEec-CCCCCCCCCcccccCCccccccc--cccccccccceeeE-EEeCCCCCcEEE
Q 019059 264 YDGFILS--AGTDS------TVNLWLV-STSNHDELPSESLVESPNQRANS--LLNSYSDYEDSVYG-LAWSSREPWIFA 331 (346)
Q Consensus 264 ~~~~l~s--~~~d~------~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~-~~~~~~~~~~l~ 331 (346)
| +.|+. ...++ .|.+||. .. +. +...+..+...+.. ++|+|+++.+++
T Consensus 317 g-~~l~~~~~~~~~~~~~~~~l~~~d~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~ 376 (723)
T 1xfd_A 317 G-RKFFFIRAIPQGGRGKFYHITVSSSQPN-------------------SSNDNIQSITSGDWDVTKILAYDEKGNKIYF 376 (723)
T ss_dssp S-CSEEEEEEECCSSSSCEEEEEEECSSCC-------------------SSSCCCCBSCCSSSCEEEEEEEETTTTEEEE
T ss_pred C-CeEEEEEecccCCCcceeEEEEEeccCC-------------------CCccceeEeecCCeEEEeeeEEcCCCCEEEE
Confidence 9 65553 55677 4666663 33 22 13444433333444 699999984444
Q ss_pred EeecC--CeEEEeeec
Q 019059 332 SLSYD--GRVRNHMLE 345 (346)
Q Consensus 332 s~~~d--~~v~vw~~~ 345 (346)
++..+ +.+++|+++
T Consensus 377 ~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 377 LSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EESSSCTTCCEEEEEC
T ss_pred EEcCCCCcceEEEEEe
Confidence 44544 789999874
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=1.4e-21 Score=181.93 Aligned_cols=286 Identities=11% Similarity=0.035 Sum_probs=184.2
Q ss_pred eeeccCCCCcceEEEeecccC-----CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceE
Q 019059 19 ISDVKADTDHTSFLTGTLSLK-----EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGA 93 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i 93 (346)
+..+.+++++.+++.+..... ..+.+++|++..... .......+|...+..++|||+|+.|+.+ .++.|
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~-----~~~~i 136 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFI-----FENNI 136 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEE-----ETTEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEE-----ECCeE
Confidence 455678899998888754222 237899999877543 2222233455568999999999999986 33689
Q ss_pred EEEecCcccCCCCCccceeeeeeeccCCc------------------eEEEEeecCCCCcEEEEecC-------------
Q 019059 94 AIWQIPELYGQLNSPQLERIAALDAHVGK------------------INCVLWWSSGRHDKLVSIDE------------- 142 (346)
Q Consensus 94 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~~------------------i~~~~~~~~~~~~~~~~~~d------------- 142 (346)
.+|++. .++.......+... +.+++|+|||+.+++++..+
T Consensus 137 ~~~~~~---------~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 137 YYCAHV---------GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEESSS---------SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEECC---------CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 999987 34443333333332 37899999999644444322
Q ss_pred --------------------CeEEEEEcCCCCCCceeeec-ccCCCceeeEEEEeCCCCCcEEEEec----CCeEEEEEc
Q 019059 143 --------------------ENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPHDVNAVAATC----ESSVQFWDL 197 (346)
Q Consensus 143 --------------------~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~ 197 (346)
..|++||+.+++....+... ....+...+..++|+||++.+++... +..|++||+
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 287 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDA 287 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEET
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeC
Confidence 17899999876532322211 01112457899999999998876653 357999999
Q ss_pred cCCCccceeeccc---e----eEEEeCCCCCcEEEE-ecCCC------eEEEEEcccCCc--ceeeecCCCcceEE-EEe
Q 019059 198 RSMGKTNSIEHAH---V----RNVDYDTKKKHLLVT-AADES------GIHLWDLRMLKA--PIQELPGHTHWTWA-VCC 260 (346)
Q Consensus 198 ~~~~~~~~~~~~~---v----~~~~~~~~~~~~l~~-~~~dg------~i~i~d~~~~~~--~~~~~~~~~~~v~~-v~~ 260 (346)
.+++....+...+ + ..++|+|+|+.+++. +..++ .|.+||+...+. ....+..+...+.. ++|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~ 367 (723)
T 1xfd_A 288 TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY 367 (723)
T ss_dssp TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE
T ss_pred CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEE
Confidence 9988665543222 3 389999999855544 55667 466666323232 14555544444554 689
Q ss_pred CCCCCcEEEEe-cCC--CeEEEEecCCCCCCCCCcccccCCcccccccccccccc---ccceeeEEEeCCCCCcEEEEee
Q 019059 261 NPEYDGFILSA-GTD--STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD---YEDSVYGLAWSSREPWIFASLS 334 (346)
Q Consensus 261 ~~~~~~~l~s~-~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~s~~ 334 (346)
+|+| +.|+.. ..+ +.++||++.... ......+.. |...+..++|+|+++.+++..+
T Consensus 368 spdg-~~l~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 368 DEKG-NKIYFLSTEDLPRRRQLYSANTVG-----------------NFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp ETTT-TEEEEEESSSCTTCCEEEEECSST-----------------TCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred cCCC-CEEEEEEcCCCCcceEEEEEeCCC-----------------CCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 9999 777654 444 789999987510 112223332 5666889999999985555555
Q ss_pred cCC
Q 019059 335 YDG 337 (346)
Q Consensus 335 ~d~ 337 (346)
...
T Consensus 430 ~~~ 432 (723)
T 1xfd_A 430 GPG 432 (723)
T ss_dssp SSS
T ss_pred CCC
Confidence 443
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=4.9e-23 Score=186.98 Aligned_cols=233 Identities=9% Similarity=-0.017 Sum_probs=170.1
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC-CceEEEEeecCCCCcEEEEec--
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSID-- 141 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~-- 141 (346)
..+|++++|+|||+.|+.+. ..|++++||+++ .++. ..+..|. ..+..+.|+|| + +++++..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s---~~~g~~~lw~~~---------~g~~-~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~ 85 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVG---FSEGSVNAYLYD---------GGET-VKLNREPINSVLDPHYGVG-R-VILVRDVSK 85 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEE---EETTEEEEEEEE---------TTEE-EECCSSCCSEECEECTTCS-E-EEEEEECST
T ss_pred ccchheeecCCCCCeEEEEE---ccCCceeEEEEc---------CCCc-EeeecccccccccccCCCC-e-EEEEeccCC
Confidence 46799999999999998863 348899999986 3444 3444555 68999999999 4 4555543
Q ss_pred -CCeEEEEEcCC--CCCCceeeecccCCCceeeEEEEeCCCCCcE-EEEecCCeEEEEEccCCCccceeeccceeEEEeC
Q 019059 142 -EENIFLWSLDC--SNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA-VAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYD 217 (346)
Q Consensus 142 -d~~i~vwd~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~~ 217 (346)
+....+|.+.. ......+ .... .....+|+|+++.+ ++.+.++.+.+||+.+++........ ..+++|+
T Consensus 86 g~~~~~l~~~~~~~~g~~~~l--~~~~----~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~~~~~~s 158 (582)
T 3o4h_A 86 GAEQHALFKVNTSRPGEEQRL--EAVK----PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-GFGFVSD 158 (582)
T ss_dssp TSCCEEEEEEETTSTTCCEEC--TTSC----SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-SCEEEEE
T ss_pred CCcceEEEEEeccCCCccccc--cCCC----CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-CceEEEC
Confidence 45566766553 2222211 1111 23355788888754 34444556669999988654433322 4789999
Q ss_pred CCCCcEEEEecCC----CeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCC--eEEEEecCCCCCCCCC
Q 019059 218 TKKKHLLVTAADE----SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDS--TVNLWLVSTSNHDELP 291 (346)
Q Consensus 218 ~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~ 291 (346)
|||+ .+++++.+ +.|++||+.. + ....+..|...+..++|+||| +.|+++..++ .|++||+.+
T Consensus 159 pDG~-~la~~~~~~~~~~~i~~~d~~~-g-~~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~------- 227 (582)
T 3o4h_A 159 IRGD-LIAGLGFFGGGRVSLFTSNLSS-G-GLRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRD------- 227 (582)
T ss_dssp EETT-EEEEEEEEETTEEEEEEEETTT-C-CCEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTT-------
T ss_pred CCCC-EEEEEEEcCCCCeEEEEEcCCC-C-CceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCC-------
Confidence 9999 77766655 6799999886 3 345777888899999999999 8898888888 899999987
Q ss_pred cccccCCccccccccccccccccceeeEEE--------eCCCCCcEEEEeecCCeEEEeee
Q 019059 292 SESLVESPNQRANSLLNSYSDYEDSVYGLA--------WSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
++.. .+.+|...+..++ |+|+| .++++++.|+.+++|++
T Consensus 228 ------------~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 228 ------------GSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp ------------CCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred ------------CcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence 5555 6667776677777 99999 59999999999999986
No 150
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3e-23 Score=180.93 Aligned_cols=202 Identities=12% Similarity=0.105 Sum_probs=142.8
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCC-------Cceeeecc---cCCCceeeEEEEeCCCCCcEE----EE
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK-------NAQVQSKQ---SSGMLHYLSGGAWDPHDVNAV----AA 186 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~-------~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~----~~ 186 (346)
..+..+++++++.. +++++.++ +++|+...... ........ ...+...+.+++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~~~~~-l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKYGL-VFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTTTE-EEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCCCE-EEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 45788999998883 55556565 89987642110 00111000 011334699999999999999 56
Q ss_pred ecCCeEEEEEccCC--------Cccceee--ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCc
Q 019059 187 TCESSVQFWDLRSM--------GKTNSIE--HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTH 253 (346)
Q Consensus 187 ~~d~~i~i~d~~~~--------~~~~~~~--~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (346)
+.|+.|++||++++ +.+..+. .+| |.+++|+|++..+|++++.||+|++||+++. ..+....+|..
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~~~~~~~~~ 193 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-VKVCATLPSTV 193 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-EEEEEEECGGG
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-cceeeccCCCC
Confidence 67999999999765 2222222 234 9999999984449999999999999999974 44555667889
Q ss_pred ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc-------ccccceeeEEEeCCCC
Q 019059 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY-------SDYEDSVYGLAWSSRE 326 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~ 326 (346)
.|++++|+|+| .+|++|+.||.|++||++. +....+ ..|...|.++.|++++
T Consensus 194 ~v~~v~wspdg-~~lasgs~dg~v~iwd~~~--------------------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 194 AVTSVCWSPKG-KQLAVGKQNGTVVQYLPTL--------------------QEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp CEEEEEECTTS-SCEEEEETTSCEEEECTTC--------------------CEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred ceeEEEEcCCC-CEEEEEcCCCcEEEEccCC--------------------cccccccCCcccCCCCceeEEEEEEecCc
Confidence 99999999999 9999999999999999983 111111 1244579999999988
Q ss_pred CcEEEEeecCCe------EEEeeecC
Q 019059 327 PWIFASLSYDGR------VRNHMLEK 346 (346)
Q Consensus 327 ~~~l~s~~~d~~------v~vw~~~~ 346 (346)
..+++....||. +++|++.+
T Consensus 253 ~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 253 VFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred eEEEEEccCCCccCCCCceEEEEecc
Confidence 633344445533 88998853
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=3e-22 Score=174.63 Aligned_cols=208 Identities=14% Similarity=0.079 Sum_probs=145.2
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCC-------ccceeeeeeeccCCceEEEEeecCCCCcEE-
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS-------PQLERIAALDAHVGKINCVLWWSSGRHDKL- 137 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 137 (346)
..++.+++++++..++++ +.++ +++|+.......... ........+ .+...|.+++|+|+++++++
T Consensus 37 ~~~n~lavs~~~~~l~~~----~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~ 110 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAG----GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSAC 110 (434)
T ss_dssp SCCBCEEEETTTTEEEEE----ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEE
T ss_pred CCccEEEEecCCCEEEEE----CCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEE
Confidence 468899999988888775 4565 889886522110000 000111122 35678999999999995333
Q ss_pred --EEecCCeEEEEEcCCC-----CCCce-eeecccCCCceeeEEEEeCCC-CCcEEEEecCCeEEEEEccCCCccceeec
Q 019059 138 --VSIDEENIFLWSLDCS-----NKNAQ-VQSKQSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMGKTNSIEH 208 (346)
Q Consensus 138 --~~~~d~~i~vwd~~~~-----~~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 208 (346)
+++.|+.|++||+.+. +.... .......+|...|.+++|+|+ +..+++++.|++|++||++++.......
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~- 189 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL- 189 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-
Confidence 4567999999998754 11000 112233457789999999998 6778889999999999999886554433
Q ss_pred cc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC-------CCcceEEEEeCCCCCcEEEE-ecCCC--
Q 019059 209 AH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-------HTHWTWAVCCNPEYDGFILS-AGTDS-- 275 (346)
Q Consensus 209 ~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v~~v~~~~~~~~~l~s-~~~d~-- 275 (346)
+| +.+++|+|++. .|++|+.||.|++||++. . ....+.. |...|.++.|++++ .++++ .+.||
T Consensus 190 ~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~~-~-~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg~~ 265 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPTL-Q-EKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADGTL 265 (434)
T ss_dssp CGGGCEEEEEECTTSS-CEEEEETTSCEEEECTTC-C-EEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTCCS
T ss_pred CCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccCC-c-ccccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCCcc
Confidence 33 99999999998 899999999999999982 2 3343433 33489999999988 66643 33443
Q ss_pred ----eEEEEecCC
Q 019059 276 ----TVNLWLVST 284 (346)
Q Consensus 276 ----~i~iwd~~~ 284 (346)
.+++|+++.
T Consensus 266 ~~~~~v~i~~l~~ 278 (434)
T 2oit_A 266 ETSPDVVMALLPK 278 (434)
T ss_dssp SSCCEEEEEECCC
T ss_pred CCCCceEEEEecc
Confidence 389999986
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=8.6e-22 Score=178.81 Aligned_cols=273 Identities=12% Similarity=0.010 Sum_probs=188.6
Q ss_pred eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccc-cceEEeeecCCCCceEEEEeecCCcceEEE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAAI 95 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~~~~~d~~i~v 95 (346)
.++..+.+++++.+++.+.. .++.+.+|.+.. +. ...+..|. ..+..++|+|+ + ++.+....+.+...++
T Consensus 22 ~~~~~~~~~~DG~~la~~s~---~~g~~~lw~~~~--g~--~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGF---SEGSVNAYLYDG--GE--TVKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHAL 92 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEE---ETTEEEEEEEET--TE--EEECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEE
T ss_pred cchheeecCCCCCeEEEEEc---cCCceeEEEEcC--CC--cEeeecccccccccccCCCC-e-EEEEeccCCCCcceEE
Confidence 35667778889999988753 367889999743 22 24445565 68999999998 4 4444321123445666
Q ss_pred EecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEE
Q 019059 96 WQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGA 175 (346)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 175 (346)
|.++... .+... .+... ..+...+|+|+++.++++++.++.+.+||+.+++. ..+... ...+++
T Consensus 93 ~~~~~~~------~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-~~l~~~-------~~~~~~ 156 (582)
T 3o4h_A 93 FKVNTSR------PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-RELARL-------PGFGFV 156 (582)
T ss_dssp EEEETTS------TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-EEEEEE-------SSCEEE
T ss_pred EEEeccC------CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-EEeecC-------CCceEE
Confidence 6654100 11111 23222 23446789999988777776666677999987642 222211 117889
Q ss_pred eCCCCCcEEEEecC----CeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCCC--eEEEEEcccCCcceee
Q 019059 176 WDPHDVNAVAATCE----SSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADES--GIHLWDLRMLKAPIQE 247 (346)
Q Consensus 176 ~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~ 247 (346)
|+|||+.+++++.+ ..|++||+.+++.. .+... . +..++|+|||+ .|+++..++ .|++||+.. +... .
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~~~-~~~~-~ 232 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMK-VTAGLETAREARLVTVDPRD-GSVE-D 232 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSC-EEEEEECSSCEEEEEECTTT-CCEE-E
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCC-EEEEccCCCeeEEEEEcCCC-CcEE-E
Confidence 99999999988766 78999999988765 33322 2 99999999999 777888888 899999986 4344 6
Q ss_pred ecCCCcceEEEE--------eCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE
Q 019059 248 LPGHTHWTWAVC--------CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (346)
Q Consensus 248 ~~~~~~~v~~v~--------~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (346)
+..|...+..+. |+|+| .++++++.|+.+++|++ . +.... ..+.|.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g--------------------~~~~~---~~~~v~~ 287 (582)
T 3o4h_A 233 LELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-G--------------------ERVEA---PQGNHGR 287 (582)
T ss_dssp CCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-T--------------------EEECC---CSSEEEE
T ss_pred ccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-C--------------------Ceecc---CCCceEE
Confidence 677777777777 99999 99999999999999999 4 12221 2356889
Q ss_pred EEeCCCCCcEEEEeecCCe---EEEeeec
Q 019059 320 LAWSSREPWIFASLSYDGR---VRNHMLE 345 (346)
Q Consensus 320 ~~~~~~~~~~l~s~~~d~~---v~vw~~~ 345 (346)
++|+ +++ ++++++.+.. +.+|+++
T Consensus 288 ~~~s-dg~-~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 288 VVLW-RGK-LVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEE-TTE-EEEEEEETTEEEEEEEETTC
T ss_pred EEec-CCE-EEEEEcCCCCCCeEEEEcCC
Confidence 9999 886 7778777754 5666543
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=8.6e-22 Score=167.08 Aligned_cols=234 Identities=9% Similarity=0.008 Sum_probs=164.9
Q ss_pred EeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC-CceEEEEeecCCCCcEEEEecCCeEEEE
Q 019059 70 DLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLW 148 (346)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~i~vw 148 (346)
.+++++++..+++. +.++.|.+||+. ..+.+..+..+. ..+..++|+|+++.++++...++.|.+|
T Consensus 4 g~~~~~~~~~~v~~----~~~~~v~~~d~~---------~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~ 70 (349)
T 1jmx_B 4 GPALKAGHEYMIVT----NYPNNLHVVDVA---------SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 70 (349)
T ss_dssp CCCCCTTCEEEEEE----ETTTEEEEEETT---------TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cccccCCCEEEEEe----CCCCeEEEEECC---------CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEE
Confidence 46778876666664 578999999998 566666665443 2578999999998655555668999999
Q ss_pred EcCCCCCCceeeecccC-CCceeeEEEEeCCCCCcEEEEecC------------CeEEEEEccCCCcc---ceeeccc-e
Q 019059 149 SLDCSNKNAQVQSKQSS-GMLHYLSGGAWDPHDVNAVAATCE------------SSVQFWDLRSMGKT---NSIEHAH-V 211 (346)
Q Consensus 149 d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~---~~~~~~~-v 211 (346)
|+.+++....+...... .....+..++|+|+++.+++++.+ +.|.+||+.+++.. ..+.... +
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 99876543333211100 002247889999999999988865 89999999985433 3333223 8
Q ss_pred eEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC---------------------------------------
Q 019059 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT--------------------------------------- 252 (346)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------------- 252 (346)
.+++|+|+++ +++ ++. .|.+||+.+ .+.+..+..+.
T Consensus 151 ~~~~~s~dg~-l~~-~~~--~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 225 (349)
T 1jmx_B 151 YLMRAADDGS-LYV-AGP--DIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 225 (349)
T ss_dssp CCEEECTTSC-EEE-ESS--SEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC------
T ss_pred cceeECCCCc-EEE-ccC--cEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC
Confidence 8999999998 665 333 499999876 33343333221
Q ss_pred -----------------------------cceEEEEeCC-CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccc
Q 019059 253 -----------------------------HWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQR 302 (346)
Q Consensus 253 -----------------------------~~v~~v~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (346)
..+..++|+| ++ .+++++ ++.|.+||+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~------------------ 284 (349)
T 1jmx_B 226 PATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQ------------------ 284 (349)
T ss_dssp -CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTT------------------
T ss_pred ccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECcc------------------
Confidence 1345677889 99 788877 88999999998
Q ss_pred ccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 303 ANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 303 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.+..+... ..+.+++|+|+++ .|++++.++.|++||++
T Consensus 285 -~~~~~~~~~~-~~~~~~~~s~dg~-~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 285 -RKLIKAANLD-HTYYCVAFDKKGD-KLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp -TEEEEEEECS-SCCCEEEECSSSS-CEEEESBSSEEEEEETT
T ss_pred -CeEEEEEcCC-CCccceEECCCCC-EEEEecCCCeEEEEecc
Confidence 6665555432 3478999999997 55557888999999985
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=9e-21 Score=183.03 Aligned_cols=293 Identities=8% Similarity=-0.058 Sum_probs=198.1
Q ss_pred eEeeeccCCCCcceEEEeeccc--CCCCeEEEEEecCCCCeEEEeeeeccccce-------EEeeecCCCCceEEEEeec
Q 019059 17 RCISDVKADTDHTSFLTGTLSL--KEENEVHLLRLSSGGTELICEGLFSHPNEI-------WDLSSCPFDQRIFSTVFST 87 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l~~~~~~~ 87 (346)
..+..+.++|++.+++.+.... .....|++|++... . ...+..|...+ ..++|+|+++ ++++.
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g--~--~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~--- 124 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG--E--IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIIST--- 124 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT--E--EEECCCCCEEEETTEECSEEEEECTTCC-EEEEE---
T ss_pred CcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCC--C--eEEcccCCCcccccccccccccCCCCCE-EEEEE---
Confidence 3456677899999998875431 12346777776543 2 45677888888 9999999998 55542
Q ss_pred CCc------ceEEEEecCcccCC----CC------------------------------------CccceeeeeeeccCC
Q 019059 88 GES------YGAAIWQIPELYGQ----LN------------------------------------SPQLERIAALDAHVG 121 (346)
Q Consensus 88 ~~d------~~i~vw~~~~~~~~----~~------------------------------------~~~~~~~~~~~~~~~ 121 (346)
+.+ ..|.+|++...... .. .+.......+..|..
T Consensus 125 ~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~ 204 (1045)
T 1k32_A 125 DAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST 204 (1045)
T ss_dssp CTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred CCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCC
Confidence 322 35667776421100 00 000011233456788
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCC-CCceeeec----------------------------------ccCC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSN-KNAQVQSK----------------------------------QSSG 166 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~----------------------------------~~~~ 166 (346)
.+.++.|+++ .+++++..++.+.+|.+.... ....+... ....
T Consensus 205 ~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~ 282 (1045)
T 1k32_A 205 HVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEI 282 (1045)
T ss_dssp CCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCC
T ss_pred cccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeecc
Confidence 8888999877 345566667888888765311 11110000 0000
Q ss_pred -----------CceeeEEEEeC-CCCCcEEEEecCCeEEEEEccCCCccceee-cc-ceeEEEeCCCCCcEEEEecCCCe
Q 019059 167 -----------MLHYLSGGAWD-PHDVNAVAATCESSVQFWDLRSMGKTNSIE-HA-HVRNVDYDTKKKHLLVTAADESG 232 (346)
Q Consensus 167 -----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~-~v~~~~~~~~~~~~l~~~~~dg~ 232 (346)
+...+..++|+ |+++.+++++ ++.|.+|++..++...... .. .+..++|+ +++ .++.++.+..
T Consensus 283 ~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~-~l~~~s~~~~ 359 (1045)
T 1k32_A 283 GDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV-AFIHGTREGD 359 (1045)
T ss_dssp CCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE-EEEEEETTEE
T ss_pred CcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC-eEEEEECCCc
Confidence 11247788999 9999888877 7889999988765433211 12 28899999 887 6777777778
Q ss_pred EE-EEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc
Q 019059 233 IH-LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS 311 (346)
Q Consensus 233 i~-i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (346)
+. +||+.. . ....+..|...+..++|+|+| ++|++++.++.|++||+.+ ++......
T Consensus 360 l~~~~d~~~-~-~~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~t-------------------g~~~~~~~ 417 (1045)
T 1k32_A 360 FLGIYDYRT-G-KAEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLET-------------------GKPTVIER 417 (1045)
T ss_dssp EEEEEETTT-C-CEEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTT-------------------CCEEEEEE
T ss_pred eEEEEECCC-C-CceEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCC-------------------CceEEecc
Confidence 88 889875 3 344455788899999999999 9999999999999999998 66666666
Q ss_pred cccceeeEEEeCCCCCcEEEEeecC----------CeEEEeeec
Q 019059 312 DYEDSVYGLAWSSREPWIFASLSYD----------GRVRNHMLE 345 (346)
Q Consensus 312 ~~~~~v~~~~~~~~~~~~l~s~~~d----------~~v~vw~~~ 345 (346)
+|...+.+++|+|+|+ .|++++.+ +.|++||++
T Consensus 418 ~~~~~v~~~~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 418 SREAMITDFTISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp CSSSCCCCEEECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCCCccceEECCCCC-eEEEEecCccccccCCCCCeEEEEECC
Confidence 7888899999999998 66666654 489999975
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.7e-21 Score=188.11 Aligned_cols=254 Identities=13% Similarity=0.068 Sum_probs=187.2
Q ss_pred CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec-
Q 019059 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA- 118 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~- 118 (346)
.++...+|.+...+... ..+..|. .+..++|+|+++.++.+ .++.|.+|++. ... +..+..
T Consensus 222 ~dg~~~l~~~~~~g~~~--~~l~~~~-~~~~~~~SpDG~~la~~-----~~~~i~~~d~~---------~~~-l~~l~~~ 283 (1045)
T 1k32_A 222 IDGFGQIYSTDLDGKDL--RKHTSFT-DYYPRHLNTDGRRILFS-----KGGSIYIFNPD---------TEK-IEKIEIG 283 (1045)
T ss_dssp TTSSCEEEEEETTSCSC--EECCCCC-SSCEEEEEESSSCEEEE-----ETTEEEEECTT---------TCC-EEECCCC
T ss_pred ccCceEEEEEeCCCCcc--eEecCCC-CcceeeEcCCCCEEEEE-----eCCEEEEecCC---------ceE-eeeeccC
Confidence 34566677766543322 2333444 46778999999988885 57899999984 111 123322
Q ss_pred ----------cCCceEEEEee-cCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCce-eeEEEEeCCCCCcEEEE
Q 019059 119 ----------HVGKINCVLWW-SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLH-YLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 119 ----------~~~~i~~~~~~-~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~ 186 (346)
|...+.+++|+ |+|+. ++.++ ++.|.+|++.++.. .. ...+.. .+..++|+ +++.++.+
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~S~pdG~~-la~~~-~~~i~~~~~~~~~~-~~-----~~~~~~~~~~~~~~s-dg~~l~~~ 354 (1045)
T 1k32_A 284 DLESPEDRIISIPSKFAEDFSPLDGDL-IAFVS-RGQAFIQDVSGTYV-LK-----VPEPLRIRYVRRGGD-TKVAFIHG 354 (1045)
T ss_dssp CCCBCCSEEEECGGGGEEEEEECGGGC-EEEEE-TTEEEEECTTSSBE-EE-----CSCCSCEEEEEECSS-SEEEEEEE
T ss_pred cccccccccccccccceeeecCCCCCE-EEEEE-cCEEEEEcCCCCce-EE-----ccCCCcceEEeeeEc-CCCeEEEE
Confidence 45578999999 99996 33333 88999999875431 11 123444 78899999 99999999
Q ss_pred ecCCeEE-EEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC
Q 019059 187 TCESSVQ-FWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 187 ~~d~~i~-i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
+.+..+. +||+.+++......... +..++|+|+++ .|++++.++.|++||+.+ +.....+..|...+.+++|+|+|
T Consensus 355 s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTS
T ss_pred ECCCceEEEEECCCCCceEecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCC
Confidence 8888888 99998765433221112 99999999998 888889999999999986 44555565788999999999999
Q ss_pred CcEEEEecCCC----------eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEee
Q 019059 265 DGFILSAGTDS----------TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS 334 (346)
Q Consensus 265 ~~~l~s~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (346)
++|++++.++ .|++||+.+ ++ ...+..|...+..++|+|+|+ .|+..+
T Consensus 433 -~~la~~~~~~~~~~~~~~~~~i~l~d~~~-------------------g~-~~~l~~~~~~~~~~~~spdG~-~l~~~s 490 (1045)
T 1k32_A 433 -RFIAYGFPLKHGETDGYVMQAIHVYDMEG-------------------RK-IFAATTENSHDYAPAFDADSK-NLYYLS 490 (1045)
T ss_dssp -CEEEEEEEECSSTTCSCCEEEEEEEETTT-------------------TE-EEECSCSSSBEEEEEECTTSC-EEEEEE
T ss_pred -CeEEEEecCccccccCCCCCeEEEEECCC-------------------Cc-EEEeeCCCcccCCceEcCCCC-EEEEEe
Confidence 8888776644 899999987 55 566777877889999999998 777888
Q ss_pred cCCeEEEeee
Q 019059 335 YDGRVRNHML 344 (346)
Q Consensus 335 ~d~~v~vw~~ 344 (346)
.++..++|+.
T Consensus 491 ~~~~~~~~~~ 500 (1045)
T 1k32_A 491 YRSLDPSPDR 500 (1045)
T ss_dssp SCCCCCEECS
T ss_pred cccCCcCcch
Confidence 7777777753
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.1e-19 Score=155.00 Aligned_cols=251 Identities=8% Similarity=0.037 Sum_probs=163.0
Q ss_pred eeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEE-EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEec
Q 019059 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELI-CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (346)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (346)
..+.+++++..++++......++.+.+|++......+. ......+......+++ +++.++++ +..++.|.+|++
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~---~~~~~~v~~~~~ 127 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTA---NYSGGSITVFPI 127 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEE---ETTTTEEEEEEB
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEE---ECCCCEEEEEEe
Confidence 33567788887877654322458999999988644333 2333445567777888 77777776 356789999998
Q ss_pred CcccCCCCCccceeeeee-----------eccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCC------Ccee--
Q 019059 99 PELYGQLNSPQLERIAAL-----------DAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK------NAQV-- 159 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~-----------~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~------~~~~-- 159 (346)
.... ....+... ..+...+.+++|+|+|++++++...++.|.+|++..... ....
T Consensus 128 ~~~g------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 128 GQDG------ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp CTTS------CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred CCCC------cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 7311 01111111 112234688999999997555555589999999886542 1110
Q ss_pred eecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCcc--ceee--ccc---eeEEEeCCCCCcEEEEecC-C
Q 019059 160 QSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKT--NSIE--HAH---VRNVDYDTKKKHLLVTAAD-E 230 (346)
Q Consensus 160 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~--~~~~--~~~---v~~~~~~~~~~~~l~~~~~-d 230 (346)
..............++|+|+++++++++ .++.|.+||+.+++.. ..+. ..+ +..++|+|++++++++... +
T Consensus 202 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 202 PEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred ccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 0000111223567899999999888887 5899999999876432 2221 111 6799999999944454545 5
Q ss_pred CeEEEEEcccC-Cc--ceeeecCCCcceEEEEeCCCCCcEEEEec-CCCeEEEEecC
Q 019059 231 SGIHLWDLRML-KA--PIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVS 283 (346)
Q Consensus 231 g~i~i~d~~~~-~~--~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-~d~~i~iwd~~ 283 (346)
+.|.+|++... +. .+..+.. ...+..++|+|+| ++|++++ .++.|.+|++.
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEEE
Confidence 89999999621 22 2333443 4577899999999 7777666 67899997665
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=3.4e-20 Score=157.32 Aligned_cols=248 Identities=8% Similarity=0.081 Sum_probs=165.3
Q ss_pred ccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcc
Q 019059 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL 101 (346)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~ 101 (346)
+.+++++. +++.... ..++.+.+|++... .......+..+...+..++|+|+++.|+++. ..++.|.+|++..
T Consensus 45 ~a~spdg~-l~~~~~~-~~~~~v~~~~~~~g-~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~---~~~~~v~v~~~~~- 117 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKE-DDEGGIAAWQIDGQ-TAHKLNTVVAPGTPPAYVAVDEARQLVYSAN---YHKGTAEVMKIAA- 117 (347)
T ss_dssp EEECTTCE-EEEEEEE-TTEEEEEEEEEETT-EEEEEEEEEEESCCCSEEEEETTTTEEEEEE---TTTTEEEEEEECT-
T ss_pred EEEccCCe-EEEEEec-CCCceEEEEEecCC-cEEEeeeeecCCCCCEEEEECCCCCEEEEEe---CCCCEEEEEEeCC-
Confidence 55677776 5544321 23578999999543 2223344456778889999999999888863 4678999999862
Q ss_pred cCCCCCccceeeeeeec---------cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeE
Q 019059 102 YGQLNSPQLERIAALDA---------HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLS 172 (346)
Q Consensus 102 ~~~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~ 172 (346)
......+..+.. +...+.+++|+|+|+ ++++...++.|.+|++............. ........
T Consensus 118 -----~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~ 190 (347)
T 3hfq_A 118 -----DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLT-MEAGFGPR 190 (347)
T ss_dssp -----TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEE-CCTTCCEE
T ss_pred -----CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEE-cCCCCCCc
Confidence 112233333321 123488999999999 56666668899999998332222211111 11112567
Q ss_pred EEEeCCCCCcEEEEe-cCCeEEEEEccC--CCc--cceee---cc----c-eeEEEeCCCCCcEEEEecCCCeEEEEEcc
Q 019059 173 GGAWDPHDVNAVAAT-CESSVQFWDLRS--MGK--TNSIE---HA----H-VRNVDYDTKKKHLLVTAADESGIHLWDLR 239 (346)
Q Consensus 173 ~~~~~~~~~~l~~~~-~d~~i~i~d~~~--~~~--~~~~~---~~----~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 239 (346)
.++|+|+++++++++ .++.|.+|++.. ++. ...+. .. . +..++|+|++++++++...++.|.+||+.
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 899999999777755 578999999885 332 11111 11 2 78899999999555677778999999987
Q ss_pred cCC--cceeeecCCCcceEEEEeCCCCCcEEEEecC-CCeEEEEecCC
Q 019059 240 MLK--APIQELPGHTHWTWAVCCNPEYDGFILSAGT-DSTVNLWLVST 284 (346)
Q Consensus 240 ~~~--~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~-d~~i~iwd~~~ 284 (346)
..+ ..+..+..+...+..++|+|+| ++|++++. ++.|.+|++..
T Consensus 271 ~~g~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 271 ADGHLTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp GGGCEEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEECT
T ss_pred CCCcEEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEEeC
Confidence 322 2445555566678999999999 77777665 58999996643
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=1.7e-21 Score=181.23 Aligned_cols=234 Identities=8% Similarity=-0.031 Sum_probs=160.7
Q ss_pred EEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCC---ceEEEEeecCCCCcEEEEe-----
Q 019059 69 WDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG---KINCVLWWSSGRHDKLVSI----- 140 (346)
Q Consensus 69 ~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~----- 140 (346)
.+++|+|+++ +++. +.|+.|++||+. .++....+..|.. .+.+++|||||+.+++++.
T Consensus 19 ~~~~~s~dg~-~~~~----~~d~~i~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQE-YLHQ----SADNNIVLYNIE---------TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSE-EEEE----CTTSCEEEEESS---------SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred CccEECCCCe-EEEE----cCCCCEEEEEcC---------CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeE
Confidence 3789999995 4443 468899999998 5555555544433 3899999999996444432
Q ss_pred ---cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---e---
Q 019059 141 ---DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---V--- 211 (346)
Q Consensus 141 ---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v--- 211 (346)
.++.|++||+.+++....... ...+..++|+|||+.|+.+. ++.|++||+.+++.......++ +
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred EeecceEEEEEECCCCccccceec------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 168999999987653100000 12578899999999999885 7899999998877644322222 2
Q ss_pred --------------eEEEeCCCCCcEEEEecCCC----------------------------------eEEEEEcccCCc
Q 019059 212 --------------RNVDYDTKKKHLLVTAADES----------------------------------GIHLWDLRMLKA 243 (346)
Q Consensus 212 --------------~~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~ 243 (346)
.+++|+|||+ .|++++.|. .|++||+.. +.
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~ 235 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PA 235 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HH
T ss_pred cccceeeeecccCcccEEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CC
Confidence 5899999999 677665432 788999875 32
Q ss_pred ce--------eeecCCCcceEEEEeCCCCCcEEEEecCC----CeEEEEe----cCCCCCCCCCcccccCCccccccccc
Q 019059 244 PI--------QELPGHTHWTWAVCCNPEYDGFILSAGTD----STVNLWL----VSTSNHDELPSESLVESPNQRANSLL 307 (346)
Q Consensus 244 ~~--------~~~~~~~~~v~~v~~~~~~~~~l~s~~~d----~~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (346)
.. ..+..|...+..++|+|++ +++++.... ..|.+|| ..+ +++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~-------------------g~~~ 295 (719)
T 1z68_A 236 YVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQT-------------------WDCP 295 (719)
T ss_dssp HHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSS-------------------EECC
T ss_pred ccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCC-------------------CceE
Confidence 21 2234688889999999998 877774432 2488889 766 5555
Q ss_pred ccc----ccccceee-----EEEeCCCCCcEEE-EeecCC--eEEEeeec
Q 019059 308 NSY----SDYEDSVY-----GLAWSSREPWIFA-SLSYDG--RVRNHMLE 345 (346)
Q Consensus 308 ~~~----~~~~~~v~-----~~~~~~~~~~~l~-s~~~d~--~v~vw~~~ 345 (346)
..+ .+|...+. .+.|+|+|+.+++ +...++ .|.+|+++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~ 345 (719)
T 1z68_A 296 KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDT 345 (719)
T ss_dssp GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSC
T ss_pred EEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECC
Confidence 555 35666666 8999999985444 344555 45555553
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=2.1e-20 Score=157.63 Aligned_cols=221 Identities=9% Similarity=0.075 Sum_probs=155.8
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCC--ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVG--KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
+.++.|.+||+. ..+.+..+..... .+..++|+|+++.+++++..++.|.+||+.+++....+......
T Consensus 8 ~~~~~v~~~d~~---------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 8 ARPDKLVVIDTE---------KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp ETTTEEEEEETT---------TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred CCCCeEEEEECC---------CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 578899999998 5666666643322 57899999999865566666899999999876643333221111
Q ss_pred CCceeeEEEEeCCCCCcEEEEe------------cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCe
Q 019059 166 GMLHYLSGGAWDPHDVNAVAAT------------CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESG 232 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~ 232 (346)
.+...+..++|+|+++.++++. .++.|.+||+.+++....+..+. +.+++|+|+++ .++++ ++.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~ 155 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS-KLYGL--GRD 155 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSS-CEEEE--SSS
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCC-EEEEe--CCe
Confidence 1122567899999999988886 57999999999888777766544 88999999998 55555 578
Q ss_pred EEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec-CCC-----------------------eEEEEecCCCCCC
Q 019059 233 IHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDS-----------------------TVNLWLVSTSNHD 288 (346)
Q Consensus 233 i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-~d~-----------------------~i~iwd~~~~~~~ 288 (346)
|++||+.+ ...+..+..+.. ...+.|+|++ ..++..+ .++ .|.+||+.+
T Consensus 156 i~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---- 228 (337)
T 1pby_B 156 LHVMDPEA-GTLVEDKPIQSW-EAETYAQPDV-LAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET---- 228 (337)
T ss_dssp EEEEETTT-TEEEEEECSTTT-TTTTBCCCBC-CCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT----
T ss_pred EEEEECCC-CcEeeeeecccc-CCCceeCCCc-cEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC----
Confidence 99999987 445555554331 1234789999 5454433 333 368888887
Q ss_pred CCCcccccCCccccccccc-cccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 289 ELPSESLVESPNQRANSLL-NSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.. ..+..+...+.+++|+|+++ .++++ ++.|++||++
T Consensus 229 ---------------~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~--~~~v~~~d~~ 268 (337)
T 1pby_B 229 ---------------GEMAMREVRIMDVFYFSTAVNPAKT-RAFGA--YNVLESFDLE 268 (337)
T ss_dssp ---------------CCEEEEEEEECSSCEEEEEECTTSS-EEEEE--ESEEEEEETT
T ss_pred ---------------CCceEeecCCCCCceeeEEECCCCC-EEEEe--CCeEEEEECC
Confidence 4332 22334555688999999997 55555 7999999975
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=2.1e-19 Score=152.31 Aligned_cols=230 Identities=9% Similarity=0.005 Sum_probs=155.6
Q ss_pred CCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccc-cceEEeeecCCCCceEEEEeecCCcceEEEEecCccc
Q 019059 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELY 102 (346)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~ 102 (346)
...+...++.+ ..++.|.+|+.... ... ..+..+. ..+..++|+|+++.++++ +..++.|.+||+.
T Consensus 7 ~~~~~~~~v~~----~~~~~v~~~d~~~~--~~~-~~~~~~~~~~~~~~~~s~dg~~~~v~---~~~~~~i~~~d~~--- 73 (349)
T 1jmx_B 7 LKAGHEYMIVT----NYPNNLHVVDVASD--TVY-KSCVMPDKFGPGTAMMAPDNRTAYVL---NNHYGDIYGIDLD--- 73 (349)
T ss_dssp CCTTCEEEEEE----ETTTEEEEEETTTT--EEE-EEEECSSCCSSCEEEECTTSSEEEEE---ETTTTEEEEEETT---
T ss_pred ccCCCEEEEEe----CCCCeEEEEECCCC--cEE-EEEecCCCCCCceeEECCCCCEEEEE---eCCCCcEEEEeCC---
Confidence 33444445544 34689999987653 222 2222222 257899999999877765 3567899999987
Q ss_pred CCCCCccceeeeeeeccC------CceEEEEeecCCCCcEEEEec-----------CCeEEEEEcCCCCCCceeeecccC
Q 019059 103 GQLNSPQLERIAALDAHV------GKINCVLWWSSGRHDKLVSID-----------EENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~~~~~~~-----------d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
..+.+..+..+. ..+.+++|+|+|++++++... ++.|.+||+.+++.........
T Consensus 74 ------t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-- 145 (349)
T 1jmx_B 74 ------TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-- 145 (349)
T ss_dssp ------TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--
T ss_pred ------CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--
Confidence 556555554322 237889999999964444332 4899999998643222211111
Q ss_pred CCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc------------------------------------
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA------------------------------------ 209 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------------------------ 209 (346)
+...+.+++|+|+++ +++++ +.|.+||+.+++....+..+
T Consensus 146 -~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 146 -MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp -CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred -CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 122578899999999 66654 34999999887754433211
Q ss_pred ----------------------------------ceeEEEeCC-CCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcc
Q 019059 210 ----------------------------------HVRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHW 254 (346)
Q Consensus 210 ----------------------------------~v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 254 (346)
.+.+++|+| +++ .++++ ++.|.+||+.+ .+.+..+. ....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~-~~~~~~~~-~~~~ 296 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQ-RKLIKAAN-LDHT 296 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTT-TEEEEEEE-CSSC
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECcc-CeEEEEEc-CCCC
Confidence 034667789 888 66666 78999999987 44555554 3345
Q ss_pred eEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 255 TWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 255 v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+.+++|+|++ .+|++++.++.|++||+.+
T Consensus 297 ~~~~~~s~dg-~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 297 YYCVAFDKKG-DKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CCEEEECSSS-SCEEEESBSSEEEEEETTT
T ss_pred ccceEECCCC-CEEEEecCCCeEEEEeccc
Confidence 7899999999 7777788899999999987
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.3e-20 Score=172.61 Aligned_cols=278 Identities=11% Similarity=0.072 Sum_probs=176.3
Q ss_pred eccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeecccc---ceEEeeecCCCCceEEEEeec-----CCcce
Q 019059 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPN---EIWDLSSCPFDQRIFSTVFST-----GESYG 92 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~~~~~~~-----~~d~~ 92 (346)
...+.+++ +++... .++.+++|++...... ..+..|.. .+.+++|||||+.|+.+.... +.++.
T Consensus 20 ~~~~s~dg-~~~~~~----~d~~i~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS----ADNNIVLYNIETGQSY---TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCEESSSS-EEEEEC----TTSCEEEEESSSCCEE---EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccEECCCC-eEEEEc----CCCCEEEEEcCCCcEE---EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 44556677 455543 3678999988765421 22223333 389999999999998864211 22689
Q ss_pred EEEEecCcccCCCCCccceee--eeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC-----
Q 019059 93 AAIWQIPELYGQLNSPQLERI--AALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS----- 165 (346)
Q Consensus 93 i~vw~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----- 165 (346)
|.+||+. .++.+ ..+ ...+..++|+|||+. ++.+ .++.|++|++.+++... +......
T Consensus 92 i~~~d~~---------~g~~~~~~~l---~~~~~~~~~SPDG~~-la~~-~~~~i~~~~~~~g~~~~-l~~~~~~~~v~~ 156 (719)
T 1z68_A 92 YYIYDLS---------NGEFVRGNEL---PRPIQYLCWSPVGSK-LAYV-YQNNIYLKQRPGDPPFQ-ITFNGRENKIFN 156 (719)
T ss_dssp EEEEETT---------TTEECCSSCC---CSSBCCEEECSSTTC-EEEE-ETTEEEEESSTTSCCEE-CCCCCBTTTEEE
T ss_pred EEEEECC---------CCccccceec---CcccccceECCCCCE-EEEE-ECCeEEEEeCCCCCcEE-EecCCCcCCeEc
Confidence 9999997 34432 222 246889999999996 3333 48899999998765322 1111100
Q ss_pred CCc---------eeeEEEEeCCCCCcEEEEecCC----------------------------------eEEEEEccCCCc
Q 019059 166 GML---------HYLSGGAWDPHDVNAVAATCES----------------------------------SVQFWDLRSMGK 202 (346)
Q Consensus 166 ~~~---------~~v~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~ 202 (346)
++. ....+++|+|||+.|++++.|. .|++||+.+++.
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 111 1125899999999999887542 788999998764
Q ss_pred c--ceee-----ccc---eeEEEeCCCCCcEEEEecC--C--CeEEEEE----cccCCcceeee----cCCCcceE----
Q 019059 203 T--NSIE-----HAH---VRNVDYDTKKKHLLVTAAD--E--SGIHLWD----LRMLKAPIQEL----PGHTHWTW---- 256 (346)
Q Consensus 203 ~--~~~~-----~~~---v~~~~~~~~~~~~l~~~~~--d--g~i~i~d----~~~~~~~~~~~----~~~~~~v~---- 256 (346)
. ..+. .++ +..++|+|++. ++++... + ..|.+|| +.+ +.....+ ..|...+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 314 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFV 314 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSC
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccC
Confidence 3 1111 122 89999999976 6666332 2 2488889 654 3333334 36677776
Q ss_pred -EEEeCCCCCcEEE--EecCCC--eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEE
Q 019059 257 -AVCCNPEYDGFIL--SAGTDS--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFA 331 (346)
Q Consensus 257 -~v~~~~~~~~~l~--s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 331 (346)
.+.|+|+| ..|+ +...++ .|.+||+.. ++ ...+..+...+..+.++ +++.+++
T Consensus 315 ~~~~~spdg-~~l~~~~~~~~g~~~l~~~~~~~-------------------~~-~~~lt~~~~~v~~~~~~-d~~~i~~ 372 (719)
T 1z68_A 315 STPVFSYDA-ISYYKIFSDKDGYKHIHYIKDTV-------------------EN-AIQITSGKWEAINIFRV-TQDSLFY 372 (719)
T ss_dssp CCCEECTTS-SCEEEEEECTTSCEEEEEESSCS-------------------TT-CEECSCSSSCEEEEEEE-CSSEEEE
T ss_pred CccEECCCC-CeEEEEEEccCCceEEEEEECCC-------------------Cc-eEecccCceEEEEEEEE-eCCEEEE
Confidence 88999999 5443 344555 566667665 33 34455555557777777 7775555
Q ss_pred Eeec----CCeEEEeeec
Q 019059 332 SLSY----DGRVRNHMLE 345 (346)
Q Consensus 332 s~~~----d~~v~vw~~~ 345 (346)
++.. ++..++|.++
T Consensus 373 ~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 373 SSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EESCGGGCTTCBEEEEEE
T ss_pred EEecCCCCCceEEEEEEe
Confidence 5544 4788888763
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=2.7e-18 Score=144.49 Aligned_cols=243 Identities=9% Similarity=0.054 Sum_probs=173.0
Q ss_pred ccceEEeeecCCCCceEEEEeecCCc------------------------ceEEEEecCcccCCCCCccceeeeeee-cc
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGES------------------------YGAAIWQIPELYGQLNSPQLERIAALD-AH 119 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~~~-~~ 119 (346)
-+.+.+++++|+++.+++. ..+ +.|.+||.. +++.+..+. .+
T Consensus 23 l~~v~~va~d~~G~l~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---------~g~~~~~~~~~~ 89 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFH----RGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---------NAEILQSSGKNL 89 (329)
T ss_dssp CSCEEEEEECTTCCEEEEE----CTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---------TCCEEEEECTTT
T ss_pred cCCceEEEECCCCCEEEEe----CCCCeEEeeccCcceeecccccccccCCcEEEEECC---------CCeEEeccCCCc
Confidence 3679999999998766654 233 468999976 455554443 33
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec-c----cCCCceeeEEEEeCC-CCCcEEEEe-cCCeE
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-Q----SSGMLHYLSGGAWDP-HDVNAVAAT-CESSV 192 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-~----~~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i 192 (346)
-.....++++++|+ ++++...++.|++||............. . ..++.....+++++| ++..+++.+ .++.|
T Consensus 90 ~~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 90 FYLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred cCCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 45788999999998 5666666899999998643212222111 0 023344688999999 666666665 58999
Q ss_pred EEEEccCCCccceee---------ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec--CCCcceEEE
Q 019059 193 QFWDLRSMGKTNSIE---------HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAV 258 (346)
Q Consensus 193 ~i~d~~~~~~~~~~~---------~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~v 258 (346)
++|| .+++....+. .++ +..++++|++..++++...++.|++||..+ .+.+..+. .+...+..+
T Consensus 169 ~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 169 VQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEE
T ss_pred EEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCccee
Confidence 9999 4566555442 112 899999999444888888899999999985 44566653 455678899
Q ss_pred EeCCCCCcEEEE-------ecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccc---ccccceeeEEEeCCCCCc
Q 019059 259 CCNPEYDGFILS-------AGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSY---SDYEDSVYGLAWSSREPW 328 (346)
Q Consensus 259 ~~~~~~~~~l~s-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~ 328 (346)
+++| + ..+.+ ...+..|++||..+ ++.+..+ ..+...+.+|+++|+|.
T Consensus 247 ~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~-------------------g~~~~~~~~~~~~~~~p~~ia~~~dG~- 304 (329)
T 3fvz_A 247 SYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSS-------------------GEIIDVFKPVRKHFDMPHDIVASEDGT- 304 (329)
T ss_dssp EEET-T-EEEEEECCCCTTCSCCCCEEEEETTT-------------------CCEEEEECCSSSCCSSEEEEEECTTSE-
T ss_pred eecC-C-EEEEeCCCEEeccCCCcEEEEEEcCC-------------------CeEEEEEcCCCCccCCeeEEEECCCCC-
Confidence 9999 4 33333 33455899999987 6766665 35666789999999994
Q ss_pred EEEEeecCCeEEEeeec
Q 019059 329 IFASLSYDGRVRNHMLE 345 (346)
Q Consensus 329 ~l~s~~~d~~v~vw~~~ 345 (346)
++++...+++|++|+++
T Consensus 305 lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 305 VYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEEESSSCCEEEEEEE
T ss_pred EEEEECCCCEEEEEeCC
Confidence 99999999999999985
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=4.4e-19 Score=152.75 Aligned_cols=278 Identities=10% Similarity=0.017 Sum_probs=173.6
Q ss_pred ccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcc
Q 019059 22 VKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPEL 101 (346)
Q Consensus 22 ~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~ 101 (346)
..+++++.++++.... ....+++++++... ... ....++...+..++|+|+++.|+.+ +.++.|.+||+.
T Consensus 41 ~~~SpDg~~l~~~~~~-~g~~~l~~~d~~~g--~~~-~lt~~~~~~~~~~~~spdg~~l~~~----~~~~~l~~~d~~-- 110 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF-DGPWNYYLLDLNTQ--VAT-QLTEGRGDNTFGGFLSPDDDALFYV----KDGRNLMRVDLA-- 110 (388)
T ss_dssp CCBCTTSCEEEEEECT-TSSCEEEEEETTTC--EEE-ECCCSSCBCSSSCEECTTSSEEEEE----ETTTEEEEEETT--
T ss_pred ccCCCCCCEEEEEEcC-CCCceEEEEeCCCC--ceE-EeeeCCCCCccceEEcCCCCEEEEE----eCCCeEEEEECC--
Confidence 4578899988887531 12235666665543 222 3334455556678999999999886 366799999998
Q ss_pred cCCCCCccceeeeeeeccCCceEEEE--eecCCCCcEEEE----------------------ecCCeEEEEEcCCCCCCc
Q 019059 102 YGQLNSPQLERIAALDAHVGKINCVL--WWSSGRHDKLVS----------------------IDEENIFLWSLDCSNKNA 157 (346)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~----------------------~~d~~i~vwd~~~~~~~~ 157 (346)
.++....+..+...+.... ++++++. ++.. ..+..|.+||+.+++. .
T Consensus 111 -------~g~~~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-~ 181 (388)
T 3pe7_A 111 -------TLEENVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-T 181 (388)
T ss_dssp -------TCCEEEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-E
T ss_pred -------CCcceeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-E
Confidence 4454444555555554444 4788884 3221 1246899999987642 2
Q ss_pred eeeecccCCCceeeEEEEeCC-CCCcEEEEecC------CeEEEEEccCCCccceeecc--c-eeEEEeCCCCCcEEEEe
Q 019059 158 QVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE------SSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 158 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~ 227 (346)
.+.. +...+..++|+| +++.|+....+ ..|.++|+..++........ . +..++|+|+|+.+++++
T Consensus 182 ~l~~-----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 182 VILQ-----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEE-----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred Eeec-----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 2222 122578899999 99988877653 37888888765433222222 2 77899999998444444
Q ss_pred cCCC----eEEEEEcccCCc-ceeeecCCCcc---eEEEEeCCCCCcEEEEe---------cCCCeEEEEecCCCCCCCC
Q 019059 228 ADES----GIHLWDLRMLKA-PIQELPGHTHW---TWAVCCNPEYDGFILSA---------GTDSTVNLWLVSTSNHDEL 290 (346)
Q Consensus 228 ~~dg----~i~i~d~~~~~~-~~~~~~~~~~~---v~~v~~~~~~~~~l~s~---------~~d~~i~iwd~~~~~~~~~ 290 (346)
..++ .|++||+..... .+..+..+... ...+.|+|+| ..|+.. ..+..|++||+.+
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~------ 329 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDG-SDAPVDVQDDSGYKIENDPFLYVFNMKN------ 329 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEE-CCC------------CCCCEEEEEETTT------
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCC-CcceeEeeeccccccCCCCEEEEEeccC------
Confidence 3322 399999986331 22223221111 1224799999 655543 4566899999987
Q ss_pred CcccccCCccccccccccccccccc-----------eeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 291 PSESLVESPNQRANSLLNSYSDYED-----------SVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
++. ..+..+.. .+.+++|+|+|+.++++...++...||.+
T Consensus 330 -------------~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 330 -------------GTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp -------------TEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred -------------Cce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 332 33444443 47889999999866666667887777765
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=3.2e-17 Score=135.15 Aligned_cols=236 Identities=11% Similarity=0.106 Sum_probs=165.2
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee------ccCCceEEEEee-cCCCCc
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD------AHVGKINCVLWW-SSGRHD 135 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~-~~~~~~ 135 (346)
++-..+.+++++|++..+++. ..++.|.+|+.. .+.+..+. .+...+..+++. +++. +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~----~~~~~i~~~d~~----------g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l 91 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVAD----TNNHRIQIFDKE----------GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-I 91 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEE----GGGTEEEEECTT----------SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-E
T ss_pred CccCCCceEEECCCCCEEEEE----CCCCEEEEECCC----------CcEEEEecccCCCcccccCceEEEEEcCCCe-E
Confidence 455678999999988755553 567899999975 23333332 234568899995 5665 4
Q ss_pred EEEEec-CCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec-cc---
Q 019059 136 KLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH-AH--- 210 (346)
Q Consensus 136 ~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~--- 210 (346)
+++... ++.|.+||.. ++....+ . ..+...+.+++++|+++.+++...++.|.+||.. ++....+.. .+
T Consensus 92 ~v~~~~~~~~i~~~d~~-g~~~~~~-~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~ 165 (286)
T 1q7f_A 92 IVTERSPTHQIQIYNQY-GQFVRKF-G---ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEF 165 (286)
T ss_dssp EEEECGGGCEEEEECTT-SCEEEEE-C---TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSS
T ss_pred EEEcCCCCCEEEEECCC-CcEEEEe-c---CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCC
Confidence 444433 7899999943 3322221 1 1223367899999999866666678899999965 454444432 22
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC--CcceEEEEeCCCCCcEEEEecCCC-eEEEEecCCCCC
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--THWTWAVCCNPEYDGFILSAGTDS-TVNLWLVSTSNH 287 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~ 287 (346)
+..++++|++. ++++...++.|++||.. ...+..+..+ ...+..++++++| .++++...++ .|.+||..
T Consensus 166 p~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~---- 237 (286)
T 1q7f_A 166 PNGVVVNDKQE-IFISDNRAHCVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD---- 237 (286)
T ss_dssp EEEEEECSSSE-EEEEEGGGTEEEEEETT--CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT----
T ss_pred cEEEEECCCCC-EEEEECCCCEEEEEcCC--CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC----
Confidence 89999999997 88887888999999975 3345555433 3678999999999 8888887776 99999965
Q ss_pred CCCCcccccCCcccccccccccccccc--ceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 288 DELPSESLVESPNQRANSLLNSYSDYE--DSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++.+..+..+. ..+.+++++|+|. ++++ +.|++|++|++.
T Consensus 238 ----------------g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 238 ----------------GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp ----------------SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECS
T ss_pred ----------------CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcc
Confidence 34444444332 2378999999996 7777 579999999874
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=6.7e-18 Score=144.22 Aligned_cols=247 Identities=8% Similarity=-0.039 Sum_probs=153.9
Q ss_pred eccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCce-EEEEe------ecC----C
Q 019059 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRI-FSTVF------STG----E 89 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~------~~~----~ 89 (346)
.+.+++++..++++.. + .+.+|++...+..........+ +.+.+++|+|+++.+ +.++. .+. .
T Consensus 44 ~~a~spdg~~l~~~~~----~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 44 WMTFDHERKNIYGAAM----K-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp EEEECTTSSEEEEEEB----T-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred EEEECCCCCEEEEEcc----c-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 4556777777766543 2 7889998733322211111111 346679999999863 33320 001 5
Q ss_pred cceEEEEecCcccCCCCCccceeeeeee----ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcC-CCCCCceeeeccc
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAALD----AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLD-CSNKNAQVQSKQS 164 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~~~ 164 (346)
++.+.+|++.. .++....+. .+...+.+++|+|+|++++++...++.|++|+++ +++.. .......
T Consensus 118 ~g~v~v~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~-~~~~~~~ 188 (365)
T 1jof_A 118 AGYGNVFSVSE--------TGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE-LVGSVDA 188 (365)
T ss_dssp CCEEEEEEECT--------TCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE-EEEEEEC
T ss_pred CceEEEEccCC--------CCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE-EeeeEec
Confidence 78899999862 122222222 2456789999999999633333346899999998 44321 1111111
Q ss_pred CCCceeeEEEEeCCCCCcEEEEec-CCeEEEEEcc--CCCccc------eeec-----c-------ceeEEE-eCCCCCc
Q 019059 165 SGMLHYLSGGAWDPHDVNAVAATC-ESSVQFWDLR--SMGKTN------SIEH-----A-------HVRNVD-YDTKKKH 222 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~~------~~~~-----~-------~v~~~~-~~~~~~~ 222 (346)
..+...+..++|+|+++.+++++. ++.|.+|++. +++... .+.. . .+..++ |+|+|+
T Consensus 189 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~- 267 (365)
T 1jof_A 189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK- 267 (365)
T ss_dssp SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-
T ss_pred CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-
Confidence 111236889999999999888875 7899999875 454321 1111 1 367899 999998
Q ss_pred EEEEecC-CC-----eEEEEEcccCCccee---eecCCCcceEEEEeCC---CCCcEEEEecC-CCeEEEEecCC
Q 019059 223 LLVTAAD-ES-----GIHLWDLRMLKAPIQ---ELPGHTHWTWAVCCNP---EYDGFILSAGT-DSTVNLWLVST 284 (346)
Q Consensus 223 ~l~~~~~-dg-----~i~i~d~~~~~~~~~---~~~~~~~~v~~v~~~~---~~~~~l~s~~~-d~~i~iwd~~~ 284 (346)
.|+++.. +. .|.+|++...+.... ....+...+..++|+| +| ++|++++. ++.|.+|++..
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEET
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEch
Confidence 4444433 23 899999963233222 1333455677889999 78 88888876 48999999986
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=8.1e-19 Score=163.52 Aligned_cols=235 Identities=8% Similarity=0.024 Sum_probs=155.0
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCc-----eEEEEeecCCCCcEEEEec
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGK-----INCVLWWSSGRHDKLVSID 141 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~ 141 (346)
....++|+|+++.+++ + |+.|++||+. +++....+..|... ...+.|||||+++++ ++.
T Consensus 18 ~~~~~~w~~dg~~~~~-----~-~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~-~~~ 81 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYK-----Q-ENNILVFNAE---------YGNSSVFLENSTFDEFGHSINDYSISPDGQFILL-EYN 81 (740)
T ss_dssp CCCCEEECSSSEEEEE-----E-TTEEEEEETT---------TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEE-EEE
T ss_pred cccccEECCCCcEEEE-----c-CCcEEEEECC---------CCceEEEEechhhhhhcccccceEECCCCCEEEE-EEC
Confidence 4568999999966555 2 7899999998 45555556666432 244789999996444 333
Q ss_pred C---------CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc--
Q 019059 142 E---------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-- 210 (346)
Q Consensus 142 d---------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-- 210 (346)
+ +.+.+||+.+++.. .+ ..+...+...+|+|||+.|+.+ .++.|++||+.+++..+....++
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~~~~-~l-----~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~ 154 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKRQLI-TE-----ERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKED 154 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTTEEC-CS-----SCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTT
T ss_pred CeeeEEEccceEEEEEECCCCcEE-Ec-----ccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCcc
Confidence 3 67789999876532 11 1233468899999999999887 47899999998876543222122
Q ss_pred -e-----------------eEEEeCCCCCcEEEEecCC-C-----------------------------------eEEEE
Q 019059 211 -V-----------------RNVDYDTKKKHLLVTAADE-S-----------------------------------GIHLW 236 (346)
Q Consensus 211 -v-----------------~~~~~~~~~~~~l~~~~~d-g-----------------------------------~i~i~ 236 (346)
+ ..+.|+|||+ .|+.++.| + .|++|
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~ 233 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVV 233 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEE
T ss_pred ceecCcccccccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEE
Confidence 1 3489999999 56554321 1 57788
Q ss_pred Eccc---CCc-ceeeec------CCCcceEEEEeCCCCCcEEEEec----CCCeEEEEecCCCCCCCCCcccccCCcccc
Q 019059 237 DLRM---LKA-PIQELP------GHTHWTWAVCCNPEYDGFILSAG----TDSTVNLWLVSTSNHDELPSESLVESPNQR 302 (346)
Q Consensus 237 d~~~---~~~-~~~~~~------~~~~~v~~v~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (346)
|+.. ... ....+. +|...+..++|+|+| ++++... .+..|++||+.+
T Consensus 234 d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~t------------------ 294 (740)
T 4a5s_A 234 NTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDE------------------ 294 (740)
T ss_dssp ETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEET------------------
T ss_pred ECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCC------------------
Confidence 8875 321 223333 377789999999999 7555442 234799999987
Q ss_pred ccc----c--cccc--ccccceee-----EEEeCCCCCcEEEEee-cCC--eEEEeeec
Q 019059 303 ANS----L--LNSY--SDYEDSVY-----GLAWSSREPWIFASLS-YDG--RVRNHMLE 345 (346)
Q Consensus 303 ~~~----~--~~~~--~~~~~~v~-----~~~~~~~~~~~l~s~~-~d~--~v~vw~~~ 345 (346)
++ + +..+ ..|..+|. .+.|+|||+.++...+ .+| .|++|+++
T Consensus 295 -g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 295 -SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp -TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred -CccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 43 1 2222 34555554 7899999984442554 344 57777764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=3.5e-18 Score=157.52 Aligned_cols=252 Identities=10% Similarity=-0.039 Sum_probs=163.8
Q ss_pred EeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceE---------EEEe
Q 019059 58 CEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKIN---------CVLW 128 (346)
Q Consensus 58 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~---------~~~~ 128 (346)
...+.+|...+..++|+++. ++.+....+.++...||... .......+..+...+. ...|
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~~~~~~l~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 84 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDE--VWWVAPRPAEAGRATLVRRR---------ADGAEESALPAPWNVRNRVFEYSGFPWAG 84 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTE--EEEEEEETTTTTEEEEEEEC---------TTSCEEESSCTTCCBCCCGGGTCCCCEEE
T ss_pred HHHHhhcCCccceeEEcCCe--EEEEecCcccCCcEEEEEEC---------CCCCcceeCCCCccccccccccCCcccee
Confidence 34566788999999999764 33332223567789999864 2233445555655555 5666
Q ss_pred e--cCCCC-cEEEEecCCeEEEEEcC--CCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC----------CeEE
Q 019059 129 W--SSGRH-DKLVSIDEENIFLWSLD--CSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE----------SSVQ 193 (346)
Q Consensus 129 ~--~~~~~-~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~ 193 (346)
+ |||+. ++++...+..|.++++. +......+.......+...+..++|+|||+.|++++.+ ..|+
T Consensus 85 ~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 85 VPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp ECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred eeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 6 99996 44444345677777765 20222222221111144578899999999999988876 5899
Q ss_pred EEEccC------CCccceee-ccc--eeEEEeCCCCCcEEEEecCC--------CeEEEEEcccCC---cceeeecCCCc
Q 019059 194 FWDLRS------MGKTNSIE-HAH--VRNVDYDTKKKHLLVTAADE--------SGIHLWDLRMLK---APIQELPGHTH 253 (346)
Q Consensus 194 i~d~~~------~~~~~~~~-~~~--v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~---~~~~~~~~~~~ 253 (346)
+||+.+ ++. ..+. ..+ +..++|+|||+ .|+.++.+ ..|++||+...+ ........|..
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred EEECCCCccccCCce-eEEEecCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 999987 443 3333 233 88899999999 56555433 479999998313 33333344578
Q ss_pred ceEEEEeCCCCCcEEEEecCCC--eEEEEecCCCCCCCCCcccccCCccccccccccccccccce--------eeEEEeC
Q 019059 254 WTWAVCCNPEYDGFILSAGTDS--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDS--------VYGLAWS 323 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------v~~~~~~ 323 (346)
.+..+.|+|+| +++++++.++ .|.+||+.. ++.......+... +..++|+
T Consensus 243 ~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~-------------------~~~~~l~~~~~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 243 AIAQAEWAPDG-SLIVATDRTGWWNLHRVDPAT-------------------GAATQLCRREEEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp CEEEEEECTTS-CEEEEECTTSSCEEEEECTTT-------------------CCEEESSCCSSBSSCCCCSTTCCSEEEC
T ss_pred eEcceEECCCC-eEEEEECCCCCeEEEEEECCC-------------------CceeecccccccccCccccccCceEeEe
Confidence 89999999999 6888888888 566666544 2222222222211 4678899
Q ss_pred CCCCcEEEEeecCCeEEEeee
Q 019059 324 SREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 324 ~~~~~~l~s~~~d~~v~vw~~ 344 (346)
|++. ++++++. +.++||.+
T Consensus 303 ~~~~-~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 303 ANGL-IAVVHGK-GAAVLGIL 321 (662)
T ss_dssp TTSC-EEEEEBS-SSCEEEEE
T ss_pred CCCE-EEEEEEc-CccEEEEE
Confidence 9886 8888888 99999944
No 168
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=9.9e-17 Score=148.84 Aligned_cols=287 Identities=10% Similarity=0.060 Sum_probs=180.9
Q ss_pred CCcceEEEeecccCC-CCeEEEEEecCCCCeEEEe--e-eeccccceEEeeecCCCCceEEEEeecCCc-ceEEEEecCc
Q 019059 26 TDHTSFLTGTLSLKE-ENEVHLLRLSSGGTELICE--G-LFSHPNEIWDLSSCPFDQRIFSTVFSTGES-YGAAIWQIPE 100 (346)
Q Consensus 26 ~~~~~~~~g~~~~~~-~~~i~~~~~~~~~~~~~~~--~-~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d-~~i~vw~~~~ 100 (346)
+++.+++......+. ...++..+.......+... . ..+|...+..++||||++.|+.+...+|.+ ..|++||+.
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~- 159 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD- 159 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT-
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC-
Confidence 567777665443222 1234444332222221111 1 123445688999999999998876443333 489999998
Q ss_pred ccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCe----------------EEEEEcCCCCCCceeeeccc
Q 019059 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN----------------IFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~----------------i~vwd~~~~~~~~~~~~~~~ 164 (346)
.++.+..... ...+..++|+|||+.+++++ .++. |++|++.++.....+... .
T Consensus 160 --------tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~-~ 228 (710)
T 2xdw_A 160 --------GAKELPDVLE-RVKFSCMAWTHDGKGMFYNA-YPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE-F 228 (710)
T ss_dssp --------TTEEEEEEEE-EECSCCEEECTTSSEEEEEE-CCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC-C
T ss_pred --------CCCCCccccc-CcccceEEEEeCCCEEEEEE-ECCccccccccccccCCCCEEEEEECCCCcccceEEec-c
Confidence 4444432212 22367899999999744444 3433 999999876532222221 1
Q ss_pred CCCceeeEEEEeCCCCCcEEEEec-----CCeEEEEEccC------CC-ccceeeccc--eeEEEeCCCCCcEEEEecCC
Q 019059 165 SGMLHYLSGGAWDPHDVNAVAATC-----ESSVQFWDLRS------MG-KTNSIEHAH--VRNVDYDTKKKHLLVTAADE 230 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~------~~-~~~~~~~~~--v~~~~~~~~~~~~l~~~~~d 230 (346)
..+...+..+.|+|++++|+..+. +..|++||+.+ +. ....+.... +.. .|+|++..+++.+..+
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~ 307 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRH 307 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTT
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCC
Confidence 223335778999999999888764 56899999987 43 344444222 433 5788888555554433
Q ss_pred ---CeEEEEEcccCCc-ceeeecCCCc--ceEEEEeCCCCCcEEEEecCCCe--EEEEecCCCCCCCCCcccccCCcccc
Q 019059 231 ---SGIHLWDLRMLKA-PIQELPGHTH--WTWAVCCNPEYDGFILSAGTDST--VNLWLVSTSNHDELPSESLVESPNQR 302 (346)
Q Consensus 231 ---g~i~i~d~~~~~~-~~~~~~~~~~--~v~~v~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~ 302 (346)
+.|.+||+..... ....+..|.. .+..+.|++++ .++++...|+. |.+||+..
T Consensus 308 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~------------------ 368 (710)
T 2xdw_A 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLAT------------------ 368 (710)
T ss_dssp CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTT------------------
T ss_pred CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCC------------------
Confidence 3799999876431 2345555544 67889999777 88889888885 55667655
Q ss_pred ccccccccccccceeeEEEeCCCCCcEEEEee---cCCeEEEeeec
Q 019059 303 ANSLLNSYSDYEDSVYGLAWSSREPWIFASLS---YDGRVRNHMLE 345 (346)
Q Consensus 303 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~d~~v~vw~~~ 345 (346)
++.+..+..+...+..++++|+++.++++.+ ..+.|++||+.
T Consensus 369 -g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 369 -GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp -CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred -CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 5555666666777899999999875555544 34679999874
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.8e-18 Score=148.01 Aligned_cols=277 Identities=8% Similarity=0.021 Sum_probs=167.4
Q ss_pred eeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccc-eEEeeecCCCCceEEEEeecCCcceEEEEe
Q 019059 19 ISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNE-IWDLSSCPFDQRIFSTVFSTGESYGAAIWQ 97 (346)
Q Consensus 19 ~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~ 97 (346)
+....+++++.++++.... .....++++++... .. ..+..+... ...+.|+|+++.|+.+. .++.|.+|+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~-~g~~~l~~~d~~~~--~~--~~l~~~~~~~~~~~~~spdg~~l~~~~----~~~~l~~~d 108 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDF-DGNRNYYLLNLETQ--QA--VQLTEGKGDNTFGGFISTDERAFFYVK----NELNLMKVD 108 (396)
T ss_dssp TTSCCBCTTSCEEEEEECT-TSSCEEEEEETTTT--EE--EECCCSSCBCTTTCEECTTSSEEEEEE----TTTEEEEEE
T ss_pred eecCcCCCCCCEEEEEEec-CCCceEEEEECCCC--cE--EEeecCCCCccccceECCCCCEEEEEE----cCCcEEEEE
Confidence 3445678899888776432 22346777765543 22 233333333 33478999999998863 566899999
Q ss_pred cCcccCCCCCccceeeeeeeccCCceEE-------------------EEeecCCCCcEEEE----ecCCeEEEEEcCCCC
Q 019059 98 IPELYGQLNSPQLERIAALDAHVGKINC-------------------VLWWSSGRHDKLVS----IDEENIFLWSLDCSN 154 (346)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~~~~~----~~d~~i~vwd~~~~~ 154 (346)
+. ..+.......+...... +.|+|+++.+++.. ..+..|.+||+.+++
T Consensus 109 ~~---------~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 109 LE---------TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp TT---------TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred CC---------CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 87 33333333323332222 35678887544332 346789999998755
Q ss_pred CCceeeecccCCCceeeEEEEeCC-CCCcEEEEecC------CeEEEEEccCCCccceeec--cc-eeEEEeCCCCCcEE
Q 019059 155 KNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCE------SSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTKKKHLL 224 (346)
Q Consensus 155 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~--~~-v~~~~~~~~~~~~l 224 (346)
.. .+.. +...+..+.|+| ++..++..+.+ ..|.+||+..++....... .. +..++|+|+++.++
T Consensus 180 ~~-~~~~-----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 180 LE-VIHQ-----DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMA 253 (396)
T ss_dssp EE-EEEE-----ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEE
T ss_pred EE-eecc-----CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEE
Confidence 32 2221 223678899999 78777766543 4688999876653322221 22 88899999998444
Q ss_pred EEecCC----CeEEEEEcccCCcceeeecCCCcceEEEEeCC-CCCcEEEEec----------------CCCeEEEEecC
Q 019059 225 VTAADE----SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNP-EYDGFILSAG----------------TDSTVNLWLVS 283 (346)
Q Consensus 225 ~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~-~~~~~l~s~~----------------~d~~i~iwd~~ 283 (346)
+++..+ +.|++||+.... . ..+.... ... +.|+| +| .++++++ .+..|++||+.
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~-~-~~l~~~~-~~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 254 YVSYFKGQTDRVIYKANPETLE-N-EEVMVMP-PCS-HLMSNFDG-SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEETTTCCEEEEEECTTTCC-E-EEEEECC-SEE-EEEECSSS-SEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEecCCCCccceEEEEECCCCC-e-EEeeeCC-CCC-CCccCCCC-ceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 443222 449999997632 2 2222112 223 88999 99 7777654 34789999998
Q ss_pred CCCCCCCCcccccCCccccccccccccccccc-----------eeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 284 TSNHDELPSESLVESPNQRANSLLNSYSDYED-----------SVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
. ++. ..+..+.. .+..++|+|+++.++++...++...+|.+
T Consensus 329 ~-------------------~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 329 A-------------------KSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp T-------------------TBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred c-------------------Cce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 6 332 23333332 25678999999855555555666666654
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.80 E-value=1.2e-17 Score=153.84 Aligned_cols=281 Identities=11% Similarity=0.021 Sum_probs=170.5
Q ss_pred EeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceE---------Eeeec--CCCCc-eEEEEe
Q 019059 18 CISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIW---------DLSSC--PFDQR-IFSTVF 85 (346)
Q Consensus 18 ~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~~~~~ 85 (346)
.+....++++..-++. .....++...+|.....+. ...+..|...+. ...|+ ||++. |+.+
T Consensus 25 ~~~~~~~s~~~~~~~~--~~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~-- 97 (662)
T 3azo_A 25 RPACVGAVGDEVWWVA--PRPAEAGRATLVRRRADGA---EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT-- 97 (662)
T ss_dssp CCEEEEEETTEEEEEE--EETTTTTEEEEEEECTTSC---EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE--
T ss_pred ccceeEEcCCeEEEEe--cCcccCCcEEEEEECCCCC---cceeCCCCccccccccccCCccceeeeecCCCeEEEEE--
Confidence 3444445544333332 2223456777777644332 345556666665 56565 99998 7765
Q ss_pred ecCCcceEEEEecCcccCCCCCccc-eeeeeeec-----cCCceEEEEeecCCCCcEEEEecC----------CeEEEEE
Q 019059 86 STGESYGAAIWQIPELYGQLNSPQL-ERIAALDA-----HVGKINCVLWWSSGRHDKLVSIDE----------ENIFLWS 149 (346)
Q Consensus 86 ~~~~d~~i~vw~~~~~~~~~~~~~~-~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~d----------~~i~vwd 149 (346)
...+..|.++++.. .+ .....+.. |...+..++|+|||+.++ .++.+ ..|++||
T Consensus 98 -~~~~~~l~~~~~~~--------~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~-~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 98 -HFGDQRLYAFEPDA--------PGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVW-CMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp -BTTTCCEEEECTTS--------TTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEE-EEEEEECSSSTTCEEEEEEEEE
T ss_pred -ECCCCeEEEEcCCC--------CCCCCCEeccCCccCCCCccccCcEECCCCCEEE-EEEecccCCCCCCceeEEEEEE
Confidence 23344555555420 01 22333434 567889999999999644 44434 5899999
Q ss_pred cCCC-----CCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC--------CeEEEEEcc-CCC--ccceeecc--c-
Q 019059 150 LDCS-----NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--------SSVQFWDLR-SMG--KTNSIEHA--H- 210 (346)
Q Consensus 150 ~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~-~~~--~~~~~~~~--~- 210 (346)
+.+. .....+. . .+...+..++|+|||+.|+.++.+ ..|++||+. +++ ....+... .
T Consensus 168 ~~~~~~~~~~~~~~l~-~---~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 168 LDGSAAADRSAVRELS-D---DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp TTSTTTTCGGGSEESS-C---SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred CCCCccccCCceeEEE-e---cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 9862 1122221 0 123467889999999999888754 379999999 562 33333323 2
Q ss_pred eeEEEeCCCCCcEEEEecCCC--eEEEEEcccCCcceeeecCCCcc---------eEEEEeCCCCCcEEEEecCCCeEEE
Q 019059 211 VRNVDYDTKKKHLLVTAADES--GIHLWDLRMLKAPIQELPGHTHW---------TWAVCCNPEYDGFILSAGTDSTVNL 279 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~---------v~~v~~~~~~~~~l~s~~~d~~i~i 279 (346)
+..++|+|+|+ +++++..++ .|.+||+.. +. ...+..+... +..++|+|++ .++++++. +.++|
T Consensus 244 ~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~~-~~~~l 318 (662)
T 3azo_A 244 IAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GA-ATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHGK-GAAVL 318 (662)
T ss_dssp EEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CC-EEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEBS-SSCEE
T ss_pred EcceEECCCCe-EEEEECCCCCeEEEEEECCC-Cc-eeecccccccccCccccccCceEeEeCCC-EEEEEEEc-CccEE
Confidence 99999999999 888888888 566666543 32 3333322221 4678889999 89999998 99999
Q ss_pred EecCCCCCCCCCcccccCCccccccccccccccccceeeEE-EeCCCCCcEEEEeecCCeEEEee
Q 019059 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL-AWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
|.+.. ....+..+..|...+..+ +++++. .++++.+.+....+|.
T Consensus 319 ~~~d~------------------~~~~~~~l~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 319 GILDP------------------ESGELVDAAGPWTEWAATLTVSGTR-AVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEET------------------TTTEEEECCSSCCEEEEEEEEETTE-EEEEEEETTEEEEEEE
T ss_pred EEEEC------------------CCCcEEEecCCCCeEEEEEecCCCE-EEEEEcCCCCCCEEEE
Confidence 94442 023356666777777777 554432 2444455555555554
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=5.6e-18 Score=145.85 Aligned_cols=247 Identities=8% Similarity=-0.051 Sum_probs=155.6
Q ss_pred eeeeccccceEE-----eeecCCCCceEEEEeecCCcc--eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC
Q 019059 59 EGLFSHPNEIWD-----LSSCPFDQRIFSTVFSTGESY--GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS 131 (346)
Q Consensus 59 ~~~~~h~~~v~~-----~~~~~~~~~l~~~~~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (346)
..+..|...... .+|+|+++.|+.+. ..++ .|.+||+. .++.......+...+..+.|+|+
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~---~~~g~~~l~~~d~~---------~g~~~~lt~~~~~~~~~~~~spd 91 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGG---AFDGPWNYYLLDLN---------TQVATQLTEGRGDNTFGGFLSPD 91 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEE---CTTSSCEEEEEETT---------TCEEEECCCSSCBCSSSCEECTT
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEE---cCCCCceEEEEeCC---------CCceEEeeeCCCCCccceEEcCC
Confidence 445556655555 89999999998874 3355 47777876 45555555555555667889999
Q ss_pred CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEE--EEeCCCCCcEEEEe----------------------
Q 019059 132 GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSG--GAWDPHDVNAVAAT---------------------- 187 (346)
Q Consensus 132 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~---------------------- 187 (346)
++. ++.++.++.|++||+.+++....... +...+.. ..++|++..++...
T Consensus 92 g~~-l~~~~~~~~l~~~d~~~g~~~~~~~~-----~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 92 DDA-LFYVKDGRNLMRVDLATLEENVVYQV-----PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp SSE-EEEEETTTEEEEEETTTCCEEEEEEC-----CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred CCE-EEEEeCCCeEEEEECCCCcceeeeec-----hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 996 55555678999999997653322211 1112322 34589888876432
Q ss_pred cCCeEEEEEccCCCccceeeccc-eeEEEeCC-CCCcEEEEecC------CCeEEEEEcccCCcceeeecCCC--cceEE
Q 019059 188 CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDT-KKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHT--HWTWA 257 (346)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~--~~v~~ 257 (346)
.+..|++||+.+++......... +..++|+| ++. .++.... ...|.++|+.. . ....+..+. ..+..
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDG-T-NMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTS-C-CCEESCCCCTTEEEEE
T ss_pred CcceEEEEECCCCceEEeecCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCC-C-ceEEeeeCCCCccccc
Confidence 34689999999887554443333 89999999 997 5554443 23677777764 2 344454444 35788
Q ss_pred EEeCCCCCcEEEEec-CCC----eEEEEecCCCCCCCCCcccccCCccccccc--cccccccccce---eeEEEeCCCCC
Q 019059 258 VCCNPEYDGFILSAG-TDS----TVNLWLVSTSNHDELPSESLVESPNQRANS--LLNSYSDYEDS---VYGLAWSSREP 327 (346)
Q Consensus 258 v~~~~~~~~~l~s~~-~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---v~~~~~~~~~~ 327 (346)
+.|+|+| +.|+..+ .++ .|++||+.+ ++ .+..+.++... ...+.|+|+|+
T Consensus 243 ~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~-------------------g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 243 EFWVPDG-SALVYVSYLKGSPDRFIYSADPET-------------------LENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp EEECTTS-SCEEEEEEETTCCCEEEEEECTTT-------------------CCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred ceECCCC-CEEEEEecCCCCCcceEEEEecCC-------------------CceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 9999999 6554433 222 399999987 33 22223331111 22347999998
Q ss_pred cEEEEe--------ecCCeEEEeeecC
Q 019059 328 WIFASL--------SYDGRVRNHMLEK 346 (346)
Q Consensus 328 ~~l~s~--------~~d~~v~vw~~~~ 346 (346)
.++++. ..+..|++|++++
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp CC------------CCCCEEEEEETTT
T ss_pred cceeEeeeccccccCCCCEEEEEeccC
Confidence 554433 4567899999763
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=1.8e-16 Score=131.24 Aligned_cols=233 Identities=8% Similarity=-0.092 Sum_probs=157.7
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
.+.....+++|+|+++.++.+ +..++.|..|+.. .. ...+..+...+.+++++++|+ ++++...+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~---~~~~~~i~~~~~~---------~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~ 89 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFS---DVRQNRTWAWSDD---------GQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHGL 89 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEE---EGGGTEEEEEETT---------SC--EEEEESSCSSEEEEEECTTCC-EEEEETTT
T ss_pred cCCccccCCeEeCCCCEEEEE---eCCCCEEEEEECC---------CC--eEEEECCCCCcceeeECCCCc-EEEEecCC
Confidence 455667899999999855554 3567899999987 32 455656777899999999998 34444456
Q ss_pred CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-----------------cCCeEEEEEccCCCccce
Q 019059 143 ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-----------------CESSVQFWDLRSMGKTNS 205 (346)
Q Consensus 143 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~ 205 (346)
+.|.+||..+++.. .+...........+..++++|+|+.+++.. ..+.|..+|.. ++ ...
T Consensus 90 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~ 166 (296)
T 3e5z_A 90 RRLERQREPGGEWE-SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSA 166 (296)
T ss_dssp TEEEEECSTTCCEE-EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEE
T ss_pred CeEEEEcCCCCcEE-EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEE
Confidence 89999998765422 221111111122567899999998777632 13456666655 33 233
Q ss_pred eeccc--eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcc---eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 206 IEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (346)
Q Consensus 206 ~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iw 280 (346)
+.... +..++|+|+++ .+++...++.|.+||+...+.. ...+..+...+..++++++| +++++. ++.|.+|
T Consensus 167 ~~~~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVL 242 (296)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEE
T ss_pred eecCCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEE
Confidence 32222 89999999998 5577888899999998732322 22333345567889999999 766655 7889999
Q ss_pred ecCCCCCCCCCcccccCCccccccccccccccccceeeEEEe-CCCCCcEEEEeecCCeE
Q 019059 281 LVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAW-SSREPWIFASLSYDGRV 339 (346)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~d~~v 339 (346)
|... +.+..+..+.. +.+++| .|+++ .|..++.++..
T Consensus 243 ~~~g--------------------~~~~~~~~~~~-~~~~~f~~~d~~-~L~v~t~~~l~ 280 (296)
T 3e5z_A 243 TPDG--------------------DELGRVLTPQT-TSNLCFGGPEGR-TLYMTVSTEFW 280 (296)
T ss_dssp CTTS--------------------CEEEEEECSSC-CCEEEEESTTSC-EEEEEETTEEE
T ss_pred CCCC--------------------CEEEEEECCCC-ceeEEEECCCCC-EEEEEcCCeEE
Confidence 9863 56666666666 899999 58887 56666666533
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=1.2e-16 Score=148.92 Aligned_cols=240 Identities=13% Similarity=0.121 Sum_probs=151.3
Q ss_pred eccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccc-----eEEeeecCCCCceEEEEeec-----CCc
Q 019059 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNE-----IWDLSSCPFDQRIFSTVFST-----GES 90 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~~~~~~~-----~~d 90 (346)
.+.+.+++..++.+ ++.|.+|++...+.. ..+.+|... ..+++||||++.|+.+.... +..
T Consensus 21 ~~~w~~dg~~~~~~------~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ------ENNILVFNAEYGNSS---VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CEEECSSSEEEEEE------TTEEEEEETTTCCEE---EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccEECCCCcEEEEc------CCcEEEEECCCCceE---EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 34455576544443 678999998775432 234445432 24478899999988864110 112
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC-----
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS----- 165 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----- 165 (346)
+.+.+||+. .++. ..+..|...+..++|||||+.++++ .++.|++|++.++... .+......
T Consensus 92 ~~~~~~d~~---------~~~~-~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~-~lt~~g~~~~~~~ 158 (740)
T 4a5s_A 92 ASYDIYDLN---------KRQL-ITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSY-RITWTGKEDIIYN 158 (740)
T ss_dssp EEEEEEETT---------TTEE-CCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCE-ECCSCCBTTTEEE
T ss_pred eEEEEEECC---------CCcE-EEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceE-EEcCCCCccceec
Confidence 567899998 4443 3466777889999999999963333 5799999999876532 22111100
Q ss_pred CCc---------eeeEEEEeCCCCCcEEEEecC-C-----------------------------------eEEEEEccC-
Q 019059 166 GML---------HYLSGGAWDPHDVNAVAATCE-S-----------------------------------SVQFWDLRS- 199 (346)
Q Consensus 166 ~~~---------~~v~~~~~~~~~~~l~~~~~d-~-----------------------------------~i~i~d~~~- 199 (346)
++. .....+.|+|||+.|+.+..| + .|++||+.+
T Consensus 159 g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~ 238 (740)
T 4a5s_A 159 GITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL 238 (740)
T ss_dssp SBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSC
T ss_pred CcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCC
Confidence 111 122358999999999887532 1 588899998
Q ss_pred --CC--ccceeec-----cc---eeEEEeCCCCCcEEEEec----CCCeEEEEEcccCC-----cceeee--cCCCcceE
Q 019059 200 --MG--KTNSIEH-----AH---VRNVDYDTKKKHLLVTAA----DESGIHLWDLRMLK-----APIQEL--PGHTHWTW 256 (346)
Q Consensus 200 --~~--~~~~~~~-----~~---v~~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~-----~~~~~~--~~~~~~v~ 256 (346)
++ ....+.. ++ +..++|+|+++ +++... .+..|.+||+.+.. ..+..+ ..|...+.
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 239 SSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp CSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS
T ss_pred CCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEc
Confidence 73 2223321 13 89999999998 555432 23479999998733 012222 44665554
Q ss_pred -----EEEeCCCCCcEEE-Eec-CCC--eEEEEecCC
Q 019059 257 -----AVCCNPEYDGFIL-SAG-TDS--TVNLWLVST 284 (346)
Q Consensus 257 -----~v~~~~~~~~~l~-s~~-~d~--~i~iwd~~~ 284 (346)
.+.|+||| +.|+ ..+ .+| .|++||...
T Consensus 318 ~~~~~~p~fspDG-~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 318 RFRPSEPHFTLDG-NSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp SSSCCCCEECTTS-SEEEEEEECTTSCEEEEEEETTC
T ss_pred cCcCCCceEcCCC-CEEEEEEEcCCCceEEEEEECCC
Confidence 78899999 6655 554 344 688888876
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=2e-15 Score=127.18 Aligned_cols=238 Identities=11% Similarity=0.001 Sum_probs=155.3
Q ss_pred eeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 59 EGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
..+..+...+.+++|+|+++.+++ +..++.|.+||.+ ..+.......+...+.+++++++++ ++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~----~~~~~~i~~~d~~---------~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~ 103 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLL----DVFEGNIFKINPE---------TKEIKRPFVSHKANPAAIKIHKDGR-LFVC 103 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEE----ETTTCEEEEECTT---------TCCEEEEEECSSSSEEEEEECTTSC-EEEE
T ss_pred EEEeccCccccCcEECCCCCEEEE----ECCCCEEEEEeCC---------CCcEEEEeeCCCCCcceEEECCCCc-EEEE
Confidence 344456667899999998874444 3567899999986 3333333334567899999999997 4555
Q ss_pred EecC----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec------CCeEEEEEccCCCccceeec
Q 019059 139 SIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC------ESSVQFWDLRSMGKTNSIEH 208 (346)
Q Consensus 139 ~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~ 208 (346)
+..+ +.|.+||.+++... ...... .....+..++++|++..+++... .+.|..+|..+++.......
T Consensus 104 ~~~~~~~~~~i~~~d~~~~~~~-~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 104 YLGDFKSTGGIFAATENGDNLQ-DIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp ECTTSSSCCEEEEECTTSCSCE-EEECSS--SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred eCCCCCCCceEEEEeCCCCEEE-EEEccC--ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 4444 68999998765432 121111 12346889999999876665543 35676777665443322221
Q ss_pred cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceee--------ecCCCcceEEEEeCCCCCcEEEEecCCCeEEE
Q 019059 209 AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE--------LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (346)
Q Consensus 209 ~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--------~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~i 279 (346)
.. +..++|+|++..++++...++.|.+||++.....+.. +.++ ..+..++++++| .++++...++.|.+
T Consensus 181 ~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 181 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLV 258 (333)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEE
T ss_pred CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEE
Confidence 12 8899999999745566667789999998642222221 1222 467889999999 77777777889999
Q ss_pred EecCCCCCCCCCcccccCCcccccccccccccccc------ceeeEEEeCCCCCcEEEEeec
Q 019059 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE------DSVYGLAWSSREPWIFASLSY 335 (346)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~l~s~~~ 335 (346)
||... +.+..+..+. ..+.+++|+|+++.++++...
T Consensus 259 ~d~~g--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 259 FNKRG--------------------YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ECTTS--------------------CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ECCCC--------------------CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99853 3333333222 258999999998645444443
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=1.5e-16 Score=135.44 Aligned_cols=274 Identities=8% Similarity=-0.006 Sum_probs=173.0
Q ss_pred CcceEEEeeccc--CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEe------ecCCcceEEEEec
Q 019059 27 DHTSFLTGTLSL--KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVF------STGESYGAAIWQI 98 (346)
Q Consensus 27 ~~~~~~~g~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------~~~~d~~i~vw~~ 98 (346)
+..++.+..... ..++.+++|+.... .+. ..+..+..+ .++|+|++++++++.. .|..++.|.+||.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~--~~~-~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNG--KFL-GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTC--CEE-EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCC--eEE-EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 445555543221 23678999975443 222 334444444 8999999999988742 1224678999998
Q ss_pred CcccCCCCCccceeeeeeecc------CCceEEEEeecCCCCcEEEEec-CCeEEEEEcCCCCCCceeeecccCCCceee
Q 019059 99 PELYGQLNSPQLERIAALDAH------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYL 171 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 171 (346)
. +.+.+.++... ......++++|+|++++++... ++.|.+||+.+.+....+.. .. ..
T Consensus 89 ~---------t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~----~~ 153 (361)
T 2oiz_A 89 D---------KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AA----GC 153 (361)
T ss_dssp T---------TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GT----TE
T ss_pred c---------CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CC----Cc
Confidence 7 56666666432 2356789999999974444443 68999999987643222011 11 22
Q ss_pred EEEEeCCCC-CcEEEEecCCeEEEEEccC-CCccc------eeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC
Q 019059 172 SGGAWDPHD-VNAVAATCESSVQFWDLRS-MGKTN------SIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (346)
Q Consensus 172 ~~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~------~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (346)
..+.+.|++ ..+++.+.||.+.+|++.. ++... .+..+. ...+.+++++. .++..+.++.|.++|+....
T Consensus 154 ~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~ 232 (361)
T 2oiz_A 154 WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD-KAHFVSYYGNVYSADFSGDE 232 (361)
T ss_dssp EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS-EEEEEBTTSEEEEEECSSSS
T ss_pred ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCC-EEEEEeCCCeEEEEEecCCC
Confidence 335567766 4567777899999999875 44331 111111 23344456676 45555678899999986422
Q ss_pred cc-eeeecCC----------CcceEEEEeCCCCCcEEEEecC-----------CCeEEEEecCCCCCCCCCcccccCCcc
Q 019059 243 AP-IQELPGH----------THWTWAVCCNPEYDGFILSAGT-----------DSTVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 243 ~~-~~~~~~~----------~~~v~~v~~~~~~~~~l~s~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
.. ...+... ......++|+|++ ..++++.. .+.|.+||+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg-~~lyv~~~~~~~~~~~~~~~~~v~viD~~t---------------- 295 (361)
T 2oiz_A 233 VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS-GRMYVFMHPDGKEGTHKFPAAEIWVMDTKT---------------- 295 (361)
T ss_dssp CEEEEEEESCCHHHHHTTCEECCSSCEEEETTT-TEEEEEEESSCCTTCTTCCCSEEEEEETTT----------------
T ss_pred ceecccccccCccccccccccCCeeEEEEecCC-CeEEEEEccCCCcccccCCCceEEEEECCC----------------
Confidence 11 1111100 0112237899998 55554432 34899999998
Q ss_pred ccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+.+..+..+. +.+++|+|+|+ +|++++. +.|.+||++
T Consensus 296 ---~~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 296 ---KQRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp ---TEEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEEEEECS
T ss_pred ---CcEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEEEEECC
Confidence 78888888776 89999999998 6666665 999999975
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=3.8e-16 Score=144.51 Aligned_cols=284 Identities=8% Similarity=-0.027 Sum_probs=176.4
Q ss_pred CCcceEEEeecccCC-CCeEEEEEecCCCCeEEEe---eeeccccceEEeeecCCCCceEEEEee-cCCcceEEEEecCc
Q 019059 26 TDHTSFLTGTLSLKE-ENEVHLLRLSSGGTELICE---GLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYGAAIWQIPE 100 (346)
Q Consensus 26 ~~~~~~~~g~~~~~~-~~~i~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~l~~~~~~-~~~d~~i~vw~~~~ 100 (346)
+++.+++......+. ...++..+........... ...+|...+..++|||||+.|+.+... |+.+..|++||+.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~- 155 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD- 155 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT-
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC-
Confidence 466777765543332 2334444433322222211 012455679999999999999877643 3346789999998
Q ss_pred ccCCCCCccceee-e-eeeccCCceEEEEeecCCCCcEEEEecCCe-------------EEEEEcCCCCCCceeeecccC
Q 019059 101 LYGQLNSPQLERI-A-ALDAHVGKINCVLWWSSGRHDKLVSIDEEN-------------IFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 101 ~~~~~~~~~~~~~-~-~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~-------------i~vwd~~~~~~~~~~~~~~~~ 165 (346)
.++.+ . .+.. .....++|+|||+. ++.++.+.. |++|++.++.....+.. ...
T Consensus 156 --------tg~~~~~~~~~~--~~~~~~~wspDg~~-l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~-~~~ 223 (695)
T 2bkl_A 156 --------SGEWSKVDVIEG--GKYATPKWTPDSKG-FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH-ERT 223 (695)
T ss_dssp --------TCCBCSSCCBSC--CTTCCCEECTTSSE-EEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE-CCC
T ss_pred --------CCCCcCCcccCc--ccccceEEecCCCE-EEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE-ecC
Confidence 33332 1 1111 11267899999996 444444444 99999987653222222 222
Q ss_pred CCceeeEEEEeCCCCCcEEEEecCC----eEEEEEccCCCccceeeccc--eeEEEeCCCCCcEEEEec---CCCeEEEE
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATCES----SVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAA---DESGIHLW 236 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~---~dg~i~i~ 236 (346)
.+...+..+.|+|+|+.|+.++.++ .|+++|..+++. ..+.... +....+ +++. +++.+. .++.|.+|
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEE
Confidence 3344678999999999998887655 677776655543 3333222 555556 6776 666655 35789999
Q ss_pred EcccCCc-ceeeecCC--CcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccc
Q 019059 237 DLRMLKA-PIQELPGH--THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY 313 (346)
Q Consensus 237 d~~~~~~-~~~~~~~~--~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (346)
|+..... ....+..+ ...+..++|+ ++ .++++...|+..+||.+.. .+.....+..+
T Consensus 301 d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~------------------~g~~~~~l~~~ 360 (695)
T 2bkl_A 301 DPAKPARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATL------------------KGKPVRTVQLP 360 (695)
T ss_dssp BTTBCSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEET------------------TCCEEEECCCS
T ss_pred eCCCCCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeC------------------CCCeeEEecCC
Confidence 9876331 12334333 4567888888 55 8889999999988887653 13334444444
Q ss_pred -cceeeEEEeCCCCCcEEEEee---cCCeEEEeeec
Q 019059 314 -EDSVYGLAWSSREPWIFASLS---YDGRVRNHMLE 345 (346)
Q Consensus 314 -~~~v~~~~~~~~~~~~l~s~~---~d~~v~vw~~~ 345 (346)
...+..++++|+++.++++.+ ..++|++||++
T Consensus 361 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 361 GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 566888999999874544443 34679999874
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=3.6e-16 Score=132.45 Aligned_cols=258 Identities=10% Similarity=0.080 Sum_probs=157.3
Q ss_pred CcceEEEeeccc-----CCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecC-CcceEEEEecCc
Q 019059 27 DHTSFLTGTLSL-----KEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG-ESYGAAIWQIPE 100 (346)
Q Consensus 27 ~~~~~~~g~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~-~d~~i~vw~~~~ 100 (346)
++.+++...... .....++++++..... ..+ ..+..++|+|+|+.|+.+...++ ....|.+|++.
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~- 93 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNAR----RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE- 93 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE----EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT-
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCce----EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC-
Confidence 566666543221 1235677776665321 222 56888999999999988742221 22347777776
Q ss_pred ccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEec--------------------------CCeEEEEEcCCCC
Q 019059 101 LYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSID--------------------------EENIFLWSLDCSN 154 (346)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------d~~i~vwd~~~~~ 154 (346)
.++..... .+.. +..+.|+|+|+.+++++.. ...|.+||+.+++
T Consensus 94 --------~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 94 --------TLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp --------TTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred --------CCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 33433333 3333 9999999999975555432 2578899987654
Q ss_pred CCceeeecccCCCceeeEEEEeCCCCCcEEEEecC------C-eEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEE
Q 019059 155 KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE------S-SVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVT 226 (346)
Q Consensus 155 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~-~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~ 226 (346)
....+.. . .+..+.|+|++ .++++..+ . ...+|.+.+++. ..+.... +..+ +|+|+.+++.
T Consensus 164 ~~~~l~~------~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~~~~~~~--spdg~~l~~~ 232 (347)
T 2gop_A 164 VIEEFEK------P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEKVSFYAV--DSDGERILLY 232 (347)
T ss_dssp EEEEEEE------E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEEESEEEE--EECSSCEEEE
T ss_pred EEeeecC------C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccCcceeeE--CCCCCEEEEE
Confidence 2122221 1 56788999999 66666543 2 334444444433 3332112 4444 8999844444
Q ss_pred ecC-------CCeEEEEEcccCCcceeeecCCCcceEE-EEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCC
Q 019059 227 AAD-------ESGIHLWDLRMLKAPIQELPGHTHWTWA-VCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVES 298 (346)
Q Consensus 227 ~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~v~~-v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 298 (346)
+.. ...|.+|| . +........+...+.. +.|+ ++ ++++++.++.++|| +..
T Consensus 233 ~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~-------------- 291 (347)
T 2gop_A 233 GKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWD-------------- 291 (347)
T ss_dssp ECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EES--------------
T ss_pred EccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcC--------------
Confidence 333 24688888 3 4344444456677886 8999 65 78888999999999 875
Q ss_pred ccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeE-EEeee
Q 019059 299 PNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV-RNHML 344 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v-~vw~~ 344 (346)
++... +..+...|.+++|+| . ++++++.++.. ++|.+
T Consensus 292 -----g~~~~-~~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 292 -----GEIKP-IAKGRHWIMGFDVDE--I-VVYLKETATRLRELFTW 329 (347)
T ss_dssp -----SSEEE-EECSSSEEEEEEESS--S-EEEEEECSSSCCEEEEE
T ss_pred -----CceEE-EecCCCeEEeeeeeC--c-EEEEEcCCCChHHheEe
Confidence 34322 233466799999999 4 67777766664 77765
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=1.4e-15 Score=124.15 Aligned_cols=237 Identities=11% Similarity=-0.002 Sum_probs=160.7
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIF 146 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~ 146 (346)
...+++++|++..++++ ...++.|.+|+.. ..........+...+.++++++++. ++++.. ++.|.
T Consensus 25 ~p~~i~~~~~g~l~v~~---~~~~~~i~~~~~~---------~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~ 90 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTS---EGMYGRVVKLATG---------STGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVV 90 (270)
T ss_dssp CEEEEEECTTCCEEEEE---CSSSCEEEEECC--------------EECCCCSCCSCCCEEECTTCC-EEEEET-TTEEE
T ss_pred CccceEECCCCCEEEEc---cCCCCcEEEecCC---------CcccceEeeCCcCCcceeEECCCCC-EEEEcC-CCEEE
Confidence 67889999988744413 3567889999865 2221111122335678899999988 454445 88999
Q ss_pred EEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEE
Q 019059 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLL 224 (346)
Q Consensus 147 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l 224 (346)
+||...... ..... .....+.++++++++..+++...++.|.+||..+.......... . +.++++++++. ++
T Consensus 91 ~~d~~~~~~-~~~~~----~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 91 TLAAGSNNQ-TVLPF----DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp EECTTCSCC-EECCC----CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred EEeCCCceE-eeeec----CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence 999875432 11111 11236789999999886666566889999976654433222212 2 88999999997 78
Q ss_pred EEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
++...++.|.+||..... .......+...+..++++++| .++++...++.|.+||... .
T Consensus 165 v~~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~-------------------~ 223 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNN-QVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGS-------------------T 223 (270)
T ss_dssp EEEGGGTEEEEECTTTCC-EEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTC-------------------S
T ss_pred EEECCCCEEEEEecCCCc-eEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCC-------------------C
Confidence 777778899999987522 222222333678899999999 8888887888999999875 2
Q ss_pred ccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 305 SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 305 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
........+...+.+++++|+|. ++++...+++|+++++.
T Consensus 224 ~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 224 TSTVLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CCEECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCC
T ss_pred cceeeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCC
Confidence 22211222334589999999996 88899999999999874
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=2.1e-15 Score=126.62 Aligned_cols=239 Identities=9% Similarity=0.009 Sum_probs=164.3
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
....++.+. +..+.++. ..++.|.+||.. +.+.+.++. .......++++++++ ++++...++.|
T Consensus 44 ~~~~~i~~~--~~~lyv~~---~~~~~v~viD~~---------t~~~~~~i~-~~~~p~~i~~~~~g~-lyv~~~~~~~v 107 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVV---NNSHVIFAIDIN---------TFKEVGRIT-GFTSPRYIHFLSDEK-AYVTQIWDYRI 107 (328)
T ss_dssp SCEEEEEEE--TTEEEEEE---GGGTEEEEEETT---------TCCEEEEEE-CCSSEEEEEEEETTE-EEEEEBSCSEE
T ss_pred ccceEEEEE--CCEEEEEE---cCCCEEEEEECc---------ccEEEEEcC-CCCCCcEEEEeCCCe-EEEEECCCCeE
Confidence 346677774 44555543 457899999998 677777774 345678999999984 44444478999
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe--cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCc
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT--CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKH 222 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~ 222 (346)
.+||..+.+....+......+.......+++ ++..++++. .++.|.++|+.+++....+..+. ...++++|+++
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK- 184 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-
T ss_pred EEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-
Confidence 9999987653333322221111224456666 455566665 38899999999998877776555 88999999997
Q ss_pred EEEEecCC----------CeEEEEEcccCCcceeeecCC-CcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCC
Q 019059 223 LLVTAADE----------SGIHLWDLRMLKAPIQELPGH-THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELP 291 (346)
Q Consensus 223 ~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~-~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 291 (346)
+++++..+ +.|.++|..+ .+....+... ......++|+|++ ..|+++.. .|.+||..+
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~~~d~~t------- 253 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIWRMPVEA------- 253 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEEEEETTC-------
T ss_pred EEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEEEEECCC-------
Confidence 67666554 7899999886 4444454422 2468899999999 77776654 899999987
Q ss_pred cccccCCcccccccccc--ccccccceeeEEEeCCCCCcEEEEe----ecCCeEEEeeecC
Q 019059 292 SESLVESPNQRANSLLN--SYSDYEDSVYGLAWSSREPWIFASL----SYDGRVRNHMLEK 346 (346)
Q Consensus 292 ~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~----~~d~~v~vw~~~~ 346 (346)
++... .+.........++++|++..++++. ..++.|.+|+.++
T Consensus 254 ------------~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 254 ------------DRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp ------------SSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred ------------CceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 33321 1111234578999999655588887 6789999998753
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.74 E-value=2.3e-15 Score=128.09 Aligned_cols=268 Identities=12% Similarity=0.020 Sum_probs=175.0
Q ss_pred eccCCCCcceEEEeeccc------CCCCeEEEEEecCCCCeEEEeeee-c---cccceEEeeecCCCCceEEEEeecCCc
Q 019059 21 DVKADTDHTSFLTGTLSL------KEENEVHLLRLSSGGTELICEGLF-S---HPNEIWDLSSCPFDQRIFSTVFSTGES 90 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~-~---h~~~v~~~~~~~~~~~l~~~~~~~~~d 90 (346)
.+.+++++.+++++.... ..++.|.+|+....+ .+....+. . +......++++|++++|+++. .+.+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n--~~~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN--ASPA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE--ESSS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-EEEEEEcCccccccCCCcceEEECCCCCEEEEEC--CCCC
Confidence 677888888888775311 124568888765422 11111111 1 224567899999999998873 1236
Q ss_pred ceEEEEecCcccCCCCCccceeeee-eeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeee--cccCCC
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAA-LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS--KQSSGM 167 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~ 167 (346)
+.|.+||+. ..+.+.. +.. . ....+.+.|++...+++.+.||.+.+|++........... ......
T Consensus 131 ~~v~v~d~~---------~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 131 TSIGIVDVA---------KGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEEEETT---------TTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred CeEEEEECC---------CCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 799999998 5666666 532 2 2233567888765567778899999999875332221110 000000
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcc--ceee--c------c---c-eeEEEeCCCCCcEEEEec-----
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT--NSIE--H------A---H-VRNVDYDTKKKHLLVTAA----- 228 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~--~------~---~-v~~~~~~~~~~~~l~~~~----- 228 (346)
. ....+.+.|++..++..+.++.+.++|+...... ..+. . + . ...++|+|++..++++..
T Consensus 200 ~-~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 200 D-DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp T-SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred C-CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 1 1123334567777777788899999999765422 1111 0 0 0 223789999884555433
Q ss_pred -----CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccc
Q 019059 229 -----DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRA 303 (346)
Q Consensus 229 -----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (346)
..+.|.+||+.+ .+.+.++..+. +.+++|+|+| ++|++++. +.|.+||..+
T Consensus 279 ~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D~~t------------------- 334 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYDISQ------------------- 334 (361)
T ss_dssp TCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEECSS-------------------
T ss_pred ccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEECCC-------------------
Confidence 134899999997 55788887766 8999999999 78888886 9999999998
Q ss_pred c--ccccccccccceeeEEEeCCCCC
Q 019059 304 N--SLLNSYSDYEDSVYGLAWSSREP 327 (346)
Q Consensus 304 ~--~~~~~~~~~~~~v~~~~~~~~~~ 327 (346)
+ +.+..+..+......++++|+|+
T Consensus 335 ~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 335 PEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CcceeeEEeccCCCCcEEEEecCCCC
Confidence 7 78877656666678999999985
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=5.3e-15 Score=123.37 Aligned_cols=246 Identities=7% Similarity=-0.025 Sum_probs=160.3
Q ss_pred ccceEEeeecCCCCceEEE---EeecCCcceEEEEecCcccCCCCCccceeeeeee-----ccCCceEEEEeecC-CCCc
Q 019059 65 PNEIWDLSSCPFDQRIFST---VFSTGESYGAAIWQIPELYGQLNSPQLERIAALD-----AHVGKINCVLWWSS-GRHD 135 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~---~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~-~~~~ 135 (346)
-....+++|++++..++++ ...+..++.|.+|+.. ..+.. .+. ++...+.+++++++ +.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~---------~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~-- 84 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK---------TGKKT-VICKPEVNGYGGIPAGCQCDRDANQ-- 84 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT---------TCCEE-EEECCEETTEECCEEEEEECSSSSE--
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC---------CCcEE-EEEecccCCCCCCCceEEEecCCCc--
Confidence 3456789999888655550 0001256789999975 22222 221 24467899999999 66
Q ss_pred EEEEecCCeEEEEEcCCCCCCcee-eecccCCCceeeEEEEeCCCCCcEEEEecC---------------CeEEEEEccC
Q 019059 136 KLVSIDEENIFLWSLDCSNKNAQV-QSKQSSGMLHYLSGGAWDPHDVNAVAATCE---------------SSVQFWDLRS 199 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~ 199 (346)
++++...+.|.+||.+ ++. ..+ ...........+.+++++++++.+++...+ +.|..+|..
T Consensus 85 l~v~~~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp EEEEETTTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred EEEEECCCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 4444444589999987 432 222 111111122357899999998776666544 567777765
Q ss_pred CCccceeeccc-eeEEEeC----CCCCcEEEEecCCCeEEEEEcccCCc-----ceeeecCCC-cceEEEEeCCCCCcEE
Q 019059 200 MGKTNSIEHAH-VRNVDYD----TKKKHLLVTAADESGIHLWDLRMLKA-----PIQELPGHT-HWTWAVCCNPEYDGFI 268 (346)
Q Consensus 200 ~~~~~~~~~~~-v~~~~~~----~~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~v~~v~~~~~~~~~l 268 (346)
++......... ...++++ |+++.++++...++.|.+||+..... ....+..+. ..+..++++++| .++
T Consensus 162 g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~ 240 (314)
T 1pjx_A 162 GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN-NLL 240 (314)
T ss_dssp SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC-CEE
T ss_pred CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC-CEE
Confidence 44332222112 7889999 99864566666788999999863122 222333333 567889999999 888
Q ss_pred EEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 269 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++...++.|.+||..+ ++.+..+..+...+.+++|+|++..++++...++.|..|+++
T Consensus 241 v~~~~~~~i~~~d~~~-------------------g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDG-------------------GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEETTTEEEEECTTC-------------------BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEcCCCEEEEEcCCC-------------------CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 8777788999999886 455555555556789999999997566666667889998864
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=8.3e-17 Score=138.76 Aligned_cols=235 Identities=7% Similarity=-0.044 Sum_probs=146.7
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCc-eEEEEeecCCCCcEEEEecCCeE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGK-INCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
.+.+++|+|+|+.|+.+... +.+..|.+|++. ..+.. .+..+... ...+.|+|+|+. ++..+.++.|
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~-~g~~~l~~~d~~---------~~~~~-~l~~~~~~~~~~~~~spdg~~-l~~~~~~~~l 104 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDF-DGNRNYYLLNLE---------TQQAV-QLTEGKGDNTFGGFISTDERA-FFYVKNELNL 104 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECT-TSSCEEEEEETT---------TTEEE-ECCCSSCBCTTTCEECTTSSE-EEEEETTTEE
T ss_pred eeecCcCCCCCCEEEEEEec-CCCceEEEEECC---------CCcEE-EeecCCCCccccceECCCCCE-EEEEEcCCcE
Confidence 37788999999998876411 123467888876 33433 33333333 334789999995 4455567799
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEE-------------------EEeCCCCCcEEEE-----ecCCeEEEEEccCCC
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSG-------------------GAWDPHDVNAVAA-----TCESSVQFWDLRSMG 201 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~ 201 (346)
++||+.+++.. .+.... .. .... +.|+|+++.++.. ..+..|++||+.+++
T Consensus 105 ~~~d~~~~~~~-~~~~~~-~~---~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 105 MKVDLETLEEQ-VIYTVD-EE---WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp EEEETTTCCEE-EEEECC-TT---EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred EEEECCCCCcE-EEEecc-cc---cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 99999876532 222111 11 1111 4678888877654 346789999999887
Q ss_pred ccceeeccc-eeEEEeCC-CCCcEEEEecCC------CeEEEEEcccCCcceeeecCC--CcceEEEEeCCCCCcEEEEe
Q 019059 202 KTNSIEHAH-VRNVDYDT-KKKHLLVTAADE------SGIHLWDLRMLKAPIQELPGH--THWTWAVCCNPEYDGFILSA 271 (346)
Q Consensus 202 ~~~~~~~~~-v~~~~~~~-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~v~~v~~~~~~~~~l~s~ 271 (346)
......... +..+.|+| ++. .++..+.+ ..|.+||+.. . ....+..+ ...+..+.|+|+| +.|+.+
T Consensus 180 ~~~~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~spdg-~~l~~~ 255 (396)
T 3c5m_A 180 LEVIHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDG-S-NVRKIKEHAEGESCTHEFWIPDG-SAMAYV 255 (396)
T ss_dssp EEEEEEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTS-C-CCEESSCCCTTEEEEEEEECTTS-SCEEEE
T ss_pred EEeeccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCC-C-ceeEeeccCCCccccceEECCCC-CEEEEE
Confidence 654443233 89999999 676 44443333 3688888764 3 23333333 2357889999999 766655
Q ss_pred cCC-----CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC-CCCcEEEEee-----------
Q 019059 272 GTD-----STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS-REPWIFASLS----------- 334 (346)
Q Consensus 272 ~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~----------- 334 (346)
+.+ +.|++||+.+ ++.... ..... .. +.|+| +++ +++..+
T Consensus 256 ~~~~~~~~~~l~~~d~~~-------------------g~~~~l-~~~~~-~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 256 SYFKGQTDRVIYKANPET-------------------LENEEV-MVMPP-CS-HLMSNFDGS-LMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEETTTCCEEEEEECTTT-------------------CCEEEE-EECCS-EE-EEEECSSSS-EEEEEECCC--------
T ss_pred ecCCCCccceEEEEECCC-------------------CCeEEe-eeCCC-CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence 443 4599999986 332211 11111 22 88999 997 666544
Q ss_pred -----cCCeEEEeeec
Q 019059 335 -----YDGRVRNHMLE 345 (346)
Q Consensus 335 -----~d~~v~vw~~~ 345 (346)
.+..|++|+++
T Consensus 313 ~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTK 328 (396)
T ss_dssp --CCCCCCEEEEEETT
T ss_pred ccccCCCCcEEEEecc
Confidence 34789999875
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=3.5e-15 Score=125.61 Aligned_cols=242 Identities=9% Similarity=0.029 Sum_probs=159.5
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
..|.+++|+|++..++.. ..++.++.|.- +....+..+...+.+++|+++++ +++++..++.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i 68 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPI----ISESELQTITA------------EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNI 68 (333)
T ss_dssp CCCCBCCSCGGGGCSSCC----CCGGGSCEEEC------------EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEE
T ss_pred cccceeeecCCccceeEE----eecccCccccc------------ceeEEEeccCccccCcEECCCCC-EEEEECCCCEE
Confidence 457889999988777664 46778888832 33445556666789999999988 45566678999
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC----CeEEEEEccCCCccceee---ccc-eeEEEeC
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE----SSVQFWDLRSMGKTNSIE---HAH-VRNVDYD 217 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~---~~~-v~~~~~~ 217 (346)
.+||..+++.. .+.. .+...+.+++++|+++.+++...+ +.|.+||..+++....+. ... +.+++++
T Consensus 69 ~~~d~~~~~~~-~~~~----~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 69 FKINPETKEIK-RPFV----SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD 143 (333)
T ss_dssp EEECTTTCCEE-EEEE----CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC
T ss_pred EEEeCCCCcEE-EEee----CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC
Confidence 99998865422 2221 123378999999999866666555 689999998776542222 122 8999999
Q ss_pred CCCCcEEEEecC------CCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEE-EEecCCCeEEEEecCCCCCCCC
Q 019059 218 TKKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDEL 290 (346)
Q Consensus 218 ~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~ 290 (346)
|++. ++++... .+.|..+|... . .+..+......+..++|+|++ ..| ++.+.++.|.+||+........
T Consensus 144 ~~g~-l~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~i~~~d~~~~g~~~~ 219 (333)
T 2dg1_A 144 SKGG-FYFTDFRGYSTNPLGGVYYVSPDF-R-TVTPIIQNISVANGIALSTDE-KVLWVTETTANRLHRIALEDDGVTIQ 219 (333)
T ss_dssp TTSC-EEEEECCCBTTBCCEEEEEECTTS-C-CEEEEEEEESSEEEEEECTTS-SEEEEEEGGGTEEEEEEECTTSSSEE
T ss_pred CCCC-EEEEeccccccCCCceEEEEeCCC-C-EEEEeecCCCcccceEECCCC-CEEEEEeCCCCeEEEEEecCCCcCcc
Confidence 9997 6666543 24566666543 2 233333333457889999999 644 5556688999999864000000
Q ss_pred CcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 291 PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
. ........+.++ ..+..++++++|. ++++...++.|.+|+.+
T Consensus 220 ~----------~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 220 P----------FGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp E----------EEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECTT
T ss_pred c----------ccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECCC
Confidence 0 000001112222 3578899999997 77777778999999864
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.71 E-value=4.1e-15 Score=125.90 Aligned_cols=224 Identities=10% Similarity=0.104 Sum_probs=145.9
Q ss_pred cceEEeeecCCCCceEEEEeec-----CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe
Q 019059 66 NEIWDLSSCPFDQRIFSTVFST-----GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~-----~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
..+..+++ +|+.++.+.... ..++.|.+|++. ..+. ..+ ..+..++|+|||+++++++.
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~---------~~~~-~~l----~~~~~~~~SpDg~~la~~~~ 78 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLK---------NNAR-RFI----ENATMPRISPDGKKIAFMRA 78 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETT---------TCCE-EEE----ESCEEEEECTTSSEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCC---------CCce-EEc----ccCCCeEECCCCCEEEEEEe
Confidence 45667777 788887754221 225678899987 3332 223 46788999999997555553
Q ss_pred cC--C--eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC---------------------------
Q 019059 141 DE--E--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--------------------------- 189 (346)
Q Consensus 141 ~d--~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------------------- 189 (346)
.+ + .|.+|++.+++. ..+... .. +..++|+|+++.|+.++.+
T Consensus 79 ~~~~~~~~l~~~~~~~g~~-~~l~~~-----~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 79 NEEKKVSEIWVADLETLSS-KKILEA-----KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp ETTTTEEEEEEEETTTTEE-EEEEEE-----SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred ccCCCcceEEEEECCCCce-EEEEcC-----CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 32 3 477778775432 222211 12 8889999999998887642
Q ss_pred CeEEEEEccCCCccceeeccceeEEEeCCCCCcEEEEecCCC-------eEEEEEcccCCcceeeecCCCcceEEEEeCC
Q 019059 190 SSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADES-------GIHLWDLRMLKAPIQELPGHTHWTWAVCCNP 262 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~ 262 (346)
..|++||+.+++....+....+..++|+|++ +++++..++ ...+|.+.. +. ...+..+ ..+..+ +|
T Consensus 152 ~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEKPRFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GK-EEKMFEK-VSFYAV--DS 224 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEETTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TE-EEEEEEE-ESEEEE--EE
T ss_pred ceEEEEECCCCeEEeeecCCCcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cc-eEEeccC-cceeeE--CC
Confidence 5799999988876333332147889999999 566554432 445555542 33 3444444 455544 99
Q ss_pred CCCcEEEEecCC--------CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE-EEeCCCCCcEEEEe
Q 019059 263 EYDGFILSAGTD--------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG-LAWSSREPWIFASL 333 (346)
Q Consensus 263 ~~~~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~s~ 333 (346)
+| +.|+.++.+ ..|.+|| . ++.......+...+.. +.|+ ++ +++++
T Consensus 225 dg-~~l~~~~~~~~~~~~~~~~l~~~d--~-------------------~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~ 279 (347)
T 2gop_A 225 DG-ERILLYGKPEKKYMSEHNKLYIYD--G-------------------KEVMGILDEVDRGVGQAKIKD-GK--VYFTL 279 (347)
T ss_dssp CS-SCEEEEECCSSSCCCSSCEEEEEC--S-------------------SCEEESSTTCCSEEEEEEEET-TE--EEEEE
T ss_pred CC-CEEEEEEccccCCccccceEEEEC--C-------------------CceEeccccCCcccCCccEEc-Cc--EEEEE
Confidence 99 777666543 4688888 4 3444444556667886 9999 75 78889
Q ss_pred ecCCeEEEeeec
Q 019059 334 SYDGRVRNHMLE 345 (346)
Q Consensus 334 ~~d~~v~vw~~~ 345 (346)
+.++.++|| ++
T Consensus 280 ~~~~~~~l~-~~ 290 (347)
T 2gop_A 280 FEEGSVNLY-IW 290 (347)
T ss_dssp EETTEEEEE-EE
T ss_pred ecCCcEEEE-Ec
Confidence 999999999 74
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.9e-14 Score=134.16 Aligned_cols=249 Identities=12% Similarity=0.036 Sum_probs=156.9
Q ss_pred cccceEEeeecCCCCceEEEEeecCCc-ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
|...+..++|||||+.|+.+...+|.+ ..|++||+. .++.+.. ..+...+..++|+|| +.++++....
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~---------tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVA---------DGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETT---------TCCEEEE-EEEEEESCCCEESTT-SEEEEEECCC
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECC---------CCCCCCc-cCCCceeccEEEECC-CEEEEEEecC
Confidence 334788999999999998876544443 579999998 4444322 122223467899999 7644444222
Q ss_pred -------------CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCC--Cc
Q 019059 143 -------------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSM--GK 202 (346)
Q Consensus 143 -------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~--~~ 202 (346)
..|++|++.++.....+.... ..+...+..+.|+|||+.|+..+.+ ..|++||+.++ ++
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcc
Confidence 248999987655322232221 2222357889999999998887754 38999999877 41
Q ss_pred cceeeccc--eeEEEeCCCCCcEEEEecC---CCeEEEEEcccC-CcceeeecCCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 203 TNSIEHAH--VRNVDYDTKKKHLLVTAAD---ESGIHLWDLRML-KAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 203 ~~~~~~~~--v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~-~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
...+.... ..... +|++..+++.... ++.|.+||+... ......+..+...+..+.|+ ++ .++++...|+.
T Consensus 309 ~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~-~lv~~~~~dg~ 385 (741)
T 1yr2_A 309 VTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN-RLFASYIHDAK 385 (741)
T ss_dssp CEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT-EEEEEEEETTE
T ss_pred cEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC-EEEEEEEECCE
Confidence 34444222 44443 3888844444332 356999998753 12233334444556677777 45 78888899998
Q ss_pred EEEEecCCCCCCCCCcccccCCcccccccccccccc-ccceeeEEEeCCCCCcEEEEee---cCCeEEEeeec
Q 019059 277 VNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWIFASLS---YDGRVRNHMLE 345 (346)
Q Consensus 277 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~---~d~~v~vw~~~ 345 (346)
.+||.+.. .+.....+.. +...+..+.++|+++.++++.+ ..++|++||+.
T Consensus 386 ~~l~~~~~------------------~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 386 SQVLAFDL------------------DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EEEEEEET------------------TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EEEEEEeC------------------CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 88876652 1333444443 3566889999999875554444 34779999874
No 186
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=6.1e-13 Score=109.87 Aligned_cols=276 Identities=8% Similarity=-0.037 Sum_probs=173.2
Q ss_pred eEeeeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEE
Q 019059 17 RCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIW 96 (346)
Q Consensus 17 ~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw 96 (346)
..+..+..++++. +.+++. .++.+..++.. +. ........+...+.++++.+++...++. ..++.|..|
T Consensus 15 ~~~~~i~~d~~g~-l~v~~~---~~~~v~~~d~~--~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~----~~~~~i~~~ 83 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQH---KANMISCINLD--GK-ITEYPLPTPDAKVMCLTISSDGEVWFTE----NAANKIGRI 83 (299)
T ss_dssp CCEEEEEECTTSC-EEEEET---TTTEEEEECTT--CC-EEEEECSSTTCCEEEEEECTTSCEEEEE----TTTTEEEEE
T ss_pred CCccceEECCCCC-EEEEec---CCCcEEEEcCC--CC-eEEecCCcccCceeeEEECCCCCEEEeC----CCCCeEEEE
Confidence 3455566666665 444431 24567666544 22 2222222345678999999988766553 446788888
Q ss_pred ecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe
Q 019059 97 QIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW 176 (346)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 176 (346)
+... .. ....+......+.++++.+++. ++++...++.|.+||. ++. ....... .....+..+++
T Consensus 84 ~~~g--------~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~-~~~~~~~---~~~~~~~~i~~ 148 (299)
T 2z2n_A 84 TKKG--------II-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGK-IREYELP---NKGSYPSFITL 148 (299)
T ss_dssp CTTS--------CE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCC-EEEEECS---STTCCEEEEEE
T ss_pred CCCC--------cE-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCC-EEEecCC---CCCCCCceEEE
Confidence 8641 11 1111222445789999999887 4555555789999998 333 2222111 12336789999
Q ss_pred CCCCCcEEEEecCCeEEEEEccCCCccceeecc--c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCc
Q 019059 177 DPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTH 253 (346)
Q Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 253 (346)
.+++..+++...++.|..||. +++........ . +.++++++++. ++++...++.|.+||. +..........+..
T Consensus 149 ~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 225 (299)
T 2z2n_A 149 GSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITEFKIPTPNA 225 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEEEEECCCCCC
Confidence 999876665556789999998 55543321111 2 88999999987 7777767789999998 42311111233456
Q ss_pred ceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccc-cccccccceeeEEEeCCCCCcEEEE
Q 019059 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL-NSYSDYEDSVYGLAWSSREPWIFAS 332 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s 332 (346)
.+.+++++++| .++++...++.|..||... +.. ..+..+...+.++++ +++. ++++
T Consensus 226 ~~~~i~~~~~g-~l~v~~~~~~~i~~~d~~g--------------------~~~~~~~~~~~~~~~~i~~-~~g~-l~v~ 282 (299)
T 2z2n_A 226 RPHAITAGAGI-DLWFTEWGANKIGRLTSNN--------------------IIEEYPIQIKSAEPHGICF-DGET-IWFA 282 (299)
T ss_dssp CEEEEEECSTT-CEEEEETTTTEEEEEETTT--------------------EEEEEECSSSSCCEEEEEE-CSSC-EEEE
T ss_pred CceeEEECCCC-CEEEeccCCceEEEECCCC--------------------ceEEEeCCCCCCccceEEe-cCCC-EEEE
Confidence 78999999999 7777666778999999842 211 112334456899999 8886 6665
Q ss_pred eecCCeEEEeeec
Q 019059 333 LSYDGRVRNHMLE 345 (346)
Q Consensus 333 ~~~d~~v~vw~~~ 345 (346)
.. .+.+..++.+
T Consensus 283 ~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 283 ME-CDKIGKLTLI 294 (299)
T ss_dssp ET-TTEEEEEEEC
T ss_pred ec-CCcEEEEEcC
Confidence 55 4566666654
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=1.3e-14 Score=119.49 Aligned_cols=200 Identities=12% Similarity=0.119 Sum_probs=141.7
Q ss_pred ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec-ccCCCceeeEEEEe-CCCCCcEEEEec-CCeEEE
Q 019059 118 AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAW-DPHDVNAVAATC-ESSVQF 194 (346)
Q Consensus 118 ~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~i 194 (346)
++-..+.++++++++. ++++...++.|.+||.. ++....+... ...++...+..+++ .+++..+++... ++.|++
T Consensus 27 g~~~~p~~v~~~~~g~-l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQND-IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCC-EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCC-EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3445688999999987 45555678999999976 3322222111 11233446789999 466655555433 789999
Q ss_pred EEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec--CCCcceEEEEeCCCCCcEEE
Q 019059 195 WDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP--GHTHWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 195 ~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~v~~~~~~~~~l~ 269 (346)
|| .+++....+...+ +.+++++|++. ++++...++.|.+||.. ...+..+. .+...+..++++|++ .+++
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g-~l~v 179 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQ-EIFI 179 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSS-EEEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCC-CEEE
Confidence 99 5566655554332 89999999997 88887888999999965 33444443 344568999999999 8888
Q ss_pred EecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccc--cceeeEEEeCCCCCcEEEEeecCC-eEEEeeec
Q 019059 270 SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY--EDSVYGLAWSSREPWIFASLSYDG-RVRNHMLE 345 (346)
Q Consensus 270 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~d~-~v~vw~~~ 345 (346)
+...++.|++||... +.+..+..+ ...+..++++|+|. ++++...++ .|++|+.+
T Consensus 180 ~~~~~~~i~~~~~~g--------------------~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEG--------------------QYLRQIGGEGITNYPIGVGINSNGE-ILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEGGGTEEEEEETTC--------------------CEEEEESCTTTSCSEEEEEECTTCC-EEEEECSSSCEEEEECTT
T ss_pred EECCCCEEEEEcCCC--------------------CEEEEEccCCccCCCcEEEECCCCC-EEEEeCCCCEEEEEECCC
Confidence 888899999999854 444444332 34688999999996 888887776 99999865
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=4e-13 Score=110.98 Aligned_cols=238 Identities=5% Similarity=-0.066 Sum_probs=160.4
Q ss_pred ccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC
Q 019059 63 SHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 63 ~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
.+...+.++++.+++...++. ..++.|.+|+... ... ......+...+.++++.+++. ++++...+
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~----~~~~~v~~~d~~~--------~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~ 77 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQ----HKANMISCINLDG--------KIT-EYPLPTPDAKVMCLTISSDGE-VWFTENAA 77 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEE----TTTTEEEEECTTC--------CEE-EEECSSTTCCEEEEEECTTSC-EEEEETTT
T ss_pred CcCCCccceEECCCCCEEEEe----cCCCcEEEEcCCC--------CeE-EecCCcccCceeeEEECCCCC-EEEeCCCC
Confidence 345678999999998766653 4467899998651 111 111223456789999999987 45554557
Q ss_pred CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeec--cc-eeEEEeCCC
Q 019059 143 ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTK 219 (346)
Q Consensus 143 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~-v~~~~~~~~ 219 (346)
+.|..||.. +. ...... ......+.++++.+++..+++...++.|..||. +++....... .. +..++++++
T Consensus 78 ~~i~~~~~~-g~-~~~~~~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 78 NKIGRITKK-GI-IKEYTL---PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp TEEEEECTT-SC-EEEEEC---SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred CeEEEECCC-Cc-EEEEeC---CCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 889999976 22 222211 112336889999998876666666889999998 5543322211 12 899999999
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcceee-ecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCC
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAPIQE-LPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVES 298 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 298 (346)
+. ++++...++.|..||. + ...... +......+..+++++++ .++++...++.|.+||. .
T Consensus 152 g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~-------------- 212 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-S-------------- 212 (299)
T ss_dssp SC-EEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-T--------------
T ss_pred CC-EEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-C--------------
Confidence 97 7777777789999998 4 322221 23344568899999999 77777767889999998 4
Q ss_pred cccccccccc-ccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 299 PNQRANSLLN-SYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 299 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++... ....+...+.+++++++|. ++++...++.|..|+.+
T Consensus 213 -----g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 213 -----GEITEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -----CCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEETT
T ss_pred -----CcEEEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECCC
Confidence 22211 1223445688999999986 77776677889888853
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=2e-14 Score=120.83 Aligned_cols=223 Identities=13% Similarity=0.047 Sum_probs=148.3
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee-----
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----- 116 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----- 116 (346)
+.+++++... ..+....-.++-.....++++|++..+++ ...++.|++|+... ....+..+
T Consensus 69 ~~i~~~d~~~--g~~~~~~~~~~~~~p~gia~d~~g~l~v~----d~~~~~v~~~~~~g--------~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNN--AEILQSSGKNLFYLPHGLSIDTDGNYWVT----DVALHQVFKLDPHS--------KEGPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTT--CCEEEEECTTTCSSEEEEEECTTSCEEEE----ETTTTEEEEECTTC--------SSCCSEEESBTTB
T ss_pred CcEEEEECCC--CeEEeccCCCccCCceEEEECCCCCEEEE----ECCCCEEEEEeCCC--------CeEEEEEecccCC
Confidence 3566664432 33332222234467899999999985544 35678999999751 11133333
Q ss_pred ----eccCCceEEEEeec-CCCCcEEEEe-cCCeEEEEEcCCCCCCceeeeccc-----CCCceeeEEEEeCCC-CCcEE
Q 019059 117 ----DAHVGKINCVLWWS-SGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQS-----SGMLHYLSGGAWDPH-DVNAV 184 (346)
Q Consensus 117 ----~~~~~~i~~~~~~~-~~~~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~~~l~ 184 (346)
..+-.....++++| ++. ++++.+ .++.|++|+.. +.....+..... .++.....+++++|+ +..++
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 23344688999999 555 555555 58999999954 332222211111 123335789999998 55555
Q ss_pred EEecCCeEEEEEccCCCccceeecc---c-eeEEEeCCCCCcEEEE-------ecCCCeEEEEEcccCCcceeee---cC
Q 019059 185 AATCESSVQFWDLRSMGKTNSIEHA---H-VRNVDYDTKKKHLLVT-------AADESGIHLWDLRMLKAPIQEL---PG 250 (346)
Q Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~~~~---~-v~~~~~~~~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~~---~~ 250 (346)
+...++.|++||..+++.+..+... . +..++|+| +. ++.+ ...+..|++||+.+ ...+..+ ..
T Consensus 213 ~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~-~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~~~~~~ 289 (329)
T 3fvz_A 213 ADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF-LFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVFKPVRK 289 (329)
T ss_dssp EETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE-EEEEECCCCTTCSCCCCEEEEETTT-CCEEEEECCSSS
T ss_pred EECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE-EEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEEcCCCC
Confidence 5556889999999988877776422 2 88999999 32 3333 33445899999887 5566666 35
Q ss_pred CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 251 ~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+...+..|+++|+| .++++...++.|++|++..
T Consensus 290 ~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 290 HFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred ccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 66778999999999 9999999999999999875
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.68 E-value=1.3e-13 Score=114.18 Aligned_cols=233 Identities=9% Similarity=0.045 Sum_probs=155.4
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
.-..+..|+|++..|+.+ ....+.|..|+.. ..+. ..+ .....+.+++++++++ ++++. ++.|
T Consensus 13 ~~~Egp~w~~~~~~l~~~---d~~~~~i~~~d~~---------~~~~-~~~-~~~~~~~~i~~~~dG~--l~v~~-~~~l 75 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFV---DIPAKKVCRWDSF---------TKQV-QRV-TMDAPVSSVALRQSGG--YVATI-GTKF 75 (297)
T ss_dssp SBEEEEEEETTTTEEEEE---ETTTTEEEEEETT---------TCCE-EEE-ECSSCEEEEEEBTTSS--EEEEE-TTEE
T ss_pred ccccCCeEECCCCEEEEE---ECCCCEEEEEECC---------CCcE-EEE-eCCCceEEEEECCCCC--EEEEE-CCeE
Confidence 345678999987777765 3567899999986 2222 223 3456799999999998 44444 6789
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC---------CeEEEEEccCCCccceeecc-c-eeEE
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE---------SSVQFWDLRSMGKTNSIEHA-H-VRNV 214 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~-~-v~~~ 214 (346)
.+||.++++. ..+...........++.++++|+++.+++.... ..-.+|.+........+... . .+.+
T Consensus 76 ~~~d~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi 154 (297)
T 3g4e_A 76 CALNWKEQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGL 154 (297)
T ss_dssp EEEETTTTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEE
T ss_pred EEEECCCCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccce
Confidence 9999876542 222221111223468899999999866554321 22344444432222222212 2 8899
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcc-cCCc-----ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCC
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLR-MLKA-----PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~-----~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 288 (346)
+|+|+++.++++.+.++.|.+||+. .... ....+..+...+..++++++| ++.++...++.|.+||..+
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~t---- 229 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVT---- 229 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTT----
T ss_pred EEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCC----
Confidence 9999998566777778899999974 2121 122233334567889999999 8777777788999999987
Q ss_pred CCCcccccCCccccccccccccccccceeeEEEeC-CCCCcEEEEeecC
Q 019059 289 ELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYD 336 (346)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d 336 (346)
++.+..+..+...+++++|. |+++.++++...+
T Consensus 230 ---------------G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 ---------------GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ---------------CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ---------------ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 77777777666679999998 8887666666544
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=6.8e-13 Score=118.69 Aligned_cols=290 Identities=9% Similarity=0.039 Sum_probs=188.3
Q ss_pred eccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeec----CCCCceEEEEeecCCcceEEEE
Q 019059 21 DVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSC----PFDQRIFSTVFSTGESYGAAIW 96 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~l~~~~~~~~~d~~i~vw 96 (346)
.+.+++++..++++. .++.+.+++++....... ..+.. ......++|+ |++++++++. ..++.|.|+
T Consensus 201 ~v~~SpDGr~lyv~~----~dg~V~viD~~~~t~~~v-~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n---~~~~~v~Vi 271 (567)
T 1qks_A 201 ISRLSASGRYLFVIG----RDGKVNMIDLWMKEPTTV-AEIKI-GSEARSIETSKMEGWEDKYAIAGA---YWPPQYVIM 271 (567)
T ss_dssp EEEECTTSCEEEEEE----TTSEEEEEETTSSSCCEE-EEEEC-CSEEEEEEECCSTTCTTTEEEEEE---EETTEEEEE
T ss_pred ceEECCCCCEEEEEc----CCCeEEEEECCCCCCcEe-EEEec-CCCCceeEEccccCCCCCEEEEEE---ccCCeEEEE
Confidence 355777887777764 467899999873223333 23222 3346789999 6999998874 355789999
Q ss_pred ecCcccCCCCCccceeeeeeec----------cCC-ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC
Q 019059 97 QIPELYGQLNSPQLERIAALDA----------HVG-KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
|.. +.+++..+.. |.. .+..+..++++..+++....+|.|.++|........ ......
T Consensus 272 D~~---------t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v~~i~~- 340 (567)
T 1qks_A 272 DGE---------TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEISA- 340 (567)
T ss_dssp ETT---------TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-EEEEEC-
T ss_pred ECC---------CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-eeeeec-
Confidence 987 5666665532 212 677888899887544444667999999987543211 111111
Q ss_pred CCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeec-cc----eeEEE-eCCCCCcEEEEec-CCCeEEEEE
Q 019059 166 GMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEH-AH----VRNVD-YDTKKKHLLVTAA-DESGIHLWD 237 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~----v~~~~-~~~~~~~~l~~~~-~dg~i~i~d 237 (346)
......+.|+|++++++++. .++.|.++|+.+++....+.. +. -.... ++|++..+++++. .++.|.++|
T Consensus 341 --~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid 418 (567)
T 1qks_A 341 --ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIG 418 (567)
T ss_dssp --CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEE
T ss_pred --cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEec
Confidence 12466789999999988877 478999999999987766654 22 12333 5787543666654 468999999
Q ss_pred cccCC------cceeeecCCCcceEEEEeCCCCCcEEEEecC-------CCeEEEEecCCCCC--CCCCcccccCCcccc
Q 019059 238 LRMLK------APIQELPGHTHWTWAVCCNPEYDGFILSAGT-------DSTVNLWLVSTSNH--DELPSESLVESPNQR 302 (346)
Q Consensus 238 ~~~~~------~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~-------d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~ 302 (346)
....+ +.++++......-..+..+|++ +++.+... .++|.++|+.+... ...
T Consensus 419 ~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~------------ 485 (567)
T 1qks_A 419 TDPEGHPDNAWKILDSFPALGGGSLFIKTHPNS-QYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP------------ 485 (567)
T ss_dssp CCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC-SEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC------------
T ss_pred CCCCCCccccCEEEEEEecCCCCCEEEEeCCCC-CeEEEecCCCCCcccCceEEEEECCcccccccCC------------
Confidence 87521 2456666544444567899999 77776552 35899999987200 000
Q ss_pred cccccc-----ccccccceeeEEEeCCCCCcEEEEee----cCCeEEEeeec
Q 019059 303 ANSLLN-----SYSDYEDSVYGLAWSSREPWIFASLS----YDGRVRNHMLE 345 (346)
Q Consensus 303 ~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~s~~----~d~~v~vw~~~ 345 (346)
..+.+. .+......+..+.|+|+|..++++.. .++.|.|+|..
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 001111 11112346889999999997777754 37889998854
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.64 E-value=3.5e-13 Score=120.57 Aligned_cols=219 Identities=13% Similarity=0.045 Sum_probs=153.1
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcC--CCCCCceeeeccc
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLD--CSNKNAQVQSKQS 164 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~ 164 (346)
...++.|.++|.. +.+.+.++... ..+..+.|+|||++ +++++.++.|.+||+. +.+...++..
T Consensus 173 ~~~~~~V~viD~~---------t~~v~~~i~~g-~~p~~v~~SpDGr~-lyv~~~dg~V~viD~~~~t~~~v~~i~~--- 238 (567)
T 1qks_A 173 LRDAGQIALIDGS---------TYEIKTVLDTG-YAVHISRLSASGRY-LFVIGRDGKVNMIDLWMKEPTTVAEIKI--- 238 (567)
T ss_dssp ETTTTEEEEEETT---------TCCEEEEEECS-SCEEEEEECTTSCE-EEEEETTSEEEEEETTSSSCCEEEEEEC---
T ss_pred eCCCCeEEEEECC---------CCeEEEEEeCC-CCccceEECCCCCE-EEEEcCCCeEEEEECCCCCCcEeEEEec---
Confidence 3678899999998 67777777543 35679999999996 5566779999999995 4433322222
Q ss_pred CCCceeeEEEEeC----CCCCcEEEEec-CCeEEEEEccCCCccceeecc-------------ceeEEEeCCCCCcEEEE
Q 019059 165 SGMLHYLSGGAWD----PHDVNAVAATC-ESSVQFWDLRSMGKTNSIEHA-------------HVRNVDYDTKKKHLLVT 226 (346)
Q Consensus 165 ~~~~~~v~~~~~~----~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~-------------~v~~~~~~~~~~~~l~~ 226 (346)
+ .....++|+ |+|++++++.. ++.+.++|..+.+.+..+... .+..+..+++++.+++.
T Consensus 239 -G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 239 -G--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp -C--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred -C--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 1 146789999 69999888875 699999999998877665421 26788889988866777
Q ss_pred ecCCCeEEEEEcccCCcc-eeeecCCCcceEEEEeCCCCCcEEE-EecCCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 227 AADESGIHLWDLRMLKAP-IQELPGHTHWTWAVCCNPEYDGFIL-SAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 227 ~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
...+|.|.++|....... +..+ ........+.|+|++ ++|+ +...++.|.++|+.+ +
T Consensus 316 ~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg-r~~~va~~~sn~V~ViD~~t-------------------~ 374 (567)
T 1qks_A 316 VKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSH-RYFITAANARNKLVVIDTKE-------------------G 374 (567)
T ss_dssp ETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTS-CEEEEEEGGGTEEEEEETTT-------------------T
T ss_pred ecCCCeEEEEecCCCccceeeee-eccccccCceECCCC-CEEEEEeCCCCeEEEEECCC-------------------C
Confidence 777899999998753321 2222 234456788999999 6654 455678999999998 5
Q ss_pred cccccccc-----ccceeeEEE-eCCCCCcEEEEee-cCCeEEEeeec
Q 019059 305 SLLNSYSD-----YEDSVYGLA-WSSREPWIFASLS-YDGRVRNHMLE 345 (346)
Q Consensus 305 ~~~~~~~~-----~~~~v~~~~-~~~~~~~~l~s~~-~d~~v~vw~~~ 345 (346)
+.+..+.- |.+ ..+. ++|++..++++.. .++.|.+++.+
T Consensus 375 kl~~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPG--RGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp EEEEEEECSSSSBCCT--TCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cEEEEEeccCcCCCCc--cceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 54443322 322 1222 5787554555553 46889999864
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=8.7e-14 Score=129.13 Aligned_cols=237 Identities=10% Similarity=0.018 Sum_probs=148.5
Q ss_pred cCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeee---ee-eccCCceEEEEeecCCCCcEEEEecCC----eE
Q 019059 74 CPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIA---AL-DAHVGKINCVLWWSSGRHDKLVSIDEE----NI 145 (346)
Q Consensus 74 ~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~~~~~~d~----~i 145 (346)
+|+|++++.....++.. .-.+|-.+.. ....+.+. .+ ..|...+..++|||||++++++...+| .|
T Consensus 80 ~~dG~~~~~~~~~~~~~-~~~l~~~~~~-----~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQN-QRVLYVQDSL-----EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTI 153 (710)
T ss_dssp EEETTEEEEEEECSSCS-SCEEEEESST-----TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEE
T ss_pred EEECCEEEEEEEcCCce-EEEEEEEcCC-----CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEE
Confidence 38898888775433322 1234544311 01112111 11 124446889999999997555554444 89
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCe----------------EEEEEccCCCcc--ceee
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS----------------VQFWDLRSMGKT--NSIE 207 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~i~d~~~~~~~--~~~~ 207 (346)
++||+.+++........ ..+..++|+||++.|+.+..++. |++|++.+++.. ..+.
T Consensus 154 ~v~d~~tg~~~~~~~~~------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~ 227 (710)
T 2xdw_A 154 KFMKVDGAKELPDVLER------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAE 227 (710)
T ss_dssp EEEETTTTEEEEEEEEE------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEEC
T ss_pred EEEECCCCCCCcccccC------cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEec
Confidence 99999876543222211 13567999999999999887655 999999887632 2122
Q ss_pred c-cc---eeEEEeCCCCCcEEEEecC----CCeEEEEEccc------CCcceeeecCCCcceEEEEeCCCCCcEEEEecC
Q 019059 208 H-AH---VRNVDYDTKKKHLLVTAAD----ESGIHLWDLRM------LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 208 ~-~~---v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~------~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~ 273 (346)
. .+ +..+.|+|++++++++... +..|++||+.. .......+..+...+.. .|+|+| ..|+..+.
T Consensus 228 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg-~~l~~~s~ 305 (710)
T 2xdw_A 228 FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEG-TVFTFKTN 305 (710)
T ss_dssp CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEET-TEEEEEEC
T ss_pred cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccC-CEEEEEEC
Confidence 1 12 7799999999954444331 56899999975 33245666666666655 488898 55554443
Q ss_pred -C---CeEEEEecCCCCCCCCCcccccCCccccccc--cccccccccc--eeeEEEeCCCCCcEEEEeecCCeEEE--ee
Q 019059 274 -D---STVNLWLVSTSNHDELPSESLVESPNQRANS--LLNSYSDYED--SVYGLAWSSREPWIFASLSYDGRVRN--HM 343 (346)
Q Consensus 274 -d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~d~~v~v--w~ 343 (346)
+ ..|.+||+.. +. ....+..|.. .+.++.|++++ .++++...|+..+| |+
T Consensus 306 ~~~~~~~l~~~d~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 306 RHSPNYRLINIDFTD-------------------PEESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp TTCTTCEEEEEETTS-------------------CCGGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEE
T ss_pred CCCCCCEEEEEeCCC-------------------CCcccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEE
Confidence 3 3699999886 32 1233334433 68889999766 48888888986554 55
Q ss_pred e
Q 019059 344 L 344 (346)
Q Consensus 344 ~ 344 (346)
+
T Consensus 366 ~ 366 (710)
T 2xdw_A 366 L 366 (710)
T ss_dssp T
T ss_pred C
Confidence 4
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=8e-14 Score=115.32 Aligned_cols=200 Identities=9% Similarity=0.007 Sum_probs=138.7
Q ss_pred eeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeE
Q 019059 113 IAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV 192 (346)
Q Consensus 113 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 192 (346)
+..+..+.....+++|+|+++.+++++..++.|..|+..++ ...+.. +...+.+++++|+++.+++...++.|
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-----~~~~~~~l~~~~dg~l~v~~~~~~~i 92 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-----PSHHQNGHCLNKQGHLIACSHGLRRL 92 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-----SCSSEEEEEECTTCCEEEEETTTTEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-----CCCCcceeeECCCCcEEEEecCCCeE
Confidence 34454556677899999999866777777899999999865 222211 23368899999999876666567899
Q ss_pred EEEEccCCCccceeec--cc----eeEEEeCCCCCcEEEE----ec-------------CCCeEEEEEcccCCcceeeec
Q 019059 193 QFWDLRSMGKTNSIEH--AH----VRNVDYDTKKKHLLVT----AA-------------DESGIHLWDLRMLKAPIQELP 249 (346)
Q Consensus 193 ~i~d~~~~~~~~~~~~--~~----v~~~~~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~ 249 (346)
.+||..+++....... .. +..++++|+|. ++++ |. ..+.|..++.. + .+..+.
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g-~~~~~~ 168 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--G-TLSAPI 168 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--S-CEEEEE
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--C-CEEEee
Confidence 9999987764332211 11 67899999998 7776 32 12455555544 2 344455
Q ss_pred CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccc---ccccccccceeeEEEeCCCC
Q 019059 250 GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL---LNSYSDYEDSVYGLAWSSRE 326 (346)
Q Consensus 250 ~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~ 326 (346)
.+......++|+|++ ..+++.+.++.|.+|++.. .+.. ...+..+...+.+++++++|
T Consensus 169 ~~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~------------------~g~~~~~~~~~~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNA------------------RGETEYQGVHFTVEPGKTDGLRVDAGG 229 (296)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTTEEEEEEECS------------------SSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred cCCCCCccEEECCCC-CEEEEeCCCCeEEEEEECC------------------CCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence 566778999999999 7778888889999999872 0221 11112244457789999999
Q ss_pred CcEEEEeecCCeEEEeeec
Q 019059 327 PWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 327 ~~~l~s~~~d~~v~vw~~~ 345 (346)
. ++++. ++.|.+|+.+
T Consensus 230 ~-l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 230 L-IWASA--GDGVHVLTPD 245 (296)
T ss_dssp C-EEEEE--TTEEEEECTT
T ss_pred C-EEEEc--CCeEEEECCC
Confidence 7 66655 7889999865
No 195
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.62 E-value=1.3e-12 Score=109.42 Aligned_cols=227 Identities=7% Similarity=-0.036 Sum_probs=147.1
Q ss_pred eEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEE
Q 019059 68 IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFL 147 (346)
Q Consensus 68 v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~v 147 (346)
..++.|+|+++.++.+ +..++.|..|+.+ ..+. ..+ .....+.++.|+++++ ++++. +..|.+
T Consensus 51 ~egp~~~~~~~~l~~~---d~~~~~i~~~d~~---------~~~~-~~~-~~~~~v~~i~~~~dg~--l~v~~-~~gl~~ 113 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWF---NILERELHELHLA---------SGRK-TVH-ALPFMGSALAKISDSK--QLIAS-DDGLFL 113 (326)
T ss_dssp EEEEEEETTTTEEEEE---EGGGTEEEEEETT---------TTEE-EEE-ECSSCEEEEEEEETTE--EEEEE-TTEEEE
T ss_pred CcCCeEeCCCCEEEEE---ECCCCEEEEEECC---------CCcE-EEE-ECCCcceEEEEeCCCe--EEEEE-CCCEEE
Confidence 4578899987777765 3456789999986 2222 223 2346799999999998 44444 345999
Q ss_pred EEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec------CCeEEEEEccCCCccceeecc-c-eeEEEeCCC
Q 019059 148 WSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC------ESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTK 219 (346)
Q Consensus 148 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~ 219 (346)
||..+++. ..+...........+..++++|+++.+++... .+.|..+| +++. ..+... . ...++|+|+
T Consensus 114 ~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~d 189 (326)
T 2ghs_A 114 RDTATGVL-TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPD 189 (326)
T ss_dssp EETTTCCE-EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTT
T ss_pred EECCCCcE-EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCC
Confidence 99876542 22221111112346889999999986655432 24566666 4432 222212 2 789999999
Q ss_pred CCcEEEEecCCCeEEEEEcc--cC-C----cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCc
Q 019059 220 KKHLLVTAADESGIHLWDLR--ML-K----APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPS 292 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~--~~-~----~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 292 (346)
++.++++...++.|.+||+. +. . .....+......+..++++++| .+.++...++.|.+||..
T Consensus 190 g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~--------- 259 (326)
T 2ghs_A 190 GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTD--------- 259 (326)
T ss_dssp SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTT---------
T ss_pred CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCC---------
Confidence 98555666677899999986 32 1 1122222334567889999999 777766667889999984
Q ss_pred ccccCCccccccccccccccccceeeEEEeC-CCCCcEEEEeecC
Q 019059 293 ESLVESPNQRANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYD 336 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d 336 (346)
++.+..+..+...+++++|+ |+++.++++...+
T Consensus 260 -----------g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 260 -----------GNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -----------CCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred -----------CCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 45555555555569999998 8877565665554
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=3.9e-13 Score=109.70 Aligned_cols=204 Identities=11% Similarity=-0.004 Sum_probs=151.8
Q ss_pred cCCcceEEEEecCcccCCCCCccceeeeeeeccC-CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC
Q 019059 87 TGESYGAAIWQIPELYGQLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 87 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
++.++.|.+||.+ +++.+-++..+. ..+.++.++|+|+ ++++ .++.|..||. +++...++...
T Consensus 11 ~~~~~~v~~~d~~---------tG~~~w~~~~~~~~~~~~~~~~pdG~--ilvs-~~~~V~~~d~-~G~~~W~~~~~--- 74 (276)
T 3no2_A 11 GSGWNKIAIINKD---------TKEIVWEYPLEKGWECNSVAATKAGE--ILFS-YSKGAKMITR-DGRELWNIAAP--- 74 (276)
T ss_dssp CTTCSEEEEEETT---------TTEEEEEEECCTTCCCCEEEECTTSC--EEEE-CBSEEEEECT-TSCEEEEEECC---
T ss_pred eCCCCEEEEEECC---------CCeEEEEeCCCccCCCcCeEECCCCC--EEEe-CCCCEEEECC-CCCEEEEEcCC---
Confidence 5789999999987 688888887765 4789999999998 4443 4788999998 66655554431
Q ss_pred CCceeeEEEEeCCCCCcEEEEec-CCeEEEEEccCCCccceeec------cc--eeEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATC-ESSVQFWDLRSMGKTNSIEH------AH--VRNVDYDTKKKHLLVTAADESGIHLW 236 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~------~~--v~~~~~~~~~~~~l~~~~~dg~i~i~ 236 (346)
....+.++.+.|+++.+++.+. ++.+..+|. +++.+..+.. .+ ...++..+++. ++++...++.|..|
T Consensus 75 -~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 75 -AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREI 151 (276)
T ss_dssp -TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEE
T ss_pred -CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEE
Confidence 1236788899999999998887 778888875 5665554431 12 55677889998 88888899999999
Q ss_pred EcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccccc--
Q 019059 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-- 314 (346)
Q Consensus 237 d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 314 (346)
|.. ++.+.++... ..+.++...+++ .++++++.++.|..+|..+ ++.+.++..+.
T Consensus 152 d~~--G~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~t-------------------G~~~w~~~~~~~~ 208 (276)
T 3no2_A 152 APN--GQLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLES-------------------NRIVRRVNANDIE 208 (276)
T ss_dssp CTT--SCEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTT-------------------CCEEEEEEGGGSB
T ss_pred CCC--CCEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcC-------------------CcEEEEecCCCCC
Confidence 986 4466667653 455667888999 8888888888999999997 66655554321
Q ss_pred ----ceeeEEEeCCCCCcEEEEe
Q 019059 315 ----DSVYGLAWSSREPWIFASL 333 (346)
Q Consensus 315 ----~~v~~~~~~~~~~~~l~s~ 333 (346)
..+..+...++|. ++++.
T Consensus 209 ~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 209 GVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp SCCCSEEEEEEECTTSC-EEEEE
T ss_pred CccccccccceEcCCCC-EEEEe
Confidence 2367888888886 65555
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=1.1e-11 Score=102.24 Aligned_cols=274 Identities=7% Similarity=-0.034 Sum_probs=168.4
Q ss_pred eeccCCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecC
Q 019059 20 SDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIP 99 (346)
Q Consensus 20 ~~~~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~ 99 (346)
..+..++++. +.++. ..++.+..++.. .......+..+...+.++++.+++...++. ..++.|..+|..
T Consensus 23 ~~i~~d~~g~-l~v~~---~~~~~v~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~----~~~~~v~~~d~~ 91 (300)
T 2qc5_A 23 YGITSSEDGK-VWFTQ---HKANKISSLDQS---GRIKEFEVPTPDAKVMCLIVSSLGDIWFTE----NGANKIGKLSKK 91 (300)
T ss_dssp EEEEECTTSC-EEEEE---TTTTEEEEECTT---SCEEEEECSSTTCCEEEEEECTTSCEEEEE----TTTTEEEEECTT
T ss_pred ceeeECCCCC-EEEEc---CCCCeEEEECCC---CceEEEECCCCCCcceeEEECCCCCEEEEe----cCCCeEEEECCC
Confidence 3444555554 33332 134566666543 222222222334678999999988755553 446778888865
Q ss_pred cccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC
Q 019059 100 ELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH 179 (346)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 179 (346)
. .. ....+......+.++++.+++. ++++...++.|..+|.. ++ ...... ......+..+++.++
T Consensus 92 g--------~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~-~~~~~~---~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 92 G--------GF-TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GT-IYEYDL---PNKGSYPAFITLGSD 156 (300)
T ss_dssp S--------CE-EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SC-EEEEEC---SSTTCCEEEEEECTT
T ss_pred C--------Ce-EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CC-EEEccC---CCCCCCceeEEECCC
Confidence 1 11 1112222346689999999887 45555557889999876 33 222211 112336789999999
Q ss_pred CCcEEEEecCCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceE
Q 019059 180 DVNAVAATCESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTW 256 (346)
Q Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 256 (346)
++..++...++.|..+|. +++......... +..+++++++. ++++....+.|.+||.. .......+..+...+.
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~ 233 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIMGNKIGRITTT-GEISEYDIPTPNARPH 233 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEE
T ss_pred CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEccCCCEEEEEcCC-CcEEEEECCCCCCCce
Confidence 885555545788999998 454332111111 89999999987 77776677789999983 2211122233456788
Q ss_pred EEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecC
Q 019059 257 AVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYD 336 (346)
Q Consensus 257 ~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 336 (346)
+++++++| .+.++...++.|..||... ......+......+.+++++++|. ++++.. .
T Consensus 234 ~i~~d~~g-~l~v~~~~~~~i~~~~~~g-------------------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-~ 291 (300)
T 2qc5_A 234 AITAGKNS-EIWFTEWGANQIGRITNDN-------------------TIQEYQLQTENAEPHGITFGKDGS-VWFALK-C 291 (300)
T ss_dssp EEEECSTT-CEEEEETTTTEEEEECTTS-------------------CEEEEECCSTTCCCCCEEECTTSC-EEEECS-S
T ss_pred EEEECCCC-CEEEeccCCCeEEEECCCC-------------------cEEEEECCccCCccceeEeCCCCC-EEEEcc-C
Confidence 99999999 7777766678999999843 111111222334578999999986 666555 4
Q ss_pred CeEEEeeec
Q 019059 337 GRVRNHMLE 345 (346)
Q Consensus 337 ~~v~vw~~~ 345 (346)
.|..++.+
T Consensus 292 -~i~~~~p~ 299 (300)
T 2qc5_A 292 -KIGKLNLN 299 (300)
T ss_dssp -EEEEEEEC
T ss_pred -ceEEeCCC
Confidence 77777764
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=8.6e-13 Score=113.90 Aligned_cols=238 Identities=6% Similarity=0.043 Sum_probs=157.8
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC--
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-- 143 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~-- 143 (346)
.....++|+|++. |+++ ...++.|++||.+ .......... ..... ++|+++++. ++++..++
T Consensus 131 ~~P~~la~d~~g~-lyv~---d~~~~~I~~id~~---------~g~~~~~~~~-~~~~~-ia~~~~g~~-l~~~d~~~~~ 194 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAY---QRDDPRVRLISVD---------DNKVTTVHPG-FKGGK-PAVTKDKQR-VYSIGWEGTH 194 (409)
T ss_dssp CCEEEEEECSTTE-EEEE---ETTTTEEEEEETT---------TTEEEEEEET-CCBCB-CEECTTSSE-EEEEBSSTTC
T ss_pred CCceEEEEeCCCC-EEEE---ecCCCcEEEEECC---------CCEEEEeecc-CCCCc-eeEecCCCc-EEEEecCCCc
Confidence 4678899999887 4443 3466899999987 3343333333 23334 999999985 55554433
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcccee---eccc--e--e-EEE
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI---EHAH--V--R-NVD 215 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~--v--~-~~~ 215 (346)
.|.+++.......... ..........+.+++++|++..|+++..++.|+.||..++...... ..+. . . .++
T Consensus 195 ~I~~~d~~~~~~~~~~-g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia 273 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRI-GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLI 273 (409)
T ss_dssp EEEEEEGGGTTCEEEE-EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEE
T ss_pred eEEEEEcCCCceeEEe-eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEE
Confidence 8888888755432222 1110112236788999996666777767889999999877532210 1112 2 3 999
Q ss_pred eCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC---------------cceEEEEeCCCCCcEEEEec-CCCeEEE
Q 019059 216 YDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT---------------HWTWAVCCNPEYDGFILSAG-TDSTVNL 279 (346)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------------~~v~~v~~~~~~~~~l~s~~-~d~~i~i 279 (346)
|+|++..++++-..++.|+.|+... . +..+.++. .....++++|+| .++++-. .++.|+.
T Consensus 274 ~~p~~g~lyv~d~~~~~I~~~~~~g-~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 274 YYFVDSNFYMSDQNLSSVYKITPDG-E--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRK 349 (409)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTC-C--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEecCC-C--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEE
Confidence 9996554788877888999998763 2 33333322 347899999999 7777877 8899999
Q ss_pred EecCCCCCCCCCcccccCCccccccccccccccc---------------cceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 280 WLVSTSNHDELPSESLVESPNQRANSLLNSYSDY---------------EDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
|++.. +. +.++.++ -.....++++|++. ++++-..+++|+.+++
T Consensus 350 ~~~~~-------------------G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILD-------------------GY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTT-------------------TE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred EECCC-------------------CE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 99765 21 1111111 23478999999975 8888888999999887
Q ss_pred c
Q 019059 345 E 345 (346)
Q Consensus 345 ~ 345 (346)
|
T Consensus 409 e 409 (409)
T 3hrp_A 409 E 409 (409)
T ss_dssp C
T ss_pred C
Confidence 5
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=4.1e-13 Score=124.26 Aligned_cols=237 Identities=11% Similarity=0.012 Sum_probs=146.4
Q ss_pred ecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee----eccCCceEEEEeecCCCCcEEEEec----CCe
Q 019059 73 SCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----DAHVGKINCVLWWSSGRHDKLVSID----EEN 144 (346)
Q Consensus 73 ~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~----d~~ 144 (346)
.+|+|++++.....++.. .-.+|..+.. ....+.+... .+|...+..++|||||+.++++... +..
T Consensus 75 p~~dG~~~~~~~~~~~~~-~~~l~~~~~~-----~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~ 148 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKE-KAILYWRQGE-----SGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAV 148 (695)
T ss_dssp CEEETTEEEEEEECTTCS-SCEEEEEEST-----TSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCE
T ss_pred CEEECCEEEEEEEcCCCe-EEEEEEEcCC-----CCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEE
Confidence 358898888775433321 3445544310 1111222111 2355578999999999975555433 368
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCe-------------EEEEEccCCCcc--ceeec-
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS-------------VQFWDLRSMGKT--NSIEH- 208 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~i~d~~~~~~~--~~~~~- 208 (346)
|++||+.+++..... ..... ....++|+||++.|+.++.+.. |++|++.+++.. ..+..
T Consensus 149 i~v~dl~tg~~~~~~---~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~ 223 (695)
T 2bkl_A 149 LHVIDVDSGEWSKVD---VIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT 223 (695)
T ss_dssp EEEEETTTCCBCSSC---CBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC
T ss_pred EEEEECCCCCCcCCc---ccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC
Confidence 999999987643111 11110 1267899999999999987665 999999987632 22221
Q ss_pred c--c-eeEEEeCCCCCcEEEEecCC-C--eEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec---CCCeEEE
Q 019059 209 A--H-VRNVDYDTKKKHLLVTAADE-S--GIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG---TDSTVNL 279 (346)
Q Consensus 209 ~--~-v~~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~---~d~~i~i 279 (346)
. . +..+.|+|+|++++++...+ + .|+++|... . ....+..+...+....+ +++ .+++... .++.|.+
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~-~-~~~~l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE-K-DFRLLVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC-S-SCEEEEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC-C-ceEEeecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEE
Confidence 1 2 88999999998544444333 2 566665433 2 35555556666666666 777 5444444 2578999
Q ss_pred EecCCCCCCCCCcccccCCcccccccc--ccccc-cc-cceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 280 WLVSTSNHDELPSESLVESPNQRANSL--LNSYS-DY-EDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 280 wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~-~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
||+.. +.. ...+. .+ ...+.+++|+ ++ .++++...|+..+||.++
T Consensus 300 ~d~~~-------------------~~~~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 300 VDPAK-------------------PARASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EBTTB-------------------CSGGGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEE
T ss_pred EeCCC-------------------CCccCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEe
Confidence 99976 321 12222 22 4457888888 44 489999999998888653
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=1.5e-11 Score=101.56 Aligned_cols=237 Identities=6% Similarity=-0.043 Sum_probs=158.1
Q ss_pred cccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 143 (346)
....+.++++.+++...++. ..++.|.+|+... .... ..+..+...+.++++.+++. ++++...++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~----~~~~~v~~~~~~~--------~~~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~ 83 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQ----HKANKISSLDQSG--------RIKE-FEVPTPDAKVMCLIVSSLGD-IWFTENGAN 83 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEE----TTTTEEEEECTTS--------CEEE-EECSSTTCCEEEEEECTTSC-EEEEETTTT
T ss_pred CCCCcceeeECCCCCEEEEc----CCCCeEEEECCCC--------ceEE-EECCCCCCcceeEEECCCCC-EEEEecCCC
Confidence 34578899999988766553 4567899998641 1111 12223346789999999887 455544578
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccce-eec-cc-eeEEEeCCCC
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS-IEH-AH-VRNVDYDTKK 220 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~-~~-v~~~~~~~~~ 220 (346)
.|..+|.. ++. ...... .....+.++++.+++..+++...++.|..+|.. ++.... +.. .. +.++++++++
T Consensus 84 ~v~~~d~~-g~~-~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 84 KIGKLSKK-GGF-TEYPLP---QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN 157 (300)
T ss_dssp EEEEECTT-SCE-EEEECS---STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred eEEEECCC-CCe-EEecCC---CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC
Confidence 89999977 332 222211 112468899999988766666567899999987 543322 111 12 9999999999
Q ss_pred CcEEEEecCCCeEEEEEcccCCccee-eecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCc
Q 019059 221 KHLLVTAADESGIHLWDLRMLKAPIQ-ELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299 (346)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (346)
. ++++...++.|..+|.. ..... ....+...+..+++++++ .+.++....+.|.+||...
T Consensus 158 ~-l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~g--------------- 218 (300)
T 2qc5_A 158 A-LWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTTG--------------- 218 (300)
T ss_dssp S-EEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTTC---------------
T ss_pred C-EEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCCC---------------
Confidence 8 77777767899999983 32222 122344568899999998 7777776677899999842
Q ss_pred ccccccccc-ccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 300 NQRANSLLN-SYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 300 ~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+... .+..+...+.++++++++. ++++...++.|..|+.+
T Consensus 219 -----~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 219 -----EISEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITND 259 (300)
T ss_dssp -----CEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT
T ss_pred -----cEEEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECCC
Confidence 2211 1223345588999999986 77776667888888753
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.58 E-value=7.1e-13 Score=122.51 Aligned_cols=246 Identities=10% Similarity=0.084 Sum_probs=154.4
Q ss_pred cccceEEeeecCCCCceEEEEeecCC-cceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTGE-SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
|...+..++||||++.++.+...+|. ...|++||++ +++.+.. ..+......++|+ |++.++++...+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~---------tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVE---------SKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETT---------TCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECC---------CCCCCcc-ccCCceeccEEEe-CCCEEEEEEecC
Confidence 45578899999999998876644443 4789999998 4443322 1111123577899 999755554321
Q ss_pred ------------CeEEEEEcCCCCCCceeeecccCC-CceeeEEEEeCCCCCcEEEEec----CCeEEEEEccCCC-ccc
Q 019059 143 ------------ENIFLWSLDCSNKNAQVQSKQSSG-MLHYLSGGAWDPHDVNAVAATC----ESSVQFWDLRSMG-KTN 204 (346)
Q Consensus 143 ------------~~i~vwd~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~ 204 (346)
..|++|++.+........... .. +.....++.|+||+++|+.... +..|+++|+.++. ...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceE
Confidence 349999998765333333222 22 2334678899999998876543 3589999998764 334
Q ss_pred eeeccc--eeEEEeCCCCCcEEEEecCC---CeEEEEEcccCCc-ceeeecCCCcceEEEEeCCCCCcEEEEe-cCCC--
Q 019059 205 SIEHAH--VRNVDYDTKKKHLLVTAADE---SGIHLWDLRMLKA-PIQELPGHTHWTWAVCCNPEYDGFILSA-GTDS-- 275 (346)
Q Consensus 205 ~~~~~~--v~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~l~s~-~~d~-- 275 (346)
.+.... .... +++++..+++....+ +.|..+|+..... ..+.+..|...+. .|++++ ..|+.. ..++
T Consensus 275 ~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g-~~lv~~~~~~g~~ 350 (693)
T 3iuj_A 275 TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGS-GYLFAEYMVDATA 350 (693)
T ss_dssp EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEET-TEEEEEEEETTEE
T ss_pred EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEEC-CEEEEEEEECCee
Confidence 444222 3343 666666566666554 6799999886331 1355666666665 889998 555544 4455
Q ss_pred eEEEEecCCCCCCCCCcccccCCccccccccccccc-cccceeeEEEeCCCCCcEEEEeecC---CeEEEeeec
Q 019059 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-DYEDSVYGLAWSSREPWIFASLSYD---GRVRNHMLE 345 (346)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~d---~~v~vw~~~ 345 (346)
.|++||+.. .. ...+. .....+..+.++|+++.++++.+.. +.++.||++
T Consensus 351 ~l~~~d~~g-------------------~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 351 RVEQFDYEG-------------------KR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp EEEEECTTS-------------------CE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCC-------------------Ce-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 688888875 22 22222 2344577888898887555554421 678888864
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.57 E-value=2.8e-12 Score=104.39 Aligned_cols=234 Identities=12% Similarity=-0.037 Sum_probs=149.9
Q ss_pred eeccCCCCcceEEE-eecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEec
Q 019059 20 SDVKADTDHTSFLT-GTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQI 98 (346)
Q Consensus 20 ~~~~~~~~~~~~~~-g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~ 98 (346)
..+..++++. +.+ +. ..++.|..++... .... .....+...+.++++.+++. +.++. . ++.|.+|+.
T Consensus 27 ~~i~~~~~g~-l~v~~~---~~~~~i~~~~~~~--~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~---~-~~~i~~~d~ 94 (270)
T 1rwi_B 27 SGVAVDSAGN-VYVTSE---GMYGRVVKLATGS--TGTT-VLPFNGLYQPQGLAVDGAGT-VYVTD---F-NNRVVTLAA 94 (270)
T ss_dssp EEEEECTTCC-EEEEEC---SSSCEEEEECC-------E-ECCCCSCCSCCCEEECTTCC-EEEEE---T-TTEEEEECT
T ss_pred cceEECCCCC-EEEEcc---CCCCcEEEecCCC--cccc-eEeeCCcCCcceeEECCCCC-EEEEc---C-CCEEEEEeC
Confidence 3445556655 443 32 2346676664322 2111 11123335678999999887 44432 3 778999997
Q ss_pred CcccCCCCCccceeeeeee-ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeC
Q 019059 99 PELYGQLNSPQLERIAALD-AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWD 177 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 177 (346)
.. .....+. .....+.++++.+++. ++++...++.|.+|+..+... .... ......+.+++++
T Consensus 95 ~~----------~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~--~~~~---~~~~~~p~~i~~~ 158 (270)
T 1rwi_B 95 GS----------NNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ--TVLP---FTGLNDPDGVAVD 158 (270)
T ss_dssp TC----------SCCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC--EECC---CCSCCSCCCEEEC
T ss_pred CC----------ceEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee--Eeec---cccCCCceeEEEe
Confidence 61 1122222 2235688999999987 455555678999997654321 1111 1122357889999
Q ss_pred CCCCcEEEEecCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcce
Q 019059 178 PHDVNAVAATCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWT 255 (346)
Q Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 255 (346)
++++.+++...++.|.+||............. . +.++++++++. ++++...++.|.+||... .........+...+
T Consensus 159 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~p 236 (270)
T 1rwi_B 159 NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGS-TTSTVLPFTGLNTP 236 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTC-SCCEECCCCSCSCE
T ss_pred CCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCC-CcceeeccCCCCCc
Confidence 99985555556789999998876543322222 2 89999999996 888877788999999865 32222222233578
Q ss_pred EEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 256 WAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 256 ~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.+++++++| .++++...++.|+++++..
T Consensus 237 ~~i~~~~~g-~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 237 LAVAVDSDR-TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EEEEECTTC-CEEEEEGGGTEEEEECCCG
T ss_pred eeEEECCCC-CEEEEECCCCEEEEEcCCC
Confidence 999999999 8888888899999999986
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.57 E-value=1.9e-11 Score=104.10 Aligned_cols=274 Identities=9% Similarity=-0.093 Sum_probs=164.1
Q ss_pred CCcceEEEeec-ccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEe------ecCCcceEEEEec
Q 019059 26 TDHTSFLTGTL-SLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVF------STGESYGAAIWQI 98 (346)
Q Consensus 26 ~~~~~~~~g~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------~~~~d~~i~vw~~ 98 (346)
++..++.+... .......+.+++.... .+. ..+..-..+ .++++|++++++++.. .+..++.|.+||.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~--~~~-~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSG--SIL-GHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCC--eEE-EEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 45555555432 1111016677766543 232 222222222 8999999999988731 0123678999998
Q ss_pred CcccCCCCCccceeeeeeecc-------CCceEEEEeecCCCCcEEEEec-CCeEEEEEcCCCCCCceeeecccCCCcee
Q 019059 99 PELYGQLNSPQLERIAALDAH-------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 170 (346)
. +.+.+.++... ......+.|+|||++++++... ++.|.++| .+++....+.. ..
T Consensus 105 ~---------t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--~~----- 167 (373)
T 2mad_H 105 V---------TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--SP----- 167 (373)
T ss_pred C---------CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--CC-----
Confidence 7 55555554321 1234588999999975555533 58899999 87653322011 11
Q ss_pred eEEEEeCCCCCc-EEEEecCCeEEEEEccCCCccceee-----ccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccC
Q 019059 171 LSGGAWDPHDVN-AVAATCESSVQFWDLRSMGKTNSIE-----HAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (346)
Q Consensus 171 v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (346)
.++.+.|+++. +++.+.||.+.++|. +++...... .+. .....+.+++..++++. .++.+.+.|+...
T Consensus 168 -~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~ 244 (373)
T 2mad_H 168 -TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAA 244 (373)
T ss_pred -ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCC
Confidence 12344555543 455667999999999 776553221 111 23456666665344444 6789999998642
Q ss_pred Cc-ceeeecC----------CCcceEEEEeCCCCCcEEEEecC----------CCeEEEEecCCCCCCCCCcccccCCcc
Q 019059 242 KA-PIQELPG----------HTHWTWAVCCNPEYDGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 242 ~~-~~~~~~~----------~~~~v~~v~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
.. .+..+.. .......+.++|++ ..++.+.. .+.|.++|+.+
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~-~~lyV~~~~~~~~~~~~~~~~V~VID~~t---------------- 307 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS-DGIYLLTSEQSAWKLHAAAKEVTSVTGLV---------------- 307 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCC-CEEEEEeccCCcccccCCCCeEEEEECCC----------------
Confidence 21 1122211 11234447889998 55555432 35799999998
Q ss_pred ccccccccccccccceeeEEEeCCCCCcEEEEee-cCCeEEEeeec
Q 019059 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS-YDGRVRNHMLE 345 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~v~vw~~~ 345 (346)
.+.+..+... ....+++|+|+++.+++++. .++.|.++|++
T Consensus 308 ---~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 308 ---GQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred ---CEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 7777776432 24799999999974555555 58999999975
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=3.4e-12 Score=105.97 Aligned_cols=235 Identities=7% Similarity=-0.075 Sum_probs=147.5
Q ss_pred eeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe
Q 019059 61 LFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 61 ~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
+...........|+|+++.|+.+ +..++.|..|+.. ++ ...+..+...+..++++++|+ ++++..
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~---d~~~~~i~~~~~~----------g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~ 104 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWS---DLVGRRVLGWRED----------GT-VDVLLDATAFTNGNAVDAQQR-LVHCEH 104 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEE---ETTTTEEEEEETT----------SC-EEEEEESCSCEEEEEECTTSC-EEEEET
T ss_pred EecCCcCccCCeEeCCCCEEEEE---ECCCCEEEEEeCC----------CC-EEEEeCCCCccceeeECCCCC-EEEEEC
Confidence 34455567789999999866665 3567789999864 12 234445567789999999998 344444
Q ss_pred cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEE----Eec-------------CCeEEEEEccCCCcc
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA----ATC-------------ESSVQFWDLRSMGKT 203 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~ 203 (346)
.++.|.+|+.+ ++ ...+...........+..+++.|+|..+++ +.. .+.|..+|..+++..
T Consensus 105 ~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~ 182 (305)
T 3dr2_A 105 GRRAITRSDAD-GQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ 182 (305)
T ss_dssp TTTEEEEECTT-SC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE
T ss_pred CCCEEEEECCC-CC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE
Confidence 45789999975 33 222221111111234678999999987665 221 256888887766644
Q ss_pred ceeeccc-eeEEEeCCCCCcEEEEecCC------CeEEEEEcccCCc-ceeee-cCCCcceEEEEeCCCCCcEEEEecCC
Q 019059 204 NSIEHAH-VRNVDYDTKKKHLLVTAADE------SGIHLWDLRMLKA-PIQEL-PGHTHWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 204 ~~~~~~~-v~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~-~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d 274 (346)
... ... .+.++|+|++. .|+.+... +.|.+||+..... ....+ .........++++++| ++.+ ++.+
T Consensus 183 ~~~-~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G-~lwv-~~~~ 258 (305)
T 3dr2_A 183 RMA-DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGG-WLWS-SSGT 258 (305)
T ss_dssp EEE-EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTS-CEEE-CCSS
T ss_pred EEe-cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCC-CEEE-ecCC
Confidence 333 122 88999999998 45544443 7899999874220 01111 1123445678899999 6444 4444
Q ss_pred CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeE
Q 019059 275 STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRV 339 (346)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v 339 (346)
.|.+|+.. ++.+..+..+. .+.+++|+|+++ .|..++.++..
T Consensus 259 -gv~~~~~~--------------------g~~~~~~~~~~-~~~~~~f~~d~~-~L~it~~~~l~ 300 (305)
T 3dr2_A 259 -GVCVFDSD--------------------GQLLGHIPTPG-TASNCTFDQAQQ-RLFITGGPCLW 300 (305)
T ss_dssp -EEEEECTT--------------------SCEEEEEECSS-CCCEEEECTTSC-EEEEEETTEEE
T ss_pred -cEEEECCC--------------------CCEEEEEECCC-ceeEEEEeCCCC-EEEEEcCCeEE
Confidence 49999985 35555554444 488999999887 45555545433
No 205
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.53 E-value=1.5e-12 Score=109.20 Aligned_cols=212 Identities=8% Similarity=-0.015 Sum_probs=142.9
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeee------ccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALD------AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK 162 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~ 162 (346)
.++.|.++|.+ +.+....+. ........+.+. +..++++...++.|.+||..+++....+..
T Consensus 15 ~~~~l~~~d~~---------t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~- 82 (328)
T 3dsm_A 15 SNATLSYYDPA---------TCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITG- 82 (328)
T ss_dssp CCBEEEEEETT---------TTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-
T ss_pred CCceEEEEECC---------CCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCC-
Confidence 47899999987 444444331 112345677764 344566666689999999998765444421
Q ss_pred ccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-------ceeEEEeCCCCCcEEEEec-CCCeE
Q 019059 163 QSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-------HVRNVDYDTKKKHLLVTAA-DESGI 233 (346)
Q Consensus 163 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~~~~-~dg~i 233 (346)
......+++++++ .++++. .++.|.+||+.+++....+..+ .+..+++ .++. ++++.. .++.|
T Consensus 83 -----~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~-lyv~~~~~~~~v 154 (328)
T 3dsm_A 83 -----FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKY-VYVNCWSYQNRI 154 (328)
T ss_dssp -----CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTE-EEEEECTTCCEE
T ss_pred -----CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCE-EEEEcCCCCCEE
Confidence 1267889998888 555555 7899999999998866555422 2556777 3443 555554 48899
Q ss_pred EEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCC----------CeEEEEecCCCCCCCCCcccccCCccccc
Q 019059 234 HLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD----------STVNLWLVSTSNHDELPSESLVESPNQRA 303 (346)
Q Consensus 234 ~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 303 (346)
.++|+.+ .+.+..+.. ......+.++|+| ++++++..+ +.|.++|..+
T Consensus 155 ~viD~~t-~~~~~~i~~-g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t------------------- 212 (328)
T 3dsm_A 155 LKIDTET-DKVVDELTI-GIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAET------------------- 212 (328)
T ss_dssp EEEETTT-TEEEEEEEC-SSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTT-------------------
T ss_pred EEEECCC-CeEEEEEEc-CCCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCC-------------------
Confidence 9999987 445555553 3345788999999 777766654 7899999987
Q ss_pred cccccccccc-cceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 304 NSLLNSYSDY-EDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 304 ~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++....+... ...+..++|+|+++.+++ +.. .|.+||++
T Consensus 213 ~~v~~~~~~~~g~~p~~la~~~d~~~lyv-~~~--~v~~~d~~ 252 (328)
T 3dsm_A 213 FTVEKQFKFKLGDWPSEVQLNGTRDTLYW-INN--DIWRMPVE 252 (328)
T ss_dssp TEEEEEEECCTTCCCEEEEECTTSCEEEE-ESS--SEEEEETT
T ss_pred CeEEEEEecCCCCCceeEEEecCCCEEEE-Ecc--EEEEEECC
Confidence 5555444321 235789999999884444 332 78888864
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.53 E-value=6.7e-12 Score=105.76 Aligned_cols=278 Identities=10% Similarity=-0.014 Sum_probs=171.1
Q ss_pred cCCCCcceEEEeecc-cCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEe------ecCCcceEEE
Q 019059 23 KADTDHTSFLTGTLS-LKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVF------STGESYGAAI 95 (346)
Q Consensus 23 ~~~~~~~~~~~g~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~------~~~~d~~i~v 95 (346)
...|+..++.+.... ....+.+.+++.... .+. ..+..-..+ . ++++|++++++++.. .|..++.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~--~v~-~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAG--RVI-GMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTT--EEE-EEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCC--eEE-EEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 346788888887653 223467888766543 333 222222223 3 999999999887631 0123578999
Q ss_pred EecCcccCCCCCccceeeeeeeccC-------CceEEEEeecCCCCcEEEEe-cCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 96 WQIPELYGQLNSPQLERIAALDAHV-------GKINCVLWWSSGRHDKLVSI-DEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~~~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
||.. +.+.+.++.... .....+.++|||++++++.. .++.|.++|+.+.+....+... +
T Consensus 114 iD~~---------t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~---g- 180 (386)
T 3sjl_D 114 FDPV---------TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP---D- 180 (386)
T ss_dssp ECTT---------TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC---S-
T ss_pred EECC---------CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC---C-
Confidence 9998 667776664321 24567999999997555543 3789999999977644444221 1
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccC-CCccce----eecc--c-eeEEEeC-CCCCcEEEEecCCCeEEEEEc
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRS-MGKTNS----IEHA--H-VRNVDYD-TKKKHLLVTAADESGIHLWDL 238 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~----~~~~--~-v~~~~~~-~~~~~~l~~~~~dg~i~i~d~ 238 (346)
+ ...+....+.+++.+.||.+.+.++.+ ++.... +... . ....+|. ++|+ +++ .+.+|.|++.|+
T Consensus 181 ---~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~-vs~~g~V~v~d~ 254 (386)
T 3sjl_D 181 ---C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LVW-PTYTGKIHQIDL 254 (386)
T ss_dssp ---E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE-EEE-EBTTSEEEEEEC
T ss_pred ---c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc-EEE-EeCCCEEEEEEC
Confidence 1 112222334566777788888888875 443211 1111 1 2234553 6775 444 445799999998
Q ss_pred ccCCc-ceeeec---------C-CCcceEEEEeCCCCCcEEEEecC----------CCeEEEEecCCCCCCCCCcccccC
Q 019059 239 RMLKA-PIQELP---------G-HTHWTWAVCCNPEYDGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVE 297 (346)
Q Consensus 239 ~~~~~-~~~~~~---------~-~~~~v~~v~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~ 297 (346)
..... .+..+. + .......++++|++ ..++.... .+.|.+.|+.+
T Consensus 255 ~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~-~~lyV~~~~~~~~~hk~~~~~V~viD~~t------------- 320 (386)
T 3sjl_D 255 SSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL-DRIYLLVDQRDEWRHKTASRFVVVLDAKT------------- 320 (386)
T ss_dssp TTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT-TEEEEEEEECCTTCTTSCEEEEEEEETTT-------------
T ss_pred CCCcceeecceeccccccccccccCCCcceeeECCCC-CeEEEEeccccccccCCCCCEEEEEECCC-------------
Confidence 75321 122221 0 11233457788998 55555432 25799999998
Q ss_pred CccccccccccccccccceeeEEEeCCCCC-cEEEEeecCCeEEEeeec
Q 019059 298 SPNQRANSLLNSYSDYEDSVYGLAWSSREP-WIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d~~v~vw~~~ 345 (346)
.+.+..+..- ..+++++++|+++ .++++...++.|.++|..
T Consensus 321 ------~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 321 ------GERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp ------CCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred ------CeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 7777776543 3588999999996 445556679999999974
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=5.2e-12 Score=117.76 Aligned_cols=241 Identities=10% Similarity=0.030 Sum_probs=144.0
Q ss_pred ecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeee---e-eccCCceEEEEeecCCCCcEEEEecCC----e
Q 019059 73 SCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA---L-DAHVGKINCVLWWSSGRHDKLVSIDEE----N 144 (346)
Q Consensus 73 ~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~~~~~~~~~d~----~ 144 (346)
.+|+|++++.....++.. .-.+|..+.... .....+.+.. + ..|...+..++|||||++++++...+| .
T Consensus 114 p~pdG~~~~~~~~~~~~~-~~~l~~~~~~~~--~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~ 190 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMN-QSQLLVRPADAP--VGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRT 190 (741)
T ss_dssp CEEETTEEEEEEECSSCS-SCEEEEEETTSC--TTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEE
T ss_pred CEEECCEEEEEEEcCCCe-EEEEEEEcCCcc--CCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEE
Confidence 358999988876433322 345665541100 0011122111 1 223346889999999997555554433 5
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCe--------------EEEEEccCCCcc--ceee-
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESS--------------VQFWDLRSMGKT--NSIE- 207 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~i~d~~~~~~~--~~~~- 207 (346)
|++||+.+++....... ...+..++|+|| +.|+.+..+.. |++|++.++... ..+.
T Consensus 191 i~v~dl~tg~~~~~~~~------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 191 VKFVGVADGKPLADELK------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp EEEEETTTCCEEEEEEE------EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEECCCCCCCCccCC------CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 99999998764221111 112367899999 88888876543 899999877632 1222
Q ss_pred ccc---eeEEEeCCCCCcEEEEecC----CCeEEEEEcccCCcc-eeeecCCCcceEEEEeCCCCCcEEEEecC----CC
Q 019059 208 HAH---VRNVDYDTKKKHLLVTAAD----ESGIHLWDLRMLKAP-IQELPGHTHWTWAVCCNPEYDGFILSAGT----DS 275 (346)
Q Consensus 208 ~~~---v~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~-~~~~~~~~~~v~~v~~~~~~~~~l~s~~~----d~ 275 (346)
..+ +..+.|+|+|++++++... ...|++||+...... ...+..+...+.... +|+| ..|+..+. ++
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg-~~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVG-DQLWFVSGDGAPLK 341 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEET-TEEEEEECTTCTTC
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccC-CEEEEEECCCCCCC
Confidence 111 7899999999844444432 348999999863212 455655555555553 4888 66665554 34
Q ss_pred eEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 276 TVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 276 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
.|.+||+.... .+....+..+...+.+++|+ ++ .++++...|+..+||.+
T Consensus 342 ~l~~~d~~~~~-----------------~~~~~l~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 342 KIVRVDLSGST-----------------PRFDTVVPESKDNLESVGIA-GN-RLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEEEEECSSSS-----------------CEEEEEECCCSSEEEEEEEE-BT-EEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCc-----------------cccEEEecCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEE
Confidence 69999987610 01222233444557778887 34 58899999998888755
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=1.1e-11 Score=106.17 Aligned_cols=275 Identities=8% Similarity=-0.074 Sum_probs=167.1
Q ss_pred CCcceEEEeecccCCC-CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEee------cCCcceEEEEec
Q 019059 26 TDHTSFLTGTLSLKEE-NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQI 98 (346)
Q Consensus 26 ~~~~~~~~g~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~------~~~d~~i~vw~~ 98 (346)
++..++.+........ +.+.+++.... .+....-.+ ..+ .++++|+++.++++... |..++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~--~vv~~I~vG-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG--RILGMTDGG-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT--EEEEEEEEC-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC--EEEEEEECC-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 4566676665322111 67888876653 233222222 233 89999999999887421 124668999998
Q ss_pred CcccCCCCCccceeeeeeecc-------CCceEEEEeecCCCCcEEEEec-CCeEEEEEcCCCCCCceeeecccCCCcee
Q 019059 99 PELYGQLNSPQLERIAALDAH-------VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHY 170 (346)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 170 (346)
. +.+.+.++... ......+.++|||++++++... ++.|.+.|+.+.+....+....
T Consensus 157 ~---------t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------- 220 (426)
T 3c75_H 157 V---------TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------- 220 (426)
T ss_dssp T---------TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-------
T ss_pred C---------CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-------
Confidence 8 66666666421 1234678999999975555433 6899999999766443332211
Q ss_pred eEEEEeCCCC-CcEEEEecCCeEEEEEccCCCccc----eeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC
Q 019059 171 LSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK 242 (346)
Q Consensus 171 v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 242 (346)
. ....|++ ..+++.+.||.+.+.++.+++... .+..+. ...+.+.+++. .++.....+.+.+.|.....
T Consensus 221 ~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~-~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 221 C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG-RLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC-EEEEEBTTSEEEEEEECSSC
T ss_pred c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC-EEEEEeCCCcEEEEeccCCc
Confidence 1 1223333 344555677888777875554331 111111 23456788887 44444567899999986422
Q ss_pred c-ceeeecC----------CCcceEEEEeCCCCCcEEEEecC----------CCeEEEEecCCCCCCCCCcccccCCccc
Q 019059 243 A-PIQELPG----------HTHWTWAVCCNPEYDGFILSAGT----------DSTVNLWLVSTSNHDELPSESLVESPNQ 301 (346)
Q Consensus 243 ~-~~~~~~~----------~~~~v~~v~~~~~~~~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (346)
. .+..+.. .......++++|++ ..+++... ++.|.+.|+.+
T Consensus 298 ~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg-~rlyVa~~~~~~gthk~~s~~VsVID~~T----------------- 359 (426)
T 3c75_H 298 ATFRAPIEALTEAERADDWRPGGWQQTAYHRQS-DRIYLLVDQRDEWKHKAASRFVVVLNAET----------------- 359 (426)
T ss_dssp EEECCCEESSCTTTGGGTEEECSSSCEEEEGGG-TEEEEEEEECCTTCTTSCEEEEEEEETTT-----------------
T ss_pred eEEeeeeeeccccccccccccCCceeeEEcCCC-CEEEEEecccccccccCCCCEEEEEECCC-----------------
Confidence 1 0111110 01122236899998 55544421 35799999998
Q ss_pred cccccccccccccceeeEEEeCCCCC-cEEEEeecCCeEEEeeec
Q 019059 302 RANSLLNSYSDYEDSVYGLAWSSREP-WIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 302 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~d~~v~vw~~~ 345 (346)
.+.+..+.... ....+.|+|+++ .++++...++.|.++|+.
T Consensus 360 --~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 360 --GERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp --CCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred --CeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 77777775433 479999999997 455444469999999975
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.45 E-value=8.7e-12 Score=105.45 Aligned_cols=179 Identities=14% Similarity=0.103 Sum_probs=122.9
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCC--CCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCe
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQL--NSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 144 (346)
.++.+++++....++++ +.+ .+.+|++....... .....++.... .+.. |+.++| ++.. ++++ .++.
T Consensus 39 ~~nlLais~~~gll~a~----~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~-L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAA----SGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQ-VLVS-TRNA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEE----ETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTE-EEEE-ESSE
T ss_pred cccEEEEcCCCCEEEEe----CCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCE-EEEE-cCCc
Confidence 68999999988888775 344 66779987322000 00002222223 4556 999999 7774 4444 7899
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccceeEEEeCCCCCcEE
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLL 224 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l 224 (346)
|++||+.+......... +...+.++.+.+. .++++..||.|.+||+.++.... +. ..|++++|+|+| +
T Consensus 108 l~v~dv~sl~~~~~~~~-----~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~-~~Vs~v~WSpkG---~ 175 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTS-----FEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LA-QNVTSFDVTNSQ---L 175 (388)
T ss_dssp EEEEESSSTTCEEEEEE-----CSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EE-ESEEEEEECSSE---E
T ss_pred EEEEEchhhhccCccce-----eecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-cc-CCceEEEEcCCc---e
Confidence 99999986553322221 2335777777654 38888999999999999877543 21 229999999998 4
Q ss_pred EEecCCCeEEEEEcccCCcc--eeee------c---CCCcceEEEEeCCCCCcEEEE
Q 019059 225 VTAADESGIHLWDLRMLKAP--IQEL------P---GHTHWTWAVCCNPEYDGFILS 270 (346)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~--~~~~------~---~~~~~v~~v~~~~~~~~~l~s 270 (346)
+.|..||.+++|+... ... ..++ . +|...|.+|.|.+++ .++++
T Consensus 176 ~vg~~dg~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEE
T ss_pred EEEEcCCcEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEE
Confidence 6688899999998875 322 3344 2 377899999999998 77776
No 210
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=1.3e-10 Score=94.69 Aligned_cols=208 Identities=10% Similarity=0.022 Sum_probs=143.5
Q ss_pred CCCCeEEEEEecCCCCeEEEeeeeccc-cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee
Q 019059 39 KEENEVHLLRLSSGGTELICEGLFSHP-NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD 117 (346)
Q Consensus 39 ~~~~~i~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~ 117 (346)
..++.+++|+... ..+. ..+..+. ..+.++.++|+++.+++ .++.|..||.. ++.+-.+.
T Consensus 12 ~~~~~v~~~d~~t--G~~~-w~~~~~~~~~~~~~~~~pdG~ilvs------~~~~V~~~d~~----------G~~~W~~~ 72 (276)
T 3no2_A 12 SGWNKIAIINKDT--KEIV-WEYPLEKGWECNSVAATKAGEILFS------YSKGAKMITRD----------GRELWNIA 72 (276)
T ss_dssp TTCSEEEEEETTT--TEEE-EEEECCTTCCCCEEEECTTSCEEEE------CBSEEEEECTT----------SCEEEEEE
T ss_pred CCCCEEEEEECCC--CeEE-EEeCCCccCCCcCeEECCCCCEEEe------CCCCEEEECCC----------CCEEEEEc
Confidence 3568888886433 3333 3333343 47889999999986663 35678888863 56666666
Q ss_pred cc-CCceEEEEeecCCCCcEEEEec-CCeEEEEEcCCCCCCceeeeccc-CCCceeeEEEEeCCCCCcEEEEecCCeEEE
Q 019059 118 AH-VGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQS-SGMLHYLSGGAWDPHDVNAVAATCESSVQF 194 (346)
Q Consensus 118 ~~-~~~i~~~~~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 194 (346)
.+ ...+.++.+.++|+. +++.+. ++.|..+|. +++...+...... ..+......+++.+++.++++...++.|..
T Consensus 73 ~~~~~~~~~~~~~~dG~~-lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~ 150 (276)
T 3no2_A 73 APAGCEMQTARILPDGNA-LVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVRE 150 (276)
T ss_dssp CCTTCEEEEEEECTTSCE-EEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEE
T ss_pred CCCCccccccEECCCCCE-EEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEE
Confidence 54 357889999999993 555554 667777775 3443333322111 122234556678999999998888999999
Q ss_pred EEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC------cceEEEEeCCCCCcE
Q 019059 195 WDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT------HWTWAVCCNPEYDGF 267 (346)
Q Consensus 195 ~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~~v~~v~~~~~~~~~ 267 (346)
||.. ++.+..+.... +.++...+++. +++++..++.|..+|..+ ++.+.++..+. ..+..+...++| .+
T Consensus 151 ~d~~-G~~~w~~~~~~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~t-G~~~w~~~~~~~~~~~l~~~~~~~~~~~G-~i 226 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGTPFSSAFLDNGD-CLVACGDAHCFVQLNLES-NRIVRRVNANDIEGVQLFFVAQLFPLQNG-GL 226 (276)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEECTTSC-EEEECBTTSEEEEECTTT-CCEEEEEEGGGSBSCCCSEEEEEEECTTS-CE
T ss_pred ECCC-CCEEEEEECCCCccceeEcCCCC-EEEEeCCCCeEEEEeCcC-CcEEEEecCCCCCCccccccccceEcCCC-CE
Confidence 9998 88888877544 77788889998 888888888999999886 54666664322 237788888999 77
Q ss_pred EEEe
Q 019059 268 ILSA 271 (346)
Q Consensus 268 l~s~ 271 (346)
+++.
T Consensus 227 ~v~~ 230 (276)
T 3no2_A 227 YICN 230 (276)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7665
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.45 E-value=1.3e-12 Score=110.51 Aligned_cols=174 Identities=10% Similarity=0.036 Sum_probs=119.4
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCC-----ceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEE
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN-----AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 196 (346)
.++.+++++... ++++++.+ .+.+|++...... ..........+.. |+.++| ++..|+++ .++.|++||
T Consensus 39 ~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999888 35555544 6777987633200 0000000011334 999999 88888888 889999999
Q ss_pred ccCCCccceeeccc--eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCC
Q 019059 197 LRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 197 ~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d 274 (346)
+++.........-. +.++.+.+. -++++..||.+.+||+.... ... +...|++++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~-~~~----~~~~Vs~v~WSpkG---~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS-TKQ----LAQNVTSFDVTNSQ---LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC-EEE----EEESEEEEEECSSE---EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCc-ccc----ccCCceEEEEcCCc---eEEEEcC
Confidence 98776544333111 777766644 27778899999999998633 222 45689999999998 6778889
Q ss_pred CeEEEEecCCCCCCCCCcccccCCcccccccc--cccc------c---cccceeeEEEeCCCCCcEEEE
Q 019059 275 STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSY------S---DYEDSVYGLAWSSREPWIFAS 332 (346)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~~l~s 332 (346)
|.+++|+... .+. ..++ . +|...|.+|.|.+++. ++++
T Consensus 182 g~i~~~~~~~-------------------~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRN-------------------GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 230 (388)
T ss_dssp SCEEEEEEET-------------------TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred CcEEEEcCCC-------------------ccccccceecCCcccccccCCCeeEEEEEEecCCe-EEEE
Confidence 9999998876 222 2222 2 3667899999999886 5544
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=3.8e-11 Score=101.33 Aligned_cols=239 Identities=7% Similarity=-0.047 Sum_probs=143.9
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceee----eeeeccCCceEEEEeecCCCCcEEEEec
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI----AALDAHVGKINCVLWWSSGRHDKLVSID 141 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 141 (346)
..+..++++|+++.+++.. ...++.++||.+.. ....+. .....+-..+..++++++++ ++++...
T Consensus 17 ~~p~~va~~~~g~~~v~~~--~~~~~~~~l~~~~~-------g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLH--QFYQPEMQVAELTQ-------DGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEEC--GGGCCSCSEEEEET-------TEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECH
T ss_pred CCcceEEECCCCCEEEEeC--CCCCCceEEEEECC-------CCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCC
Confidence 5788999999987666642 11123366776641 011100 11123456789999999987 4554433
Q ss_pred -----CCeEEEEEcCCCCCCceeeecc-cCCCceeeEEEEeCCCCCcEEEE-e---cCCeEEEEEccCCCccceeec---
Q 019059 142 -----EENIFLWSLDCSNKNAQVQSKQ-SSGMLHYLSGGAWDPHDVNAVAA-T---CESSVQFWDLRSMGKTNSIEH--- 208 (346)
Q Consensus 142 -----d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~-~---~d~~i~i~d~~~~~~~~~~~~--- 208 (346)
+..|.+||+.+++....+.... ...+...+..+++++++..++.+ . .++.|.+||+.+++..+.+..
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 5799999998765333332211 11222356889999866555544 3 578999999987654332210
Q ss_pred ---------------------------cc-eeEEEeCCCCCcEEEEecCC-CeEEEEEcccCCc-------cee--eecC
Q 019059 209 ---------------------------AH-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLKA-------PIQ--ELPG 250 (346)
Q Consensus 209 ---------------------------~~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~-------~~~--~~~~ 250 (346)
.. +..|+|+|+++ .|+.+... ..+..++...... ... ...+
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 01 58899999998 45554444 4666665431110 000 1112
Q ss_pred CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccc-ccceeeEEEeCCCCCcE
Q 019059 251 HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-YEDSVYGLAWSSREPWI 329 (346)
Q Consensus 251 ~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~ 329 (346)
+......++++++| .++++...++.|.+||... ++....... +-..+.+++|.+++. +
T Consensus 246 ~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~-------------------G~~~~~~~~~~~~~p~~va~~~~g~-l 304 (343)
T 2qe8_A 246 EKPICDGISIDKDH-NIYVGDLAHSAIGVITSAD-------------------RAYKLLVTDEKLSWTDSFNFGSDGY-L 304 (343)
T ss_dssp ECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTT-------------------TEEEEEEECGGGSCEEEEEECTTSC-E
T ss_pred cCCCCceEEECCCC-CEEEEccCCCeEEEEECCC-------------------CCEEEEEECCceecCCeeEECCCCc-E
Confidence 33456779999999 8899988899999999843 332211111 234588999999986 6
Q ss_pred EEEeecC
Q 019059 330 FASLSYD 336 (346)
Q Consensus 330 l~s~~~d 336 (346)
+++.+..
T Consensus 305 ~v~~~~~ 311 (343)
T 2qe8_A 305 YFDCNQL 311 (343)
T ss_dssp EEEECCG
T ss_pred EEEeCcc
Confidence 6666533
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.40 E-value=2e-10 Score=94.86 Aligned_cols=203 Identities=9% Similarity=0.022 Sum_probs=129.6
Q ss_pred cCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEcc
Q 019059 119 HVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR 198 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (346)
+..-..+..|++++..++++...++.|..||..++.. . ... ....+.+++++++++ ++++. +..|.+||..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~-~~~-----~~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-Q-RVT-----MDAPVSSVALRQSGG-YVATI-GTKFCALNWK 81 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-E-EEE-----CSSCEEEEEEBTTSS-EEEEE-TTEEEEEETT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-E-EEe-----CCCceEEEEECCCCC-EEEEE-CCeEEEEECC
Confidence 3345568899997776666666689999999986542 1 111 123688999999998 44444 5689999998
Q ss_pred CCCccceeec-----cc-eeEEEeCCCCCcEEEEecC---------CCeEEEEEcccCCcceeeecCCCcceEEEEeCCC
Q 019059 199 SMGKTNSIEH-----AH-VRNVDYDTKKKHLLVTAAD---------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPE 263 (346)
Q Consensus 199 ~~~~~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~ 263 (346)
+++....... .. ++.++++|+|. ++++... ...-.+|.+..... +..+..+....+.++|+|+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCC
Confidence 7764322221 12 88999999998 6554422 12334555443232 3333333455688999999
Q ss_pred CCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 264 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
+..++++.+.++.|.+||+....... ...+....+..+...+..++++++|. +.++...++.|.+|+
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~------------~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQI------------SNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLD 226 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCE------------EEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEEC
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcc------------cCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEc
Confidence 93344666778899999974200000 00122233333445678999999996 777877788899998
Q ss_pred ec
Q 019059 344 LE 345 (346)
Q Consensus 344 ~~ 345 (346)
.+
T Consensus 227 ~~ 228 (297)
T 3g4e_A 227 PV 228 (297)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.40 E-value=4.3e-11 Score=100.92 Aligned_cols=218 Identities=8% Similarity=-0.150 Sum_probs=136.7
Q ss_pred eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe---------cCCeEEEEEcCCCCCCceeeec
Q 019059 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI---------DEENIFLWSLDCSNKNAQVQSK 162 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~d~~i~vwd~~~~~~~~~~~~~ 162 (346)
.|.+.|.. +.+.+.++.....+ .+.++||++.++++.. .++.|.+||+.+.+....+...
T Consensus 47 ~vsvID~~---------t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 47 ENWVSCAG---------CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEEEETT---------TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred eEEEEECC---------CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 88899988 78888888766666 7999999998666653 3688999999988766555432
Q ss_pred ccCC--CceeeEEEEeCCCCCcEEEEec--CCeEEE--EEccCCCccceeeccc---------eeEEEeCCCCCc-----
Q 019059 163 QSSG--MLHYLSGGAWDPHDVNAVAATC--ESSVQF--WDLRSMGKTNSIEHAH---------VRNVDYDTKKKH----- 222 (346)
Q Consensus 163 ~~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~---------v~~~~~~~~~~~----- 222 (346)
.... .......++++||+++++++.. +..+.+ +|+.+ +..+..+. -.-+++++++..
T Consensus 116 ~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~ 192 (368)
T 1mda_H 116 DAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDL 192 (368)
T ss_dssp TSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEEC
T ss_pred CccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEEC
Confidence 1000 0014568899999999998874 467888 99866 22221100 001222222220
Q ss_pred -------------------------------EEEEecCCCeEEEEEcccCC-cceeeecC-------C---CcceEEEEe
Q 019059 223 -------------------------------LLVTAADESGIHLWDLRMLK-APIQELPG-------H---THWTWAVCC 260 (346)
Q Consensus 223 -------------------------------~l~~~~~dg~i~i~d~~~~~-~~~~~~~~-------~---~~~v~~v~~ 260 (346)
.++..+. +.+.+.|..... ..+..+.. + ......+.+
T Consensus 193 ~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 193 AAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred ccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 1122222 556666654311 11111110 0 011122679
Q ss_pred CCCCCcEEEEe-c---C-----CCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEE
Q 019059 261 NPEYDGFILSA-G---T-----DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFA 331 (346)
Q Consensus 261 ~~~~~~~l~s~-~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 331 (346)
+|++ ..++.+ . . ++.+.++|+.+ .+.+..+.... ....++|+|+++++++
T Consensus 272 s~dg-~~lyV~~~~~~~~~~~~~~~~~ViD~~t-------------------~~vv~~i~vg~-~p~gi~~s~Dg~~l~v 330 (368)
T 1mda_H 272 LKNT-DGIMILTVEHSRSCLAAAENTSSVTASV-------------------GQTSGPISNGH-DSDAIIAAQDGASDNY 330 (368)
T ss_dssp ETTT-TEEEEEEEECSSCTTSCEEEEEEEESSS-------------------CCEEECCEEEE-EECEEEECCSSSCEEE
T ss_pred cCCC-CEEEEEeccccCcccccCCCEEEEECCC-------------------CeEEEEEECCC-CcceEEECCCCCEEEE
Confidence 9999 555543 3 2 23566999998 77777776544 4899999999986788
Q ss_pred Eee-cCCeEEEeeec
Q 019059 332 SLS-YDGRVRNHMLE 345 (346)
Q Consensus 332 s~~-~d~~v~vw~~~ 345 (346)
+.. .++.|.++|+.
T Consensus 331 a~~~~~~~VsVID~~ 345 (368)
T 1mda_H 331 ANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEETTTTEEEEEESS
T ss_pred EccCCCCeEEEEECC
Confidence 888 69999999975
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.37 E-value=6.1e-11 Score=109.60 Aligned_cols=198 Identities=15% Similarity=0.146 Sum_probs=129.9
Q ss_pred cCCceEEEEeecCCCCcEEEEecC----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC----
Q 019059 119 HVGKINCVLWWSSGRHDKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES---- 190 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 190 (346)
|...+..++|||||++++++.... ..|++||+.+++........ .....++|+ |++.|+.+..+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~------~k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD------VKFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE------EESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC------ceeccEEEe-CCCEEEEEEecCcccc
Confidence 455788999999999755555332 57999999987632221110 013578999 999999888763
Q ss_pred ---------eEEEEEccCCCcc--ceee-cc-c---eeEEEeCCCCCcEEEEecC---CCeEEEEEcccCCcceeeecCC
Q 019059 191 ---------SVQFWDLRSMGKT--NSIE-HA-H---VRNVDYDTKKKHLLVTAAD---ESGIHLWDLRMLKAPIQELPGH 251 (346)
Q Consensus 191 ---------~i~i~d~~~~~~~--~~~~-~~-~---v~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~ 251 (346)
.|++|++.++... ..+. .. + ..++.|+|++++++++... ...|+++|+.........+..+
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 4999999876532 1111 22 2 6789999999965555442 3589999998644356666666
Q ss_pred CcceEEEEeCCCCCcEEEEecCC---CeEEEEecCCCCCCCCCcccccCCcccccccc--ccccccccceeeEEEeCCCC
Q 019059 252 THWTWAVCCNPEYDGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWSSRE 326 (346)
Q Consensus 252 ~~~v~~v~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 326 (346)
....... |++++..+++....+ +.|..+|+.. +.. ...+..|...+. .|++++
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~-------------------~~~~~~~~l~~~~~~~~--~~s~~g 337 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN-------------------PGPAHWRDLIPERQQVL--TVHSGS 337 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS-------------------CCGGGCEEEECCCSSCE--EEEEET
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC-------------------CCccccEEEecCCCCEE--EEEEEC
Confidence 6666555 666763555555544 5788999886 222 233444554454 888888
Q ss_pred CcEEEEeecCC--eEEEeeec
Q 019059 327 PWIFASLSYDG--RVRNHMLE 345 (346)
Q Consensus 327 ~~~l~s~~~d~--~v~vw~~~ 345 (346)
+.++++...++ .|++|+++
T Consensus 338 ~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 338 GYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp TEEEEEEEETTEEEEEEECTT
T ss_pred CEEEEEEEECCeeEEEEEECC
Confidence 75555555665 57787764
No 216
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.37 E-value=1.7e-09 Score=91.90 Aligned_cols=196 Identities=12% Similarity=0.093 Sum_probs=126.8
Q ss_pred CCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee-------ccCCceEEEEeecCCCCcEEEEecC-----
Q 019059 75 PFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD-------AHVGKINCVLWWSSGRHDKLVSIDE----- 142 (346)
Q Consensus 75 ~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~~~~~d----- 142 (346)
+++++|++. +..+..|.|+|+..... ..+..+++. .....-..+...|+| +++++..+
T Consensus 93 ~~r~~l~v~---~l~s~~I~viD~~t~p~-----~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVP---GLRSSRIYIIDTKPNPR-----EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEE---BTTTCCEEEEECCSCTT-----SCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCS
T ss_pred ccCCEEEEc---cCCCCeEEEEECCCCCC-----CceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCC
Confidence 788888887 57778999999862111 124444442 111244567788998 56666434
Q ss_pred -CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-------------------cCCeEEEEEccCCCc
Q 019059 143 -ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-------------------CESSVQFWDLRSMGK 202 (346)
Q Consensus 143 -~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~ 202 (346)
+.|.++|..+.+......... +....-+.+.|+|+++.++++. .+.+|.+||+.+++.
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~--~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDR--GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBC--TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred CCeEEEEECCCCeEEEEEccCC--CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 789999998766444333221 1112345688899999777774 368999999999877
Q ss_pred cceeecc---c-eeEEEe--CCCCCcEEEEec-----CCCeEEEEEcccCCc--ceee--ecC----------------C
Q 019059 203 TNSIEHA---H-VRNVDY--DTKKKHLLVTAA-----DESGIHLWDLRMLKA--PIQE--LPG----------------H 251 (346)
Q Consensus 203 ~~~~~~~---~-v~~~~~--~~~~~~~l~~~~-----~dg~i~i~d~~~~~~--~~~~--~~~----------------~ 251 (346)
..++..+ . ...+.| +|++++.+++.- .+++|.+|.... +. ..+. +.. -
T Consensus 241 ~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~ 319 (462)
T 2ece_A 241 IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAV 319 (462)
T ss_dssp EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEE
T ss_pred eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccC
Confidence 7777754 2 566655 999996566555 677887766543 21 0010 000 0
Q ss_pred CcceEEEEeCCCCCcEEEEecC-CCeEEEEecCC
Q 019059 252 THWTWAVCCNPEYDGFILSAGT-DSTVNLWLVST 284 (346)
Q Consensus 252 ~~~v~~v~~~~~~~~~l~s~~~-d~~i~iwd~~~ 284 (346)
......|.++|+| ++|+++.. .+.|.+||+..
T Consensus 320 ~~~pa~I~lS~DG-rfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 320 PPLVTDIDISLDD-KFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCCCCCEEECTTS-CEEEEEETTTTEEEEEECSS
T ss_pred CCceeEEEECCCC-CEEEEEeCCCCEEEEEEecC
Confidence 2346789999999 66665554 78999999864
No 217
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.36 E-value=1.9e-10 Score=95.64 Aligned_cols=204 Identities=7% Similarity=0.057 Sum_probs=128.9
Q ss_pred cCCceEEEEeecCCCCcEEE-------EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCC-CCcEEEEecCC
Q 019059 119 HVGKINCVLWWSSGRHDKLV-------SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPH-DVNAVAATCES 190 (346)
Q Consensus 119 ~~~~i~~~~~~~~~~~~~~~-------~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~ 190 (346)
.-....+++|++++. ++++ ...++.|.+||..+++. ..+......++...+.+++++++ +. ++++....
T Consensus 16 ~~~~~~~~~~~~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~ 92 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKK-TVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRL 92 (314)
T ss_dssp CCTTCEEEEECTTSC-EEEEETTCEETTEECCEEEEECTTTCCE-EEEECCEETTEECCEEEEEECSSSSE-EEEEETTT
T ss_pred cCCCccCceECCCCC-EEEEEeccccCCCCCCEEEEEeCCCCcE-EEEEecccCCCCCCCceEEEecCCCc-EEEEECCC
Confidence 334568899998886 4555 35688999999876542 22211111122346889999998 55 55555455
Q ss_pred eEEEEEccCCCccce-ee--c---cc-eeEEEeCCCCCcEEEEecCC---------------CeEEEEEcccCCcceeee
Q 019059 191 SVQFWDLRSMGKTNS-IE--H---AH-VRNVDYDTKKKHLLVTAADE---------------SGIHLWDLRMLKAPIQEL 248 (346)
Q Consensus 191 ~i~i~d~~~~~~~~~-~~--~---~~-v~~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~ 248 (346)
.|.+||.. ++.... .. . .. +.++++++++. ++++...+ +.|..+|.. .. ...+
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQ-MIQV 167 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SC-EEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC--CC-EEEe
Confidence 79999988 654322 11 0 12 88999999997 66665544 466667654 32 2333
Q ss_pred cCCCcceEEEEeC----CCCCcEE-EEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccccc-ceeeEEEe
Q 019059 249 PGHTHWTWAVCCN----PEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-DSVYGLAW 322 (346)
Q Consensus 249 ~~~~~~v~~v~~~----~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~ 322 (346)
..+......++|+ |++ ..| ++...++.|.+||.... .. .........+..+. ..+..+++
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~-g~------------~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGP-AK------------IENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp EEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEET-TE------------EEEEEEEEECCCCSSCEEEEEEE
T ss_pred ccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCC-Cc------------cccceEEEECCCCCCCCCCceEE
Confidence 3333456889999 998 555 44456789999997620 00 00011223334443 55788999
Q ss_pred CCCCCcEEEEeecCCeEEEeeec
Q 019059 323 SSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 323 ~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+++|. ++++...++.|.+|+.+
T Consensus 234 d~~G~-l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 234 DEDNN-LLVANWGSSHIEVFGPD 255 (314)
T ss_dssp BTTCC-EEEEEETTTEEEEECTT
T ss_pred CCCCC-EEEEEcCCCEEEEEcCC
Confidence 99996 77777778899999875
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=3.4e-09 Score=90.21 Aligned_cols=243 Identities=9% Similarity=0.018 Sum_probs=148.8
Q ss_pred eccCCCCcceEEEeeccc------CCCCeEEEEEecCCCCeEEEeeee--c---cccceEEeeecCCCCceEEEEeecCC
Q 019059 21 DVKADTDHTSFLTGTLSL------KEENEVHLLRLSSGGTELICEGLF--S---HPNEIWDLSSCPFDQRIFSTVFSTGE 89 (346)
Q Consensus 21 ~~~~~~~~~~~~~g~~~~------~~~~~i~~~~~~~~~~~~~~~~~~--~---h~~~v~~~~~~~~~~~l~~~~~~~~~ 89 (346)
.+.+++++.++.+..... ..++.+.+++....+. +....+. . +......++|+|++++|+++. ...
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~-~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n--~~~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP-IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ--FAA 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE-EEEEECCCccccccCCCccceEECCCCCEEEEEe--cCC
Confidence 456777887777764311 1246677777654221 1111111 0 012345789999999999873 112
Q ss_pred cceEEEEecCcccCCCCCccceeeee-eeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeee-cccCCC
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAA-LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQS-KQSSGM 167 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~ 167 (346)
+..|.++| . ..+.+.. +... . ++.+.|+++..+++.+.||.+.++|. +++....... ....+.
T Consensus 147 ~~~v~viD-~---------t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~ 211 (373)
T 2mad_H 147 GPAVGLVV-Q---------GGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAA 211 (373)
T ss_pred CCeEEEEE-C---------CCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCC
Confidence 56899999 8 5666666 5322 1 35567787766666678999999999 6543322110 000111
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCc--cceeec-----------cc-eeEEEeCCCCCcEEEEec-----
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK--TNSIEH-----------AH-VRNVDYDTKKKHLLVTAA----- 228 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~-----------~~-v~~~~~~~~~~~~l~~~~----- 228 (346)
..-.....+.+++..++..+..+.+.+.|+..... ...+.. +. ...++++|++..++++..
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~ 291 (373)
T 2mad_H 212 QNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAW 291 (373)
T ss_pred cceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcc
Confidence 11122345666666666666788999999975532 111110 11 444889999884444432
Q ss_pred ----CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCc-EEEEec-CCCeEEEEecCC
Q 019059 229 ----DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDG-FILSAG-TDSTVNLWLVST 284 (346)
Q Consensus 229 ----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~l~s~~-~d~~i~iwd~~~ 284 (346)
..+.|.++|+.+ .+.+..+.. ......+.|+|+| + +++++. .++.|.++|+.+
T Consensus 292 ~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg-~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 292 KLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDG-GPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred cccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCC-CeEEEEEcCCCCeEEEEECCC
Confidence 135799999987 556666653 4468999999999 6 777777 589999999998
No 219
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.34 E-value=9.8e-11 Score=102.89 Aligned_cols=189 Identities=16% Similarity=0.016 Sum_probs=135.4
Q ss_pred CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec-cCCceEEEEe-e-cCCCCcEEEE-------------
Q 019059 76 FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLW-W-SSGRHDKLVS------------- 139 (346)
Q Consensus 76 ~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~-~~~~~~~~~~------------- 139 (346)
||++++++ ...+..|.+.|++ ..+....+.- .......+++ + |++.++++++
T Consensus 100 DG~~lfVn---d~~~~rVavIdl~---------t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 100 DGRFLFMN---DKANTRVARVRCD---------VMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp EEEEEEEE---ETTTTEEEEEETT---------TTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred CCCEEEEE---cCCCCEEEEEECC---------CceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 78888886 3566789999998 6666664432 2345788887 4 8999755543
Q ss_pred ----ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC-------------------------
Q 019059 140 ----IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES------------------------- 190 (346)
Q Consensus 140 ----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------- 190 (346)
-.++.+.+.|.++.+...++.... ....++++|+++++++++.+.
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~ 241 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI 241 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce
Confidence 224688999998655444443322 345678899999988888442
Q ss_pred -------------eEEEEEccC--CCc-cceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC-----------
Q 019059 191 -------------SVQFWDLRS--MGK-TNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK----------- 242 (346)
Q Consensus 191 -------------~i~i~d~~~--~~~-~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------- 242 (346)
.|.+.|.++ ++. +..+..+. ..++.++|||+++++++..+.+|.++|+.+..
T Consensus 242 ~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 242 EKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS 321 (595)
T ss_dssp HHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGG
T ss_pred eEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCccc
Confidence 377888887 544 45565555 89999999999888888888999999998531
Q ss_pred cceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 243 APIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 243 ~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
..+.... -......++|+|+| ....+.-.|++|.+||+..
T Consensus 322 ~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 322 AVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred ceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 1122222 33567889999999 8778888899999999875
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=4.1e-09 Score=90.92 Aligned_cols=206 Identities=10% Similarity=-0.010 Sum_probs=128.8
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC--eEEEEEcc
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES--SVQFWDLR 198 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~ 198 (346)
.....++|+++++ ++++...++.|++||..++.. ..+.... .... ++|+|+++.++++..++ .|.++|..
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~-~~~~~~~-----~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKV-TTVHPGF-----KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEE-EEEEETC-----CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEE-EEeeccC-----CCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 3578999999988 455556678999999976432 2222211 1233 89999999888888755 89999988
Q ss_pred CCCcccee----e-ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee-----cCCCcce--EEEEeCCCCC
Q 019059 199 SMGKTNSI----E-HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-----PGHTHWT--WAVCCNPEYD 265 (346)
Q Consensus 199 ~~~~~~~~----~-~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v--~~v~~~~~~~ 265 (346)
.+.....+ . ... +.+++++|++..+++ +..++.|+.||..... ...+ .++...- ..++|+|++.
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCC
Confidence 76553333 1 122 889999995443554 6668899999987532 2222 1222222 3899999542
Q ss_pred cEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEee-cCCeEEEeee
Q 019059 266 GFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLS-YDGRVRNHML 344 (346)
Q Consensus 266 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d~~v~vw~~ 344 (346)
.++++-..++.|+.|+...... ...... ...-...+. . ....-.....++++|+|. ++++-. .+++|+.|++
T Consensus 280 ~lyv~d~~~~~I~~~~~~g~~~--~~~g~~-~~~g~~dg~--~-~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 280 NFYMSDQNLSSVYKITPDGECE--WFCGSA-TQKTVQDGL--R-EEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp EEEEEETTTTEEEEECTTCCEE--EEEECT-TCCSCBCEE--G-GGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEET
T ss_pred EEEEEeCCCCEEEEEecCCCEE--EEEeCC-CCCCcCCCc--c-cccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEEC
Confidence 7777777788999998764100 000000 000000000 0 000112478999999997 888887 8899999984
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=9.7e-10 Score=91.98 Aligned_cols=193 Identities=10% Similarity=-0.002 Sum_probs=122.7
Q ss_pred eEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCc
Q 019059 123 INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGK 202 (346)
Q Consensus 123 i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (346)
..+..|+|++..++++...++.|..||..++.. ... . . ...+.+++|+|+++.+++. . ..|.+||..+++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~--~---~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TVH-A--L---PFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE-E--C---SSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE-E--C---CCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE
Confidence 457789998776666666688999999876432 111 1 1 1268889999998866654 3 4599999987764
Q ss_pred cceeec-----cc-eeEEEeCCCCCcEEEEecC------CCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEE-E
Q 019059 203 TNSIEH-----AH-VRNVDYDTKKKHLLVTAAD------ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI-L 269 (346)
Q Consensus 203 ~~~~~~-----~~-v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l-~ 269 (346)
...... .. +++++++|+|. ++++... .+.|..++ . .. +..+..+......++|+|++ +.| +
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~-~~~~~~~~~~~~~i~~s~dg-~~lyv 195 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GK-VTKLFADISIPNSICFSPDG-TTGYF 195 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TE-EEEEEEEESSEEEEEECTTS-CEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-Cc-EEEeeCCCcccCCeEEcCCC-CEEEE
Confidence 322211 12 89999999998 5554432 24455555 2 32 33333333456789999999 655 5
Q ss_pred EecCCCeEEEEecC--CC-CCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 270 SAGTDSTVNLWLVS--TS-NHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 270 s~~~d~~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.+.++.|.+||+. .+ ... ..+.+..+......+..+.++++|. +.++...++.|.+|+.+
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~--------------~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTG--------------KAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSS--------------CCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTT
T ss_pred EECCCCEEEEEEcccccCCccc--------------CceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCC
Confidence 55667899999986 30 000 0011222222334567899999996 77666667889988864
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.32 E-value=7.1e-10 Score=93.46 Aligned_cols=199 Identities=8% Similarity=-0.012 Sum_probs=128.8
Q ss_pred eeecCCCCceEEEEee-cCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe---------
Q 019059 71 LSSCPFDQRIFSTVFS-TGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI--------- 140 (346)
Q Consensus 71 ~~~~~~~~~l~~~~~~-~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------- 140 (346)
....|++..++++... ...++.|.+.|.. +.+.+.++.....+ . +.++|||++++++..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~---------t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGE---------AGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETT---------TTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECC---------CCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCC
Confidence 4557888888876411 0115799999988 77888888765555 4 999999998666652
Q ss_pred cCCeEEEEEcCCCCCCceeeecc--cCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEccCCCccceeeccceeEEEe
Q 019059 141 DEENIFLWSLDCSNKNAQVQSKQ--SSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEHAHVRNVDY 216 (346)
Q Consensus 141 ~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~v~~~~~ 216 (346)
.++.|.+||..+.+....+.... ....-.....++++|||++++++.. ++.|.++|+.+++.+.++..+.+ ...+
T Consensus 107 ~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~ 185 (386)
T 3sjl_D 107 RTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIF 185 (386)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEE
T ss_pred CCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceee
Confidence 35789999999876555443321 0000114567899999999998864 68999999999998888764322 1122
Q ss_pred CCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC----CcceE-EEEe-CCCCCcEEEEecCCCeEEEEecCC
Q 019059 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH----THWTW-AVCC-NPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~v~-~v~~-~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
|.+...+++.+.||.+.+.++....+.......+ ..++. ...| .++| ++++ .+.+|.|.+.|+..
T Consensus 186 -P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 186 -PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSS 256 (386)
T ss_dssp -EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTT
T ss_pred -cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCC
Confidence 4333356677778888777776523222211111 12221 2355 3677 5555 45579999999976
No 223
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.26 E-value=1.4e-08 Score=82.25 Aligned_cols=221 Identities=11% Similarity=0.076 Sum_probs=141.3
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENI 145 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i 145 (346)
..+.+++|.|+++.|..+ ....+.|.+++++ .......+.........+++.+++..++++....+.|
T Consensus 36 ~~~~gi~~d~~~~~ly~~---d~~~~~I~~~~~~---------g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWT---DISEPSIGRASLH---------GGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEEEEETTTTEEEEE---ETTTTEEEEEESS---------SCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CcEEEEEEecCCCEEEEE---ECCCCEEEEEecC---------CCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEE
Confidence 457899999988888776 3456789999986 2222222222224678999999877655555667899
Q ss_pred EEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec---CCeEEEEEccCCCccceeecc--c-eeEEEeCCC
Q 019059 146 FLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC---ESSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTK 219 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~--~-v~~~~~~~~ 219 (346)
.+++++... ...+.... ......++++|++..++.+.. .+.|..+++.... ...+... . ...++++++
T Consensus 104 ~~~~~~g~~-~~~~~~~~----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 104 EVAKMDGTQ-RRVLFDTG----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAF 177 (267)
T ss_dssp EEEETTSCS-CEEEECSS----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETT
T ss_pred EEEEcCCCC-EEEEEECC----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCC
Confidence 999987432 22222111 125688999997777766654 3688888876433 2222211 2 899999998
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCc
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESP 299 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (346)
+..++++-...+.|.++|+.. ......+.. ......++.. .+ .++++....+.|.++|..+
T Consensus 178 ~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~-~~~P~gi~~d-~~-~lyva~~~~~~v~~~d~~~--------------- 238 (267)
T 1npe_A 178 SSQLCWVDAGTHRAECLNPAQ-PGRRKVLEG-LQYPFAVTSY-GK-NLYYTDWKTNSVIAMDLAI--------------- 238 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTE-EEEEEEEEC-CCSEEEEEEE-TT-EEEEEETTTTEEEEEETTT---------------
T ss_pred CCEEEEEECCCCEEEEEecCC-CceEEEecC-CCCceEEEEe-CC-EEEEEECCCCeEEEEeCCC---------------
Confidence 775777777778999999874 222222222 2334566654 33 5555555678999999987
Q ss_pred ccccccccccccccc-ceeeEEEeCCCCC
Q 019059 300 NQRANSLLNSYSDYE-DSVYGLAWSSREP 327 (346)
Q Consensus 300 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 327 (346)
++.+..+.... .....+++.|++.
T Consensus 239 ----g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 239 ----SKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp ----TEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ----CCceEEEccccccccceeeecCccC
Confidence 66666654332 2367788887753
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=1.2e-09 Score=93.74 Aligned_cols=192 Identities=8% Similarity=-0.029 Sum_probs=126.4
Q ss_pred CCCCceEEEEeecCCc----ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe---------c
Q 019059 75 PFDQRIFSTVFSTGES----YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI---------D 141 (346)
Q Consensus 75 ~~~~~l~~~~~~~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~ 141 (346)
|+++.++++. ..+ +.|.+.|.. +.+.+.++.....+ .+.++||++.++++.. .
T Consensus 82 ~~~~~vyV~n---~~~~~~~~~VsVID~~---------t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 82 PDARRVYIQD---PAHFAAITQQFVIDGS---------TGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCTTEEEEEE---CTTTCSSEEEEEEETT---------TTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCEEEEEC---CCcCCCCCeEEEEECC---------CCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCC
Confidence 4566666653 222 799999998 77888888766666 8999999998666653 3
Q ss_pred CCeEEEEEcCCCCCCceeeecccCC--CceeeEEEEeCCCCCcEEEEec--CCeEEEEEccCCCccceeeccceeEEEeC
Q 019059 142 EENIFLWSLDCSNKNAQVQSKQSSG--MLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEHAHVRNVDYD 217 (346)
Q Consensus 142 d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~v~~~~~~ 217 (346)
++.|.++|..+.+....+....... .......+.++||+++++++.. ++.|.+.|+.+++.+..+..+.. ....
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~ 225 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIF 225 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeec
Confidence 6789999999876555444320000 0123567899999999999874 57899999999998877764332 2233
Q ss_pred CCCCcEEEEecCCCeEEEEEcccCCccee----eecCCCcce-EEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 218 TKKKHLLVTAADESGIHLWDLRMLKAPIQ----ELPGHTHWT-WAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~v-~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
|++...+++.+.||.+.+.+... .+... .+.....++ ..+.+.+++ ..++..+..+.|.+.|+..
T Consensus 226 p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~ 295 (426)
T 3c75_H 226 PASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTA 295 (426)
T ss_dssp EEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECS
T ss_pred cCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccC
Confidence 44433566666777777777733 32221 111111221 235678888 5555556678999999865
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=8.9e-10 Score=92.91 Aligned_cols=208 Identities=11% Similarity=0.030 Sum_probs=127.9
Q ss_pred CceEEEEeecCCCCcEEEEe--cCCeEEEEEcCCCCCCceeee--cccCCCceeeEEEEeCCCCCcEEEEec-----CCe
Q 019059 121 GKINCVLWWSSGRHDKLVSI--DEENIFLWSLDCSNKNAQVQS--KQSSGMLHYLSGGAWDPHDVNAVAATC-----ESS 191 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~--~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~ 191 (346)
.....++++++|+ ++++.. .++.++||.+.+++ ...+.. .....+...+.+++++++++.+++-.. +..
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6789999999998 355532 23435666665321 111100 111234557899999999875555433 578
Q ss_pred EEEEEccCCCccceeecc-------c-eeEEEeCCCCCcEEEEec---CCCeEEEEEcccCCcceeeecCC---------
Q 019059 192 VQFWDLRSMGKTNSIEHA-------H-VRNVDYDTKKKHLLVTAA---DESGIHLWDLRMLKAPIQELPGH--------- 251 (346)
Q Consensus 192 i~i~d~~~~~~~~~~~~~-------~-v~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~--------- 251 (346)
|.+||+.+++....+... . +..+++++++..++++.. .++.|.+||+.+ ....+.+..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~-g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQT-GLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTT-CCEEEECTTCTTTSCCSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCC-CCEEEEecCCCcccccccc
Confidence 999999988866555421 1 689999987654666655 678999999875 3333333221
Q ss_pred --------------------CcceEEEEeCCCCCcEEEEecCCC-eEEEEecCCCCCCCCCcccccCCccccccccccc-
Q 019059 252 --------------------THWTWAVCCNPEYDGFILSAGTDS-TVNLWLVSTSNHDELPSESLVESPNQRANSLLNS- 309 (346)
Q Consensus 252 --------------------~~~v~~v~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 309 (346)
...+..++|+|++ +.|+.+..++ .+..++......... ...+....
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~-----------~~~~~~~~~ 241 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQL-----------TDAELGSKI 241 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTC-----------CHHHHHTTC
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCC-----------Chhhhhcce
Confidence 1235789999999 7777776665 454444321000000 00111111
Q ss_pred -cccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 310 -YSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 310 -~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
..++......++++++|. ++++...++.|.+|+.
T Consensus 242 ~~~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 242 ERYSEKPICDGISIDKDHN-IYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEECCSCSCEEECTTCC-EEEEEGGGTEEEEEET
T ss_pred EecccCCCCceEEECCCCC-EEEEccCCCeEEEEEC
Confidence 112333467899999986 8888888999999997
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.23 E-value=3e-09 Score=89.75 Aligned_cols=241 Identities=8% Similarity=-0.065 Sum_probs=144.1
Q ss_pred eEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEee------cCCcceEEEEecCcccCCCCCccceeeeee
Q 019059 43 EVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS------TGESYGAAIWQIPELYGQLNSPQLERIAAL 116 (346)
Q Consensus 43 ~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~------~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 116 (346)
.+.+++... ....-..-.+. .+ .+.++|+++++.++... |..++.|.+||+. +.+.+.++
T Consensus 47 ~vsvID~~t--~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~---------T~~vv~~I 112 (368)
T 1mda_H 47 ENWVSCAGC--GVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV---------TFLPIADI 112 (368)
T ss_dssp EEEEEETTT--TEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT---------TCCEEEEE
T ss_pred eEEEEECCC--CeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC---------CCCEEEEE
Confidence 677776544 33332322333 34 79999999999887421 1246889999998 77788877
Q ss_pred ecc-------CCceEEEEeecCCCCcEEEEec-CCeEEE--EEcCCCCCCceeeecccCCCc---eeeEEEEe-------
Q 019059 117 DAH-------VGKINCVLWWSSGRHDKLVSID-EENIFL--WSLDCSNKNAQVQSKQSSGML---HYLSGGAW------- 176 (346)
Q Consensus 117 ~~~-------~~~i~~~~~~~~~~~~~~~~~~-d~~i~v--wd~~~~~~~~~~~~~~~~~~~---~~v~~~~~------- 176 (346)
... ......+.++|||++++++... +..+.+ +|..+ ...+.... ..+. ..-.-+.+
T Consensus 113 ~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~~~~~p~g~~~~~~~~~dg~~~ 188 (368)
T 1mda_H 113 ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-CFHIHPGAAATHYLGSCPASLA 188 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-CCCCEEEETTEEECCCCTTSCE
T ss_pred ECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-ceEEccCCCeEEEEEcCCCCEE
Confidence 543 1235689999999985555433 567888 88864 11111000 0000 00000111
Q ss_pred ------------------------------CCCCCcEEEEecCCeEEEEEccCCC--ccceeec--------c---c-ee
Q 019059 177 ------------------------------DPHDVNAVAATCESSVQFWDLRSMG--KTNSIEH--------A---H-VR 212 (346)
Q Consensus 177 ------------------------------~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~--------~---~-v~ 212 (346)
.+++..++..+. +.+.+.|+.+.. ....+.. + . ..
T Consensus 189 ~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred EEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 223333444444 677777876432 1111110 0 0 22
Q ss_pred EEEeCCCCCcEEEEec---C-----CCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEec-CCCeEEEEecC
Q 019059 213 NVDYDTKKKHLLVTAA---D-----ESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAG-TDSTVNLWLVS 283 (346)
Q Consensus 213 ~~~~~~~~~~~l~~~~---~-----dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~-~d~~i~iwd~~ 283 (346)
.++++|++..++++.. . ++.+.++|+.+ .+.+..+... .....+.|+|++..++++.. .++.|.++|+.
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 3789999985554433 2 23566999997 4456666533 36889999999944667777 59999999999
Q ss_pred CCCCCCCCcccccCCccccccccccccccccceeeEEEeCC
Q 019059 284 TSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (346)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (346)
+ .+.+.++..... ...+++.+
T Consensus 346 t-------------------~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 346 S-------------------DQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp S-------------------CEEEEECCCCSC-CCEEECCC
T ss_pred C-------------------CcEEEEEECCCC-CCEEEeec
Confidence 9 788887765544 45666654
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=2.6e-09 Score=85.31 Aligned_cols=204 Identities=11% Similarity=0.002 Sum_probs=137.0
Q ss_pred cceeeeeeeccCC--ceEEEEeecCCCCcEEEEec--CCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEE
Q 019059 109 QLERIAALDAHVG--KINCVLWWSSGRHDKLVSID--EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAV 184 (346)
Q Consensus 109 ~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 184 (346)
..+.+.++ .|.. ....+.|++++. ++++++. ++.|.++|+.+++....+.... ......+++. +..++
T Consensus 8 ~~~vv~~~-p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 8 IVEVLNEF-PHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLL--NEKLY 79 (266)
T ss_dssp EEEEEEEE-ECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEEE
T ss_pred CceEEEEE-ECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEe--CCEEE
Confidence 34556666 4543 357999999864 4555443 6899999999887554443221 1122345554 45666
Q ss_pred EEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC--C---cceE
Q 019059 185 AAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH--T---HWTW 256 (346)
Q Consensus 185 ~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~---~~v~ 256 (346)
.+. .++.+.++|..+.+.+.++..+ . -.. +++++..+++ +..++.|.++|..+. +.+..+.-. . ..++
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g~~~g~g--lt~Dg~~l~v-s~gs~~l~viD~~t~-~v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWG--LATDGKILYG-SDGTSILYEIDPHTF-KLIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECCSSSCCE--EEECSSSEEE-ECSSSEEEEECTTTC-CEEEEEECEETTEECCCEE
T ss_pred EEEecCCEEEEEECCCCcEEEEEECCCCCeEE--EEECCCEEEE-ECCCCeEEEEECCCC-cEEEEEEECCCCcccccce
Confidence 665 5889999999999888887644 2 323 4456764554 456789999999874 345554421 1 1356
Q ss_pred EEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccc-------------cceeeEEEeC
Q 019059 257 AVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY-------------EDSVYGLAWS 323 (346)
Q Consensus 257 ~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~ 323 (346)
.+.|. ++ .+.+....++.|.+-|..+ ++.+..+.-. ......|+|+
T Consensus 156 ele~~-dg-~lyvn~~~~~~V~vID~~t-------------------g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 156 ELEYI-NG-EVWANIWQTDCIARISAKD-------------------GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp EEEEE-TT-EEEEEETTSSEEEEEETTT-------------------CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred eEEEE-CC-EEEEecCCCCeEEEEECCC-------------------CcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 78887 67 6666666788999999998 6655554321 1246899999
Q ss_pred CCCCcEEEEeecCCeEEEeeec
Q 019059 324 SREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 324 ~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
|+++++++++.....+.+.++.
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEe
Confidence 9998899999888988887763
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=1.8e-09 Score=89.45 Aligned_cols=199 Identities=10% Similarity=0.071 Sum_probs=124.0
Q ss_pred eeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEE
Q 019059 114 AALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQ 193 (346)
Q Consensus 114 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 193 (346)
..+...........|+++++.++++...++.|..|+.. ++ ...+.. +...+.+++++++++.+++...++.|.
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~-----~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLD-----ATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEE-----SCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeC-----CCCccceeeECCCCCEEEEECCCCEEE
Confidence 34444555677899999998766666678999999874 33 222211 123678999999998555544567899
Q ss_pred EEEccCCCccceee---cc---c-eeEEEeCCCCCcEEEE----ecC-------------CCeEEEEEcccCCcceeeec
Q 019059 194 FWDLRSMGKTNSIE---HA---H-VRNVDYDTKKKHLLVT----AAD-------------ESGIHLWDLRMLKAPIQELP 249 (346)
Q Consensus 194 i~d~~~~~~~~~~~---~~---~-v~~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~ 249 (346)
+||.. ++. ..+. .+ . ++.++++|+|. ++++ |.. .+.|..+|... +. +..+.
T Consensus 111 ~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~-~~~~~ 185 (305)
T 3dr2_A 111 RSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SP-LQRMA 185 (305)
T ss_dssp EECTT-SCE-EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CC-CEEEE
T ss_pred EECCC-CCE-EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC-Cc-EEEEe
Confidence 99986 442 2221 11 1 77899999998 7775 332 24677777654 22 22233
Q ss_pred CCCcceEEEEeCCCCCcEEEEecCC------CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeC
Q 019059 250 GHTHWTWAVCCNPEYDGFILSAGTD------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (346)
Q Consensus 250 ~~~~~v~~v~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (346)
.....+.++|+|++ ..|+.+... +.|.+|++.... . ...+..... ....+..++++
T Consensus 186 -~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~---l-----------~~~~~~~~~--~~~~pdgi~~d 247 (305)
T 3dr2_A 186 -DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGA---L-----------HDRRHFASV--PDGLPDGFCVD 247 (305)
T ss_dssp -EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTE---E-----------EEEEEEECC--SSSCCCSEEEC
T ss_pred -cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCC---c-----------cCCeEEEEC--CCCCCCeEEEC
Confidence 34556889999999 766666554 789999987510 0 000111111 12235678899
Q ss_pred CCCCcEEEEeecCCeEEEeeec
Q 019059 324 SREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 324 ~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
++|. +.++. .+ .|.+|+.+
T Consensus 248 ~~G~-lwv~~-~~-gv~~~~~~ 266 (305)
T 3dr2_A 248 RGGW-LWSSS-GT-GVCVFDSD 266 (305)
T ss_dssp TTSC-EEECC-SS-EEEEECTT
T ss_pred CCCC-EEEec-CC-cEEEECCC
Confidence 9987 55444 34 48888764
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.18 E-value=1.7e-08 Score=85.83 Aligned_cols=208 Identities=15% Similarity=0.181 Sum_probs=128.7
Q ss_pred cCCCCcEEEEecCCeEEEEEcCCCCCCceeeecc-------cCCCceeeEEEEeCCCCCcEEEEecC------CeEEEEE
Q 019059 130 SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-------SSGMLHYLSGGAWDPHDVNAVAATCE------SSVQFWD 196 (346)
Q Consensus 130 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d 196 (346)
.+.+++++.+..++.|.++|+.+.....++.... ..+ ......+...|++ .+++...+ +.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 7788766666678999999997542222222111 001 1245667888999 55555444 7899999
Q ss_pred ccCCCccceeeccc-----eeEEEeCCCCCcEEEEec-------------------CCCeEEEEEcccCCcceeeecCC-
Q 019059 197 LRSMGKTNSIEHAH-----VRNVDYDTKKKHLLVTAA-------------------DESGIHLWDLRMLKAPIQELPGH- 251 (346)
Q Consensus 197 ~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~- 251 (346)
..+.+.+..+..+. ...+.|+|+++ .+++.. ...+|.+||+.+ .+.+.++..-
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~tI~vg~ 248 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHSLTLGE 248 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEEEESCT
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeEEecCC
Confidence 99999888876432 55688899998 676663 367999999987 5566666542
Q ss_pred -CcceEEEEe--CCCCCcEEEEec------CCCeEEEEecCCCCCCCCCcccccCCccccccccc----cccccccceee
Q 019059 252 -THWTWAVCC--NPEYDGFILSAG------TDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL----NSYSDYEDSVY 318 (346)
Q Consensus 252 -~~~v~~v~~--~~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~ 318 (346)
......+.| +|++ +++++++ .+++|.+|....+ ...........+.+... .+ ..+.+-...+.
T Consensus 249 ~g~~P~~i~f~~~Pdg-~~aYV~~e~~~~~Lss~V~v~~~d~g--~~~~~~vIdi~~~~v~~-~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 249 ENRMALELRPLHDPTK-LMGFINMVVSLKDLSSSIWLWFYEDG--KWNAEKVIEIPAEPLEG-NLPEILKPFKAVPPLVT 324 (462)
T ss_dssp TEEEEEEEEECSSTTC-CEEEEEEEEETTTCCEEEEEEEEETT--EEEEEEEEEECCEECCS-SCCGGGGGGTEECCCCC
T ss_pred CCCccceeEeeECCCC-CEEEEEEeeeccCCCceEEEEEecCC--ceeEEEEEeCCCccccc-cccccccccccCCCcee
Confidence 133455555 9999 6666655 5668887766431 00000000000000000 00 01111123478
Q ss_pred EEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 319 GLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 319 ~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.|.++||++++.++.-..+.|.+|++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 899999999888888889999999974
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.17 E-value=9.5e-09 Score=82.07 Aligned_cols=198 Identities=7% Similarity=-0.083 Sum_probs=135.9
Q ss_pred cccc--ceEEeeecCCCCceEEEEeecC-CcceEEEEecCcccCCCCCccceeeeeeeccCC-ceEEEEeecCCCCcEEE
Q 019059 63 SHPN--EIWDLSSCPFDQRIFSTVFSTG-ESYGAAIWQIPELYGQLNSPQLERIAALDAHVG-KINCVLWWSSGRHDKLV 138 (346)
Q Consensus 63 ~h~~--~v~~~~~~~~~~~l~~~~~~~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~ 138 (346)
.|.. ....+.|+|++ .|..+. +. .++.|.+.|+. +++.+..+..... ....+++ ++..++++
T Consensus 16 p~~~~~f~~Gl~~~~dg-~Lyvst--g~~~~s~v~~iD~~---------tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~ 81 (266)
T 2iwa_A 16 PHDPYAFTQGLVYAEND-TLFEST--GLYGRSSVRQVALQ---------TGKVENIHKMDDSYFGEGLTL--LNEKLYQV 81 (266)
T ss_dssp ECCTTCCEEEEEECSTT-EEEEEE--CSTTTCEEEEEETT---------TCCEEEEEECCTTCCEEEEEE--ETTEEEEE
T ss_pred ECCCCCCcccEEEeCCC-eEEEEC--CCCCCCEEEEEECC---------CCCEEEEEecCCCcceEEEEE--eCCEEEEE
Confidence 4553 35799999985 555542 21 25789999998 6777776643221 1223444 45555556
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc---c----e
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---H----V 211 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~----v 211 (346)
.-.++.+.++|..+.+....+... .. . ...++++++.++++..++.|.++|..+.+....+..+ . +
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~g--~~---~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTHQ--MK---D--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEECC--SS---S--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EecCCEEEEEECCCCcEEEEEECC--CC---C--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 566899999999876544443222 01 1 2334557888888877899999999998877776632 1 6
Q ss_pred eEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC-------------CcceEEEEeCCCCCcEEEEecCCCeEE
Q 019059 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH-------------THWTWAVCCNPEYDGFILSAGTDSTVN 278 (346)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~v~~~~~~~~~l~s~~~d~~i~ 278 (346)
+.+.|. ++. +++....++.|.+.|..+ .+.+..+... ....+.|+|+|++.++++++...+.|.
T Consensus 155 nele~~-dg~-lyvn~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 155 NELEYI-NGE-VWANIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEEEEE-TTE-EEEEETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred eeEEEE-CCE-EEEecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 788888 664 676666778999999997 4456655421 135589999999867888888889999
Q ss_pred EEecCC
Q 019059 279 LWLVST 284 (346)
Q Consensus 279 iwd~~~ 284 (346)
..++..
T Consensus 232 ~i~l~~ 237 (266)
T 2iwa_A 232 EIKLHL 237 (266)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 998876
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=1.1e-07 Score=77.08 Aligned_cols=196 Identities=9% Similarity=-0.037 Sum_probs=123.9
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccC
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRS 199 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~ 199 (346)
..+..++|++++..++++....+.|..++++.... ...... ......+++++|++..++.+. ..+.|.++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~----~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQ----DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECT----TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEEC----CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 45789999998776566656678999999875432 222211 113578899999777776665 467999999875
Q ss_pred CCccceeecc-c-eeEEEeCCCCCcEEEEecC--CCeEEEEEcccCCcceeeec-CCCcceEEEEeCCCCCcEEEEecCC
Q 019059 200 MGKTNSIEHA-H-VRNVDYDTKKKHLLVTAAD--ESGIHLWDLRMLKAPIQELP-GHTHWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 200 ~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~-~~~~~v~~v~~~~~~~~~l~s~~~d 274 (346)
.........+ . ...++++|++..++++... .+.|..+++.. . ....+. ........++++|++..+.++-...
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-T-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-C-CCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-C-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 4332222222 2 8999999976545555443 46888888763 2 222222 2234678899999873555666667
Q ss_pred CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 275 STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 275 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+.|.++|... ......+... .....++.. +..++++....+.|.+++.+
T Consensus 189 ~~I~~~~~~g-------------------~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 189 HRAECLNPAQ-------------------PGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp TEEEEEETTE-------------------EEEEEEEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEecCC-------------------CceEEEecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 8999999875 2221112221 223556654 34466666667888888764
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.09 E-value=1.6e-08 Score=79.80 Aligned_cols=190 Identities=12% Similarity=0.097 Sum_probs=121.3
Q ss_pred eeeeeeeccCCc--eEEEEeecCCCCcEEEEecCC--eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEE
Q 019059 111 ERIAALDAHVGK--INCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 111 ~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (346)
+.+.++ .|... ...+.|+ ++ .++.+++.+| .|+++|+.+++......... ...-.+++. ++..++..
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~--~g~~ly~l 102 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGK----RYFGEGISD--WKDKIVGL 102 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCT----TCCEEEEEE--ETTEEEEE
T ss_pred EEEEEe-cCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCC----ccceeEEEE--eCCEEEEE
Confidence 445555 45433 4788888 55 4566667665 89999999887655543321 001223444 35566665
Q ss_pred e-cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC--CC---cceEEEE
Q 019059 187 T-CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG--HT---HWTWAVC 259 (346)
Q Consensus 187 ~-~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~v~~v~ 259 (346)
. .++.+.+||..+.+.+.++..+. -..++ +++. .|+.+..++.|.++|..+.+ .+..+.. .. ..++.+.
T Consensus 103 tw~~~~v~v~D~~t~~~~~ti~~~~eG~glt--~dg~-~L~~SdGs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 103 TWKNGLGFVWNIRNLRQVRSFNYDGEGWGLT--HNDQ-YLIMSDGTPVLRFLDPESLT-PVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSSCCCCEE--ECSS-CEEECCSSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEE
T ss_pred EeeCCEEEEEECccCcEEEEEECCCCceEEe--cCCC-EEEEECCCCeEEEEcCCCCe-EEEEEEeccCCccccccceeE
Confidence 5 58899999999999988887443 23333 4566 45554557889999998743 4555442 12 2345577
Q ss_pred eCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccc------------ccceeeEEEeCCCCC
Q 019059 260 CNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD------------YEDSVYGLAWSSREP 327 (346)
Q Consensus 260 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~ 327 (346)
|. +| .+.+..-.++.|.+.|.++ ++.+..+.- .....+.|+|+|+++
T Consensus 179 ~~-~G-~lyan~w~~~~I~vIDp~t-------------------G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 179 WV-DG-EIFANVWQTNKIVRIDPET-------------------GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp EE-TT-EEEEEETTSSEEEEECTTT-------------------CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred EE-CC-EEEEEEccCCeEEEEECCC-------------------CcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 76 67 6666666688999999988 444433321 123468999999988
Q ss_pred cEEEEee
Q 019059 328 WIFASLS 334 (346)
Q Consensus 328 ~~l~s~~ 334 (346)
+++++|-
T Consensus 238 ~lfVTGK 244 (262)
T 3nol_A 238 RLFVTGK 244 (262)
T ss_dssp EEEEEET
T ss_pred EEEEECC
Confidence 7777764
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=2.6e-08 Score=91.49 Aligned_cols=184 Identities=8% Similarity=-0.032 Sum_probs=116.5
Q ss_pred EEEeecCCCCcEEEEecCC-------------------eEEEEEcCCCCCCceeeecccCC----CceeeEEEEeCCCC-
Q 019059 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSG----MLHYLSGGAWDPHD- 180 (346)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~- 180 (346)
.+++++++.. ++++..++ .|..+|..+++............ ......-+....+|
T Consensus 247 ~~~~d~~~~~-vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDAELNT-MYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcCCCCE-EEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 5678888774 55443332 59999999887666655422110 01112222233356
Q ss_pred --CcEEEEecCCeEEEEEccCCCccceeeccc-------------------------------------eeEEEeCCCCC
Q 019059 181 --VNAVAATCESSVQFWDLRSMGKTNSIEHAH-------------------------------------VRNVDYDTKKK 221 (346)
Q Consensus 181 --~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------------------------v~~~~~~~~~~ 221 (346)
..++.++.+|.++++|.++++.+..+.... -..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 567888889999999999998765543211 12568888887
Q ss_pred cEEEEecC-------------------------------------------CCeEEEEEcccCCcceeeecCCCcceEEE
Q 019059 222 HLLVTAAD-------------------------------------------ESGIHLWDLRMLKAPIQELPGHTHWTWAV 258 (346)
Q Consensus 222 ~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~v 258 (346)
++++... .+.|..||+.+ .+.+-.+. +..++...
T Consensus 406 -~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~-~~~~~~~g 482 (677)
T 1kb0_A 406 -LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVE-HVSPWNGG 482 (677)
T ss_dssp -EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEE-ESSSCCCC
T ss_pred -EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecC-CCCCCcCc
Confidence 5655422 27899999987 44454444 33344445
Q ss_pred EeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccccc-ceeeEEEeCCCCCcEEEE
Q 019059 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE-DSVYGLAWSSREPWIFAS 332 (346)
Q Consensus 259 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s 332 (346)
.+...+ .+++.++.|+.+++||.++ ++.+..+.... ....-+.|.++|+.+++.
T Consensus 483 ~~~~~g-~~v~~g~~dg~l~a~D~~t-------------------G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 483 TLTTAG-NVVFQGTADGRLVAYHAAT-------------------GEKLWEAPTGTGVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp EEEETT-TEEEEECTTSEEEEEETTT-------------------CCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred ceEeCC-CEEEEECCCCcEEEEECCC-------------------CceeeeeeCCCCcccCCEEEEeCCEEEEEE
Confidence 566677 7888889999999999998 88877765332 222345666778644444
No 234
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=1.8e-07 Score=78.00 Aligned_cols=238 Identities=9% Similarity=0.040 Sum_probs=139.6
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee--------------------ccCCceEEE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--------------------AHVGKINCV 126 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~i~~~ 126 (346)
...+++|.+++..+.+. ..++.|..|+.. ... +..+. .....+..+
T Consensus 20 ~p~~i~~d~~g~~l~v~----~~~~~i~~~~~~---------~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi 85 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTS----VQDGRVIKYEGP---------NSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDI 85 (322)
T ss_dssp CCCCEECCTTCSSEEEE----CTTSEEEEECCT---------TTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEE
T ss_pred CceEEEEcCCCCEEEEE----cCCCeEEEECCC---------CCc-eEEEecccccccccccccccchhccccCCCCceE
Confidence 45678899987766664 467788888865 111 11111 011357889
Q ss_pred Eeec-CCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC-CCCcEEEEec----------------
Q 019059 127 LWWS-SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATC---------------- 188 (346)
Q Consensus 127 ~~~~-~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~---------------- 188 (346)
++.+ ++. ++++...+.|..+|..++. ...+..............+++.+ ++...++...
T Consensus 86 ~~~~~~g~--l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 86 SYNLQNNQ--LYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp EEETTTTE--EEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTC
T ss_pred EEcCCCCc--EEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccC
Confidence 9997 665 4544334558888876432 11121111111112467899999 8865555422
Q ss_pred -CCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC-cceeeecCCCcceEEEEeCCCCC
Q 019059 189 -ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEYD 265 (346)
Q Consensus 189 -d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~v~~~~~~~ 265 (346)
++.|..+|..+++......... ...++++|++..++++-...+.|.+|++.... .....+..... ...+++.++|
T Consensus 163 ~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G- 240 (322)
T 2fp8_A 163 KTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADG- 240 (322)
T ss_dssp CCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTS-
T ss_pred CCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCC-
Confidence 3678889987665432222112 78999999997455555667899999987421 11222221223 7789999999
Q ss_pred cEEEEecC----------CCeEEEEecCCCCCCCCCcccccCCccccccccccccccc----cceeeEEEeCCCCCcEEE
Q 019059 266 GFILSAGT----------DSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY----EDSVYGLAWSSREPWIFA 331 (346)
Q Consensus 266 ~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~ 331 (346)
.+.++... .+.|..+|.. ++.+..+... -..++.+.+. ++ .+++
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~--------------------G~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~v 298 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEF--------------------GNILEVIPLPPPFAGEHFEQIQEH-DG-LLYI 298 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTT--------------------SCEEEEEECCTTTTTSCCCEEEEE-TT-EEEE
T ss_pred CEEEEecCcccccccCCCccEEEEECCC--------------------CCEEEEEECCCCCccccceEEEEe-CC-EEEE
Confidence 66555443 3567777764 2333333221 1335666663 45 4777
Q ss_pred EeecCCeEEEeeec
Q 019059 332 SLSYDGRVRNHMLE 345 (346)
Q Consensus 332 s~~~d~~v~vw~~~ 345 (346)
+....+.|.+++++
T Consensus 299 ~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 299 GTLFHGSVGILVYD 312 (322)
T ss_dssp ECSSCSEEEEEEC-
T ss_pred eecCCCceEEEecc
Confidence 77778899998875
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.06 E-value=7.7e-11 Score=100.35 Aligned_cols=174 Identities=11% Similarity=-0.000 Sum_probs=93.9
Q ss_pred cEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---e
Q 019059 135 DKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---V 211 (346)
Q Consensus 135 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---v 211 (346)
.+++++.|+.|+.||..+++...+... . .+.+..+..++..+++++.|+.|+.||..+++.+..+.... +
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~-~------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE-D------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-C------CSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC-C------CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 377778899999999998876655543 1 33344455567777777889999999999888765543211 2
Q ss_pred e-EEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCC
Q 019059 212 R-NVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL 290 (346)
Q Consensus 212 ~-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 290 (346)
. +..+. .+. .+++++.++.++.||.++ ++.+..+..+. ...++|++ ..+++++.|+.|+.||.++
T Consensus 84 ~~sp~~~-~~~-~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~t------ 149 (369)
T 2hz6_A 84 QASPCRS-SDG-ILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTKT------ 149 (369)
T ss_dssp TTCSCC-------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSS------
T ss_pred ccCceEe-cCC-EEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccC-CEEEEEecCCEEEEEECCC------
Confidence 1 11221 233 577788889999999987 44555554432 23466777 8889999999999999998
Q ss_pred CcccccCCccccccccccccccccceeeEEEeCCCC---CcEEEEeecCCeEEEeeec
Q 019059 291 PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSRE---PWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~s~~~d~~v~vw~~~ 345 (346)
++.+..+..+. .....+.++. . .++.++.|+.|+.||.+
T Consensus 150 -------------G~~~W~~~~~~--~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 150 -------------RELRWNATYFD--YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp -------------SSCCCEEEEEE--ECCBCCCCCTTCCC-CEEEEETSCEEEEECTT
T ss_pred -------------CCEEEeEeccc--ccCccccCCccccc-eEEEECCCCEEEEEECC
Confidence 55544433211 2333444421 3 45667888999998864
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=1.5e-08 Score=89.28 Aligned_cols=202 Identities=13% Similarity=0.057 Sum_probs=128.5
Q ss_pred cCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe-C-CCCCcEEEEe------------------cC
Q 019059 130 SSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW-D-PHDVNAVAAT------------------CE 189 (346)
Q Consensus 130 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~------------------~d 189 (346)
+||+++++....+..|.+.|+.+.+....+ .... + .....+++ + |+++++++++ .+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii-~ip~-g--~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAIL-EIPN-A--KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEE-ECSS-C--CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEE-eCCC-C--CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 489986666566789999999976543322 2111 1 15678887 5 8999998885 24
Q ss_pred CeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCC-------------------------------------C
Q 019059 190 SSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADE-------------------------------------S 231 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d-------------------------------------g 231 (346)
+.+.+.|..+.+...++.-+. ...++++|+|.+.+++.... +
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred ceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 679999999988777776433 67788999998444444322 1
Q ss_pred eEEEEEccc--CCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccc
Q 019059 232 GIHLWDLRM--LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS 309 (346)
Q Consensus 232 ~i~i~d~~~--~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (346)
.|.+.|.++ ....+..+.. .....++.++|||...++++..+.+|.++|+.+..... ...-......+..
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~-------~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVF-------YENADPRSAVVAE 326 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHH-------HSCCCGGGGEEEC
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccc-------ccccCcccceEEE
Confidence 355666654 1111223321 23457789999994455556678899999999610000 0000000112223
Q ss_pred cccccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 310 YSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 310 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
...- .....++|+|+| +..++.-.|++|.+|+++
T Consensus 327 v~vG-~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 327 PELG-LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CBCC-SCEEEEEECTTS-EEEEEETTTTEEEEEEHH
T ss_pred cCCC-CCcceEEECCCC-eEEEEEecCCcEEEEEhh
Confidence 3222 347889999999 688889999999999975
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.04 E-value=3.2e-08 Score=78.13 Aligned_cols=185 Identities=10% Similarity=0.085 Sum_probs=124.9
Q ss_pred eccccc--eEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEE
Q 019059 62 FSHPNE--IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVS 139 (346)
Q Consensus 62 ~~h~~~--v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 139 (346)
+.|... ...+.|+. ..|..+ .|.++.|+++|++ +++.+..+ - ..........+++..++++.
T Consensus 49 ~phd~~~ftqGL~~~~--~~Ly~s---tG~~g~v~~iD~~---------Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 49 YPHATNAFTQGLVFHQ--GHFFES---TGHQGTLRQLSLE---------SAQPVWME-R-LGNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp EECCTTCCEEEEEEET--TEEEEE---ETTTTEEEECCSS---------CSSCSEEE-E-CTTCCEEEEEECSSCEEEEE
T ss_pred EcCCCccccceEEEEC--CEEEEE---cCCCCEEEEEECC---------CCcEEeEE-C-CCCcceeEEEEeCCEEEEEE
Confidence 345533 46888873 455555 3788889999998 66666665 2 23444433455667667776
Q ss_pred ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc-------ee
Q 019059 140 IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-------VR 212 (346)
Q Consensus 140 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------v~ 212 (346)
-.++.+.+||..+.+...++.... .-..++ ++++.|+.+..++.|.++|..+.+....+.... ++
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~~~------eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRYSG------EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEECSS------CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred ccCCEEEEEECCcCcEEEEEeCCC------ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence 678999999999766554443321 223444 467888888778999999999998877765321 67
Q ss_pred EEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC-------------CCcceEEEEeCCCCCcEEEEecC
Q 019059 213 NVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-------------HTHWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 213 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~v~~v~~~~~~~~~l~s~~~ 273 (346)
.+.|. +|. +++..-.+..|.+.|.++ ++.+..+.. -..-.+.|+++|++.++++||-.
T Consensus 185 eLe~~-dG~-lyanvw~s~~I~vIDp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 185 ELECA-NGV-IYANIWHSSDVLEIDPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEEEE-TTE-EEEEETTCSEEEEECTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred ccEEe-CCE-EEEEECCCCeEEEEeCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 78887 665 776666778999999987 444444432 12356899999988566676643
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.02 E-value=3.8e-08 Score=77.69 Aligned_cols=185 Identities=8% Similarity=0.050 Sum_probs=122.9
Q ss_pred eccccc--eEEeeecCCCCceEEEEeecCCc--ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEE
Q 019059 62 FSHPNE--IWDLSSCPFDQRIFSTVFSTGES--YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 62 ~~h~~~--v~~~~~~~~~~~l~~~~~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 137 (346)
+.|... ...+.|+ ++ .|..+. |.+ ..|+++|++ +++.+..+... .........+++..+++
T Consensus 37 ~phd~~~ftqGL~~~-~~-~Lyest---G~~g~S~v~~vD~~---------Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ 101 (262)
T 3nol_A 37 YPHDTKAFTEGFFYR-NG-YFYEST---GLNGRSSIRKVDIE---------SGKTLQQIELG-KRYFGEGISDWKDKIVG 101 (262)
T ss_dssp EECCTTCEEEEEEEE-TT-EEEEEE---EETTEEEEEEECTT---------TCCEEEEEECC-TTCCEEEEEEETTEEEE
T ss_pred ecCCCCcccceEEEE-CC-EEEEEC---CCCCCceEEEEECC---------CCcEEEEEecC-CccceeEEEEeCCEEEE
Confidence 355543 3788998 45 444442 444 489999998 67777776543 34445444455666666
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc---c----
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA---H---- 210 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~---- 210 (346)
+.-.++.+.++|..+.+...++.... ....+++++..|+.+..++.|.++|..+.+....+... .
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~ 173 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPE 173 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCC
T ss_pred EEeeCCEEEEEECccCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccc
Confidence 66668999999999876555444321 22233356788888777888999999999887776532 2
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCC------------CcceEEEEeCCCCCcEEEEec
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGH------------THWTWAVCCNPEYDGFILSAG 272 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~v~~v~~~~~~~~~l~s~~ 272 (346)
++.+.|. +|. +++..-.+..|.+.|.++ .+.+..+... ....+.|+|+|++.+++++|-
T Consensus 174 lNELe~~-~G~-lyan~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 174 LNELEWV-DGE-IFANVWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEEEE-TTE-EEEEETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cceeEEE-CCE-EEEEEccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6678886 665 676666778999999987 4455444321 135689999999845555553
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.01 E-value=5.2e-08 Score=76.93 Aligned_cols=189 Identities=12% Similarity=0.018 Sum_probs=123.8
Q ss_pred eeeeeeeccCCc--eEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-
Q 019059 111 ERIAALDAHVGK--INCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT- 187 (346)
Q Consensus 111 ~~~~~~~~~~~~--i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 187 (346)
+.+.++ .|... ...+.|+ +..++.+++.++.|+++|+.+++..... ... ...-.++++. +..|+...
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~--g~~Ly~ltw 113 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLG----NIFAEGLASD--GERLYQLTW 113 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT----TCCEEEEEEC--SSCEEEEES
T ss_pred EEEEEE-cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC----CcceeEEEEe--CCEEEEEEc
Confidence 444555 45433 4678886 3445666688899999999998876666 322 0012335553 45555554
Q ss_pred cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC--CCc---ceEEEEeC
Q 019059 188 CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG--HTH---WTWAVCCN 261 (346)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~---~v~~v~~~ 261 (346)
.++.+.+||..+.+.+.++..+. -..++ +++. .|+.+..++.|+++|..+. +.+..+.- +.. .++.+.|.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt--~Dg~-~L~vSdGs~~l~~iDp~T~-~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYSGEGWGLC--YWNG-KLVRSDGGTMLTFHEPDGF-ALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECSSCCCCEE--EETT-EEEEECSSSEEEEECTTTC-CEEEEEECEETTEECCCEEEEEEE
T ss_pred cCCEEEEEECCcCcEEEEEeCCCceeEEe--cCCC-EEEEECCCCEEEEEcCCCC-eEEEEEEeCCCCcccccccccEEe
Confidence 58999999999999888887433 33444 4566 4555556889999998874 34555442 222 34667776
Q ss_pred CCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccc-------------ccceeeEEEeCCCCCc
Q 019059 262 PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSD-------------YEDSVYGLAWSSREPW 328 (346)
Q Consensus 262 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~ 328 (346)
+| .+.+..-.++.|.+-|.++ ++.+..+.- .....+.|+|+|++++
T Consensus 190 -dG-~lyanvw~s~~I~vIDp~T-------------------G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~r 248 (268)
T 3nok_A 190 -NG-VIYANIWHSSDVLEIDPAT-------------------GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGR 248 (268)
T ss_dssp -TT-EEEEEETTCSEEEEECTTT-------------------CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCC
T ss_pred -CC-EEEEEECCCCeEEEEeCCC-------------------CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCE
Confidence 67 6666665678999999988 554443321 1234689999999887
Q ss_pred EEEEee
Q 019059 329 IFASLS 334 (346)
Q Consensus 329 ~l~s~~ 334 (346)
++++|-
T Consensus 249 lfVTGK 254 (268)
T 3nok_A 249 IFMTGK 254 (268)
T ss_dssp EEEEET
T ss_pred EEEeCC
Confidence 888774
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=3.2e-10 Score=96.52 Aligned_cols=182 Identities=9% Similarity=-0.056 Sum_probs=94.0
Q ss_pred CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCC
Q 019059 76 FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK 155 (346)
Q Consensus 76 ~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 155 (346)
++..++++ +.|+.|..||.. +++.+-.+.. +.+.+..+..++. ++++++.|+.|+.||..+++.
T Consensus 8 ~~~~v~~g----s~dg~v~a~d~~---------tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVS----TLDGSLHAVSKR---------TGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEE----ETTSEEEEEETT---------TCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEE----cCCCEEEEEECC---------CCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCce
Confidence 35566664 578899999988 6666666654 4555555666665 356657899999999987765
Q ss_pred CceeeecccCCCceeeE-EEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccceeEEEeCCCCCcEEEEecCCCeEE
Q 019059 156 NAQVQSKQSSGMLHYLS-GGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 156 ~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
........ ...+. ...+. .+..+++++.++.|+.||.++++....+.... ...++|++. .+++++.++.|+
T Consensus 72 ~w~~~~~~----~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~-~v~~~~~dg~v~ 143 (369)
T 2hz6_A 72 LTKLPFTI----PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTS-LLYLGRTEYTIT 143 (369)
T ss_dssp SEECSCCH----HHHHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEE
T ss_pred eeeeeccC----ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCC-EEEEEecCCEEE
Confidence 43332110 00110 01111 34567777889999999999999877665332 234556666 788888899999
Q ss_pred EEEcccCCcceeeecCCCcceEEEEeCCCC--CcEEEEecCCCeEEEEecCC
Q 019059 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEY--DGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~l~s~~~d~~i~iwd~~~ 284 (346)
.||.++ ++.+..+..+ ......++++. ...+++++.||.|+.||.++
T Consensus 144 a~d~~t-G~~~W~~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 144 MYDTKT-RELRWNATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp CCCSSS-SSCCCEEEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EEECCC-CCEEEeEecc--cccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 999987 4344443321 12233344421 13466788899999999988
No 241
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.95 E-value=1.8e-06 Score=80.52 Aligned_cols=198 Identities=11% Similarity=0.140 Sum_probs=114.8
Q ss_pred ceEEeeec-CCCCceEEEEeecCC-cceEEEEecCcccCCCCCccc-eeee-eeeccCCceEEEEeecCCCCcEEEEecC
Q 019059 67 EIWDLSSC-PFDQRIFSTVFSTGE-SYGAAIWQIPELYGQLNSPQL-ERIA-ALDAHVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 67 ~v~~~~~~-~~~~~l~~~~~~~~~-d~~i~vw~~~~~~~~~~~~~~-~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
.+...+|| |||+.|+.+...+|. ...|.++|+. .+ +.+. .+. .....+.|+||++.++++...+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~---------~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRIS---------DPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETT---------CTTCCCCCCEE---EECSCCEECSSTTEEEEEEECT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECC---------CCCEeCCcccc---CceeeEEEecCCCEEEEEEECC
Confidence 67889999 999998877644333 3479999987 22 2111 121 1234688999998755555321
Q ss_pred ----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec---CCeEEEEEccCCC-cc--ceeeccc--
Q 019059 143 ----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC---ESSVQFWDLRSMG-KT--NSIEHAH-- 210 (346)
Q Consensus 143 ----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~--~~~~~~~-- 210 (346)
..|+++++.++........... .......+.|+||+++|+.... ...|+++|+.++. .. ..+....
T Consensus 243 ~~~~~~v~~~~lgt~~~~~~lv~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~ 320 (751)
T 2xe4_A 243 TLRENKVWRHVMGKLQSEDVCLYEEH--NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG 320 (751)
T ss_dssp TCCEEEEEEEETTSCGGGCEEEEECC--CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT
T ss_pred CCCCCEEEEEECCCCchhcEEEEecC--CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC
Confidence 3688888876543222222111 1123567899999999887763 4578889998763 22 3332222
Q ss_pred -eeEEEeCCCCCcEEEEecCC----CeEEEEEcccCCcceee-ecCCCc--ceEEEEeCCCCCcEEEEecCCCeEE--EE
Q 019059 211 -VRNVDYDTKKKHLLVTAADE----SGIHLWDLRMLKAPIQE-LPGHTH--WTWAVCCNPEYDGFILSAGTDSTVN--LW 280 (346)
Q Consensus 211 -v~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~-~~~~~~--~v~~v~~~~~~~~~l~s~~~d~~i~--iw 280 (346)
..++.|+. +..+++....+ ..|..+|+... ..... +..+.. .+..+.+. +..++++...++..+ ++
T Consensus 321 ~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~ 396 (751)
T 2xe4_A 321 VRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTM 396 (751)
T ss_dssp CCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEE
T ss_pred ceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEE
Confidence 55566554 44355555544 35666676532 12233 333433 34555554 436777777788554 45
Q ss_pred ec
Q 019059 281 LV 282 (346)
Q Consensus 281 d~ 282 (346)
|+
T Consensus 397 dl 398 (751)
T 2xe4_A 397 MA 398 (751)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.95 E-value=1.2e-07 Score=79.06 Aligned_cols=215 Identities=5% Similarity=-0.080 Sum_probs=134.6
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCC
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN 156 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 156 (346)
+..+.++ ..++.|..+|.. ++...........+.++...+++. +.+++.++.|..+|.. ++..
T Consensus 107 ~~~l~v~----t~~~~l~~~d~~----------g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~ 169 (330)
T 3hxj_A 107 EDILYVT----SMDGHLYAINTD----------GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEK 169 (330)
T ss_dssp TTEEEEE----CTTSEEEEECTT----------SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEE
T ss_pred CCEEEEE----ecCCEEEEEcCC----------CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEe
Confidence 3445553 467788888854 233333333444566667777776 6667678999999987 5433
Q ss_pred ceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc--eeEEEeCCCCCcEEEEecCCCeEE
Q 019059 157 AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 157 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
...... ...+.++...+++. +.+++ +.|..+| .+++......... +.++...+++. +..++.++.+.
T Consensus 170 ~~~~~~-----~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~ 238 (330)
T 3hxj_A 170 WRFKTN-----DAITSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLY 238 (330)
T ss_dssp EEEECS-----SCCCSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEE
T ss_pred EEEecC-----CCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEE
Confidence 333211 12456666766665 55555 7899999 6666555444332 88888888885 45566677888
Q ss_pred EEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccccccccccc
Q 019059 235 LWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYE 314 (346)
Q Consensus 235 i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (346)
.+|.. ...+..+......+..+.+.+++ .|..++.++.|..+|. . ++.+..+....
T Consensus 239 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~-------------------g~~~~~~~~~~ 294 (330)
T 3hxj_A 239 AINPD--GTEKWRFKTGKRIESSPVIGNTD--TIYFGSYDGHLYAINP-D-------------------GTEKWNFETGS 294 (330)
T ss_dssp EECTT--SCEEEEEECSSCCCSCCEECTTS--CEEEECTTCEEEEECT-T-------------------SCEEEEEECSS
T ss_pred EECCC--CCEeEEeeCCCCccccceEcCCC--eEEEecCCCCEEEECC-C-------------------CcEEEEEEcCC
Confidence 88743 33444554444444556666555 4667777888999986 4 34444443334
Q ss_pred ceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 315 DSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 315 ~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
..+.++...+++. |..++.+|.+++...+
T Consensus 295 ~~~~~~~~d~~g~--l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 295 WIIATPVIDENGT--IYFGTRNGKFYALFNL 323 (330)
T ss_dssp CCCSCCEECTTCC--EEEECTTSCEEEEEC-
T ss_pred ccccceEEcCCCE--EEEEcCCCeEEEEecc
Confidence 4577788878875 5568889999887653
No 243
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.94 E-value=4.2e-06 Score=70.44 Aligned_cols=233 Identities=9% Similarity=-0.019 Sum_probs=138.2
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIF 146 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~ 146 (346)
.-.|.+..+ ...|+.+ ....|+..+++ .... ..+......+..++|.+.+..++.+-...+.|.
T Consensus 35 ~~~C~~~~~-~~~ll~~-----~~~~I~~i~~~---------g~~~-~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~ 98 (349)
T 3v64_C 35 RRSCKALGP-EPVLLFA-----NRIDIRQVLPH---------RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRIL 98 (349)
T ss_dssp SSCEEESSS-CCEEEEE-----CBSCEEEECTT---------SCCE-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCccccccc-CceeEee-----cccceEEEeCC---------CCee-EEeecCCCceEEEEEeccccEEEEEeccCCceE
Confidence 344555555 4455553 44467777765 2122 222223345789999987776555556678999
Q ss_pred EEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcE
Q 019059 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHL 223 (346)
Q Consensus 147 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~ 223 (346)
.++++... ...+.... .....++++.+.+..|+.+. ..+.|.+.++........+... . ...++++|.+..+
T Consensus 99 r~~~~g~~-~~~~~~~~----~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 99 RANLNGSN-VEEVVSTG----LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp EEETTSCS-CEEEECSS----CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred EEecCCCC-ceEEEeCC----CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 99987543 22222211 12457788887666666554 4678999998755433323222 2 8999999977656
Q ss_pred EEEecCC-CeEEEEEcccCCcceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccc
Q 019059 224 LVTAADE-SGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ 301 (346)
Q Consensus 224 l~~~~~d-g~i~i~d~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 301 (346)
+++-... +.|..+++.. . ....+ ...-...+.|+++|++..+.++-...+.|..+|+..
T Consensus 174 y~td~~~~~~I~r~~~dG-~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG----------------- 234 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDG-S-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG----------------- 234 (349)
T ss_dssp EEEECSSSCEEEEEETTS-C-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-----------------
T ss_pred EEeccCCCCEEEEEeCCC-C-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC-----------------
Confidence 6666555 7888888764 2 22333 223345789999987735555556677899999874
Q ss_pred cccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 302 RANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 302 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
......+.........+++. .+ .++++-...+.|..++
T Consensus 235 --~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 235 --SHRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSAN 272 (349)
T ss_dssp --CSCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEE
T ss_pred --CceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEE
Confidence 11111111112234566663 23 3666666666666655
No 244
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.93 E-value=2.6e-07 Score=72.30 Aligned_cols=191 Identities=9% Similarity=0.061 Sum_probs=120.6
Q ss_pred ceeeeeeeccCC--ceEEEEeecCCCCcEEEEecC--CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEE
Q 019059 110 LERIAALDAHVG--KINCVLWWSSGRHDKLVSIDE--ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVA 185 (346)
Q Consensus 110 ~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 185 (346)
.+.+.++ .|+. -...+.|++ + .++.+++.+ +.|+.+|+.+++.......... ..-.+++. .+..++.
T Consensus 9 ~~v~~~~-phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~----~fgeGi~~--~~~~ly~ 79 (243)
T 3mbr_X 9 YRVVKRY-PHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQRAEVPPP----YFGAGIVA--WRDRLIQ 79 (243)
T ss_dssp EEEEEEE-ECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEEEEECCTT----CCEEEEEE--ETTEEEE
T ss_pred eEEEEEc-CCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEEEEeCCCC----cceeEEEE--eCCEEEE
Confidence 4555666 5644 456889986 3 345555654 5999999998875554433221 01123343 3455555
Q ss_pred Ee-cCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC--CC---cceEEE
Q 019059 186 AT-CESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG--HT---HWTWAV 258 (346)
Q Consensus 186 ~~-~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~v~~v 258 (346)
.. .++.+.+||..+.+.+.++..+. -..++ +++..+++ +..++.|.++|..+.+ .+..+.- +. ..++.+
T Consensus 80 ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~v-Sdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeL 155 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYM-SDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNEL 155 (243)
T ss_dssp EESSSSEEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEE-ECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEE
T ss_pred EEeeCCEEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEE-ECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceee
Confidence 54 58999999999999888887444 34444 45553444 4557899999998743 4555442 22 234566
Q ss_pred EeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc-------------cccceeeEEEeCCC
Q 019059 259 CCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-------------DYEDSVYGLAWSSR 325 (346)
Q Consensus 259 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~ 325 (346)
.+. +| .+.+..-.+..|.+-|.++ ++.+..+. ......+.|+|+|+
T Consensus 156 e~~-~G-~lyanvw~s~~I~vIDp~t-------------------G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 156 EWV-NG-ELLANVWLTSRIARIDPAS-------------------GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEE-TT-EEEEEETTTTEEEEECTTT-------------------CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EEe-CC-EEEEEECCCCeEEEEECCC-------------------CCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 665 56 6565555677899999988 44433322 11234689999999
Q ss_pred CCcEEEEee
Q 019059 326 EPWIFASLS 334 (346)
Q Consensus 326 ~~~~l~s~~ 334 (346)
+++++++|-
T Consensus 215 ~~~lfVTGK 223 (243)
T 3mbr_X 215 HDRLFVTGK 223 (243)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEECC
Confidence 887777774
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.91 E-value=3.4e-06 Score=69.71 Aligned_cols=224 Identities=10% Similarity=-0.023 Sum_probs=130.4
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC--C
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE--E 143 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d--~ 143 (346)
.....++|.|++. |+.+ ....+.|..|+.+ ......+ ........+++.++++ ++++.... .
T Consensus 32 ~~pegia~~~~g~-lyv~---d~~~~~I~~~d~~----------g~~~~~~-~~~~~p~gia~~~dG~-l~vad~~~~~~ 95 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVT---NHEVGEIVSITPD----------GNQQIHA-TVEGKVSGLAFTSNGD-LVATGWNADSI 95 (306)
T ss_dssp CCEEEEEECTTSC-EEEE---ETTTTEEEEECTT----------CCEEEEE-ECSSEEEEEEECTTSC-EEEEEECTTSC
T ss_pred CCcceEEECCCCC-EEEE---eCCCCeEEEECCC----------CceEEEE-eCCCCceeEEEcCCCc-EEEEeccCCcc
Confidence 4567899999877 4443 2456788888865 1222222 2235688999999998 45544332 2
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCc-cce--------eeccc---
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGK-TNS--------IEHAH--- 210 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~-~~~--------~~~~~--- 210 (346)
.|..++..+++. ..+..... ......++..+++ .++++. .++.|+++|...++. +.. .....
T Consensus 96 ~v~~~d~~~g~~-~~~~~~~~---~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 96 PVVSLVKSDGTV-ETLLTLPD---AIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEEECTTSCE-EEEEECTT---CSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred eEEEEcCCCCeE-EEEEeCCC---ccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 466677665442 22221111 1123444544444 444444 578999999875421 100 00011
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc--ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCC
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA--PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 288 (346)
.+.+ +|++.+++++-...+.|..+|+..... ....+.. ......++++++| +++++....+.|.++|...
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G---- 242 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDR---- 242 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTTC----
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCCC----
Confidence 5666 778875777777788999999874121 1122211 1345678899999 7777776678899998653
Q ss_pred CCCcccccCCcccccccc--ccccccccceeeEEEeC---CCCCcEEEEee
Q 019059 289 ELPSESLVESPNQRANSL--LNSYSDYEDSVYGLAWS---SREPWIFASLS 334 (346)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~---~~~~~~l~s~~ 334 (346)
+. +..+...-..+++++|. |+++.++++..
T Consensus 243 ----------------~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 243 ----------------STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ----------------CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ----------------CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 32 22222222447899998 88775666554
No 246
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.90 E-value=1.8e-07 Score=86.15 Aligned_cols=185 Identities=10% Similarity=0.016 Sum_probs=114.7
Q ss_pred EEEeecCCCCcEEEEecCC-------------------eEEEEEcCCCCCCceeeecccCC----CceeeEEEEeCCCCC
Q 019059 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSG----MLHYLSGGAWDPHDV 181 (346)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~ 181 (346)
.++++|++. +++++..++ .|..+|.++++............ ....+.......+++
T Consensus 239 ~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 577888776 355554444 49999999988766655432110 011111111122444
Q ss_pred ---cEEEEecCCeEEEEEccCCCccceeeccc-----------------------------------------eeEEEeC
Q 019059 182 ---NAVAATCESSVQFWDLRSMGKTNSIEHAH-----------------------------------------VRNVDYD 217 (346)
Q Consensus 182 ---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----------------------------------------v~~~~~~ 217 (346)
.++.++.+|.++++|.++++.+....... -..++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 57778889999999999998763221100 1236888
Q ss_pred CCCCcEEEEecC---------------------------------------------CCeEEEEEcccCCcceeeecCCC
Q 019059 218 TKKKHLLVTAAD---------------------------------------------ESGIHLWDLRMLKAPIQELPGHT 252 (346)
Q Consensus 218 ~~~~~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~ 252 (346)
|+.. ++++... +|.|+.||+.+ ++.+-.+..+.
T Consensus 398 p~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~ 475 (689)
T 1yiq_A 398 PDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT 475 (689)
T ss_dssp TTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS
T ss_pred CCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC
Confidence 8877 5555421 37799999987 44555554333
Q ss_pred cceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccce-eeEEEeCCCCCcEEE
Q 019059 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDS-VYGLAWSSREPWIFA 331 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~ 331 (346)
++..-.+...+ .+++.++.|+.|+.||.++ ++.+..+...... ..-+.|..+|+.+++
T Consensus 476 -~~~~g~~~tag-glvf~gt~dg~l~a~D~~t-------------------G~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 -IFNGGTLSTAG-NLVFEGSADGRVIAYAADT-------------------GEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp -SCCCCEEEETT-TEEEEECTTSEEEEEETTT-------------------CCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred -CccCccceECC-CEEEEECCCCcEEEEECCC-------------------CccceeeeCCCCcccCceEEEECCEEEEE
Confidence 23333455566 7888999999999999999 8888766543321 234667778874555
Q ss_pred Ee
Q 019059 332 SL 333 (346)
Q Consensus 332 s~ 333 (346)
..
T Consensus 535 ~~ 536 (689)
T 1yiq_A 535 FM 536 (689)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=7.9e-08 Score=88.29 Aligned_cols=231 Identities=10% Similarity=0.018 Sum_probs=139.8
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeecc-C----CceEEEEeecCCCCcEEEEec------CCeE
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH-V----GKINCVLWWSSGRHDKLVSID------EENI 145 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~-~----~~i~~~~~~~~~~~~~~~~~~------d~~i 145 (346)
+..++++ ..|+.|..+|.. +++.+-.+..+ . ..+.+.-...++. +++++. ++.|
T Consensus 128 ~~~v~v~----~~dg~l~alD~~---------tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~--v~v~~~~~~~~~~g~v 192 (677)
T 1kb0_A 128 KGKVYVG----AWDGRLIALDAA---------TGKEVWHQNTFEGQKGSLTITGAPRVFKGK--VIIGNGGAEYGVRGYI 192 (677)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEETTTTCCSSCBCCSCCEEETTE--EEECCBCTTTCCBCEE
T ss_pred CCEEEEE----cCCCEEEEEECC---------CCCEEeeecCCcCcCcCcccccCcEEECCE--EEEEecccccCCCCEE
Confidence 4556654 578899999987 56665555433 1 1121111112333 555432 6899
Q ss_pred EEEEcCCCCCCceeeecccC---------------------------CCceeeEEEEeCCCCCcEEEEecCC--------
Q 019059 146 FLWSLDCSNKNAQVQSKQSS---------------------------GMLHYLSGGAWDPHDVNAVAATCES-------- 190 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~~---------------------------~~~~~v~~~~~~~~~~~l~~~~~d~-------- 190 (346)
+.+|..+++...+....... +.......++++|++..++++..++
T Consensus 193 ~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 193 TAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVR 272 (677)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCC
Confidence 99999988866655432211 0000113567888888888877553
Q ss_pred -----------eEEEEEccCCCccceeeccc-----------eeEEEeCCCCC--cEEEEecCCCeEEEEEcccCCccee
Q 019059 191 -----------SVQFWDLRSMGKTNSIEHAH-----------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPIQ 246 (346)
Q Consensus 191 -----------~i~i~d~~~~~~~~~~~~~~-----------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (346)
.|..+|.++++.+-.++..+ ..-+....+|+ ..++.++.+|.++++|.++ ++++.
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~ 351 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFIS 351 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEE
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEec
Confidence 59999999999776655221 11222223552 2788899999999999987 44444
Q ss_pred eecCCC-----------cce------------------------EEEEeCCCCCcEEEEecCC-----------------
Q 019059 247 ELPGHT-----------HWT------------------------WAVCCNPEYDGFILSAGTD----------------- 274 (346)
Q Consensus 247 ~~~~~~-----------~~v------------------------~~v~~~~~~~~~l~s~~~d----------------- 274 (346)
.+.... .++ ..++++|+. .++++...+
T Consensus 352 ~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 352 AKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEEEEECCCEEEECTTCCTTCCC
T ss_pred cccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEeChhcceeeeccccccccccc
Confidence 332110 001 146788887 677665432
Q ss_pred --------------------------CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCc
Q 019059 275 --------------------------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (346)
Q Consensus 275 --------------------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (346)
+.|..||+.+ ++.+-.+. +..++.+..+...+.
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-------------------G~~~W~~~-~~~~~~~g~~~~~g~- 489 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-------------------QKAAWSVE-HVSPWNGGTLTTAGN- 489 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-------------------TEEEEEEE-ESSSCCCCEEEETTT-
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCCC-------------------CcEEeecC-CCCCCcCcceEeCCC-
Confidence 5677777776 55554443 222344455556666
Q ss_pred EEEEeecCCeEEEeeec
Q 019059 329 IFASLSYDGRVRNHMLE 345 (346)
Q Consensus 329 ~l~s~~~d~~v~vw~~~ 345 (346)
+++.++.|+.+++||++
T Consensus 490 ~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEECTTSEEEEEETT
T ss_pred EEEEECCCCcEEEEECC
Confidence 67778999999999975
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.88 E-value=3.1e-06 Score=72.32 Aligned_cols=230 Identities=9% Similarity=-0.012 Sum_probs=136.6
Q ss_pred EeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEE
Q 019059 70 DLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS 149 (346)
Q Consensus 70 ~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd 149 (346)
|.+..+ ...|+.+ ....|+..++. .... ..+.........++|.+.+..++++-...+.|..++
T Consensus 81 C~~~~~-~~~l~~~-----~~~~I~~i~~~---------~~~~-~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~ 144 (386)
T 3v65_B 81 CKALGP-EPVLLFA-----NRIDIRQVLPH---------RSEY-TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRAN 144 (386)
T ss_dssp EEECSS-CCEEEEE-----CBSCEEEECTT---------SCCC-EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ECCccc-cceeEee-----cCccceeeccC---------CCcE-EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 444444 4455553 44567777775 2222 222223445789999987776555556678999999
Q ss_pred cCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEE
Q 019059 150 LDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVT 226 (346)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~ 226 (346)
++... ...+.... .....++++.+.+..|+.+. ..+.|.+.++........+... . ...++++|.+..++++
T Consensus 145 ~~g~~-~~~~~~~~----~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 145 LNGSN-VEEVVSTG----LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp TTSCC-EEEEECSS----CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred cCCCC-cEEEEeCC----CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEe
Confidence 87543 22222111 12456788887666666654 4678988888754433323222 2 8999999977756666
Q ss_pred ecCC-CeEEEEEcccCCcceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccc
Q 019059 227 AADE-SGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRAN 304 (346)
Q Consensus 227 ~~~d-g~i~i~d~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 304 (346)
-... +.|..+++.. . ....+ ...-...+.|+++|++..+.++-+..+.|..+|+.. .
T Consensus 220 d~~~~~~I~r~~~dG-~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG-------------------~ 278 (386)
T 3v65_B 220 DWGNTPRIEASSMDG-S-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-------------------S 278 (386)
T ss_dssp ECSSSCEEEEEETTS-C-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS-------------------C
T ss_pred ccCCCCEEEEEeCCC-C-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-------------------C
Confidence 5555 7888888764 2 22232 223445789999987735555656677899998864 1
Q ss_pred ccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 305 SLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 305 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
.....+.........|++. .+ .++++-...+.|..++
T Consensus 279 ~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 279 HRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSAN 315 (386)
T ss_dssp SCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEE
T ss_pred eeEEEEECCCCCceEEEEE-CC-EEEEeeCCCCeEEEEE
Confidence 1111111112235667773 33 3666666677777665
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=6.4e-07 Score=70.11 Aligned_cols=185 Identities=10% Similarity=0.027 Sum_probs=122.0
Q ss_pred ccc--cceEEeeecCCCCceEEEEeecCCc--ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEE
Q 019059 63 SHP--NEIWDLSSCPFDQRIFSTVFSTGES--YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 63 ~h~--~~v~~~~~~~~~~~l~~~~~~~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
.|. .-...+.|++ + .|..+. |.. ..|+++|+. +++.+..+.... ..........+..++.+
T Consensus 16 phd~~~ftqGL~~~~-~-~Lyest---G~~g~S~v~~vD~~---------tgkv~~~~~l~~-~~fgeGi~~~~~~ly~l 80 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-G-HLYEST---GETGRSSVRKVDLE---------TGRILQRAEVPP-PYFGAGIVAWRDRLIQL 80 (243)
T ss_dssp ECCTTCCEEEEEEET-T-EEEEEE---CCTTSCEEEEEETT---------TCCEEEEEECCT-TCCEEEEEEETTEEEEE
T ss_pred CCCCccccccEEEEC-C-EEEEEC---CCCCCceEEEEECC---------CCCEEEEEeCCC-CcceeEEEEeCCEEEEE
Confidence 555 3466899986 3 454442 443 489999998 677777664332 33444444456666666
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeecc-------ce
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHA-------HV 211 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~v 211 (346)
.-.++.+.++|..+.+...++.... .-..++ +++..|+++..++.|.++|..+.+....+... .+
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~~------~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~l 152 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYPG------EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNL 152 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECSS------CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EeeCCEEEEEECCcCcEEEEEeCCC------CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccc
Confidence 6678999999998766544443321 223444 46788888877899999999999887776632 16
Q ss_pred eEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC-------------CCcceEEEEeCCCCCcEEEEecC
Q 019059 212 RNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG-------------HTHWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 212 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~v~~v~~~~~~~~~l~s~~~ 273 (346)
+.+.|. +|. +++..-.+..|.+.|.++ .+.+..+.. -..-.+.|+++|++.+++++|-.
T Consensus 153 NeLe~~-~G~-lyanvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 153 NELEWV-NGE-LLANVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEEE-TTE-EEEEETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred eeeEEe-CCE-EEEEECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 777776 565 666665677999999987 444444331 12356899999988566666643
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.86 E-value=2.8e-06 Score=67.44 Aligned_cols=201 Identities=7% Similarity=0.052 Sum_probs=124.5
Q ss_pred eeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEE
Q 019059 116 LDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFW 195 (346)
Q Consensus 116 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 195 (346)
+.+-...+..++|+|++..++++...++.|...|.. ++....+.... .....++++.+++.++++.-.++.+.++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g----~~D~EGIa~~~~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF----VKDLETIEYIGDNQFVISDERDYAIYVI 96 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS----CSSEEEEEECSTTEEEEEETTTTEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC----CCChHHeEEeCCCEEEEEECCCCcEEEE
Confidence 444556799999999877656666668888888886 44322222111 1367888998887755554467889999
Q ss_pred EccCCCcc---ceeec-----c-c--eeEEEeCCCCCcEEEEecCCCeEEEEEccc--CCcceeeec-------CCCcce
Q 019059 196 DLRSMGKT---NSIEH-----A-H--VRNVDYDTKKKHLLVTAADESGIHLWDLRM--LKAPIQELP-------GHTHWT 255 (346)
Q Consensus 196 d~~~~~~~---~~~~~-----~-~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~-------~~~~~v 255 (346)
++.....+ ..... . . ...++|+|.+. .|+++.+.....+|.++. ....+..+. .+...+
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 88755421 11110 1 1 68999999987 444454444445554431 111122221 123467
Q ss_pred EEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccc--cc-cc------cceeeEEEeCCCC
Q 019059 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS--YS-DY------EDSVYGLAWSSRE 326 (346)
Q Consensus 256 ~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~------~~~v~~~~~~~~~ 326 (346)
.+++++|...++++.......|.++|... +.+.. +. +. -...-.|+|.++|
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g--------------------~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVG--------------------EVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTC--------------------CEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCC--------------------CEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 89999998756777777788899999875 33222 22 11 1246889999999
Q ss_pred CcEEEEeecCCeEEEeee
Q 019059 327 PWIFASLSYDGRVRNHML 344 (346)
Q Consensus 327 ~~~l~s~~~d~~v~vw~~ 344 (346)
. ++++ ++.+.++.+.-
T Consensus 236 ~-lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 236 N-IYIV-SEPNRFYRFTP 251 (255)
T ss_dssp C-EEEE-ETTTEEEEEEC
T ss_pred C-EEEE-cCCceEEEEEe
Confidence 6 5555 66676666643
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.86 E-value=7.1e-06 Score=69.04 Aligned_cols=201 Identities=8% Similarity=-0.053 Sum_probs=126.9
Q ss_pred cccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 143 (346)
....+.+++|.+.+..|..+ ....+.|..++++ .......+.........+++.+.+..++++-...+
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~---D~~~~~I~r~~~~---------g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~ 138 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWS---DVTLDRILRANLN---------GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 138 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEE---ETTTTEEEEEETT---------SCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEEeccccEEEEE---eccCCceEEEecC---------CCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCC
Confidence 34557899999887777765 3456788888876 21211222222334578888876665555556678
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec-C-CeEEEEEccCCCccceeecc-c-eeEEEeCCC
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-E-SSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTK 219 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~ 219 (346)
.|.+.+++... ...+... ......+++++|.+..|+.+.. . +.|..+++........+... . .+.|+++|+
T Consensus 139 ~I~~~~~dG~~-~~~l~~~----~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 139 RIEVANLDGAH-RKVLLWQ----SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp EEEEEETTSCS-CEEEECT----TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETT
T ss_pred eEEEEcCCCCc-eEEEEeC----CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCC
Confidence 99999987433 2222211 1225688999997777776653 4 78988888754332222211 2 899999987
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+..++++-...+.|..+|+.. ......+.........+++. .+ .++++-...+.|..++..+
T Consensus 214 ~~~lY~aD~~~~~I~~~~~dG-~~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~ 275 (349)
T 3v64_C 214 GRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFT 275 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTT
T ss_pred CCEEEEEECCCCEEEEEeCCC-CceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccC
Confidence 775777767778999999874 22222232233455677773 44 5666666678888887544
No 252
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.85 E-value=2.8e-06 Score=72.60 Aligned_cols=200 Identities=9% Similarity=-0.056 Sum_probs=126.7
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCe
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 144 (346)
...+..++|.+.+..|+.+ ....+.|..++++ .......+.........+++.+.+..++++-...+.
T Consensus 115 ~~~~~gl~~d~~~~~ly~~---D~~~~~I~r~~~~---------g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~ 182 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWS---DVTLDRILRANLN---------GSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR 182 (386)
T ss_dssp CSCEEEEEEETTTTEEEEE---ETTTTEEEEEETT---------SCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTE
T ss_pred CCccEEEEEecCCCeEEEE---eCCCCcEEEEecC---------CCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCe
Confidence 3567899999877777765 3456788888876 222222222223345678888776655555566788
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec-C-CeEEEEEccCCCccceeecc-c-eeEEEeCCCC
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-E-SSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKK 220 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~ 220 (346)
|.+.+++... ...+... ......++++.|.+..|+.+.. . +.|..+++............ . .+.|+++|++
T Consensus 183 I~~~~~dg~~-~~~l~~~----~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~ 257 (386)
T 3v65_B 183 IEVANLDGAH-RKVLLWQ----SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 257 (386)
T ss_dssp EEECBTTSCS-CEEEECS----SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGG
T ss_pred EEEEeCCCCc-eEEeecC----CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCC
Confidence 9888886432 2222211 1235688999998777776653 3 68888888754333222211 2 8999999877
Q ss_pred CcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 221 KHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
..++++-...+.|..+|+.. ......+.........+++ ..+ .++++-...+.|..++..+
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~-~ly~td~~~~~V~~~~~~~ 318 (386)
T 3v65_B 258 RRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FED-SLYWTDWHTKSINSANKFT 318 (386)
T ss_dssp TEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETT-EEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECC-EEEEeeCCCCeEEEEECCC
Confidence 75777777778999999874 2222223323345577777 344 6666766778888888544
No 253
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=3.4e-06 Score=73.10 Aligned_cols=257 Identities=10% Similarity=0.095 Sum_probs=137.4
Q ss_pred ceEEeeecC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC--
Q 019059 67 EIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE-- 143 (346)
Q Consensus 67 ~v~~~~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~-- 143 (346)
....++++| ++..|.++- ..+.|+.+|++ ... +..+.........++|+++++.++++...++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d----~~~~I~~id~~---------~~~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVG----EQHPTRLIDFE---------KEY-VSTVYSGLSKVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCCEEEEETTEEEEEEEEE----BTEEEEEEETT---------TTE-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCCEEEECCCCCCeEEEEe----CCCcEEEEECC---------CCE-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcc
Confidence 446788998 466666652 22788888876 222 2333334456789999999986455543222
Q ss_pred --eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc--c-eeEEEeC
Q 019059 144 --NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA--H-VRNVDYD 217 (346)
Q Consensus 144 --~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~--~-v~~~~~~ 217 (346)
.+.+.+............ . ......++++|++..|+++. .++.|..+|...+........+ . ...++|+
T Consensus 204 ~~~v~~~~~~g~~~~~~~l~-~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~ 278 (430)
T 3tc9_A 204 RPNNYILTRESGFKVITELT-K----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFH 278 (430)
T ss_dssp SEEEEEEEGGGTSCSEEEEE-E----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEEC
T ss_pred cceEEEEeCCCceeeeeeec-c----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEc
Confidence 344444332211111111 1 12467788999444455544 6789999998866532222211 2 8899999
Q ss_pred CCCCcEEEEecCCCeEEEEEcccCCcc---eeeecCC---------------CcceE-EEEeC--------CCCCcEEEE
Q 019059 218 TKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGH---------------THWTW-AVCCN--------PEYDGFILS 270 (346)
Q Consensus 218 ~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---------------~~~v~-~v~~~--------~~~~~~l~s 270 (346)
|+++.++++-...+.|..++....... +..+.+. -.... .+... +++ .+.++
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyva 357 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFC 357 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEE
T ss_pred CCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEE
Confidence 999856666667789999887632111 1122111 01122 34442 345 55555
Q ss_pred ecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 271 AGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 271 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
-...+.|+.++..- ..............-...+... ....-.....|+++|++..++++-....+|+.++++.
T Consensus 358 D~~n~~I~~i~~~G-~v~~~~g~g~~~~~G~~dG~~~--~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 430 (430)
T 3tc9_A 358 DRENHCIRILTPQG-RVTTFAGRGSNGTSGYNDGDLR--QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE 430 (430)
T ss_dssp EGGGTEEEEECTTS-EEEEEEECCTTSSSSCBCEETT--TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred ECCCcEEEEECCCC-cEEEEEeCCCCCCCcccCCCch--hhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccCC
Confidence 55567788777321 0000000000000000000000 0001124689999995334888877888999998874
No 254
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.82 E-value=4.6e-06 Score=70.98 Aligned_cols=222 Identities=10% Similarity=-0.011 Sum_probs=127.1
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCce-----EEEEeecCCCCcEEEEecCCeEEEEEcC
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKI-----NCVLWWSSGRHDKLVSIDEENIFLWSLD 151 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~~~~d~~i~vwd~~ 151 (346)
+..+++. ..++.|..+|.. +++.+-......... ...... ++. ++++..++.+..+|..
T Consensus 143 ~~~v~v~----~~~g~l~~~d~~---------tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~--v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 143 DGLVLIH----TSNGQLQALNEA---------DGAVKWTVNLDMPSLSLRGESAPTTA-FGA--AVVGGDNGRVSAVLME 206 (376)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEECCC-----CCCCCCEEE-TTE--EEECCTTTEEEEEETT
T ss_pred CCEEEEE----cCCCeEEEEECC---------CCcEEEEEeCCCCceeecCCCCcEEE-CCE--EEEEcCCCEEEEEECC
Confidence 3355553 578889999987 455544443221110 111222 333 6667778999999998
Q ss_pred CCCCCceeeecccCCCc--eeeEEEEeCC--CCCcEEEEecCCeEEEEEccCCCccceeeccceeEEEeCCCCCcEEEEe
Q 019059 152 CSNKNAQVQSKQSSGML--HYLSGGAWDP--HDVNAVAATCESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 152 ~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 227 (346)
+++...........+.. ..+..+.-.| .+..+++++.++.+..+|.++++............+... +. .++.+
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~-~l~~~ 283 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD--GN-RIYLV 283 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE--TT-EEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE--CC-EEEEE
Confidence 87755444322111000 0000011111 246677888899999999999987765543334444443 33 56677
Q ss_pred cCCCeEEEEEcccCCcceeeecC-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccc
Q 019059 228 ADESGIHLWDLRMLKAPIQELPG-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL 306 (346)
Q Consensus 228 ~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (346)
+.++.+..+|.++. +.+..... ....+...... + ..|+.++.+|.|.++|..+ ++.
T Consensus 284 ~~~g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~t-------------------G~~ 340 (376)
T 3q7m_A 284 DQNDRVMALTIDGG-VTLWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVED-------------------GRF 340 (376)
T ss_dssp ETTCCEEEEETTTC-CEEEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTT-------------------CCE
T ss_pred cCCCeEEEEECCCC-cEEEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCC-------------------CcE
Confidence 78899999999874 34443331 12222223332 3 5688888899999999998 666
Q ss_pred ccccccccceeeE-EEeCCCCCcEEEEeecCCeEEEee
Q 019059 307 LNSYSDYEDSVYG-LAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 307 ~~~~~~~~~~v~~-~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
+.........+.. ... .++ .|..++.+|.|+.|+
T Consensus 341 ~~~~~~~~~~~~~~~~~-~~~--~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 341 VAQQKVDSSGFQTEPVA-ADG--KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEECCTTCBCSCCEE-ETT--EEEEEBTTSCEEEEE
T ss_pred EEEEecCCCcceeCCEE-ECC--EEEEEeCCCEEEEEe
Confidence 5544432222222 222 233 567788899999886
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.81 E-value=1.4e-05 Score=63.46 Aligned_cols=205 Identities=12% Similarity=0.121 Sum_probs=130.4
Q ss_pred eeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec-cCCceEEEEeecCCCCcEEE
Q 019059 60 GLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 60 ~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 138 (346)
.+.+-.+.+..++|.|++..|+++. ..++.|...|.. ++.++.+.. -....-.+++.+++. ++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~---d~~~~I~~ld~~----------g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs 86 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTI---NKPAAIVEMTTN----------GDLIRTIPLDFVKDLETIEYIGDNQ-FVIS 86 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEE---ETTEEEEEEETT----------CCEEEEEECSSCSSEEEEEECSTTE-EEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEE---CCCCeEEEEeCC----------CCEEEEEecCCCCChHHeEEeCCCE-EEEE
Confidence 4445557899999999988888863 456777777764 445555432 124677889988876 3444
Q ss_pred EecCCeEEEEEcCCCCCCceeeecc----cCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC---CCccceeec---
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQ----SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS---MGKTNSIEH--- 208 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~~--- 208 (346)
.-.++.+.++++............. .........+++|+|.+..|+++.......+|.+.. ...+..+..
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHH
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhh
Confidence 4456889999987654311111111 112344679999999998888887654445554431 111111110
Q ss_pred ---c---ceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCC---------cceEEEEeCCCCCcEEEEecC
Q 019059 209 ---A---HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHT---------HWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 209 ---~---~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---------~~v~~v~~~~~~~~~l~s~~~ 273 (346)
. .+.+++++|....+++.......+..+|.. ++++..+.-.. .....|+|.++| ++.+ .++
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~lyI-vsE 242 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-NIYI-VSE 242 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-CEEE-EET
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCC-CEEE-EcC
Confidence 1 178999999888788888888899999976 33444443221 256889999999 6444 466
Q ss_pred CCeEEEEec
Q 019059 274 DSTVNLWLV 282 (346)
Q Consensus 274 d~~i~iwd~ 282 (346)
-+.++.+..
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 666666644
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.81 E-value=2.1e-05 Score=65.16 Aligned_cols=221 Identities=11% Similarity=0.030 Sum_probs=130.0
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCC---CCCceeeecccC
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS---NKNAQVQSKQSS 165 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~ 165 (346)
....|+..+++ ..+....+ ........++|++.+..++++-...+.|..+++... .....+...
T Consensus 8 ~~~~I~~i~~~---------~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~--- 74 (316)
T 1ijq_A 8 NRHEVRKMTLD---------RSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 74 (316)
T ss_dssp CBSSEEEEETT---------SCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---
T ss_pred CCCeEEEEECC---------CcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC---
Confidence 44578888887 22222223 234567899999887765666566789999998751 212222211
Q ss_pred CCceeeEEEEeCCCCCcEEEE-ecCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCC-CeEEEEEcccC
Q 019059 166 GMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRML 241 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 241 (346)
......++++.+.+..|+.+ ...+.|.++|+........+... . ...++++|.+..++++.... +.|..+++.-
T Consensus 75 -~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG- 152 (316)
T 1ijq_A 75 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 152 (316)
T ss_dssp -SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred -CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-
Confidence 11245788888766666655 45789999998754332222212 2 89999999776466665443 6888888763
Q ss_pred Ccceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 242 KAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 242 ~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
.....+ ...-...+.++++|++..+.++-+..+.|..+|+.... .+.+......-.....+
T Consensus 153 -~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-----------------~~~~~~~~~~~~~P~gi 214 (316)
T 1ijq_A 153 -VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-----------------RKTILEDEKRLAHPFSL 214 (316)
T ss_dssp -CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------CEEEEECTTTTSSEEEE
T ss_pred -CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-----------------eEEEeecCCccCCcEEE
Confidence 223333 22335678999998873555555667799999987400 11111111111224566
Q ss_pred EeCCCCCcEEEEeecCCeEEEeee
Q 019059 321 AWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
++.. + .++++-...+.|..++.
T Consensus 215 av~~-~-~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 215 AVFE-D-KVFWTDIINEAIFSANR 236 (316)
T ss_dssp EEET-T-EEEEEETTTTEEEEEET
T ss_pred EEEC-C-EEEEEECCCCeEEEEeC
Confidence 6643 3 46666666777777663
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.80 E-value=1.7e-06 Score=80.60 Aligned_cols=193 Identities=11% Similarity=-0.007 Sum_probs=113.6
Q ss_pred ceEEEEee-cCCCCcEEEEecCC----eEEEEEcCCC-CCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----C
Q 019059 122 KINCVLWW-SSGRHDKLVSIDEE----NIFLWSLDCS-NKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----S 190 (346)
Q Consensus 122 ~i~~~~~~-~~~~~~~~~~~~d~----~i~vwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~ 190 (346)
.+...+|| |||+.++++...+| .|+++|+.++ +...... ......++|+||++.|+....+ .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-------~~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-------SGTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-------EEECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-------cCceeeEEEecCCCEEEEEEECCCCCCC
Confidence 67889999 99997555554333 4999999887 5221111 1124578999999988887754 3
Q ss_pred eEEEEEccCCCcc--ceeecc--c-eeEEEeCCCCCcEEEEecC--CCeEEEEEcccCCcce--eeec-CCCcceEEEEe
Q 019059 191 SVQFWDLRSMGKT--NSIEHA--H-VRNVDYDTKKKHLLVTAAD--ESGIHLWDLRMLKAPI--QELP-GHTHWTWAVCC 260 (346)
Q Consensus 191 ~i~i~d~~~~~~~--~~~~~~--~-v~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~--~~~~-~~~~~v~~v~~ 260 (346)
.|+++++.+++.. ..+... . ...+.|+|++++++++... ...|.++|+....... ..+. .......++.|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 6888888876532 222211 2 6788999999955555433 3468888887632122 3333 23345555655
Q ss_pred CCCCCcEEEEecCC--C--eEEEEecCCCCCCCCCcccccCCccccccccccc-ccccc--ceeeEEEeCCCCCcEEEEe
Q 019059 261 NPEYDGFILSAGTD--S--TVNLWLVSTSNHDELPSESLVESPNQRANSLLNS-YSDYE--DSVYGLAWSSREPWIFASL 333 (346)
Q Consensus 261 ~~~~~~~l~s~~~d--~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~v~~~~~~~~~~~~l~s~ 333 (346)
+..+ .+++....+ + .|..+|+.. ...... +..+. ..+.++.+. +..++++.
T Consensus 328 ~~g~-~l~~~t~~~~a~~~~L~~~d~~~-------------------~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~ 385 (751)
T 2xe4_A 328 HGTS-HLVILTNEGGAVNHKLLIAPRGQ-------------------PSDWSHVLVDHSEDVFMESIAVR--SNYLVVAG 385 (751)
T ss_dssp ETTT-EEEEEECTTTCTTCEEEEEETTS-------------------TTCCCCEEECCCSSEEEEEEEEC--SSEEEEEE
T ss_pred eeCC-EEEEEeCCCCCCCcEEEEEcCCC-------------------cccceeeEECCCCCcEEEEEEEE--CCEEEEEE
Confidence 5444 555555444 3 566666553 111111 11122 135566665 44578888
Q ss_pred ecCCeEEEee
Q 019059 334 SYDGRVRNHM 343 (346)
Q Consensus 334 ~~d~~v~vw~ 343 (346)
..++..++|-
T Consensus 386 ~~~g~~~l~~ 395 (751)
T 2xe4_A 386 RRAGLTRIWT 395 (751)
T ss_dssp EETTEEEEEE
T ss_pred EeCCEEEEEE
Confidence 8888766553
No 258
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.77 E-value=1.6e-07 Score=78.46 Aligned_cols=165 Identities=4% Similarity=-0.108 Sum_probs=98.3
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
..++.|..|| . +++.+.........+.++...+++. +.+++.+ |..+|. +++.........
T Consensus 37 t~~~~l~~~d-~---------~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~--l~~~d~-~g~~~~~~~~~~---- 97 (330)
T 3hxj_A 37 SSNKNLYAIN-T---------DGSVKWFFKSGEIIECRPSIGKDGT--IYFGSDK--VYAINP-DGTEKWRFDTKK---- 97 (330)
T ss_dssp STTTTTEEEC-T---------TSCEEESSCGGGEEEECCEETTTTE--ECCSSCE--EEEECC-CGGGGGGSCC------
T ss_pred cCCCEEEEEC-C---------CCcEEEEEecCCCcccceEEecCCc--EEEecCc--EEEECC-CCcEEEEEECCC----
Confidence 4577788888 5 3444444433444556677766766 5555433 888875 333322222111
Q ss_pred ceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc--eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcce
Q 019059 168 LHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
.......+. +..+.+++.++.|..+|.. ++......... +.++...+++. +..++.++.+..+|.. ...+
T Consensus 98 -~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~--g~~~ 169 (330)
T 3hxj_A 98 -AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD--GTEK 169 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT--SCEE
T ss_pred -CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC--CCEe
Confidence 011222222 4567778888999999988 66554444333 66777777775 5556777899999987 3344
Q ss_pred eeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 246 QELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 246 ~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
..+......+.++...+++ .+++ ++ +.|..+| ..
T Consensus 170 ~~~~~~~~~~~~~~~d~~g-~l~v-~t--~~l~~~d-~~ 203 (330)
T 3hxj_A 170 WRFKTNDAITSAASIGKDG-TIYF-GS--DKVYAIN-PD 203 (330)
T ss_dssp EEEECSSCCCSCCEECTTC-CEEE-ES--SSEEEEC-TT
T ss_pred EEEecCCCceeeeEEcCCC-EEEE-Ee--CEEEEEC-CC
Confidence 4555445567777777777 5444 44 6788888 44
No 259
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.73 E-value=5.2e-05 Score=61.41 Aligned_cols=271 Identities=11% Similarity=0.130 Sum_probs=162.3
Q ss_pred CcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCC
Q 019059 27 DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (346)
Q Consensus 27 ~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (346)
++.++++-.-..+..+++.++++...+.... .-.. --+.-.+|..+.++.- ....++++|++
T Consensus 34 ESDkyicVrE~~~~~~~VvIiDl~n~~~~~R--rpi~----AdsAIMnP~~~ViALr-----ag~~LQiFnle------- 95 (365)
T 2xzh_A 34 ESDKFICIREKVGEQAQVVIIDMNDPSNPIR--RPIS----ADSAIMNPASKVIALK-----AGKTLQIFNIE------- 95 (365)
T ss_dssp EETTEEEEEEEETTEEEEEEEETTSTTSCEE--EECC----CSEEEECSSSSEEEEE-----ETTEEEEEETT-------
T ss_pred ecCceEEEEecCCCCCEEEEEECCCCCCccc--cccc----cceeeeCCCccEEEEe-----cCCeEEEechH-------
Confidence 3455555544455566888888888655322 2111 2234458866544443 35689999998
Q ss_pred CccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEE
Q 019059 107 SPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (346)
....+..+.- .+.|.--.|-.+.. +.+++ +..|+-|+++....+.+.......-....|..-..+++.++++..
T Consensus 96 --tK~klks~~~-~e~VvfWkWis~~~-L~lVT--~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 169 (365)
T 2xzh_A 96 --MKSKMKAHTM-TDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 169 (365)
T ss_dssp --TTEEEEEEEC-SSCEEEEEECSSSE-EEEEE--SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEE
T ss_pred --Hhhhhcceec-CCccEEEEecCCCe-EEEEc--CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEE
Confidence 5555555533 56788889987766 34444 689999999876656666554432234577777889999987765
Q ss_pred ec-------CCeEEEEEccCCCccceeeccc-eeEEEeCCCC----CcEEEEecC---CCeEEEEEcccC--Ccc-----
Q 019059 187 TC-------ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKK----KHLLVTAAD---ESGIHLWDLRML--KAP----- 244 (346)
Q Consensus 187 ~~-------d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~----~~~l~~~~~---dg~i~i~d~~~~--~~~----- 244 (346)
+- .|.+.+|..+.+. .+...+| ..-..+-.+| ..+++.+.. .+.+++.++... +.+
T Consensus 170 GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk 247 (365)
T 2xzh_A 170 GISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 247 (365)
T ss_dssp EEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCE
T ss_pred eEeccCCccceeEEEEeecccc--cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccc
Confidence 52 3678888877432 3333477 2222332222 223443332 258999998543 111
Q ss_pred -eeeecC---CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 245 -IQELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 245 -~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
+..+.. ...-.-++..++.. ..++.-+.-|.|++||+.+ +.++..-.-....|..-
T Consensus 248 ~vdi~fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleT-------------------gt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 248 AVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET-------------------GTCIYMNRISGETIFVT 307 (365)
T ss_dssp EEEECCCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEE
T ss_pred cceeeCCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEccc-------------------CcEEEEeccCCCceEEe
Confidence 111111 12334567777777 7888889999999999999 88887766655656544
Q ss_pred EeCCCCCcEEEEeecCCeEEEeee
Q 019059 321 AWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
+-+..... ++.....|.|.--.+
T Consensus 308 a~~~~~~G-i~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 308 APHEATAG-IIGVNRKGQVLSVCV 330 (365)
T ss_dssp EEEGGGTE-EEEEETTCEEEEEEE
T ss_pred cccCCCCc-EEEEcCCCEEEEEEE
Confidence 44433222 334446666654443
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.73 E-value=3.9e-05 Score=63.57 Aligned_cols=222 Identities=9% Similarity=-0.046 Sum_probs=134.3
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCC
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG 121 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (346)
+.|..+++....... +......+.+++|.+.++.|+.+ ....+.|..+++..... . ......+...-.
T Consensus 10 ~~I~~i~~~~~~~~~----~~~~~~~p~g~~~d~~~~~ly~~---D~~~~~I~~~~~~g~~~----~-~~~~~~~~~~~~ 77 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTS----LIPNLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG----V-SSYDTVISRDIQ 77 (316)
T ss_dssp SSEEEEETTSCCCEE----EECSCSSEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSSCS
T ss_pred CeEEEEECCCcceEe----hhcCCCceEEEEEEeCCCEEEEE---ECCCCcEEEEECCCCCC----C-cccEEEEeCCCC
Confidence 456667666543221 22234567899999987777776 35567888888761000 0 111112222223
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC--CeEEEEEccC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE--SSVQFWDLRS 199 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~d~~~ 199 (346)
....+++.+.+..++++-...+.|.+.+++... ...+.... .....+++++|.+..|+.+... +.|...++..
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~----~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECT----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECC----CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 457888887666555555667899999987432 22222211 2256889999977777766542 6888888764
Q ss_pred CCccceeecc--c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec---CCCcceEEEEeCCCCCcEEEEecC
Q 019059 200 MGKTNSIEHA--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP---GHTHWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 200 ~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~l~s~~~ 273 (346)
. ....+... . .+.+++++++..++++-...+.|..+|+.. . ..+.+. ........+++. .+ .++++-..
T Consensus 153 ~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~-~~~~~~~~~~~~~~P~giav~-~~-~ly~~d~~ 227 (316)
T 1ijq_A 153 V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVF-ED-KVFWTDII 227 (316)
T ss_dssp C-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-SCEEEEECTTTTSSEEEEEEE-TT-EEEEEETT
T ss_pred C-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-C-ceEEEeecCCccCCcEEEEEE-CC-EEEEEECC
Confidence 3 33333211 2 899999988775667766778999999874 2 222222 112345677774 34 66667777
Q ss_pred CCeEEEEecCCC
Q 019059 274 DSTVNLWLVSTS 285 (346)
Q Consensus 274 d~~i~iwd~~~~ 285 (346)
.+.|..++..++
T Consensus 228 ~~~V~~~~~~~g 239 (316)
T 1ijq_A 228 NEAIFSANRLTG 239 (316)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEeCCCC
Confidence 789999987654
No 261
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.72 E-value=3.5e-05 Score=63.86 Aligned_cols=221 Identities=8% Similarity=-0.052 Sum_probs=129.6
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCc
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 168 (346)
....|+..+++.. .......+ .......+++|.+.+..++.+-...+.|..++++.......+.... .
T Consensus 11 ~~~~I~~i~l~~~-------~~~~~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~----l 78 (318)
T 3sov_A 11 NRRDLRLVDATNG-------KENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG----L 78 (318)
T ss_dssp CEEEEEEEETTCT-------TSCCEEEE-EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC----C
T ss_pred ccCeEEEEECCCC-------ceEEEEEe-cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC----C
Confidence 5568888888721 10111111 1223567899998776555565667899999987653222222221 1
Q ss_pred eeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeeccc--eeEEEeCCCCCcEEEEec-CCCeEEEEEcccCCcc
Q 019059 169 HYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKAP 244 (346)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~ 244 (346)
....++++.+.+..|+.+. ..+.|.++++........+.... ...++++|.+..++.+-. ..+.|...++.- . .
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~-~ 156 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-S-S 156 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-C-S
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-C-C
Confidence 2466788887666666554 56789999987543322222122 899999987664555542 357888888763 2 2
Q ss_pred eeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeC
Q 019059 245 IQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWS 323 (346)
Q Consensus 245 ~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 323 (346)
...+ ...-...+.|+++|++..+.++-+..+.|..+|+.. ........+.......+++.
T Consensus 157 ~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-------------------~~~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 157 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-------------------TNRQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-------------------CSCEEEECSCCSCEEEEEEE
T ss_pred eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-------------------CceEEEecCCCCCceEEEEe
Confidence 2232 222345689999997735555556678999999874 11111111122234566664
Q ss_pred CCCCcEEEEeecCCeEEEeee
Q 019059 324 SREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 324 ~~~~~~l~s~~~d~~v~vw~~ 344 (346)
.+ .++.+-...+.|..++.
T Consensus 218 ~~--~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 218 ED--ILYWTDWSTHSILACNK 236 (318)
T ss_dssp TT--EEEEEETTTTEEEEEET
T ss_pred CC--EEEEEecCCCeEEEEEC
Confidence 32 36666556667776664
No 262
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.71 E-value=1.2e-06 Score=80.76 Aligned_cols=151 Identities=8% Similarity=0.002 Sum_probs=90.0
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeecc--CCceEEEEee---cCCCCcEEEEe------cCCeE
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH--VGKINCVLWW---SSGRHDKLVSI------DEENI 145 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~---~~~~~~~~~~~------~d~~i 145 (346)
+..+++. +.|+.|..+|.. +++.+-.+... ......+..+ .++. ++++. .++.|
T Consensus 121 ~g~v~v~----~~dg~l~AlDa~---------TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~--v~vg~~~~~~~~~g~v 185 (689)
T 1yiq_A 121 KGKVYVG----VLDGRLEAIDAK---------TGQRAWSVDTRADHKRSYTITGAPRVVNGK--VVIGNGGAEFGVRGYV 185 (689)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEECCSCTTSCCBCCSCCEEETTE--EEECCBCTTTCCBCEE
T ss_pred CCEEEEE----ccCCEEEEEECC---------CCCEeeeecCcCCCCCCccccCCcEEECCE--EEEEeCCCccCCCCEE
Confidence 4455553 578899999987 55555444321 1110111111 1443 45542 26899
Q ss_pred EEEEcCCCCCCceeeeccc-C-------------------------CCceeeEEEEeCCCCCcEEEEecCC---------
Q 019059 146 FLWSLDCSNKNAQVQSKQS-S-------------------------GMLHYLSGGAWDPHDVNAVAATCES--------- 190 (346)
Q Consensus 146 ~vwd~~~~~~~~~~~~~~~-~-------------------------~~~~~v~~~~~~~~~~~l~~~~~d~--------- 190 (346)
+.||..+++.......... . +.......++++|+...++++..++
T Consensus 186 ~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~ 265 (689)
T 1yiq_A 186 TAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRS 265 (689)
T ss_dssp EEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHH
T ss_pred EEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCC
Confidence 9999999887665542110 0 0000112567888888888887765
Q ss_pred ----------eEEEEEccCCCccceeecc-c------------eeEEEeCCCCC--cEEEEecCCCeEEEEEcccCCcce
Q 019059 191 ----------SVQFWDLRSMGKTNSIEHA-H------------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 191 ----------~i~i~d~~~~~~~~~~~~~-~------------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
.|..+|.++++.+-.+... + +..+.+ +|. ..++.++.+|.++++|.++ ++++
T Consensus 266 ~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~--~G~~~~~v~~~~~~G~l~~lD~~t-G~~l 342 (689)
T 1yiq_A 266 QAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPI--DGKPRKVLMQAPKNGFFYVIDRAT-GELL 342 (689)
T ss_dssp TTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TTEEEEEEEECCTTSEEEEEETTT-CCEE
T ss_pred CCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeecc--CCcEEEEEEEECCCCeEEEEECCC-CCEe
Confidence 3999999999987666532 1 112222 332 2678889999999999887 4343
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.71 E-value=2.3e-05 Score=67.87 Aligned_cols=254 Identities=11% Similarity=0.039 Sum_probs=140.9
Q ss_pred ceEEeeecCC--CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC--
Q 019059 67 EIWDLSSCPF--DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE-- 142 (346)
Q Consensus 67 ~v~~~~~~~~--~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-- 142 (346)
....++|.|+ +..|..+ ...+.|+.++.. ..... .+.........+++++++. ++++....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~----D~~~~I~~id~~---------~g~v~-~~~~~~~~P~giavd~dG~-lyVad~~~~~ 204 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV----GQRDAFRHVDFV---------NQYVD-IKTTNIGQCADVNFTLNGD-MVVVDDQSSD 204 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE----CBTSCEEEEETT---------TTEEE-EECCCCSCEEEEEECTTCC-EEEEECCSCT
T ss_pred CCceEEEccccCCCEEEEE----eCCCCEEEEECC---------CCEEE-EeecCCCCccEEEECCCCC-EEEEcCCCCc
Confidence 4568899984 4556654 222788888875 33332 3333445688999999999 55554311
Q ss_pred -C-eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCcccee-eccc---eeEEE
Q 019059 143 -E-NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSI-EHAH---VRNVD 215 (346)
Q Consensus 143 -~-~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~-~~~~---v~~~~ 215 (346)
. .+...+............ .......++++|+...|+.+. .++.|+.+|..++.....+ ..+. ...++
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia 279 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIV 279 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEE
T ss_pred ccceEEEEECCCCeecccccc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEE
Confidence 1 233333332211111111 112457789999444555554 5788999998877652222 2111 45799
Q ss_pred eCCCCCcEEEEecCCCeEEEEEcccCCcc---eeeecCC---------------CcceEEEEe---------CCCCCcEE
Q 019059 216 YDTKKKHLLVTAADESGIHLWDLRMLKAP---IQELPGH---------------THWTWAVCC---------NPEYDGFI 268 (346)
Q Consensus 216 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---------------~~~v~~v~~---------~~~~~~~l 268 (346)
|+|+++.++++-...+.|+.+++...... ...+.+. -.....+++ .+++ .+.
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~ly 358 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFY 358 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEE
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEE
Confidence 99999856666667789999886531111 1122111 123567888 7777 777
Q ss_pred EEecCCCeEEEEecCCCCCCCCCcccccCCccc-cccccccccccccceeeEEEeC-CCCCcEEEEeecCCeEEEeeecC
Q 019059 269 LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQ-RANSLLNSYSDYEDSVYGLAWS-SREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 269 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
++-...+.|+.++..- ..... .......... ..+... ....-.....|+++ +++. ++++-....+|+.++++.
T Consensus 359 vaD~~n~~I~~~~~~G-~v~t~-~G~g~~~~~G~~dG~~~--~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e~ 433 (433)
T 4hw6_A 359 FCDRDSHTVRVLTPEG-RVTTY-AGRGNSREWGYVDGELR--SQALFNHPTSIAYDMKRKC-FYIGDCDNHRVRKIAPEE 433 (433)
T ss_dssp EEETTTTEEEEECTTS-EEEEE-ECCCTTCSSCCBCEETT--TTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEECC
T ss_pred EEECCCCEEEEECCCC-CEEEE-EeCCCCCccccCCCccc--cccEeCCCcEEEEECCCCE-EEEEeCCCCEEEEEecCC
Confidence 7767778899887531 00000 0000000000 000000 00011236889999 5664 778777888999998863
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.71 E-value=3e-05 Score=66.50 Aligned_cols=223 Identities=8% Similarity=-0.042 Sum_probs=134.8
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCC
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG 121 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (346)
+.|+.+++...... .+......+.+++|.+.+..|..+ ....+.|..+++..... .......+.....
T Consensus 92 ~~I~~i~l~~~~~~----~~~~~~~~~~~l~~d~~~~~lyws---D~~~~~I~~~~~~g~~~-----~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 92 HEVRKMTLDRSEYT----SLIPNLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDIQ 159 (400)
T ss_dssp TEEEEECTTSCSCE----EEECSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEEC-----------CCCEEEECSSCS
T ss_pred ceeEEEccCCccee----EeccccCcceEEeeeeccCceEEE---ecCCCeEEEEEcccCCC-----CCcceEEEeCCCC
Confidence 55666655543322 223345678899999987777775 34567888888761000 0112222222344
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEccC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRS 199 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~ 199 (346)
....+++.+.+..++++-...+.|.+.+++... ...+.... .....++++.|.+..|+.+.. .+.|...++..
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-~~~l~~~~----~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCS-EEEEEECS----SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCc-eEEEEeCC----CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 577888888666555555667899999987443 22222211 225789999997777777653 47899888875
Q ss_pred CCccceeecc-c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee-cC--CCcceEEEEeCCCCCcEEEEecCC
Q 019059 200 MGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PG--HTHWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 200 ~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~--~~~~v~~v~~~~~~~~~l~s~~~d 274 (346)
......+... . .+.|++++++..++++-...+.|..+|+.. . ....+ .. .......+++. .+ .++.+-...
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~l~~P~gl~v~-~~-~lywtd~~~ 310 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVF-ED-KVFWTDIIN 310 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-C-CCEEEEECSSTTSSEEEEEEE-TT-EEEEEESSS
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-C-ccEEEEeCCCCCCCCEEEEEe-CC-EEEEecCCC
Confidence 4433322222 2 899999988775666666678999999874 2 22222 21 12334566663 23 566666667
Q ss_pred CeEEEEecCCC
Q 019059 275 STVNLWLVSTS 285 (346)
Q Consensus 275 ~~i~iwd~~~~ 285 (346)
+.|..+|..++
T Consensus 311 ~~V~~~~~~~G 321 (400)
T 3p5b_L 311 EAIFSANRLTG 321 (400)
T ss_dssp CSEEEEESSSC
T ss_pred CeEEEEEcCCC
Confidence 88988886653
No 265
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.70 E-value=2.3e-05 Score=68.31 Aligned_cols=257 Identities=11% Similarity=0.063 Sum_probs=140.6
Q ss_pred ceEEeeecC-CCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec---cCCceEEEEe-------ecCCCCc
Q 019059 67 EIWDLSSCP-FDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA---HVGKINCVLW-------WSSGRHD 135 (346)
Q Consensus 67 ~v~~~~~~~-~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~-------~~~~~~~ 135 (346)
....|+|.| +...|+++. ...+.|++.|++ .......+.. .......++| ++++..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~---~~~~~i~~ID~~---------~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~l 207 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICY---DGHKAIQLIDLK---------NRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYM 207 (496)
T ss_dssp SEEEEEEETTEEEEEEEEE---ETEEEEEEEETT---------TTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEE
T ss_pred CCCEEEEccCCCCEEEEEE---CCCCeEEEEECC---------CCEEEEEEccCccccCCCcEEEEeecccccCCCCCEE
Confidence 456889998 466666653 234568888876 3222222222 1235789999 9999864
Q ss_pred EEEEecCC------eEEEEEcCCCCCCc-----eeeecccCCCceeeEEEEeCCCCCcEEEEe-cCCeEEEEEcc-----
Q 019059 136 KLVSIDEE------NIFLWSLDCSNKNA-----QVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLR----- 198 (346)
Q Consensus 136 ~~~~~~d~------~i~vwd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~----- 198 (346)
+++...++ .|.+++........ .... . -.....++.+|++..|+++. .++.|..+|+.
T Consensus 208 yvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~ 282 (496)
T 3kya_A 208 IVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-A----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKT 282 (496)
T ss_dssp EEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-E----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHH
T ss_pred EEEeCCCCCcccCceEEEEecCCCCceeecccceeec-c----CCCceEEEEcCCCCeEEEEECCCCEEEEEeccccccc
Confidence 55543331 36666544311121 1221 1 11456788999777766655 57889999998
Q ss_pred --CCCc-----------cce-eec--cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcce---eeecCC---C---
Q 019059 199 --SMGK-----------TNS-IEH--AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPI---QELPGH---T--- 252 (346)
Q Consensus 199 --~~~~-----------~~~-~~~--~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~---~--- 252 (346)
++.. ... +.. .. ...|+|+|+++.++++-.....|+.+|.......+ ..+.+. .
T Consensus 283 ~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~ 362 (496)
T 3kya_A 283 IKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYR 362 (496)
T ss_dssp HHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCB
T ss_pred ccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCccc
Confidence 5543 111 111 12 78999999998556666677889997765322111 222211 0
Q ss_pred ---------cceE-EEEeC-------CCCCcEEEEecCCCeEEEEecCCCCCCCCCccccc------CCccc-ccccccc
Q 019059 253 ---------HWTW-AVCCN-------PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV------ESPNQ-RANSLLN 308 (346)
Q Consensus 253 ---------~~v~-~v~~~-------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~-~~~~~~~ 308 (346)
.... .+... +++ .++++-...+.|+.++..- ..... ..... ..... ..+.+..
T Consensus 363 DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~~~G-~v~Ti-aG~g~~~~~~~~~~~G~~dG~~~~ 439 (496)
T 3kya_A 363 DDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVTPEG-IVSTY-AGRGASTSLADGNQWGTDDGDLRE 439 (496)
T ss_dssp CCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEECTTC-BEEEE-EESCTTHHHHHSCSCCCCCEETTT
T ss_pred CCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEeCCC-CEEEE-ecccccccccCccccccCCCCchh
Confidence 1123 34443 455 6666666678888887331 00000 00000 00000 0010000
Q ss_pred ccccccceeeEEEeCCC-CCcEEEEeecCCeEEEeeecC
Q 019059 309 SYSDYEDSVYGLAWSSR-EPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 309 ~~~~~~~~v~~~~~~~~-~~~~l~s~~~d~~v~vw~~~~ 346 (346)
...-.....|+++++ +. ++++=....+||.+++++
T Consensus 440 --~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 440 --VARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp --TCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECC
T ss_pred --hhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCC
Confidence 011123688999997 64 777778889999998864
No 266
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.66 E-value=2.9e-05 Score=66.05 Aligned_cols=222 Identities=11% Similarity=-0.043 Sum_probs=124.5
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCC
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKN 156 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 156 (346)
+..++++ +.++.|..+|.. +++.+-.............. .++. +++++.++.|..+|..+++..
T Consensus 103 ~~~v~v~----~~~g~l~a~d~~---------tG~~~W~~~~~~~~~~~p~~-~~~~--v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 103 GGHVYIG----SEKAQVYALNTS---------DGTVAWQTKVAGEALSRPVV-SDGL--VLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp TTEEEEE----ETTSEEEEEETT---------TCCEEEEEECSSCCCSCCEE-ETTE--EEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEE----cCCCEEEEEECC---------CCCEEEEEeCCCceEcCCEE-ECCE--EEEEcCCCeEEEEECCCCcEE
Confidence 4555554 367889999987 45554444332221111222 2343 677777899999999888765
Q ss_pred ceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---------eeEEEeCC--CCCcEEE
Q 019059 157 AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---------VRNVDYDT--KKKHLLV 225 (346)
Q Consensus 157 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------v~~~~~~~--~~~~~l~ 225 (346)
..................... +..++++..++.|..+|..+++......... +..+.-.| .+. .++
T Consensus 167 W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~ 243 (376)
T 3q7m_A 167 WTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVF 243 (376)
T ss_dssp EEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT-EEE
T ss_pred EEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC-EEE
Confidence 554432110000000111221 3567777788999999999998765554221 00011111 133 567
Q ss_pred EecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccc
Q 019059 226 TAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANS 305 (346)
Q Consensus 226 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 305 (346)
.++.++.+..+|.++ .+.+.... ......+... + ..++.++.++.|..+|..+ ++
T Consensus 244 ~~~~~g~l~~~d~~t-G~~~w~~~--~~~~~~~~~~--~-~~l~~~~~~g~l~~~d~~t-------------------G~ 298 (376)
T 3q7m_A 244 ALAYNGNLTALDLRS-GQIMWKRE--LGSVNDFIVD--G-NRIYLVDQNDRVMALTIDG-------------------GV 298 (376)
T ss_dssp EECTTSCEEEEETTT-CCEEEEEC--CCCEEEEEEE--T-TEEEEEETTCCEEEEETTT-------------------CC
T ss_pred EEecCcEEEEEECCC-CcEEeecc--CCCCCCceEE--C-CEEEEEcCCCeEEEEECCC-------------------Cc
Confidence 777889999999987 43443333 2233444443 4 5677778899999999988 44
Q ss_pred ccccccc-ccceeeEEEeCCCCCcEEEEeecCCeEEEeeec
Q 019059 306 LLNSYSD-YEDSVYGLAWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 306 ~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
.+..... ....+...... +. .|..++.+|.|.++|.+
T Consensus 299 ~~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVE 336 (376)
T ss_dssp EEEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETT
T ss_pred EEEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECC
Confidence 4433321 11112222222 23 56677778888888753
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.65 E-value=1.7e-05 Score=65.36 Aligned_cols=206 Identities=9% Similarity=-0.030 Sum_probs=117.8
Q ss_pred ceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC
Q 019059 110 LERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE 189 (346)
Q Consensus 110 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 189 (346)
.+.+..+... .....++|+++++ ++++...++.|..||.+.. ...... . .....++++.++++.+++....
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~--~~~~~~--~---~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGT-IFVTNHEVGEIVSITPDGN--QQIHAT--V---EGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSC-EEEEETTTTEEEEECTTCC--EEEEEE--C---SSEEEEEEECTTSCEEEEEECT
T ss_pred ceEeEeCCCC-CCcceEEECCCCC-EEEEeCCCCeEEEECCCCc--eEEEEe--C---CCCceeEEEcCCCcEEEEeccC
Confidence 3444555332 4577899999887 4555456889999987642 112111 1 1267899999999855544332
Q ss_pred --CeEEEEEccCCCccceeec--cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceee---------ecCCCcce
Q 019059 190 --SSVQFWDLRSMGKTNSIEH--AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE---------LPGHTHWT 255 (346)
Q Consensus 190 --~~i~i~d~~~~~~~~~~~~--~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------~~~~~~~v 255 (346)
..|..+|..+++....... .. ...++..+.+. ++++-..++.|..+|.......+.. ....-...
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p 171 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA 171 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC
Confidence 2477778777764332221 12 45555555554 5666556789999987642111110 00111234
Q ss_pred EEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeec
Q 019059 256 WAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSY 335 (346)
Q Consensus 256 ~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 335 (346)
+.+ +|++..++++-...+.|..+++... .... ..+....+ .....++++++|. ++++...
T Consensus 172 ngi--s~dg~~lyv~d~~~~~I~~~~~~~~-g~~~------------~~~~~~~~----~~P~gi~vd~dG~-l~va~~~ 231 (306)
T 2p4o_A 172 NGL--KRFGNFLYVSNTEKMLLLRIPVDST-DKPG------------EPEIFVEQ----TNIDDFAFDVEGN-LYGATHI 231 (306)
T ss_dssp EEE--EEETTEEEEEETTTTEEEEEEBCTT-SCBC------------CCEEEEES----CCCSSEEEBTTCC-EEEECBT
T ss_pred CCc--CcCCCEEEEEeCCCCEEEEEEeCCC-CCCC------------ccEEEecc----CCCCCeEECCCCC-EEEEeCC
Confidence 555 7887345555666789999998740 0000 00111111 2356788888886 7777666
Q ss_pred CCeEEEeeec
Q 019059 336 DGRVRNHMLE 345 (346)
Q Consensus 336 d~~v~vw~~~ 345 (346)
.+.|.+++.+
T Consensus 232 ~~~V~~~~~~ 241 (306)
T 2p4o_A 232 YNSVVRIAPD 241 (306)
T ss_dssp TCCEEEECTT
T ss_pred CCeEEEECCC
Confidence 7778887754
No 268
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.64 E-value=9.3e-05 Score=69.57 Aligned_cols=234 Identities=11% Similarity=0.058 Sum_probs=140.2
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee-------ccCCceEEEEeecCCCCcEE
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD-------AHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~~~ 137 (346)
...|.++...+++...+.+ .++.+.+|+.. ..+...... .....|.++...++|. +.
T Consensus 214 ~~~i~~i~~d~~g~lwigt-----~~~Gl~~~~~~---------~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lW 277 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVAT-----EGAGLFLINPK---------TKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR--LW 277 (795)
T ss_dssp CCCEEEEEEEETTEEEEEE-----BSSCEEEEETT---------TTEEEEECCCTTCTTSCSCSBEEEEEECTTSC--EE
T ss_pred CCeeEEEEEcCCCCEEEEE-----CCCCeEEEeCC---------CCeEEEeecCCCCccccCCCeEEEEEEcCCCC--EE
Confidence 4567888777766655543 33357788865 222111111 1235699999888887 55
Q ss_pred EEecCCeEEEEEcCCCCCCceeeec---ccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee-------
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSK---QSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE------- 207 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------- 207 (346)
++..+ -|.+||..+.. ...+... ...-....|.++...+++. +.+++.++.|..++..+........
T Consensus 278 igt~~-Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l 354 (795)
T 4a2l_A 278 IGTFN-DLNIYHEGTDS-FASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSL 354 (795)
T ss_dssp EEESS-CEEEEETTTTE-EEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSC
T ss_pred EEeCC-hhheEcCCCCe-EEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCC
Confidence 55444 68888876542 1111110 0111234789999988776 5666677778899876554211110
Q ss_pred ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec---------CCCcceEEEEeCCCCCcEEEEecCCCeE
Q 019059 208 HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP---------GHTHWTWAVCCNPEYDGFILSAGTDSTV 277 (346)
Q Consensus 208 ~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~v~~v~~~~~~~~~l~s~~~d~~i 277 (346)
... |.++...+++. +..|+.++-|..||..+ . ....+. .....|.++...+++ .+|..|+.++-|
T Consensus 355 ~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl 429 (795)
T 4a2l_A 355 SDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPIT-Q-RFTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGL 429 (795)
T ss_dssp SCSSEEEEEECTTSC--EEEEESSSCEEEECTTT-C-CEEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEE
T ss_pred CCCeeEEEEECCCCC--EEEEECCCCeEEEcCCC-C-cEEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCce
Confidence 112 99999999886 45567777788998765 2 232222 123568899888888 646667777779
Q ss_pred EEEecCCCCCCCCCcccccCCccccccccccccc----cccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 278 NLWLVSTSNHDELPSESLVESPNQRANSLLNSYS----DYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 278 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
.+||..+ ++...... .....|.++...+++. +.+.. .+| +.+|+.
T Consensus 430 ~~~d~~~-------------------~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt-~~G-l~~~~~ 478 (795)
T 4a2l_A 430 SILHRNS-------------------GQVENFNQRNSQLVNENVYAILPDGEGN-LWLGT-LSA-LVRFNP 478 (795)
T ss_dssp EEEETTT-------------------CCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEE-SSC-EEEEET
T ss_pred eEEeCCC-------------------CcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEe-cCc-eeEEeC
Confidence 9999876 22111100 1234688999888886 44443 344 666664
No 269
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.64 E-value=5.9e-05 Score=62.44 Aligned_cols=222 Identities=10% Similarity=-0.032 Sum_probs=134.3
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCC
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVG 121 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (346)
+.|..+++....... .........+.+++|.+.++.|..+ ....+.|..+++.. .......+...-.
T Consensus 13 ~~I~~i~l~~~~~~~--~~~~~~~~~~~~ld~d~~~~~lyw~---D~~~~~I~r~~~~g--------~~~~~~~~~~~l~ 79 (318)
T 3sov_A 13 RDLRLVDATNGKENA--TIVVGGLEDAAAVDFVFSHGLIYWS---DVSEEAIKRTEFNK--------TESVQNVVVSGLL 79 (318)
T ss_dssp EEEEEEETTCTTSCC--EEEEEEEEEEEEEEEEGGGTEEEEE---ETTTTEEEEEETTS--------SSCCCEEEEECCS
T ss_pred CeEEEEECCCCceEE--EEEecCCCccEEEEEEeCCCEEEEE---ECCCCcEEEEEccC--------CCceEEEEcCCCC
Confidence 456666665542111 1111222456789999977777765 35567888888762 1111111222223
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEccC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRS 199 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~ 199 (346)
....+++.+.+..++++-...+.|.+++++... ...+... ......++++.|.+..|+.+.. .+.|...++..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~----~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQ----ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS----SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeC----CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 466788887666555555667899999987432 2222211 1225688999987777777653 57888888874
Q ss_pred CCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 200 MGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 200 ~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
... ..+.... .+.|+++|++..++++-...+.|..+|+.. ................+++.. + .++.+-...+.
T Consensus 155 ~~~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~glav~~-~-~lywtd~~~~~ 230 (318)
T 3sov_A 155 SSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG-TNRQAVVKGSLPHPFALTLFE-D-ILYWTDWSTHS 230 (318)
T ss_dssp CSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSCCSCEEEEEEET-T-EEEEEETTTTE
T ss_pred CCe-EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC-CceEEEecCCCCCceEEEEeC-C-EEEEEecCCCe
Confidence 332 2332122 899999997775777767778999999874 222222222334456677753 3 56666666788
Q ss_pred EEEEecCCC
Q 019059 277 VNLWLVSTS 285 (346)
Q Consensus 277 i~iwd~~~~ 285 (346)
|..++..++
T Consensus 231 V~~~~~~~G 239 (318)
T 3sov_A 231 ILACNKYTG 239 (318)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 999988654
No 270
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.64 E-value=4.5e-05 Score=65.43 Aligned_cols=181 Identities=11% Similarity=0.018 Sum_probs=112.0
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCC--CCceeeecccCC
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSN--KNAQVQSKQSSG 166 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~ 166 (346)
....|+..+++ ..... .+......+..++|++.+..++.+-...+.|+.+++.... .........
T Consensus 90 ~~~~I~~i~l~---------~~~~~-~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~--- 156 (400)
T 3p5b_L 90 NRHEVRKMTLD---------RSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 156 (400)
T ss_dssp ETTEEEEECTT---------SCSCE-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS---
T ss_pred ccceeEEEccC---------Cccee-EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---
Confidence 44578888876 22222 2223456788999998777655555667899999987532 111112111
Q ss_pred CceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecC-CCeEEEEEcccCC
Q 019059 167 MLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAAD-ESGIHLWDLRMLK 242 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~ 242 (346)
......++++.+.+..|+.+. ..+.|.+.++........+... . ...|+++|.+..++++-.. .+.|...++.- .
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~ 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-C
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-C
Confidence 122567888887666666654 5788999998865443333322 2 8999999977645555433 47888888874 2
Q ss_pred cceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 243 APIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 243 ~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
....+ ...-...+.|++++++..+.++-...+.|..+|+..
T Consensus 236 -~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 236 -DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp -SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 22333 333356789999988734445545577899999874
No 271
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.62 E-value=6.6e-06 Score=68.46 Aligned_cols=198 Identities=9% Similarity=0.042 Sum_probs=115.0
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC---------------CCceeeEEEEeCCCCCcEEEE
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS---------------GMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~ 186 (346)
...+++|.+++. +++++..++.|..|+..++. ...+...... .......++++.+++..|+++
T Consensus 20 ~p~~i~~d~~g~-~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDSTNK-GFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCCCEECCTTCS-SEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CceEEEEcCCCC-EEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 456788999877 46666678899999876543 1111110000 001246889999744456666
Q ss_pred ecCCeEEEEEccCCCccc--eeecc---c-eeEEEeCC-CCCcEEEEecC-----------------CCeEEEEEcccCC
Q 019059 187 TCESSVQFWDLRSMGKTN--SIEHA---H-VRNVDYDT-KKKHLLVTAAD-----------------ESGIHLWDLRMLK 242 (346)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~--~~~~~---~-v~~~~~~~-~~~~~l~~~~~-----------------dg~i~i~d~~~~~ 242 (346)
...+.|..+|..+++... ....+ . +..+++.+ +|. ++++... ++.|..+|... .
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-~ 175 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST-K 175 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT-T
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCC-C
Confidence 555568888877553211 11111 1 78999999 887 6665432 36788888754 2
Q ss_pred cceeeecCCCcceEEEEeCCCCCcEE-EEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEE
Q 019059 243 APIQELPGHTHWTWAVCCNPEYDGFI-LSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLA 321 (346)
Q Consensus 243 ~~~~~~~~~~~~v~~v~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 321 (346)
. +..+.........++++|++ ..| ++-..++.|.+|++...... ..+....+ .+ ...++
T Consensus 176 ~-~~~~~~~~~~p~gia~~~dg-~~lyv~d~~~~~I~~~~~~~~~~~--------------~~~~~~~~---~g-P~gi~ 235 (322)
T 2fp8_A 176 E-TTLLLKELHVPGGAEVSADS-SFVLVAEFLSHQIVKYWLEGPKKG--------------TAEVLVKI---PN-PGNIK 235 (322)
T ss_dssp E-EEEEEEEESCCCEEEECTTS-SEEEEEEGGGTEEEEEESSSTTTT--------------CEEEEEEC---SS-EEEEE
T ss_pred E-EEEeccCCccCcceEECCCC-CEEEEEeCCCCeEEEEECCCCcCC--------------ccceEEeC---CC-CCCeE
Confidence 2 22222122345679999999 644 44466789999998741000 01111111 12 67788
Q ss_pred eCCCCCcEEEEeec----------CCeEEEeee
Q 019059 322 WSSREPWIFASLSY----------DGRVRNHML 344 (346)
Q Consensus 322 ~~~~~~~~l~s~~~----------d~~v~vw~~ 344 (346)
++++|. +.++... .+.|..++.
T Consensus 236 ~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 236 RNADGH-FWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp ECTTSC-EEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred ECCCCC-EEEEecCcccccccCCCccEEEEECC
Confidence 999886 5555543 355666654
No 272
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.58 E-value=0.00021 Score=60.26 Aligned_cols=271 Identities=11% Similarity=0.135 Sum_probs=165.2
Q ss_pred CcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCC
Q 019059 27 DHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLN 106 (346)
Q Consensus 27 ~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~ 106 (346)
++.++++-.-..+..+++.++++...+.... . +-.--+.-.+|..+.++.- ...+++|+|++
T Consensus 33 ESDkyicVrE~~~~~~~vvIiDl~~~~~~~r--r----pi~AdsAIMnP~~~iiALr-----ag~~lQiFnle------- 94 (494)
T 1bpo_A 33 ESDKFICIREKVGEQAQVVIIDMNDPSNPIR--R----PISADSAIMNPASKVIALK-----AGKTLQIFNIE------- 94 (494)
T ss_dssp EETTEEEEEECCTTCCEEEEEETTSTTSCEE--E----ECCCSEEEECSSSSCEEEE-----ETTEEEEEETT-------
T ss_pred ecCceEEEEecCCCCCeEEEEECCCCCccee--c----ccccceeeeCCCCcEEEEe-----cCCeEEEEchH-------
Confidence 3455666555556667888998888655422 1 1122244578877655543 35699999998
Q ss_pred CccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEE
Q 019059 107 SPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAA 186 (346)
Q Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 186 (346)
....+..+.- .+.|.--.|-.+.. +.+++ +..|+-|+++....+.+.......-....|..-..+++.++++..
T Consensus 95 --~K~klks~~~-~e~VvfWkWis~~~-l~lVT--~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 168 (494)
T 1bpo_A 95 --MKSKMKAHTM-TDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 168 (494)
T ss_dssp --TTEEEEEEEC-SSCCCEEEEEETTE-EEEEC--SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEE
T ss_pred --Hhhhhcceec-CCCceEEEecCCCe-EEEEc--CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEE
Confidence 4555555533 45688888987765 34443 689999999875556555554432224577778889999987765
Q ss_pred ec-------CCeEEEEEccCCCccceeeccc-eeEEEeCCCC----CcEEEEecC---CCeEEEEEcccC--Ccc-----
Q 019059 187 TC-------ESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKK----KHLLVTAAD---ESGIHLWDLRML--KAP----- 244 (346)
Q Consensus 187 ~~-------d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~----~~~l~~~~~---dg~i~i~d~~~~--~~~----- 244 (346)
+- .|.+.+|..+.+. ...-.+| ..-..+-.+| ..+++.+.. .+.+++.++... +.+
T Consensus 169 GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk 246 (494)
T 1bpo_A 169 GISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK 246 (494)
T ss_dssp EEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCE
T ss_pred eecccCCcccceEEEeeccccc--cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccce
Confidence 41 3678888877543 2333466 2222222222 124444433 278999998643 111
Q ss_pred -eeeecC---CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEE
Q 019059 245 -IQELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGL 320 (346)
Q Consensus 245 -~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 320 (346)
+..+.. ...-..++..++.. ..++..+.-|.|++||+.+ +.+++.-.-....|..-
T Consensus 247 ~vdv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleT-------------------gt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 247 AVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET-------------------GTCIYMNRISGETIFVT 306 (494)
T ss_dssp EEECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTT-------------------CCEEEEEECCSSCEEEE
T ss_pred eeeeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEeccc-------------------ceeeeeecccCCceEEe
Confidence 111111 12334567778877 7888889999999999999 88887766656666555
Q ss_pred EeCCCCCcEEEEeecCCeEEEeee
Q 019059 321 AWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
+-+..... ++.....|.|.--.+
T Consensus 307 ~~~~~~~G-i~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 307 APHEATAG-IIGVNRKGQVLSVCV 329 (494)
T ss_dssp EEETTTTE-EEEEETTCEEEEEEE
T ss_pred cccCCCCc-EEEEccCceEEEEEE
Confidence 54444332 344456676654443
No 273
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.55 E-value=0.00059 Score=64.17 Aligned_cols=231 Identities=11% Similarity=0.036 Sum_probs=141.9
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee--------ccCCceEEEEeecCCCCcEE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD--------AHVGKINCVLWWSSGRHDKL 137 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~ 137 (346)
..|.++...+++...+.+ .. .|.+|+.. .... ..+. .....|.++...++|. +-
T Consensus 263 ~~i~~i~~d~~g~lWigt-----~~-Gl~~~~~~---------~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lW 324 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGT-----FN-DLNIYHEG---------TDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGG--MW 324 (795)
T ss_dssp SBEEEEEECTTSCEEEEE-----SS-CEEEEETT---------TTEE-EEECCCTTSTTSCSSSCEEEEEECTTSC--EE
T ss_pred CeEEEEEEcCCCCEEEEe-----CC-hhheEcCC---------CCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcC--EE
Confidence 568899888877665553 33 57888865 2221 1111 1235799999988887 66
Q ss_pred EEecCCeEEEEEcCCCCCCceeeecc--cCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee--------
Q 019059 138 VSIDEENIFLWSLDCSNKNAQVQSKQ--SSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE-------- 207 (346)
Q Consensus 138 ~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------- 207 (346)
+++.++-|..++..+... ....... ..-....|.++...+++. |.+|+.++-|..||..+++......
T Consensus 325 igt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp EEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------C
T ss_pred EEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 666678888888764321 1111110 111234688888887765 6667777779999988765322111
Q ss_pred -ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec-----CCCcceEEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 208 -HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (346)
Q Consensus 208 -~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iw 280 (346)
... |.++...+++. +|..|+.++-+.++|.++ + ....+. .....|.++...++| .+.+. +.+| |.+|
T Consensus 403 l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~-~-~~~~~~~~~~~l~~~~v~~i~~d~~g-~lwig-t~~G-l~~~ 476 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNS-G-QVENFNQRNSQLVNENVYAILPDGEG-NLWLG-TLSA-LVRF 476 (795)
T ss_dssp CSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTT-C-CEEEECTTTSCCSCSCEEEEEECSSS-CEEEE-ESSC-EEEE
T ss_pred CCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCC-C-cEEEeecCCCCcCCCeeEEEEECCCC-CEEEE-ecCc-eeEE
Confidence 012 89999888885 466777777899999875 3 233332 134578999988888 54443 3444 8889
Q ss_pred ecCCCCCCCCCcccccCCcccccccccccc------ccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 281 LVSTSNHDELPSESLVESPNQRANSLLNSY------SDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
|..+ ++..... .-....|.++...+++. +.+... . -+..|+.
T Consensus 477 ~~~~-------------------~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~-~-Gl~~~~~ 524 (795)
T 4a2l_A 477 NPEQ-------------------RSFTTIEKEKDGTPVVSKQITTLFRDSHKR-LWIGGE-E-GLSVFKQ 524 (795)
T ss_dssp ETTT-------------------TEEEECCBCTTCCBCCCCCEEEEEECTTCC-EEEEES-S-CEEEEEE
T ss_pred eCCC-------------------CeEEEccccccccccCCceEEEEEECCCCC-EEEEeC-C-ceEEEeC
Confidence 8876 2211110 11234688999999886 544433 3 4666664
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=1.1e-05 Score=74.03 Aligned_cols=229 Identities=11% Similarity=-0.020 Sum_probs=118.2
Q ss_pred eEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEe-cC----
Q 019059 68 IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSI-DE---- 142 (346)
Q Consensus 68 v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~d---- 142 (346)
..++++.++++.++++ |..+..+.+||... .....+..+.... .-.+++..++++ +++.++ .+
T Consensus 245 ~~~~~~~~~g~lyv~G---G~~~~~v~~yd~~t-------~~W~~~~~~~~~R-~~~s~~~~~dg~-iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTG---GNDAKKTSLYDSSS-------DSWIPGPDMQVAR-GYQSSATMSDGR-VFTIGGSWSGGVF 312 (656)
T ss_dssp SCEEEECTTSCEEEEC---SSSTTCEEEEEGGG-------TEEEECCCCSSCC-SSCEEEECTTSC-EEEECCCCCSSSC
T ss_pred cccccCCCCCCEEEeC---CCCCCceEEecCcC-------CceeECCCCCccc-cccceEEecCCe-EEEEeCcccCCcc
Confidence 3346777777666663 23456899999872 2333333332222 223455566777 566666 33
Q ss_pred -CeEEEEEcCCCCCCceeee----cccCCCceeeEEEEeCCCCCcEEEEecC---------CeEEEEEccCCCccceee-
Q 019059 143 -ENIFLWSLDCSNKNAQVQS----KQSSGMLHYLSGGAWDPHDVNAVAATCE---------SSVQFWDLRSMGKTNSIE- 207 (346)
Q Consensus 143 -~~i~vwd~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~- 207 (346)
..+.+||..+.. ..... ..... .-....+..++..++.++.+ ..+..||..+........
T Consensus 313 ~~~~e~yd~~t~~--W~~~~~~~~~p~~~---~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~ 387 (656)
T 1k3i_A 313 EKNGEVYSPSSKT--WTSLPNAKVNPMLT---ADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK 387 (656)
T ss_dssp CCCEEEEETTTTE--EEEETTSCSGGGCC---CCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE
T ss_pred cccceEeCCCCCc--ceeCCCcccccccc---ccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc
Confidence 578999987643 22211 00000 00011233455555566544 356788888765322111
Q ss_pred --c-------cc-eeEEEeCC-CCCcEEEEecCCC-----------eEEEEEcccCCcceeeec---CCCcc-eEEEEeC
Q 019059 208 --H-------AH-VRNVDYDT-KKKHLLVTAADES-----------GIHLWDLRMLKAPIQELP---GHTHW-TWAVCCN 261 (346)
Q Consensus 208 --~-------~~-v~~~~~~~-~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~---~~~~~-v~~v~~~ 261 (346)
. .. -.++.|.. ++. +++.|+.++ .+.+||..+.. ...+. .+... -.+....
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGK-ILTFGGSPDYQDSDATTNAHIITLGEPGTSP--NTVFASNGLYFARTFHTSVVL 464 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTE-EEEECCBSSSSSSBCCCCEEEEECCSTTSCC--EEEECTTCCSSCCBSCEEEEC
T ss_pred cccccccCCCCCCCceEeccCCCCe-EEEEeCCCCCCCCCcCCcceEEEcCCCCCCC--eeEEccCCCCCCcccCCeEEC
Confidence 0 01 33444443 454 788887432 57788876422 22221 11122 2344566
Q ss_pred CCCCcEEEEecCC-----------CeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEE
Q 019059 262 PEYDGFILSAGTD-----------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIF 330 (346)
Q Consensus 262 ~~~~~~l~s~~~d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 330 (346)
|++ ++++.|+.+ ..+.+||..+. ....+..+...........+.|+++ ++
T Consensus 465 ~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-----------------~W~~~~~~~~~R~~hs~a~ll~dg~-v~ 525 (656)
T 1k3i_A 465 PDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQD-----------------TFYKQNPNSIVRVYHSISLLLPDGR-VF 525 (656)
T ss_dssp TTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-----------------EEEECCCCSSCCCTTEEEEECTTSC-EE
T ss_pred CCC-CEEEECCcccCcCcCCCCcccceEEEcCCCC-----------------ceeecCCCCCccccccHhhcCCCcE-EE
Confidence 888 888888864 46889998761 1122222222222123345678887 88
Q ss_pred EEeec
Q 019059 331 ASLSY 335 (346)
Q Consensus 331 ~s~~~ 335 (346)
+.|+.
T Consensus 526 v~GG~ 530 (656)
T 1k3i_A 526 NGGGG 530 (656)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 88874
No 275
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.49 E-value=0.00032 Score=58.96 Aligned_cols=240 Identities=9% Similarity=0.036 Sum_probs=124.2
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee---ccCCceEEEEeecC---CCCcEEEE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD---AHVGKINCVLWWSS---GRHDKLVS 139 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~---~~~~~~~~ 139 (346)
.....++|.|+++.+++- ..+.|.+++ .. ....+..+. ........++|+|+ +..++++.
T Consensus 31 ~~P~~ia~~pdG~l~V~e-----~~g~I~~i~-~g--------~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAE-----RPGRIRLFR-EG--------RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp SCEEEEEECTTSCEEEEE-----TTTEEEEEE-TT--------EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCCeEEEEe-----CCCeEEEEE-CC--------CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 456789999999755442 457888887 31 222222221 22456789999998 55444444
Q ss_pred ecC-----CeEEEEEcCCCCC--Cceeeeccc--CCCceeeEEEEeCCCCCcEEEEec-------------CCeEEEEEc
Q 019059 140 IDE-----ENIFLWSLDCSNK--NAQVQSKQS--SGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQFWDL 197 (346)
Q Consensus 140 ~~d-----~~i~vwd~~~~~~--~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~d~ 197 (346)
... +.|..++...... ...+..... .........++|.|++...++.+. .+.|.-+|.
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC
Confidence 433 6788888764311 111111111 111224468999999965554332 156766666
Q ss_pred cCC------------Cccceeeccc--eeEEEeCC-CCCcEEEEecCCCe--------EEEEEccc--------------
Q 019059 198 RSM------------GKTNSIEHAH--VRNVDYDT-KKKHLLVTAADESG--------IHLWDLRM-------------- 240 (346)
Q Consensus 198 ~~~------------~~~~~~~~~~--v~~~~~~~-~~~~~l~~~~~dg~--------i~i~d~~~-------------- 240 (346)
... .....+..++ ...++|+| ++. ++++-..... |.+...-.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~ 255 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDP 255 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCT
T ss_pred CCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCC
Confidence 531 1222333344 88999999 565 5555333222 33322110
Q ss_pred -CCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeE
Q 019059 241 -LKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYG 319 (346)
Q Consensus 241 -~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 319 (346)
...++..+. +......++| .+| .++++.-..+.|...++....... + ..+. ..+......+.+
T Consensus 256 ~~~~p~~~~~-~~~ap~G~~~-~~G-~l~v~~~~~~~v~~v~~~~~~~~~-----------~-~~~~-~~~~~~~~rp~~ 319 (352)
T 2ism_A 256 RYRDPLYFWP-QGFPPGNLAF-FRG-DLYVAGLRGQALLRLVLEGERGRW-----------R-VLRV-ETALSGFGRLRE 319 (352)
T ss_dssp TSCCCSEECT-TCCCEEEEEE-ETT-EEEEEETTTTEEEEEEEEEETTEE-----------E-EEEE-EEEEESSCCEEE
T ss_pred CCcCCeEecC-CCCCCcceEE-ECC-EEEEEECCCCEEEEEEECCCCcce-----------e-ecch-heecccCCCeeE
Confidence 011333332 2234566777 456 666666666777777766410000 0 0000 111111245899
Q ss_pred EEeCCCCCcEEEEe-ecCC
Q 019059 320 LAWSSREPWIFASL-SYDG 337 (346)
Q Consensus 320 ~~~~~~~~~~l~s~-~~d~ 337 (346)
+++.|+|. ++++. ..+|
T Consensus 320 v~~~pdG~-lyv~~~~~~g 337 (352)
T 2ism_A 320 VQVGPDGA-LYVTTSNRDG 337 (352)
T ss_dssp EEECTTSC-EEEEECSTTT
T ss_pred EEECCCCc-EEEEEeCCCC
Confidence 99999997 55554 3344
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.46 E-value=0.00018 Score=66.89 Aligned_cols=181 Identities=11% Similarity=0.019 Sum_probs=110.1
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCC--CceeeecccCC
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNK--NAQVQSKQSSG 166 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~ 166 (346)
....|+..++. .... ..+......+..++|.+.+..++++-...+.|+.+++..... ........
T Consensus 402 n~~~Ir~i~l~---------~~~~-~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~--- 468 (791)
T 3m0c_C 402 NRHEVRKMTLD---------RSEY-TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 468 (791)
T ss_dssp CBSSEEEECTT---------SCCC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---
T ss_pred cccceeEeecc---------CCcc-eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec---
Confidence 44466776665 2222 222234456789999987765555656678899999875321 11111111
Q ss_pred CceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCC-CeEEEEEcccCC
Q 019059 167 MLHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLK 242 (346)
Q Consensus 167 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~ 242 (346)
......+|++.+.+..|+.+. ..+.|.+.++........+... . ...|+++|.+.+++++-... +.|...++.- .
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~ 547 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-V 547 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-C
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-C
Confidence 122567888888787777665 4789999998855433333212 1 89999999866466654333 6888888864 2
Q ss_pred cceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 243 APIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 243 ~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
....+ ...-...+.|++++.+..+.++-...+.|...++..
T Consensus 548 -~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 548 -DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp -CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 23333 333357889999987734444545567899888864
No 277
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.46 E-value=1.7e-06 Score=79.70 Aligned_cols=203 Identities=7% Similarity=-0.076 Sum_probs=118.8
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCe
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 144 (346)
...+.+++|.+.+..|+.+ ....+.|..+++..... .......+...-.....+++.+.+..++++-...+.
T Consensus 405 ~~~p~gla~d~~~~~Ly~s---D~~~~~I~~~~~~g~~~-----~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CTTCCCCEEETTTTEEEEC---CTTTTSBEEEESCCCCC------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC
T ss_pred CcceEEEccccccCeEEEE---ecCCCeEEEEecCCCCC-----CcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe
Confidence 3456789999887777775 34557888888762000 011111111112234567887666655555456789
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEccCCCccceeec-cc-eeEEEeCCCC
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEH-AH-VRNVDYDTKK 220 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~-~~-v~~~~~~~~~ 220 (346)
|.++++.... ...+.... ......+++.|.+..|+.+.. .+.|.++++........+.. .. .+.|+|+|++
T Consensus 477 I~v~d~dg~~-~~~l~~~~----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~ 551 (699)
T 1n7d_A 477 VSVADTKGVK-RKTLFREQ----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLS 551 (699)
T ss_dssp EEEEBSSSCC-EEEECCCS----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTT
T ss_pred EEEEecCCCc-eEEEEeCC----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccC
Confidence 9999987432 22221111 124678899997777766553 26788888764332221111 12 7899999987
Q ss_pred CcEEEEecCCCeEEEEEcccCCcceeeecC---CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 221 KHLLVTAADESGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
..++++-...+.|..+|+.. . ..+.+.. .......|++..+ .++++....+.|..++..+
T Consensus 552 ~~LY~aD~~~~~I~~~d~dG-~-~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 552 GRLYWVDSKLHSISSIDVNG-G-NRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp CCEEEEETTTTEEEEECSSS-S-CCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTT
T ss_pred CEEEEEecCCCeEEEEccCC-C-ceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccC
Confidence 65777777778999999864 2 2222221 1122344555443 5566666678899998765
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.45 E-value=7.8e-05 Score=60.95 Aligned_cols=158 Identities=12% Similarity=0.054 Sum_probs=103.0
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeeccc---CCCceeeEEEEe---CCCCCcEEEEec-------
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQS---SGMLHYLSGGAW---DPHDVNAVAATC------- 188 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~---~~~~~~l~~~~~------- 188 (346)
--.+++|.+....++++.-..+.|..|+...+.. ..+..... ......+.++.| .|+++.+++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3457889886664344444689999999874432 22211110 111235689999 688666665431
Q ss_pred ------CCeEEEEEcc---CCCccceeec-----c---------c-eeEEEeCCCCCcEEEEecCC-CeEEEEEcccCCc
Q 019059 189 ------ESSVQFWDLR---SMGKTNSIEH-----A---------H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLKA 243 (346)
Q Consensus 189 ------d~~i~i~d~~---~~~~~~~~~~-----~---------~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~ 243 (346)
+..|..+|+. +++.+..... + . +..++..++|+ ..++++.- +.|...+..- +
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG--~ 169 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADG--K 169 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTS--C
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCC--C
Confidence 5779999999 7776644331 1 2 88999999998 88888777 7777776653 2
Q ss_pred ceeeec------CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 244 PIQELP------GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 244 ~~~~~~------~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.+..+. ......+.|+++|+| .+|++....+.|..+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCC
Confidence 232221 112346799999999 6666665599999999885
No 279
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.43 E-value=4.2e-05 Score=70.25 Aligned_cols=155 Identities=6% Similarity=0.017 Sum_probs=92.7
Q ss_pred EEEeecCCCCcEEEEecCC-------------------eEEEEEcCCCCCCceeeecccCCC----ceeeEEEEeCCCCC
Q 019059 125 CVLWWSSGRHDKLVSIDEE-------------------NIFLWSLDCSNKNAQVQSKQSSGM----LHYLSGGAWDPHDV 181 (346)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~ 181 (346)
.+++.++... ++++..++ .|..+|..+++............. ..+.....+..+++
T Consensus 234 ~~a~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDPELDL-LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 4677777663 55554343 499999998887666554321110 01222122222454
Q ss_pred ---cEEEEecCCeEEEEEccCCCccceeeccc--------------------------------------eeEEEeCCCC
Q 019059 182 ---NAVAATCESSVQFWDLRSMGKTNSIEHAH--------------------------------------VRNVDYDTKK 220 (346)
Q Consensus 182 ---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------------------------------------v~~~~~~~~~ 220 (346)
.++.++.+|.++++|..+++.+....... -..++++|+.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 57777889999999999998763221100 1125677776
Q ss_pred CcEEEEe------------------------------------cCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC
Q 019059 221 KHLLVTA------------------------------------ADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 221 ~~~l~~~------------------------------------~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
. +++.. ..+|.|..||+.+ .+.+-.+..+ .+.....+...+
T Consensus 393 g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~-~~~~~~~~~t~g 469 (668)
T 1kv9_A 393 G-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYP-THWNGGTLSTAG 469 (668)
T ss_dssp T-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEES-SSCCCCEEEETT
T ss_pred C-EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCC-CcEEEEccCC-CCCcCceeEeCC
Confidence 6 43321 1347899999987 4444444322 223333344456
Q ss_pred CcEEEEecCCCeEEEEecCC
Q 019059 265 DGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 265 ~~~l~s~~~d~~i~iwd~~~ 284 (346)
.+++.++.|+.|++||.++
T Consensus 470 -g~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 470 -NLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp -TEEEEECTTSEEEEEETTT
T ss_pred -CEEEEECCcccchhhhhhc
Confidence 6888899999999999998
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=0.00017 Score=67.15 Aligned_cols=206 Identities=7% Similarity=-0.084 Sum_probs=124.7
Q ss_pred cccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC
Q 019059 64 HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE 143 (346)
Q Consensus 64 h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 143 (346)
....+.+|+|.+.+..|+.+ ....+.|..+++..... .......+.........|++.+.+..++++-...+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~s---D~~~~~I~~~~l~g~~~-----~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~ 493 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWS---DLSQRMICSTQLDRAHG-----VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 493 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEeecccCCeeEEe---eccceeEEEEeccCCCC-----CcceeEEEecCCCCcceeeeeecCCcEEEEecCCC
Confidence 44567889999877777765 34567888888762000 01122223223445678899888876566656788
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEccCCCccceeecc-c-eeEEEeCCC
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTK 219 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~ 219 (346)
.|.+.+++... ...+.... .....+|++.|....|+.+.. .+.|...++........+... . .+.|++++.
T Consensus 494 ~I~v~~ldG~~-~~~l~~~~----l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 494 TVSVADTKGVK-RKTLFREN----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLL 568 (791)
T ss_dssp EEEEEETTSSS-EEEEEECT----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETT
T ss_pred eEEEEeCCCCe-EEEEEeCC----CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecC
Confidence 99999987433 22222211 225789999998777777653 368999888754433323222 2 899999987
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcceeeecC--CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCC
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAPIQELPG--HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
+..++++-.....|..+++.- ......+.. .-.....|++.. + .++++-...+.|...|..++
T Consensus 569 ~~~LYwaD~~~~~I~~~d~dG-~~~~~v~~~~~~l~~P~glav~~-~-~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 569 SGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTTC
T ss_pred CCeEEEEeCCCCcEEEEecCC-CceEEEecCCCccCCCCEEEEeC-C-EEEEEECCCCEEEEEeCCCC
Confidence 775666666667899999864 222222222 112344566533 2 55556566778888876653
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=2.4e-05 Score=67.73 Aligned_cols=154 Identities=9% Similarity=0.068 Sum_probs=98.7
Q ss_pred eeEEEEeCC-CCCcEEEEecCCeEEEEEccCCCccceeeccc-eeEEEeCCCCCcEEEEecCCC----eEEEEEcccCCc
Q 019059 170 YLSGGAWDP-HDVNAVAATCESSVQFWDLRSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADES----GIHLWDLRMLKA 243 (346)
Q Consensus 170 ~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~ 243 (346)
....++++| ++..|+++...+.|+.+|+..++......... ...|+|+++++.++++...++ .+.+++....-.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 467889998 46667777665889999998765433333233 999999999984555544322 344444332111
Q ss_pred ceeeecCCCcceEEEEeCC-CCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCcccccccc--ccccccccceeeEE
Q 019059 244 PIQELPGHTHWTWAVCCNP-EYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSL--LNSYSDYEDSVYGL 320 (346)
Q Consensus 244 ~~~~~~~~~~~v~~v~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~ 320 (346)
....+.. ......++++| ++ .++++-..++.|..++... ... +..... ......+
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g-~lyv~d~~~~~V~~~~~~~-------------------~~~~~~~~~~~-~~~P~gi 275 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPING-ELYFNSWNAGQVFRYDFTT-------------------QETTPLFTIQD-SGWEFHI 275 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTC-CEEEEETTTTEEEEEETTT-------------------TEEEEEEECSS-SSCCEEE
T ss_pred eeeeecc-CCCceEEEEeCCCC-EEEEEECCCCEEEEEECCC-------------------CcEEEEEEcCC-CCcceeE
Confidence 1122221 23457788999 66 7777766788999999875 222 222222 2346789
Q ss_pred EeCCCCCcEEEEeecCCeEEEeeec
Q 019059 321 AWSSREPWIFASLSYDGRVRNHMLE 345 (346)
Q Consensus 321 ~~~~~~~~~l~s~~~d~~v~vw~~~ 345 (346)
+|+|++++++++-...+.|..++.+
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCC
Confidence 9999998677777778889988764
No 282
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.34 E-value=0.001 Score=60.40 Aligned_cols=223 Identities=11% Similarity=0.007 Sum_probs=140.2
Q ss_pred CCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeecc
Q 019059 40 EENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAH 119 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~ 119 (346)
..+.|..+++....... ......-..+.+++|.+.+..++.+ ...++.|..++++. ......+...
T Consensus 13 ~~~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~d~~~~~lywt---D~~~~~I~r~~~~g---------~~~~~v~~~g 78 (628)
T 4a0p_A 13 RRADIRRISLETNNNNV--AIPLTGVKEASALDFDVTDNRIYWT---DISLKTISRAFMNG---------SALEHVVEFG 78 (628)
T ss_dssp ETTEEEEEESSCTTCEE--ECCCCSCSCEEEEEEETTTTEEEEE---ETTTTEEEEEETTS---------CSCEEEECSS
T ss_pred eCCcEEEEECCCCCcce--EEEcCCCCceEEEEEECCCCEEEEE---ECCCCeEEEEECCC---------CCcEEEEeCC
Confidence 34678888876543211 1111223467899999988888776 35667888888761 1111222222
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEc
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDL 197 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~ 197 (346)
......+++.+.+..++.+-...+.|.+.+++... ...+... ......++++.|....|+.+.. .+.|...++
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~----~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~ 153 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWK----DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAM 153 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECS----SCCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeC----CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeC
Confidence 24567888887777655555667899999987543 2222211 1235689999997777777652 568888888
Q ss_pred cCCCccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 198 RSMGKTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 198 ~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
........+.... ...|++++++..++++-...+.|..+|+..... ..+.........+++.. + .++++-...+.
T Consensus 154 dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~-~ly~tD~~~~~ 229 (628)
T 4a0p_A 154 DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-D-YIYWTDWSRRS 229 (628)
T ss_dssp TSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-T-EEEEEETTTTE
T ss_pred CCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-C-EEEEecCCCCE
Confidence 7554333232222 899999998775667767778999999875322 33333334456777765 4 56666666788
Q ss_pred EEEEecCCC
Q 019059 277 VNLWLVSTS 285 (346)
Q Consensus 277 i~iwd~~~~ 285 (346)
|...|..++
T Consensus 230 I~~~dk~tg 238 (628)
T 4a0p_A 230 IERANKTSG 238 (628)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 988887664
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00088 Score=62.82 Aligned_cols=235 Identities=12% Similarity=0.004 Sum_probs=134.6
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeee------------eeccCCceEEEEeecCCC
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA------------LDAHVGKINCVLWWSSGR 133 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~~~~~~~~ 133 (346)
..|.++...+++...+.+ ..+.|.+++.... ....... .......|.++...++|.
T Consensus 258 ~~i~~i~~d~~g~lWigt-----~~~Gl~~~~~~~~-------~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~ 325 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIAT-----ELNGIMILDLQQN-------QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN 325 (781)
T ss_dssp CCEEEEEECTTSEEEEEE-----SSSCEEEEETTCC----------------CEEECBCSSTTSBSSSCEEEEEECSSCC
T ss_pred ceEEEEEECCCCCEEEEe-----CCCCeEEECCCCC-------eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC
Confidence 457888777766655443 3345777776521 1111000 012345789998888887
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeec-----ccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccce---
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSK-----QSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNS--- 205 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--- 205 (346)
+-++..++-|..++..+... ...... ........|.++...+++. |.+++.++.|..||..+++....
T Consensus 326 --lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~ 401 (781)
T 3v9f_A 326 --IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKEN 401 (781)
T ss_dssp --EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC---
T ss_pred --EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCC
Confidence 66666677888888765431 111110 1111234688888887665 56666666788999875432211
Q ss_pred --eeccceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec---CCCcceEEEEeCCCCCcEEEEecCCCeEEEE
Q 019059 206 --IEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP---GHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 280 (346)
Q Consensus 206 --~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iw 280 (346)
+....|.++...+++. + ..|..++-+..+|.++ + ....+. .....|.++...+++ .+ ..|+. +-|..|
T Consensus 402 ~~~~~~~v~~i~~d~~g~-l-Wigt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~v~~i~~d~~g-~l-wigt~-~Gl~~~ 474 (781)
T 3v9f_A 402 RELLSNSVLCSLKDSEGN-L-WFGTYLGNISYYNTRL-K-KFQIIELEKNELLDVRVFYEDKNK-KI-WIGTH-AGVFVI 474 (781)
T ss_dssp --CCCSBEEEEEECTTSC-E-EEEETTEEEEEECSSS-C-EEEECCSTTTCCCCEEEEEECTTS-EE-EEEET-TEEEEE
T ss_pred CCCCCcceEEEEECCCCC-E-EEEeccCCEEEEcCCC-C-cEEEeccCCCCCCeEEEEEECCCC-CE-EEEEC-CceEEE
Confidence 1111189999988886 4 4466666788888764 2 233332 134678999888887 54 44444 458889
Q ss_pred ecCCCCCCCCCcccccCCccccccccccccc-----cccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 281 LVSTSNHDELPSESLVESPNQRANSLLNSYS-----DYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 281 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
|..+ ++...... .....|.++...++|. +.+....+| +..|+.
T Consensus 475 ~~~~-------------------~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 475 DLAS-------------------KKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGG-VGIYTP 522 (781)
T ss_dssp ESSS-------------------SSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSC-EEEECT
T ss_pred eCCC-------------------CeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCCC-EEEEeC
Confidence 8876 11111000 1134588999988886 444333244 555554
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.30 E-value=7.3e-06 Score=75.52 Aligned_cols=180 Identities=12% Similarity=0.036 Sum_probs=105.9
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCC---CCCceeeecccC
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCS---NKNAQVQSKQSS 165 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~ 165 (346)
....|++.++. .......+ .....+..++|.+.+..++++-...+.|+.+++.+. .....+...
T Consensus 384 ~~~~I~~id~~---------~~~~~~~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~--- 450 (699)
T 1n7d_A 384 NRHEVRKMTLD---------RSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--- 450 (699)
T ss_dssp CTTC-CEECTT---------SCCEECCS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS---
T ss_pred CccceEEEeCC---------CCcceeee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC---
Confidence 34566777765 22222222 223456788999877754444455789999998751 111111111
Q ss_pred CCceeeEEEEeCCCCCcEEEE-ecCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEecCC-CeEEEEEcccC
Q 019059 166 GMLHYLSGGAWDPHDVNAVAA-TCESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTAADE-SGIHLWDLRML 241 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~ 241 (346)
.......+++.+.+..|+.+ ...+.|.++++........+... . ...|+++|.+.+++++-... +.|.++++..
T Consensus 451 -~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG- 528 (699)
T 1n7d_A 451 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG- 528 (699)
T ss_dssp -CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-
T ss_pred -CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-
Confidence 11245678888666666655 35678999998755433333222 2 88999999766455554333 6788887763
Q ss_pred Ccceeee-cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 242 KAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 242 ~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
. ....+ ...-...+.|+|+|++..++++-+..+.|..+++..
T Consensus 529 ~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 529 V-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp C-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred C-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 2 22222 222345678999998746666666678899999864
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.30 E-value=5.1e-05 Score=69.66 Aligned_cols=241 Identities=8% Similarity=-0.039 Sum_probs=122.2
Q ss_pred EeeecC-CCCceEEEEeecC-------CcceEEEEecCcccCCCCCccceeeeeeec-cCCceEEEEeecCCCCcEEEEe
Q 019059 70 DLSSCP-FDQRIFSTVFSTG-------ESYGAAIWQIPELYGQLNSPQLERIAALDA-HVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 70 ~~~~~~-~~~~l~~~~~~~~-------~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
.+++.| +++.++.+..... ....+.+||... .....+..+.. +.....++++..+++ ++++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t-------~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG 261 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPST-------GIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGG 261 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTT-------CCBCCCEEEECSCCCSSCEEEECTTSC-EEEECS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCC-------CcEEeCcccCCCCCCccccccCCCCCC-EEEeCC
Confidence 456666 5555555421110 012577888762 23333333322 223334567778887 566665
Q ss_pred -cCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe-cC-----CeEEEEEccCCCccce-------e
Q 019059 141 -DEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT-CE-----SSVQFWDLRSMGKTNS-------I 206 (346)
Q Consensus 141 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~-------~ 206 (346)
.+..+.+||..+.. .... . .... ...-.+++..++++.++.|+ .+ ..+.+||..+.+-... +
T Consensus 262 ~~~~~v~~yd~~t~~-W~~~-~-~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~ 337 (656)
T 1k3i_A 262 NDAKKTSLYDSSSDS-WIPG-P-DMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPM 337 (656)
T ss_dssp SSTTCEEEEEGGGTE-EEEC-C-CCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGG
T ss_pred CCCCceEEecCcCCc-eeEC-C-CCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccc
Confidence 35689999988643 1111 1 1111 11223455667888888887 33 5789999987652211 1
Q ss_pred eccceeEEEeCCCCCcEEEEecCC---------CeEEEEEcccCCcceeeecCCC---------cceEEEEeCC-CCCcE
Q 019059 207 EHAHVRNVDYDTKKKHLLVTAADE---------SGIHLWDLRMLKAPIQELPGHT---------HWTWAVCCNP-EYDGF 267 (346)
Q Consensus 207 ~~~~v~~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~---------~~v~~v~~~~-~~~~~ 267 (346)
... -....+..++. +++.|+.+ ..+..||..... -......+. ..-.++.|.. ++ ++
T Consensus 338 ~~~-~~~~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~-w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~-~i 413 (656)
T 1k3i_A 338 LTA-DKQGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSG-DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG-KI 413 (656)
T ss_dssp CCC-CTTGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTC-EEEEEEECEETTEECCCCBTCEEEEEETTTT-EE
T ss_pred ccc-cccceeecCCc-eEEEECCCCcEEEecCccceeeeecCCcc-eeecCCccccccccCCCCCCCceEeccCCCC-eE
Confidence 000 01122334444 55555444 356788877532 111111111 1223444433 55 78
Q ss_pred EEEecCCC-----------eEEEEecCCCCCCCCCcccccCCcccccccccc--ccccccceeeEEEeCCCCCcEEEEee
Q 019059 268 ILSAGTDS-----------TVNLWLVSTSNHDELPSESLVESPNQRANSLLN--SYSDYEDSVYGLAWSSREPWIFASLS 334 (346)
Q Consensus 268 l~s~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~ 334 (346)
++.|+.++ .|.+||..+. ....+. .+.... .-.++...|+++ +++.|+
T Consensus 414 ~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-----------------~W~~~~~~~mp~~R-~~~~~~~l~~g~-i~v~GG 474 (656)
T 1k3i_A 414 LTFGGSPDYQDSDATTNAHIITLGEPGTS-----------------PNTVFASNGLYFAR-TFHTSVVLPDGS-TFITGG 474 (656)
T ss_dssp EEECCBSSSSSSBCCCCEEEEECCSTTSC-----------------CEEEECTTCCSSCC-BSCEEEECTTSC-EEEECC
T ss_pred EEEeCCCCCCCCCcCCcceEEEcCCCCCC-----------------CeeEEccCCCCCCc-ccCCeEECCCCC-EEEECC
Confidence 88887542 5777776650 011111 111111 123445668886 888888
Q ss_pred cC-----------CeEEEeeec
Q 019059 335 YD-----------GRVRNHMLE 345 (346)
Q Consensus 335 ~d-----------~~v~vw~~~ 345 (346)
.+ ..+.+||.+
T Consensus 475 ~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 475 QRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp BSBCCTTCCCSBCCCCEEEEGG
T ss_pred cccCcCcCCCCcccceEEEcCC
Confidence 65 457888864
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.25 E-value=0.0018 Score=58.79 Aligned_cols=218 Identities=11% Similarity=-0.008 Sum_probs=130.1
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCc
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGML 168 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 168 (346)
....|+..+++. ........+ ..-..+..++|.+.+..++.+-..++.|..++++... ...+.... .
T Consensus 13 ~~~~I~~i~l~~-------~~~~~~~~~-~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g----~ 79 (628)
T 4a0p_A 13 RRADIRRISLET-------NNNNVAIPL-TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFG----L 79 (628)
T ss_dssp ETTEEEEEESSC-------TTCEEECCC-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS----C
T ss_pred eCCcEEEEECCC-------CCcceEEEc-CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCC----C
Confidence 445788888872 111111112 1234678999999877655565668899999987543 22222211 1
Q ss_pred eeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeecc-c-eeEEEeCCCCCcEEEEe-cCCCeEEEEEcccCCcc
Q 019059 169 HYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEHA-H-VRNVDYDTKKKHLLVTA-ADESGIHLWDLRMLKAP 244 (346)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~-v~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~ 244 (346)
....++++.+.+..|+.+. ..+.|.+.++........+... . ...|+++|....++++- +..+.|...++.- . .
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG-~-~ 157 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG-S-E 157 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-C-S
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC-C-c
Confidence 2467888887777776665 4678999998754432222111 1 89999999665455554 2356788888764 2 2
Q ss_pred eeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCC
Q 019059 245 IQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSS 324 (346)
Q Consensus 245 ~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 324 (346)
...+...-.....|++++++.++.++-...+.|...|+.. ... ..+...-....++++..
T Consensus 158 ~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG-------------------~~~-~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 158 RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG-------------------LNR-EVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS-------------------CSC-EEEEECCSCEEEEEEET
T ss_pred eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCC-------------------Cce-EEeeccCCCceEEEEEC
Confidence 3333334567789999998735555556677899999875 111 11222222245666654
Q ss_pred CCCcEEEEeecCCeEEEee
Q 019059 325 REPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 325 ~~~~~l~s~~~d~~v~vw~ 343 (346)
+ .++.+-...+.|...|
T Consensus 218 -~-~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 218 -D-YIYWTDWSRRSIERAN 234 (628)
T ss_dssp -T-EEEEEETTTTEEEEEE
T ss_pred -C-EEEEecCCCCEEEEEE
Confidence 3 3666655566666655
No 287
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.25 E-value=7.4e-05 Score=68.58 Aligned_cols=151 Identities=9% Similarity=-0.014 Sum_probs=88.8
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC----CceEEEEeecCCCCcEEEEec------CCeEE
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV----GKINCVLWWSSGRHDKLVSID------EENIF 146 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~------d~~i~ 146 (346)
+..+++. ..|+.|..+|.. +++.+-.+.... ..+.+.-...++. ++++.. ++.|.
T Consensus 117 ~~~v~v~----~~dg~l~alD~~---------tG~~~W~~~~~~~~~~~~~~~~P~v~~~~--v~vg~~~~~~~~~g~v~ 181 (668)
T 1kv9_A 117 GDKVYVG----TLDGRLIALDAK---------TGKAIWSQQTTDPAKPYSITGAPRVVKGK--VIIGNGGAEYGVRGFVS 181 (668)
T ss_dssp BTEEEEE----CTTSEEEEEETT---------TCCEEEEEECSCTTSSCBCCSCCEEETTE--EEECCBCTTTCCBCEEE
T ss_pred CCEEEEE----cCCCEEEEEECC---------CCCEeeeeccCCCCCcceecCCCEEECCE--EEEeCCCCCcCCCCEEE
Confidence 3455553 578899999987 555554443211 1111100011333 555432 58999
Q ss_pred EEEcCCCCCCceeeeccc-CC-------------------------CceeeEEEEeCCCCCcEEEEecCC----------
Q 019059 147 LWSLDCSNKNAQVQSKQS-SG-------------------------MLHYLSGGAWDPHDVNAVAATCES---------- 190 (346)
Q Consensus 147 vwd~~~~~~~~~~~~~~~-~~-------------------------~~~~v~~~~~~~~~~~l~~~~~d~---------- 190 (346)
.+|..+++.......... .. .......+++.|+...++.+..++
T Consensus 182 a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~ 261 (668)
T 1kv9_A 182 AYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSP 261 (668)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHST
T ss_pred EEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCC
Confidence 999998887666543110 00 000112467888778888877665
Q ss_pred ---------eEEEEEccCCCccceeeccc-------------eeEEEeCCCCC--cEEEEecCCCeEEEEEcccCCcce
Q 019059 191 ---------SVQFWDLRSMGKTNSIEHAH-------------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAPI 245 (346)
Q Consensus 191 ---------~i~i~d~~~~~~~~~~~~~~-------------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~ 245 (346)
.|..+|.++++.+-.++..+ ...+.+ +++ ..++.++.+|.++++|.++ ++.+
T Consensus 262 ~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~--~G~~~~~v~~~~~~G~l~~lD~~t-G~~l 337 (668)
T 1kv9_A 262 GGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--DGKPRKVLMQAPKNGFFYVLDRTN-GKLI 337 (668)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--TTEEEEEEEECCTTSEEEEEETTT-CCEE
T ss_pred CCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc--CCcEEEEEEEECCCCEEEEEECCC-CCEe
Confidence 49999999999876665321 122222 342 2588889999999999887 4344
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.21 E-value=0.00052 Score=59.40 Aligned_cols=152 Identities=8% Similarity=-0.053 Sum_probs=90.5
Q ss_pred ceEEEEeecC--CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC-----eEEE
Q 019059 122 KINCVLWWSS--GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES-----SVQF 194 (346)
Q Consensus 122 ~i~~~~~~~~--~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i 194 (346)
....++|.|+ +.. ++.+...+.|+.+|..++.. ..+.. .......+++++++. |+++...+ .+..
T Consensus 140 ~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v-~~~~~-----~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYV-DIKTT-----NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEE-EEECC-----CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEE-EEeec-----CCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 3568999985 332 55552238999999865432 22211 123578999999999 66655321 2333
Q ss_pred EEccCCCcc-ceeeccc-eeEEEeCC-CCCcEEEEecCCCeEEEEEcccCCcceeee-cC-CCcceEEEEeCCCCCc-EE
Q 019059 195 WDLRSMGKT-NSIEHAH-VRNVDYDT-KKKHLLVTAADESGIHLWDLRMLKAPIQEL-PG-HTHWTWAVCCNPEYDG-FI 268 (346)
Q Consensus 195 ~d~~~~~~~-~~~~~~~-v~~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~-~~~~v~~v~~~~~~~~-~l 268 (346)
.+...+... ..+.... ...++++| ++. ++++-..++.|+.+|... ......+ .. .......++|+|++ . +.
T Consensus 212 ~~~~~~~~~~~~~~~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG-~~LY 288 (433)
T 4hw6_A 212 FTRASGFTERLSLCNARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTG-DWAY 288 (433)
T ss_dssp ECGGGTTCCEEEEEECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTS-SEEE
T ss_pred EECCCCeeccccccccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCC-CEEE
Confidence 443322211 1122122 78899999 665 776766778999999874 2221222 11 12233469999999 6 55
Q ss_pred EEecCCCeEEEEecCC
Q 019059 269 LSAGTDSTVNLWLVST 284 (346)
Q Consensus 269 ~s~~~d~~i~iwd~~~ 284 (346)
++-...+.|+.++...
T Consensus 289 vad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 289 IIYNGKHCIYRVDYNR 304 (433)
T ss_dssp EEETTTTEEEEEEBCT
T ss_pred EEeCCCCEEEEEeCCC
Confidence 5556678999988763
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0016 Score=61.17 Aligned_cols=233 Identities=12% Similarity=0.077 Sum_probs=133.7
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeee-------eeccCCceEEEEeecCCCCcEEE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA-------LDAHVGKINCVLWWSSGRHDKLV 138 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~ 138 (346)
..|.++...+++..-+.+ .++.|..++... ........ -......|.++...++|. +.+
T Consensus 313 ~~v~~i~~D~~g~lWigt-----~~~Gl~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWi 378 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWIGT-----WGGGINFISNAP-------PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWI 378 (781)
T ss_dssp SCEEEEEECSSCCEEEEE-----BSSCEEEECSSC-------CSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEE
T ss_pred CeEEEEEEeCCCCEEEEe-----cCCeEEEeCCCC-------CcceeeccCccccccCCCCCcceEEEEEcCCCC--EEE
Confidence 467788877777544443 455677777651 01111100 001235689998888877 566
Q ss_pred EecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee---ccc-eeEE
Q 019059 139 SIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE---HAH-VRNV 214 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~-v~~~ 214 (346)
+..++-|..++..+... ..+. .........|.++...+++. |.+++.++.|..+|..+++...... ... |.++
T Consensus 379 gt~~~Gl~~~~~~~~~~-~~~~-~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 379 GTDGGGINVFENGKRVA-IYNK-ENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp EEBSSCEEEEETTEEEE-ECC------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred EeCCCcEEEEECCCCeE-EEcc-CCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 66567788888764321 1111 11112234688888877665 5556666779999987665322111 112 9999
Q ss_pred EeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec-CC-----CcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCC
Q 019059 215 DYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP-GH-----THWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHD 288 (346)
Q Consensus 215 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~-----~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 288 (346)
...+++. +.+ |.. +-+..+|..+ .. ...+. .. ...|.++...++| .+.+ |+.++-|..||...
T Consensus 456 ~~d~~g~-lwi-gt~-~Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~---- 524 (781)
T 3v9f_A 456 YEDKNKK-IWI-GTH-AGVFVIDLAS-KK-VIHHYDTSNSQLLENFVRSIAQDSEG-RFWI-GTFGGGVGIYTPDM---- 524 (781)
T ss_dssp EECTTSE-EEE-EET-TEEEEEESSS-SS-CCEEECTTTSSCSCSCEEEEEECTTC-CEEE-EESSSCEEEECTTC----
T ss_pred EECCCCC-EEE-EEC-CceEEEeCCC-Ce-EEecccCcccccccceeEEEEEcCCC-CEEE-EEcCCCEEEEeCCC----
Confidence 9998886 444 444 5688898775 22 22221 11 3578899998888 5444 44433477788765
Q ss_pred CCCcccccCCccccccccccccc----cccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 289 ELPSESLVESPNQRANSLLNSYS----DYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
.+. ..+. -....|.++...++|. +.++. .+|.|..|+.
T Consensus 525 ---------------~~~-~~~~~~~~l~~~~i~~i~~d~~g~-lWi~T-~~Glv~~~d~ 566 (781)
T 3v9f_A 525 ---------------QLV-RKFNQYEGFCSNTINQIYRSSKGQ-MWLAT-GEGLVCFPSA 566 (781)
T ss_dssp ---------------CEE-EEECTTTTCSCSCEEEEEECTTSC-EEEEE-TTEEEEESCT
T ss_pred ---------------CeE-EEccCCCCCCCCeeEEEEECCCCC-EEEEE-CCCceEEECC
Confidence 211 1111 1234588999988886 44443 3665466664
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.20 E-value=0.0012 Score=59.88 Aligned_cols=182 Identities=9% Similarity=-0.024 Sum_probs=108.6
Q ss_pred CcceEEEEecCcccCCCCCccce-eeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCC
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLE-RIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGM 167 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 167 (346)
....|+..+++. .. ........-.....++|++.+..++.+-...+.|..++++.......+....
T Consensus 16 ~~~~I~~i~~~~---------~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~---- 82 (619)
T 3s94_A 16 NRRDLRLVDATN---------GKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG---- 82 (619)
T ss_dssp CSSBEEEECCC------------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSS----
T ss_pred ccccEEEEeCCC---------CcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC----
Confidence 556788888862 11 1111222344578999999777655555557889999987542212222211
Q ss_pred ceeeEEEEeCCCCCcEEEEe-cCCeEEEEEccCCCccceeec-cc-eeEEEeCCCCCcEEEEec-CCCeEEEEEcccCCc
Q 019059 168 LHYLSGGAWDPHDVNAVAAT-CESSVQFWDLRSMGKTNSIEH-AH-VRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLKA 243 (346)
Q Consensus 168 ~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~-v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~ 243 (346)
.....++++.+.+..|+.+. ..+.|.+.++........+.. .. ...|+++|.+..++++-- ..+.|...++.- ..
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~ 161 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SS 161 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CS
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-Cc
Confidence 12578899998777777665 478999999885543222211 12 899999998664666542 246777777663 22
Q ss_pred ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 244 PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 244 ~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
........-...+.|++++++.++.++-...+.|...|+..
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 22222223456789999987635555555667888888864
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.18 E-value=0.00024 Score=63.94 Aligned_cols=136 Identities=12% Similarity=0.024 Sum_probs=81.1
Q ss_pred eEEEEEcCCCCCCceeeecccC-----CCceeeEEEEeCCCCC---cEEEEecCCeEEEEEccCCCccceeeccc-----
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSS-----GMLHYLSGGAWDPHDV---NAVAATCESSVQFWDLRSMGKTNSIEHAH----- 210 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----- 210 (346)
.|..+|..+++........... ....++. +...++++ .++.++.+|.++++|..+++.+.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 5889999988766555432211 1111221 22223563 46667789999999999988664433111
Q ss_pred ----------e--------------------------eEEEeCCCCCcEEEEec--------------------------
Q 019059 211 ----------V--------------------------RNVDYDTKKKHLLVTAA-------------------------- 228 (346)
Q Consensus 211 ----------v--------------------------~~~~~~~~~~~~l~~~~-------------------------- 228 (346)
+ ..++++|+.. ++++..
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccce
Confidence 0 2457778776 444432
Q ss_pred -----------CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 229 -----------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 229 -----------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.++.|..||+.+ .+.+-++.. ...+....+...+ .+++.++.|+.|+.+|.++
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~-~~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWE-KFAAWGGTLYTKG-GLVWYATLDGYLKALDNKD 494 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTT-CCEEEEEEE-SSCCCSBCEEETT-TEEEEECTTSEEEEEETTT
T ss_pred eccCccccCCCCCCeEEEEECCC-CCEEEEecC-CCCccceeEEECC-CEEEEEcCCCeEEEEECCC
Confidence 347899999887 434444432 2222222222334 5677789999999999998
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.16 E-value=0.00023 Score=64.00 Aligned_cols=155 Identities=10% Similarity=-0.042 Sum_probs=85.0
Q ss_pred CCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC----CceEEEEeecCCCCcEEEEec------CCeEE
Q 019059 77 DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV----GKINCVLWWSSGRHDKLVSID------EENIF 146 (346)
Q Consensus 77 ~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~------d~~i~ 146 (346)
+..+++. ..|+.|..+|.. +++.+-...... ..+.+--...++. +++++. ++.|.
T Consensus 115 ~~~v~v~----~~dg~l~alD~~---------tG~~~W~~~~~~~~~~~~~~~~P~v~~g~--v~vg~~~~~~~~~g~v~ 179 (571)
T 2ad6_A 115 AGQIVKK----QANGHLLALDAK---------TGKINWEVEVCDPKVGSTLTQAPFVAKDT--VLMGCSGAELGVRGAVN 179 (571)
T ss_dssp TTEEEEE----CTTSEEEEEETT---------TCCEEEEEECCCGGGTCBCCSCCEEETTE--EEEECBCGGGTCCCEEE
T ss_pred CCEEEEE----eCCCEEEEEECC---------CCCEEEEecCCCCCccceeccCCEEECCE--EEEEecCCccCCCCEEE
Confidence 4455553 568889999987 455544332111 0111100111343 555533 78999
Q ss_pred EEEcCCCCCCceeeecccC---------------------------------CCceeeEEEEeCCCCCcEEEEecC----
Q 019059 147 LWSLDCSNKNAQVQSKQSS---------------------------------GMLHYLSGGAWDPHDVNAVAATCE---- 189 (346)
Q Consensus 147 vwd~~~~~~~~~~~~~~~~---------------------------------~~~~~v~~~~~~~~~~~l~~~~~d---- 189 (346)
.+|..+++...+....... +-......+++.++...++.+..+
T Consensus 180 a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~ 259 (571)
T 2ad6_A 180 AFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPW 259 (571)
T ss_dssp EEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCS
T ss_pred EEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccc
Confidence 9999988766555432110 000000134556665666666532
Q ss_pred ------------CeEEEEEccCCCccceeeccc-----------eeEEEeCCCCC--cEEEEecCCCeEEEEEcccCCcc
Q 019059 190 ------------SSVQFWDLRSMGKTNSIEHAH-----------VRNVDYDTKKK--HLLVTAADESGIHLWDLRMLKAP 244 (346)
Q Consensus 190 ------------~~i~i~d~~~~~~~~~~~~~~-----------v~~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~ 244 (346)
+.|..+|.++++.+-.++..+ ..-+...++|+ .+++.++.+|.++++|.++ .+.
T Consensus 260 ~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~ 338 (571)
T 2ad6_A 260 NETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNREN-GNL 338 (571)
T ss_dssp CGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTT-CCE
T ss_pred cCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCC-CCE
Confidence 359999999998776654221 11112223553 2577788899999999887 434
Q ss_pred eee
Q 019059 245 IQE 247 (346)
Q Consensus 245 ~~~ 247 (346)
+..
T Consensus 339 ~w~ 341 (571)
T 2ad6_A 339 IVA 341 (571)
T ss_dssp EEE
T ss_pred Eee
Confidence 433
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.00077 Score=58.78 Aligned_cols=159 Identities=9% Similarity=0.011 Sum_probs=98.2
Q ss_pred ceEEEEeecC-CCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe-------CCCCCcEEEEecCC---
Q 019059 122 KINCVLWWSS-GRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW-------DPHDVNAVAATCES--- 190 (346)
Q Consensus 122 ~i~~~~~~~~-~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~--- 190 (346)
....|+|.|. +..++++....+.|++.|+.++. ...+.. ...........++| ++++..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-v~~l~~-~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-LSSPLN-INTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-EEEEEC-CTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-EEEEEc-cCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 4578999983 55444444444678888887543 222222 11122346889999 99999777776543
Q ss_pred ----eEEEEEccC-CCcc-----ceeec-cceeEEEeCCCCCcEEEEecCCCeEEEEEcc-------cCCc-----c---
Q 019059 191 ----SVQFWDLRS-MGKT-----NSIEH-AHVRNVDYDTKKKHLLVTAADESGIHLWDLR-------MLKA-----P--- 244 (346)
Q Consensus 191 ----~i~i~d~~~-~~~~-----~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~-------~~~~-----~--- 244 (346)
.|.+++... +... ..+.. .+...++.+|++.+++++-..++.|..+|+. .... +
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 366676443 2221 12221 1278889999666588888888999999987 3221 0
Q ss_pred --eee-ec-CCCcceEEEEeCCCCCcE-EEEecCCCeEEEEecC
Q 019059 245 --IQE-LP-GHTHWTWAVCCNPEYDGF-ILSAGTDSTVNLWLVS 283 (346)
Q Consensus 245 --~~~-~~-~~~~~v~~v~~~~~~~~~-l~s~~~d~~i~iwd~~ 283 (346)
... +. +.......|+|+|+| .. .++-+....|+.++..
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G-~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTG-KYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTS-SEEEEEETTTTEEEEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCC-CEEEEEeCCCCEEEEEecC
Confidence 111 11 123456889999999 64 5555667789987654
No 294
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.10 E-value=0.0021 Score=57.96 Aligned_cols=159 Identities=11% Similarity=0.002 Sum_probs=89.3
Q ss_pred eeecCCCCc----eEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC----CceEE-EEeecCCCCcEEEEe-
Q 019059 71 LSSCPFDQR----IFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV----GKINC-VLWWSSGRHDKLVSI- 140 (346)
Q Consensus 71 ~~~~~~~~~----l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~-~~~~~~~~~~~~~~~- 140 (346)
++++|.+.. +++. ..|+.|.-+|.. +++.+-...... ..+.+ ... .++. +++++
T Consensus 111 ~av~p~~g~~~~rV~v~----t~dg~l~AlDa~---------TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~--V~vg~~ 174 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKT----QLDGNVAALNAE---------TGETVWKVENSDIKVGSTLTIAPYV-VKDK--VIIGSS 174 (599)
T ss_dssp CEEECCCSSSCCEEEEE----CTTSEEEEEETT---------TCCEEEEEECCCGGGTCBCCSCCEE-ETTE--EEECCB
T ss_pred eEEEecCCcceeEEEEE----cCCCEEEEEECC---------CCCEEEeecCCCCCccceeecCCEE-ECCE--EEEEec
Confidence 445444444 6553 578888888887 455543332211 01111 111 2343 55553
Q ss_pred -----cCCeEEEEEcCCCCCCceeeecccCC---------------------------------CceeeEEEEeCCCCCc
Q 019059 141 -----DEENIFLWSLDCSNKNAQVQSKQSSG---------------------------------MLHYLSGGAWDPHDVN 182 (346)
Q Consensus 141 -----~d~~i~vwd~~~~~~~~~~~~~~~~~---------------------------------~~~~v~~~~~~~~~~~ 182 (346)
.++.|+-+|..+++...+........ -...-...++.+....
T Consensus 175 g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~ 254 (599)
T 1w6s_A 175 GAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNL 254 (599)
T ss_dssp CGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTE
T ss_pred ccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCE
Confidence 37899999999887665554322100 0000012345566667
Q ss_pred EEEEecC----------------CeEEEEEccCCCccceeeccc--e---------eEEEeC-CCCC--cEEEEecCCCe
Q 019059 183 AVAATCE----------------SSVQFWDLRSMGKTNSIEHAH--V---------RNVDYD-TKKK--HLLVTAADESG 232 (346)
Q Consensus 183 l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~--v---------~~~~~~-~~~~--~~l~~~~~dg~ 232 (346)
++.+..+ +.|..+|.++++.+-.++..+ . .-+... .+|+ .+++.++.+|.
T Consensus 255 vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~ 334 (599)
T 1w6s_A 255 IYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGI 334 (599)
T ss_dssp EEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSE
T ss_pred EEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcE
Confidence 7777654 379999999998876665322 1 111221 4562 26777889999
Q ss_pred EEEEEcccCCccee
Q 019059 233 IHLWDLRMLKAPIQ 246 (346)
Q Consensus 233 i~i~d~~~~~~~~~ 246 (346)
++++|.++ .+++.
T Consensus 335 l~~lD~~t-G~~lw 347 (599)
T 1w6s_A 335 VYTLDRTD-GALVS 347 (599)
T ss_dssp EEEEETTT-CCEEE
T ss_pred EEEEECCC-CCEee
Confidence 99999887 44443
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.09 E-value=0.0032 Score=52.87 Aligned_cols=234 Identities=9% Similarity=0.037 Sum_probs=124.9
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeee---ccCCceEEEEeecC---CCCcEEEE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALD---AHVGKINCVLWWSS---GRHDKLVS 139 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~---~~~~~~~~ 139 (346)
.....++|.|+++.+++- .++.|.+++.. .. +.+..+. ........|+++|+ +..++++-
T Consensus 29 ~~P~~ia~~pdG~l~V~e-----~~g~I~~~d~~--------G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTE-----RPGRLVLISPS--------GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp SCEEEEEEEETTEEEEEE-----TTTEEEEECSS--------CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCeEEEEcCCCeEEEEe-----CCCEEEEEeCC--------Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 456889999998755442 45788888632 01 2222221 22346789999998 55444444
Q ss_pred ec---C----CeEEEEEcCCCC-CC---ceeeecccCCCceeeEEEEeCCCCCcEEEEec-------------CCeEEEE
Q 019059 140 ID---E----ENIFLWSLDCSN-KN---AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQFW 195 (346)
Q Consensus 140 ~~---d----~~i~vwd~~~~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~ 195 (346)
.. + ..|..|+..... .. ..+..............++|.|++...++.+. .+.|.-+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri 174 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRV 174 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEE
Confidence 42 3 577778776431 00 11111011111224567999999975555432 1456666
Q ss_pred EccCCC-------ccceeeccc--eeEEEeCC-CCCcEEEEecCCC---eEEEEEccc---------------CCcceee
Q 019059 196 DLRSMG-------KTNSIEHAH--VRNVDYDT-KKKHLLVTAADES---GIHLWDLRM---------------LKAPIQE 247 (346)
Q Consensus 196 d~~~~~-------~~~~~~~~~--v~~~~~~~-~~~~~l~~~~~dg---~i~i~d~~~---------------~~~~~~~ 247 (346)
+....- ....+..++ ...++|+| ++. ++++-.... .|.+...-. ...++..
T Consensus 175 ~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 253 (354)
T 3a9g_A 175 DEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVID 253 (354)
T ss_dssp CTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred cCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEee
Confidence 654320 112233344 88999999 565 555533222 233322110 0123333
Q ss_pred ecCCCcceEEEEeC-------CCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccc--cc-ccccccee
Q 019059 248 LPGHTHWTWAVCCN-------PEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLL--NS-YSDYEDSV 317 (346)
Q Consensus 248 ~~~~~~~v~~v~~~-------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~v 317 (346)
+.........+.|. .+| .++++.-..+.|...++... ++.. .. +.+....+
T Consensus 254 ~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~------------------g~~~~~~~~~~~~~~rp 314 (354)
T 3a9g_A 254 TGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDN------------------MEVRKISTFFKNVFGRL 314 (354)
T ss_dssp CTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGG------------------GCEEEEEEECTTTSCCE
T ss_pred cCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCC------------------CcccceeeeccCCCCCe
Confidence 31122356777773 456 67776666778888887640 1110 11 22223458
Q ss_pred eEEEeCCCCCcEEEEee
Q 019059 318 YGLAWSSREPWIFASLS 334 (346)
Q Consensus 318 ~~~~~~~~~~~~l~s~~ 334 (346)
.++++.|+|. ++++..
T Consensus 315 ~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 315 RDVVIDDDGG-ILISTS 330 (354)
T ss_dssp EEEEECTTSC-EEEEEC
T ss_pred eEEEECCCCc-EEEEEe
Confidence 9999999997 666554
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.09 E-value=0.0013 Score=54.97 Aligned_cols=175 Identities=7% Similarity=0.026 Sum_probs=102.4
Q ss_pred CcceEEEEecCcccCCCCCccceeeeeeec-----cCCceEEEEeec--CCC-CcEEEEec--CCeEEEEEcCCCCCCce
Q 019059 89 ESYGAAIWQIPELYGQLNSPQLERIAALDA-----HVGKINCVLWWS--SGR-HDKLVSID--EENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 89 ~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~--~~~-~~~~~~~~--d~~i~vwd~~~~~~~~~ 158 (346)
.+|.|.++|..+... +.+.+. +.+ ..-....+.+.+ ++. +++++-.. +..|.+|+++.......
T Consensus 81 ~~G~I~~~d~~~~~~-----~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~ 154 (355)
T 3sre_A 81 KSGKILLMDLNEKEP-----AVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL 154 (355)
T ss_dssp -CCEEEEEETTSSSC-----CEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEE
T ss_pred CCCeEEEEecCCCCC-----ceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEE
Confidence 578899999862111 122222 222 234667888766 344 34444422 57889998876544333
Q ss_pred eeecccCCCceeeEEEEeCCCCCcEEEEe-----------------cCCeEEEEEccCCCccceeeccc--eeEEEeCCC
Q 019059 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAAT-----------------CESSVQFWDLRSMGKTNSIEHAH--VRNVDYDTK 219 (346)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~~~~--v~~~~~~~~ 219 (346)
.............+.+++.++|...++.. ..|.|..+|. ++ ...+..+- .+.++|+|+
T Consensus 155 ~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spD 231 (355)
T 3sre_A 155 HLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPD 231 (355)
T ss_dssp EEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTT
T ss_pred EEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCC
Confidence 33322222344678999999888666543 1245555554 33 22222222 899999999
Q ss_pred CCcEEEEecCCCeEEEEEcccCCcc--eeeecCCCcceEEEEeCC-CCCcEEEEecCC
Q 019059 220 KKHLLVTAADESGIHLWDLRMLKAP--IQELPGHTHWTWAVCCNP-EYDGFILSAGTD 274 (346)
Q Consensus 220 ~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~v~~~~-~~~~~l~s~~~d 274 (346)
++.++++-+..+.|..|++...+.. .+.+ ......-.+++.+ +| .+.+++..+
T Consensus 232 g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G-~lwva~~~~ 287 (355)
T 3sre_A 232 GKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG-DLWVGCHPN 287 (355)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC-CEEEEEESC
T ss_pred CCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC-cEEEEecCC
Confidence 9866777677789999998743321 1233 2245567788888 58 666655433
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.09 E-value=0.0027 Score=57.58 Aligned_cols=225 Identities=10% Similarity=-0.030 Sum_probs=129.3
Q ss_pred CCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccC
Q 019059 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHV 120 (346)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~ 120 (346)
.+.|..+++..... ........-..+.+++|++.+..|+.+ .-..+.|..++++. .......+...-
T Consensus 17 ~~~I~~i~~~~~~~--~~~~~~~~~~~~~~ld~~~~~~~ly~s---D~~~~~I~r~~~~g--------~~~~~~v~~~~~ 83 (619)
T 3s94_A 17 RRDLRLVDATNGKE--NATIVVGGLEDAAAVDFVFSHGLIYWS---DVSEEAIKRTEFNK--------TESVQNVVVSGL 83 (619)
T ss_dssp SSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEE---ETTTTEEEEEEC-------------CEEEECSSC
T ss_pred cccEEEEeCCCCcc--eEEEEEcCCCceEEEEEEeCCCEEEEE---ECCCCeEEEEEccC--------CCceEEEEeCCC
Confidence 45666666654321 111222334567899999988877775 34556788888761 111112222223
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec--CCeEEEEEcc
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC--ESSVQFWDLR 198 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~ 198 (346)
.....+++.+.+..++++-...+.|.+.+++... ...+... ......++++.|.+..|+.+.. .+.|...++.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~----~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQ----ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS----SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeC----CCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 5678999998777655555668999999987533 2222221 1225678999998777776653 4677777776
Q ss_pred CCCccceee-ccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 199 SMGKTNSIE-HAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 199 ~~~~~~~~~-~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
......... ... .+.|++++++..++++-...+.|..+|+.... ......+.......|++..+ .++.+-...+.
T Consensus 159 G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~ 235 (619)
T 3s94_A 159 GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLFED--ILYWTDWSTHS 235 (619)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE-EC---------CCCEEESSS--EEEEECTTTCS
T ss_pred CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc-cEEEEeCCCCCceEEEEeCC--EEEEecCCCCE
Confidence 433322221 112 89999999776566666677889999886422 11111111222345666544 45555556778
Q ss_pred EEEEecCCCC
Q 019059 277 VNLWLVSTSN 286 (346)
Q Consensus 277 i~iwd~~~~~ 286 (346)
|...|..++.
T Consensus 236 V~~~d~~tg~ 245 (619)
T 3s94_A 236 ILACNKYTGE 245 (619)
T ss_dssp EEEEESSSCC
T ss_pred EEEEECCCCc
Confidence 8888887643
No 298
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.09 E-value=0.0021 Score=62.51 Aligned_cols=234 Identities=11% Similarity=0.156 Sum_probs=136.0
Q ss_pred CCCCcceEEEeecccCCCCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccC
Q 019059 24 ADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYG 103 (346)
Q Consensus 24 ~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~ 103 (346)
..-++.++++-.-..+..+++.++++...+... + .+-.--+.-.+|..+.++.- ...+++|+|++
T Consensus 30 ~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~--r----rpi~AdsAIMnP~~~iiALr-----ag~~lQiFnl~---- 94 (1630)
T 1xi4_A 30 LTMESDKFICIREKVGEQAQVVIIDMNDPSNPI--R----RPISADSAIMNPASKVIALK-----AGKTLQIFNIE---- 94 (1630)
T ss_pred eeeecCceEEEEecCCCCceEEEEECCCCCCcc--c----ccccchhhccCCCcceEEEe-----cCCeEEEeehH----
Confidence 344555666665555666788888888754432 1 12122234568866544442 35699999998
Q ss_pred CCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcE
Q 019059 104 QLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNA 183 (346)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 183 (346)
....+..+.- ...|.--.|-.... +.+++ +..|+-|++.....+.+.......-....|..-..+++.+++
T Consensus 95 -----~k~klks~~~-~e~VvfWkWis~~~-l~lVT--~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~ 165 (1630)
T 1xi4_A 95 -----MKSKMKAHTM-TDDVTFWKWISLNT-VALVT--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWL 165 (1630)
T ss_pred -----Hhhhhccccc-CCCceEEEecCCCe-eEEEc--CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeE
Confidence 4444444432 45688888877766 34444 689999999764444444333322123467777788888887
Q ss_pred EEEec-------CCeEEEEEccCCCccceeeccc---eeEEEe--CCCCCcEEEEecC---CCeEEEEEcccC--Ccc--
Q 019059 184 VAATC-------ESSVQFWDLRSMGKTNSIEHAH---VRNVDY--DTKKKHLLVTAAD---ESGIHLWDLRML--KAP-- 244 (346)
Q Consensus 184 ~~~~~-------d~~i~i~d~~~~~~~~~~~~~~---v~~~~~--~~~~~~~l~~~~~---dg~i~i~d~~~~--~~~-- 244 (346)
+..|- .|.+.+|..+.+.. ....+| ...+.. .+....+++.+.. .+.++|.++... +.+
T Consensus 166 ~l~gi~~~~~~v~G~mQLyS~er~~s--Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f 243 (1630)
T 1xi4_A 166 LLTGISAQQNRVVGAMQLYSVDRKVS--QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF 243 (1630)
T ss_pred EEEeeccCCCcccceeeeeecccccc--hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC
Confidence 76542 47888888775432 122255 111111 1222223333322 268999988643 111
Q ss_pred ----eeeecC---CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 245 ----IQELPG---HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 245 ----~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+..+.. ...-..++..++.. ..+...+.-|.|.+||+.+
T Consensus 244 ~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 244 PKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred ccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEeccc
Confidence 111111 12223456677777 7888888899999999999
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.09 E-value=0.0009 Score=55.27 Aligned_cols=183 Identities=14% Similarity=0.183 Sum_probs=112.2
Q ss_pred CCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecC----CCC--cEEEEe-c--CCeEEEEEcCCCCCCce
Q 019059 88 GESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSS----GRH--DKLVSI-D--EENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 88 ~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~--~~~~~~-~--d~~i~vwd~~~~~~~~~ 158 (346)
...+.+.+||+. ++.++.+.. +.++.+..-|. |+. +++++. . +++|.+|+++.......
T Consensus 47 ~k~~gL~Vydl~----------G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 47 NKKSGLVVYSLD----------GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp ETTTEEEEEETT----------SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred cCCCCEEEEcCC----------CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 356789999995 567776643 56777776663 221 344553 3 58999998853222222
Q ss_pred eeec---ccCCCceeeEEEEe--CCCCC--cEEEEecCCeEEEEEcc-------CCCccceeeccc-eeEEEeCCCCCcE
Q 019059 159 VQSK---QSSGMLHYLSGGAW--DPHDV--NAVAATCESSVQFWDLR-------SMGKTNSIEHAH-VRNVDYDTKKKHL 223 (346)
Q Consensus 159 ~~~~---~~~~~~~~v~~~~~--~~~~~--~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~-v~~~~~~~~~~~~ 223 (346)
.... ........++.+++ +|... ++++...+|.+..|++. +.+.++++..+. +..++..+... .
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g-~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG-R 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT-E
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC-e
Confidence 1110 00011136777887 77543 57777788999999983 234566666555 88999998777 7
Q ss_pred EEEecCCCeEEEEEcccC----Ccceeeec-CC-CcceEEEEe--CCCCCcEEEEec-CCCeEEEEecC
Q 019059 224 LVTAADESGIHLWDLRML----KAPIQELP-GH-THWTWAVCC--NPEYDGFILSAG-TDSTVNLWLVS 283 (346)
Q Consensus 224 l~~~~~dg~i~i~d~~~~----~~~~~~~~-~~-~~~v~~v~~--~~~~~~~l~s~~-~d~~i~iwd~~ 283 (346)
|+.+-++.-|..+|.+.. ...+..+. ++ ...+..|++ .+++..+|++++ .++++.+||.+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 888888876777775421 12333321 22 246777877 566532454444 67899999997
No 300
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.09 E-value=0.00068 Score=61.08 Aligned_cols=167 Identities=10% Similarity=0.031 Sum_probs=96.5
Q ss_pred CeEEEEEcCCCCCCceeeecccCC-----CceeeEEEEeC-CCCC---cEEEEecCCeEEEEEccCCCccceeeccc---
Q 019059 143 ENIFLWSLDCSNKNAQVQSKQSSG-----MLHYLSGGAWD-PHDV---NAVAATCESSVQFWDLRSMGKTNSIEHAH--- 210 (346)
Q Consensus 143 ~~i~vwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--- 210 (346)
+.|.-+|..+++............ ...++. +... .+++ .++.++.+|.++++|.++++.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 589999999888766654432110 111221 1221 3564 57778889999999999988664433210
Q ss_pred --------------------------------------------eeEEEeCCCCCcEEEEec------------------
Q 019059 211 --------------------------------------------VRNVDYDTKKKHLLVTAA------------------ 228 (346)
Q Consensus 211 --------------------------------------------v~~~~~~~~~~~~l~~~~------------------ 228 (346)
-..++++|+.. ++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTS
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCC
Confidence 11346666665 343321
Q ss_pred ---------------CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcc
Q 019059 229 ---------------DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSE 293 (346)
Q Consensus 229 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 293 (346)
.+|.|..||+.+.+ .+-+.... .++..-.....+ .+++.++.|+.++.||.++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~-~~W~~~~~-~~~~~g~~~tag-glvf~g~~dg~l~A~D~~t--------- 516 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGK-VVWEHKEH-LPLWAGVLATAG-NLVFTGTGDGYFKAFDAKS--------- 516 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCC-EEEEEEES-SCCCSCCEEETT-TEEEEECTTSEEEEEETTT---------
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCC-EEEEecCC-CCCcccceEeCC-CEEEEECCCCcEEEEECCC---------
Confidence 25788899988743 44333321 122211111234 5777899999999999998
Q ss_pred cccCCcccccccccccccccccee-eEEEeCCCCCcEEEEe
Q 019059 294 SLVESPNQRANSLLNSYSDYEDSV-YGLAWSSREPWIFASL 333 (346)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~s~ 333 (346)
++.+-.+......+ .-+.|..+|+.++++.
T Consensus 517 ----------G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 517 ----------GKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp ----------CCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ----------CCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 78777665433211 2256666776444433
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.04 E-value=0.0038 Score=51.82 Aligned_cols=233 Identities=12% Similarity=0.061 Sum_probs=118.2
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCe
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEEN 144 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 144 (346)
...+.++.|.| + .+.++ +..+.|.. ..+. ..+.+.+.....+...+..+.+.+++. +++.+.++.
T Consensus 79 ~~~~~~i~~~~-~-~~~~~----g~~g~i~~--S~Dg-----G~tW~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~g~ 143 (327)
T 2xbg_A 79 DYRFNSVSFQG-N-EGWIV----GEPPIMLH--TTDG-----GQSWSQIPLDPKLPGSPRLIKALGNGS--AEMITNVGA 143 (327)
T ss_dssp CCEEEEEEEET-T-EEEEE----EETTEEEE--ESST-----TSSCEECCCCTTCSSCEEEEEEEETTE--EEEEETTCC
T ss_pred CccEEEEEecC-C-eEEEE----ECCCeEEE--ECCC-----CCCceECccccCCCCCeEEEEEECCCC--EEEEeCCcc
Confidence 34688899876 3 34443 24444332 2210 112333222112334567788777665 455555665
Q ss_pred EEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEE-EEccCCCccceeec--cc-eeEEEeCCCC
Q 019059 145 IFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQF-WDLRSMGKTNSIEH--AH-VRNVDYDTKK 220 (346)
Q Consensus 145 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i-~d~~~~~~~~~~~~--~~-v~~~~~~~~~ 220 (346)
| |....+.......... ....+..+.+.|++..++++ .++.+.. .|- .++.-..+.. .. +..+++.+++
T Consensus 144 v--~~S~DgG~tW~~~~~~---~~~~~~~~~~~~~~~~~~~g-~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g 216 (327)
T 2xbg_A 144 I--YRTKDSGKNWQALVQE---AIGVMRNLNRSPSGEYVAVS-SRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDG 216 (327)
T ss_dssp E--EEESSTTSSEEEEECS---CCCCEEEEEECTTSCEEEEE-TTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTS
T ss_pred E--EEEcCCCCCCEEeecC---CCcceEEEEEcCCCcEEEEE-CCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCC
Confidence 4 3333323233333322 23367889999987655544 4555444 332 1222222221 22 8889999988
Q ss_pred CcEEEEecCCCeEEEEEcccCCcceeeec----CCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCccccc
Q 019059 221 KHLLVTAADESGIHLWDLRMLKAPIQELP----GHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLV 296 (346)
Q Consensus 221 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 296 (346)
. +++ ++.+|.+++.+... ......+. .+...+..+.+.+++ .+++++. ++.| .+....+
T Consensus 217 ~-~~~-~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g~-~g~i-~~S~DgG----------- 279 (327)
T 2xbg_A 217 R-LWM-IVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPN-EVWLAGG-AGAL-LCSQDGG----------- 279 (327)
T ss_dssp C-EEE-EETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSS-CEEEEES-TTCE-EEESSTT-----------
T ss_pred C-EEE-EeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCC-EEEEEeC-CCeE-EEeCCCC-----------
Confidence 6 554 44568877764221 11111111 122458889999877 6666554 6666 3333320
Q ss_pred CCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEee
Q 019059 297 ESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHM 343 (346)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~ 343 (346)
.....+.........+.++.|.+++ .+++++.+|.|.-++
T Consensus 280 -----~tW~~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 -----QTWQQDVDVKKVPSNFYKILFFSPD--QGFILGQKGILLRYV 319 (327)
T ss_dssp -----SSCEECGGGTTSSSCCCEEEEEETT--EEEEECSTTEEEEEC
T ss_pred -----cccEEcCccCCCCCCeEEEEEECCC--ceEEEcCCceEEEEc
Confidence 0022222111223457888887554 456677788876654
No 302
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.96 E-value=0.003 Score=56.97 Aligned_cols=63 Identities=10% Similarity=-0.059 Sum_probs=38.8
Q ss_pred CeEEEEEcCCCCCCceeeecccCC-----CceeeEEEEeC-CCC---CcEEEEecCCeEEEEEccCCCcccee
Q 019059 143 ENIFLWSLDCSNKNAQVQSKQSSG-----MLHYLSGGAWD-PHD---VNAVAATCESSVQFWDLRSMGKTNSI 206 (346)
Q Consensus 143 ~~i~vwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (346)
+.|..+|.++++............ ...++. +... .++ ..++.++.+|.++++|.++++.+...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 478999999887666555432111 011111 2221 456 35666778999999999999866443
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.94 E-value=0.0024 Score=52.72 Aligned_cols=187 Identities=12% Similarity=0.166 Sum_probs=111.1
Q ss_pred CcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC----CCCc--EEEEe-c---CCeEEEEEcc--CCC
Q 019059 134 HDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP----HDVN--AVAAT-C---ESSVQFWDLR--SMG 201 (346)
Q Consensus 134 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~~-~---d~~i~i~d~~--~~~ 201 (346)
.+++++...+-+.+||+ +++....+.. + .++.+..-| .++. ++.++ . +++|.+|++. ++
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~----g---~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~- 111 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT----G---KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG- 111 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC----S---CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC----C---CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-
Confidence 34666677889999999 4554433321 1 344444433 2222 33443 3 5789999773 33
Q ss_pred ccceee-------cc-c-eeEEEe--CCC-CCcEEEEecCCCeEEEEEcccC------CcceeeecCCCcceEEEEeCCC
Q 019059 202 KTNSIE-------HA-H-VRNVDY--DTK-KKHLLVTAADESGIHLWDLRML------KAPIQELPGHTHWTWAVCCNPE 263 (346)
Q Consensus 202 ~~~~~~-------~~-~-v~~~~~--~~~-~~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~v~~v~~~~~ 263 (346)
.+..+. .. . +..+++ +|. +..++++...+|.+..|++... .+.++++.. ...+..+...+.
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~ 190 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDE 190 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETT
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCC
Confidence 233331 11 2 777777 774 4445777778899999988431 235666664 456778888888
Q ss_pred CCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccc-cc-cceeeEEEe--CCCCC-cEEEEeecCCe
Q 019059 264 YDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYS-DY-EDSVYGLAW--SSREP-WIFASLSYDGR 338 (346)
Q Consensus 264 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~~l~s~~~d~~ 338 (346)
. ..|+.+-+|.-|..++.+.... ...+.+..+. ++ ...+..|++ .++++ ++|+++-.+.+
T Consensus 191 ~-g~Lyv~eEd~GIw~~da~p~~~--------------~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 191 Y-GRLYIAEEDEAIWKFSAEPDGG--------------SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp T-TEEEEEETTTEEEEEECSTTSC--------------SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred C-CeEEEecccceEEEEeCCcCCC--------------CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 7 7899999886665555442000 0023333331 22 234777777 45555 46666667889
Q ss_pred EEEeeec
Q 019059 339 VRNHMLE 345 (346)
Q Consensus 339 v~vw~~~ 345 (346)
+.+|+.+
T Consensus 256 ~~Vydr~ 262 (355)
T 3amr_A 256 YAIYDRQ 262 (355)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999875
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.94 E-value=0.0065 Score=50.99 Aligned_cols=149 Identities=11% Similarity=0.018 Sum_probs=79.8
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeee----eeccCCceEEEEeecC---CCCcEEE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA----LDAHVGKINCVLWWSS---GRHDKLV 138 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~---~~~~~~~ 138 (346)
.....|+|.|+++.++++ ...+.|.+++.+.. ..+.+.. ..........++++|+ +..++++
T Consensus 18 ~~P~~i~~~pdG~~l~V~----e~~G~i~~~~~~g~-------~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT----LRGGELRHWQAGKG-------LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEE----ETTTEEEEEETTTE-------ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEE----eCCceEEEEeCCCc-------eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456789999999844443 24678888874310 0011111 1122345689999996 5544444
Q ss_pred Eec-------CCeEEEEEcCCCCC----Cceeeeccc--CCCceeeEEEEeCCCCCcEEEEec-------------CCeE
Q 019059 139 SID-------EENIFLWSLDCSNK----NAQVQSKQS--SGMLHYLSGGAWDPHDVNAVAATC-------------ESSV 192 (346)
Q Consensus 139 ~~~-------d~~i~vwd~~~~~~----~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i 192 (346)
-.. ...|..+++..... ...+..... .........++|.|++.+.++.+. .+.|
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 332 23566677653311 111111111 011123467999999965555433 2467
Q ss_pred EEEEccCCC------------ccceeeccc--eeEEEeCC-CCCcEEEE
Q 019059 193 QFWDLRSMG------------KTNSIEHAH--VRNVDYDT-KKKHLLVT 226 (346)
Q Consensus 193 ~i~d~~~~~------------~~~~~~~~~--v~~~~~~~-~~~~~l~~ 226 (346)
.-+|....- ....+..++ ...++|+| ++. ++++
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~~ 214 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWLN 214 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEEE
Confidence 777765321 223333344 89999999 564 5544
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.83 E-value=0.0066 Score=49.71 Aligned_cols=159 Identities=10% Similarity=0.021 Sum_probs=99.5
Q ss_pred eEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec----c--CCceEEEEe---ecCCCCcEEE
Q 019059 68 IWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----H--VGKINCVLW---WSSGRHDKLV 138 (346)
Q Consensus 68 v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----~--~~~i~~~~~---~~~~~~~~~~ 138 (346)
-.+++|.+....+..+ .-..+.|..|+... .....+ .+.. . ...+..+.| .|+++ ++++
T Consensus 15 PE~~~wd~~~g~~~vs---~l~~g~V~~~~~~~-------~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv 82 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQS---NLYKGRIEVYNPKT-------QSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAV 82 (334)
T ss_dssp CSCEEEETTTTEEEEE---ETTTTEEEEECTTT-------CCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEE
T ss_pred CcCccCcCCCCEEEEE---eccCCEEEEEcCCC-------CeEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEE
Confidence 3468998866666664 23578999998761 111222 2321 1 113578999 57765 4443
Q ss_pred Ee-------------cCCeEEEEEcC---CCCCCceeeecccC-C-------CceeeEEEEeCCCCCcEEEEecC-CeEE
Q 019059 139 SI-------------DEENIFLWSLD---CSNKNAQVQSKQSS-G-------MLHYLSGGAWDPHDVNAVAATCE-SSVQ 193 (346)
Q Consensus 139 ~~-------------~d~~i~vwd~~---~~~~~~~~~~~~~~-~-------~~~~v~~~~~~~~~~~l~~~~~d-~~i~ 193 (346)
.. .+..|..+|+. +++........... + .......++..++|+..++.+.. +.|.
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~ 162 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIA 162 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEE
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEE
Confidence 32 15789999998 66654443321100 0 11358899999999988888877 7777
Q ss_pred EEEccCCCccceee--c--cc----eeEEEeCCCCCcEEEEecCCCeEEEEEccc
Q 019059 194 FWDLRSMGKTNSIE--H--AH----VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (346)
Q Consensus 194 i~d~~~~~~~~~~~--~--~~----v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (346)
..+.... ....+. . .. .+.|+++|++. +|++....+.+..+|++.
T Consensus 163 rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 163 RVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEECSS
T ss_pred EEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcCCC
Confidence 7776643 222211 1 11 77999999998 555554599999999885
No 306
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.83 E-value=0.0038 Score=56.22 Aligned_cols=56 Identities=16% Similarity=-0.032 Sum_probs=36.9
Q ss_pred CeEEEEEccCCCccceeeccc--------eeE---EEeC-CCCC--cEEEEecCCCeEEEEEcccCCccee
Q 019059 190 SSVQFWDLRSMGKTNSIEHAH--------VRN---VDYD-TKKK--HLLVTAADESGIHLWDLRMLKAPIQ 246 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~--------v~~---~~~~-~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~ 246 (346)
+.|..+|.++++.+-.++..+ +.. +... .+|+ .+++.++.+|.++++|.++ .+++.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw 360 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN-GKLQN 360 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT-CCEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC-CCEec
Confidence 589999999999877665321 111 1111 3553 2678889999999999887 43443
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.79 E-value=0.0042 Score=51.83 Aligned_cols=155 Identities=10% Similarity=0.070 Sum_probs=88.3
Q ss_pred eEEEEeecCCCCcEEEEe-------------cCCeEEEEEcCCCCC-Cceeeecc--cCCCceeeEEEEeCC--CCC-cE
Q 019059 123 INCVLWWSSGRHDKLVSI-------------DEENIFLWSLDCSNK-NAQVQSKQ--SSGMLHYLSGGAWDP--HDV-NA 183 (346)
Q Consensus 123 i~~~~~~~~~~~~~~~~~-------------~d~~i~vwd~~~~~~-~~~~~~~~--~~~~~~~v~~~~~~~--~~~-~l 183 (346)
.-.+...|+|. +++++ .+|.|.++|..+... ...+.... .....-...++.+.+ ++. +|
T Consensus 52 ~EDi~~~~~G~--~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILPNGL--AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECTTSE--EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcCCCe--EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 44566777765 44443 589999999874322 22222211 111122456666654 343 35
Q ss_pred EEEe-c--CCeEEEEEccCCCccc----eeeccc---eeEEEeCCCCCcEEEEec-----------------CCCeEEEE
Q 019059 184 VAAT-C--ESSVQFWDLRSMGKTN----SIEHAH---VRNVDYDTKKKHLLVTAA-----------------DESGIHLW 236 (346)
Q Consensus 184 ~~~~-~--d~~i~i~d~~~~~~~~----~~~~~~---v~~~~~~~~~~~~l~~~~-----------------~dg~i~i~ 236 (346)
+++. . +..+.+|++....... .+.... .+.+++.++|. ++++.. ..|.|..+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 5543 2 5688888877543222 222111 89999999997 566543 12455555
Q ss_pred EcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 237 DLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 237 d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
|.. .++.+...-...+.++|+|++..+.++-+..+.|..|++..
T Consensus 209 d~~----~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 209 SPN----DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp CTT----CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ECC----eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 542 23333323345689999999933444555678999999874
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.73 E-value=0.012 Score=47.86 Aligned_cols=237 Identities=13% Similarity=0.135 Sum_probs=133.2
Q ss_pred CceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCc
Q 019059 78 QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNA 157 (346)
Q Consensus 78 ~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 157 (346)
...+++....+.+..|.+-|+.. ..++.+.-...++. -.+|..+ ++|--....+.++|+++..+..
T Consensus 36 DkyicVrE~~~~~~~VvIiDl~n--------~~~~~Rrpi~AdsA----IMnP~~~--ViALrag~~LQiFnletK~klk 101 (365)
T 2xzh_A 36 DKFICIREKVGEQAQVVIIDMND--------PSNPIRRPISADSA----IMNPASK--VIALKAGKTLQIFNIEMKSKMK 101 (365)
T ss_dssp TTEEEEEEEETTEEEEEEEETTS--------TTSCEEEECCCSEE----EECSSSS--EEEEEETTEEEEEETTTTEEEE
T ss_pred CceEEEEecCCCCCEEEEEECCC--------CCCcccccccccee----eeCCCcc--EEEEecCCeEEEechHHhhhhc
Confidence 34445444345556788899873 11222221122322 3478776 4444337899999999765444
Q ss_pred eeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC-ccceeeccc------eeEEEeCCCCCcEEEEec--
Q 019059 158 QVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH------VRNVDYDTKKKHLLVTAA-- 228 (346)
Q Consensus 158 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~------v~~~~~~~~~~~~l~~~~-- 228 (346)
..... ..|.-=.|-.+ +.|+..+ +..|+-|++.... +.+.+.... |..-..+++.++++++|-
T Consensus 102 s~~~~------e~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~ 173 (365)
T 2xzh_A 102 AHTMT------DDVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISA 173 (365)
T ss_dssp EEECS------SCEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEE
T ss_pred ceecC------CccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEec
Confidence 43332 26666677643 3444444 5689999998543 444443211 777888999986666654
Q ss_pred ----CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC--CcEEEEecCC---CeEEEEecCCCCCCCCCcccccCCc
Q 019059 229 ----DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY--DGFILSAGTD---STVNLWLVSTSNHDELPSESLVESP 299 (346)
Q Consensus 229 ----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~ 299 (346)
-.|.+.+|..+. ..-+.+++|......+.+..+. ..+|+-+... +.++|-++........ ..+
T Consensus 174 ~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~------~f~ 245 (365)
T 2xzh_A 174 QQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ------PFP 245 (365)
T ss_dssp ETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCC------CCC
T ss_pred cCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCC------Ccc
Confidence 236788999874 3567788887766555443221 1344444332 5889988865200000 000
Q ss_pred cccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 300 NQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 300 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
+..-+..+.-..-.+-..++..++.-. ++.....-|.+++||++.
T Consensus 246 -kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleT 290 (365)
T 2xzh_A 246 -KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET 290 (365)
T ss_dssp -CEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT
T ss_pred -cccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEccc
Confidence 000000011111123345677777665 777778889999999863
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.64 E-value=0.013 Score=49.15 Aligned_cols=100 Identities=15% Similarity=0.057 Sum_probs=60.7
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec-ccCCCceeeEEEEeCCC---CCcEEEEec-C-----Ce
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK-QSSGMLHYLSGGAWDPH---DVNAVAATC-E-----SS 191 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~ 191 (346)
....++|.|+|+ ++++...+.|.+++ . +. ...+... ...........++++|+ +..|+++.. . ..
T Consensus 32 ~P~~ia~~pdG~--l~V~e~~g~I~~i~-~-g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGG--MLIAERPGRIRLFR-E-GR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSC--EEEEETTTEEEEEE-T-TE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCe--EEEEeCCCeEEEEE-C-CC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 457999999998 55555569999998 2 22 1111111 01111336789999998 556665543 2 67
Q ss_pred EEEEEccCCC-----ccc-eee----ccc-eeEEEeCCCCCcEEEEe
Q 019059 192 VQFWDLRSMG-----KTN-SIE----HAH-VRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 192 i~i~d~~~~~-----~~~-~~~----~~~-v~~~~~~~~~~~~l~~~ 227 (346)
|..++...+. .+. .+. ..| ...++|.|+|. ++++.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~ 152 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTT 152 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEEC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEE
Confidence 8888876432 111 122 123 77899999996 66664
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.59 E-value=0.011 Score=50.14 Aligned_cols=149 Identities=9% Similarity=0.108 Sum_probs=92.0
Q ss_pred CCCeEEEEEecCCCCeEEEeeeec--cccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCC----ccceee
Q 019059 40 EENEVHLLRLSSGGTELICEGLFS--HPNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNS----PQLERI 113 (346)
Q Consensus 40 ~~~~i~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~----~~~~~~ 113 (346)
.++.++...+.++....... ... --+.|..+..+|+|.+|+.. .+..|.|-.++........ ...+ .
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~-~~~~i~f~~i~qlvlSpsG~lLAl~-----g~~~V~Vv~LP~~~~~~~~~~~~~~~q-~ 111 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLN-FSRHLVLDDTFHVISSTSGDLLCLF-----NDNEIFVMEVPWGYSNVEDVSIQDAFQ-I 111 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEE-CTTTCCCCTTCEEEECTTSSEEEEE-----CSSEEEEEECCTTCSCCCCHHHHHTTE-E
T ss_pred ECCEEEEEECCCCCcceEEe-cCcccccCceeEEEECCCCCEEEEe-----cCCeEEEEEecCccccCcccccccccc-e
Confidence 46788888888654322211 111 12367889999999988886 5568999998843222111 1111 1
Q ss_pred eeeec------cCCceEEEEeecCCCC--cEEEEecCCeEEEEEcCCCCCCceeeecc-----cCCCceeeEEEEeCCCC
Q 019059 114 AALDA------HVGKINCVLWWSSGRH--DKLVSIDEENIFLWSLDCSNKNAQVQSKQ-----SSGMLHYLSGGAWDPHD 180 (346)
Q Consensus 114 ~~~~~------~~~~i~~~~~~~~~~~--~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~ 180 (346)
+.+.- ...+|..+.|+|-+.. .+++-..|+.|++||+...........+. .......+.+++|.+++
T Consensus 112 ~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~ 191 (452)
T 3pbp_A 112 FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG 191 (452)
T ss_dssp EEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS
T ss_pred eEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC
Confidence 23322 2567999999997542 35555679999999998633222211111 11223578899999988
Q ss_pred CcEEEEe--cCCeEEEE
Q 019059 181 VNAVAAT--CESSVQFW 195 (346)
Q Consensus 181 ~~l~~~~--~d~~i~i~ 195 (346)
-.|.+.+ .+|.|+-.
T Consensus 192 lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 192 LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCEEEEECTTSCEEEEE
T ss_pred cEEEEEecCCCCCEEEE
Confidence 7788865 67888754
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.58 E-value=0.025 Score=47.40 Aligned_cols=102 Identities=18% Similarity=0.068 Sum_probs=61.1
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecc-cCCCceeeEEEEeCCC---CCcEEEEec----C---
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ-SSGMLHYLSGGAWDPH---DVNAVAATC----E--- 189 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~~~~----d--- 189 (346)
.....++|.|+|+ ++++..++.|++++. .+. ..+.... ..........++++|+ +..|+++.. +
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4568999999998 566655699999873 232 1111110 0111235789999997 555655543 2
Q ss_pred -CeEEEEEccCCC-------cc-ceee--ccc-eeEEEeCCCCCcEEEEec
Q 019059 190 -SSVQFWDLRSMG-------KT-NSIE--HAH-VRNVDYDTKKKHLLVTAA 228 (346)
Q Consensus 190 -~~i~i~d~~~~~-------~~-~~~~--~~~-v~~~~~~~~~~~~l~~~~ 228 (346)
..|..|+..... .+ ..+. ..| ...|+|.|+|. ++++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEEC
Confidence 567778776541 11 1122 123 67899999997 666643
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.58 E-value=0.0062 Score=46.56 Aligned_cols=101 Identities=8% Similarity=-0.064 Sum_probs=62.6
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceeeccc---------eeEEEeCCCCCcEEEEecCCCeEEEEEccc
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIEHAH---------VRNVDYDTKKKHLLVTAADESGIHLWDLRM 240 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 240 (346)
.+..++|+|++. |.++ .+|.++-.+..+.....-+..+. -..+.|.|++. +.++ .||.|+-++..+
T Consensus 42 ~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCcc-EEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCc
Confidence 677999999777 4444 78888777765533222111111 38899999997 6555 569998777533
Q ss_pred CCcc-e----eee-cCCCcceEEEEeCCCCCcEEEEecCCCeEE
Q 019059 241 LKAP-I----QEL-PGHTHWTWAVCCNPEYDGFILSAGTDSTVN 278 (346)
Q Consensus 241 ~~~~-~----~~~-~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~ 278 (346)
.... . ..+ ..-=..+..|.+.|+| .+.+.. |+.++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~ly 157 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFY 157 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEE
Confidence 1210 0 111 1111467999999999 655555 77743
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.50 E-value=0.035 Score=47.14 Aligned_cols=236 Identities=12% Similarity=0.129 Sum_probs=133.5
Q ss_pred ceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCce
Q 019059 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 158 (346)
..+++....+....|.|-|+.. ...+.+.-..-+ +.-.+|..+ +++--....+.++|+++..+...
T Consensus 36 kyicVrE~~~~~~~vvIiDl~~--------~~~~~rrpi~Ad----sAIMnP~~~--iiALrag~~lQiFnle~K~klks 101 (494)
T 1bpo_A 36 KFICIREKVGEQAQVVIIDMND--------PSNPIRRPISAD----SAIMNPASK--VIALKAGKTLQIFNIEMKSKMKA 101 (494)
T ss_dssp TEEEEEECCTTCCEEEEEETTS--------TTSCEEEECCCS----EEEECSSSS--CEEEEETTEEEEEETTTTEEEEE
T ss_pred ceEEEEecCCCCCeEEEEECCC--------CCcceecccccc----eeeeCCCCc--EEEEecCCeEEEEchHHhhhhcc
Confidence 3444443344555788889873 112222111222 334677776 44443378999999997654444
Q ss_pred eeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC-ccceeeccc------eeEEEeCCCCCcEEEEec---
Q 019059 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHAH------VRNVDYDTKKKHLLVTAA--- 228 (346)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~------v~~~~~~~~~~~~l~~~~--- 228 (346)
....+ .|.-=.|-. .+.|+.. .+..|+-|++.... +.+.+.... |..-..+++.++++++|-
T Consensus 102 ~~~~e------~VvfWkWis-~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 173 (494)
T 1bpo_A 102 HTMTD------DVTFWKWIS-LNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (494)
T ss_dssp EECSS------CCCEEEEEE-TTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEE
T ss_pred eecCC------CceEEEecC-CCeEEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeeccc
Confidence 33322 455556653 2344444 36789999997543 444444211 778888999986666554
Q ss_pred ---CCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCC--CcEEEEecCC---CeEEEEecCCCCCCCCCcccccCCcc
Q 019059 229 ---DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEY--DGFILSAGTD---STVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 229 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
-.|.+.+|..+. ..-+.+.+|......+.+..+. ..+++-+... +.++|-++........ ..+
T Consensus 174 ~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~------~f~- 244 (494)
T 1bpo_A 174 QNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ------PFP- 244 (494)
T ss_dssp TTEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCC------CCC-
T ss_pred CCcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCC------Ccc-
Confidence 236788999874 3567788888777666554322 1345544443 6899999865200000 000
Q ss_pred ccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
+...+..+.-..-.+-..++..++... ++.....-|.+++||++.
T Consensus 245 kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 245 KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET 289 (494)
T ss_dssp CEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTT
T ss_pred ceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEeccc
Confidence 000000011111123345677887765 777888889999999863
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.39 E-value=0.043 Score=45.58 Aligned_cols=239 Identities=9% Similarity=0.051 Sum_probs=122.5
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee----eccCCceEEEEeecC---CCCcEE
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----DAHVGKINCVLWWSS---GRHDKL 137 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~---~~~~~~ 137 (346)
-...+.|+|.|++..+++- -..+.|.+++... .....+..+ .........|+++|+ +..+++
T Consensus 31 L~~P~~ia~~pdG~llVte----r~~G~I~~v~~~~-------g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSS----RDEATITRVDAKT-------GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp CSSEEEEEECTTSCEEEEE----TTTCEEEEECTTT-------CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred CCCceEEEEcCCCcEEEEE----ecCCEEEEEECCC-------CcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 4567899999999766553 2377888886431 111222222 123456789999985 343333
Q ss_pred EEe--cCCeEEEEEcCCCC----C---CceeeecccCCCceeeEEEEeCCCCCcEEEEec-------------CCeEEEE
Q 019059 138 VSI--DEENIFLWSLDCSN----K---NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-------------ESSVQFW 195 (346)
Q Consensus 138 ~~~--~d~~i~vwd~~~~~----~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~ 195 (346)
+-+ .++.|.-|.+.... . ...+.........+....++|.|++.+.++.+. .|.|.-.
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi 179 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM 179 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE
Confidence 322 35667777765421 1 111111111112224567999999976666542 2556555
Q ss_pred EccCCC-------ccceeeccc--eeEEEeCCCCCcEEEEec-CCCeEEEEEcccCC-----------------cceeee
Q 019059 196 DLRSMG-------KTNSIEHAH--VRNVDYDTKKKHLLVTAA-DESGIHLWDLRMLK-----------------APIQEL 248 (346)
Q Consensus 196 d~~~~~-------~~~~~~~~~--v~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-----------------~~~~~~ 248 (346)
+....- ....+..++ ...++|+|++. ++++-. .++.-.|--++... .++..+
T Consensus 180 ~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~ 258 (347)
T 3das_A 180 TPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW 258 (347)
T ss_dssp CTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE
T ss_pred eCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec
Confidence 654220 112333355 88999999887 555432 23222222222211 123333
Q ss_pred cCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCc
Q 019059 249 PGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPW 328 (346)
Q Consensus 249 ~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 328 (346)
..+......++|.. + .++...-..+.|....+.... ...+....+.+....+.+|+..|+|.
T Consensus 259 ~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~---------------~~~~~e~~l~~~~gR~~dv~~~pDG~- 320 (347)
T 3das_A 259 STDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTA---------------AAADPQAFLEGEYGRLRTVAPAGGDK- 320 (347)
T ss_dssp CTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTE---------------ESSCCEEESTTTSSCEEEEEEEETTE-
T ss_pred CCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCc---------------eecceEEeecCCCCCccEEEECCCCc-
Confidence 32223456666653 4 455544444555555554300 00111122333345689999999997
Q ss_pred EEEEe
Q 019059 329 IFASL 333 (346)
Q Consensus 329 ~l~s~ 333 (346)
++++.
T Consensus 321 lyv~t 325 (347)
T 3das_A 321 LWLVT 325 (347)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 315
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.39 E-value=0.049 Score=46.17 Aligned_cols=147 Identities=7% Similarity=-0.002 Sum_probs=93.3
Q ss_pred eecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcc----
Q 019059 128 WWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKT---- 203 (346)
Q Consensus 128 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---- 203 (346)
.+.+|..++++ .++.||.-++.... ..+.......-.-..+..+..+|+|.+|+..+ +..|.|..+..+...
T Consensus 28 ~~~n~t~i~~a--~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 28 SSQNGTRIVFI--QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp EETTTTEEEEE--ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EEcCCCEEEEE--ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccc
Confidence 34556643443 36889988887543 23332222100112567799999999888876 557889888843211
Q ss_pred --------ceeecc------c--eeEEEeCCCCCc--EEEEecCCCeEEEEEccc-CCcceeeec---------CCCcce
Q 019059 204 --------NSIEHA------H--VRNVDYDTKKKH--LLVTAADESGIHLWDLRM-LKAPIQELP---------GHTHWT 255 (346)
Q Consensus 204 --------~~~~~~------~--v~~~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~---------~~~~~v 255 (346)
+.+..+ . |..+.|+|-+.. .|++-..|+.|++||+.. ...|. .+. .....|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 122211 2 999999997653 688888999999999985 22233 332 122568
Q ss_pred EEEEeCCCCCcEEEEe--cCCCeEEEE
Q 019059 256 WAVCCNPEYDGFILSA--GTDSTVNLW 280 (346)
Q Consensus 256 ~~v~~~~~~~~~l~s~--~~d~~i~iw 280 (346)
.+++|.+++ -.|+.. +..|.|+-.
T Consensus 183 ~S~~Fg~~~-lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDG-LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTS-SCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCC-cEEEEEecCCCCCEEEE
Confidence 899999977 766664 477877654
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.13 E-value=0.059 Score=43.98 Aligned_cols=140 Identities=4% Similarity=-0.072 Sum_probs=77.4
Q ss_pred EEeecCCCCcEEEEecC-------------CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe----c
Q 019059 126 VLWWSSGRHDKLVSIDE-------------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT----C 188 (346)
Q Consensus 126 ~~~~~~~~~~~~~~~~d-------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~ 188 (346)
--+++++.++..+...+ ..|+..+++..+ ....... .+..|+++++.|+-.. .
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~~--------~~~~~s~~g~~Iy~~~~~~~~ 127 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDPD--------PCIYASLIGNYIYYLHYDTQT 127 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEECS--------CEEEEEEETTEEEEEEESSSS
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeecC--------CccEEEEeCCEEEEEeecCCC
Confidence 45688899877666433 467777776543 2222211 1236677888888776 2
Q ss_pred CCeEEEEEccCCCccceeeccceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEE
Q 019059 189 ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l 268 (346)
...|+..++... ....+....+ .+++++++.++.+......|.+.++.. .. .+.+.. .... ..+.|++ .+|
T Consensus 128 ~~~Iy~~~~dGs-~~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~-~~~l~~--~~~~-~~~~P~g-~~i 198 (302)
T 3s25_A 128 ATSLYRIRIDGE-EKKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTAS-QS-EALFYD--CNCY-KPVVLDD-TNV 198 (302)
T ss_dssp CEEEEEEETTSC-CCEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTT-TE-EEEEEC--SCEE-EEEEEET-TEE
T ss_pred CceEEEEECCCC-CeEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCC-CC-EEEEeC--CCcc-ceeeecC-CEE
Confidence 445666666643 3333432224 567788886666655567888888764 32 223322 2222 2356888 555
Q ss_pred EEecC-C-CeEEEEecCC
Q 019059 269 LSAGT-D-STVNLWLVST 284 (346)
Q Consensus 269 ~s~~~-d-~~i~iwd~~~ 284 (346)
+-... + ..|..-++..
T Consensus 199 y~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEEGGGTTEEEEECSSS
T ss_pred EEEEcCCCcEEEEEECCC
Confidence 54433 3 2455545543
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.94 E-value=0.028 Score=42.99 Aligned_cols=133 Identities=7% Similarity=-0.079 Sum_probs=73.4
Q ss_pred CCcEEEEecCCeEEEEEccCCC------ccceeecc--c-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC
Q 019059 180 DVNAVAATCESSVQFWDLRSMG------KTNSIEHA--H-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG 250 (346)
Q Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~--~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 250 (346)
...|++..+| +++.=....+. ....+-.. + +..++|+|++. +.++ .+|.++-.+..+.. . ..+.+
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~-~-~~W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHD-N-DNWMG 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCST-T-CCHHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCC-c-ccccc
Confidence 4456666666 66665554444 12223321 1 88999999887 6666 66777666654311 1 11111
Q ss_pred CCcc--------eEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCCCcccccCCccccccccccc--c--ccccceee
Q 019059 251 HTHW--------TWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDELPSESLVESPNQRANSLLNS--Y--SDYEDSVY 318 (346)
Q Consensus 251 ~~~~--------v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~v~ 318 (346)
.... ..++.|.|+| .+.++ .||.|+-++-.+.. ...-+.. . ..--..+.
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~----------------~~~Wl~~a~~vg~~gw~~~~ 138 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASPPQSD----------------TDNWIARATEVGSGGWSGFK 138 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESCCCST----------------TCCHHHHSEEEECSSGGGEE
T ss_pred cccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCCCcCC----------------CCceeccccEeccCCCCceE
Confidence 1112 4788999999 66655 56888766643200 0011110 0 11113478
Q ss_pred EEEeCCCCCcEEEEeecCCeEE
Q 019059 319 GLAWSSREPWIFASLSYDGRVR 340 (346)
Q Consensus 319 ~~~~~~~~~~~l~s~~~d~~v~ 340 (346)
.|.+.|+|. +.+.. |+.++
T Consensus 139 ~lff~p~G~-Lyav~--dg~ly 157 (236)
T 1tl2_A 139 FLFFHPNGY-LYAVH--GQQFY 157 (236)
T ss_dssp EEEECTTSC-EEEEE--TTEEE
T ss_pred EEEECCCce-EEEEe--CCcEE
Confidence 999999996 55444 77653
No 318
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.88 E-value=0.14 Score=42.22 Aligned_cols=188 Identities=6% Similarity=-0.025 Sum_probs=98.2
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccC
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRS 199 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (346)
...+.++.|.+.+. +++.+..+.|. ...+.++ ..+............+..+.+.+ ..+++++..+.|.. ....
T Consensus 35 ~~~~~~v~~~~~~~--~~~~G~~g~i~-~s~DgG~-tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHH--GWLVGVNATLM-ETRDGGQ-TWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSC--EEEEETTTEEE-EESSTTS-SCEECCCCCSCCCCEEEEEEEET--TEEEEEEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCc--EEEEcCCCeEE-EeCCCCC-CCeECCCCCCCCCccEEEEEecC--CeEEEEECCCeEEE-ECCC
Confidence 34688998876665 44455667653 3333333 33332211111233688888876 34555566675543 3333
Q ss_pred CCccceeec-----cceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeee-cCCCcceEEEEeCCCCCcEEEEecC
Q 019059 200 MGKTNSIEH-----AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQEL-PGHTHWTWAVCCNPEYDGFILSAGT 273 (346)
Q Consensus 200 ~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~v~~~~~~~~~l~s~~~ 273 (346)
++.-..+.. +.+..+.+.+++. +++++. ++.|. -.......-... ......+..+.+.|++ .+++.+..
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~-~g~v~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 182 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGS-AEMITN-VGAIY--RTKDSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVSSR 182 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTE-EEEEET-TCCEE--EESSTTSSEEEEECSCCCCEEEEEECTTS-CEEEEETT
T ss_pred CCCceECccccCCCCCeEEEEEECCCC-EEEEeC-CccEE--EEcCCCCCCEEeecCCCcceEEEEEcCCC-cEEEEECC
Confidence 332222111 1266777766665 565554 45442 222112222222 2345578899999988 77777654
Q ss_pred CCeEEEEec--CCCCCCCCCcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEe
Q 019059 274 DSTVNLWLV--STSNHDELPSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNH 342 (346)
Q Consensus 274 d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw 342 (346)
.+..+-.|- .+ .+.+.. .....+..+.+.+++. ++ .++.+|.+++.
T Consensus 183 G~~~~S~d~gG~t-------------------W~~~~~--~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s 230 (327)
T 2xbg_A 183 GSFYSTWEPGQTA-------------------WEPHNR--TTSRRLHNMGFTPDGR-LW-MIVNGGKIAFS 230 (327)
T ss_dssp SSEEEEECTTCSS-------------------CEEEEC--CSSSCEEEEEECTTSC-EE-EEETTTEEEEE
T ss_pred CcEEEEeCCCCCc-------------------eeECCC--CCCCccceeEECCCCC-EE-EEeCCceEEEe
Confidence 444444443 22 232221 2334578888888875 44 44456766665
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.85 E-value=0.14 Score=41.57 Aligned_cols=140 Identities=9% Similarity=0.000 Sum_probs=70.1
Q ss_pred CcEEEEecC-----CeEEEEEcCCCCCC-ceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCCCc
Q 019059 134 HDKLVSIDE-----ENIFLWSLDCSNKN-AQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGK 202 (346)
Q Consensus 134 ~~~~~~~~d-----~~i~vwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 202 (346)
.+++.++.+ ..+.+||+.+.... ..... ...........+.+ ++..++.++.+ ..+.+||+.+.+-
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~-~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA-PMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC-CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECC-CCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 356666543 46889998765410 12211 11111112222222 45556666532 4688999887653
Q ss_pred cc--eeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEcccCCcceeeecCC---CcceEEEEeCCCCCcEEEE
Q 019059 203 TN--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPGH---THWTWAVCCNPEYDGFILS 270 (346)
Q Consensus 203 ~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~---~~~v~~v~~~~~~~~~l~s 270 (346)
.. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+. ....+... ......+.+ ++ .+++.
T Consensus 141 ~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~i~v~ 212 (301)
T 2vpj_A 141 SMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVALL--ND-HIYVV 212 (301)
T ss_dssp EEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TT-EEEEE
T ss_pred EECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEEE--CC-EEEEE
Confidence 22 111111 222222 454 77777654 45888998752 12222211 111122222 45 67777
Q ss_pred ecCC-----CeEEEEecCC
Q 019059 271 AGTD-----STVNLWLVST 284 (346)
Q Consensus 271 ~~~d-----~~i~iwd~~~ 284 (346)
|+.+ ..+.+||+.+
T Consensus 213 GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp CCBCSSSBCCCEEEEETTT
T ss_pred eCCCCCcccceEEEEeCCC
Confidence 7764 4688899876
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.76 E-value=0.13 Score=41.70 Aligned_cols=138 Identities=9% Similarity=-0.017 Sum_probs=67.8
Q ss_pred CcEEEEecC-----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCCCcc
Q 019059 134 HDKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSMGKT 203 (346)
Q Consensus 134 ~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 203 (346)
.+++.++.+ ..+.+||..+.+ ...... ..........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQ--WTSVAN-MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTE--EEEECC-CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred EEEEEeCcCCCccccceEEECCCCCc--eeeCCC-CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 356666543 458888887543 111111 1111112222222 45666666644 35778898876522
Q ss_pred c--eeeccc--eeEEEeCCCCCcEEEEecCC-------CeEEEEEcccCCcceeeec---CCCcceEEEEeCCCCCcEEE
Q 019059 204 N--SIEHAH--VRNVDYDTKKKHLLVTAADE-------SGIHLWDLRMLKAPIQELP---GHTHWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 204 ~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~l~ 269 (346)
. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+.. ...+. ........+.+ ++ .+++
T Consensus 138 ~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~-~iyv 209 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV--GGL-LYAVGGYDVASRQCLSTVECYNATTNE--WTYIAEMSTRRSGAGVGVL--NN-LLYA 209 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTE-EEEECCEETTTTEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TT-EEEE
T ss_pred ecCCCCCcccCceEEEE--CCE-EEEEeCCCCCCCccccEEEEEeCCCCc--EEECCCCccccccccEEEE--CC-EEEE
Confidence 1 111111 222222 444 77776542 358889987521 22221 11111122222 45 6777
Q ss_pred EecCC-----CeEEEEecCC
Q 019059 270 SAGTD-----STVNLWLVST 284 (346)
Q Consensus 270 s~~~d-----~~i~iwd~~~ 284 (346)
.|+.+ ..+.+||..+
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTT
T ss_pred ECCCCCCcccceEEEEeCCC
Confidence 77764 3688888876
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.76 E-value=0.18 Score=43.84 Aligned_cols=102 Identities=9% Similarity=0.160 Sum_probs=57.3
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccc--eeec-------cc-eeEEEeCCC---CCcEEEEecC-------
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN--SIEH-------AH-VRNVDYDTK---KKHLLVTAAD------- 229 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~-------~~-v~~~~~~~~---~~~~l~~~~~------- 229 (346)
....++|.|+++.+++-...+.|++++..+++... .+.. .. +..|+|+|+ +..++++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45789999999855544333478888765554321 1110 12 779999995 4435554432
Q ss_pred -----CCeEEEEEcccCC------cce-eeec-CCCcceEEEEeCCCCCcEEEEec
Q 019059 230 -----ESGIHLWDLRMLK------API-QELP-GHTHWTWAVCCNPEYDGFILSAG 272 (346)
Q Consensus 230 -----dg~i~i~d~~~~~------~~~-~~~~-~~~~~v~~v~~~~~~~~~l~s~~ 272 (346)
...|.-++..... +.+ ..+. ........|.|.|+| .+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 2356666554211 111 1122 112357889999999 6665544
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.70 E-value=0.26 Score=42.73 Aligned_cols=111 Identities=8% Similarity=-0.066 Sum_probs=60.1
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec------cCCceEEEEeecC---CCCcE
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA------HVGKINCVLWWSS---GRHDK 136 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~---~~~~~ 136 (346)
...+.|+|.|+++.+++- ...+.|.+++... .....+..+.. .......|+|+|+ +..++
T Consensus 27 ~~P~~~a~~pdG~l~V~e----~~gg~I~~~~~~~-------g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTE----RATGKILRVNPES-------GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp SSEEEEEECTTSCEEEEE----TTTCEEEEECTTT-------CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred CCceEEEEcCCCcEEEEE----cCCCEEEEEECCC-------CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 456799999999866653 2223577766431 11222222211 2456779999996 55445
Q ss_pred EEEec------------CCeEEEEEcCCCCC----CceeeecccCCCceeeEEEEeCCCCCcEEEEe
Q 019059 137 LVSID------------EENIFLWSLDCSNK----NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (346)
Q Consensus 137 ~~~~~------------d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (346)
++.+. ...|..+++..... ...+.........+....++|.|++.+.++.+
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 54442 23566666543211 11111111111123578999999998766655
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.70 E-value=0.18 Score=40.94 Aligned_cols=172 Identities=10% Similarity=0.018 Sum_probs=82.9
Q ss_pred cceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC----CeEEEEEcCCCCCCceeeecccC
Q 019059 90 SYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE----ENIFLWSLDCSNKNAQVQSKQSS 165 (346)
Q Consensus 90 d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d----~~i~vwd~~~~~~~~~~~~~~~~ 165 (346)
...+.+||... .....+..+.........+. -++. +++.++.+ ..+.+||+.+.+ ...+... .
T Consensus 23 ~~~~~~~d~~~-------~~W~~~~~~p~~r~~~~~~~--~~~~-lyv~GG~~~~~~~~~~~~d~~~~~-W~~~~~~--p 89 (306)
T 3ii7_A 23 PQSCRYFNPKD-------YSWTDIRCPFEKRRDAACVF--WDNV-VYILGGSQLFPIKRMDCYNVVKDS-WYSKLGP--P 89 (306)
T ss_dssp TTSEEEEETTT-------TEEEECCCCSCCCBSCEEEE--ETTE-EEEECCBSSSBCCEEEEEETTTTE-EEEEECC--S
T ss_pred CceEEEecCCC-------CCEecCCCCCcccceeEEEE--ECCE-EEEEeCCCCCCcceEEEEeCCCCe-EEECCCC--C
Confidence 34677888762 23333333322222222222 2344 56676644 678889987653 1122111 1
Q ss_pred CCceeeEEEEeCCCCCcEEEEecC------CeEEEEEccCCCccc--eeeccc--eeEEEeCCCCCcEEEEecC------
Q 019059 166 GMLHYLSGGAWDPHDVNAVAATCE------SSVQFWDLRSMGKTN--SIEHAH--VRNVDYDTKKKHLLVTAAD------ 229 (346)
Q Consensus 166 ~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~------ 229 (346)
........+.+ ++..++.|+.+ ..+.+||+.+.+-.. .+..+. ...+.+ ++. +++.|+.
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGL-IYVCGGSLGNNVS 164 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCEESCTTT
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCE-EEEECCCCCCCCc
Confidence 11112222222 45666666643 468899988765221 121111 222222 444 6776653
Q ss_pred ---CCeEEEEEcccCCcceeeecCCC---cceEEEEeCCCCCcEEEEecCC-----CeEEEEecCC
Q 019059 230 ---ESGIHLWDLRMLKAPIQELPGHT---HWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (346)
Q Consensus 230 ---dg~i~i~d~~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 284 (346)
-..+.+||+.+. ....+.... ..-..+.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 165 ~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 165 GRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFV--KD-KIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp CEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTEEBCCEEEEETTT
T ss_pred ccccceEEEeCCCCC--eEEECCCccchhhcceEEEE--CC-EEEEEeCCCCCCCCceEEEeeCCC
Confidence 345888998752 222222111 11122222 45 677777653 3588888876
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.65 E-value=0.38 Score=47.42 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=127.8
Q ss_pred ceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCce
Q 019059 79 RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQ 158 (346)
Q Consensus 79 ~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 158 (346)
..+++....+....|.|-|+..+ ..+.+.-..-+ +.-.+|..+ +++--....+.|+|+++..+...
T Consensus 36 kyicvre~~~~~~~vvIidl~~~--------~~~~rrpi~Ad----sAIMnP~~~--iiALrag~~lQiFnl~~k~klks 101 (1630)
T 1xi4_A 36 KFICIREKVGEQAQVVIIDMNDP--------SNPIRRPISAD----SAIMNPASK--VIALKAGKTLQIFNIEMKSKMKA 101 (1630)
T ss_pred ceEEEEecCCCCceEEEEECCCC--------CCcccccccch----hhccCCCcc--eEEEecCCeEEEeehHHhhhhcc
Confidence 44444433345557888888731 11211111112 223567766 45543478999999997665444
Q ss_pred eeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC-ccceeecc-----c-eeEEEeCCCCCcEEEEec---
Q 019059 159 VQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG-KTNSIEHA-----H-VRNVDYDTKKKHLLVTAA--- 228 (346)
Q Consensus 159 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~-----~-v~~~~~~~~~~~~l~~~~--- 228 (346)
..... +|.-=.|-.+ +.|+..+ +..|+-|++.... +.+.+... . |..-..+++.++++++|-
T Consensus 102 ~~~~e------~VvfWkWis~-~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 102 HTMTD------DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred cccCC------CceEEEecCC-CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 43322 5655567543 3344443 5679999997533 33333311 1 777778888886666554
Q ss_pred ---CCCeEEEEEcccCCcceeeecCCCcceEEEEeC--CCCCcEEEEecC---CCeEEEEecCCCCCCCCCcccccCCcc
Q 019059 229 ---DESGIHLWDLRMLKAPIQELPGHTHWTWAVCCN--PEYDGFILSAGT---DSTVNLWLVSTSNHDELPSESLVESPN 300 (346)
Q Consensus 229 ---~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~--~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~ 300 (346)
-.|.+.+|..+. ..-+.+.+|......+... +....+++.+.. .+.++|-++........ ..+
T Consensus 174 ~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~------~f~- 244 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ------PFP- 244 (1630)
T ss_pred CCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC------CCc-
Confidence 347889999874 3455677777665544442 121134443332 26889988865200000 000
Q ss_pred ccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeeecC
Q 019059 301 QRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHMLEK 346 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~~~ 346 (346)
+........-..-..-..++..++.-. ++...+.-|.+.+||++.
T Consensus 245 kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 245 KKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLET 289 (1630)
T ss_pred cccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEeccc
Confidence 000000000001122245677777665 777788889999999863
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.60 E-value=0.22 Score=40.54 Aligned_cols=203 Identities=7% Similarity=0.031 Sum_probs=105.5
Q ss_pred CCeEEEEEecCCCCeEEEeeeeccccceEEeeecCCCCceEEEEeecC----------CcceEEEEecCcccCCCCCccc
Q 019059 41 ENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG----------ESYGAAIWQIPELYGQLNSPQL 110 (346)
Q Consensus 41 ~~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~~~~----------~d~~i~vw~~~~~~~~~~~~~~ 110 (346)
.+.++.++.+..+...... +. +--+++++..|..+....+ ....|+..+++ .
T Consensus 36 ~~~ly~~~~dg~~~~~l~~------~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d---------g- 97 (302)
T 3s25_A 36 NGRLYAMNIDGSNIHKLSN------DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN---------G- 97 (302)
T ss_dssp TTEEEEEETTSCSCEEEEE------EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT---------S-
T ss_pred CceEEEEcCCCCCCEEccC------Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC---------C-
Confidence 4666666655543332221 11 2345788888888753221 13456666665 1
Q ss_pred eeeeeeeccCCceEEEEeecCCCCcEEEE---ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEe
Q 019059 111 ERIAALDAHVGKINCVLWWSSGRHDKLVS---IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAAT 187 (346)
Q Consensus 111 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 187 (346)
.....+.. .. +..|++++++++.+. .....|...+++... ...+ ... .+ .+++|+++.|+-.+
T Consensus 98 ~~~~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~l-t~~------~~--~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 98 HGSTVLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKI-KNH------YL--FTCNTSDRYFYYNN 163 (302)
T ss_dssp CCCEEEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEE-ESS------CC--CCSEEETTEEEEEC
T ss_pred CcceEeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEE-eCC------Cc--eEeeEECCEEEEEe
Confidence 11222221 11 236788888766665 234455555665322 2222 221 11 34667888888776
Q ss_pred c-CCeEEEEEccCCCccceeeccceeEEEeCCCCCcEEEEecCC-CeEEEEEcccCCcceeeecCCCcceEEEEeCCCCC
Q 019059 188 C-ESSVQFWDLRSMGKTNSIEHAHVRNVDYDTKKKHLLVTAADE-SGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYD 265 (346)
Q Consensus 188 ~-d~~i~i~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~ 265 (346)
. ...|.+.++..+.....+. +... ..+.|++.+++.+-..+ ..|..-++.. .....+.. ..+ ..|+|++
T Consensus 164 ~g~~~Iy~~~l~g~~~~~l~~-~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG--~~~~~Lt~--~~~--~~~~~~g- 234 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEALFYD-CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN--PNPVVLTE--ANI--EHYNVYG- 234 (302)
T ss_dssp TTTCCEEEEETTTTEEEEEEC-SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS--CCCEECSC--SCE--EEEEEET-
T ss_pred CCCceEEEEECCCCCEEEEeC-CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC--CCeEEEeC--CCc--ceEEECC-
Confidence 5 5788888887655433322 3222 23558888555554333 3566666653 23344432 233 3477888
Q ss_pred cEEEEec--CCCeEEEEecCC
Q 019059 266 GFILSAG--TDSTVNLWLVST 284 (346)
Q Consensus 266 ~~l~s~~--~d~~i~iwd~~~ 284 (346)
..|+-++ ..+.|..-++.-
T Consensus 235 ~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 235 SLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp TEEEEEECSSSCEEEEEETTS
T ss_pred CEEEEEECCCCcEEEEEECCC
Confidence 6665442 234565555553
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.51 E-value=0.25 Score=41.24 Aligned_cols=102 Identities=9% Similarity=0.134 Sum_probs=57.9
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCC--cccee----eccc--eeEEEeCCC---CCcEEEEecC-------CC
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMG--KTNSI----EHAH--VRNVDYDTK---KKHLLVTAAD-------ES 231 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~----~~~~--v~~~~~~~~---~~~~l~~~~~-------dg 231 (346)
....++|.|+++.++++...+.|++++..... .+..+ ..+. ...|+++|+ +..++++-.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 56789999999856666778999999854221 11111 1112 789999996 4435554332 23
Q ss_pred eEEEEEcccCC----cc---eeeec---CCCcceEEEEeCCCCCcEEEEec
Q 019059 232 GIHLWDLRMLK----AP---IQELP---GHTHWTWAVCCNPEYDGFILSAG 272 (346)
Q Consensus 232 ~i~i~d~~~~~----~~---~~~~~---~~~~~v~~v~~~~~~~~~l~s~~ 272 (346)
.|..|++.... .. +..+. ........+.|.|+| .+.++.+
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G 148 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALG 148 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEEC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEEC
Confidence 56666654211 01 11111 111224679999999 6665543
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.03 E-value=0.48 Score=38.54 Aligned_cols=138 Identities=9% Similarity=-0.052 Sum_probs=68.2
Q ss_pred CcEEEEec----C-----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccC
Q 019059 134 HDKLVSID----E-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRS 199 (346)
Q Consensus 134 ~~~~~~~~----d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 199 (346)
.+++.++. + ..+.+||+.+.+ ...... ..........+.+ ++..++.|+.+ ..+.+||+.+
T Consensus 72 ~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 72 LLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--WSPCAP-MSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp EEEEECCEEEETTEEEECCCEEEEETTTTE--EEECCC-CSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred EEEEECCCcCCCCCCeecceEEEECCCCCe--EeECCC-CCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 35666654 2 468888887543 111111 1111112222223 45556665532 4688899887
Q ss_pred CCccc--eeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEcccCCcceeeecC---CCcceEEEEeCCCCCcE
Q 019059 200 MGKTN--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGF 267 (346)
Q Consensus 200 ~~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~ 267 (346)
.+-.. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+.. ...+.. .......+.+ ++ .+
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~-~i 218 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYPERNE--WRMITAMNTIRSGAGVCVL--HN-CI 218 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEEE--TT-EE
T ss_pred CeEeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeCCCCe--EeeCCCCCCccccceEEEE--CC-EE
Confidence 64221 122111 222333 444 77777654 458889987521 222211 1111222223 45 67
Q ss_pred EEEecCC-----CeEEEEecCC
Q 019059 268 ILSAGTD-----STVNLWLVST 284 (346)
Q Consensus 268 l~s~~~d-----~~i~iwd~~~ 284 (346)
++.|+.+ ..+.+||+.+
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTT
T ss_pred EEEeCCCCCCccceEEEEeCCC
Confidence 7777664 4688899876
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.93 E-value=1.4 Score=43.14 Aligned_cols=211 Identities=12% Similarity=0.100 Sum_probs=99.8
Q ss_pred CeEEEEEecCCCCeEEEeeeeccccceEEeeecCCC------CceEEEEeecCCcceEEEEecCcccCCCCCccceeeee
Q 019059 42 NEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFD------QRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA 115 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~------~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~ 115 (346)
+.+..+++.+. .+.......-+.+|.|+++.|.. +.+++++ -.|++++|++++ ..+.+..
T Consensus 532 ~~l~~fel~~~--~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~---~~d~tv~I~sL~---------~l~~~~~ 597 (1158)
T 3ei3_A 532 RALYYLQIHPQ--ELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGL---WTDISARILKLP---------SFELLHK 597 (1158)
T ss_dssp TEEEEEEEETT--EEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEE---TTTTEEEEEETT---------TCCEEEE
T ss_pred CEEEEEEeeCC--ceeeecccCCCCceEEEEeecCCCCcccccEEEEEE---CCCCEEEEEECC---------CCCeEEE
Confidence 56666666652 22222223345789999998642 3455542 348999999998 3333332
Q ss_pred eec-cCCceEEEEeec-CCCCcEEEEecCCeEEEEEcCCCC-CCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeE
Q 019059 116 LDA-HVGKINCVLWWS-SGRHDKLVSIDEENIFLWSLDCSN-KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSV 192 (346)
Q Consensus 116 ~~~-~~~~i~~~~~~~-~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 192 (346)
..- ......++.+.. .+...++++-.||.+..+.++... ......... -+ ..++.-..+...+..-+.+..+...
T Consensus 598 ~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~-LG-~~pv~L~~~~~~~~~~V~a~s~rp~ 675 (1158)
T 3ei3_A 598 EMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT-LG-TQPTVLRTFRSLSTTNVFACSDRPT 675 (1158)
T ss_dssp EECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE-CC-SSCCEEEEEESSSCEEEEEESSSCE
T ss_pred EECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE-cC-CCceEEEEEeeCCceeEEEECCCCE
Confidence 211 112334444332 222235666678988777765321 111111111 11 1233333333333333333334444
Q ss_pred EEEEccCCCcc-ceeeccce-eEEEeCCCC-CcEEEEecCCCeEEEEEcccCCc-ceeeecCCCcceEEEEeCCCCCcEE
Q 019059 193 QFWDLRSMGKT-NSIEHAHV-RNVDYDTKK-KHLLVTAADESGIHLWDLRMLKA-PIQELPGHTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 193 ~i~d~~~~~~~-~~~~~~~v-~~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~l 268 (346)
.++--+ ++.. ..+....+ ....|+... +.-++..+ ++.++|..+..... .++++. -...+..++++|.. ..+
T Consensus 676 liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~-~~~ 751 (1158)
T 3ei3_A 676 VIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVS-QCF 751 (1158)
T ss_dssp EEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGG-TEE
T ss_pred EEEEcC-CceEEeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCC-CEE
Confidence 444433 2211 11111111 233343221 11344333 45699988764322 233333 34577889999987 555
Q ss_pred EEec
Q 019059 269 LSAG 272 (346)
Q Consensus 269 ~s~~ 272 (346)
+.+.
T Consensus 752 ~v~~ 755 (1158)
T 3ei3_A 752 GVLS 755 (1158)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 329
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.48 E-value=0.79 Score=37.02 Aligned_cols=138 Identities=8% Similarity=0.029 Sum_probs=68.1
Q ss_pred CcEEEEecC-----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec-------CCeEEEEEccCCC
Q 019059 134 HDKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-------ESSVQFWDLRSMG 201 (346)
Q Consensus 134 ~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~ 201 (346)
.+++.++.+ ..+.+||+.+.+ ...... ..........+.+ ++..++.++. -..+.+||+.+.+
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKSNE--WFHVAP-MNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTTTE--EEEECC-CSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred EEEEEcCCCCCccCceEEEEeCCCCe--EeecCC-CCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 366777644 357788877543 222111 1111112222222 4555555553 2458899988764
Q ss_pred ccc--eeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEcccCCcceeeecCCC---cceEEEEeCCCCCcEEE
Q 019059 202 KTN--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPGHT---HWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 202 ~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~---~~v~~v~~~~~~~~~l~ 269 (346)
-.. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+ . ....+.... .....+.+ ++ .+++
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~-~-~W~~~~~~~~~r~~~~~~~~--~~-~i~v 256 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNL-LYAVGGHDGPLVRKSVEVYDPTT-N-AWRQVADMNMCRRNAGVCAV--NG-LLYV 256 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTE-EEEECCBSSSSBCCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TT-EEEE
T ss_pred EEECCCCccccccccEEEE--CCE-EEEECCCCCCcccceEEEEeCCC-C-CEeeCCCCCCccccCeEEEE--CC-EEEE
Confidence 221 122111 222333 344 77777654 3688999875 2 122222111 11112222 45 6777
Q ss_pred EecCCC-----eEEEEecCC
Q 019059 270 SAGTDS-----TVNLWLVST 284 (346)
Q Consensus 270 s~~~d~-----~i~iwd~~~ 284 (346)
.|+.++ .+.+||..+
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTT
T ss_pred ECCcCCCcccccEEEEcCCC
Confidence 777653 488888876
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.36 E-value=0.87 Score=36.74 Aligned_cols=140 Identities=11% Similarity=0.009 Sum_probs=70.3
Q ss_pred CCCCcEEEEecC-----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCC
Q 019059 131 SGRHDKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSM 200 (346)
Q Consensus 131 ~~~~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~ 200 (346)
++. +++.++.+ ..+.+||+.+.+ ...+.... ........+.+ ++..++.|+.+ ..+.+||+.+.
T Consensus 112 ~~~-lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 112 GDM-IYVSGGFDGSRRHTSMERYDPNIDQ-WSMLGDMQ--TAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp TTE-EEEECCBCSSCBCCEEEEEETTTTE-EEEEEECS--SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCE-EEEEcccCCCcccceEEEEcCCCCe-EEECCCCC--CCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 444 56666533 468888887543 12221111 11112222222 45666666543 46889998876
Q ss_pred Cccc--eeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEcccCCcceeeecC---CCcceEEEEeCCCCCcEE
Q 019059 201 GKTN--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 201 ~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~l 268 (346)
+-.. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+.. ...+.. .......+.+ ++ .++
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~--~~-~i~ 257 (301)
T 2vpj_A 186 HWTNVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDS--WTTVTSMTTPRCYVGATVL--RG-RLY 257 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE--TT-EEE
T ss_pred cEEeCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCCCc--EEECCCCCCcccceeEEEE--CC-EEE
Confidence 5322 111111 223333 344 77777654 468899987521 222221 1111122222 45 677
Q ss_pred EEecCC-----CeEEEEecCC
Q 019059 269 LSAGTD-----STVNLWLVST 284 (346)
Q Consensus 269 ~s~~~d-----~~i~iwd~~~ 284 (346)
+.|+.+ ..+.+||..+
T Consensus 258 v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 258 AIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp EECCBCSSSBEEEEEEEETTT
T ss_pred EEcCcCCCcccccEEEEcCCC
Confidence 777765 3577888876
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.27 E-value=0.37 Score=42.40 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=63.2
Q ss_pred EEEEEccC----CC-ccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc-----------c-eeeecCCCc
Q 019059 192 VQFWDLRS----MG-KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA-----------P-IQELPGHTH 253 (346)
Q Consensus 192 i~i~d~~~----~~-~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-----------~-~~~~~~~~~ 253 (346)
+.+.|.+. +. ....+..+. ...+..+|+|+++++.|-.+.++.++|+++... . +.... -.-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCS
T ss_pred eeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCC
Confidence 55666654 22 222233333 888999999998888888899999999984211 1 11122 234
Q ss_pred ceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.....+|.++| ....|.-.|.+|.-|++..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 56778999999 7777788899999999975
No 332
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.26 E-value=1.3 Score=38.37 Aligned_cols=113 Identities=7% Similarity=-0.062 Sum_probs=59.4
Q ss_pred cceEEeeecCCCC-ceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee----e-----ccCCceEEEEeecC---C
Q 019059 66 NEIWDLSSCPFDQ-RIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL----D-----AHVGKINCVLWWSS---G 132 (346)
Q Consensus 66 ~~v~~~~~~~~~~-~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~----~-----~~~~~i~~~~~~~~---~ 132 (346)
...+.|+|.|++. +++++ ...|.|++++.+... ...++..+ . ........|+|+|+ +
T Consensus 14 ~~P~~~a~~pdG~~rl~V~----er~G~i~~~~~~g~~------~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFIL----EKEGYVKILTPEGEI------FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp SSEEEEECCSSSSCCEEEE----ETTTEEEEECTTSCB------CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred CCceEEEECCCCCeEEEEE----eCCceEEEEeCCCCe------eeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 3567899999986 45554 367888888643100 00111111 1 11456789999986 3
Q ss_pred CCcEEEEec--C----------CeEEEEEcCCCC-------CCceeeecccCCCceeeEEEEeCCCCCcEEEEec
Q 019059 133 RHDKLVSID--E----------ENIFLWSLDCSN-------KNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188 (346)
Q Consensus 133 ~~~~~~~~~--d----------~~i~vwd~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 188 (346)
.+++++-+. + ..|.-|.+.... ....+..............++|.||+.+.++.+.
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 333443332 1 145556665321 0111111111112235688999999977666654
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.01 E-value=0.17 Score=41.87 Aligned_cols=108 Identities=5% Similarity=-0.020 Sum_probs=64.4
Q ss_pred EEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEe--CCCCCcEEEE--ecCCeEEEEEccCCCccceeeccc-
Q 019059 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAW--DPHDVNAVAA--TCESSVQFWDLRSMGKTNSIEHAH- 210 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~- 210 (346)
+++++.||.|.-+|..+++...++.... ..++....- .+.+..++.+ ..||.|..+|..+|.....+..+.
T Consensus 13 V~v~t~dG~l~Ald~~tG~~~W~~~~~~----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 13 LIAADVEGGLHAVDRRNGHIIWSIEPEN----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECGGG----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCc----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 6777789999999988877666554431 001111110 0112234444 479999999998875544333222
Q ss_pred ee--EEEeC-----------CCCCcEEEEecCCCeEEEEEcccCCcceeeec
Q 019059 211 VR--NVDYD-----------TKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (346)
Q Consensus 211 v~--~~~~~-----------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (346)
+. -+... ..+. .+++|+.+|.+...|+++ ++.+..+.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~t-G~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLN-GEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTT-CCEEEEES
T ss_pred eeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCC-CcEEEEEe
Confidence 21 12110 0233 788999999999999998 55666665
No 334
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.93 E-value=2.3 Score=35.23 Aligned_cols=150 Identities=16% Similarity=0.075 Sum_probs=82.4
Q ss_pred eeeccCCceEEEEeecCCCCcEEEEec-CCeEEEEEcCCCCCCceeeec--ccCCCceeeEEEEeCCC---CCcEEEE-e
Q 019059 115 ALDAHVGKINCVLWWSSGRHDKLVSID-EENIFLWSLDCSNKNAQVQSK--QSSGMLHYLSGGAWDPH---DVNAVAA-T 187 (346)
Q Consensus 115 ~~~~~~~~i~~~~~~~~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~---~~~l~~~-~ 187 (346)
.+...-.....|+|.|+|. ++++.. .|.|++++...+.. ..+... ...........++++|+ +..|++. +
T Consensus 26 ~va~gL~~P~~ia~~pdG~--llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGD--LLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEECCCSSEEEEEECTTSC--EEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred EeecCCCCceEEEEcCCCc--EEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 3333345678999999998 555555 89999988654432 111111 11112346789999996 4445543 2
Q ss_pred --cCCeEEEEEccCCC----c---cc----eee--ccc-eeEEEeCCCCCcEEEEecC-------------CCeEEEEEc
Q 019059 188 --CESSVQFWDLRSMG----K---TN----SIE--HAH-VRNVDYDTKKKHLLVTAAD-------------ESGIHLWDL 238 (346)
Q Consensus 188 --~d~~i~i~d~~~~~----~---~~----~~~--~~~-v~~~~~~~~~~~~l~~~~~-------------dg~i~i~d~ 238 (346)
.++.|.-|.+..+. . .. .+. ..| ...|+|.|+|. ++++.+. .|.|.-.+.
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 34566667665421 1 11 111 124 77899999997 6666432 245544554
Q ss_pred ccC---Ccc---eeee-cCCCcceEEEEeCCCCCcEEEE
Q 019059 239 RML---KAP---IQEL-PGHTHWTWAVCCNPEYDGFILS 270 (346)
Q Consensus 239 ~~~---~~~---~~~~-~~~~~~v~~v~~~~~~~~~l~s 270 (346)
... ..+ ...+ .+|. ....++|+|+| .++++
T Consensus 182 dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G-~L~~~ 218 (347)
T 3das_A 182 DGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQ-RLFAS 218 (347)
T ss_dssp TSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTC-CEEEE
T ss_pred CCCccCCCCCCCCeEEeeCCC-CcceEEECCCC-CEEEE
Confidence 321 000 1112 2343 34678999988 55544
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.81 E-value=0.86 Score=40.23 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=53.3
Q ss_pred eeEEEEeCCCCCcEEEEec-CCeEEEEEccCC------Cc-------cceeeccc-eeEEEeCCCCCcEEEEecCCCeEE
Q 019059 170 YLSGGAWDPHDVNAVAATC-ESSVQFWDLRSM------GK-------TNSIEHAH-VRNVDYDTKKKHLLVTAADESGIH 234 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~------~~-------~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~ 234 (346)
...++..+|||+++++++. +.++.++|++.. +. ......+- ....+|+++|. .+.+---|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGN-AYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSE-EEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCc-eEeeeeecceEE
Confidence 4567889999999999885 789999999842 11 11222222 89999999994 777777899999
Q ss_pred EEEccc
Q 019059 235 LWDLRM 240 (346)
Q Consensus 235 i~d~~~ 240 (346)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999875
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.73 E-value=2.3 Score=34.51 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=50.5
Q ss_pred CCCcEEEEecC--------CeEEEEEccCCCc--cceeeccc--eeEEEeCCCCCcEEEEecC-C-----CeEEEEEccc
Q 019059 179 HDVNAVAATCE--------SSVQFWDLRSMGK--TNSIEHAH--VRNVDYDTKKKHLLVTAAD-E-----SGIHLWDLRM 240 (346)
Q Consensus 179 ~~~~l~~~~~d--------~~i~i~d~~~~~~--~~~~~~~~--v~~~~~~~~~~~~l~~~~~-d-----g~i~i~d~~~ 240 (346)
++..++.|+.+ ..+.+||+.+.+- +..+..+. ...+. -++. +++.|+. + ..+.+||+.+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDL-VYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTE-EEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCE-EEEEeCCCCCCcccceEEEEeCCC
Confidence 45555565521 4688999987642 11222111 22222 2444 7777765 2 3688899875
Q ss_pred CCcceeeecC---CCcceEEEEeCCCCCcEEEEecCCC-----eEEEEecCC
Q 019059 241 LKAPIQELPG---HTHWTWAVCCNPEYDGFILSAGTDS-----TVNLWLVST 284 (346)
Q Consensus 241 ~~~~~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d~-----~i~iwd~~~ 284 (346)
.. -..+.. .......+.+ ++ .+++.|+.++ .+.+||..+
T Consensus 175 ~~--W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 175 FE--WKELAPMQTARSLFGATVH--DG-RIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TE--EEECCCCSSCCBSCEEEEE--TT-EEEEEEEECSSSEEEEEEEEETTT
T ss_pred Ce--EEECCCCCCchhceEEEEE--CC-EEEEEeccCCCCccceEEEEECCC
Confidence 21 222211 1111122222 45 6777777654 578888876
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.73 E-value=4.4 Score=37.69 Aligned_cols=194 Identities=12% Similarity=0.023 Sum_probs=102.3
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec----cCCceEEEEeecCCCCcEEEEecC
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----HVGKINCVLWWSSGRHDKLVSIDE 142 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~d 142 (346)
.|.++.-.+++..-+.+ ++.+..++... ........... ....|.++.-.+++. +-+++..
T Consensus 374 ~v~~i~~d~~g~lWigt------~~GL~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigT~~ 438 (758)
T 3ott_A 374 RIRHIYEDKEQQLWIAT------DGSINRYDYAT-------RQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ--LWISTCL 438 (758)
T ss_dssp CEEEEEECTTSCEEEEE------TTEEEEEETTT-------TEEEEEEEECCC--CBSSSEEEEEECTTSE--EEEEESS
T ss_pred ceEEEEECCCCCEEEEe------CCcHhhcCcCC-------CcEEEeecCCCcCCCCCceEEEEEEcCCCC--EEEEECC
Confidence 47777766666544432 23577787651 11111111010 234578887777766 5556555
Q ss_pred CeEEEEEcCCC--CCCceee-----ecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee----ccc-
Q 019059 143 ENIFLWSLDCS--NKNAQVQ-----SKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE----HAH- 210 (346)
Q Consensus 143 ~~i~vwd~~~~--~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~- 210 (346)
+-+.++|..+. .....+. .....-....|.++...+++...+.++..+-|..+|..+++...... ...
T Consensus 439 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~ 518 (758)
T 3ott_A 439 GGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKS 518 (758)
T ss_dssp SCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGC
T ss_pred CceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcc
Confidence 67888886521 0000110 01111112358888888888766544444568889987664332111 112
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec--C-CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP--G-HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~-~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+.++....+|. +.+ |+.. -+..+|..+.. ...+. + ....|.++... +| . |..++.+| |..+|..+
T Consensus 519 ~~~i~~d~~g~-lWi-gt~~-Gl~~~~~~~~~--~~~~~~~gl~~~~i~~i~~~-~g-~-lWi~t~~G-l~~~~~~~ 586 (758)
T 3ott_A 519 PNYLLCDEDGL-LWV-GFHG-GVMRINPKDES--QQSISFGSFSNNEILSMTCV-KN-S-IWVSTTNG-LWIIDRKT 586 (758)
T ss_dssp EEEEEECTTSC-EEE-EETT-EEEEECC--CC--CCBCCCCC---CCEEEEEEE-TT-E-EEEEESSC-EEEEETTT
T ss_pred cceEEECCCCC-EEE-EecC-ceEEEecCCCc--eEEecccCCCccceEEEEEC-CC-C-EEEECCCC-eEEEcCCC
Confidence 88888888887 444 4444 47788876422 22221 1 12457777653 55 4 44455556 77788776
No 338
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=93.42 E-value=4.8 Score=37.15 Aligned_cols=202 Identities=9% Similarity=0.074 Sum_probs=104.4
Q ss_pred eEEee-ecCCCCceEEEEeecCCc-ceEEEEecCcccCCCCCccceeee-eee-ccCC------ceEEEEeecCCCCcEE
Q 019059 68 IWDLS-SCPFDQRIFSTVFSTGES-YGAAIWQIPELYGQLNSPQLERIA-ALD-AHVG------KINCVLWWSSGRHDKL 137 (346)
Q Consensus 68 v~~~~-~~~~~~~l~~~~~~~~~d-~~i~vw~~~~~~~~~~~~~~~~~~-~~~-~~~~------~i~~~~~~~~~~~~~~ 137 (346)
...+. ++|++++++.+...||+| ..++++|+. +.+.+. .+. .-+. ....++|..++. +++
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~---------t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~-~~~ 200 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLE---------KKDFVKNGFEPITNSGKLLEGKFTYPTWINKDT-IIF 200 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETT---------TTEECTTCSCCBCTTCCBCCEETCCEEEEETTE-EEE
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECC---------cCCcCCCCcccccccccccccccceeeEECCCE-EEE
Confidence 34455 899999988887777776 568999998 333332 111 0000 113347764333 333
Q ss_pred EE----------ecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCc-----EEEEec---CCeEEEEEccC
Q 019059 138 VS----------IDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVN-----AVAATC---ESSVQFWDLRS 199 (346)
Q Consensus 138 ~~----------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~---d~~i~i~d~~~ 199 (346)
+. +....|+.|.+.+......+....... . ...+...+++++. +++.+. ...+++.|...
T Consensus 201 ~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 278 (711)
T 4hvt_A 201 NLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKE-Y-IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY 278 (711)
T ss_dssp CCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTT-S-CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS
T ss_pred EeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCC-c-eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC
Confidence 32 123678899887764433333322111 1 1234455666664 333332 24566667653
Q ss_pred CC-ccceeeccceeEEEeCCCCCcEEEEec----------CCCeEEEEEcccCC------cceee-ecC-CCcceEEEEe
Q 019059 200 MG-KTNSIEHAHVRNVDYDTKKKHLLVTAA----------DESGIHLWDLRMLK------APIQE-LPG-HTHWTWAVCC 260 (346)
Q Consensus 200 ~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~i~d~~~~~------~~~~~-~~~-~~~~v~~v~~ 260 (346)
.. ....+..+.-..+..+.++. +++... ..+.|...|+.... ...+. +.. ....+..+.|
T Consensus 279 ~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 357 (711)
T 4hvt_A 279 KNLKLQKINMPSDATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFIST 357 (711)
T ss_dssp SSCEEEECCSCTTCEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEE
T ss_pred CCCcceEeecCCcceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEE
Confidence 22 11222212211222334554 444321 35678889987631 12233 322 2346778888
Q ss_pred CCCCCcEEEEecCCCe--EEEEecCC
Q 019059 261 NPEYDGFILSAGTDST--VNLWLVST 284 (346)
Q Consensus 261 ~~~~~~~l~s~~~d~~--i~iwd~~~ 284 (346)
..+ .++++...++. |.++|+..
T Consensus 358 ~~~--~l~~~~~~~~~~~l~~~~~~~ 381 (711)
T 4hvt_A 358 TKD--RVFLATYDNVVAKVVTFTLEN 381 (711)
T ss_dssp CSS--CEEEEEEETTEEEEEEECEET
T ss_pred ECC--EEEEEEEECCEEEEEEEECCC
Confidence 875 57777777774 66666654
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.55 E-value=6.3 Score=36.26 Aligned_cols=147 Identities=6% Similarity=0.070 Sum_probs=73.9
Q ss_pred CCCCcEEEEecC------CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCC--eEEEEEccCCCc
Q 019059 131 SGRHDKLVSIDE------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCES--SVQFWDLRSMGK 202 (346)
Q Consensus 131 ~~~~~~~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~ 202 (346)
++. +++.||.+ ..+.+||..+.. ...... ..... .-.+++...++..++.|+.++ .+.+||+.+.+-
T Consensus 451 ~~~-lyv~GG~~~~~~~~~dv~~yd~~t~~--W~~~~~-~p~~R-~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W 525 (695)
T 2zwa_A 451 NNQ-LLLIGGRKAPHQGLSDNWIFDMKTRE--WSMIKS-LSHTR-FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF 525 (695)
T ss_dssp TTE-EEEECCBSSTTCBCCCCEEEETTTTE--EEECCC-CSBCC-BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE
T ss_pred CCE-EEEEcCCCCCCCccccEEEEeCCCCc--EEECCC-CCCCc-ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce
Confidence 454 66776542 357888887542 111111 11111 112223323667777776543 799999987652
Q ss_pred cce-----eeccc--eeEEEeCCCCCcEEEEecC--C-----CeEEEEEcccCCc--c--eeeecC----CCcceEEEEe
Q 019059 203 TNS-----IEHAH--VRNVDYDTKKKHLLVTAAD--E-----SGIHLWDLRMLKA--P--IQELPG----HTHWTWAVCC 260 (346)
Q Consensus 203 ~~~-----~~~~~--v~~~~~~~~~~~~l~~~~~--d-----g~i~i~d~~~~~~--~--~~~~~~----~~~~v~~v~~ 260 (346)
... ...+. ..++.+..+...+++.|+. + ..+.+||+.+..- . ...+.. .......+ .
T Consensus 526 ~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~ 604 (695)
T 2zwa_A 526 KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-Y 604 (695)
T ss_dssp EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-E
T ss_pred EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-E
Confidence 221 11111 3445555552337777765 2 4588999886330 0 111111 11111222 2
Q ss_pred CCCCCcEEEEecCC--------CeEEEEecCC
Q 019059 261 NPEYDGFILSAGTD--------STVNLWLVST 284 (346)
Q Consensus 261 ~~~~~~~l~s~~~d--------~~i~iwd~~~ 284 (346)
..++ .+++.|+.+ ..+.+||..+
T Consensus 605 ~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 605 ITPR-KLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp EETT-EEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred eCCC-EEEEECCccCCCCCCCCCeEEEEECCC
Confidence 2325 677777743 4588999886
No 340
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.32 E-value=3.8 Score=33.12 Aligned_cols=140 Identities=6% Similarity=-0.021 Sum_probs=69.0
Q ss_pred CCCCcEEEEecC-----CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecC-----CeEEEEEccCC
Q 019059 131 SGRHDKLVSIDE-----ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCE-----SSVQFWDLRSM 200 (346)
Q Consensus 131 ~~~~~~~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~ 200 (346)
+++ +++.++.+ ..+.+||+.+.+ ...... ..........+.+ ++..++.++.+ ..+.+||+.+.
T Consensus 121 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 121 DGH-IYAVGGSHGCIHHNSVERYEPERDE--WHLVAP-MLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp TTE-EEEECCEETTEECCCEEEEETTTTE--EEECCC-CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCE-EEEEcCCCCCcccccEEEECCCCCe--EeECCC-CCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 444 56666432 468888887543 111111 1111112222233 45556666543 46889998876
Q ss_pred Ccc--ceeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEcccCCcceeeecC---CCcceEEEEeCCCCCcEE
Q 019059 201 GKT--NSIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFI 268 (346)
Q Consensus 201 ~~~--~~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~l 268 (346)
+-. ..+.... ...+.+ ++. +++.|+.+ ..+.+||+.+. ....+.. .......+.+ ++ .++
T Consensus 195 ~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~i~ 266 (308)
T 1zgk_A 195 EWRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETE--TWTFVAPMKHRRSALGITVH--QG-RIY 266 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TT-EEE
T ss_pred eEeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCC--cEEECCCCCCCccceEEEEE--CC-EEE
Confidence 422 1111111 223333 444 77777654 46889998752 1222211 1111122222 45 677
Q ss_pred EEecCC-----CeEEEEecCC
Q 019059 269 LSAGTD-----STVNLWLVST 284 (346)
Q Consensus 269 ~s~~~d-----~~i~iwd~~~ 284 (346)
+.|+.+ ..+.+||+.+
T Consensus 267 v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 267 VLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EECCBCSSCBCCEEEEEETTT
T ss_pred EEcCcCCCcccceEEEEcCCC
Confidence 777754 3577888876
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.21 E-value=4 Score=33.13 Aligned_cols=98 Identities=10% Similarity=0.107 Sum_probs=49.6
Q ss_pred CCCcEEEEecC-------CeEEEEEccCCCccc--eeeccc--eeEEEeCCCCCcEEEEecC------CCeEEEEEcccC
Q 019059 179 HDVNAVAATCE-------SSVQFWDLRSMGKTN--SIEHAH--VRNVDYDTKKKHLLVTAAD------ESGIHLWDLRML 241 (346)
Q Consensus 179 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~ 241 (346)
++..++.|+.+ ..+.+||+.+.+-.. .+.... ...+. .++. +++.|+. -..+.+||+.+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGM-IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTE-EEEECCEESSSCBCCCEEEEETTTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCE-EEEEcCCCCCCCccceEEEEcCCCC
Confidence 45666666643 357888988765221 111111 22222 2454 7777763 235889998752
Q ss_pred CcceeeecC---CCcceEEEEeCCCCCcEEEEecCC-----CeEEEEecCC
Q 019059 242 KAPIQELPG---HTHWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (346)
Q Consensus 242 ~~~~~~~~~---~~~~v~~v~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 284 (346)
. -..+.. .......+.+ ++ .+++.|+.+ ..+.+||+.+
T Consensus 186 ~--W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 186 D--WKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp E--EEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTT
T ss_pred E--EEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCC
Confidence 1 222211 1111122222 45 667777643 3577888876
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.00 E-value=4.2 Score=33.58 Aligned_cols=94 Identities=9% Similarity=-0.061 Sum_probs=44.8
Q ss_pred CCCCcEEEEec-CCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec-C---------CeEEEEEccC
Q 019059 131 SGRHDKLVSID-EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC-E---------SSVQFWDLRS 199 (346)
Q Consensus 131 ~~~~~~~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~i~d~~~ 199 (346)
++. +++.++. ...+.++|+.+.....................+.+ ++..++.|+. + ..+.+||+.+
T Consensus 19 ~~~-iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDT-VYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTE-EEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCE-EEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 444 5666643 46788999874222222222111011112222223 4555666654 2 4688999887
Q ss_pred CCcc--ceee-ccc--eeEEEeCCCCCcEEEEecCC
Q 019059 200 MGKT--NSIE-HAH--VRNVDYDTKKKHLLVTAADE 230 (346)
Q Consensus 200 ~~~~--~~~~-~~~--v~~~~~~~~~~~~l~~~~~d 230 (346)
.+-. ..+. ... ..++. .++. +++.|+.+
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~ 128 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFV--HNGK-AYVTGGVN 128 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEE--ETTE-EEEEECCC
T ss_pred CcEEECCCCCCcccccceEEE--ECCE-EEEEeCcC
Confidence 6422 1222 122 22333 3454 77777754
No 343
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.78 E-value=4.3 Score=32.65 Aligned_cols=171 Identities=8% Similarity=-0.029 Sum_probs=82.5
Q ss_pred ceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecC------CeEEEEEcCCCCCCceeeeccc
Q 019059 91 YGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDE------ENIFLWSLDCSNKNAQVQSKQS 164 (346)
Q Consensus 91 ~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d------~~i~vwd~~~~~~~~~~~~~~~ 164 (346)
..+.+||... .....+..+.........+.+ +++ +++.++.+ ..+.+||..+.. ...... .
T Consensus 70 ~~~~~~d~~~-------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~~-~ 136 (306)
T 3ii7_A 70 KRMDCYNVVK-------DSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTES--WHTKPS-M 136 (306)
T ss_dssp CEEEEEETTT-------TEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTE--EEEECC-C
T ss_pred ceEEEEeCCC-------CeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCc--eEeCCC-C
Confidence 4577778762 233443333222222222222 444 56666544 568889987643 121111 1
Q ss_pred CCCceeeEEEEeCCCCCcEEEEec---------CCeEEEEEccCCCccc--eeeccc--eeEEEeCCCCCcEEEEecCC-
Q 019059 165 SGMLHYLSGGAWDPHDVNAVAATC---------ESSVQFWDLRSMGKTN--SIEHAH--VRNVDYDTKKKHLLVTAADE- 230 (346)
Q Consensus 165 ~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d- 230 (346)
.........+.+ ++..++.++. -..+.+||+.+.+-.. .+..+. ...+.+ ++. +++.|+.+
T Consensus 137 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~ 211 (306)
T 3ii7_A 137 LTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDK-IFAVGGQNG 211 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCEET
T ss_pred cCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCE-EEEEeCCCC
Confidence 111111222222 4555555553 3458899998764221 121111 222222 444 77777653
Q ss_pred ----CeEEEEEcccCCcceeeec---CCCcceEEEEeCCCCCcEEEEecCC-----CeEEEEecCC
Q 019059 231 ----SGIHLWDLRMLKAPIQELP---GHTHWTWAVCCNPEYDGFILSAGTD-----STVNLWLVST 284 (346)
Q Consensus 231 ----g~i~i~d~~~~~~~~~~~~---~~~~~v~~v~~~~~~~~~l~s~~~d-----~~i~iwd~~~ 284 (346)
..+.+||+.+. ....+. ........+.+ ++ .+++.|+.+ ..+.+||..+
T Consensus 212 ~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 212 LGGLDNVEYYDIKLN--EWKMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp TEEBCCEEEEETTTT--EEEECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTT
T ss_pred CCCCceEEEeeCCCC--cEEECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCC
Confidence 35888998752 122221 11112223333 45 777777754 4688888876
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.66 E-value=4.6 Score=32.70 Aligned_cols=135 Identities=9% Similarity=-0.031 Sum_probs=65.4
Q ss_pred EEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec----C-------CeEEEEEccCCCcc-
Q 019059 136 KLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC----E-------SSVQFWDLRSMGKT- 203 (346)
Q Consensus 136 ~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------~~i~i~d~~~~~~~- 203 (346)
++.++ ..+.+||..+.+- ...... .............++..++.|+. + ..+..||..+.+-.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W--~~~~~~--~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANEC--YCASLS--SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEET--TEEEEEETTTTEE--EEEECC--CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEcC--CceEEECCCCCeE--ecCCCC--CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 44444 6788999886542 221111 11111122222335666777763 1 12778898876521
Q ss_pred -ceeeccc--eeEEEeCCCCCcEEEEecCC--------CeEEEEEcccCCcceeeecC---CCcceEEEEeCCCCCcEEE
Q 019059 204 -NSIEHAH--VRNVDYDTKKKHLLVTAADE--------SGIHLWDLRMLKAPIQELPG---HTHWTWAVCCNPEYDGFIL 269 (346)
Q Consensus 204 -~~~~~~~--v~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~---~~~~v~~v~~~~~~~~~l~ 269 (346)
..+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+.. -..+.. .......+. .++ .+++
T Consensus 82 ~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~-~iyv 153 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA--LNS-IYVVGGREIKDGERCLDSVMCYDRLSFK--WGESDPLPYVVYGHTVLS--HMD-LVYV 153 (315)
T ss_dssp CCCBSSCEESCEEEEE--TTE-EEEECCEESSTTCCBCCCEEEEETTTTE--EEECCCCSSCCBSCEEEE--ETT-EEEE
T ss_pred CCCCCcchhceeEEEE--CCE-EEEEeCCcCCCCCcccceEEEECCCCCc--EeECCCCCCcccceeEEE--ECC-EEEE
Confidence 1122111 222222 444 77777632 358888887521 222211 111112222 344 6677
Q ss_pred EecC-C-----CeEEEEecCC
Q 019059 270 SAGT-D-----STVNLWLVST 284 (346)
Q Consensus 270 s~~~-d-----~~i~iwd~~~ 284 (346)
.|+. + ..+.+||..+
T Consensus 154 ~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 154 IGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp ECCBCTTSCBCCCEEEEETTT
T ss_pred EeCCCCCCcccceEEEEeCCC
Confidence 7765 2 3688888876
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.45 E-value=8.9 Score=35.62 Aligned_cols=224 Identities=9% Similarity=0.058 Sum_probs=118.6
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeee-eccCCceEEEEeecCCCCcEEEEecCC
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAAL-DAHVGKINCVLWWSSGRHDKLVSIDEE 143 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~d~ 143 (346)
...|.+|.-..+|..-+.+ .+| +..||-. ..+..... ......|.++.-..++. +.++.. .
T Consensus 21 ~n~V~~I~qD~~G~lWigT-----~~G-L~ryDG~---------~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigT~-~ 82 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGS-----NKG-LFSYDGY---------STQQHFTYGENNNTRIYCGVIIDNTY--LYMGTD-N 82 (758)
T ss_dssp CCCEEEEEECTTSCEEEEE-----SSC-EEEECSS---------CEEECSCTTSTTSSCEEEEEEETTTE--EEEEET-T
T ss_pred cceEEEEEECCCCCEEEEE-----CCC-ccccCCC---------ceEEEEccCCCCCceEEEEEEcCCCc--EEEEeC-C
Confidence 3568888777766544443 444 5556632 11111000 11234688887777665 555544 4
Q ss_pred eEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee------ccc-eeEEEe
Q 019059 144 NIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE------HAH-VRNVDY 216 (346)
Q Consensus 144 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------~~~-v~~~~~ 216 (346)
-+..||..+..-.. .. ......|..+.. .++ .+..++.+ .|..+|..+++.. .+. ... |.++..
T Consensus 83 Gl~~yd~~~~~f~~----~~-~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~ 153 (758)
T 3ott_A 83 GILVYNYRADRYEQ----PE-TDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIR 153 (758)
T ss_dssp EEEEEETTTTEECC----CS-CCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEE
T ss_pred CeEEEeCCCCEEEC----cc-cCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEE
Confidence 57889987542111 10 111224565544 234 46666655 6888998765432 221 112 888888
Q ss_pred CCCCCcEEEEecCCCeEEEEEcccCCcceeeecC------CCcceEEEEeCCCCCcEEEEecCCCeEEEEecCCCCCCCC
Q 019059 217 DTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG------HTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTSNHDEL 290 (346)
Q Consensus 217 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 290 (346)
.+++. +.+ +..+ -+..+|... . ....+.. ....|.++...+++ ..|..|+. +-+..+|..+
T Consensus 154 d~~g~-lWi-gt~~-Gl~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~------ 220 (758)
T 3ott_A 154 TKDNQ-IYV-GTYN-GLCRYIPSN-G-KFEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPST------ 220 (758)
T ss_dssp CTTCC-EEE-EETT-EEEEEETTT-T-EEEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTT------
T ss_pred cCCCC-EEE-EeCC-CHhhCccCC-C-ceEEecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCC------
Confidence 88887 444 4443 577788654 2 1222211 12347888777766 54444553 4577888765
Q ss_pred CcccccCCccccccccccccccccceeeEEEeCCCCCcEEEEeecCCeEEEeee
Q 019059 291 PSESLVESPNQRANSLLNSYSDYEDSVYGLAWSSREPWIFASLSYDGRVRNHML 344 (346)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~v~vw~~ 344 (346)
.+...........|.++...+++. +.+ |+.+| +.+++.
T Consensus 221 -------------~~~~~~~~l~~~~i~~i~~d~~g~-lWi-gT~~G-l~~~~~ 258 (758)
T 3ott_A 221 -------------GQIKQTEAFHNNSIKSLALDGNGD-LLA-GTDNG-LYVYHN 258 (758)
T ss_dssp -------------TEEEEEEEEEEEEEEEEEECTTCC-EEE-EETTE-EEEECC
T ss_pred -------------CeEEeccCCCCCeEEEEEEcCCCC-EEE-EeCCc-eeEEec
Confidence 221111011234588888888886 443 33444 556654
No 346
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.17 E-value=12 Score=36.71 Aligned_cols=222 Identities=9% Similarity=0.046 Sum_probs=110.6
Q ss_pred CeEEEEEecCCCC----eEEEeeeeccccceEEeeecCC----CCceEEEEeecCCcceEEEEecCcccCCCCCccceee
Q 019059 42 NEVHLLRLSSGGT----ELICEGLFSHPNEIWDLSSCPF----DQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERI 113 (346)
Q Consensus 42 ~~i~~~~~~~~~~----~~~~~~~~~h~~~v~~~~~~~~----~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~ 113 (346)
+.=.++++...+. .+........-++|.+++.... ...+++++ ..+.+|.+++..-.- ..+..
T Consensus 347 Gds~l~~~~~~~~~~~~~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~s-G~g~~gsL~~lr~Gi--------~~~~~ 417 (1158)
T 3ei3_A 347 GDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCS-GAFKEGSLRIIRNGI--------GIHEH 417 (1158)
T ss_dssp SCEEEEEECSSCCTTSCCEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEE-CCGGGCEEEEEEESB--------CEEEE
T ss_pred CCcEEEEEecCCCCccceEEeEeeecCcCCceeEEEEccCCCCCCeEEEEE-CcCCCCeEEEEecCC--------CEEEE
Confidence 3445566654322 1222333344578888887532 24565553 345678898876431 11222
Q ss_pred e--eeeccCCceEEEEeec---CCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec
Q 019059 114 A--ALDAHVGKINCVLWWS---SGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188 (346)
Q Consensus 114 ~--~~~~~~~~i~~~~~~~---~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 188 (346)
. .+. .-..++.+.... ...+ ++.+. .+.-.++.+... ...+............+.+-.+ + +..++=..
T Consensus 418 ~~~~l~-gv~~iWtl~~~~~~~~~~y-LvlS~-~~~T~Vl~i~~e-~veev~~~gf~~~~~TL~~~~l-~-~~~ivQVt- 490 (1158)
T 3ei3_A 418 ASIDLP-GIKGLWPLRSDPNRETDDT-LVLSF-VGQTRVLMLNGE-EVEETELMGFVDDQQTFFCGNV-A-HQQLIQIT- 490 (1158)
T ss_dssp EEECCC-SCCEEEEECCCSSCSSCCE-EEEEE-TTEEEEEEEETT-EEEEECCTTCCSSSCEEEEEEE-T-TTEEEEEE-
T ss_pred EeecCC-CccEEEEEeecCCCCCCCE-EEEEC-CCCeEEEEEeCC-cccccccccccCCCCcEEEEEc-C-CCeEEEEe-
Confidence 2 222 234566665432 2343 44443 334466666421 1111111111100111222222 1 22233333
Q ss_pred CCeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEEEecCCCeEEEEEcccCC-cceeeecCCCcceEEEEeCCCC
Q 019059 189 ESSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLK-APIQELPGHTHWTWAVCCNPEY 264 (346)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~v~~v~~~~~~ 264 (346)
...|++.+......+..+..+. |...+.+. . .++.+. ++.+.++.+.... ...... .-...|.|+++.|..
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~-~vvva~-g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~ 565 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEPQAKNISVASCNS--S-QVVVAV-GRALYYLQIHPQELRQISHT-EMEHEVACLDITPLG 565 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCTTCCCCCEEEECS--S-EEEEEE-TTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCS
T ss_pred cCEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--C-EEEEEE-CCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCC
Confidence 3457788876555555554322 66656553 3 344444 5788888776421 111111 235679999998643
Q ss_pred -----CcEEEEecC-CCeEEEEecCC
Q 019059 265 -----DGFILSAGT-DSTVNLWLVST 284 (346)
Q Consensus 265 -----~~~l~s~~~-d~~i~iwd~~~ 284 (346)
..+++.|.. |++|+|+++..
T Consensus 566 ~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 566 DSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp SSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred CCcccccEEEEEECCCCEEEEEECCC
Confidence 268899986 99999999975
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.01 E-value=8.9 Score=33.23 Aligned_cols=108 Identities=13% Similarity=0.056 Sum_probs=58.6
Q ss_pred CceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeec---ccC----CCceeeEEEEeCCC---CCcEEEE-ec-
Q 019059 121 GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSK---QSS----GMLHYLSGGAWDPH---DVNAVAA-TC- 188 (346)
Q Consensus 121 ~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~----~~~~~v~~~~~~~~---~~~l~~~-~~- 188 (346)
..-..|+|.|++..-++++...|.|++++.+.......+... ... .....+..++|+|+ ...|++. +.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 345789999999622556666899999975432111111111 000 11346789999996 2334433 22
Q ss_pred -C----------CeEEEEEccCC----------Cccceee---ccc-eeEEEeCCCCCcEEEEecC
Q 019059 189 -E----------SSVQFWDLRSM----------GKTNSIE---HAH-VRNVDYDTKKKHLLVTAAD 229 (346)
Q Consensus 189 -d----------~~i~i~d~~~~----------~~~~~~~---~~~-v~~~~~~~~~~~~l~~~~~ 229 (346)
+ ..|.-|.+..+ +.+..+. ..| ...|+|.|||. ++++.++
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 1 13444655431 1111222 134 88999999997 6665443
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.11 E-value=14 Score=34.07 Aligned_cols=136 Identities=11% Similarity=0.065 Sum_probs=66.4
Q ss_pred eEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCC--eEEEEEcCCCCCCceeeec--ccCCC
Q 019059 92 GAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEE--NIFLWSLDCSNKNAQVQSK--QSSGM 167 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~--~~~~~ 167 (346)
.+.+||.. ...+..+..+...... .+++...++. +++.||.++ .+.+||..+.. ...... .....
T Consensus 469 dv~~yd~~-------t~~W~~~~~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 469 DNWIFDMK-------TREWSMIKSLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQN 537 (695)
T ss_dssp CCEEEETT-------TTEEEECCCCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGS
T ss_pred cEEEEeCC-------CCcEEECCCCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCc
Confidence 46777776 2234444333222222 2222223454 677775433 78999987643 222111 01111
Q ss_pred ceeeEEEEeCCC-CCcEEEEec--C-----CeEEEEEccCCCc-----cceee----ccc--eeEEEeCCCCCcEEEEec
Q 019059 168 LHYLSGGAWDPH-DVNAVAATC--E-----SSVQFWDLRSMGK-----TNSIE----HAH--VRNVDYDTKKKHLLVTAA 228 (346)
Q Consensus 168 ~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~~-----~~~~~----~~~--v~~~~~~~~~~~~l~~~~ 228 (346)
......+.+..+ +..++.|+. + ..+.+||+.+.+. -..+. .+. ...+.+ .++. +++.|+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~-iyv~GG 615 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRK-LLIVGG 615 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTE-EEEECC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCE-EEEECC
Confidence 112233455544 455666654 2 4688999988762 11111 111 222333 2244 777776
Q ss_pred C--------CCeEEEEEccc
Q 019059 229 D--------ESGIHLWDLRM 240 (346)
Q Consensus 229 ~--------dg~i~i~d~~~ 240 (346)
. ...+.+||+.+
T Consensus 616 ~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 616 TSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp BCSSCCCCTTTSEEEEETTT
T ss_pred ccCCCCCCCCCeEEEEECCC
Confidence 3 34688999875
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=88.54 E-value=9.3 Score=31.46 Aligned_cols=47 Identities=9% Similarity=0.008 Sum_probs=24.6
Q ss_pred CeEEEEEccCCCccc--eeeccc-e-eEEEeCCCCCcEEEEecC------CCeEEEEEc
Q 019059 190 SSVQFWDLRSMGKTN--SIEHAH-V-RNVDYDTKKKHLLVTAAD------ESGIHLWDL 238 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~--~~~~~~-v-~~~~~~~~~~~~l~~~~~------dg~i~i~d~ 238 (346)
..+.+||+.+.+-.. .+.... . .+++.. ++. +++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDK-TWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTE-EEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCE-EEEEeeecCCCcccCceEEEEe
Confidence 578999988765322 121111 1 223322 344 6777663 235777876
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.67 E-value=9.8 Score=30.73 Aligned_cols=99 Identities=6% Similarity=0.021 Sum_probs=48.3
Q ss_pred CcEEEEecC-------CeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec------CCeEEEEEccCC
Q 019059 134 HDKLVSIDE-------ENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC------ESSVQFWDLRSM 200 (346)
Q Consensus 134 ~~~~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~ 200 (346)
.+++.++.+ ..+.+||..+.+ ...... ..........+. .++..++.|+. -..+.+||+.+.
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKN-LPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECC-CSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCC--EeECCC-CCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 367777643 357788877543 222111 111111112222 24555566653 245899999876
Q ss_pred Cccc--eeeccc--eeEEEeCCCCCcEEEEecCC-----CeEEEEEccc
Q 019059 201 GKTN--SIEHAH--VRNVDYDTKKKHLLVTAADE-----SGIHLWDLRM 240 (346)
Q Consensus 201 ~~~~--~~~~~~--v~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 240 (346)
+-.. .+..+. ...+.+ ++. +++.|+.+ ..+.+||+.+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTT
T ss_pred EEEECCCCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCC
Confidence 5221 111111 222332 344 77776643 3577888875
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.50 E-value=1.3 Score=36.62 Aligned_cols=103 Identities=13% Similarity=0.034 Sum_probs=59.3
Q ss_pred CcEEEEecCCeEEEEEccCCCccceeecc--c-eeEEEe--CCCCCcEEEEe-cCCCeEEEEEcccCCcceeeecC----
Q 019059 181 VNAVAATCESSVQFWDLRSMGKTNSIEHA--H-VRNVDY--DTKKKHLLVTA-ADESGIHLWDLRMLKAPIQELPG---- 250 (346)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~-v~~~~~--~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~---- 250 (346)
..+++++.||.|+-+|..+|+..-.+... . +....- .+.+...++.. ..||.+..+|..+ +.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~-G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ-GLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT-EEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC-CcEEeeeccccce
Confidence 46888889999999999999877776643 1 111110 01122244443 5789999998765 322211110
Q ss_pred CCcceEE---EEe-C----CCCCcEEEEecCCCeEEEEecCCC
Q 019059 251 HTHWTWA---VCC-N----PEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 251 ~~~~v~~---v~~-~----~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
...++.. ... . ..+ ..+++|+.++.+...|++++
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~-g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVED-EKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp TTCSEEEECC----------CC-EEEEECEEEEEEEEEETTTC
T ss_pred eccccccCCCceeecccccccC-CEEEEEecCCEEEEEECCCC
Confidence 1112211 000 0 033 57889999999998888875
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.50 E-value=25 Score=33.80 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=31.2
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCCcccee
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSI 206 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (346)
.+.+++..++..++++.+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4566777778889999999999999999999876654
No 353
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=81.26 E-value=36 Score=31.87 Aligned_cols=155 Identities=7% Similarity=0.029 Sum_probs=71.5
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec----cCCceEEEEeecCCCCcEEEEe
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----HVGKINCVLWWSSGRHDKLVSI 140 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~ 140 (346)
.+.|.+|+++|..+.++.+. ...+.|...+=. ..+.+++..... ....|.++++.|.....++++.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~---~~~ggv~rS~Dg-------G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~ 83 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYAR---TDIGGAYRWDAG-------TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQ 83 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEE---ESSSCEEEEETT-------TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEE---ecCCCEEEecCC-------CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEe
Confidence 46899999999765544442 344444433311 113333322111 1346899999986543455543
Q ss_pred cCCe----EEEEEcCCCCCCceeeecccC--C---CceeeEEEEeCCCC-CcEEEEecCCeEEEEEccCCCccceee---
Q 019059 141 DEEN----IFLWSLDCSNKNAQVQSKQSS--G---MLHYLSGGAWDPHD-VNAVAATCESSVQFWDLRSMGKTNSIE--- 207 (346)
Q Consensus 141 ~d~~----i~vwd~~~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--- 207 (346)
.+.. -.||.-..+....+....... + ....+..++++|.. ..++++...+.|.. ....++.=..+.
T Consensus 84 g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~ 162 (789)
T 1sqj_A 84 GRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIP 162 (789)
T ss_dssp CSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSC
T ss_pred CccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCc
Confidence 2211 344444443333333322110 0 01134567777754 34555543443321 222222111111
Q ss_pred ----ccc-eeEEEeCCCCCcEEEEecCC
Q 019059 208 ----HAH-VRNVDYDTKKKHLLVTAADE 230 (346)
Q Consensus 208 ----~~~-v~~~~~~~~~~~~l~~~~~d 230 (346)
... +..+.++|.....++++..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 112 88899988654345555443
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=78.73 E-value=23 Score=28.17 Aligned_cols=181 Identities=12% Similarity=0.031 Sum_probs=93.8
Q ss_pred ceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeeccCCceEEEEeecCCCCcEEEEecCCeEE
Q 019059 67 EIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIF 146 (346)
Q Consensus 67 ~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~i~ 146 (346)
.|..++... .+.++. . |+.|..|-..... + -+.+. .....|..++-..... ++. . ||.|+
T Consensus 25 ~i~~ia~G~--~h~~~l----~-~G~v~~wG~n~~G-q----lg~p~----~~~~~i~~ia~G~~hs--~~l-~-~G~v~ 84 (282)
T 3qhy_B 25 GVDAIAGGY--FHGLAL----K-GGKVLGWGANLNG-Q----LTMPA----ATQSGVDAIAAGNYHS--LAL-K-DGEVI 84 (282)
T ss_dssp SCCEEEECS--SEEEEE----E-TTEEEEEECCSSS-T----TSCCG----GGGSCCCEEEECSSEE--EEE-E-TTEEE
T ss_pred CCcEEEeCC--CeEEEE----E-CCEEEEEeCCCCC-C----CCCCc----cCCCCEEEEEeCCCEE--EEE-E-CCEEE
Confidence 566666543 233332 2 7788888754210 0 00111 1123566666543322 333 3 89999
Q ss_pred EEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccc-eeeccc-eeEEEeCCCCCcEE
Q 019059 147 LWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTN-SIEHAH-VRNVDYDTKKKHLL 224 (346)
Q Consensus 147 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l 224 (346)
.|-.....+.... .. ....|..++... .+.++-. +|.|+.|-....-.+. ...... |..++...... +
T Consensus 85 ~wG~n~~Gqlg~P--~~---~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~--~ 154 (282)
T 3qhy_B 85 AWGGNEDGQTTVP--AE---ARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA--L 154 (282)
T ss_dssp EEECCTTSTTCCC--GG---GSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE--E
T ss_pred EeeCCCCCCCCCC--cc---cCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE--E
Confidence 9987654333211 11 112566666543 3444445 9999999876432221 111112 77777765542 3
Q ss_pred EEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 225 VTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 225 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
+.. ||.|..|-.....+.-... .-...|..|+.... ..++. .||.|..|=...
T Consensus 155 ~l~--~G~v~~wG~n~~gqlg~p~-~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 155 AVK--NGGVIAWGDNYFGQTTVPA-EAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp EEE--TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSS--EEEEE--ETTEEEEEECCT
T ss_pred EEE--CCEEEEecCCCCCCCCCce-ecCCCeEEEEecCC--EEEEE--ECCeEEEEECCC
Confidence 332 6999999765433221111 11345777765543 33444 599999997664
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=71.95 E-value=43 Score=28.06 Aligned_cols=163 Identities=8% Similarity=0.069 Sum_probs=85.6
Q ss_pred eEEEEecCcccCCCCCccc--eeeeeeecc------CCceEEEEee---cC---CCCcEEEE-ecCCeEEEEEcCCCCCC
Q 019059 92 GAAIWQIPELYGQLNSPQL--ERIAALDAH------VGKINCVLWW---SS---GRHDKLVS-IDEENIFLWSLDCSNKN 156 (346)
Q Consensus 92 ~i~vw~~~~~~~~~~~~~~--~~~~~~~~~------~~~i~~~~~~---~~---~~~~~~~~-~~d~~i~vwd~~~~~~~ 156 (346)
+|.+||+. +. +.++++.-. .+.+..+.+. +. +...++.+ .....|.|+|+.+++..
T Consensus 124 kLv~~DL~---------t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 124 AIVAYDLK---------QPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW 194 (381)
T ss_dssp EEEEEESS---------STTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEECC---------CCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE
Confidence 56777777 34 555554321 3456777776 22 12234444 55789999999877543
Q ss_pred ceeeecccC---------CC----ceeeEEEEeCCC----CCcEEEEecCC-eEEEEE---ccCCCc---cceee-cc--
Q 019059 157 AQVQSKQSS---------GM----LHYLSGGAWDPH----DVNAVAATCES-SVQFWD---LRSMGK---TNSIE-HA-- 209 (346)
Q Consensus 157 ~~~~~~~~~---------~~----~~~v~~~~~~~~----~~~l~~~~~d~-~i~i~d---~~~~~~---~~~~~-~~-- 209 (346)
......... +. ...+.+++.+|+ ++.|+...-.+ .++--. ++.... +..+. .+
T Consensus 195 Rv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~ 274 (381)
T 3q6k_A 195 NVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKY 274 (381)
T ss_dssp EEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTT
T ss_pred EEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCC
Confidence 322110000 11 136788899987 66676665433 344333 222221 11111 11
Q ss_pred -ceeEEEeC-CCCCcEEEEecCCCeEEEEEccc-CC--cceeeec--CCCcceEEEEeCCCC
Q 019059 210 -HVRNVDYD-TKKKHLLVTAADESGIHLWDLRM-LK--APIQELP--GHTHWTWAVCCNPEY 264 (346)
Q Consensus 210 -~v~~~~~~-~~~~~~l~~~~~dg~i~i~d~~~-~~--~~~~~~~--~~~~~v~~v~~~~~~ 264 (346)
+-..++.+ .+|. ++++--....|..|+... .- .....+. ..-..+..+.+.++|
T Consensus 275 s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g 335 (381)
T 3q6k_A 275 NDAIALAYDPKTKV-IFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKG 335 (381)
T ss_dssp CCEEEEEECTTTCE-EEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTS
T ss_pred CCcceEEEeCCCCe-EEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCC
Confidence 13456675 5665 777777888999999874 11 1122222 112345666666666
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=67.44 E-value=54 Score=27.35 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=26.5
Q ss_pred cEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCC-CCCcEEEEecCC
Q 019059 135 DKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDP-HDVNAVAATCES 190 (346)
Q Consensus 135 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 190 (346)
.+.++...| +.+++...+........... ....+.++++.| +...+.+++..+
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~--~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVF--LGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEES--TTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccC--CCCceEEEEECCCCCCeEEEEecCC
Confidence 366666555 55555432222222221111 123789999998 344566666555
No 357
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=65.89 E-value=48 Score=26.27 Aligned_cols=142 Identities=11% Similarity=0.047 Sum_probs=75.1
Q ss_pred ceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEccCCC
Q 019059 122 KINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMG 201 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (346)
.|..++--.. +.++. . |+.|+.|-.....+..... . ....|..++... .+.++-. ||.|+.|-....-
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~p~--~---~~~~i~~ia~G~--~hs~~l~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTMPA--A---TQSGVDAIAAGN--YHSLALK-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSCCG--G---GGSCCCEEEECS--SEEEEEE-TTEEEEEECCTTS
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCCCc--c---CCCCEEEEEeCC--CEEEEEE-CCEEEEeeCCCCC
Confidence 4566654332 21333 4 8999999876544332111 1 122566666543 2333334 8999999866432
Q ss_pred ccce-eec-cceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEE
Q 019059 202 KTNS-IEH-AHVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (346)
Q Consensus 202 ~~~~-~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~i 279 (346)
.+.. ... ..|..++...... ++. . +|.|+.|-.....+.-.. ......|..++..... .+.-. ||.|..
T Consensus 93 qlg~P~~~~~~v~~ia~G~~hs--~al-~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~---~~~l~-~G~v~~ 163 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAWAS--YAL-K-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYT---ALAVK-NGGVIA 163 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETTEE--EEE-E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSE---EEEEE-TTEEEE
T ss_pred CCCCCcccCCCeEEEECcCCEE--EEE-e-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCE---EEEEE-CCEEEE
Confidence 2211 111 1277777765543 333 3 899999976543322111 1123457776654432 22234 799999
Q ss_pred EecCC
Q 019059 280 WLVST 284 (346)
Q Consensus 280 wd~~~ 284 (346)
|-...
T Consensus 164 wG~n~ 168 (282)
T 3qhy_B 164 WGDNY 168 (282)
T ss_dssp EECCT
T ss_pred ecCCC
Confidence 97665
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.05 E-value=60 Score=27.04 Aligned_cols=144 Identities=6% Similarity=-0.068 Sum_probs=68.6
Q ss_pred ceEEEEeecCC-CCcEEEEecCCeEEEEEcCCCCCCceeeecc---c------------CCCceeeEEEEeCCC-CCcEE
Q 019059 122 KINCVLWWSSG-RHDKLVSIDEENIFLWSLDCSNKNAQVQSKQ---S------------SGMLHYLSGGAWDPH-DVNAV 184 (346)
Q Consensus 122 ~i~~~~~~~~~-~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~---~------------~~~~~~v~~~~~~~~-~~~l~ 184 (346)
.|.++++.|.+ ...+.++...+.|... ..+....+..... . ......+..+.++|. ...++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S--~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRS--TDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEE--SSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEE--cCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 57888888742 2236666556655444 3322222222110 0 011235788999884 45566
Q ss_pred EEecCCeEEEEEccCCCccceee--------c------cc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeec
Q 019059 185 AATCESSVQFWDLRSMGKTNSIE--------H------AH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELP 249 (346)
Q Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~~--------~------~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 249 (346)
++..++.|...+ ..++.-..+. + +. +.+|+++|.....+..+...+ |...+- .......+.
T Consensus 194 vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D--~G~tW~~~~ 269 (394)
T 3b7f_A 194 IGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR--REGVWKRIG 269 (394)
T ss_dssp EEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET--TTTEEECGG
T ss_pred EEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC--CCCcceECC
Confidence 666555454432 1122111110 0 23 789999987433566665544 433331 122222221
Q ss_pred C--CC---cceEEEEeCCCCCcEEEEe
Q 019059 250 G--HT---HWTWAVCCNPEYDGFILSA 271 (346)
Q Consensus 250 ~--~~---~~v~~v~~~~~~~~~l~s~ 271 (346)
. .. ..+..+.++|..+..|..+
T Consensus 270 ~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 270 DAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp GGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCCCCccceEEEEECCCCCCEEEEE
Confidence 1 11 2356788876443444444
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.87 E-value=43 Score=30.01 Aligned_cols=59 Identities=10% Similarity=0.046 Sum_probs=35.6
Q ss_pred eEEEEeCCCCCcEEEEecCC------------CeEEEEecCCCCCCCCCcccccCCccccccccccccccc-cceeeEEE
Q 019059 255 TWAVCCNPEYDGFILSAGTD------------STVNLWLVSTSNHDELPSESLVESPNQRANSLLNSYSDY-EDSVYGLA 321 (346)
Q Consensus 255 v~~v~~~~~~~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~ 321 (346)
.-.|.|+|.| .+++.-..+ +.+.+.+..+ ++....+.+. ...++.++
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~-------------------g~~~rf~~~P~gaE~TG~~ 537 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPAT-------------------GEIRRFMVGPIGCEVTGIS 537 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTT-------------------CCEEEEEECCTTCEEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCC-------------------CeEEEEEeCCCCccCcCee
Confidence 4568899999 655543221 2344444443 4443333333 45799999
Q ss_pred eCCCCCcEEEEe
Q 019059 322 WSSREPWIFASL 333 (346)
Q Consensus 322 ~~~~~~~~l~s~ 333 (346)
|+||++.+++..
T Consensus 538 fspDg~tlfvni 549 (592)
T 3zwu_A 538 FSPDQKTLFVGI 549 (592)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999998666653
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.26 E-value=52 Score=29.39 Aligned_cols=59 Identities=12% Similarity=0.084 Sum_probs=39.5
Q ss_pred eeeEEEEeCCCCCcEEEEec------------CCeEEEEEccCCCccceeecc--c-eeEEEeCCCCCcEEEEe
Q 019059 169 HYLSGGAWDPHDVNAVAATC------------ESSVQFWDLRSMGKTNSIEHA--H-VRNVDYDTKKKHLLVTA 227 (346)
Q Consensus 169 ~~v~~~~~~~~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~--~-v~~~~~~~~~~~~l~~~ 227 (346)
.....|.|.++|.+.+.... ...+..++..+++....+... . ++.++|+||++.+++..
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678999999876664422 125777777777755544322 2 89999999998555544
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.14 E-value=41 Score=30.16 Aligned_cols=56 Identities=13% Similarity=0.097 Sum_probs=35.9
Q ss_pred eeEEEEeCCCCCcEEEEecC------------CeEEEEEccCCCccceeeccc---eeEEEeCCCCCcEEE
Q 019059 170 YLSGGAWDPHDVNAVAATCE------------SSVQFWDLRSMGKTNSIEHAH---VRNVDYDTKKKHLLV 225 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~---v~~~~~~~~~~~~l~ 225 (346)
..-.|+|+|.|.+++....+ ..+.+.+..+++..+.+.... ++.++|+||++.+++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 44668999999855554322 235566666666554443222 999999999985444
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=52.68 E-value=84 Score=24.83 Aligned_cols=159 Identities=9% Similarity=-0.033 Sum_probs=83.9
Q ss_pred CCceEEEEeec--CCCCcEEEEecCCeEEEEEcCCCCC-CceeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEE
Q 019059 120 VGKINCVLWWS--SGRHDKLVSIDEENIFLWSLDCSNK-NAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWD 196 (346)
Q Consensus 120 ~~~i~~~~~~~--~~~~~~~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 196 (346)
.+.|..+-. + +.. .++..+.+|.++...+..-.. ..-....... ....+..+........++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~-~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGN-RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCS-EEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCC-EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEE
Confidence 455666543 3 344 366667799999998764320 0011111111 122455555555566788888899888877
Q ss_pred ccCCC---------ccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc------ceeeecCCCcceEEEEe
Q 019059 197 LRSMG---------KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA------PIQELPGHTHWTWAVCC 260 (346)
Q Consensus 197 ~~~~~---------~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~~v~~v~~ 260 (346)
...-. ....+..+. |..+...+++. .++..+..|.++...+..... -+..+ ...+.+..+..
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~ 221 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIP 221 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEE
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEE
Confidence 54211 112233333 44443334444 566777889998887754221 12222 12334444433
Q ss_pred CCCCCcEEEEecCCCeEEE--EecCC
Q 019059 261 NPEYDGFILSAGTDSTVNL--WLVST 284 (346)
Q Consensus 261 ~~~~~~~l~s~~~d~~i~i--wd~~~ 284 (346)
.... ..++..+.+|.+.. ++...
T Consensus 222 ~~~~-~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 222 IKEE-VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ESSE-EEEEEEETTSCEEEEEEEGGG
T ss_pred eCCC-CEEEEEcCCCeEEEeeeCHHH
Confidence 2233 45666677777766 76654
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.74 E-value=9.3 Score=37.53 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=30.1
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE 207 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 207 (346)
.+.+++..++..++++.+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34555666777889999999999999999998766543
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=46.72 E-value=1.3e+02 Score=25.22 Aligned_cols=156 Identities=10% Similarity=0.026 Sum_probs=71.2
Q ss_pred CeEEEEEecCCCCeEEEeeeec-----cccceEEeeec---CC---CCceEEEEeecCCcceEEEEecCcccC-----CC
Q 019059 42 NEVHLLRLSSGGTELICEGLFS-----HPNEIWDLSSC---PF---DQRIFSTVFSTGESYGAAIWQIPELYG-----QL 105 (346)
Q Consensus 42 ~~i~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~---~~---~~~l~~~~~~~~~d~~i~vw~~~~~~~-----~~ 105 (346)
-++.++++..++..+.....+. ....+.++++. |. +...+..+ ......|.|+|+..... ..
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYIt--D~~~~gLIVydl~~~~swRv~~~~ 200 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYIT--NFLRGALFIYDHKKQDSWNVTHPT 200 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEE--ETTTTEEEEEETTTTEEEEEECGG
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEE--cCCCCcEEEEECCCCcEEEEccCC
Confidence 3566666666521232222111 23457777776 32 12233332 34467899999873210 00
Q ss_pred CCccceeeeeeecc----CCceEEEEeecC----CCCcEEEEecCCeEEEEE---cCCCCCCceeeecccCCCceeeEEE
Q 019059 106 NSPQLERIAALDAH----VGKINCVLWWSS----GRHDKLVSIDEENIFLWS---LDCSNKNAQVQSKQSSGMLHYLSGG 174 (346)
Q Consensus 106 ~~~~~~~~~~~~~~----~~~i~~~~~~~~----~~~~~~~~~~d~~i~vwd---~~~~~~~~~~~~~~~~~~~~~v~~~ 174 (346)
-.+.......+.+. ...|..++.+|+ ++.+++..-....++--. ++.......+......+....-..+
T Consensus 201 ~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 201 FKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp GSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred CccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 00000000111111 246889999998 665444443233333332 1221111111111111211234455
Q ss_pred EeC-CCCCcEEEEecCCeEEEEEccC
Q 019059 175 AWD-PHDVNAVAATCESSVQFWDLRS 199 (346)
Q Consensus 175 ~~~-~~~~~l~~~~~d~~i~i~d~~~ 199 (346)
+.. .+|..+++--....|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 675 4555555555788999999875
No 365
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=46.23 E-value=1.9e+02 Score=27.02 Aligned_cols=150 Identities=12% Similarity=0.076 Sum_probs=75.3
Q ss_pred CCceEEEEeecCCCCcEEEEecCCeEEEEEcCCCCCCceeeecccC-C--CceeeEEEEeCCCC-CcEEEEecC------
Q 019059 120 VGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQVQSKQSS-G--MLHYLSGGAWDPHD-VNAVAATCE------ 189 (346)
Q Consensus 120 ~~~i~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~-~~l~~~~~d------ 189 (346)
...|.++.++|.....++++...+.|...+ .+....+....... . ....+.++++.|.. ..++++..+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~--DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD--AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec--CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 458999999998776688887667665544 22222222221100 0 12368899998853 345454432
Q ss_pred CeEEEEEccCCCccceee---------cc--ceeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceeeecC------CC
Q 019059 190 SSVQFWDLRSMGKTNSIE---------HA--HVRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPG------HT 252 (346)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~---------~~--~v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~ 252 (346)
+.|. .....++.=..+. .+ .+..++++|.....+..+...+.| |-.....+.-..+.. ..
T Consensus 92 ~~v~-~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 92 AAFY-VSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp CEEE-EESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTT
T ss_pred cEEE-EECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCC
Confidence 2332 2222232111111 01 145678887654456666533333 322222222222221 12
Q ss_pred cceEEEEeCCCCCcEEEEecCC
Q 019059 253 HWTWAVCCNPEYDGFILSAGTD 274 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d 274 (346)
..+..+.++|..+..++.+..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4578889988654556665544
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.86 E-value=14 Score=36.37 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=24.9
Q ss_pred ceEEEEeCCCCCcEEEEecCCCeEEEEecCCC
Q 019059 254 WTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 254 ~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
.+.+++..++. .++++-+.|+++|||++.++
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCC
Confidence 34445556676 89999999999999999886
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=43.73 E-value=30 Score=31.79 Aligned_cols=36 Identities=19% Similarity=0.375 Sum_probs=27.5
Q ss_pred eeEEEEeCCCCCcEEEEecCCeEEEEEccCCCccceee
Q 019059 170 YLSGGAWDPHDVNAVAATCESSVQFWDLRSMGKTNSIE 207 (346)
Q Consensus 170 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 207 (346)
.|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3554444 46789999999999999999988665443
No 368
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.99 E-value=2e+02 Score=26.47 Aligned_cols=94 Identities=9% Similarity=0.107 Sum_probs=54.9
Q ss_pred cCCeEEEEEccCCC-------ccce-eeccc---eeEEEeCCCCCcEEEEecCCCe--EEEEEcccCCcceee-ecCC-C
Q 019059 188 CESSVQFWDLRSMG-------KTNS-IEHAH---VRNVDYDTKKKHLLVTAADESG--IHLWDLRMLKAPIQE-LPGH-T 252 (346)
Q Consensus 188 ~d~~i~i~d~~~~~-------~~~~-~~~~~---v~~~~~~~~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~-~~~~-~ 252 (346)
..+.|...|+.++. .... +.+.. +..+.|..+. ++++...++. +.++|+....-.... +... .
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~ 395 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR--VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ 395 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC--EEEEEEETTEEEEEEECEETTEECCCEEECCCST
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE--EEEEEEECCEEEEEEEECCCCceEEEeccCCCCC
Confidence 36789999988742 2222 32222 8889998763 7777777774 667776542101222 2211 2
Q ss_pred cceEEEEeCCCCCcEEEEecC---CCeEEEEecC
Q 019059 253 HWTWAVCCNPEYDGFILSAGT---DSTVNLWLVS 283 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~---d~~i~iwd~~ 283 (346)
..+.....++++..++++.+. -..+..+|+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 396 NAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred eEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 456666777777556655543 2467777764
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=40.47 E-value=2e+02 Score=25.72 Aligned_cols=62 Identities=8% Similarity=0.052 Sum_probs=37.3
Q ss_pred ceEEEEeecCCCCcEEEE-ec-----------CCeEEEEEcCCCCCCceeeecccCCCceeeEEEEeCCCCCcEEEEec
Q 019059 122 KINCVLWWSSGRHDKLVS-ID-----------EENIFLWSLDCSNKNAQVQSKQSSGMLHYLSGGAWDPHDVNAVAATC 188 (346)
Q Consensus 122 ~i~~~~~~~~~~~~~~~~-~~-----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 188 (346)
....|.|.++|. |.+++ .. ...+..++..+++ ...+.... ....++.++|+||++.|+++-.
T Consensus 477 sPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P---~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGP---IGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECC---TTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCC---CCccccCCEECCCCCEEEEEEe
Confidence 356789999987 45534 11 1145555554443 22332211 1237899999999999888753
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.22 E-value=33 Score=31.51 Aligned_cols=30 Identities=3% Similarity=0.161 Sum_probs=23.9
Q ss_pred cceEEEEeCCCCCcEEEEecCCCeEEEEecCCC
Q 019059 253 HWTWAVCCNPEYDGFILSAGTDSTVNLWLVSTS 285 (346)
Q Consensus 253 ~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~~ 285 (346)
..|.++.+. . .++++-+.|.++|+|+++++
T Consensus 222 ~~Is~~~~~--~-~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 222 SVISCKLFH--E-RYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp CEEEEEEET--T-TEEEEEETTCEEEEEETTTT
T ss_pred ceEEEeccC--C-cEEEEEEcCCeEEEEEcCCC
Confidence 346655553 4 79999999999999999985
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=40.20 E-value=1.4e+02 Score=23.63 Aligned_cols=112 Identities=10% Similarity=0.033 Sum_probs=64.4
Q ss_pred eeEEEEeCC-CCCcEEEEecCCeEEEEEccCCC------ccceeeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccC
Q 019059 170 YLSGGAWDP-HDVNAVAATCESSVQFWDLRSMG------KTNSIEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRML 241 (346)
Q Consensus 170 ~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 241 (346)
.+..+.... +...++..+.+|.++...+..-. ....+..+. +..+....... .++..+..|.+..+.....
T Consensus 69 ~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~ei 147 (276)
T 3no0_A 69 KIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDET-HILLFTKKGRVARFSVREV 147 (276)
T ss_dssp CEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGS
T ss_pred EEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhC
Confidence 455543321 45788999999999998876532 122233233 44444444444 5666677898888876432
Q ss_pred Cc--------ceeeecCCCcceEEEEeCCCCCcEEEEecCCCeEEEEecCC
Q 019059 242 KA--------PIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLWLVST 284 (346)
Q Consensus 242 ~~--------~~~~~~~~~~~v~~v~~~~~~~~~l~s~~~d~~i~iwd~~~ 284 (346)
.. ....+.. ...|..+...+++ ..++..+..|.++...+..
T Consensus 148 p~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~-~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 148 PPSTPGARGVQGIKLEK-NDETSGLRIWNGE-PYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CBCCTTCCCEECCCCCT-TCCEEEEEEESSC-SEEEEEETTSCEEEEEGGG
T ss_pred CCcCCCCCCEEEEccCC-CCEEEEEEEeCCC-CEEEEEeCCCcEEEeEHHH
Confidence 11 1111222 2445544444444 6778888889888887764
No 372
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=37.18 E-value=2.9e+02 Score=26.54 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=27.7
Q ss_pred eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCcceee
Q 019059 211 VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQE 247 (346)
Q Consensus 211 v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 247 (346)
+.+++..++.. ++++-+.|+++|+|++.+ ++++.+
T Consensus 238 ~~~~~~~~~~~-~lftl~~D~~LRiWsl~t-~~~v~t 272 (950)
T 4gq2_M 238 IISMIFLSTYN-VLVMLSLDYKLKVLDLST-NQCVET 272 (950)
T ss_dssp EEEEEEETTTT-EEEEEETTCEEEEEETTT-TEEEEE
T ss_pred EEEEeecCCCc-EEEEEECCCEEEEEECCC-CCeEee
Confidence 66777777776 788999999999999987 445544
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.86 E-value=1.8e+02 Score=25.43 Aligned_cols=56 Identities=9% Similarity=-0.011 Sum_probs=36.4
Q ss_pred EEEEecCCCeEEEEEcc-cC------CcceeeecC--CCcceEEEEeCCCCCcEEEEecCCCeEEE
Q 019059 223 LLVTAADESGIHLWDLR-ML------KAPIQELPG--HTHWTWAVCCNPEYDGFILSAGTDSTVNL 279 (346)
Q Consensus 223 ~l~~~~~dg~i~i~d~~-~~------~~~~~~~~~--~~~~v~~v~~~~~~~~~l~s~~~d~~i~i 279 (346)
+++.|..+|.|+-.-+. .. ...+..+.. ...+|..+.++++. .+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~-~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQ-QQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTT-TEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCC-CEEEEEECCeEEEE
Confidence 56778888877544332 11 112333332 35789999999998 89999998876654
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=26.55 E-value=2.6e+02 Score=22.71 Aligned_cols=211 Identities=8% Similarity=0.038 Sum_probs=101.8
Q ss_pred ccceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeee---eeccCCceEEEEeec---CCCCcEEE
Q 019059 65 PNEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAA---LDAHVGKINCVLWWS---SGRHDKLV 138 (346)
Q Consensus 65 ~~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~---~~~~~~~~ 138 (346)
.+.+..+........++... +.|.-..+.+|+++.. .....+.++.. +. ....|.++...+ +.. .++.
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT-~~Gr~y~~~~~~lp~~---~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~-~~v~ 114 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFT-TQGRVYRAKAYDLPEA---SRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAP-YLVL 114 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEE-TTSEEEEEEGGGSCBC---CSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSS-EEEE
T ss_pred CCEEEEEEEeCCCCEEEEEe-CCCeEEEEEHHHCcCC---CccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCC-EEEE
Confidence 34454444444344444332 1233334555666532 11123343322 32 234555554333 344 3666
Q ss_pred EecCCeEEEEEcCCCCCCc--eeeecccCCCceeeEEEEeCCCCCcEEEEecCCeEEEEEcc--CCC---------ccce
Q 019059 139 SIDEENIFLWSLDCSNKNA--QVQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLR--SMG---------KTNS 205 (346)
Q Consensus 139 ~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~---------~~~~ 205 (346)
.+.+|.++...+..-.... -........ ...+..+........++..+..|.+..+... .-. ....
T Consensus 115 ~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~ 193 (327)
T 3uc1_A 115 ATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMR 193 (327)
T ss_dssp EETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSC
T ss_pred EcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeec
Confidence 6779999998876422111 111111111 2244444444455678888889988877766 211 1122
Q ss_pred eeccc-eeEEEeCCCCCcEEEEecCCCeEEEEEcccCCc------ceeeec--CCCcceEEEEeCCCCCcEEEEecCCCe
Q 019059 206 IEHAH-VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKA------PIQELP--GHTHWTWAVCCNPEYDGFILSAGTDST 276 (346)
Q Consensus 206 ~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~--~~~~~v~~v~~~~~~~~~l~s~~~d~~ 276 (346)
+..+. |.++...+.+. .++..+..|.++.-.+..... -+..+. .-...+..+...... ..++..+.+|.
T Consensus 194 L~~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~-~~i~l~T~~G~ 271 (327)
T 3uc1_A 194 FNIDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDD-SELYAVTSGGG 271 (327)
T ss_dssp CCTTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEEEGGGC
T ss_pred CCCCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCC-ccEEEEcCCCe
Confidence 32223 55554444454 567777889998887654221 111121 112334443333333 44555566676
Q ss_pred EEEEecCC
Q 019059 277 VNLWLVST 284 (346)
Q Consensus 277 i~iwd~~~ 284 (346)
+.-++...
T Consensus 272 ~ir~~~~~ 279 (327)
T 3uc1_A 272 VIRTAARQ 279 (327)
T ss_dssp EEEEEGGG
T ss_pred EEEEehhh
Confidence 66666553
No 375
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=23.25 E-value=4.4e+02 Score=24.25 Aligned_cols=112 Identities=8% Similarity=-0.090 Sum_probs=56.0
Q ss_pred cceEEeeecCCCCceEEEEeecCCcceEEEEecCcccCCCCCccceeeeeeec----cCCceEEEEeecCCCCcEEEEec
Q 019059 66 NEIWDLSSCPFDQRIFSTVFSTGESYGAAIWQIPELYGQLNSPQLERIAALDA----HVGKINCVLWWSSGRHDKLVSID 141 (346)
Q Consensus 66 ~~v~~~~~~~~~~~l~~~~~~~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~ 141 (346)
+.|..|+++|.++.++.+. ...+.|..++-. ..+.+.+..... ....|.++++.|.....++++..
T Consensus 23 g~i~~i~~~p~~~~~~~~~---~~~ggv~rS~D~-------G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~ 92 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYAR---AAIGGAYRWDPS-------TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAG 92 (737)
T ss_dssp SCCCEEEECSSSTTCEEEE---CSSSCEEEEETT-------TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEEC
T ss_pred ceeeEEEECCCCCCEEEEE---ecCCcEEEeCCC-------CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEec
Confidence 3799999999865444442 333444333311 113333221111 12458999999865444555532
Q ss_pred C-------CeEEEEEcCCCCCCceeeecccC--C---CceeeEEEEeCCCC-CcEEEEe
Q 019059 142 E-------ENIFLWSLDCSNKNAQVQSKQSS--G---MLHYLSGGAWDPHD-VNAVAAT 187 (346)
Q Consensus 142 d-------~~i~vwd~~~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~-~~l~~~~ 187 (346)
. +...||.-..+....+....... + -...+..++++|.. ..++++.
T Consensus 93 ~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 93 MYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp SCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 1 13456665554444444332211 0 01124678888865 4555555
Done!