Your job contains 1 sequence.
>019060
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV
IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ
TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP
DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019060
(346 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 1639 1.5e-168 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 1627 2.9e-167 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 1616 4.2e-166 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 1215 1.3e-123 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 1078 4.3e-109 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 1062 2.1e-107 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 1062 2.1e-107 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 1062 2.1e-107 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 1062 2.1e-107 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 1062 2.1e-107 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 1062 2.1e-107 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 1060 3.5e-107 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 1057 7.2e-107 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 1046 1.1e-105 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 1019 1.2e-104 2
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 1035 1.6e-104 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 1021 4.7e-103 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 632 7.9e-62 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 549 4.9e-53 1
UNIPROTKB|C9JFU6 - symbol:UXS1 "UDP-glucuronic acid decar... 514 2.5e-49 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 512 4.1e-49 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 512 4.1e-49 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 393 1.7e-36 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 344 2.6e-31 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 336 1.8e-30 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 321 7.1e-29 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 317 1.9e-28 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 270 2.7e-27 2
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 303 5.7e-27 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 302 7.3e-27 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 299 1.5e-26 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 263 3.4e-26 2
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 290 1.4e-25 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 298 1.5e-25 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 289 1.8e-25 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 288 2.2e-25 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 296 2.5e-25 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 287 2.9e-25 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 286 3.6e-25 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 281 1.2e-24 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 280 1.6e-24 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 279 2.0e-24 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 284 5.1e-24 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 268 2.9e-23 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 267 3.8e-23 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 267 3.8e-23 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 267 3.8e-23 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 261 1.6e-22 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 260 2.1e-22 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 253 1.1e-21 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 256 1.4e-21 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 248 3.9e-21 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 246 6.3e-21 1
UNIPROTKB|C9J3T9 - symbol:UXS1 "UDP-glucuronic acid decar... 236 7.2e-20 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 248 3.1e-19 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 236 1.6e-18 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 233 1.9e-18 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 221 4.3e-18 2
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 230 4.8e-18 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 158 7.1e-18 2
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 157 7.5e-18 2
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 152 8.9e-18 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 228 2.3e-17 1
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 223 3.8e-17 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 223 3.8e-17 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 214 1.1e-16 2
TAIR|locus:2827733 - symbol:AT2G28755 "AT2G28755" species... 203 4.8e-16 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 218 5.4e-16 1
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 143 6.7e-16 2
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 198 6.7e-16 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 198 6.7e-16 2
UNIPROTKB|O53634 - symbol:gca "POSSIBLE GDP-MANNOSE 4,6-D... 214 6.9e-16 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 214 1.4e-15 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 214 1.5e-15 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 212 2.2e-15 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 211 2.9e-15 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 210 3.7e-15 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 163 1.5e-14 2
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 159 3.5e-14 2
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 159 3.5e-14 2
UNIPROTKB|Q6T1X6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 199 5.4e-14 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 201 6.6e-14 1
UNIPROTKB|Q13630 - symbol:TSTA3 "GDP-L-fucose synthase" s... 198 9.2e-14 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 199 1.0e-13 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 199 1.0e-13 1
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 199 1.0e-13 1
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 199 1.0e-13 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 198 1.3e-13 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 201 1.3e-13 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 150 1.7e-13 2
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 153 1.8e-13 2
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 197 2.0e-13 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 193 2.1e-13 2
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 199 2.2e-13 1
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 156 2.5e-13 2
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 194 2.6e-13 1
MGI|MGI:98857 - symbol:Tsta3 "tissue specific transplanta... 194 2.9e-13 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 193 4.2e-13 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 153 4.2e-13 3
UNIPROTKB|Q2KIT8 - symbol:TSTA3 "Tissue specific transpla... 192 5.1e-13 1
WARNING: Descriptions of 119 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
Identities = 308/345 (89%), Positives = 325/345 (94%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
MA SNG + +KPPP PSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct: 1 MASNSSNGT--TTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 58
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPL +EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 59 IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKT 118
Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGK
Sbjct: 119 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGK 178
Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQ
Sbjct: 179 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ 238
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
TRSFCYVSDMV+GL+RLMEG+ TGPINIGNPGEFTM+ELAE VKELI P+VEI MVENTP
Sbjct: 239 TRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTP 298
Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
DDPRQRKPDI+KA E+LGWEPK+KLR+GLPLME+DFRLRL VP+K
Sbjct: 299 DDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVPKK 343
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 304/342 (88%), Positives = 326/342 (95%)
Query: 5 ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
+++ + ++ KPPP+PSPLR SKF QSNMRIL++GGAGFIGSHLVDKLMENEKNEVIV D
Sbjct: 1 MASSDKQTSPKPPPSPSPLRNSKFCQSNMRILISGGAGFIGSHLVDKLMENEKNEVIVAD 60
Query: 65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
NYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct: 61 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120
Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
VIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAE
Sbjct: 121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAE 180
Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSF
Sbjct: 181 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSF 240
Query: 245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR 304
CYVSDMVDGL+RLMEG++TGPINIGNPGEFTM+ELAE VKELINP++EI MVENTPDDPR
Sbjct: 241 CYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPR 300
Query: 305 QRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
QRKPDITKA E+LGWEPK+KLR+GLPLME+DFRLRL V KN
Sbjct: 301 QRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRLGV-HKN 341
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 300/333 (90%), Positives = 320/333 (96%)
Query: 12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
+ +KPPP+PSPLR SKF Q NMRIL++GGAGFIGSHLVDKLMENEKNEV+V DNYFTGSK
Sbjct: 24 NTTKPPPSPSPLRNSKFCQPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK 83
Query: 72 DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
+NL+KWIGHPRFELIRHDVTEPLLIEVD+IYHLACPASPIFYKYNPVKTIKTNVIGTLNM
Sbjct: 84 ENLKKWIGHPRFELIRHDVTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 143
Query: 132 LGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 191
LGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAETLMFDYH
Sbjct: 144 LGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 203
Query: 192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSFCYVSDMV
Sbjct: 204 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263
Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT 311
DGLIRLMEG +TGPINIGNPGEFTM+ELAE VKELINP++EI MVENTPDDPRQRKPDI+
Sbjct: 264 DGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDIS 323
Query: 312 KATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
KA E+LGWEPK+KLR+GLPLME+DFRLRL VPR
Sbjct: 324 KAKEVLGWEPKVKLREGLPLMEEDFRLRLNVPR 356
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 227/311 (72%), Positives = 261/311 (83%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
+ +R++VTGGAGF+GSHLVD+LM + VIVVDN+FTG K+N+ +P FE+IRHD
Sbjct: 116 RKGLRVVVTGGAGFVGSHLVDRLMARG-DTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 174
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 175 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 234
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL DYHR +E+RIARIFNTYGP
Sbjct: 235 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGP 294
Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG 269
RM IDDGRVVSNF+AQA+R EPLTV G QTRSF +VSD+V+GL+RLMEGE+ GP N+G
Sbjct: 295 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 354
Query: 270 NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
NPGEFTMLELA+ V+E I+PN I NT DDP +RKPDITKA ELLGWEPK+ LR GL
Sbjct: 355 NPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGL 414
Query: 330 PLMEDDFRLRL 340
PLM DFR R+
Sbjct: 415 PLMVKDFRQRV 425
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 204/325 (62%), Positives = 248/325 (76%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 80 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 137
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 138 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 197
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 198 LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV PGTQTR+F YVSD+V+GL+ LM
Sbjct: 258 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSN 317
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K+L+ EI + DDP++RKPDI KA LLGWEP
Sbjct: 318 VSSPVNLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGWEP 377
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 378 VVPLEEGLNKAIHYFRKELEYQANN 402
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 202/325 (62%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RILVTGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILVTGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 377 VVPLEEGLNKAIHYFRKELEYQANN 401
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 201/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 260 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 319
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 320 VVPLEEGLNKAIHYFRKELEYQANN 344
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 201/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 377 VVPLEEGLNKAIHYFRKELEYQANN 401
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 201/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 377 VVPLEEGLNKAIHYFRKELEYQANN 401
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 201/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 377 VVPLEEGLNKAIHYFRKELEYQANN 401
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 201/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 377 VVPLEEGLNKAIHYFRKELEYQANN 401
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 200/325 (61%), Positives = 245/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 56 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 113
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 114 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 173
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNP+G R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 174 LLLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 233
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 234 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 293
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP
Sbjct: 294 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 353
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 354 VVPLEEGLNKAIHYFRKELEYQANN 378
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 200/325 (61%), Positives = 244/325 (75%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 73 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 130
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 131 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 190
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 191 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 251 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 310
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ EI + DDP++RKPDI KA +L WEP
Sbjct: 311 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLAWEP 370
Query: 322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
+ L +GL FR L N
Sbjct: 371 VVPLEEGLNKAIHYFRKELEYQANN 395
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 193/298 (64%), Positives = 242/298 (81%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
MRILVTGGAGFIGSHL ++L+E + ++V+ +DN+FTGSK N+ + + RFE+IRHD+ E
Sbjct: 1 MRILVTGGAGFIGSHLCERLLE-QGHDVLCLDNFFTGSKRNIDRLMDFHRFEVIRHDIIE 59
Query: 93 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
P+L+EVD+IY+LACPASP+ Y+YNPVKTIKT+V+GT+NMLGLAKRV ARIL STSEVYG
Sbjct: 60 PILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYG 119
Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
DP +HPQ ESYWGNVNPIG+RSCYDEGKRVAETL+ DYHRQ+G++IRIARIFNTYGPRM
Sbjct: 120 DPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRMA 179
Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNP 271
DGRVVSNF+ QA+RGE LTV G+QTRSFCYV D++DGL+ LME + GP+N+GNP
Sbjct: 180 EHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCGPVNLGNP 239
Query: 272 GEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
E ++E A + + + +I DDPRQR+PDIT A +LGWEP++ L +GL
Sbjct: 240 EETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVSLDEGL 297
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 1019 (363.8 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 196/328 (59%), Positives = 248/328 (75%)
Query: 19 TPSPLRFSKF----FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL 74
T +P ++ K +++ RIL+TGGAGF+GSHLVD LM + +EVIVVDN+FTG K N+
Sbjct: 98 TSTPRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMV-QGHEVIVVDNFFTGRKRNV 156
Query: 75 RKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
W+GH FELI HD+ PL IE+D+IYHLA PASP Y YNPVKTIKTN +GT+N+LGL
Sbjct: 157 EHWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGL 216
Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
AKRV A++L+ STSEVYGDP VHPQ E+YWG+VNPIG R+CYDEGKRV+ETL + Y +Q
Sbjct: 217 AKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQE 276
Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
+++R+ARIFNTYGPRM+++DGRVVSNFI QA+R E +TV G QTRSF YVSD+VDG+
Sbjct: 277 KVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGM 336
Query: 255 IRLMEGENTGPINIGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKA 313
I LM T P+N+GNP E T+ E AE +K+L+ P+V I + DDP++RKPDIT+A
Sbjct: 337 IALMASNYTQPVNLGNPVEQTIGEFAEIIKKLVGGPSV-IKQSKAMEDDPQRRKPDITRA 395
Query: 314 TELLGWEPKIKLRDGLPLMEDDFRLRLA 341
+LL WEPK+ L GL FR LA
Sbjct: 396 RQLLHWEPKVPLETGLQRTISYFRNELA 423
Score = 37 (18.1 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 14 SKPPPTPSPLRFS 26
+K PPT SPL+ S
Sbjct: 48 AKWPPTESPLQRS 60
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 194/308 (62%), Positives = 239/308 (77%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 77 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 134
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 135 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 194
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+LL STSEVYGDP VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct: 195 LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 254
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
RIFNT+G RM+++DGRVVSNFI QA++GE LTV G+QTR+F YVSD+V+GL+ LM
Sbjct: 255 RIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSN 314
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
+ P+N+GNP E T+LE A+ +K L+ I + DDP++R+PDI KA LLGWEP
Sbjct: 315 ISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEP 374
Query: 322 KIKLRDGL 329
+ L +GL
Sbjct: 375 VVPLEEGL 382
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 195/337 (57%), Positives = 252/337 (74%)
Query: 6 SNGNHNSASKPPPTPSP-LRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
+NG+ A P P +R+ ++ RIL+TGGAGF+GSHLVDKLM + +EVI +D
Sbjct: 110 ANGDEIVAPLPTTKSFPSVRYRNE-ETRKRILITGGAGFVGSHLVDKLML-DGHEVIALD 167
Query: 65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
NYFTG K N+ WIGHP FE++ HDV P +EVDQIYHLA PASP Y YNPVKTIKTN
Sbjct: 168 NYFTGRKKNVEHWIGHPNFEMVHHDVVNPYFVEVDQIYHLASPASPPHYMYNPVKTIKTN 227
Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
+GT+NMLGLAKRV A +LL STSEVYGDP VHPQ E+YWG+VN IG R+CYDEGKRVAE
Sbjct: 228 TLGTINMLGLAKRVKATVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAE 287
Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
+LM Y++Q I+IRIARIFNT+GPRM+++DGRVVSNFI QA++ +P+T+ GTQTRSF
Sbjct: 288 SLMVAYNKQENIKIRIARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQTRSF 347
Query: 245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNV-EITMVENTPDDP 303
YV+D+VDGLI+LM + P+NIGNP E T+ + A +++L+ + EI +E+ DDP
Sbjct: 348 QYVTDLVDGLIKLMNSNYSLPVNIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDP 407
Query: 304 RQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRL 340
+QR+PDI +A E + W P++ ++DGL D FR +
Sbjct: 408 QQRRPDIRRAAEQISWAPQVHMKDGLLKTVDYFRAEI 444
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 120/169 (71%), Positives = 136/169 (80%)
Query: 22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
P++F + RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH
Sbjct: 22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79
Query: 82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct: 80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y
Sbjct: 140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 99/133 (74%), Positives = 118/133 (88%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS 174
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV 234
CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
Query: 235 QAPGTQTRSFCYV 247
G+QTR+F YV
Sbjct: 122 YGSGSQTRAFQYV 134
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 92/120 (76%), Positives = 109/120 (90%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS 174
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA 61
Query: 175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV 234
CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV
Sbjct: 62 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTV 121
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 92/135 (68%), Positives = 115/135 (85%)
Query: 134 LAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
LAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 254 LIRLMEGENTGPINI 268
L+ LM + P+N+
Sbjct: 153 LVALMNSNVSSPVNL 167
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 92/135 (68%), Positives = 115/135 (85%)
Query: 134 LAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
LAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q
Sbjct: 33 LAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 92
Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+G
Sbjct: 93 EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNG 152
Query: 254 LIRLMEGENTGPINI 268
L+ LM + P+N+
Sbjct: 153 LVALMNSNVSSPVNL 167
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 112/312 (35%), Positives = 169/312 (54%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGH-PRFELIRHD 89
+ L+TGGAGFIGSHL ++L+ N V +VDN++ G D L K I P L ++
Sbjct: 4 KCLITGGAGFIGSHLAEELVGRGYN-VTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNS 62
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
+ E L+ + D ++HLA ++ I+TN GT N+L A + +++ STSE
Sbjct: 63 IYE-LVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFASTSE 121
Query: 150 VYGD--PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
VYG P + + +G + I R Y K + ETL Y + G+ + I R FN Y
Sbjct: 122 VYGKAKPPFSEEGDRLYGATSKI--RWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIY 178
Query: 208 GPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
GPR DG V+ FI+ A++GE + V G QTR F YVSD V+ IR M+ + G
Sbjct: 179 GPRAK--DGPYAGVIPRFISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDEKVNG 236
Query: 265 PI-NIGNPGEFTMLELAENVKELINPNVEITMV---ENTP---DDPRQRKPDITKATELL 317
I NIG+ E ++ E+AE +K+L + + +I V E P ++ R+PD+TK +L+
Sbjct: 237 EIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296
Query: 318 GWEPKIKLRDGL 329
++ K+ DGL
Sbjct: 297 QFQAKVTWEDGL 308
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 88/307 (28%), Positives = 150/307 (48%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI------- 86
+ +V GGAG IGSH VD+L++ + EVI+ DN+ G+++NL + + PR ++
Sbjct: 8 KFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67
Query: 87 RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
+ D+ L VD ++H A Y+Y P +TN+ GT N+L G R++ +
Sbjct: 68 QTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFS 126
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
S++ VYGD L P E++ P R+ Y K E + YH ++G+ R N
Sbjct: 127 SSASVYGDALEEPMTEAH-----PFNSRTFYGATKIAGEAMATAYHHRYGLPFVGLRYMN 181
Query: 206 TYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
YGPR + V+ + +G+P+T+ G+Q F YV D I M+ +
Sbjct: 182 VYGPRQDYRGAYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMKADTV 241
Query: 264 GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
N+G ++LELA+ ++++ + I + + R KA E +G++ +
Sbjct: 242 DEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIGFKAE 301
Query: 323 IKLRDGL 329
+ L +GL
Sbjct: 302 VGLTEGL 308
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 100/308 (32%), Positives = 143/308 (46%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE--- 92
+VTGGAGFIGSH+VD L++ +V V+DN G + NL +P D+ E
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGF-QVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSA 65
Query: 93 --PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTSE 149
PL VD ++H A + NP+ ++TNV+GT+ +L A+ + L+ ++S
Sbjct: 66 PHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSS 125
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
YG V P E + PI + Y K + E F + + +G+ + RIFN YG
Sbjct: 126 CYGLADV-PTREDH-----PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGT 179
Query: 210 RMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP-- 265
R+ G V F Q + +P TV GTQ R F YV+D+ ++ E G
Sbjct: 180 RVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVGETW 239
Query: 266 -INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIK 324
+ GNP L ELI VE + P +P DI+K LGWEP I
Sbjct: 240 NLGAGNPQSINRLV------ELIGGEVEY--IPKRPGEPDCTWADISKIKRDLGWEPTIT 291
Query: 325 LRDGLPLM 332
DG+ M
Sbjct: 292 FADGVSRM 299
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 97/313 (30%), Positives = 145/313 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
M+ILVTGGAGFIGSH V L+ + +V VVD + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 86 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
G R L ST EVYG D W +P+ S Y K ++ L YH+ HG+++
Sbjct: 121 G-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
+ R N YGPR + +++ F+ + + G + V G R + +VSD GL +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232
Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKATEL 316
G + +IG E T LEL E + E P I+ V + R+ D +K
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGE 292
Query: 317 LGWEPKIKLRDGL 329
LG+ P++ DG+
Sbjct: 293 LGYRPRVDFTDGI 305
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 94/312 (30%), Positives = 148/312 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+LVTGGAGFIGSHL+ L + +I VDN + + NLR + I DV +
Sbjct: 9 VLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVCD 68
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
PL I+ +D ++H A P + ++ NV GT ++ + R +
Sbjct: 69 PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
ST EVYGD + P DE ++P + Y K AE+++ Y +H I R
Sbjct: 129 ISTDEVYGDSVDQPFDE-----LSPKRPTNPYSRSKAAAESIVTSYWLKHKFPAVITRSS 183
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
N YGPR + + +V+ F++ + + T+Q G Q+R F YVSD+ D + +ME G
Sbjct: 184 NVYGPRQHHE--KVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGILG 241
Query: 265 PI-NIGNPGEFTMLELAENVKELINPNVEITMVEN----TPDDP--RQRKPDITKATELL 317
I NIG E +++LA + ++ +V +++ D P R P + L
Sbjct: 242 EIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMNSVKLHRL 301
Query: 318 GWEPKIKLRDGL 329
GW PK+ +G+
Sbjct: 302 GWRPKVAWTEGI 313
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 270 (100.1 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 79/268 (29%), Positives = 132/268 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWGN--VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG DE + N V P+ R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCSDKYFDEDH-SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 491
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 551
Query: 259 EGENT---GPI-NIGNP-GEFTMLELAE 281
E G I NIGNP E ++ EL E
Sbjct: 552 ENAGNRCDGEIINIGNPENEASIEELGE 579
Score = 69 (29.3 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 266 INIGNP-GEFTMLELAENV-----KELIN----PNVEITMVENTP------DDPRQRKPD 309
INIGNP E ++ EL E + K + P +VE++ D RKP
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622
Query: 310 ITKATELLGWEPKIKLRDGLPLMEDDF 336
I A L WEPKI +++ + D F
Sbjct: 623 IRNAHRCLDWEPKIDMQETIDETLDFF 649
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 97/309 (31%), Positives = 147/309 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
ILVTG GFIGSHL + L++ K + N F +L K E++ D+ +
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFN-FWGHLEKSPFLKDMEVVSGDLRDS 62
Query: 94 LLIE-----VDQIYHL-ACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
E +D I+HL A A P Y Y P + TNV GTLNML AK+ + + T
Sbjct: 63 FFCEKITKNIDAIFHLGALIAIP--YSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHT 120
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
STSEVYG P DE + P+ +S Y K A+ + Y+ + + IAR FN
Sbjct: 121 STSEVYGTAFYVPIDEKH-----PLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFN 175
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
TYGPR + ++ I Q + G + R +V D +G I L+ ++ G
Sbjct: 176 TYGPRQSAR--AIIPTIITQILSGAKEIKLGDLSPKRDLNFVLDTCEGFISLLNLKHFGE 233
Query: 266 I-NIGNPGEFTMLELAENVKELINPNVEITMVENT--PDDPRQRKP--DITKATELLGWE 320
+ NIG+ E++M E+ ++++++ V+I E P + + D K + W+
Sbjct: 234 VYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKLKKATNWQ 293
Query: 321 PKIKLRDGL 329
KI L +GL
Sbjct: 294 SKISLEEGL 302
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 96/315 (30%), Positives = 145/315 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD-VT 91
MR LVTG AGFIGS LVD+L+ + + V+ +DN+ TG NL + + D VT
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLA-DGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVT 59
Query: 92 EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 145
L ++Q ++HLA +P NVIGT+ + A++ G R I+ T
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHT 119
Query: 146 STS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
S+ +YG P +P E+ P S Y GK E + + +G++
Sbjct: 120 SSGGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 205 NTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
N YGPR + + VV+ F + G+P V GT TR + +V D+VD +R+
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRVSADVGG 234
Query: 264 G-PINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
G NIG E + +L V + + D ++ DI A +LGW P+
Sbjct: 235 GLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQ 294
Query: 323 IKLRDGLPLMEDDFR 337
I+L DG+ + FR
Sbjct: 295 IELADGVRRTVEYFR 309
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 93/306 (30%), Positives = 140/306 (45%)
Query: 35 ILVTGGAGFIGSHLVDKLM-ENEKNEVIV--VDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
+LVTG AGFIGS V L+ +V+V +D + G+ DNL GHPR+ R D+
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 91 TE-P---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
+ P ++ DQ+ HLA + + ++TNV GT +L A R G A +
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYG L H W P+ S Y K + L +H HG+++R+ R N
Sbjct: 125 STDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
YGPR + +++ FI + G + + G R + +V D V G+ + G
Sbjct: 180 NYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR 237
Query: 266 I-NIGNPGEFTMLELAENVKELINPNV-EITMVENTPDDPRQRKPDITKATELLGWEPKI 323
+ NIG + EL + E + + VE+ R+ D T+ LG+ P +
Sbjct: 238 VYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAV 297
Query: 324 KLRDGL 329
L DGL
Sbjct: 298 DLADGL 303
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 263 (97.6 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 79/270 (29%), Positives = 136/270 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ ++K +V +D GS D + + HP F + D++
Sbjct: 320 RVLILGVNGFIGNHLSERLLRDDKYDVYGLD---IGS-DAIERLRSHPNFHFVEGDISIH 375
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + R++ ST
Sbjct: 376 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPST 435
Query: 148 SEVYGDPLVHPQDESYWGN--VNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG DE N V PI R Y K++ + +++ Y + G+ + R F
Sbjct: 436 SEVYGMCQDKNFDEDT-SNLIVGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPF 493
Query: 205 NTYGPRMN-IDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ +D R+ ++ I + G P+ + G Q R F ++D ++ L R++
Sbjct: 494 NWMGPRLDRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIV 553
Query: 259 EGEN---TGPI-NIGNP-GEFTMLELAENV 283
+ EN G I NIGNP E ++ +L E +
Sbjct: 554 DNENDCCNGQIINIGNPDNEASIRQLGEEL 583
Score = 66 (28.3 bits), Expect = 3.4e-26, Sum P(2) = 3.4e-26
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 302 DPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV 342
D RKP I A LL WEP +++ + + D F LR A+
Sbjct: 617 DVEHRKPSIDNAKRLLNWEPTVEMSETIGNTLDFF-LREAM 656
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 91/313 (29%), Positives = 144/313 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
R+LVTGGAGFI SH++ L+E+ N +I+ +D + S NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 92 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
ST EVYG L DES +P + Y K AE + Y Q+ + I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 264 GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPD--DPR----QRKPDITKATEL 316
G I NIG E ++L+LA+ + +LI + +EN D D R R P ++
Sbjct: 252 GEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHG 311
Query: 317 LGWEPKIKLRDGL 329
LGW PK+ ++G+
Sbjct: 312 LGWRPKVPWKEGI 324
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 298 (110.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 93/311 (29%), Positives = 151/311 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ + + +++V+D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 93 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI E+D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 144 LTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
ST EVYG+ +D S GN + + + Y K AE L+ Y R +G+ +
Sbjct: 129 HVSTDEVYGET---DEDASV-GNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEG 260
R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +G
Sbjct: 185 RGNNVYGP--NQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 261 ENTGPINIGNPGEFTMLELAENVKEL--INPNVEITMVENTPDDPRQRKPDITKATELLG 318
E NIG E ++++A ++ +L I+P+ I VEN P + ++ D K +L G
Sbjct: 243 EVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKL-G 301
Query: 319 WEPKIKLRDGL 329
W + +GL
Sbjct: 302 WCERTNWEEGL 312
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 98/344 (28%), Positives = 156/344 (45%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
+SA + P P F+K R+LVTGGAGFI SH++ L+E+ N +I+ +D +
Sbjct: 2 SSAGRAEPLGPPSSFAK------RLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEP----LLIE---VDQIYHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ LL E +D + H A +
Sbjct: 56 ASLKNLETISNKQNYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
NV GT ++ A + + ST EVYG L DES +P + Y K
Sbjct: 116 YVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSK 170
Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
AE + Y ++ I R N YGP + +V+ FI+ + G Q
Sbjct: 171 AAAECFVQSYWERYKFPAVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQ 228
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELI---NPNVEI-TM 295
TR+F Y +D+V+ + +++ G I NIG E ++L+LA+ + +LI + E+ T
Sbjct: 229 TRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETW 288
Query: 296 VENTPDDPRQ--RKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
V+ D P R P ++ + LGW PK+ ++G+ D +R
Sbjct: 289 VDYVNDRPTNDMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYR 332
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 90/315 (28%), Positives = 148/315 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+ILVTGGAGFIGS V K + +E+I+VD T + D R R + + DV +
Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYD--HELIIVDK-LTYAGDLRRIEEVRDRIKFYKADVAD 57
Query: 93 PLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
IE + + H A + +P I+TNV GT ML +++ G + +
Sbjct: 58 KTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFVH 117
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
ST EVYG+ E + +P+ S Y K A+ L YHR +G+ + +AR
Sbjct: 118 ISTDEVYGEL----GKEGQFTEESPLRPNSPYSVSKAAADMLARAYHRTYGLPVIVARPC 173
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
N YGP + +++ I +A+ EP+ V G R + YV D ++ + L++ G
Sbjct: 174 NNYGPWQYPE--KLIPVVIKKALNNEPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKPG 231
Query: 265 PI-NIGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
NIG+ E +E+ + + ++ P IT VE+ P + + K W+ K
Sbjct: 232 EAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRYSLNSKKIKMNYAWKHK 291
Query: 323 IKLRDGLPLMEDDFR 337
+ +G+ + D ++
Sbjct: 292 VNFNEGIRFVIDWYK 306
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 296 (109.3 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 90/311 (28%), Positives = 148/311 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ N + +++V+D + NL P F+ ++ D+
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 93 P-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 130
Query: 144 LTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
ST EVYG+ +++ GN + + + Y K AE L+ Y R +G+ +
Sbjct: 131 HVSTDEVYGET----DEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEG 260
R N YGP N +++ FI A+ G+PL + G+ RS+ Y D+ + + L +G
Sbjct: 187 RGNNVYGP--NQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG 244
Query: 261 ENTGPINIGNPGEFTMLELAENVKELI--NPNVEITMVENTPDDPRQRKPDITKATELLG 318
E N+G E ++++A ++ +L +P I VEN P + ++ D K +L G
Sbjct: 245 EIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKL-G 303
Query: 319 WEPKIKLRDGL 329
W+ + DGL
Sbjct: 304 WQERTNWEDGL 314
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 96/335 (28%), Positives = 151/335 (45%)
Query: 12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTG 69
+A + P P F+K R+LVTGGAGFI SH++ L+E+ N +IV +D +
Sbjct: 3 TAVRAEPLGPPNSFAK------RVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCA 56
Query: 70 SKDNLRKWIGHPRFELIRHDVTEP----LLIE---VDQIYHLACPASPIFYKYNPVKTIK 122
S NL ++ I+ D+ + LL E +D + H A +
Sbjct: 57 SLKNLETISDKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTY 116
Query: 123 TNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR 181
NV GT +L A + + ST EVYG L DES +P + Y K
Sbjct: 117 VNVYGTHVLLSAAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKA 171
Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
AE + Y ++ + I R N YGP + +V+ FI+ + G QT
Sbjct: 172 AAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQT 229
Query: 242 RSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVEITMVEN-- 298
R+F Y +D+V+ + +++ G I NIG E ++L+LA+ + +LI + +EN
Sbjct: 230 RNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWV 289
Query: 299 --TPDDPRQ--RKPDITKATELLGWEPKIKLRDGL 329
D P R P ++ LGW PK+ ++G+
Sbjct: 290 DYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGI 324
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 91/313 (29%), Positives = 144/313 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
R+LVTGGAGFI SH++ L+E+ N +I+ +D + S NL ++ I+ D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDIC 78
Query: 92 EP----LLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ LL E +D + H A + NV GT ++ A + +
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKFI 138
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
ST EVYG L DES +P + Y K AE + Y Q+ + I R
Sbjct: 139 YVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRS 193
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
N YGP + +V+ FI+ + G QTR+F Y +D+V+ + +++
Sbjct: 194 SNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP 251
Query: 264 GPI-NIGNPGEFTMLELAENVKELINP-NVEITM---VENTPDDPRQ--RKPDITKATEL 316
G I NIG E ++++LA+ + +LI N E M V+ D P R P ++
Sbjct: 252 GEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHG 311
Query: 317 LGWEPKIKLRDGL 329
LGW PK+ ++G+
Sbjct: 312 LGWRPKVPWKEGI 324
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 92/333 (27%), Positives = 149/333 (44%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FTGSK 71
S PP RF K R+LVTGGAGFI SH+V L+ N N +I+ +D + S
Sbjct: 10 SGPPVREEVPRFEK------RLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASL 63
Query: 72 DNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTN 124
NL ++ I+ D+ EP I+ +D + H A ++ ++ N
Sbjct: 64 KNLETVSEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVN 123
Query: 125 VIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA 183
V GT ++ A + + ST EVYG DES +P + Y K A
Sbjct: 124 VYGTNVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDES-----SPKCPTNPYASSKAAA 178
Query: 184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 243
E + Y ++ + I R N YGP + +V+ FI+ + + G Q R+
Sbjct: 179 ECFVQSYWERYQFPVVITRSSNVYGPHQYPE--KVIPKFISLLQQNRKCCIHGSGLQRRN 236
Query: 244 FCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVEITMVEN---- 298
F Y +D+V+ + +++ G I NIG E ++++LA+ + LI + +E+
Sbjct: 237 FLYATDVVEAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDY 296
Query: 299 TPDDPRQ--RKPDITKATELLGWEPKIKLRDGL 329
D P R P ++ LGW PK+ ++G+
Sbjct: 297 VKDRPTNDLRYPMSSEKMHNLGWRPKVPWKEGI 329
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 95/336 (28%), Positives = 154/336 (45%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
++AS+ + P F+K R+LVTGGAGFI SH++ L+E+ + +IV +D +
Sbjct: 2 SAASREERSGPPGSFAK------RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEP----LLIEVDQI---YHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ + LL EV++I H A +
Sbjct: 56 ASLKNLEPVSNKQNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
NV GT ++ A G + + ST EVYG L DES +P + Y K
Sbjct: 116 YVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSK 170
Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
AE + Y ++ + I R N YGP + +V+ FI+ + G Q
Sbjct: 171 AAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQ 228
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELI---NPNVEI-TM 295
R+F Y +D+V+ + ++ G I NIG E ++++LA+ + +LI N E +
Sbjct: 229 RRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESW 288
Query: 296 VENTPDDPRQ--RKPDITKATELLGWEPKIKLRDGL 329
V+ D P R P ++ LGW+PK+ +G+
Sbjct: 289 VDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGI 324
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 103/316 (32%), Positives = 145/316 (45%)
Query: 34 RILVTGGAGFIGSHLVDKL-MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH---- 88
+ILVTG GFIGSHL + L M V N F N W+ H EL++
Sbjct: 7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSF-----NSWGWLDHLDPELLKSLDVF 61
Query: 89 --DVTEPLLIE-----VDQIYHLACP-ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
D+ +P + D + HLA A P Y ++P + TNV GTLN++ A+ +G
Sbjct: 62 AGDIRDPHGVREAMKGCDVVLHLAALIAIPYSY-HSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
A+++ TSTSEVYG P E + P+ +S Y K A+ + ++ +
Sbjct: 121 AKVVHTSTSEVYGTARFVPITEEH-----PLQGQSPYSASKIGADQIAMSFYSSFDTPVA 175
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
I R FNTYGPR + + I Q G TR YV+D V G I + E
Sbjct: 176 IIRPFNTYGPRQSAR--AFIPTVITQIASGARTLRLGALHPTRDLNYVADTVAGFIAVAE 233
Query: 260 GENT-GP-INIGNPGEFTMLELAENVKELINPNVEI-TMVENT-PDDPRQRK--PDITKA 313
E + G INIG+ E +M E A + +++ +VEI T E PD + D +KA
Sbjct: 234 SEKSVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWADTSKA 293
Query: 314 TELLGWEPKIKLRDGL 329
LL +DGL
Sbjct: 294 KRLLDHGQNYGGKDGL 309
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 93/313 (29%), Positives = 146/313 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
IL+TG AGFI SH+ ++L+ + + +++V+D + + NL P F+ ++ D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 93 P-----LLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RIL 143
LLI +D I H A N + K N+ GT +L K G R +
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI 128
Query: 144 LTSTSEVYG----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
ST EVYG D LV + S NP Y K AE L+ Y R +G+ +
Sbjct: 129 HVSTDEVYGETDEDALVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPVI 182
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLM 258
R N YGP N +++ FI A+RG+ L + G+ RS+ Y D+ + + L
Sbjct: 183 TTRGNNVYGP--NQFPEKLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 259 EGENTGPINIGNPGEFTMLELAENVKELIN--PNVEITMVENTPDDPRQRKPDITKATEL 316
+GE NIG E + ++A+++ +L N P I V+N P + ++ D K +L
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKL 300
Query: 317 LGWEPKIKLRDGL 329
GW + +GL
Sbjct: 301 -GWSERTTWEEGL 312
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 80/309 (25%), Positives = 141/309 (45%)
Query: 33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
M ILVTGGAGFIGS+ V ++++ E ++I D ++G+ +N++ HP + ++ ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60
Query: 91 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARI 142
L+E V I + A + NP+ TNVIGT+ +L L K+ ++
Sbjct: 61 QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKL 120
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
+ ST EVYG + P+ S Y K A+ + Y++ + + + + R
Sbjct: 121 VQVSTDEVYGSL----GKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTR 176
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
N YGP + +++ + A+ G+ L + G R + +V+D + ++
Sbjct: 177 CSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR 234
Query: 263 TGPI-NIGNPGEFTMLELAENVKELINPNV-EITMVENTPDDPRQRKPDITKATELLGWE 320
G + NIG E T +E+ E + L+ +I V + R+ + K WE
Sbjct: 235 VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWE 294
Query: 321 PKIKLRDGL 329
PK GL
Sbjct: 295 PKYTFEQGL 303
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 93/319 (29%), Positives = 149/319 (46%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
L+TG AGFIGS+L+++L++ + VI +DN+ TG + NL +W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 87 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
++S YGD P+ E GN P+ S Y K V E Y R +G E
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 201 ARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R FN +G R + + V+ + + I+GE + + G +R FCY+ ++V I
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELINPN-VEITMVENTPD----DPRQRKPDI 310
+ + N G+ T L +L +K+ +N N + + N D D R + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 311 TKATELLGWEPKIKLRDGL 329
+KA LG++ K+ +G+
Sbjct: 310 SKAVTRLGYQYTHKILEGI 328
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 93/319 (29%), Positives = 149/319 (46%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
L+TG AGFIGS+L+++L++ + VI +DN+ TG + NL +W+ RF I
Sbjct: 19 LITGVAGFIGSNLLEQLLKLNQT-VIGLDNFATGRQHNLDEVQSLVTSEQWM---RFSFI 74
Query: 87 RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + + E VD + H A S +P+ T N+ G LNML AK +
Sbjct: 75 NGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
++S YGD P+ E GN P+ S Y K V E Y R +G E
Sbjct: 135 SFTYAASSSTYGDHPALPKVEQNIGN--PL---SPYAVTKYVNELYASVYARTYGFETIG 189
Query: 201 ARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R FN +G R + + V+ + + I+GE + + G +R FCY+ ++V I
Sbjct: 190 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNILAA 249
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELINPN-VEITMVENTPD----DPRQRKPDI 310
+ + N G+ T L +L +K+ +N N + + N D D R + D+
Sbjct: 250 TAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADV 309
Query: 311 TKATELLGWEPKIKLRDGL 329
+KA LG++ K+ +G+
Sbjct: 310 SKAVTRLGYQYTHKILEGI 328
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 90/336 (26%), Positives = 151/336 (44%)
Query: 11 NSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNY-FT 68
++AS+ + P F+K R+LVTGGAGFI SH++ L+E+ N +I+ +D +
Sbjct: 2 SAASREERSGPPGSFAK------RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYC 55
Query: 69 GSKDNLRKWIGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTI 121
S NL ++ I+ D+ + ++ +D + H A +
Sbjct: 56 ASLKNLEPVSNKQNYKFIQGDICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFT 115
Query: 122 KTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
NV GT ++ A + + ST EVYG L DES +P + Y K
Sbjct: 116 YVNVYGTHVLVNTAYEARVEKFIYVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSK 170
Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
AE + Y ++ + I R N YGP + +V+ FI+ + G Q
Sbjct: 171 AAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHDRKCCIHGSGLQ 228
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELI---NPNVEITM- 295
R+F Y +D+V+ + ++ G I NIG E ++++LA+ + +LI N + E
Sbjct: 229 RRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERW 288
Query: 296 VENTPDDPRQ--RKPDITKATELLGWEPKIKLRDGL 329
V+ D P R P ++ LGW+PK+ +G+
Sbjct: 289 VDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGI 324
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 92/302 (30%), Positives = 154/302 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
+LVTGG GFIGSHLVD L+ ++ +V V+DN GS +NL K + E+I ++T+
Sbjct: 4 VLVTGGCGFIGSHLVDALL-SQGFKVRVMDNLSNGSLENL-KCGQRDKLEIINGNLTDKF 61
Query: 95 LIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
L++ + ++HLA A+ + ++ N + T N+L +R R++ S++
Sbjct: 62 LLDSAVKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
VYG+ + DE Y G + PI S Y K E L+ Y +G++ + R N G
Sbjct: 122 AVYGESGLTVLDEDY-GPLLPI---SLYGASKLAGEGLISAYSHLYGLKATMFRFANIVG 177
Query: 209 PRMNIDDGRVVSNFIAQAIRGEP--LTVQAPGTQTRSFCYVSDMVDGLIRLMEG--ENTG 264
R + G V+ +F+++ +R P L V G+Q++ + +VSD V G++ E +N G
Sbjct: 178 SRRH--SG-VIYDFVSR-LRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNLG 233
Query: 265 PINIGNPGEFTMLELAENV-KELINPNVEITMV---ENTPDDPRQRKPDITKATELLGWE 320
N+G P + ++A V E+ NV + D Q + DI++ LG++
Sbjct: 234 LYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRI-RTLGFK 292
Query: 321 PK 322
PK
Sbjct: 293 PK 294
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 92/333 (27%), Positives = 152/333 (45%)
Query: 8 GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
G N T L +++ S N++I +TG GFI SH+ +L ++E + VI D
Sbjct: 2 GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 58
Query: 67 FTGSKDNLRKWIGHPRFELIRHDVTEPLL--IE-VDQIYHLACPASPI-FYKYNPVKTIK 122
+++ + + F L+ V E L E VD +++LA + F + N +
Sbjct: 59 -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 117
Query: 123 TNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYW-GNVNPIGVRSCYDEG 179
N + + NM+ A+ G R S++ +Y + + + S + P + Y
Sbjct: 118 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLE 177
Query: 180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRG-EPLTVQA 236
K E L Y++ GIE RI R N YGP GR + F +A + +
Sbjct: 178 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWG 237
Query: 237 PGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMV 296
G QTRSF ++ + V+G++RL + + P+NIG+ +M E+AE V + I +
Sbjct: 238 DGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHI 297
Query: 297 ENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
P+ R R D E LGW P ++L++GL
Sbjct: 298 PG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGL 329
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 98/336 (29%), Positives = 153/336 (45%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY----FTGSKDNLRKWIGH-PRFELIRHD 89
+L+TGG GFIGS+ ++ KN + NY F S ++ K I PR++ +
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFI--NYDKLAFGASPLHVEKEIRESPRYKFVEAA 68
Query: 90 VTE-PLLI------EVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGL---AKRV 138
+ + P LI EVD + H A + + Y+ + TI+ N+I T +L +
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAA-ITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYK 127
Query: 139 GARILL-TSTSEVYGDPL--VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
G + L+ ST EVYGD P+ ES NP Y K E ++ Y +
Sbjct: 128 GVKKLVHISTDEVYGDSFEDTTPKSESA-SLPNPTNP---YAASKAACEMVIRSYWHSYK 183
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ + R+ N YGPR I +++ F A+ G+P + G TRS+ YV D + +
Sbjct: 184 LPYVMVRMNNVYGPRQ-IHT-KLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAIT 241
Query: 256 RL-MEGENTGPI-NIGNPGEFTMLELAE----NVKELINPNVEITMVENTPDDP---RQR 306
R+ +EG G I NIG E T +EL + V +L+N PD P R+
Sbjct: 242 RVALEG-TLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRY 300
Query: 307 KPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV 342
D +K +GW+ +GL + D+ ++L V
Sbjct: 301 YIDFSKIRNAMGWQCTTPFSEGL-MKTIDYYVKLHV 335
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 256 (95.2 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 78/283 (27%), Positives = 136/283 (48%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
+IL+TGGAGFIGSHL L + KN ++IV+D + + +NL + F+ + ++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-IL 143
+ L+E +D + HLA +K + N++GT +L K + +
Sbjct: 71 DSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFI 130
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNP-------IGVRSCYDEGKRVAETLMFDYHRQHGI 196
ST EVYG L+ D++ ++N + + Y K AE L+ Y++ +
Sbjct: 131 YVSTDEVYGSGLIEDNDDNN-NSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSFKL 189
Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-I 255
+ I R N YGP+ + +++ FI + + T+ G TR++ Y+ D+V I
Sbjct: 190 PVIITRANNIYGPKQYPE--KIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDI 247
Query: 256 RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
L +GE NIG E + L++A K++IN ++ + N
Sbjct: 248 ILRKGEIGNVYNIGTDFEISNLDVA---KKIINISINLNNNNN 287
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 86/316 (27%), Positives = 140/316 (44%)
Query: 33 MRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V + E+ + V V+D + G +++L L++ D+
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADV--EDAIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A + NP + TNVIGT +L +R G R+
Sbjct: 59 TDAELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHI 118
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + D + + P S Y K A+ L+ + R +G+ I+ N
Sbjct: 119 STDEVYGD--LELDDRARFTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSN 176
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
YGP +++ + + I + G + G R + +V D + R+++ G
Sbjct: 177 NYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGR 234
Query: 266 IN-IGNPGEFTMLELAENVKELIN--PNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
I + GE L + + L++ P+ + + D R T EL W PK
Sbjct: 235 TYLISSEGERDNLTVLRTLLRLMDRDPDDFDHVTDRVGHDLRYAIDPSTLYDELC-WAPK 293
Query: 323 -IKLRDGLPLMEDDFR 337
+GL D +R
Sbjct: 294 HTDFEEGLRTTIDWYR 309
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 80/300 (26%), Positives = 133/300 (44%)
Query: 33 MRILVTGGAGFIGSHLVD-KLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
MR+LVTGGAGFIG++ V L E + + V+D + GS+++L R L++ D+
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALTYAGSRESLAPVAD--RIRLVQGDI 58
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T+ L+ E D + H A +P + +NV+GT +L +R R+
Sbjct: 59 TDAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + + + + P S Y K A+ L+ + R +G+ I+ N
Sbjct: 119 STDEVYGD--LELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSN 176
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
YGP +++ + + I + G + G R + +V D + R++ G
Sbjct: 177 NYGPYQHVE--KFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGR 234
Query: 266 IN-IGNPGEFTMLELAENVKELI--NPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
IG E L + + +L+ +P+ + + D R T EL GW PK
Sbjct: 235 TYLIGAECERNNLTVMRTILKLMGRDPDDFDHVTDRAGHDLRYAIDPSTLQDEL-GWAPK 293
>UNIPROTKB|C9J3T9 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00915766 ProteinModelPortal:C9J3T9 SMR:C9J3T9 STRING:C9J3T9
Ensembl:ENST00000436241 ArrayExpress:C9J3T9 Bgee:C9J3T9
Uniprot:C9J3T9
Length = 52
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG 165
YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG
Sbjct: 2 YNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWG 52
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 248 (92.4 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 90/318 (28%), Positives = 145/318 (45%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK-DNLRKWIGH-PRFELIRHDVT 91
+++TGG GFIGS+ V+ + + + +D S N+ + + + PR++L+ D+
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 142
I E+D + H A + + ++ NV+ + L + G R
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIKRF 127
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNV--NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
+ ST EVYGD + ++ G V + + + Y K E + Y Q+ + I
Sbjct: 128 VHISTDEVYGDSDLSENEQ---GKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQA-IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
AR+ N YGP N D +VV FI A +RGE T+Q G Q RS+ +V D GL + E
Sbjct: 185 ARMNNIYGP--NQWDVKVVPRFIEIAKVRGE-YTIQGSGKQLRSWLFVDDASAGLKAVCE 241
Query: 260 -GENTGPINIGNPGEFTMLELAENVKELINPNV----EITMVENTPDDPRQRKP---DIT 311
GE N+G E + +LA+ ++E ++ + E ++ PD P I
Sbjct: 242 KGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLISIE 301
Query: 312 KATELLGWEPKIKLRDGL 329
KA LGWEP DG+
Sbjct: 302 KAKNDLGWEPTTSFDDGM 319
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 236 (88.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 88/315 (27%), Positives = 140/315 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
I+VTGGAGFIGS+ V + N + V V+D + G++ NL + +G R EL+ D+ +
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGD-RVELVVGDIAD 65
Query: 93 PLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
L++ D I H A + +P I TN +GT +L A++ R ST
Sbjct: 66 SELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHHVST 125
Query: 148 SEVYGD-PLV-----HPQD--ESYWGNV--NPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
EVYGD PL H + E + NP S Y K ++ ++ + R G++
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETKYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
I+ N YGP +I+ + + I + G + G R + + +D G+ +
Sbjct: 183 ATISNCSNNYGPYQHIE--KFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240
Query: 258 MEGENTGPIN-IGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKATE 315
+ G IG GE E+ E + E ++ P V + + D TK E
Sbjct: 241 LTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAIDSTKLRE 300
Query: 316 LLGWEPKI-KLRDGL 329
LGW+P+ +GL
Sbjct: 301 ELGWKPQFTNFEEGL 315
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 233 (87.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 89/311 (28%), Positives = 136/311 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFELIRHDV 90
IL+ GGAG+IGSH V KL++ E V+VVDN TG +D + + + G R + DV
Sbjct: 4 ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV 62
Query: 91 TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
IE + H A + P++ NV G L +L + + + +ST+
Sbjct: 63 FTQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
YG+ V E NP Y E K E ++ Y + + +I R FN G
Sbjct: 121 TYGEVDVDLITEETM--TNPTNT---YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGA 175
Query: 210 RMN-I--DDGRVVSNFIA---QAIRGEPLTVQ-------AP-GTQTRSFCYVSDMVD--- 252
N I +D R ++ I Q G+ + P GT R + +V D+V
Sbjct: 176 TPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF 235
Query: 253 -GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT 311
GL L G + N+GN F++ E+ + V+E+ N + + DP +
Sbjct: 236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQ 295
Query: 312 KATELLGWEPK 322
KA E LGW+P+
Sbjct: 296 KAKEKLGWDPR 306
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 221 (82.9 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 74/239 (30%), Positives = 113/239 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK-DNLRKWIGHPRFELIRHD 89
ILVTG AGFIG HL +L++ + V+ +DN Y K D LR+ G F +R
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRG-DRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 90 VTE-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
+ + P L ++ D + +LA A + NP + +N++G +N+L + G +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 143 LL-TSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
L+ S+S VYG P S NV+ P+ S Y K+ E + Y +G+
Sbjct: 123 LVYASSSSVYGANTAMPF--SIHHNVDHPV---SLYAATKKANELMAHTYSSLYGLPTTG 177
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
R F YGP D + F + G P+ V G R F YV D+V+G+ R+M+
Sbjct: 178 LRFFTVYGPWGRPDMALFL--FTKAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMD 234
Score = 44 (20.5 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 20/82 (24%), Positives = 34/82 (41%)
Query: 260 GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENT-P---DDPRQRKPDITKATE 315
G + P I N G +EL + E I N+ IT +N P D D+
Sbjct: 251 GTSYAPYRIYNIGNNNPVELLAFI-EAIEQNLGITAQKNLLPLQAGDVPATYADVDDLMN 309
Query: 316 LLGWEPKIKLRDGLPLMEDDFR 337
+G++P + +G+ + +R
Sbjct: 310 DVGFKPATPIGEGIERFVEWYR 331
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 230 (86.0 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 93/314 (29%), Positives = 149/314 (47%)
Query: 35 ILVTGGAGFIGSHLVDKL-MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV-TE 92
ILVTGGAG+IGSH+V +L ++NEK V+VVDN G K + R +LI D E
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEK--VLVVDNLSKGHKKAV-----DTRAKLIVGDFGDE 54
Query: 93 PLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 145
LL+E+ + Y H+A + P K + N+ TL++L + + + ++ +
Sbjct: 55 NLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFS 114
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST+ VYG+P P E + P + Y K V E + Y + HG R FN
Sbjct: 115 STAAVYGEPEKWPITEDF-----PQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFN 169
Query: 206 TYG--PRMNI-DDGRVVSNFIA---QAIRGEP--LTV-----QAP-GTQTRSFCYVSDMV 251
G P +I +D ++ I + I GE LTV P GT R + +V+D+
Sbjct: 170 AAGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLA 229
Query: 252 DG-LIRL--MEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP 308
+ ++ L + + +G N+GN F++ E+ + +E+ V++ + P DP
Sbjct: 230 EAHILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVA 289
Query: 309 DITKATELLGWEPK 322
K + L + PK
Sbjct: 290 SSEKIQKELNFTPK 303
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 158 (60.7 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-------SCYDEGKRVAETLMF 188
K+ R ST EVYGD L HP DE+ P+ S Y K ++ L+
Sbjct: 122 KKKSFRFHHISTDEVYGD-LPHP-DEANNNEALPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
+ R +G+ + N YGP + + +++ I A+ G+ L + G Q R + YV
Sbjct: 180 AWKRTYGLPTIVTNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVE 237
Query: 249 DMVDGLIRLM-EGENTGPINIGNPGEFTMLELAENVKELINPNV--------EITMVENT 299
D L ++ EG+ NIG E +++ + +L++ V +IT V +
Sbjct: 238 DHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADR 297
Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
P R+ D K + LGW+P+ G+
Sbjct: 298 PGHDRRYAIDADKISRELGWKPQETFESGI 327
Score = 125 (49.1 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 34/112 (30%), Positives = 58/112 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYAFEHADIC 60
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ + + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 157 (60.3 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETLMFD 189
K+ R ST EVYGD L HP + + + S Y K ++ L+
Sbjct: 122 KKKNFRFHHISTDEVYGD-LPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHLVRA 180
Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
+ R +G+ ++ N YGP + + +++ I A+ G+ L + G Q R + YV D
Sbjct: 181 WKRTYGLPTIVSNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVED 238
Query: 250 MVDGLIRLM-EGENTGPINIGNPGE-------FTMLELAENV--KELINPNVEITMVENT 299
L ++ EG+ NIG E FT+ +L + + KE + +IT V +
Sbjct: 239 HARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEK-SYREQITYVADR 297
Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
P R+ D K + LGW+P+ G+
Sbjct: 298 PGHDRRYAIDADKISRELGWKPQETFESGI 327
Score = 126 (49.4 bits), Expect = 7.5e-18, Sum P(2) = 7.5e-18
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L + R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLAEISDSERYSFENADIC 60
Query: 92 EP----LLI---EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ L ++D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 152 (58.6 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 146 STSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
ST EVYGD L HP + + + S Y K ++ L+ + R +G+
Sbjct: 132 STDEVYGD-LPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTI 190
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM- 258
+ N YGP + + +++ I A+ G+ L + G Q R + YV D L ++
Sbjct: 191 VTNCSNNYGP-YHFPE-KLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVT 248
Query: 259 EGENTGPINIGNPGEFTMLELAENVKELINPNV--------EITMVENTPDDPRQRKPDI 310
EG+ NIG E +++ + +L++ V +IT V + P R+ D
Sbjct: 249 EGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDA 308
Query: 311 TKATELLGWEPKIKLRDGL 329
K LGW+P+ G+
Sbjct: 309 EKIGRALGWKPQETFESGI 327
Score = 131 (51.2 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G++++L R+ D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADIC 60
Query: 92 E-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ P + + D + HLA + P I+TN++GT +L A+
Sbjct: 61 DAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAAR 112
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 228 (85.3 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 83/328 (25%), Positives = 142/328 (43%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTEPL 94
LVTGGAGFIG + V + + + V+ +D + G+ + L G+ ++ D+ +
Sbjct: 5 LVTGGAGFIGGNFVLEAV-SRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63
Query: 95 LI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----------R 137
L+ + D + + A + P I+TNV+GTL +L + R
Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123
Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
R L ST EVYG + + P S Y K ++ L+ +H +G+
Sbjct: 124 DAFRFLHVSTDEVYGTL----GETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
+ N YGP + + +++ IA+A+ GEPL V G Q R + +VSD + + +
Sbjct: 180 VLTTNCSNNYGP-YHFPE-KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKELINPN----------VEITMVENTPDDPRQR 306
+ G N+G E +E+ + + L++ + +I V + P R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 307 KPDITKATELLGWEPKIKLRDGLPLMED 334
D +K + LGWEP G+ L D
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGIALTVD 325
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 223 (83.6 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 90/316 (28%), Positives = 142/316 (44%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKD--NLRKWIGHPRFELIRH 88
RI+V+GGAGFIG H + +++ N +D NY + + + NL+ + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 89 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 143 ---LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
L ST EVYGD V+ D +NP Y K + ++ Y + + I
Sbjct: 124 GYFLHISTDEVYGD--VYEGDNKENAVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL--IRL 257
I R N YGP + +++ I +P+ V GT R + YV D+V + + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 258 MEGENT-GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATE 315
T I NIG E L L + + E+ EI +++ + D TK
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 316 LLGWEPKIKLRDGLPL 331
L GW PKI L GL L
Sbjct: 296 L-GWSPKISLVQGLQL 310
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 223 (83.6 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 90/316 (28%), Positives = 142/316 (44%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKD--NLRKWIGHPRFELIRH 88
RI+V+GGAGFIG H + +++ N +D NY + + + NL+ + FE +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSF---SNFEFVHL 64
Query: 89 DVTEPL--LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
D+++ L L+++ + I + A +S +PV K N++ T N+L R+ I
Sbjct: 65 DLSDNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPSI 123
Query: 143 ---LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
L ST EVYGD V+ D +NP Y K + ++ Y + + I
Sbjct: 124 GYFLHISTDEVYGD--VYEGDNKENAVMNPTNP---YSASKAAIDLIIKSYQYSYKLPIT 178
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL--IRL 257
I R N YGP + +++ I +P+ V GT R + YV D+V + + +
Sbjct: 179 ILRPNNVYGPLQYPE--KIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWI 236
Query: 258 MEGENT-GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATE 315
T I NIG E L L + + E+ EI +++ + D TK
Sbjct: 237 KNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTKIHN 295
Query: 316 LLGWEPKIKLRDGLPL 331
L GW PKI L GL L
Sbjct: 296 L-GWSPKISLVQGLQL 310
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 214 (80.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 75/273 (27%), Positives = 127/273 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
MRILVTGGAGFIGS LV L+E ++ V+ D + ++L + R+ ++ D+
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 92 EPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
+ +E D + HLA + P + I+TN++GT +L A R + L
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLE-ACRSYYQTLG 119
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGV---RSCYDEG------KRVAETLMFDYHRQHG 195
+ + L H + +G++ G+ S YD K A+ L+ +HR +
Sbjct: 120 QAQQRRFR--LHHISTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYA 177
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ I I N YGP + +++ ++ A++ +PL + G Q R + YV D V L
Sbjct: 178 LPIVITNCSNNYGPFQYPE--KLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKALY 235
Query: 256 RLM-EGENTGPINIGNPGEFTMLELAENVKELI 287
+ +G+ NIG E T L + ++ L+
Sbjct: 236 LVATQGQLGQTYNIGGSCEQTNLTVVRHICSLL 268
Score = 42 (19.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 309 DITKATELLGWEPKIKLRDGL 329
D +K LGW P+ GL
Sbjct: 306 DASKIQRELGWRPQESFESGL 326
>TAIR|locus:2827733 [details] [associations]
symbol:AT2G28755 "AT2G28755" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR016040 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 EMBL:AC005727 GO:GO:0016829 IPI:IPI00528391
RefSeq:NP_180442.1 UniGene:At.52956 ProteinModelPortal:Q8S8L8
SMR:Q8S8L8 EnsemblPlants:AT2G28755.1 GeneID:817425
KEGG:ath:AT2G28755 TAIR:At2g28755 Genevestigator:Q8S8L8
Uniprot:Q8S8L8
Length = 56
Score = 203 (76.5 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 38/55 (69%), Positives = 47/55 (85%)
Query: 251 VDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ 305
++GL RLM G+ +GPINIGNPGEF+++ELAE VK LI P+VEI +VEN PDDPRQ
Sbjct: 1 MEGLKRLMAGDKSGPINIGNPGEFSIVELAETVKALIKPDVEIKIVENIPDDPRQ 55
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 218 (81.8 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 70/271 (25%), Positives = 125/271 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+LVTGGAGFIGS+ ++ + N VI +D + G+ NL +P + ++ D+ +
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAYRFVKGDIGD 69
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR---VGA-- 140
L+ +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 70 ADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIE 129
Query: 141 --RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
R L ST EVYG + Y+ P+ S Y K ++ L+ Y+ G+ +
Sbjct: 130 RFRFLHVSTDEVYGTL----GETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R N YGP + +++ I + G+PL V G R + +V D + ++
Sbjct: 186 LTTRCSNNYGP-FQFPE-KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVL 243
Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKELIN 288
+G G + N+G E+ +++ + +L++
Sbjct: 244 KGGKPGEVFNVGGNNEWFNIDIVHLLCDLLD 274
Score = 181 (68.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/260 (25%), Positives = 111/260 (42%)
Query: 89 DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR---VGA--- 140
D+ +L E +D + H A + P ++TNV+GT +L ++R GA
Sbjct: 71 DLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESGAIER 130
Query: 141 -RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
R L ST EVYG + Y+ P+ S Y K ++ L+ Y+ G+ +
Sbjct: 131 FRFLHVSTDEVYGTL----GETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVL 186
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
R N YGP + +++ I + G+PL V G R + +V D + +++
Sbjct: 187 TTRCSNNYGP-FQFPE-KLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIETVLK 244
Query: 260 GENTGPI-NIGNPGEFTMLELAENVKELIN-----PNVE----ITMVENTPDDPRQRKPD 309
G G + N+G E+ +++ + +L++ P E IT V++ R+
Sbjct: 245 GGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRYAIS 304
Query: 310 ITKATELLGWEPKIKLRDGL 329
K LGWEP G+
Sbjct: 305 AAKIKRELGWEPSYTFERGI 324
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 143 (55.4 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 45/170 (26%), Positives = 75/170 (44%)
Query: 169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR 228
P S Y K ++ L+ + R +G + N YGP + + +++ I A+
Sbjct: 178 PYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGP-YHFPE-KLIPLVILNALE 235
Query: 229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGENTGPINIGNPGEFTMLELAENVKELI 287
G+PL + G Q R + YV D L +++ EG+ NIG E LE+ + + ++
Sbjct: 236 GKPLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQTICSIL 295
Query: 288 N-------PNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
+ P E I V + P R+ D TK + L W+P+ GL
Sbjct: 296 DSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGL 345
Score = 124 (48.7 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L PR+ + D+
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLTYAGNLESLTSVADSPRYTFEKVDIC 60
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ +E D + HLA + I+TN++GT +L A+
Sbjct: 61 DRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 63 (27.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 95 LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK---------RVGA-RILL 144
L + D + HLA + I+TN++GT +L A+ R A R
Sbjct: 71 LHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQLNTERKSAFRFHH 130
Query: 145 TSTSEVYGDPLVHPQD 160
ST EVYGD L HP +
Sbjct: 131 ISTDEVYGD-LPHPDE 145
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 198 (74.8 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 69/240 (28%), Positives = 111/240 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
M+ LVTG AGFIGS +V++L ++V+ +DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 89 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 140
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
++ S+S VYG L + S V+ P+ S Y K+ E + Y + I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
R F YG D + F + + G+ + + G R F +V D+V+G+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 55 (24.4 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 12/63 (19%), Positives = 29/63 (46%)
Query: 267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR 326
NIG+ ++++ + +++ + + E P D Q D + + PKI ++
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVK 318
Query: 327 DGL 329
+G+
Sbjct: 319 EGV 321
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 198 (74.8 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 69/240 (28%), Positives = 111/240 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
M+ LVTG AGFIGS +V++L ++V+ +DN Y K I H F I+
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCA-AGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKM 59
Query: 89 DVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGA 140
D+ + ++ E+ D++ HLA A + NP+ +N+IG LN+L G
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVK 119
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
++ S+S VYG L + S V+ P+ S Y K+ E + Y + I
Sbjct: 120 HLIYASSSSVYG--LNNKVPFSTKDTVDHPV---SLYAATKKSNELMAHSYSHLYNIPTT 174
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
R F YG D + F + + G+ + + G R F +V D+V+G+IR+ +
Sbjct: 175 GLRFFTVYGSWGRPDMAPYI--FTKKILNGDTIDINNNGDMWRDFTHVDDIVEGVIRIAD 232
Score = 55 (24.4 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 12/63 (19%), Positives = 29/63 (46%)
Query: 267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR 326
NIG+ ++++ + +++ + + E P D Q D + + PKI ++
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVK 318
Query: 327 DGL 329
+G+
Sbjct: 319 EGV 321
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 214 (80.4 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 83/329 (25%), Positives = 150/329 (45%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV---------DNYFTGSKDNLRKWIGHPRF 83
M++ +TG G +GSHL + L+ ++V D F G++ ++ W +
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLA-AGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSV--Y 57
Query: 84 ELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--AR 141
+ I P D ++HLA + P PV+T+ TN++GT + +RV A+
Sbjct: 58 DSIA--TFRP-----DAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAK 110
Query: 142 ILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
I++ +S YG DP P +E + P+ Y K + L + YH+ +G+
Sbjct: 111 IIVAGSSAEYGFVDPSEVPINERR--ELRPLHP---YGVSKAATDMLAYQYHKSYGMHTV 165
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQT-RSFCYVSDMVDGL 254
+ARIFN GPR + D +S+F+ + E ++ +T R+ V D+ L
Sbjct: 166 VARIFNCTGPR-KVGDA--LSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRAL 222
Query: 255 IRLME-GENTGPINIGNPGEFTMLELAENV-----KELINPNVEITMVENTPDDPRQRKP 308
+ +++ GE N+G + M ++ + V ++ I P V+ ++ P D +
Sbjct: 223 MLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALLR--PTDEKIIYG 280
Query: 309 DITKATELLGWEPKIKLRDGLPLMEDDFR 337
D +K + GW+ +I L + M D +R
Sbjct: 281 DCSKLAAITGWQQEICLTQTIADMFDYWR 309
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 214 (80.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 69/275 (25%), Positives = 128/275 (46%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRH 88
+ ILVTGGAGFIGS +V +++N ++ V+ +D + G+ ++L +PR+ +
Sbjct: 4 EGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQV 63
Query: 89 DVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + ++ D + HLA + + + I+TN++GT ++L A+ +
Sbjct: 64 DICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQ 123
Query: 142 ILLTSTS-----EVYGDPL---VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
+ + D + +H D+ + P S Y K A+ L+ + R
Sbjct: 124 MPSEKREAFRFHHISTDEVYGDLHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRT 182
Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
+ + ++ N YGPR + +++ I A+ G+PL V G Q R + +V D
Sbjct: 183 YRLPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARA 240
Query: 254 LIRLM-EGENTGPINIGNPGEFTMLELAENVKELI 287
L +++ EG NIG E T LE+ + + L+
Sbjct: 241 LYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALL 275
Score = 169 (64.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/207 (28%), Positives = 88/207 (42%)
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
KR R ST EVYGD +H D+ + P S Y K A+ L+ + R +
Sbjct: 128 KREAFRFHHISTDEVYGD--LHGTDDLFT-ETTPYAPSSPYSASKAAADHLVRAWQRTYR 184
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ ++ N YGPR + +++ I A+ G+PL V G Q R + +V D L
Sbjct: 185 LPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALY 242
Query: 256 RLM-EGENTGPINIGNPGEFTMLELAENVKELIN------P----NVE--ITMVENTPDD 302
+++ EG NIG E T LE+ + + L+ P E IT V++ P
Sbjct: 243 QVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGH 302
Query: 303 PRQRKPDITKATELLGWEPKIKLRDGL 329
+ D K LGW P GL
Sbjct: 303 DARYAVDAAKIRRDLGWLPLETFESGL 329
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 214 (80.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 80/323 (24%), Positives = 139/323 (43%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTEPL 94
LVTG AGFIG + V + + + V+ +D + G+ + L G+ ++ D+ +
Sbjct: 5 LVTGRAGFIGGNFVLEAV-SRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGA 63
Query: 95 LI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----------R 137
L+ + D + + A + P I+TNV+GTL +L + R
Sbjct: 64 LVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRR 123
Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
R L ST EVYG + + P S Y K ++ L+ +H +G+
Sbjct: 124 DAFRFLHVSTDEVYGTL----GETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLP 179
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
+ N YGP + + +++ IA+A+ GEPL V G Q R + +VSD + + +
Sbjct: 180 VLTTNCSNNYGP-YHFPE-KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTV 237
Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKELINPN----------VEITMVENTPDDPRQR 306
+ G N+G E +E+ + + L++ + +I V + P R+
Sbjct: 238 LAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRY 297
Query: 307 KPDITKATELLGWEPKIKLRDGL 329
D +K + LGWEP G+
Sbjct: 298 AIDASKLKDELGWEPAYTFEQGI 320
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 212 (79.7 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 70/271 (25%), Positives = 125/271 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M ILVTGG+GFIGS L+ ++ + ++ VI +D + ++ LR+ +PR+ + D+
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 92 EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----- 139
+ +IE D + HLA + ++TN++GT +L +AK
Sbjct: 62 DLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDE 121
Query: 140 ARILLTSTSEVYGDPLVHPQD--ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
A+ + D + E + +P S Y K + L+ +HR +G+
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLP 181
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG-LIR 256
+ I N YG + + +++ I+ A+ G+PL + G Q R + +V D V +
Sbjct: 182 VIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLV 239
Query: 257 LMEGENTGPINIGNPGEFTMLELAENVKELI 287
L +G NIG E T LE+ + + +L+
Sbjct: 240 LTKGRVGENYNIGGNCEKTNLEVVKRICQLL 270
Score = 178 (67.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
AK+ R ST EVYGD + E + +P S Y K + L+ +HR +
Sbjct: 122 AKKTTFRFHHISTDEVYGDLSL---SEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTY 178
Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG- 253
G+ + I N YG + + +++ I+ A+ G+PL + G Q R + +V D V
Sbjct: 179 GLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQAS 236
Query: 254 LIRLMEGENTGPINIGNPGEFTMLELAENVKELIN------PN----VE--ITMVENTPD 301
+ L +G NIG E T LE+ + + +L+ PN E +T V++ P
Sbjct: 237 YLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPG 296
Query: 302 DPRQRKPDITKATELLGWEPKIKLRDGL 329
+ D +K LGW+P+I GL
Sbjct: 297 HDVRYSLDCSKIHAELGWQPQITFEQGL 324
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 211 (79.3 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 88/313 (28%), Positives = 145/313 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV--T 91
RILVTGGAG++GS LV +L+E V V D F G D L K +P ++ D+ T
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYR-VTVYDTLFFGD-DFLPK--ENPYLNIVEGDIRDT 62
Query: 92 EPL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
E L + D + LAC ++ ++ + + N+ M+ AK G R + S+
Sbjct: 63 ERLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASS 122
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI--EIRIARIFN 205
S VYG + +D + +P+ + Y++ K + E L+F + + IR A +
Sbjct: 123 SSVYG--VSETKDVT---EEHPLVPLTLYNKYKGMCEPLLFKHQSPEFVCVTIRPATLCG 177
Query: 206 TYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD--GLIRLMEGEN 262
Y PR +D +++N A+ +TV G+Q R +V DM D L+ ++ E
Sbjct: 178 -YAPRQRLDLSVNILTN---HAVNNNKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDEK 232
Query: 263 TG--PINIGNPGEFTMLELAENVKELIN---PN-VEITMVENTPDDPRQRKPDITKATEL 316
N+G + +++E+A VK ++ P I +V DD R + K
Sbjct: 233 IAGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKRC 291
Query: 317 LGWEPKIKLRDGL 329
LG+E K + D +
Sbjct: 292 LGFEAKYSIEDAV 304
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 210 (79.0 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 69/251 (27%), Positives = 119/251 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD---NYFTGS--KDNLRKWIGHPRFELIR 87
M+ILVTG AGFIGS + +L++ E + V VD Y+ +D + F L R
Sbjct: 1 MKILVTGAAGFIGSEMALRLLK-EGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLER 59
Query: 88 HDVTEPLLIEV-------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+ + +E + + H A A + +P I N++G+ N++ L++R G
Sbjct: 60 IRIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 141 R-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
+ +++ STS YG P +E + P + + Y K +E + + +G+
Sbjct: 120 QHLVMASTSSAYGANQKFPFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTT 175
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
+ R F+ YGP D + F + +G+P+ V G R F Y+ D+V+ + RLM+
Sbjct: 176 VLRFFSVYGPWGRPDMAFFL--FTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMD 233
Query: 260 GENTGPINIGN 270
T P+ +GN
Sbjct: 234 ---TPPV-VGN 240
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 57/257 (22%), Positives = 104/257 (40%)
Query: 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLVH 157
+ + H A A + +P I N++G+ N++ L++R G + +++ STS YG
Sbjct: 78 EMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMASTSSAYGANQKF 137
Query: 158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR 217
P +E + P + + Y K +E + + +G+ + R F+ YGP D
Sbjct: 138 PFEER---DSAPYPL-TIYAATKLASELIAHSHAHLYGVPTTVLRFFSVYGPWGRPDMAF 193
Query: 218 VVSN---FIAQAI----RGEPLT----VQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
+ F Q I G+ L + R +V ++ G++ P+
Sbjct: 194 FLFTDKIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPPVVGN--HIIRGDSLSPV 251
Query: 267 ------NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWE 320
NIGN +++ E ++ I E M++ P D +Q D+ L G+
Sbjct: 252 APYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDVKQTFADVRLLDALTGYT 311
Query: 321 PKIKLRDGLPLMEDDFR 337
P R G+ D +R
Sbjct: 312 PDTDYRTGIARFVDWYR 328
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 163 (62.4 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 52/195 (26%), Positives = 91/195 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+IL++GGAG+IGSH + + ++ + +E+ V+DN GSK + F+ D+++
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTD-HEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSD 59
Query: 93 ----PLLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
L E D I H A NP+K N + T N++ + G + +
Sbjct: 60 FQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIF 119
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR--IAR 202
+ST+ YG+P E+ +P+ + Y K ++E ++ D + E + I R
Sbjct: 120 SSTAATYGEPQTPVVSET-----SPLAPINPYGRSKLMSEEVLRDASMANP-EFKHCILR 173
Query: 203 IFNTYGPRMNIDDGR 217
FN G M+ G+
Sbjct: 174 YFNVAGACMDYTLGQ 188
Score = 85 (35.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 22/88 (25%), Positives = 41/88 (46%)
Query: 238 GTQTRSFCYVSDMVDGLIRLME--GENTGPI-NIGNPGEFTMLELAENVKELINPNVEIT 294
GT R F +V D+ + ++ EN + N+G F++ E+ E +K++ + ++
Sbjct: 223 GTCIRDFIHVDDISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVE 282
Query: 295 MVENTPDDPRQRKPDITKATELLGWEPK 322
+ DP D +K L W+PK
Sbjct: 283 LAPRRAGDPSVLISDASKIRNLTSWQPK 310
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 159 (61.0 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 68/250 (27%), Positives = 118/250 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRH 88
M++LVTGG G+IGSH ++++ VI+ DN + D + K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 89 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 142 ILLTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIR 199
L+ S+S VYG+P P ES+ P + Y K + E + D+ + + I
Sbjct: 118 SLVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSIT 172
Query: 200 IARIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN G P + +D + + N F+ Q A+ R E L+V T+ V D
Sbjct: 173 LLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 251 VDGLIRLMEG 260
+ ++ L +G
Sbjct: 233 IH-VMDLADG 241
Score = 87 (35.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 238 GTQTRSFCYVSDMVDGLIRLME--GENTGP--INIGNPGEFTMLELAENVKELINPNVEI 293
GT R + +V D+ DG I ++ G G N+G +++L++ + + V
Sbjct: 226 GTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPY 285
Query: 294 TMVENTPDDPRQRKPDITKATELLGWE 320
+V+ P D + D TKA + LGW+
Sbjct: 286 KLVDRRPGDIAEYWADPTKAAQDLGWK 312
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 159 (61.0 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 68/250 (27%), Positives = 118/250 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRH 88
M++LVTGG G+IGSH ++++ VI+ DN + D + K IG P+F ++
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVIL-DNLYNSKVTVLDRIEKVIGVRPQF--VQG 57
Query: 89 DVTEP-LLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + LL++ ++ + H A + P++ NV GTL ++ + G +
Sbjct: 58 DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
Query: 142 ILLTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIR 199
L+ S+S VYG+P P ES+ P + Y K + E + D+ + + I
Sbjct: 118 SLVFSSSATVYGEPTSVPITESF-----PTKAANPYGRSKLMVEECLTDFQKANPDWSIT 172
Query: 200 IARIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN G P + +D + + N F+ Q A+ R E L+V T+ V D
Sbjct: 173 LLRYFNPVGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDY 232
Query: 251 VDGLIRLMEG 260
+ ++ L +G
Sbjct: 233 IH-VMDLADG 241
Score = 87 (35.7 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 238 GTQTRSFCYVSDMVDGLIRLME--GENTGP--INIGNPGEFTMLELAENVKELINPNVEI 293
GT R + +V D+ DG I ++ G G N+G +++L++ + + V
Sbjct: 226 GTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKGYSVLDVVKAFETASGRTVPY 285
Query: 294 TMVENTPDDPRQRKPDITKATELLGWE 320
+V+ P D + D TKA + LGW+
Sbjct: 286 KLVDRRPGDIAEYWADPTKAAQDLGWK 312
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 85/314 (27%), Positives = 137/314 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
MR L+TG AGF+G +L + L E + EV F S++N K P E+I D+ +
Sbjct: 1 MRALITGVAGFVGKYLANHLTE-QNVEV------FGTSRNNEAKL---PNVEMISLDIMD 50
Query: 93 PLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARIL 143
I+ D I+HLA +S N T TNV GTL++L + + RIL
Sbjct: 51 SQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL 110
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
+SE YG ++ P+ ES N + S Y K L Y + +G++I R
Sbjct: 111 TIGSSEEYG--MILPE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRT 167
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAI-----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
FN GP ++ G V +F Q + + EP+ R F V D+V L
Sbjct: 168 FNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLS 225
Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKELINPNV--EITMVENTPDDPRQRKPDITKATE 315
+ TG + N+ + + ++ + + + N + E+ ++ P + + +
Sbjct: 226 QYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKD 285
Query: 316 LLGWEPKIKLRDGL 329
GW+P+I L L
Sbjct: 286 STGWKPRIPLEKSL 299
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 201 (75.8 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 68/273 (24%), Positives = 128/273 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTGGAGFIGS +V ++ N ++ V+ VD + G+ ++L + +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
++ D + HLA + + + I+TN++GT N+L A+ + + +
Sbjct: 63 RAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQ-MPS 121
Query: 146 STSEVYGDPLVHPQDESYWGNVN----------PIGVRSCYDEGKRVAETLMFDYHRQHG 195
E + H + +G++ P S Y K ++ L+ + R +G
Sbjct: 122 EQHEAFR--FHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ + N YGP + + +++ I A+ G+PL V G Q R + +V D L
Sbjct: 180 LPTIVTNCSNNYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 256 RLM-EGENTGPINIGNPGEFTMLELAENVKELI 287
+++ EG NIG E +E+ + + L+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALL 270
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 53/197 (26%), Positives = 83/197 (42%)
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + D+ + P S Y K ++ L+ + R +G+ + N
Sbjct: 133 STDEVYGD--LGGTDDLFTETA-PYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSN 189
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGENTG 264
YGP + + +++ I A+ G+PL V G Q R + +V D L +++ EG
Sbjct: 190 NYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGE 247
Query: 265 PINIGNPGEFTMLELAENVKELIN------P----NVE--ITMVENTPDDPRQRKPDITK 312
NIG E +E+ + + L+ P E IT V++ P + D K
Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAK 307
Query: 313 ATELLGWEPKIKLRDGL 329
LGW P GL
Sbjct: 308 IRRDLGWLPLETFESGL 324
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 198 (74.8 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 84/292 (28%), Positives = 128/292 (43%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 90 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 146 STSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
S ++ D +P DE+ N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 205 NTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N +GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVL 231
Query: 259 EGEN-TGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
N PI ++G E ++ E AE V E ++ + E+T + T D + +K
Sbjct: 232 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF-DTTKSDGQFKK 282
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 69/243 (28%), Positives = 105/243 (43%)
Query: 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLV 156
VD I H A S +P+ T N+ G L ML AK + + ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG 216
P+ E G P+ S Y K V E +H+ +G+ R FN +G R + D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 217 --RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP--G 272
V+ + I E L + G +R FC+V + V I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 273 EFTMLE-LAENVKELINPN-VEITMVENTPD----DPRQRKPDITKATELLGWEPKIKLR 326
+ T L L ++K + N V+ D D R + DI+KA L+G+EP+ K++
Sbjct: 270 DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKIQ 329
Query: 327 DGL 329
G+
Sbjct: 330 QGI 332
Score = 193 (73.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 77/277 (27%), Positives = 122/277 (44%)
Query: 36 LVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSK---DNLRKWIGHPR---FELIRH 88
L+TG AGFIGS+L++ L+ N+K V+ +DN+ TG + D ++ + + F ++
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQK--VVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 89 DVTE-----PLLIE----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
D+ + L VD I H A S +P+ T N+ G L ML AK
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
+ + ++S YGD P+ E G P+ S Y K V E +H+ +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNC 191
Query: 199 RIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
R FN +G R + D V+ + I E L + G +R FC+V + V I
Sbjct: 192 TGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANIL 251
Query: 257 LMEGENTGPINIGNP--GEFTMLE-LAENVKELINPN 290
+ G + N G+ T L L ++K + N
Sbjct: 252 AATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQAN 288
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 69/243 (28%), Positives = 105/243 (43%)
Query: 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLV 156
VD I H A S +P+ T N+ G L ML AK + + ++S YGD
Sbjct: 95 VDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQVKSFVYAASSSTYGDHPA 154
Query: 157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG 216
P+ E G P+ S Y K V E +H+ +G+ R FN +G R + D
Sbjct: 155 LPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNCTGLRYFNVFGKRQDPDGA 209
Query: 217 --RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP--G 272
V+ + I E L + G +R FC+V + V I + G + N G
Sbjct: 210 YAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAATANDAGKNQVYNVALG 269
Query: 273 EFTMLE-LAENVKELINPN-VEITMVENTPD----DPRQRKPDITKATELLGWEPKIKLR 326
+ T L L ++K + N V+ D D R + DI+KA L+G+EP+ K++
Sbjct: 270 DRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQADISKAKSLIGFEPEFKIQ 329
Query: 327 DGL 329
G+
Sbjct: 330 QGI 332
Score = 193 (73.0 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 77/277 (27%), Positives = 122/277 (44%)
Query: 36 LVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSK---DNLRKWIGHPR---FELIRH 88
L+TG AGFIGS+L++ L+ N+K V+ +DN+ TG + D ++ + + F ++
Sbjct: 19 LITGCAGFIGSNLLETLLLLNQK--VVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 89 DVTE-----PLLIE----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
D+ + L VD I H A S +P+ T N+ G L ML AK
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
+ + ++S YGD P+ E G P+ S Y K V E +H+ +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALPKVEDAIGK--PL---SPYAVTKYVNELYADVFHKTYGLNC 191
Query: 199 RIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
R FN +G R + D V+ + I E L + G +R FC+V + V I
Sbjct: 192 TGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANIL 251
Query: 257 LMEGENTGPINIGNP--GEFTMLE-LAENVKELINPN 290
+ G + N G+ T L L ++K + N
Sbjct: 252 AATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQAN 288
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 84/303 (27%), Positives = 134/303 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--E 92
+LVTG G+IGS LV KL+ N+ V VD ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 93 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
+ +YG DE+ NP+ + +E K E L +R A ++
Sbjct: 117 SCSIYGFQK-GAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG- 171
Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE----N 262
Y PRM D ++ + A + + + GTQ R +V D D ++ L++ + N
Sbjct: 172 YSPRMRFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEIN 229
Query: 263 TGPINIG-NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT--KATELLGW 319
IN+G + + L + + E++ ++ + DP R ++ K +L W
Sbjct: 230 GQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNW 289
Query: 320 EPK 322
+P+
Sbjct: 290 QPQ 292
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 84/303 (27%), Positives = 134/303 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--E 92
+LVTG G+IGS LV KL+ N+ V VD ++ GS D L + HP ELI DV +
Sbjct: 6 VLVTGAGGYIGSVLVPKLL-NKGYHVKAVDRFYFGS-DKLSQ---HPHLELINEDVRRLQ 60
Query: 93 P-LLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
P L VD + LA P+ IF K T + N + LAK+ R +L S
Sbjct: 61 PSLFTNVDYVIDLAAVSNDPSGDIFEK----ATWEINHQARVQSATLAKQQKVKRYILPS 116
Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
+ +YG DE+ NP+ + +E K E L +R A ++
Sbjct: 117 SCSIYGFQK-GAVDET--AKTNPLTTYAKANE-KAEKEILPLATDDFTVTVMRQATVYG- 171
Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE----N 262
Y PRM D ++ + A + + + GTQ R +V D D ++ L++ + N
Sbjct: 172 YSPRMRFD--LAINGMVYGAWEDKCIPLMRDGTQYRPMVHVQDTTDVMVLLLQADASEIN 229
Query: 263 TGPINIG-NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT--KATELLGW 319
IN+G + + L + + E++ ++ + DP R ++ K +L W
Sbjct: 230 GQIINVGCEEQNYQLQPLGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSFDKIKRILNW 289
Query: 320 EPK 322
+P+
Sbjct: 290 QPQ 292
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 198 (74.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 68/273 (24%), Positives = 128/273 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTGGAGFIGS +V ++ N ++ V+ +D + G+ ++L +PR+ + D+ +
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 93 PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
++ D + HLA + + + I+TN++GT N+L A R + + +
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAA-RAYRQQMPS 121
Query: 146 STSEVYGDPLVHPQDESYWGNVN----------PIGVRSCYDEGKRVAETLMFDYHRQHG 195
E + H + +G+++ P S Y K ++ L+ + R +G
Sbjct: 122 EKHEAFR--FHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ + N YGP + + +++ I A+ G+PL V G Q R + +V D L
Sbjct: 180 LPTIVTNCSNNYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALY 237
Query: 256 RLM-EGENTGPINIGNPGEFTMLELAENVKELI 287
+++ EG NIG E +E+ + + L+
Sbjct: 238 QVVTEGVVGETYNIGGHNEKANIEVVKTICALL 270
Score = 143 (55.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 53/197 (26%), Positives = 84/197 (42%)
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
ST EVYGD + D+ + P S Y K ++ L+ + R +G+ + N
Sbjct: 133 STDEVYGD--LSGTDDLFTETA-PYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSN 189
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGENTG 264
YGP + + +++ I A+ G+PL V G Q R + +V D L +++ EG
Sbjct: 190 NYGP-YHFPE-KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGE 247
Query: 265 PINIGNPGEFTMLELAENVKELIN------P----NVE--ITMVENTPDDPRQRKPDITK 312
NIG E +E+ + + L+ P E IT V++ P + D K
Sbjct: 248 TYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAK 307
Query: 313 ATELLGWEPKIKLRDGL 329
LGW+P GL
Sbjct: 308 IRRDLGWQPLETFESGL 324
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 201 (75.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 83/341 (24%), Positives = 149/341 (43%)
Query: 21 SPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK- 76
S R + + +LVTG AGF+G+H V ++ + VI +DN Y+ S R+
Sbjct: 85 SSARIRTSTNNGITVLVTGAAGFVGTH-VSAALKRRGDGVIGLDNFNDYYDPSLKRARRA 143
Query: 77 WIGHPRFELIRHDVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
+ ++ D+ + LL + + HLA A + NP + +N+ G +
Sbjct: 144 LLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFV 203
Query: 130 NMLGLAKRVGAR--ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
N+L + K V + I+ S+S VYG P E + P S Y K+ E +
Sbjct: 204 NLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTD-QPA---SLYAATKKAGEEIA 259
Query: 188 FDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP---GTQTRSF 244
Y+ +G+ + R F YGP D F ++G+ +++ GT R F
Sbjct: 260 HTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFF--FTKDILKGKSISIFESANHGTVARDF 317
Query: 245 CYVSDMVDGLIRLME---------GENTGP--INIGNPGEFTMLELAENVKELINPNVEI 293
Y+ D+V G + ++ G+ GP + + N G + + +++ V+ ++ +++
Sbjct: 318 TYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVR-ILERQLKV 376
Query: 294 TMVENTPDDPRQRK-P----DITKATELLGWEPKIKLRDGL 329
+N PR P +I+ A LG++P L+ GL
Sbjct: 377 KAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGL 417
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 150 (57.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/189 (28%), Positives = 91/189 (48%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLR--KWIGHPRFELIRHD 89
M +L+TGG G+IGSH V +L+++ K E+++VDN S L K I + I+ D
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQITNKTVTFIKAD 60
Query: 90 VTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG-LAKRVGAR 141
V + +E ++ + H A + P+ + NV GT+ +L +AK
Sbjct: 61 VCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKN 120
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNV-NPIGVRSCYDEGKRVAETLMFDYHRQHGI-EIR 199
++ +S++ VYG+ V P +E+ + NP Y + K + E ++FD + I
Sbjct: 121 LVFSSSATVYGNN-VSPLNETMATSATNP------YGQTKLMVEHVLFDLAKSDASWSIA 173
Query: 200 IARIFNTYG 208
R FN G
Sbjct: 174 CLRYFNPIG 182
Score = 91 (37.1 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 30/119 (25%), Positives = 53/119 (44%)
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME--GENTGP------INIGNPGEFTMLE 278
I G+ Q GT R + +V D+ G ++ +E G G IN+G ++LE
Sbjct: 217 IFGDDYDTQ-DGTGVRDYIHVVDLAQGHVKALESLGHAKGTVKGCQAINLGTGNGTSVLE 275
Query: 279 LAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
+ K++ ++ +V D D + A ELL W+ K+ L +++D +R
Sbjct: 276 IVNTFKDISKQDIPYQVVPRRAGDLATVYADASLANELLDWQAKLDLT---AMIQDTWR 331
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 153 (58.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 56/204 (27%), Positives = 96/204 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
M IL+TGGAG+IGSH +L+ N ++IVVDN S ++L K I +FE + +V
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNY-KIIVVDNLSNSSIESLNRVKEITGKQFEFYKENV 59
Query: 91 TE-----PLLIE--VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
+ +E ++ + H A +P+ Y YN N+I + + + +
Sbjct: 60 LNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYN-------NIISAIVLCDVMQ 112
Query: 137 RVGAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
+ + + +S++ VYG P P E + P+ V + Y + K + E +M D +
Sbjct: 113 KHNVKNFIFSSSATVYGIPKTLPITEEF-----PLSVTNPYGQTKLMIEQIMRDVAKADD 167
Query: 196 I-EIRIARIFNTYGPRMNIDDGRV 218
I + R FN +G + GR+
Sbjct: 168 EWSIALLRYFNPFGAHQS---GRI 188
Score = 87 (35.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEG--ENTG--PINIGNPGEFTMLELAENVKELINPNVEI 293
GT R + +V D+ G ++ +E + G N+G +++LE+ + +++ +
Sbjct: 226 GTGVRDYIHVVDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPY 285
Query: 294 TMVENTPDDPRQRKPDITKATELLGWEPKIKLRD 327
++ P D D++KA LGWE + L +
Sbjct: 286 KVIGRRPGDVAICFADVSKAKRELGWEAEYGLEE 319
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 197 (74.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 73/271 (26%), Positives = 118/271 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
+IL+TGGAGFIGS LV ++ + V+VVD + G+ +L RF + D+ +
Sbjct: 3 KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 93 PL-LIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
L V D + HLA + P I+TN++GT +L A+ +
Sbjct: 63 RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 146 STS-----EVYGDPL---VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
S + D + +H D+ ++ P S Y K ++ L+ + R +G+
Sbjct: 123 KKSAFRFHHISTDEVYGDLHSTDD-FFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLP 181
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
I N YGP + + +++ I A+ G+ L V G Q R + YV D L +
Sbjct: 182 TLITNCSNNYGP-YHFPE-KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCV 239
Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKELI 287
G NIG E L++ E + EL+
Sbjct: 240 ATTGKVGETYNIGGHNERKNLDVVETICELL 270
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 59/213 (27%), Positives = 88/213 (41%)
Query: 130 NMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
N L K+ R ST EVYGD +H D+ ++ P S Y K ++ L+
Sbjct: 117 NALTEDKKSAFRFHHISTDEVYGD--LHSTDD-FFTETTPYAPSSPYSASKASSDHLVRA 173
Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
+ R +G+ I N YGP + + +++ I A+ G+ L V G Q R + YV D
Sbjct: 174 WLRTYGLPTLITNCSNNYGP-YHFPE-KLIPLMILNALAGKSLPVYGNGQQIRDWLYVED 231
Query: 250 MVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELIN---PNVE---------ITMV 296
L + G NIG E L++ E + EL+ PN IT V
Sbjct: 232 HARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFV 291
Query: 297 ENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
+ P + D +K LGW P+ G+
Sbjct: 292 ADRPGHDLRYAIDASKIARELGWLPQETFESGM 324
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 193 (73.0 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 67/241 (27%), Positives = 108/241 (44%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKD-NLRKWIGHPRFELIR 87
MR LVTG AGFIG HL +L+ + ++ +DN Y K+ L + P F +
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARG-DHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHK 64
Query: 88 HDVTEPL----LIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 139
D+ + L + D + HLA A + NP + +N++G ++L G +
Sbjct: 65 LDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSV 124
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
++ S+S VYG +P ES NV+ PI + Y K+ E + Y +
Sbjct: 125 KHLVFASSSSVYGANEKYPFSES--DNVDHPIAL---YAASKKANELMAHSYAHLFQLPC 179
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R F YGP D + F + +P+ V G +R F Y+ D+VDG++ +
Sbjct: 180 TGLRFFTVYGPWGRPD--MALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTL 237
Query: 259 E 259
+
Sbjct: 238 D 238
Score = 38 (18.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 10/63 (15%), Positives = 26/63 (41%)
Query: 267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR 326
NIG+ + +++ +N + P D + D+++ + + P+ L+
Sbjct: 265 NIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQ 324
Query: 327 DGL 329
G+
Sbjct: 325 KGV 327
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 199 (75.1 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 83/326 (25%), Positives = 142/326 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRKWIGHPR-FELIRHDV 90
+LVTG GF+GSH V + + V+ +DN Y+ S R+ + R ++ D+
Sbjct: 90 VLVTGATGFVGSH-VSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDL 148
Query: 91 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 141
+ L+ +V + HLA A + NP + +N+ G +N+L + K +
Sbjct: 149 NDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPA 208
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
I+ S+S VYG P ES + P S Y K+ E + Y+ +G+ I
Sbjct: 209 IVWASSSSVYGLNEKVPFSESDRTD-QPA---SLYAATKKAGEEITHTYNHIYGLAITGL 264
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT---RSFCYVSDMVDGLIRLM 258
R F YGP D +F ++G+P+T+ + R F Y+ D+V G + +
Sbjct: 265 RFFTVYGPWGRPD--MAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSL 322
Query: 259 E--GENTG---------P---INIGNPGEFTMLELAENVKELINPNVEITMVENTPD-DP 303
+ G++TG P N+GN T+ L + +++ + + VE + D
Sbjct: 323 DSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDV 382
Query: 304 RQRKPDITKATELLGWEPKIKLRDGL 329
+I+ A G++P L GL
Sbjct: 383 PFTHANISSARNEFGYKPTTDLETGL 408
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 156 (60.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 49/147 (33%), Positives = 69/147 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI-- 86
M I + G GFIGSHL +KLM ++V+ +D Y K L +W G +F I
Sbjct: 18 MTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFHRINI 77
Query: 87 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+HD E L+ D +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 146 STSEVYGD------PLVHP--QDESYW 164
ST EVYG P HP QD ++
Sbjct: 138 STCEVYGKTIGSFLPKDHPLRQDPEFY 164
Score = 150 (57.9 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 61/206 (29%), Positives = 98/206 (47%)
Query: 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP--L 155
+D IY A P+ KY + T + G K +G+ L + DP
Sbjct: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDHPLRQDPEFY 164
Query: 156 VHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN- 212
V +D S +G++ R Y K++ E L++ ++G+E I R FN GPRM+
Sbjct: 165 VLKEDISPCIFGSIEK--QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDF 222
Query: 213 ---ID---DG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-- 262
ID +G RV++ F +R EPL + G R+F Y+ D ++ ++ ++E
Sbjct: 223 IPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERA 282
Query: 263 TGPI-NIGNPG-EFTMLELAENVKEL 286
G I N+GNP E T+ +LAE + E+
Sbjct: 283 NGHIFNVGNPNNEVTVRQLAEMMTEV 308
Score = 85 (35.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 254 LIRLMEGENTGPINIGNPG-EFTMLELAENVKELI----------NPNVEITMVE---NT 299
+I E N N+GNP E T+ +LAE + E+ +P ++++ E
Sbjct: 275 MIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEG 334
Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRD 327
DD +R PD+T LGW PK L D
Sbjct: 335 YDDSDKRIPDMTIINRQLGWNPKTSLWD 362
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 194 (73.4 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 81/310 (26%), Positives = 129/310 (41%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
N RI V G G +GS +V KL +++ + G D LR F
Sbjct: 4 NARIYVAGHRGLVGSAIVRKLTAEGYGNLLLRTS---GELD-LRDQAAVAAF----FAAE 55
Query: 92 EPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSE 149
+P D ++ A I P + I N++ N++ + R G +++L ++
Sbjct: 56 QP-----DYVFLAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTC 110
Query: 150 VYGDPLVHPQDESYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
+Y P E Y G + P Y K +L Y+RQ+G A N Y
Sbjct: 111 IYPKMASQPIREEYLLTGPLEP--TNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLY 168
Query: 208 GPRMNIDDGR------VVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
GP N D + ++ F I G P +TV G R F +V D+ D + LM
Sbjct: 169 GPNDNFDLEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRH 228
Query: 261 -ENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGW 319
E +NIG+ E ++ +LA VK ++ E+ + PD ++ D+++ L GW
Sbjct: 229 HEGNDIVNIGSGEEISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSL-GW 287
Query: 320 EPKIKLRDGL 329
+I L DG+
Sbjct: 288 RHRIGLEDGV 297
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 194 (73.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 83/291 (28%), Positives = 130/291 (44%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
+MRILVTGG+G +G + K++ + + + + F SKD +L
Sbjct: 7 SMRILVTGGSGLVG-RAIQKVVADGAG--LPGEEWVFVSSKDA----------DLTDAAQ 53
Query: 91 TEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
T+ L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 54 TQALFQKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGARKVVSC 112
Query: 147 TSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
S ++ D +P DE+ N P Y KR+ + Y +QHG N
Sbjct: 113 LSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 206 TYGP--RMNIDDGRVVSNFIAQAIRGEP----LTVQAPGTQTRSFCYVSDMVDGLIRLM- 258
+GP NI+DG V+ I + + LTV G R F Y D+ I ++
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 259 EGENTGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
E PI ++G E ++ E AE V E ++ N E+T ++T D + +K
Sbjct: 233 EYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTF-DSTKSDGQYKK 282
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 193 (73.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 86/315 (27%), Positives = 131/315 (41%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIGHPRFELIRHD 89
M +LVTGGAG+IGSH+V +L E V+V DN TG D L + + + R D
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYT-VVVYDNLSTGFPDALVHGERLVTGDLSDTARLD 59
Query: 90 VTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
L +E + H A P+K N TLN+LG + G R + +S
Sbjct: 60 A---LFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSS 116
Query: 147 TSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
T+ VYG P +ES +NP G K ++E ++ D HG+ R FN
Sbjct: 117 TAAVYGIPDSGVAAEESATVPINPYGT------SKLMSEWMLRDVCAAHGMRSVALRYFN 170
Query: 206 TYG--PRMNIDDGRVVSNFI----AQAIRG--EPLTV-----QAP-GTQTRSFCYVSDMV 251
G P+ + + + QA G + + + P GT R + +V D+
Sbjct: 171 VAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLA 230
Query: 252 DG----LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
L L +G + IN+G ++ E+ + V+ + + P DP
Sbjct: 231 SAHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRRPGDPPSLV 290
Query: 308 PDITKATELLGWEPK 322
+A LLGW P+
Sbjct: 291 ARADRARTLLGWTPR 305
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 153 (58.9 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 52/157 (33%), Positives = 76/157 (48%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RI+VTGGAG+IGSH V +L+E VIV DN S + +++ E+ H V
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIV-DNLSNSSLEAIKRVESITGKEIEFHHVDIM 65
Query: 94 LLIEVDQIYHLACPASPIFY-------KYN--PVKTIKTNVIGTLNMLGLA-KRVGARIL 143
+D+I+ S I + + N P+K N+ GTL +L L K +++
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125
Query: 144 LTSTSEVYGDPLVHPQDESY-WGNVNPIGVRSCYDEG 179
+S++ VYGDP P E + NP G Y EG
Sbjct: 126 FSSSATVYGDPHTVPITEDFPLSATNPYGRTKLYVEG 162
Score = 76 (31.8 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEG---ENTGPI--NIGNPGEFTMLELAENVKELINPNVE 292
GT R F +V D+ G I + + G + N+G +++LE+ +K+ + +
Sbjct: 231 GTGVRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIP 290
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWE 320
+V D D +KA + LGW+
Sbjct: 291 YQIVSRRKGDVASSFADPSKALKELGWK 318
Score = 41 (19.5 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 168 NPIGVRSCY---DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFI 223
NP+G ++ K + LM Y Q I R I + +G N DG V +FI
Sbjct: 183 NPVGAHPSGLIGEDPKDIPNNLM-PYVTQTAIGKR--PILSIFGNDYNTPDGTGVRDFI 238
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 192 (72.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 83/288 (28%), Positives = 125/288 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RILVTGG+G +G + K++E+ + D F SKD +L T
Sbjct: 9 RILVTGGSGLVG-RAIQKVVEDGAR-LPGEDWVFVSSKDA----------DLTDAAQTRA 56
Query: 94 LLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
L +V + HLA +F KYN + + N+ N+L A VG R +++ S
Sbjct: 57 LFQQVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNIHINDNVLHSAFEVGVRKVVSCLST 115
Query: 150 -VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
++ D +P DE+ N P Y KR+ + Y +QHG N +G
Sbjct: 116 CIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFG 175
Query: 209 PRMN--IDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLI-RLMEGE 261
P N I+DG V+ I + G LTV G R F Y D+ I L E +
Sbjct: 176 PHDNFSIEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWALREYD 235
Query: 262 NTGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
PI ++G E ++ E AE V E ++ + E+T + T D + +K
Sbjct: 236 EVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTF-DTTKSDGQFKK 282
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 196 (74.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 79/328 (24%), Positives = 144/328 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRKWI-GHPRFELIRH 88
+ +LVTG +GF+G+H V + + V+ +DN Y+ R+ + ++
Sbjct: 96 LTVLVTGASGFVGTH-VSIALRRRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEG 154
Query: 89 DVTEPLLIE--VD-----QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + +L+ D + HLA A + NP + +N+ G +N+L ++K +
Sbjct: 155 DINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQ 214
Query: 142 --ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
I+ S+S VYG P E + P S Y K+ E + Y+ +G+ +
Sbjct: 215 PAIVWASSSSVYGLNSKVPFSEKDRTD-QPA---SLYAATKKAGEGIAHTYNHIYGLSLT 270
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV-QAP--GTQTRSFCYVSDMVDGLIR 256
R F YGP D F ++G+ +TV ++P G+ R F Y+ D+V G +
Sbjct: 271 GLRFFTVYGPWGRPDMAYFF--FTKDILKGKTITVFESPDKGSVARDFTYIDDIVKGCLG 328
Query: 257 LME---------GENTGPI-----NIGNPGEFTMLELAENVKELINPNVEITMVENTPD- 301
++ G+ GP N+GN + +L +++L+ + ++ +
Sbjct: 329 ALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNG 388
Query: 302 DPRQRKPDITKATELLGWEPKIKLRDGL 329
D +IT A LG++P + L GL
Sbjct: 389 DVEFTHANITLAQAELGYKPAVDLETGL 416
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 152 (58.6 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 43/127 (33%), Positives = 63/127 (49%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI-- 86
+ I + G GFIGSHL +KL+ ++V+ +D Y K L +W G +F I
Sbjct: 18 LTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFHRINI 77
Query: 87 RHDVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+HD E L+ D I +LA +P Y P+ TI +N I L ++ R++
Sbjct: 78 KHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
Query: 146 STSEVYG 152
ST EVYG
Sbjct: 138 STCEVYG 144
Score = 152 (58.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 60/206 (29%), Positives = 99/206 (48%)
Query: 98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVH 157
+D IY A P+ KY + T + G K +G+ L + DP +
Sbjct: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDHPLRDDPAFY 164
Query: 158 --PQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN- 212
+D S +G++ R Y K++ E L++ ++G+E I R FN GPRM+
Sbjct: 165 VLKEDISPCIFGSIEK--QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDF 222
Query: 213 ---ID---DG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-- 262
ID +G RV++ F +R EPL + G R+F Y++D ++ ++ ++E
Sbjct: 223 IPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERA 282
Query: 263 TGPI-NIGNPG-EFTMLELAENVKEL 286
G I N+GNP E T+ +LAE + E+
Sbjct: 283 NGHIFNVGNPNNEVTVRQLAEMMTEV 308
Score = 86 (35.3 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 29/88 (32%), Positives = 41/88 (46%)
Query: 254 LIRLMEGENTGPINIGNPG-EFTMLELAENVKELI----------NPNVEITMVE---NT 299
+I E N N+GNP E T+ +LAE + E+ +P V+++ E
Sbjct: 275 MIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEG 334
Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRD 327
DD +R PD+T LGW PK L D
Sbjct: 335 YDDSDKRIPDMTIINRQLGWNPKTSLWD 362
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 191 (72.3 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 82/291 (28%), Positives = 129/291 (44%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
+MRILVTGG+G +G + K++ + + + + F SKD +L
Sbjct: 7 SMRILVTGGSGLVG-RAIQKVVADGAG--LPGEEWVFVSSKDA----------DLTDAAQ 53
Query: 91 TEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
T+ L +V + HLA +F KYN + + NV N+L A VG R +++
Sbjct: 54 TQALFQKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGTRKVVSC 112
Query: 147 TSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
S ++ D +P DE+ N P Y KR+ + Y +QHG N
Sbjct: 113 LSTCIFPDKTTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTN 172
Query: 206 TYGP--RMNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
+GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 173 VFGPYDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLR 232
Query: 260 GEN-TGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
N PI ++G E ++ E AE V E ++ + E+T ++T D + +K
Sbjct: 233 EYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTF-DSTKSDGQYKK 282
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 185 (70.2 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 79/273 (28%), Positives = 118/273 (43%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 90 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 146 STSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
S ++ D +P DE+ N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 205 NTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N +GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVL 231
Query: 259 EGEN-TGPI--NIGNPGEFTMLELAENVKELIN 288
N PI ++G E ++ E AE V E ++
Sbjct: 232 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 188 (71.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 83/290 (28%), Positives = 126/290 (43%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR--FELIRHD 89
++RILVTGG+G +G + K++ + + D F SKD R FE +R
Sbjct: 7 SVRILVTGGSGLVG-RAIQKVVADGAG-LPGEDWVFVSSKDADLTDAAQTRALFEKVR-- 62
Query: 90 VTEPLLIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
P + HLA +F KYN + + NV N+L A VG R +++
Sbjct: 63 ---PT-----HVIHLAAMVGGLFRNIKYN-LDFWRKNVHINDNVLHSAFEVGVRKVVSCL 113
Query: 148 SE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
S ++ D +P DE+ N P Y KR+ + Y +QHG N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNV 173
Query: 207 YGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
+GP NI+DG V+ I + G LTV G R F Y D+ I ++
Sbjct: 174 FGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVLRE 233
Query: 261 EN-TGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
N PI ++G E ++ E AE V E ++ + E+T + T D + +K
Sbjct: 234 YNEVEPIILSVGEEDEVSIQEAAEAVVEAMDFHGEVTF-DTTKSDGQFKK 282
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 78/326 (23%), Positives = 141/326 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK-WIGHPRFELIRHDV 90
+LVTG AGF+G+H V ++ + V+ +DN Y+ S R+ + ++ D+
Sbjct: 93 VLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDI 151
Query: 91 TEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-- 141
+ L+ EV + HLA A + NP + +N+ G +N+L + K +
Sbjct: 152 NDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPA 211
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
I+ S+S VYG P E + P S Y K+ E + Y+ +G+ +
Sbjct: 212 IVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLTGL 267
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP---GTQTRSFCYVSDMVDGLIRLM 258
R F YGP D F ++G+ +++ GT R F Y+ D+V G + +
Sbjct: 268 RFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCLGAL 325
Query: 259 E---------GENTGP-----INIGNPGEFTMLELAENVKELINPNVEITMVENTPD-DP 303
+ G+ G N+GN + +L ++ L+ + +++ + D
Sbjct: 326 DTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDV 385
Query: 304 RQRKPDITKATELLGWEPKIKLRDGL 329
+ +I+ A LG++P L+ GL
Sbjct: 386 QFTHANISSAQRELGYKPTTDLQTGL 411
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 184 (69.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 69/256 (26%), Positives = 112/256 (43%)
Query: 99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----VGA------RILLTSTS 148
D + HLA + P I+TN++GT +L +A++ +G R ST
Sbjct: 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD 134
Query: 149 EVYGDPLVHPQD-ES-----YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
EVYGD L HP + E+ + S Y K ++ L+ + R +G+ +
Sbjct: 135 EVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTN 193
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGE 261
N YGP + + +++ I A+ G+PL + G Q R + YV D L ++ EG+
Sbjct: 194 CSNNYGP-YHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK 251
Query: 262 NTGPINIGNPGE-------FTMLELAEN-VKELINPNVEITMVENTPDDPRQRKPDITKA 313
NIG E FT+ +L + V + + +IT V + P R+ D K
Sbjct: 252 AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKI 311
Query: 314 TELLGWEPKIKLRDGL 329
+ LGW+P G+
Sbjct: 312 SRELGWKPLETFESGI 327
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 33/113 (29%), Positives = 60/113 (53%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
M+IL+TGGAGFIGS +V +++N ++ V+ +D + G+ ++L R+ D+
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 92 EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
+ I + D + HLA + P I+TN++GT +L +A++
Sbjct: 61 DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARK 113
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 158 (60.7 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 58/188 (30%), Positives = 87/188 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIGHPRFELIRHDVT 91
+LVTGGAG+IGSH V +L+E + V VVDNY S +L +K G L H V
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAV-VVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 92 ---EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR- 141
P L ++ D + H A + P+ N++GT+ +L + + G +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI-EIRI 200
++ +S++ VYG P P E +PI + Y K E + D HR +I +
Sbjct: 124 LVFSSSATVYGWPKEVPCTEE-----SPISATNPYGRTKLFIEEICRDVHRSDSEWKIIL 178
Query: 201 ARIFNTYG 208
R FN G
Sbjct: 179 LRYFNPVG 186
Score = 66 (28.3 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
Identities = 21/90 (23%), Positives = 35/90 (38%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEGENTGPI-----NIGNPGEFTMLELAENVKELINPNVE 292
GT R + +V D+ DG I + + I N+G ++LE+ ++ +
Sbjct: 231 GTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIP 290
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPK 322
+ M P D KA L W+ K
Sbjct: 291 LVMAGRRPGDAEVVYASTEKAERELNWKAK 320
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 175 (66.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 79/316 (25%), Positives = 121/316 (38%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + +I V G G +GS +V KL E +++ H +L
Sbjct: 10 SSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKT---------------HAELDL 54
Query: 86 IRHDVTEPLLIEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGAR- 141
R E + +Y + A N P I N+ N++ A G +
Sbjct: 55 TRQADVESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKK 114
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+L +S +Y P ES + Y K Y QHG +
Sbjct: 115 LLFLGSSCIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISG 174
Query: 202 RIFNTYGPRMNI--DDGRVVS----NFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGL 254
N YGP N ++ V+ F + G E + V G+ R F +V D+ D
Sbjct: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADAC 234
Query: 255 IRLMEG-ENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA 313
+ L++ +NIG+ E T+ ELAE VKE++ ++ PD ++ D +K
Sbjct: 235 VFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKL 294
Query: 314 TELLGWEPKIKLRDGL 329
L GW PK+ LRDGL
Sbjct: 295 ASL-GWTPKVSLRDGL 309
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 170 (64.9 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 68/241 (28%), Positives = 106/241 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK-DNLRKWIGHPRFELIR 87
M+ LVTG AGFIG++ V K + +EV+ +DN Y K L F I+
Sbjct: 1 MKYLVTGAAGFIGAN-VSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 88 HDVTE-----PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 139
D+ + L + ++ HLA A + NP+ +N++G L +L G
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
++ S+S VYG L S +V+ PI S Y K+ E + Y + +
Sbjct: 120 EHLVYASSSSVYG--LNQKMPFSTEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPT 174
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R F YGP D + F + GE + V G +R F Y+ D+V+G+IR+
Sbjct: 175 TGLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQ 232
Query: 259 E 259
+
Sbjct: 233 D 233
Score = 42 (19.8 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 12/71 (16%), Positives = 28/71 (39%)
Query: 267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR 326
NIGN +L+ ++ + + + P D D + +G++ ++ +
Sbjct: 260 NIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
Query: 327 DGLPLMEDDFR 337
G+ D +R
Sbjct: 320 TGVAKFVDWYR 330
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 170 (64.9 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 68/241 (28%), Positives = 106/241 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK-DNLRKWIGHPRFELIR 87
M+ LVTG AGFIG++ V K + +EV+ +DN Y K L F I+
Sbjct: 1 MKYLVTGAAGFIGAN-VSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 88 HDVTE-----PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVG 139
D+ + L + ++ HLA A + NP+ +N++G L +L G
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKI 119
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
++ S+S VYG L S +V+ PI S Y K+ E + Y + +
Sbjct: 120 EHLVYASSSSVYG--LNQKMPFSTEDSVDHPI---SLYAATKKANELMSHTYSHLYQLPT 174
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
R F YGP D + F + GE + V G +R F Y+ D+V+G+IR+
Sbjct: 175 TGLRFFTVYGPWGRPD--MALFKFTKAILAGETIDVYNHGDLSRDFTYIDDIVEGIIRVQ 232
Query: 259 E 259
+
Sbjct: 233 D 233
Score = 42 (19.8 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 12/71 (16%), Positives = 28/71 (39%)
Query: 267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR 326
NIGN +L+ ++ + + + P D D + +G++ ++ +
Sbjct: 260 NIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
Query: 327 DGLPLMEDDFR 337
G+ D +R
Sbjct: 320 TGVAKFVDWYR 330
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 175 (66.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 74/264 (28%), Positives = 123/264 (46%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIG--HPRFELIRH 88
MR+LVTGG+G+IGSH +L++N ++VI++DN + L + +G HP F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ E L+ E+ D + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
+ +S++ VYGD P ES+ P G +S Y + K + E ++ D + Q I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQ-AI-RGEPLTVQAPGTQTRSFCYVSD 249
+ R FN G + D G + +N +IAQ A+ R + L + T V D
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 250 MVDGLIRLMEGENTGPINIGN-PG 272
+ ++ L +G + N PG
Sbjct: 233 YIH-VMDLADGHVVAMEKLANKPG 255
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 178 (67.7 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 64/243 (26%), Positives = 107/243 (44%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGSKDNLRK-WIGHPRFELIRH 88
+ +LVTG AGF+GSH + + V+ DN Y+ S R+ + + ++
Sbjct: 112 LSVLVTGAAGFVGSHC-SLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 89 DVTE-PLL------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ + PLL + I HLA A + NP I +N+ G +N+L +AK +
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 142 --ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
I+ S+S VYG +P E + + P S Y K+ E + Y+ +G+ +
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLSLT 286
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV-QAPGTQ--TRSFCYVSDMVDGLIR 256
R F YGP D F + G+ + + + Q R F Y+ D+V G +
Sbjct: 287 GLRFFTVYGPWGRPDMAYFF--FTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVG 344
Query: 257 LME 259
++
Sbjct: 345 ALD 347
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 62/246 (25%), Positives = 110/246 (44%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFEL 85
++ + +LVTG AGF+G+H V ++ + V+ +DN Y T K + + + +
Sbjct: 89 RNGVSVLVTGAAGFVGTH-VSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFI 147
Query: 86 IRHDVTEPLLI----EV---DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
+ D+ + L+ EV + HLA A + NP + +N+ G +N+L + K
Sbjct: 148 VEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVHSNIAGFVNLLEVCKSA 207
Query: 139 GAR--ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
+ I+ S+S VYG P E + P S Y K+ E + Y+ +G+
Sbjct: 208 NPQPAIVWASSSSVYGLNTKVPFSEKDRTD-QPA---SLYAATKKAGEEIAHTYNHIYGL 263
Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV---QAPGTQTRSFCYVSDMVDG 253
+ R F YGP D F ++G+ +++ GT R F Y+ D+V G
Sbjct: 264 SLTGLRFFTVYGPWGRPDMAYFF--FTRDILKGKAISIFEGANHGTVARDFTYIDDIVKG 321
Query: 254 LIRLME 259
+ ++
Sbjct: 322 CLGALD 327
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 85/339 (25%), Positives = 146/339 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRH-- 88
+ +TG G GS+L + L+ E + +I + F + ++ + L H
Sbjct: 4 KAFITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYG 63
Query: 89 DVTEPLLI-----EVD--QIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG- 139
D+T+ L++ E+ ++Y+LA S + ++ PV T++T +GTLN+L K
Sbjct: 64 DITDGLVLNKLIHEIKPHEVYNLAAQ-SHVRVSFDIPVYTMETIGLGTLNILEAIKNADN 122
Query: 140 ---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
R S+SE+YGD PQ ES P RS Y K A +Y +G+
Sbjct: 123 AKEIRFYQASSSEMYGDVKSVPQTES-----TPFNPRSPYACAKVFAHYQTINYRESYGL 177
Query: 197 EIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDGL 254
+FN PR R +++ IA+ + G + + R + Y D V+ +
Sbjct: 178 HASTGILFNHESPRRGETFVTRKITSGIAKILAGLEKKIYLGNLEAKRDWGYAKDYVEAM 237
Query: 255 IRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT--- 311
+++ + I +++ EL E L+N N +V + P R + D+
Sbjct: 238 WLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLNWRDFVVID-PKYYRPAEVDLLLGE 296
Query: 312 --KATELLGWEPKIKLRDGLPLM-EDDFR-LRLAVPRKN 346
KA E LGW+P + +M E DF+ + +P N
Sbjct: 297 PKKAKEKLGWQPNTSFHKLIKIMLEHDFKSYGVMLPSSN 335
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/203 (27%), Positives = 94/203 (46%)
Query: 21 SPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKW 77
SP FS+ + +LVTGGAG+IGSH +L+ + V +VDN G+ L++
Sbjct: 83 SPSAFSQREEGVTHVLVTGGAGYIGSHAALRLLR-DSYRVTIVDNLSRGNLGAVKTLQQL 141
Query: 78 IGHP-RFELIRHDVTEPLLIE-------VDQIYHLACPA---SPIFYKYNPVKTIKTNVI 126
R + I D+ +PL +E D + H A A Y I +N +
Sbjct: 142 FPQTGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTL 201
Query: 127 GTLNMLGLAKRVGARILLTSTSEVYGDPLVHP-QDESYWGNVNPIGVRSCYDEGKRVAET 185
G L +A+ +++ +ST YG+P P +++ +NP Y + K++AE
Sbjct: 202 GVLE--AMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINP------YGKAKKMAED 253
Query: 186 LMFDYHRQHGIEIRIARIFNTYG 208
++ D+ + + + I R FN G
Sbjct: 254 MILDFSKNSDMAVMILRYFNVIG 276
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 75/324 (23%), Positives = 149/324 (45%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSKDNLRKWIGHPR----F-- 83
MR+ +TGGAGFIGS L L E K+E++++D T NL+ + GH + F
Sbjct: 1 MRVAITGGAGFIGSQLALNLQE--KHEILIIDKMRSSATFENGNLQSF-GHFKNLLEFDG 57
Query: 84 ELIRHDVT-EPLLIEVDQ-----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
EL D+ E +L +++ I+H A + + + K ++TN+ + + L+
Sbjct: 58 ELFAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVF--DQTKVLQTNLNTFKDFIELSID 115
Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH-RQHGI 196
+ A+++ S++ VYGD PQ + + P ++ Y K + + L Y+ + H +
Sbjct: 116 LNAKLIYASSASVYGDAK-SPQ--TVGKDEEP---KNPYAFSKLMMDKLAKKYYDKAHLV 169
Query: 197 EIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDG 253
+R FN YG + +V F Q + G+ P + R F Y+ D+++
Sbjct: 170 GLRY---FNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINA 226
Query: 254 LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA 313
+ ++ + G N+G+ T ++ + +++ + ++ + N Q + K
Sbjct: 227 NLIALDSK-CGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTE-AKL 284
Query: 314 TELLGWEPKIKLRDGLPLMEDDFR 337
+ ++PK L +G+ D+ +
Sbjct: 285 DQTWDYQPKFSLEEGIKDYLDEIK 308
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 85/325 (26%), Positives = 137/325 (42%)
Query: 19 TPSPLRFSKFF-QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW 77
T S ++ F + + +I V G G +GS +V KL + +++ T S+ +L
Sbjct: 5 TGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLR----THSELDLTSQ 60
Query: 78 IGHPRFELIRHDVTEPLLI-EVDQIY-HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA 135
F V L +V I+ + PA F N I+TNVI + G+
Sbjct: 61 SDVESFFATEKPVYVILAAAKVGGIHANNTYPAD--FIGVN--LQIQTNVIHSAYTHGVK 116
Query: 136 KRVGARILLTSTSEVYGD--PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
K +L +S +Y P P+ G + P Y K + Y Q
Sbjct: 117 K-----LLFLGSSCIYPKFAPQPIPESALLTGPLEP--TNEWYAIAKIAGIKMCQAYRLQ 169
Query: 194 HGIEIRIARIFNTYGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCY 246
H + N YG N ++ V+ + A+A + + V G+ R F +
Sbjct: 170 HQWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLH 229
Query: 247 VSDMVDGLIRLMEGENTG--PINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR 304
V D+ D + LM+ + +G +N+G+ E T+ ELAE VKE++ ++ PD
Sbjct: 230 VDDLADACVFLMD-QYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTP 288
Query: 305 QRKPDITKATELLGWEPKIKLRDGL 329
++ D +K L GW PKI L+DGL
Sbjct: 289 RKLMDSSKLASL-GWTPKISLKDGL 312
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 168 (64.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 81/320 (25%), Positives = 138/320 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
R+ VTG +GF+G HL L ++ + H R++L+ D
Sbjct: 4 RLFVTGLSGFVGKHLQAYLAAAHTPWALLP--------------VPH-RYDLLEPDSLGD 48
Query: 94 LLIEV-DQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSE 149
L E+ D + HLA P ++ +P +T++ N++GTLN+L K G L S+ +
Sbjct: 49 LWPELPDAVIHLAGQTYVPEAFR-DPARTLQINLLGTLNLLQALKARGFSGTFLYISSGD 107
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
VYG V + P R+ Y K AE+L + G + +AR FN GP
Sbjct: 108 VYGQ--VAEAALPIHEELIP-HPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGP 164
Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ------TRSFCYVSDMVDGLIRLMEGENT 263
D V+++ Q R + +QA + +R F V D++ +RL+
Sbjct: 165 GQK--DSFVIASAARQIARMKQ-GLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEA 221
Query: 264 GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKAT--ELLGWE 320
G + N+ + E + EL E + ++ +EI QR+ + A + GW+
Sbjct: 222 GAVYNVCSGQEQKIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSHARLHDTTGWK 281
Query: 321 PKIKLRDGLPLMEDDFRLRL 340
P+I ++ L + D+ R+
Sbjct: 282 PEITIKQSLRAILSDWESRV 301
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 169 (64.5 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 66/222 (29%), Positives = 102/222 (45%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDV 90
M ILVTGGAG+IG+H V +L+ N +EVIV+DN S + L + I + D+
Sbjct: 1 MTILVTGGAGYIGTHTVVELL-NAGSEVIVLDNLSNSSIEALDRVERITGKSVTFYQGDI 59
Query: 91 TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
L++ +D + H A + P+K + NV GTL + + + +
Sbjct: 60 LNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKNL 119
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIEIRIA 201
+ +S++ VYGDP P E + P G + Y + K + E ++ D +H I
Sbjct: 120 VFSSSATVYGDPASLPITEDF-----PTGATNPYGQSKLMVEHILADLHHSDPSWNIARL 174
Query: 202 RIFNTYGPR----MNIDDGRVVSN---FIAQAIRG--EPLTV 234
R FN G + D + +N FIAQ G E L+V
Sbjct: 175 RYFNPVGAHASGLIGEDPNDIPNNLMPFIAQVAVGKREALSV 216
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 169 (64.5 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 91/348 (26%), Positives = 153/348 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------DNLRKW--IGHPRFEL 85
RILVTGGAG+IGSH V +L E E +V+DN ++ ++L++ I
Sbjct: 8 RILVTGGAGYIGSHCVLQLAE-AGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAF 66
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+T+ + + H A + P++ N+ GT+ +L +
Sbjct: 67 QELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAY 126
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHR-QHG 195
R I+ +S++ VYGDP P DE + P+G + Y + K E ++ D + + G
Sbjct: 127 SVRNIVFSSSATVYGDPQYLPLDEKH-----PVGGCTNPYGKSKYFIEEMIQDLCKAEKG 181
Query: 196 IEIRIARIFNTYGPR---MNIDDGRVVSN----FIAQ-AI-RGEPLTV------QAPGTQ 240
+ R FN G M +D + + N ++AQ A+ R E L+V A GT
Sbjct: 182 WNAILLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTG 241
Query: 241 TRSFCYVSDMVDGLIRLMEG--ENTGP--INIGNPGEFTMLELAENVKELINPNVEITMV 296
R + +V D+ G I ++ EN G N+G +++L++ + +++ ++ +
Sbjct: 242 IRDYIHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGYSVLQMVQAMEKASGREIKYKIT 301
Query: 297 ENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM-EDDFRLRLAVP 343
D + A LGW K GL M ED +R +L P
Sbjct: 302 GRREGDVAACYANPELAERELGW----KAAFGLDKMCEDLWRWQLQNP 345
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 167 (63.8 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 77/320 (24%), Positives = 127/320 (39%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
S R+ + G G +GS + +L + E+++ ++D L + +
Sbjct: 2 SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91 TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
+DQ+Y A I P I N++ N++ A + ++L +S
Sbjct: 55 ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
+Y P ES G + P Y K L Y+RQ+G + R N
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
YGP N + V+ + A A + V GT R F +V DM I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
ENT P IN+G + T+ ELA+ + +++ + + PD ++ D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGL 329
+T+ +L GW +I L GL
Sbjct: 287 VTRLHQL-GWYHEISLEAGL 305
>UNIPROTKB|P0A5D1 [details] [associations]
symbol:MT0522 "Uncharacterized protein Rv0501/MT0522"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
GO:GO:0005886 GO:GO:0005576 GO:GO:0003824 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BX842573
GO:GO:0044237 KO:K01784 KEGG:mtu:Rv3634c PIR:C70546 PIR:H70745
RefSeq:NP_215050.2 RefSeq:NP_334931.1 RefSeq:YP_006513834.1
ProteinModelPortal:P0A5D1 SMR:P0A5D1 PRIDE:P0A5D1
EnsemblBacteria:EBMYCT00000002993 EnsemblBacteria:EBMYCT00000072795
GeneID:13318375 GeneID:887228 GeneID:923918 KEGG:mtc:MT0522
KEGG:mtu:Rv0501 KEGG:mtv:RVBD_0501 PATRIC:18122858
TubercuList:Rv0501 HOGENOM:HOG000053265 OMA:EVEGYVR
ProtClustDB:CLSK881171 Uniprot:P0A5D1
Length = 376
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 75/261 (28%), Positives = 113/261 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
+LVTG F+G +L +L +N N VI VD SKD LR+ +G R E +R D+ P
Sbjct: 26 VLVTGACRFLGGYLTARLAQNPLINRVIAVDA-IAPSKDMLRR-MG--RAEFVRADIRNP 81
Query: 94 LLI------EVDQIYHLACPA-SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
+ EVD + H A + +P +K + NV+G + + ++ + R++L
Sbjct: 82 FIAKVIRNGEVDTVVHAAAASYAPRSGGSAALKEL--NVMGAMQLFAACQKAPSVRRVVL 139
Query: 145 TSTSEVYG----DPLVHPQDESYWGNVNPIGVRSCYD-EGKRVAETLMFDYHRQHGIEIR 199
STSEVYG DP++ +D S + + D EG L R+ I +
Sbjct: 140 KSTSEVYGSSPHDPVMFTEDSSSRRPFSQGFPKDSLDIEG--YVRALG---RRRPDIAVT 194
Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
I R+ N GP M+ R ++ + I G +Q + D + L R
Sbjct: 195 ILRLANMIGPAMDTTLSRYLAGPLVPTIFGRDARLQ--------LLHEQDALGALERAAM 246
Query: 260 GENTGPINIGNPGEFTMLELA 280
G NIG G ML A
Sbjct: 247 AGKAGTFNIGADG-ILMLSQA 266
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 161 (61.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 15 KPPPT-PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
K PT +P FS+ +LVTGGAG+IGSH +L++ E V +VDN G+
Sbjct: 52 KQSPTFNTPSVFSRHEPGVTHVLVTGGAGYIGSHAALRLLK-ESYRVTIVDNLSRGNLAA 110
Query: 74 LR---KWIGHP-RFELIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIK 122
+R + P R + I D+ + + D + H A A P+K
Sbjct: 111 VRILQELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYH 170
Query: 123 TNVIGTLNMLGLAKRVGARILL-TSTSEVYGDPLVHP-QDESYWGNVNPIGVRSCYDEGK 180
TL +L G + L+ +ST YG+P + P +E+ +NP Y + K
Sbjct: 171 NITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINP------YGKAK 224
Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYG 208
++AE ++ D+ + + + I R FN G
Sbjct: 225 KMAEDIILDFSKNSDMAVMILRYFNVIG 252
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 56/203 (27%), Positives = 90/203 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIV--VDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
+LV+GGAG+IGSH V +L+ + V+V +DN S ++K L H V
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 92 ------EPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
E + E D + H A + P+ N++GT+ +L + + G + +
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKNL 125
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIEIRIA 201
+ +S++ VYG P P E + PI + Y K E + D Y +I +
Sbjct: 126 VFSSSATVYGSPKEVPCTEEF-----PISALNPYGRTKLFIEEICRDVYGSDPEWKIILL 180
Query: 202 RIFNTYG--PRMNI-DDGRVVSN 221
R FN G P +I +D R + N
Sbjct: 181 RYFNPVGAHPSGDIGEDPRGIPN 203
Score = 68 (29.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 238 GTQTRSFCYVSDMVDGLI---RLMEGENTG--PINIGNPGEFTMLELAENVKELINPNVE 292
GT R + +V D+ DG I R +E G N+G ++LE+ + ++ +
Sbjct: 232 GTGVRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIP 291
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRD 327
+ + P D +A L W+ K + +
Sbjct: 292 LVIAGRRPGDAEVVYASTERAESELNWKAKYGIEE 326
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 119 (46.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
Score = 79 (32.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 44/202 (21%), Positives = 85/202 (42%)
Query: 142 ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
++ +S++ VYG+P P DE++ G NP G + E + + + D + + +R
Sbjct: 127 LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIE-EMIRDLCQAD-KTWNAVLLR 184
Query: 200 IARIFNTYGPRMNIDDGRVVSN----FIAQ-AI-RGEPLTV------QAPGTQTRSFCYV 247
+ +D + + N +++Q AI R E L V GT R + +V
Sbjct: 185 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244
Query: 248 SDMVDGLIRLMEG--ENTGP--INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDP 303
D+ G I + E G N+G +++L++ + +++ + +V D
Sbjct: 245 VDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDV 304
Query: 304 RQRKPDITKATELLGWEPKIKL 325
+ + A E LGW + L
Sbjct: 305 AACYANPSLAQEELGWTAALGL 326
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 142 (55.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/201 (29%), Positives = 88/201 (43%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q +MRILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 5 QGSMRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTDTA 52
Query: 90 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T L +V + HLA +F KYN + + NV N+L A VGAR +++
Sbjct: 53 QTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKVVS 111
Query: 146 STSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
S ++ D +P DE+ N P Y KR+ + Y +Q+G
Sbjct: 112 CLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPT 171
Query: 205 NTYGPR--MNIDDGRVVSNFI 223
N +GP NI+DG V+ I
Sbjct: 172 NVFGPHDNFNIEDGHVLPGLI 192
>UNIPROTKB|Q74AV4 [details] [associations]
symbol:wbjB "UDP-N-acetylglucosamine 4,6-dehydratase and
UDP-2-acetamido-2,6-dideoxy-alpha-D-xylo-4-hexulose 5-epimerase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003869 InterPro:IPR013692 Pfam:PF02719
Pfam:PF08485 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009103 GO:GO:0003978
HOGENOM:HOG000257079 RefSeq:NP_953295.1 ProteinModelPortal:Q74AV4
GeneID:2685637 KEGG:gsu:GSU2246 PATRIC:22027345 OMA:INAMGLS
ProtClustDB:CLSK870330 BioCyc:GSUL243231:GH27-2226-MONOMER
Uniprot:Q74AV4
Length = 336
Score = 106 (42.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/127 (23%), Positives = 64/127 (50%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL----IR 87
N +L+TGG G G+ ++ + ++ +EV + +D +R + + R + +R
Sbjct: 4 NKVLLITGGTGSFGNAVLKRFLDTRISEVRIFSRDEKKQED-MRIALNNDRLKFYIGDVR 62
Query: 88 -HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG--LAKRVGARILL 144
+D + + VD ++H A ++ P++ ++TN++G N+L +A V I+L
Sbjct: 63 DYDSLDSAMKGVDYVFHAAALKQVPSCEFYPMEAVRTNILGAENVLNASIANHVKKVIVL 122
Query: 145 TSTSEVY 151
++ VY
Sbjct: 123 STDKAVY 129
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT 239
K + E LM R I R YG M G V+ F+ Q G+ LT+ P
Sbjct: 138 KAMMEKLMVAKSRTTDIT-RTVLCATRYGNVM-ASRGSVIPLFVQQIKEGKSLTLTDPN- 194
Query: 240 QTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMV 296
TR + D VD ++ N+G I + T+ +LA+ +KEL + EI ++
Sbjct: 195 MTRFLMSLEDSVDLVLYAFAHANSGDILVQKSPASTIRDLAQALKELFSAGNEIKII 251
>TIGR_CMR|GSU_2246 [details] [associations]
symbol:GSU_2246 "polysaccharide biosynthesis domain
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003869 InterPro:IPR013692 Pfam:PF02719
Pfam:PF08485 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009103 GO:GO:0003978
HOGENOM:HOG000257079 RefSeq:NP_953295.1 ProteinModelPortal:Q74AV4
GeneID:2685637 KEGG:gsu:GSU2246 PATRIC:22027345 OMA:INAMGLS
ProtClustDB:CLSK870330 BioCyc:GSUL243231:GH27-2226-MONOMER
Uniprot:Q74AV4
Length = 336
Score = 106 (42.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/127 (23%), Positives = 64/127 (50%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL----IR 87
N +L+TGG G G+ ++ + ++ +EV + +D +R + + R + +R
Sbjct: 4 NKVLLITGGTGSFGNAVLKRFLDTRISEVRIFSRDEKKQED-MRIALNNDRLKFYIGDVR 62
Query: 88 -HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG--LAKRVGARILL 144
+D + + VD ++H A ++ P++ ++TN++G N+L +A V I+L
Sbjct: 63 DYDSLDSAMKGVDYVFHAAALKQVPSCEFYPMEAVRTNILGAENVLNASIANHVKKVIVL 122
Query: 145 TSTSEVY 151
++ VY
Sbjct: 123 STDKAVY 129
Score = 92 (37.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 34/117 (29%), Positives = 51/117 (43%)
Query: 180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT 239
K + E LM R I R YG M G V+ F+ Q G+ LT+ P
Sbjct: 138 KAMMEKLMVAKSRTTDIT-RTVLCATRYGNVM-ASRGSVIPLFVQQIKEGKSLTLTDPN- 194
Query: 240 QTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMV 296
TR + D VD ++ N+G I + T+ +LA+ +KEL + EI ++
Sbjct: 195 MTRFLMSLEDSVDLVLYAFAHANSGDILVQKSPASTIRDLAQALKELFSAGNEIKII 251
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 55/198 (27%), Positives = 95/198 (47%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIG-HPRFELIRH 88
MR+LVTGG+G+IGSH +L+++ ++V+++DN + L + G P F +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSG-HDVVILDNLCNSKRSVLPVIERLSGKQPTF--VEG 57
Query: 89 DV-TEPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
D+ E L+ E+ + + H A + P++ NV GTL ++ + +
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
+ +S++ VYGD P ES+ P G +S Y + K + E ++ D + Q I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPEWSI 172
Query: 199 RIARIFNTYGPRMNIDDG 216
+ R FN G + D G
Sbjct: 173 ALLRYFNPVGAHPSGDMG 190
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 70/293 (23%), Positives = 120/293 (40%)
Query: 48 LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP 107
++D L N K V+ V +G + + G R E + ++ IE + H A
Sbjct: 29 ILDNLC-NSKRSVLPVIERLSGKQPTFVE--GDIRNEALMTEILHDHAIET--VIHFAGL 83
Query: 108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLVHPQDESYWGN 166
+ P++ NV GTL ++ + + + +S++ VYGD P ES+
Sbjct: 84 KAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF-PT 142
Query: 167 VNPIGVRSCYDEGKRVAETLMFDYHR-QHGIEIRIARIFNTYGPRMNIDDGR----VVSN 221
P +S Y + K + E ++ D + Q I + R FN G + D G + +N
Sbjct: 143 GTP---QSPYGKSKLMVEQILTDLQKAQPEWSIALLRYFNPVGAHPSGDMGEDPQGIPNN 199
Query: 222 ---FIAQ-AI-RGEPLTV----QAP--GTQTRSFCYVSDMVDGLIRLMEGENTGP-INIG 269
+IAQ A+ R + L + P T R + +V D+ DG + M+ P ++I
Sbjct: 200 LIPYIAQVAVGRRDSLAIFGNDYPPEDATAVRDYIHVMDLADGHVAAMQQLADKPGVHIY 259
Query: 270 NPGE---FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGW 319
N G ++L++ + V+ D D TKA + L W
Sbjct: 260 NLGAGIGSSVLDVVNAFSKACGKPVKYHFAPRRDGDLPAYWADATKADKELNW 312
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 121 (47.7 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 46/153 (30%), Positives = 78/153 (50%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---SKDNLRKWIGHPR-----FEL- 85
ILVTGGAGFIG+H V +L++ + +V ++DN+ + D +R+ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLLK-DGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLG 67
Query: 86 -IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+R+ D+ E L + D + H A + NP + N++GT+N+ +
Sbjct: 68 DLRNKGDI-EKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 141 RILLTSTSE-VYGDPLVHPQDESY-WGNVNPIG 171
++++ S+S VYG P P E + +NP G
Sbjct: 127 KMMVFSSSATVYGQPEKIPCMEDFELKAMNPYG 159
Score = 61 (26.5 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 21/91 (23%), Positives = 36/91 (39%)
Query: 238 GTQTRSFCYVSDMVDGLI----RLMEGENTG--PINIGNPGEFTMLELAENVKELINPNV 291
G+ R + +V D+ DG I +L G N+G ++LE+ ++ +
Sbjct: 236 GSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKI 295
Query: 292 EITMVENTPDDPRQRKPDITKATELLGWEPK 322
I + D KA + LGW+ K
Sbjct: 296 PIKLCPRRSGDATAVYASTEKAEKELGWKAK 326
Score = 48 (22.0 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 168 NPIGVR---SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFI 223
NP+G S ++ K + LM Y +Q + R+ + N YG +DG V ++I
Sbjct: 188 NPVGAHESGSIGEDPKGIPNNLM-PYIQQVAVG-RLPEL-NVYGHDYPTEDGSAVRDYI 243
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 127 (49.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 58/201 (28%), Positives = 95/201 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIGHP-----RFEL- 85
ILVTGGAGFIG+H V +L+ N+ +V ++DN + +R+ +G F L
Sbjct: 9 ILVTGGAGFIGTHTVVQLL-NQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNLG 67
Query: 86 -IRH--DVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
+R+ D+ E L D + H A + NP + N++GT+N+ +
Sbjct: 68 DLRNKGDI-EKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNC 126
Query: 141 RILLTSTSE-VYGDPLVHPQDESY-WGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIE 197
++++ S+S VYG P + P E + +NP G R+ K E + D H + +
Sbjct: 127 KMMVFSSSATVYGQPEIVPCVEDFELQAMNPYG-RT-----KLFLEEIARDIHAAEPEWK 180
Query: 198 IRIARIFNTYGPRMNIDDGRV 218
I + R FN G + GR+
Sbjct: 181 IILLRYFNPVGAH---ESGRI 198
Score = 67 (28.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 21/91 (23%), Positives = 37/91 (40%)
Query: 238 GTQTRSFCYVSDMVDG----LIRLMEGENTG--PINIGNPGEFTMLELAENVKELINPNV 291
G+ R + +V D+ DG L +L G N+G ++LE+ + ++ +
Sbjct: 236 GSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKI 295
Query: 292 EITMVENTPDDPRQRKPDITKATELLGWEPK 322
I + D KA + LGW+ K
Sbjct: 296 PIKLCPRRAGDATAVYASTQKAEKELGWKAK 326
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 151 (58.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 64/267 (23%), Positives = 113/267 (42%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
S +LVTGG+G +G + + E +K+ + V + S +L+ R E R
Sbjct: 6 SKRTVLVTGGSGLVGKGIEKYVKETDKSNDVWV--FMRSSDCDLKS-----R-ESTRSYF 57
Query: 91 TEPLLIEVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
+ I+ + HLA +F KY V+ + N+ N+L K ++ S
Sbjct: 58 EK---IKPTHVIHLAARVGGLFSNMKYK-VEFFRENIDINDNVLACCKEFNVVKCVSCLS 113
Query: 149 E-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
++ D +P DE+ N P Y KR+ + L Y+ ++G + N Y
Sbjct: 114 TCIFPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIY 173
Query: 208 GPRMN--IDDGRVVSNFIAQ---AIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG- 260
GP N + DG V+ I + A++ + LT+ G R F Y D+ + +
Sbjct: 174 GPHDNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNY 233
Query: 261 ENTGPI--NIGNPGEFTMLELAENVKE 285
E P+ ++G E ++ ++A + E
Sbjct: 234 EEMSPLILSVGEEDEISIADVARLITE 260
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 132 (51.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 46/169 (27%), Positives = 80/169 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRHDV 90
+L+TGG G+IGS L+EN+ +V++VDN + S D + G P F + D+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDY-DVVIVDNLYNSSAVAIDRIELICGKRPAFHNV--DI 62
Query: 91 TEPLLI--------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGAR 141
T+ + E+D + H A + P++ + NV G++++L + K
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
I+ +S++ VYGD P + PIG + Y K E ++ D+
Sbjct: 123 IVFSSSATVYGDATRVPNMIPIPEHC-PIGPTNTYGRTKSTIEDVISDH 170
Score = 61 (26.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 18/95 (18%), Positives = 42/95 (44%)
Query: 238 GTQTRSFCYVSDMVDGLIRLME--GENTGPI---NIGNPGEFTMLELAENVKELINPNVE 292
GT R + +V D+ G + + +N + N+G+ T+ E+ + ++ ++
Sbjct: 245 GTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDLP 304
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRD 327
+V D + A + LGW+ ++++ D
Sbjct: 305 YEVVPRRQGDVLDLTANPALANKELGWKTELRMED 339
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 112 (44.5 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 55/202 (27%), Positives = 93/202 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSK--DNLRKW--IGHPRFELI 86
+LVTGGAG+IGSH V +++ N VI VDN Y +G+K + L + I +
Sbjct: 6 VLVTGGAGYIGSHTVLEML-NAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 87 RHDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRV 138
R D+T+ + ++D + H A + P++ N+ GT +L +A
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIE 197
+ + +S++ VYG+P P E + P G S Y + K E ++ D +
Sbjct: 125 VFKFVYSSSATVYGEPKFLPVTEEH-----PTGNCTSPYGKTKYFTEEILKDLCKSDKRW 179
Query: 198 IRIA-RIFNTYGPRMNIDDGRV 218
++ R FN G ++ GR+
Sbjct: 180 AVVSLRYFNPVGAHIS---GRI 198
Score = 80 (33.2 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 26/107 (24%), Positives = 49/107 (45%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEG----ENTG--PINIGNPGEFTMLELAENVKELINPNV 291
GT R + ++ D+ +G ++ ++ TG N+G +++L++ + ++ V
Sbjct: 236 GTGVRDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKV 295
Query: 292 EITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM-EDDFR 337
T+V+ D D T A + LGW K G+ M ED +R
Sbjct: 296 NYTLVDRRSGDVATCYADATLADKKLGW----KAERGIDKMCEDTWR 338
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 148 (57.2 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY-FTGSKDNLRKWIGHPR--FELIRHDV 90
ILVTGG G +GS + K++E EK + + + F GSKD + + R FE ++
Sbjct: 4 ILVTGGTGLVGS-AIKKVVETTEKRDD---EKWVFIGSKDCDLENLEETRELFESVKPTH 59
Query: 91 TEPLLIEVDQIYH-LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
L V ++H LA F++ N I NV+ + + K V ST
Sbjct: 60 VIHLAAMVGGLFHNLAHNLQ--FFRKN--MAINDNVLALCHEFDVIKCVSC----LSTC- 110
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
++ D +P DE+ P Y KR+ + L Y ++HG + N +GP
Sbjct: 111 IFPDKTSYPIDETMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGP 170
Query: 210 R--MNIDDGRVVSNFIAQAI---R-GEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGEN 262
N+ G V+ I +A R G PL V GT R F Y D+ IR++ E E+
Sbjct: 171 HDNYNLQSGHVLPALIHKAYVAQRDGTPLQVYGSGTPLRQFIYSIDLARLFIRVVREYED 230
Query: 263 TGPI--NIGNPGEFTMLELAENVKELIN 288
PI ++ E ++ + V + I+
Sbjct: 231 VEPIILSVNESDEVSIRDAVSAVVKAID 258
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 63/199 (31%), Positives = 96/199 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 149 EVYGDPLV--HPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
EV G P V HP Y GN + P R Y K +AE L+ + + + G+ R+
Sbjct: 131 EVVG-PNVKGHP---FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFG-GRL 185
Query: 204 FNTYGPRMNIDDGRV-VSN 221
F P +++ GRV V N
Sbjct: 186 FRAI-PA-SVEHGRVYVGN 202
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 63/199 (31%), Positives = 96/199 (48%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQI-YHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
+ H+ + +F K +P K NV GT N++ + G R+L+ TS+
Sbjct: 71 HEVAAAMAGSHVVIHTAGLVDVFGKASPETIHKVNVQGTQNVIDACVQTGTRLLVYTSSM 130
Query: 149 EVYGDPLV--HPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
EV G P V HP Y GN + P R Y K +AE L+ + + + G+ R+
Sbjct: 131 EVVG-PNVKGHP---FYRGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLRFG-GRL 185
Query: 204 FNTYGPRMNIDDGRV-VSN 221
F P +++ GRV V N
Sbjct: 186 FRAI-PA-SVEHGRVYVGN 202
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 72/322 (22%), Positives = 132/322 (40%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q + I VTG G GS ++ +L + + +I T + L FE ++
Sbjct: 2 QKDAPIFVTGHRGLAGSAILRRLKKQGYSSLI------TRTHQELDLTNKEKVFEFFANN 55
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
E + + ++ + +PV I+ N+ N++ + R R+L +S
Sbjct: 56 CPEYVFLAAARVGGINDS------NLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSS 109
Query: 149 EVYGDPLVHPQDESYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
+Y + P E Y+ G + P Y K + Y+RQ+ + A N
Sbjct: 110 CIYSNDAPRPLKEIYFNSGKLEP--TNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNL 167
Query: 207 YGPRMNID--DGRVVSNFIAQAIRGE----P-LTVQAPGTQTRSFCYVSDMVDGLIRLME 259
+GP N D +G VV++ I++ + + P + G R F Y D+ + LM
Sbjct: 168 FGPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMN 227
Query: 260 ----------GENTGP--INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
G++ P +NIG+ E ++ ELA ++++I +I + PD +
Sbjct: 228 LPDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKV 287
Query: 308 PDITKATELLGWEPKIKLRDGL 329
D++ + LGW + L G+
Sbjct: 288 MDVS-LMQYLGWSAREGLVSGI 308
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 84/323 (26%), Positives = 134/323 (41%)
Query: 34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRH-- 88
R L+TG G GS+L + L+ E + +I + F S+ D+L P L H
Sbjct: 3 RALITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYG 62
Query: 89 ---DVTE--PLL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAK--RV 138
D T LL IE D++Y+LA S + ++ PV T T +G++ +L + RV
Sbjct: 63 DLIDGTRLVTLLSTIEPDEVYNLAAQ-SHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRV 121
Query: 139 GARILLTSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
R S+SE++G P PQ+E + P RS Y K + +Y +G+
Sbjct: 122 HCRFYQASSSEMFGASP--PPQNE-----LTPFYPRSPYGAAKVYSYWATRNYREAYGLF 174
Query: 198 IRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDGLI 255
+FN PR R ++ +A+ G V R + Y + V+G+
Sbjct: 175 AVNGILFNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMW 234
Query: 256 RLMEGENTGPINIGNPGEFTMLELAENVKELINPN----VEITMVENTPDDPRQRKPDIT 311
R+++ + + FT+ E A E + V+ P + D T
Sbjct: 235 RMLQTDEPDDFVLATGRGFTVREFARAAFEHAGLDWQQYVKFDQRYLRPTEVDSLIGDAT 294
Query: 312 KATELLGWEPKIKLRDGLPLMED 334
KA ELLGW + + +M D
Sbjct: 295 KAAELLGWRASVHTDELARIMVD 317
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 142 (55.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 55/218 (25%), Positives = 91/218 (41%)
Query: 101 IYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE-VYGDPLVHP 158
+ HLA +F + + N+ N+L A G + +++ S ++ D +P
Sbjct: 5 VIHLAAMVGGLFKNIRCNLDFWRRNIHINDNVLHSAYECGVQKVVSCLSTCIFPDKTTYP 64
Query: 159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR--MNIDDG 216
DE+ N P Y KR+ + Y QHG N +GP NI+DG
Sbjct: 65 IDETMIHNGPPHSSNFGYSYAKRMIDVQNRGYFEQHGCRFTAVIPTNVFGPHDNFNIEDG 124
Query: 217 RVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGENTGPI--NIG 269
V+ I + G LTV G R F Y D+ + ++ E E PI ++G
Sbjct: 125 HVLPGLIHKVYLAKQNGSALTVWGTGKPRRQFIYSLDLARLFVWVLREYEEVEPIILSVG 184
Query: 270 NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
E ++ E AE + E ++ E+ + + T D + +K
Sbjct: 185 EEDEVSIREAAEAIVEAMDFRGEL-IFDTTKADGQFKK 221
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 142 (55.0 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 70/267 (26%), Positives = 114/267 (42%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPR--FELIRHD 89
MR+LVTGG+G +G +++++++E E + F SKD NL R F+ R
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKDEGREG--EEWTFLSSKDANLLS-AEETRAIFQKYRPT 63
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 64 HVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC- 115
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
++ D +P DE+ N P Y KR+ + +Q+G N +G
Sbjct: 116 IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFGA 175
Query: 210 R--MNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGEN 262
NIDDG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 176 HDNFNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDE 235
Query: 263 TGPI--NIGNPGEFTMLELAENVKELI 287
PI ++G E ++ + A+ V + +
Sbjct: 236 VDPIILSVGEEDELSIKDCADAVVDAL 262
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 141 (54.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 70/273 (25%), Positives = 116/273 (42%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPR--FELIRHD 89
MR+LVTGG+G +G ++++++ E E + F SK+ NL R FE R
Sbjct: 8 MRVLVTGGSGLVG-RAIERVVKEEGREG--EEWTFLSSKEANLLS-AKETRAIFEKYRPT 63
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 64 HVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC- 115
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
++ D +P DE+ N P Y KR+ + +Q+G N +G
Sbjct: 116 IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFGA 175
Query: 210 R--MNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGEN 262
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 176 HDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDE 235
Query: 263 TGPI--NIGNPGEFTMLELAENVKELINPNVEI 293
PI ++G E ++ + A+ V + + N ++
Sbjct: 236 VDPIILSVGEEDELSIKDCADAVVDALGFNGDV 268
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 140 (54.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 86/319 (26%), Positives = 133/319 (41%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TG GF+G +++ +L+ + +G++ +LR H R +L
Sbjct: 5 RILITGANGFVGGYMIRELVAAGYQHSELHTLTVSGAEQSLRIGQAH-RCDLRDSASIHR 63
Query: 94 LLIEVDQ--IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLG---LAKRVGARILLTSTS 148
LL EV I HLA A P K +P N + LG LA A ++ +S
Sbjct: 64 LLQEVQPTGIVHLAAIALPSQAKADPSAAWAVN-FEAVRQLGEAVLACSPHAVLVFAGSS 122
Query: 149 EVYGDPLVHPQDESYWGNVNP-IGVRSC--YDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
E YG + G VN +R Y K A+ + R G+ R FN
Sbjct: 123 ESYGASF-----NTVAGAVNEGTALRPLTPYAATKAAADVALGQM-RNDGLNAVRFRAFN 176
Query: 206 TYGPRMNIDDGRVVSNF---IAQAIRGE-PLTVQAPGTQT-RSFCYVSDMVDGLIRLMEG 260
GP + D VV++F IAQ I G+ P ++ R F V D+V G +E
Sbjct: 177 HTGPGQSPD--YVVASFAAQIAQIIAGDHPPVIRVGNLDAMRDFVDVRDVVRGYRLALET 234
Query: 261 ENTGPINIGNPGEFTMLE-LAENVKELINPNVEITMVENTPD-DPRQ-RKPDI------- 310
E P++ G F + +++ ++N ++I V+ + DP + RK D+
Sbjct: 235 E-LDPVS---EGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRKNDVPRTWGDA 290
Query: 311 TKATELLGWEPKIKLRDGL 329
+A LGW P + L
Sbjct: 291 NRARTELGWVPYLAFEQTL 309
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 145 (56.1 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 57/191 (29%), Positives = 95/191 (49%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WI--GH-PRFEL 85
SN ILVTGGAG+IGSH V +L+ N +V++VDN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 86 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVN--PIGVRSCYDEGKRVAETLMFD-YHRQHGIE 197
I+ +S++ VYGD + D S P+ + Y K + E+++ D Y+ +
Sbjct: 121 TIVFSSSATVYGD-VTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWK 179
Query: 198 IRIARIFNTYG 208
+ I R FN G
Sbjct: 180 VAILRYFNPIG 190
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 145 (56.1 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 57/191 (29%), Positives = 95/191 (49%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WI--GH-PRFEL 85
SN ILVTGGAG+IGSH V +L+ N +V++VDN S D + + +I H P +++
Sbjct: 2 SNEYILVTGGAGYIGSHTVIELISNGY-KVVIVDNLSNSSYDAVARIEFIVKQHVPFYDV 60
Query: 86 -IR-HDVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
IR ++ + ++ + H A + P+ NV GT+N+L + K +
Sbjct: 61 DIRNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK 120
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVN--PIGVRSCYDEGKRVAETLMFD-YHRQHGIE 197
I+ +S++ VYGD + D S P+ + Y K + E+++ D Y+ +
Sbjct: 121 TIVFSSSATVYGD-VTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWK 179
Query: 198 IRIARIFNTYG 208
+ I R FN G
Sbjct: 180 VAILRYFNPIG 190
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 69/273 (25%), Positives = 116/273 (42%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPR--FELIRHD 89
MR+LVTGG+G +G ++++++ E + F SK+ NL R FE R
Sbjct: 42 MRVLVTGGSGLVG-RAIERVVKEEGRGG--EEWTFLSSKEANLLS-AKETRAIFEKYRPT 97
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
L V ++ + F++ N I NV+ T N G+ K V ST
Sbjct: 98 HVIHLAAMVGGLFR-NMRQNLDFWRNNVF--INDNVLQTANEFGVVKVVSC----LSTC- 149
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
++ D +P DE+ N P Y KR+ + +Q+G + N +G
Sbjct: 150 IFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGA 209
Query: 210 R--MNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGEN 262
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 210 HDNFNIEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDE 269
Query: 263 TGPI--NIGNPGEFTMLELAENVKELINPNVEI 293
PI ++G E ++ + A+ V + + N ++
Sbjct: 270 VDPIILSVGEEDELSIKDCADAVVDALGFNGDV 302
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 124 (48.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 54/167 (32%), Positives = 80/167 (47%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 147 TSEVYG-DPLVHPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFD 189
+ EV G + HP Y GN + P R Y K +AE L+ +
Sbjct: 129 SMEVVGPNTKGHP---FYRGNEDTPYEAVHRHPYPCSKALAEWLVLE 172
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 118 (46.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 45/166 (27%), Positives = 72/166 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVTE 92
+LVTGG G+IGS L+E +V+V DN + S + L + I + E + DVT+
Sbjct: 6 VLVTGGTGYIGSFTTLALLE-AGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDVTD 64
Query: 93 PLLIE--------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGARIL 143
+ +D + H A + P+ NV GT+ +L + + I+
Sbjct: 65 EAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTNIV 124
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
+S++ VYGD P D P+G + Y K E + D
Sbjct: 125 FSSSATVYGDATRFP-DMIPIPEHCPLGPTNPYGNTKFAIELAITD 169
Score = 60 (26.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 18/88 (20%), Positives = 36/88 (40%)
Query: 238 GTQTRSFCYVSDMVDGLIRLME---GENTG--PINIGNPGEFTMLELAENVKELINPNVE 292
GT R + ++ D+ DG ++ + N G N+G T+ E+ + + ++
Sbjct: 247 GTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVGRDLP 306
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWE 320
+ D + T+A LGW+
Sbjct: 307 YEVAPRRAGDVLNLTSNPTRANTELGWK 334
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 82/322 (25%), Positives = 133/322 (41%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVI-------VVDN-YFTGSKDNLRKWIGHPRFELIR 87
L+TG G +GS + D L+ N EVI +DN Y + N + I +L
Sbjct: 6 LITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKKDRISIFYADLND 65
Query: 88 HDVTEPLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR---- 141
+ + L D I+HLA + P P++T++TN+IGT N+L + + A+
Sbjct: 66 YSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKDGYD 125
Query: 142 --ILLTSTSEVYGDPLVH---PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
+ + S+SEVYG V +D ++ G +P Y K + L Y + I
Sbjct: 126 PVVHVCSSSEVYGRAKVGIKLNEDTTFHG-ASP------YSISKIGTDYLGRFYGEAYNI 178
Query: 197 EIRIARIFNTYGPRMN-IDDGRVVSNFIAQAIRG--EPLTVQAPGTQTRSFCYVSDMVDG 253
+ R+ GPR + + V+ IA G EP+ + R+F D +
Sbjct: 179 RTFVTRMGTHSGPRRSDVFFESTVAKQIALIETGYQEPVIKVGNLSSVRTFQDARDAIRA 238
Query: 254 --LIRLMEGENTGP----INIGNPGEFTMLELAENVKEL-INPNVEITMVENT--PDDPR 304
L+ L + P NI F + E+ E + +++I E P D
Sbjct: 239 YYLLSLESQKGKVPCGEAFNIAGEEAFKLPEVIEILLSFSTRKDIKIEQDEERLRPIDAD 298
Query: 305 QRKPDITKATELLGWEPKIKLR 326
+ D TK + W+P+I R
Sbjct: 299 YQMFDNTKIKSFINWKPEIAAR 320
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 116 (45.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 58/227 (25%), Positives = 93/227 (40%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDN--LRKWIGHPRFELIRHD 89
+VTGG GF HLV+ L+ E V + D + N L + + R + I D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISAD 72
Query: 90 VTEPL-LIEVDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ + +++ Q ++H+A P S I N NV GT N++ VG R++
Sbjct: 73 LRDKSQVVKAFQGAEVVFHMAAPDSSI---NNHQLQYSVNVQGTQNVIDACVDVGVKRLI 129
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
TS+ V D VH PI Y K E L+ + ++G+ R
Sbjct: 130 YTSSPSVVFDG-VHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCIRP 188
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ +GP D +V + +A A G+ + G F YV ++
Sbjct: 189 SSIFGP----GDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENV 231
Score = 66 (28.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVK---ELINPNVEITMVENTPDD 302
++S ++DGL G I I P F M+ +A V+ +++ P +T+ + TP
Sbjct: 270 FMSQLLDGL-----GYERPSIKI--PA-FIMMPIAHLVELTYKVLGP-YGMTVPQLTPSR 320
Query: 303 PR----QRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
R R D TKA + LG+ P + L++G+ D F
Sbjct: 321 VRLLSCSRTFDSTKAKDRLGYAPVVPLQEGIRRTIDSF 358
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 63/278 (22%), Positives = 120/278 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLME-----NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
M ILVTG AGF+G L+ L+E + ++ + +D ++ + PR ++
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQG-LDDPRVQVKG 59
Query: 88 HDVTEPLLIE--VDQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA- 140
D+T+P ++ +D I+HLA S + ++ N T +L A+++G
Sbjct: 60 GDITDPQVLANLIDANTQGIFHLAAVVSSQAESDFDLG-MRVNFSATQGLLERARQLGTC 118
Query: 141 -RILLTSTSEVYGDPLVHPQ-DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HG 195
+ ++TS+ V+G L D+ W +P +S Y K + + L+ DY R+ G
Sbjct: 119 PKWVMTSSVAVFGGQLPDTVGDDQVW---SP---QSSYGTQKAMNDLLLADYSRRGFVDG 172
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+R+ I G + N+ S I + + G+ P TR ++ +
Sbjct: 173 RSLRMPTIVVRPG-KPNLAASSFASGIIREPLNGQASVCPVP-LNTR--LWLMSPAQAIA 228
Query: 256 RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEI 293
L+ G + M L++ V+++I+ E+
Sbjct: 229 NLVHGHELAAERLNQGRVINMPGLSQTVEQMIDALREV 266
>ZFIN|ZDB-GENE-030131-5673 [details] [associations]
symbol:hsd3b7 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase" species:7955
"Danio rerio" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-030131-5673 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0016853 EMBL:BC045457 IPI:IPI00489625
RefSeq:NP_956103.1 UniGene:Dr.32972 ProteinModelPortal:Q7ZVQ1
STRING:Q7ZVQ1 GeneID:327462 KEGG:dre:327462 InParanoid:Q7ZVQ1
NextBio:20810040 ArrayExpress:Q7ZVQ1 Uniprot:Q7ZVQ1
Length = 368
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 51/173 (29%), Positives = 85/173 (49%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVD-NYFTGSKDNLRKWIGHPRFELI 86
+S + ++TGG GF+G HL+ L+E +KN E+ + D N F + + + + +I
Sbjct: 6 KSKLTYVITGGCGFLGQHLLRVLLEKKKNVKEIRLFDKNVFPSLQSESTEDV---KVVII 62
Query: 87 RHDVTE-----PLLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGA 140
+ D+T+ + D ++H A ++YK P K I NV GT N + +G
Sbjct: 63 QGDITKYEDVRNAFLGADLVFHAASLVD-VWYKI-PEKVIFAVNVQGTENAIKACVEIGI 120
Query: 141 RILL-TSTSEVYGDPLVHPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFD 189
+ L+ TS+ EV G P V DE GN + P + Y + K AE ++ +
Sbjct: 121 QYLVYTSSMEVVG-PNVKG-DEFVRGNEDTPYNIFHEMPYPKSKAAAEKIVLE 171
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 119 (46.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 56/192 (29%), Positives = 88/192 (45%)
Query: 34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRH-- 88
R L+TG +G GS+L + L+ E + VI + F TG D+L + P L H
Sbjct: 3 RALITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYG 62
Query: 89 DVTEP-----LLIEV--DQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG- 139
D+ + +L EV D+IY+L S + ++ P T + + +GT+ +L + G
Sbjct: 63 DLNDASSINRVLREVRPDEIYNLGAQ-SHVRVSFDVPEYTGEIDALGTVRLLEGIRETGL 121
Query: 140 -ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
R S+SE+YG + PQ E+ P RS Y K A + +Y +G+
Sbjct: 122 NTRFYQASSSELYGKVVETPQKET-----TPFYPRSPYACAKAYAYYITVNYRESYGMYA 176
Query: 199 RIARIFNTYGPR 210
+FN PR
Sbjct: 177 CNGILFNHESPR 188
Score = 55 (24.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 309 DITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
D KA LGW+P++ + GL M D L LA K
Sbjct: 310 DPAKARRQLGWQPRVDFQ-GLVDMMTDADLALAEREK 345
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 138 (53.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/186 (27%), Positives = 87/186 (46%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGH--PRFE--LIR 87
+LVTGGAG+IGSH V +L+EN + +V DN + D++ + H P +E L
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72
Query: 88 HDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
E + E +D + H A + P++ N++GT+ +L L ++ ++ +
Sbjct: 73 RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 132
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIEIRIAR 202
+S++ VYGD P P+G + Y K E ++ D + + + I R
Sbjct: 133 SSSATVYGDATRFPNMIPIPEEC-PLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 191
Query: 203 IFNTYG 208
FN G
Sbjct: 192 YFNPIG 197
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 134 (52.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 76/314 (24%), Positives = 132/314 (42%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTE 92
R+LVTGGAGF+G++LV L++ ++ S D + HP+ E+++ D+T+
Sbjct: 16 RVLVTGGAGFVGANLVTTLLDR---------GHWVRSFDRAPSLLPAHPQLEVLQGDITD 66
Query: 93 P----LLIE-VDQIYHLAC-----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R 141
++ +D I+H A + + +Y ++ NV GT N+L +R G R
Sbjct: 67 ADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQ-RSFAVNVGGTENLLHAGQRAGVQR 125
Query: 142 ILLTST-SEVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
+ TS+ S V G + DE+ Y N + Y E K VAE + Q+G++
Sbjct: 126 FVYTSSNSVVMGGQNIAGGDETLPYTDRFNDL-----YTETKVVAERFVL---AQNGVDG 177
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
+ G N D + ++G + + YV +++ G I +
Sbjct: 178 MLTCAIRPSGIWGN-GDQTMFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFI--L 234
Query: 259 EGENTGPINIGNPGEFTMLELAE--NVKELINPNVEITMVENTPDDPRQRKPDITKATEL 316
+ P PG+ + AE N+ E P +E + P R P + +
Sbjct: 235 AAAHLVPDGTA-PGQAYFINDAEPINMFEFARPVLE-ACGQRWPK-MRISGPAVRWV--M 289
Query: 317 LGWEPKIKLRDGLP 330
GW+ ++ R G P
Sbjct: 290 TGWQ-RLHFRFGFP 302
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 132 (51.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 65/267 (24%), Positives = 109/267 (40%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVT 91
MR+LVTGG+G +G + + E E E + F SKD NL + +H T
Sbjct: 5 MRVLVTGGSGLVGRAIERVVKEGEGREG--EEWIFLSSKDANLLS-PEETKAVFEKHRPT 61
Query: 92 EPLLIEVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
+ HLA +F + ++NV N+L A G +++ ++
Sbjct: 62 H--------VIHLAAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTC 113
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG- 208
++ D +P DE+ N P Y KR+ + + +Q N +G
Sbjct: 114 IFPDKTTYPIDETMIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGC 173
Query: 209 -PRMNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM-EGEN 262
NI+DG V+ I + G+PL V G R F Y D+ + ++ E +
Sbjct: 174 HDNFNIEDGHVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDE 233
Query: 263 TGPI--NIGNPGEFTMLELAENVKELI 287
PI ++G E ++ + A+ V E +
Sbjct: 234 VEPIILSVGEEDELSIKDAADAVVEAL 260
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 133 (51.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 67/230 (29%), Positives = 106/230 (46%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L+E E E+ V D + + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKA--GPVQVTAIQGDVTQA 70
Query: 94 LLIEVDQ-----IYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F K +P KTI K NV GT N++ + G + L+ TS
Sbjct: 71 HEVAAAMSGSHVVIHTAGLVD-VFGKASP-KTIHKVNVQGTQNVIDACVQTGTQYLVYTS 128
Query: 147 TSEVYGDPLV-HPQDESYWGNVN-PI-GVRSC-YDEGKRVAETLMFDYHRQHGIEIRIAR 202
+ EV G + HP Y GN + P V S Y K +AE L+ + + + + +
Sbjct: 129 SMEVVGPNIKGHP---FYRGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRK-VNGGLPL 184
Query: 203 IFNTYGPRMNIDDG-RVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDM 250
+ P +G +V+ +F Q +R G L P + YV ++
Sbjct: 185 VTCALRPTGIYGEGHQVMRDFYYQGLRFGGRLFRAVPASVEHGRVYVGNV 234
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 128 (50.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 49/155 (31%), Positives = 75/155 (48%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT--- 91
+LVTGGAG+IGSH L+E + +V++VDN + + + ++I H V
Sbjct: 9 VLVTGGAGYIGSHTCVVLLE-KGYDVVIVDNLCNSRVEAVHRIEKLTGKKVIFHQVDLLD 67
Query: 92 EPLLIEV--DQ----IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILL 144
EP L +V +Q + H A + P+ K N+ GT+N++ K+ R +
Sbjct: 68 EPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVF 127
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG 179
+S++ VYGDP P G PI SC EG
Sbjct: 128 SSSATVYGDP-TRP------GGTIPIP-ESCPREG 154
Score = 44 (20.5 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 15/88 (17%), Positives = 36/88 (40%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEG-----ENTGPINIGNPGEFTMLELAENVKELINPNVE 292
GT R + +V D+ + + ++ + P N+G+ T+ ++ + + ++
Sbjct: 236 GTPIRDYIHVCDLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVGRDLP 295
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWE 320
+ D + T+A E L W+
Sbjct: 296 YKVTPRRAGDVVNLTANPTRANEELKWK 323
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 132 (51.5 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 78/300 (26%), Positives = 129/300 (43%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGHPRFELIRHD 89
M++LVTGG GF+G L +L +N EV T K N K++ P + R
Sbjct: 1 MKMLVTGGTGFLGQKLAFRL-KNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLED--RER 57
Query: 90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
V + + + D I+H +SP + KY NV+GT +++ +++ G R++ ST
Sbjct: 58 VLQ-VCKDKDYIFHSGAHSSP-WGKYEDF--YNANVLGTKHIIEGSQKYGIKRLIHVSTP 113
Query: 149 EVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
+Y + + ++ N P + Y K +AE + D HG+ + R +
Sbjct: 114 SIY---FYYDERQNVVENAKLPDTFVNHYATTKYMAEQAI-DQAFAHGLPVITIRPRALF 169
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR--SFCYVSDMVDGLIRLMEG-ENT- 263
GP D ++ I +G + GT+ YV ++VD L+ M ++T
Sbjct: 170 GP----GDNAILPRLIKVCEKG---ALPRIGTENVLVDITYVENVVDALLLCMHSPKHTL 222
Query: 264 GP-INIGNPGEFTMLELAENVKELINPNVEITMVE-NTPDDPRQRKPDITKATELLGWEP 321
G NI N + E+ ENV + ++ V + T I+K T L G EP
Sbjct: 223 GQKYNITNDERINLYEVIENVMKRLDKEVRYKKISYKTAFTLAAILEGISK-TILFGKEP 281
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 66/274 (24%), Positives = 111/274 (40%)
Query: 32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
NM+ILVTG G++G+ L L+ + +V T +L P EL DVT
Sbjct: 12 NMKILVTGSTGYLGARLCHVLLRRGHSVRALVRR--TSDLSDLP-----PEVELAYGDVT 64
Query: 92 E-PLLIEV----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
+ L + D ++H A P + +P + I NV G N+L K +I+
Sbjct: 65 DYRSLTDACSGCDIVFHAAALVEP--WLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIY 122
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
TS+ G +E+ N Y+ K VA+ + + + G+ I +
Sbjct: 123 TSSFFALGSTDGSVANENQVHNERFFCTE--YERSKAVADKMALNAASE-GVPIILLYPG 179
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
+GP + +V+ + + G GT SF +V D+V+G + ME G
Sbjct: 180 VIFGPG-KLTSANMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLG 238
Query: 265 P--INIGNPGEFTML-ELAENVKELINPNVEITM 295
+ G F ++ ++A + PN I +
Sbjct: 239 ERYLLTGENASFKLVFDMAALITGTKKPNFSIPL 272
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 60/236 (25%), Positives = 101/236 (42%)
Query: 28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
F + + +V GG+GF+G H+V+KL++ + V V D D ++ ++G +L
Sbjct: 5 FRSTGKKCVVIGGSGFLGQHMVEKLLDKGYS-VNVFDIQKRFDHDRVQFFLG----DLCN 59
Query: 88 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
+ P L +V +H A PA N K N +GT ++ K G +++LTS
Sbjct: 60 KEALLPALQDVSVAFHCASPAPS---SDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTS 116
Query: 147 TSEVY--GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA-RI 203
++ V G + + ++ + PI Y E K + E + + A R
Sbjct: 117 SASVVFEGTDIKNGTEDLPYAK-KPIDY---YTETKILQEKEVLSANDPDNNFFTTAIRP 172
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
+GPR D ++V I A G+ + G F YV ++V G I E
Sbjct: 173 HGIFGPR----DPQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVHGHILAAE 224
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 60/227 (26%), Positives = 102/227 (44%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI 96
V GG+GF+G H+V++L+E V V D + ++ +IG +L P L
Sbjct: 31 VIGGSGFLGQHMVEQLLERGYT-VNVFDIHQGFDNPRVQFFIG----DLCNQQDLYPALK 85
Query: 97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL 155
V ++H C ASP Y N + N IGT ++ + G +++LTS++ V + +
Sbjct: 86 GVSTVFH--C-ASPPPYSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSSASVVFEGV 142
Query: 156 -VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIEIRIARIFNTYGPRMN 212
+ E + PI Y E K + E + D + +++ + I R +GPR
Sbjct: 143 DIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKKNFLTAAI-RPHGIFGPR-- 196
Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
D ++V I A +G+ + G F +V ++V G I E
Sbjct: 197 --DPQLVPILIDAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 241
>SGD|S000002969 [details] [associations]
symbol:ERG26 "C-3 sterol dehydrogenase" species:4932
"Saccharomyces cerevisiae" [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA;IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006696 "ergosterol biosynthetic
process" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016126 "sterol biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0008202 "steroid metabolic process" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000252 "C-3 sterol dehydrogenase (C-4
sterol decarboxylase) activity" evidence=IDA] UniPathway:UPA00770
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 SGD:S000002969
EMBL:BK006941 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0006696 KO:K07748
OrthoDB:EOG4DNJD4 GO:GO:0000252 GO:GO:0047012 EMBL:Z72523
EMBL:AY693026 PIR:S64003 RefSeq:NP_011514.1
ProteinModelPortal:P53199 SMR:P53199 DIP:DIP-6786N IntAct:P53199
MINT:MINT-666123 STRING:P53199 PaxDb:P53199 PeptideAtlas:P53199
EnsemblFungi:YGL001C GeneID:852883 KEGG:sce:YGL001C CYGD:YGL001c
BioCyc:MetaCyc:YGL001C-MONOMER NextBio:972532 Genevestigator:P53199
GermOnline:YGL001C Uniprot:P53199
Length = 349
Score = 118 (46.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 35 ILVTGGAGFIGSHLVDKLME-NEKNEVIVVD---------NYFTGSKDNLRKWIGHPRFE 84
+L+ GG+GF+G HL+ + + N K ++ + D FT + D+++ G +
Sbjct: 7 VLIIGGSGFLGLHLIQQFFDINPKPDIHIFDVRDLPEKLSKQFTFNVDDIKFHKG----D 62
Query: 85 LIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
L D E + E + C ASP+ + NP NV GT N++ + K+ G IL+
Sbjct: 63 LTSPDDMENAINESKANVVVHC-ASPM-HGQNPDIYDIVNVKGTRNVIDMCKKCGVNILV 120
Query: 145 TSTSE--VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
++S ++ VH DE+ W P Y+E K +AE ++
Sbjct: 121 YTSSAGVIFNGQDVHNADET-WPI--PEVPMDAYNETKAIAEDMV 162
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/24 (37%), Positives = 17/24 (70%)
Query: 306 RKPDITKATELLGWEPKIKLRDGL 329
R +I KA +LLG+ P++ + +G+
Sbjct: 315 RYHNIAKAKKLLGYTPRVGIEEGI 338
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 73/288 (25%), Positives = 115/288 (39%)
Query: 34 RILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTG G IGS LV KL + + VI D T S+ + FE + DVT+
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEV-----VTSGPFETL--DVTD 55
Query: 93 PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+ EVD I HLA S K NP+ N+ G +N L A+ + +
Sbjct: 56 GQKLHDIAKRNEVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR--- 202
S+ +G P P+D + + + Y K E L YH++ G++ R R
Sbjct: 115 SSIGAFG-PST-PKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPG 170
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
+ + P V + +G + A GT Y+ D + +I LME +
Sbjct: 171 LISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADP 229
Query: 263 TGPINIGNPGEFTMLELA-ENVKELINPNVEITMVENTPDDPRQRKPD 309
+ ++ N T + E + I ++ ++ D RQ D
Sbjct: 230 SKLVH-RNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIAD 276
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 73/288 (25%), Positives = 115/288 (39%)
Query: 34 RILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
+ILVTG G IGS LV KL + + VI D T S+ + FE + DVT+
Sbjct: 3 KILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEV-----VTSGPFETL--DVTD 55
Query: 93 PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
+ EVD I HLA S K NP+ N+ G +N L A+ + +
Sbjct: 56 GQKLHDIAKRNEVDTIIHLAALLSATAEK-NPLFAWNLNMGGLVNALEAARELNCKFFTP 114
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR--- 202
S+ +G P P+D + + + Y K E L YH++ G++ R R
Sbjct: 115 SSIGAFG-PST-PKDNTPQDTIQR--PTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPG 170
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
+ + P V + +G + A GT Y+ D + +I LME +
Sbjct: 171 LISYVAPPGGGTTDYAVEIYYEAIKKGTYTSYIAEGTYM-DMMYMPDALQAIISLMEADP 229
Query: 263 TGPINIGNPGEFTMLELA-ENVKELINPNVEITMVENTPDDPRQRKPD 309
+ ++ N T + E + I ++ ++ D RQ D
Sbjct: 230 SKLVH-RNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDPARQTIAD 276
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/197 (27%), Positives = 97/197 (49%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---GSKD---NLRKWIGHPRFELIR 87
+ILVTGG G+IGSH V +L+E + V V+DN+ G D +LR+ ++
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPV-VIDNFSNAVRGEGDVPESLRRIEKFMDTQIEF 62
Query: 88 HDVT---EPLLIEVDQIY------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
H++ +P L ++ +++ H A + P++ + N+ GT+N+L + +
Sbjct: 63 HELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDY-HRQHG 195
G R ++ +S++ VYGDP P DE + P+G + Y + K E ++ D +
Sbjct: 123 GVRNLVFSSSATVYGDPQKLPIDEQH-----PVGGCTNPYGKTKYFIEEMIRDQCTAEKD 177
Query: 196 IEIRIARIFNTYGPRMN 212
+ R FN G ++
Sbjct: 178 WNAVLLRYFNPIGAHIS 194
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 67/294 (22%), Positives = 120/294 (40%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
++LVTGG G +G L + E + +F GSKD +L T+
Sbjct: 3 KVLVTGGTGLVGKALEAVIKEQSPEDE---QWFFAGSKDA----------DLTNLAATQA 49
Query: 94 LLI--EVDQIYHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
L + + HLA +F+ N + ++ N++ N+L A G +++ ++
Sbjct: 50 LFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTC 109
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
++ D +P DE+ N P Y KR+ + YH ++G N +GP
Sbjct: 110 IFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGP 169
Query: 210 RMNIDD--GRVVSNFIA---QAIRGE---P-----LTVQAPGTQTRSFCYVSDMVDGLIR 256
N + V+ I Q + + P TV G R F Y D+ + +I
Sbjct: 170 HDNYNPEVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIW 229
Query: 257 LMEG-ENTGPINIG--NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
++ E+ PI + E T+ E+A+ V + N N + + + + D + +K
Sbjct: 230 VLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGRL-VCDTSKSDGQYKK 282
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 125 (49.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 60/233 (25%), Positives = 98/233 (42%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI 96
V GG+GF+G H+V++L+E V V D ++ ++G +L P L
Sbjct: 30 VIGGSGFLGQHMVEQLLERGY-AVNVFDKRQGFDNPRVQFFLG----DLCNQQDLYPALK 84
Query: 97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL 155
V ++H A PA N + N IGT N++ + G +++LTS++ V + +
Sbjct: 85 GVSTVFHCASPAPS---SNNKELFYRVNYIGTKNVIETCREAGVQKLILTSSASVIFEGV 141
Query: 156 -VHPQDESYWGNVNPIGVRSCYDEGKRVAE-TLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
+ E + PI Y E K + E T++ R +GPR
Sbjct: 142 DIKNGTEDLPYAMKPIDY---YTETKILQEKTVLGANDPDKNFLTTAIRPHGIFGPR--- 195
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME--GENTG 264
D ++V I A +G+ V G F +V ++V G I E +TG
Sbjct: 196 -DPQLVPILIEAARKGKMKFVIGNGKNLVDFTFVENVVHGHILAAERLSRDTG 247
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 312 KATELLGWEPKIKLRDGLPLMEDDFR-LRLA 341
KA +LLG++P + + D + F LR A
Sbjct: 330 KAKKLLGYQPLVTMDDAVERTVQSFHHLRKA 360
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTE 92
++LVTG +GFIG+H V+ L++N V + +K ++K EL+ D+ +
Sbjct: 7 KVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELVEADLLD 66
Query: 93 PL-----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML-GLAKRVGAR-ILLT 145
+ D + H+A P PI + + I T V GT+N+L +A+ R ++LT
Sbjct: 67 STCWKKAVAGCDYVLHVASPF-PIV---SDERCITTAVEGTMNVLKAIAEDGNVRKLVLT 122
Query: 146 STSEVYGDPLVHPQ--DESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
S+ + + DE W N+ V CY + K +AE +D+
Sbjct: 123 SSCAAVNEGYTQDRVFDEDSWSNLESDMV-DCYIKSKTLAEKAAWDF 168
>TAIR|locus:2056171 [details] [associations]
symbol:AT2G02400 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase
activity" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC005312 HOGENOM:HOG000167998 EMBL:BT005781
EMBL:BT006079 EMBL:AK228447 IPI:IPI00542037 PIR:C84436
RefSeq:NP_178345.1 UniGene:At.41493 UniGene:At.69541
ProteinModelPortal:Q9ZVQ2 SMR:Q9ZVQ2 STRING:Q9ZVQ2 PaxDb:Q9ZVQ2
PRIDE:Q9ZVQ2 DNASU:814771 EnsemblPlants:AT2G02400.1 GeneID:814771
KEGG:ath:AT2G02400 TAIR:At2g02400 InParanoid:Q9ZVQ2 OMA:NGFIGSW
PhylomeDB:Q9ZVQ2 ProtClustDB:CLSN2683687 ArrayExpress:Q9ZVQ2
Genevestigator:Q9ZVQ2 Uniprot:Q9ZVQ2
Length = 318
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 66/268 (24%), Positives = 119/268 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHP-RFELIRHDVTE 92
+ VTG GFIGS ++ L+E K + + + GS +L + G + ++ D+ +
Sbjct: 6 VCVTGANGFIGSWIIRTLIE--KGYTKIHASIYPGSDPTHLLQLPGSDSKIKIFEADLLD 63
Query: 93 PLLIE--VDQ---IYHLACPASPIFYKYNPVKT-IKTNVIGTLNMLGLAKRVGAR-ILLT 145
I +D ++H+A P + + +P K ++ V GT+N+L AKR R +++T
Sbjct: 64 SDAISRAIDGCAGVFHVASPCT-LDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVIT 122
Query: 146 ST-SEVYGDPLVH---PQDESYWGNVNPIGVRS-CYDEGKRVAETLMFDYHRQHGIEIRI 200
S+ S + +P P DES W +++ R Y K +AE +++ +HG I
Sbjct: 123 SSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIVT 182
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
GP + N++ V + Q ++G T + +V D+ G + L
Sbjct: 183 IHPSTCLGPLLQPNLNASCAV---LLQLLQGSTETQEH---HWLGVVHVKDVAKGHVMLF 236
Query: 259 EGENTGPINIGNPGEFTMLELAENVKEL 286
E + + G + E A V +L
Sbjct: 237 ETPDASGRFLCTNGIYQFSEFAALVSKL 264
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 129 (50.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 61/234 (26%), Positives = 100/234 (42%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE- 92
R V GG GF+G H+V++L+ + + N F ++R+ +PR + D+
Sbjct: 22 RCTVIGGCGFLGQHMVEQLLA--RGYAV---NVF-----DIRQGFDNPRVQFFLGDLCSQ 71
Query: 93 ----PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
P L V ++H C ASP + N + N IGT N++ K G +++LTS+
Sbjct: 72 QDLYPALKGVSTVFH--C-ASPPPFNNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSS 128
Query: 148 SEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA-RIFN 205
+ V + + + E PI Y E K + E + H + A R
Sbjct: 129 ASVIFEGVDIKNGTEDLPYATKPIDY---YTETKILQERAVLGAHDPEKNFLTTAIRPHG 185
Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
+GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 186 IFGPR----DPQLVPILIEAAKKGKMKFMIGNGKNLVDFTFVENVVHGHILAAE 235
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 312 KATELLGWEPKIKLRDGL 329
KA +L+G+ P + + D +
Sbjct: 325 KAKKLMGYRPLVTMDDAV 342
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 52/193 (26%), Positives = 90/193 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT----GSK--DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ GS ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNAIRGGSSMPESLRRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-VDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + + YH K P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDY-HRQHG 195
G + ++ +S++ VYG+P P DE++ P G + Y + K E ++ D
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKA 177
Query: 196 IEIRIARIFNTYG 208
+ R FN G
Sbjct: 178 WNAVLLRYFNPIG 190
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 106 (42.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 51/191 (26%), Positives = 85/191 (44%)
Query: 36 LVTGGAGFIGSHLVDKLMEN--EKNEVIV-VDNYFTGSKDNLRK--WIGHPRFELIRHDV 90
L+TG G GS+L + L+E E + + ++ T D++ + +P+F L D+
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 91 TEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---- 139
++ +L EV D++Y+L + +P T + +GTL +L + +G
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 125
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
R STSE+YG PQ E+ P RS Y K A + +Y +G+
Sbjct: 126 TRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGMYAC 180
Query: 200 IARIFNTYGPR 210
+FN PR
Sbjct: 181 NGILFNHESPR 191
Score = 62 (26.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/19 (63%), Positives = 15/19 (78%)
Query: 309 DITKATELLGWEPKIKLRD 327
D TKA E LGW+P+I LR+
Sbjct: 323 DPTKAHEKLGWKPEITLRE 341
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 67/248 (27%), Positives = 108/248 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-----D-NLRKWIGHPRFELIRH 88
I+VTGGAGFIGS++V L + +++VVDN G+K D N+ ++ F LI+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 60
Query: 89 DVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E +V+ I+H AC ++ +++ + N + +L L S+
Sbjct: 61 MAGEEFG-DVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116
Query: 148 SEVYGDPLVH-PQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
+ YG + Y +N G + +DE R ++ + + Q I R FN
Sbjct: 117 AATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVR---QILPEANSQ----IVGFRYFN 169
Query: 206 TYGPRMNIDDGRVVS---NFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
YGPR G + S + Q GE P + R F YV D+ D + +E
Sbjct: 170 VYGPREG-HKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 228
Query: 262 NTGPINIG 269
+G N+G
Sbjct: 229 VSGIFNLG 236
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 119 (46.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 119 (46.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGS---KDNLRK---WIGHP-RF 83
++LVTGGAG+IGSH V +L+E V V+DN+ F G ++LR+ G F
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 84 E---LIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
E ++ + L + + H A + P+ + N+ GT+ +L + K
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY 163
G + ++ +S++ VYG+P P DE++
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH 148
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 66/232 (28%), Positives = 106/232 (45%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G R I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKT--GPVRVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
+ + H A +F + +P KTI + NV GT N++ + G R L+ TS
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASP-KTIHEVNVQGTRNVIEACVQTGTRFLVYTS 128
Query: 147 TSEVYG-DPLVHPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFDYHRQHGIEIR--I 200
+ EV G + HP Y GN + P R Y K +AE L+ + +G ++R +
Sbjct: 129 SMEVVGPNTKGHP---FYRGNEDTPYEAVHRHPYPCSKALAEWLVLE---ANGRKVRGGL 182
Query: 201 ARIFNTYGPRMNIDDG-RVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDM 250
+ P +G +++ +F Q +R G L P + YV ++
Sbjct: 183 PLVTCALRPTGIYGEGHQIMRDFYRQGLRLGGWLFRAIPASVEHGRVYVGNV 234
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 74/314 (23%), Positives = 127/314 (40%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+IL+TG G +G ++++ +++ + T S L L+ T+
Sbjct: 1 MKILLTGANGMVGKNILELASKHQHT-------FLTPSSKVLN---------LLDAASTQ 44
Query: 93 PLLIE--VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 148
L+E D I H A I +PVK + N+ LN+L AK G + L S+S
Sbjct: 45 AYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 149 EVYGDPLVHPQDESYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF-- 204
+Y ++P E G + P Y K +A T + +Y E+ I
Sbjct: 105 CMYPRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPC 161
Query: 205 NTYG--PRMNIDDGRVVSNFIAQAI--RGEPLT---VQAPGTQTRSFCYVSDMVDGLIRL 257
N YG + + + ++ I + I + + LT + G R F Y D+ D +
Sbjct: 162 NLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYA 221
Query: 258 MEGENTGP--INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATE 315
+ + P +N+G +FT+ + + + E+I + P +Q+ D K
Sbjct: 222 IANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNA 281
Query: 316 LLGWEPKIKLRDGL 329
GW K L +GL
Sbjct: 282 F-GWSYKTDLTEGL 294
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 74/314 (23%), Positives = 127/314 (40%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M+IL+TG G +G ++++ +++ + T S L L+ T+
Sbjct: 1 MKILLTGANGMVGKNILELASKHQHT-------FLTPSSKVLN---------LLDAASTQ 44
Query: 93 PLLIE--VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 148
L+E D I H A I +PVK + N+ LN+L AK G + L S+S
Sbjct: 45 AYLVEHKPDMIIHAAGVVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 149 EVYGDPLVHPQDESYW--GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF-- 204
+Y ++P E G + P Y K +A T + +Y E+ I
Sbjct: 105 CMYPRDALNPLSEELILKGELEP--TNEGYALAK-IASTRLCEYISHEEPELLYKTIIPC 161
Query: 205 NTYG--PRMNIDDGRVVSNFIAQAI--RGEPLT---VQAPGTQTRSFCYVSDMVDGLIRL 257
N YG + + + ++ I + I + + LT + G R F Y D+ D +
Sbjct: 162 NLYGRHDKFSPHNSHMIPAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYA 221
Query: 258 MEGENTGP--INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATE 315
+ + P +N+G +FT+ + + + E+I + P +Q+ D K
Sbjct: 222 IANFSRMPQNLNVGLGEDFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNA 281
Query: 316 LLGWEPKIKLRDGL 329
GW K L +GL
Sbjct: 282 F-GWSYKTDLTEGL 294
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 60/232 (25%), Positives = 105/232 (45%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---- 92
V GG+GF+G H+V++L+ + + N F ++R+ +PR + D+
Sbjct: 30 VIGGSGFLGQHMVEQLLA--RGYTV---NVF-----DMRQGFDNPRVQFFLGDLCSQQDL 79
Query: 93 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
P L V ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 80 YPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASV 136
Query: 151 YGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIEIRIARIFNTY 207
+ + + E + PI Y E K + E + D + +++ + + I R +
Sbjct: 137 IFEGVNIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKRNFLTMAI-RPHGIF 192
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 193 GPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 240
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ + D + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 147
+ + H A +F K +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGKTSPETIHEVNVQGTQNVIEACVQTGTRFLIYTSS 129
Query: 148 SEVYGDPLVHPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFD 189
EV G P + Q Y GN N P R Y K +AE L+ +
Sbjct: 130 MEVVG-PNIKGQP-FYRGNENTPYEAVHRHPYPCSKALAEQLVLE 172
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 125 (49.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 60/232 (25%), Positives = 105/232 (45%)
Query: 37 VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---- 92
V GG+GF+G H+V++L+ + + N F ++R+ +PR + D+
Sbjct: 42 VIGGSGFLGQHMVEQLLA--RGYTV---NVF-----DMRQGFDNPRVQFFLGDLCSQQDL 91
Query: 93 -PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
P L V ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 92 YPALKGVSTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASV 148
Query: 151 YGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH--RQHGIEIRIARIFNTY 207
+ + + E + PI Y E K + E + D + +++ + + I R +
Sbjct: 149 IFEGVNIKNGTEDLPYAMKPIDY---YTETKILQERAVLDANDPKRNFLTMAI-RPHGIF 204
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR D ++V I A +G+ + G F +V ++V G I E
Sbjct: 205 GPR----DPQLVPILIEAARKGKMKFMIGNGENLVDFTFVENVVHGHILAAE 252
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 124 (48.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 59/238 (24%), Positives = 104/238 (43%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
S+ R V GG+GF+G HLV++L VD +T + ++R+ P + D+
Sbjct: 8 SSKRCTVIGGSGFLGRHLVERL----------VDRGYTVNVFDIRQAYELPGVTFYQGDL 57
Query: 91 TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
+ L + EV ++H A PA + + N+ GT ++ G +++L
Sbjct: 58 CDKLALVMALKEVSIVFHCASPAPG---SDDGALFQRVNIDGTRTVIQACHEAGVQKLIL 114
Query: 145 TSTSEVY--GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY-HRQHGIEIRIA 201
TS++ V G + + +++ + PI Y E K E L+ + ++ G
Sbjct: 115 TSSASVVFEGTDIKNGKEDLPYAK-KPIDY---YTETKIKQEKLVLEACSKEKGFLTVAI 170
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
R +GPR D ++V + A RG+ + G+ F YV ++V G I E
Sbjct: 171 RPHGIFGPR----DPQLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVHGHILAAE 224
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 121 (47.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 61/229 (26%), Positives = 97/229 (42%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
R V GG+GF+G H+V++L+ V V D +R ++G +L P
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGY-AVNVFDIQQGFDNPQVRFFLG----DLCSRQDLYP 93
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 152
L V+ ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 94 ALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIF 150
Query: 153 DPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA-RIFNTYGPR 210
+ + + E + PI Y E K + E + + + A R +GPR
Sbjct: 151 EGVDIKNGTEDLPYAMKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR 207
Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
D ++V I A G+ V G F +V ++V G I E
Sbjct: 208 ----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAE 252
>CGD|CAL0005951 [details] [associations]
symbol:ERG26 species:5476 "Candida albicans" [GO:0000252 "C-3
sterol dehydrogenase (C-4 sterol decarboxylase) activity"
evidence=IGI;ISS] [GO:0006696 "ergosterol biosynthetic process"
evidence=IGI;ISS] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 110 (43.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-P-RFELIR 87
+S +L+ GG+GF+G HL+++ + N I V + + L K+ P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDV-RPLPEKLSKYFTFDPSKIQFFK 61
Query: 88 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI------KTNVIGTLNMLGLAKRVGAR 141
D+T + D I C I + +P+ + K NV GT N+L +A+++ +
Sbjct: 62 GDLTSDKDVS-DAINQSKCDV--IVHSASPMHGLPQEIYEKVNVQGTKNLLSVAQKLHVK 118
Query: 142 ILL-TSTSEVY--GDPLVHPQDESY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
L+ TS++ V G +++ DE++ + V+ G Y+E K AE + + +
Sbjct: 119 ALVYTSSAGVIFNGQDVINA-DETWPYPEVHMDG----YNETKAAAEEAVMKANDNDQLR 173
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
R +GP D ++V A A G+ + YV ++ D
Sbjct: 174 TVCLRPAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 53 (23.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 306 RKPDITKATELLGWEPKIKLRDGL 329
R +I KA +LLG++P++ L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>UNIPROTKB|Q5A1B0 [details] [associations]
symbol:ERG26 "Putative uncharacterized protein ERG26"
species:237561 "Candida albicans SC5314" [GO:0000252 "C-3 sterol
dehydrogenase (C-4 sterol decarboxylase) activity" evidence=IGI]
[GO:0006696 "ergosterol biosynthetic process" evidence=IGI]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 CGD:CAL0005951
eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006696 KO:K07748 GO:GO:0000252 EMBL:AACQ01000084
EMBL:AACQ01000083 RefSeq:XP_715564.1 RefSeq:XP_715620.1
ProteinModelPortal:Q5A1B0 STRING:Q5A1B0 GeneID:3642731
GeneID:3642803 KEGG:cal:CaO19.10427 KEGG:cal:CaO19.2909
Uniprot:Q5A1B0
Length = 350
Score = 110 (43.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 55/235 (23%), Positives = 103/235 (43%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-P-RFELIR 87
+S +L+ GG+GF+G HL+++ + N I V + + L K+ P + + +
Sbjct: 3 ESLQSVLIIGGSGFLGLHLIEQFYRHCPNVAITVFDV-RPLPEKLSKYFTFDPSKIQFFK 61
Query: 88 HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI------KTNVIGTLNMLGLAKRVGAR 141
D+T + D I C I + +P+ + K NV GT N+L +A+++ +
Sbjct: 62 GDLTSDKDVS-DAINQSKCDV--IVHSASPMHGLPQEIYEKVNVQGTKNLLSVAQKLHVK 118
Query: 142 ILL-TSTSEVY--GDPLVHPQDESY-WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
L+ TS++ V G +++ DE++ + V+ G Y+E K AE + + +
Sbjct: 119 ALVYTSSAGVIFNGQDVINA-DETWPYPEVHMDG----YNETKAAAEEAVMKANDNDQLR 173
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
R +GP D ++V A A G+ + YV ++ D
Sbjct: 174 TVCLRPAGIFGP----GDRQLVPGLRASAKLGQSKYQLGDNNNLFDWTYVGNVAD 224
Score = 53 (23.7 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 306 RKPDITKATELLGWEPKIKLRDGL 329
R +I KA +LLG++P++ L G+
Sbjct: 316 RYHNIAKAKKLLGYKPEVDLETGI 339
>ASPGD|ASPL0000028763 [details] [associations]
symbol:AN11081 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694 EMBL:BN001305
ProteinModelPortal:C8VEF0 EnsemblFungi:CADANIAT00002923 OMA:WIAVITE
Uniprot:C8VEF0
Length = 364
Score = 115 (45.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 62/231 (26%), Positives = 100/231 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
+L+TGG GFI H++ KL+ + N I +D + N+ H + H
Sbjct: 9 VLITGGNGFIAYHIIAKLLAEDPNCTIHCID---INTTRNI-----HASDSVTYHQGDLS 60
Query: 94 LLIEVDQIYHLACPASPIFYKYNPV-----KTIKTNVI--GTLNMLGLAKRVGA--RILL 144
L +V +I LA P + IF+ +P ++ +VI GT ++L A +G ++
Sbjct: 61 SLADVSRIMELARPVT-IFHTASPEFSEAPESAYHDVIVTGTHHLLNSAASIGTVKALIN 119
Query: 145 TSTSEVYGD---PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
TSTS V D LV+ ++ + P + Y K AE + +RQHG
Sbjct: 120 TSTSGVINDNHTDLVNGTEDM--PILRPPVQKRLYCLAKADAEEAIQAANRQHGFLTCAL 177
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
R +G R G++V+ +A+A G G F YV ++ D
Sbjct: 178 RPCLAFGERDTNSMGKMVA--VARA--GRSRFQMGYGKNAYDFVYVGNLAD 224
Score = 48 (22.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 7/25 (28%), Positives = 18/25 (72%)
Query: 305 QRKPDITKATELLGWEPKIKLRDGL 329
+R + KA +LG++P++ +++G+
Sbjct: 325 ERTLNCEKARRVLGYQPRVGMQEGI 349
>TAIR|locus:2122093 [details] [associations]
symbol:DRL1 "dihydroflavonol 4-reductase-like1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0010584 "pollen exine formation" evidence=IMP]
[GO:0080110 "sporopollenin biosynthetic process" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005783
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0080110 GO:GO:0016491 GO:GO:0048316 EMBL:AL022604
EMBL:AL161587 UniGene:At.2276 UniGene:At.63750 HOGENOM:HOG000167998
EMBL:BT022119 EMBL:BT025661 IPI:IPI00531159 PIR:T06115
RefSeq:NP_195268.2 ProteinModelPortal:Q500U8 SMR:Q500U8
IntAct:Q500U8 PaxDb:Q500U8 PRIDE:Q500U8 EnsemblPlants:AT4G35420.1
GeneID:829695 KEGG:ath:AT4G35420 TAIR:At4g35420 InParanoid:Q500U8
OMA:GETEKFQ PhylomeDB:Q500U8 ProtClustDB:CLSN2680286
BioCyc:ARA:AT4G35420-MONOMER BioCyc:MetaCyc:AT4G35420-MONOMER
Genevestigator:Q500U8 Uniprot:Q500U8
Length = 326
Score = 122 (48.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 66/249 (26%), Positives = 110/249 (44%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVI--VVDNYFTGSKDNLRKWIG-HPRFELI 86
Q+ ++ VTG +GF+ S LV +L+ E EVI V D +L K G R L+
Sbjct: 3 QAKGKVCVTGASGFLASWLVKRLLL-EGYEVIGTVRDPGNEKKLAHLWKLEGAKERLRLV 61
Query: 87 RHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVI-GTLNMLGLAKRVGA 140
+ D+ E ++ ++H A P + NP + I I GTLN+L ++ +
Sbjct: 62 KADLMEEGSFDNAIMGCQGVFHTASPV--LKPTSNPEEEILRPAIEGTLNVLRSCRKNPS 119
Query: 141 --RILLTSTSEVYG-----DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHR 192
R++LTS+S DP + P DES W +V + Y K +AE + +
Sbjct: 120 LKRVVLTSSSSTVRIRDDFDPKI-PLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSE 178
Query: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
++GI++ GP + D S+ + ++GE Q G + ++ D+
Sbjct: 179 ENGIDLVTVLPSFLVGPSLPPDLCSTASDVLG-LLKGETEKFQWHGQM--GYVHIDDVAR 235
Query: 253 GLIRLMEGE 261
I + E E
Sbjct: 236 THIVVFEHE 244
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 56/188 (29%), Positives = 82/188 (43%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIV--VDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
ILVTGGAG+IGSH V +L+ N V++ +DN S ++ G L H V
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKDLAGDHGQNLTVHQVDL 64
Query: 92 --EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-I 142
+P L +V D + H A + P+ N+I T+ +L + G + +
Sbjct: 65 RDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKL 124
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA- 201
+ +S++ VYG P P E +P+ S Y K E + D R E RI
Sbjct: 125 VFSSSATVYGWPKEVPCTEE-----SPLSGMSPYGRTKLFIEDICRDVQRGDP-EWRIIM 178
Query: 202 -RIFNTYG 208
R FN G
Sbjct: 179 LRYFNPVG 186
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 53/194 (27%), Positives = 92/194 (47%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIGHPRFELIRHDVT 91
++LVTGGAG+IGSH V +L+E + V V+DN+ +D++ + + + EL V
Sbjct: 3 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNAIRGEDSMPESLRRVQ-ELTGRSVE 60
Query: 92 EPLLIEVDQ--IYHLACPAS---PIFYK---------YNPVKTIKTNVIGTLNMLGLAKR 137
+ +DQ + HL S I + P+ + N+ GT+ +L + +
Sbjct: 61 FEEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA 120
Query: 138 VGAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHG 195
G + ++ +S++ VYG+P P DE++ P G + Y + K E ++ D R
Sbjct: 121 HGVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCRADT 175
Query: 196 I-EIRIARIFNTYG 208
+ R FN G
Sbjct: 176 AWNAVLLRYFNPIG 189
>WB|WBGene00012394 [details] [associations]
symbol:hsd-1 species:6239 "Caenorhabditis elegans"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;IMP] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA] [GO:0016616 "oxidoreductase activity, acting
on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IGI] [GO:0016126 "sterol biosynthetic process"
evidence=IMP] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0002119 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0016126
EMBL:AL032655 PIR:T27323 RefSeq:NP_493402.1 UniGene:Cel.28002
ProteinModelPortal:Q9XWF0 EnsemblMetazoa:Y6B3B.11 GeneID:189371
KEGG:cel:CELE_Y6B3B.11 UCSC:Y6B3B.11 CTD:189371 WormBase:Y6B3B.11
HOGENOM:HOG000020706 InParanoid:Q9XWF0 OMA:VLRFNGI NextBio:942172
Uniprot:Q9XWF0
Length = 462
Score = 102 (41.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 95 LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY-- 151
L +VD +YHLA Y + + N +GT+N+L A+ G R + TS+ V
Sbjct: 140 LEQVDTVYHLAAVGMTGQYARDRKACMDINAVGTMNLLIWARNSGVQRFIYTSSVGVVFS 199
Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
G+P+ + +E + P + Y E K AE ++ H + + R YGP
Sbjct: 200 GEPMYNATEEVGY----PDDFYNYYCESKAHAERIV-QKASGHRMRTTVLRFNGIYGP-- 252
Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAP-GTQTRS-FCYVSDMVDGLIR 256
+ RV + + G + P G + ++ V++ + GL++
Sbjct: 253 --GEKRVTERVVKFMLTGMWIATCKPNGVEAQTQLSSVANCIQGLVK 297
Score = 62 (26.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEV 60
++L+TGGAG + +LV KL E ++ +
Sbjct: 46 KVLITGGAGHLAENLVAKLEEMTRDSI 72
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK------DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + V V+DN+ + ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPV-VIDNFHNSIRGEDSMPESLRRVQELTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ GT+ +L + +
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 139 GARILLTSTSE-VYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
G + L+ S+S VYG+P P DE++ P G + Y + K E ++ D R
Sbjct: 123 GVKSLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIQDLCRADTA 177
Query: 197 -EIRIARIFNTYG 208
+ R FN G
Sbjct: 178 WNAVLLRYFNPIG 190
>UNIPROTKB|Q3Z6W4 [details] [associations]
symbol:DET1324 "Putative uncharacterized protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE- 92
R+ V+GG+GF+G HL+ +L EN ++V N + K + P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMN------EAEAKRVKTPGVEFVYGTVNDL 57
Query: 93 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
P+L+E + I + + K N+ GT NML A + G +
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVK 106
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 220 SNFIAQAIRG-EPLTVQAP--GT-QTR-SFCYVSDMVDGLIRLMEGENTGP-INIGNPGE 273
+ FI IR +P + AP G +TR +V D+V L+++++GE + IG P
Sbjct: 155 AGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQSVQIGGPRI 214
Query: 274 FTMLEL 279
FT E+
Sbjct: 215 FTYDEV 220
>TIGR_CMR|DET_1324 [details] [associations]
symbol:DET_1324 "conserved hypothetical protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0702 KO:K00356
HOGENOM:HOG000168008 KO:K00329 OMA:VKRFIHM RefSeq:YP_182035.1
ProteinModelPortal:Q3Z6W4 STRING:Q3Z6W4 GeneID:3229421
KEGG:det:DET1324 PATRIC:21609677 ProtClustDB:CLSK935576
BioCyc:DETH243164:GJNF-1325-MONOMER Uniprot:Q3Z6W4
Length = 302
Score = 97 (39.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE- 92
R+ V+GG+GF+G HL+ +L EN ++V N + K + P E + V +
Sbjct: 4 RVFVSGGSGFVGGHLLPRLAENGFKIRLLVMN------EAEAKRVKTPGVEFVYGTVNDL 57
Query: 93 PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
P+L+E + I + + K N+ GT NML A + G +
Sbjct: 58 PVLMESMKDIFAVIHLVAILRENKDITFEKVNIEGTKNMLAAADQNGVK 106
Score = 61 (26.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 220 SNFIAQAIRG-EPLTVQAP--GT-QTR-SFCYVSDMVDGLIRLMEGENTGP-INIGNPGE 273
+ FI IR +P + AP G +TR +V D+V L+++++GE + IG P
Sbjct: 155 AGFITALIRSFKPYPLLAPVAGNGKTRLQPIWVEDVVSCLLKMLDGEKIHQSVQIGGPRI 214
Query: 274 FTMLEL 279
FT E+
Sbjct: 215 FTYDEV 220
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 105 (42.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 54/228 (23%), Positives = 90/228 (39%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDN--LRKWIGHPRFELIRHD 89
+VTGG GF HLV+ L+ + V + D ++ L + I R + + D
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSAD 72
Query: 90 VTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
+ + + ++H+A P S I N NV GT N++ VG R++
Sbjct: 73 LRNKTQVVKGFQGAEVVFHMAAPDSSI---NNHQLQYSVNVQGTTNVIDACIEVGVKRLI 129
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
TS+ V D VH + P Y K E L+ + + G+ R
Sbjct: 130 YTSSPSVVFDG-VHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCIRP 188
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
+ +GP D +V + + A G+ + G+ F YV ++V
Sbjct: 189 SSIFGP----GDKLMVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVV 232
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 256 RLMEGENTGPINIGNPGEFTM--LELAENVKELINP-NVEITMVENTPDDPR----QRKP 308
+L+EG +I P M L E +L+ P +++ ++ TP R R
Sbjct: 273 QLLEGLGYERPSIKIPASLMMPIAYLVELAYKLLGPYGMKVPVL--TPSRVRLLSCNRTF 330
Query: 309 DITKATELLGWEPKIKLRDGLPLMEDDF 336
D +KA + LG+ P + L++G+ D F
Sbjct: 331 DSSKAKDRLGYSPVVPLQEGIKRTIDSF 358
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 121 (47.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 61/229 (26%), Positives = 97/229 (42%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
R V GG+GF+G H+V++L+ V V D +R ++G +L P
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGY-AVNVFDIQQGFDNPQVRFFLG----DLCSRQDLYP 93
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG 152
L V+ ++H C ASP N + N IGT N++ K G +++LTS++ V
Sbjct: 94 ALKGVNTVFH--C-ASPPPSSNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIF 150
Query: 153 DPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA-RIFNTYGPR 210
+ + + E + PI Y E K + E + + + A R +GPR
Sbjct: 151 EGVDIKNGTEDLPYAMKPIDY---YTETKILQERAVLGANDPEKNFLTTAIRPHGIFGPR 207
Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
D ++V I A G+ V G F +V ++V G I E
Sbjct: 208 ----DPQLVPILIEAARNGKMKFVIGNGKNLVDFTFVENVVHGHILAAE 252
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 312 KATELLGWEPKIKLRDGLPLMEDDFR 337
+A + +G++P + + D + FR
Sbjct: 342 RAKKAMGYQPLVTMDDAMERTVQSFR 367
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 93 (37.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 50/195 (25%), Positives = 81/195 (41%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGHPRF-ELIRHD 89
M ILVTG AGFIGSH V +L+ N V+ +DN+ D I R +L D
Sbjct: 1 MHILVTGAAGFIGSHTVLELL-NSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD 59
Query: 90 VT--------EPLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA 135
V E L +V D I HLA + P++ N++ +LN++ +
Sbjct: 60 VPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMC 119
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNP-IGVRSCYDEGKRVAETLMFDYHRQH 194
+ + + S+S P P + G+ + Y + K + E ++ D + +
Sbjct: 120 LKYNVKNFVFSSSATVYGP---PSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKAN 176
Query: 195 GI-EIRIARIFNTYG 208
+ + R FN G
Sbjct: 177 PEWNVVLLRYFNPVG 191
Score = 67 (28.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/96 (21%), Positives = 44/96 (45%)
Query: 238 GTQTRSFCYVSDMVDGLIRLMEGENT-GPI-----NIGNPGEFTMLELAENVKELINPNV 291
GT R + +V D+ G ++ + T G I N+G +++ ++ + +K++ ++
Sbjct: 236 GTGVRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDI 295
Query: 292 EITMVENTPDDPRQRKPDITKATELLGWEPKIKLRD 327
+ + P D D + A E LGW + L +
Sbjct: 296 PVKIGVPRPGDVASVYCDPSLAQEKLGWRAETGLEE 331
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 66/264 (25%), Positives = 109/264 (41%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI-RHDVTEP 93
I+VTGGAG IGS+++ L E +++VVD+ G K + + + + R D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDLQIADYMDRDDFLAQ 59
Query: 94 LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
++ +D I+H AC A+ +++ + N + +L L S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHG---IEIRIARI 203
+ YG+ ++ Y G +N G + +D R L D +QH +I R
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVR---RLWLDA-KQHDETLSQITGFRY 172
Query: 204 FNTYGPRMNIDDGRVVS---NFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
FN YGPR G + S + Q GE P R F YV D+ + ++
Sbjct: 173 FNVYGPREQ-HKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLD 231
Query: 260 GENTGPINIGNPGEFTMLELAENV 283
+G N G + E+A+ V
Sbjct: 232 HGVSGIFNCGTGKAESFNEVAKAV 255
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 66/264 (25%), Positives = 109/264 (41%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI-RHDVTEP 93
I+VTGGAG IGS+++ L E +++VVD+ G K + + + + R D
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRK--FKNLVDLQIADYMDRDDFLAQ 59
Query: 94 LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
++ +D I+H AC A+ +++ + N + +L L S+
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATT---EWDGKYVMLNNYEYSKELLHYCLDREIPFLYASS 116
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHG---IEIRIARI 203
+ YG+ ++ Y G +N G + +D R L D +QH +I R
Sbjct: 117 AATYGETDTFIEEPQYEGALNVYGYSKQQFDNYVR---RLWLDA-KQHDETLSQITGFRY 172
Query: 204 FNTYGPRMNIDDGRVVS---NFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
FN YGPR G + S + Q GE P R F YV D+ + ++
Sbjct: 173 FNVYGPREQ-HKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLD 231
Query: 260 GENTGPINIGNPGEFTMLELAENV 283
+G N G + E+A+ V
Sbjct: 232 HGVSGIFNCGTGKAESFNEVAKAV 255
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 101 (40.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 43/179 (24%), Positives = 76/179 (42%)
Query: 97 EVDQIYHLA--CPASPIFYKY-NPVKTIKTNVIGTLNMLG-----LAKRVGARILLT--- 145
E+++I H+ S + + +P+ K N++ T N+L L K+ R L
Sbjct: 87 EINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILLGKKEELRNRLNFVH 146
Query: 146 -STSEVYGDPLVHPQ-DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
ST EVYG+ + DE +NP S Y K + ++ Y + I + + R
Sbjct: 147 VSTDEVYGEQDENASVDEK--SKLNPT---SPYAASKAAVDLIIQSYRYSYKISVTVIRA 201
Query: 204 FNTYGPR--------MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
N YGPR M + + N +Q I + +T+ G R + ++ D ++ +
Sbjct: 202 NNVYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIYDFINAI 260
Score = 58 (25.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 258 MEGENTGPI-NIGNPGEFTMLELAENV------KELINPNVE----ITMVENTPDDPRQR 306
+E + +G I NIG+ E L L + + ++L N++ IT V++ + +
Sbjct: 276 LESKMSGQIFNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYITFVQDRNYNDSRY 335
Query: 307 KPDITKATELLGWEPKIKLRDGLPLMEDDF 336
+ K L GW P+I L GL + D++
Sbjct: 336 SLNYEKIKSL-GWRPQIPLETGLRKLIDEY 364
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 74/302 (24%), Positives = 135/302 (44%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL--IRHDVT 91
R L+TG GF G ++ D+L ++ + +G+ + +L +R V
Sbjct: 9 RALITGLEGFTGRYVADEL---RRSGYEIFGTRHSGADEREAGCFRVDICDLAALRRVVE 65
Query: 92 EPLLIEVDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNML-GLA--KRVGARILLTST 147
E +E + + HLA + F + I + NV+GT N+L LA R +LL S+
Sbjct: 66 E---VEPEVVVHLAAIS---FVAHGEADAIYRANVVGTRNLLEALAGLSRTPRAVLLASS 119
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT- 206
+ VYG+ V DES ++ P + Y K E + + H + I IAR FN
Sbjct: 120 ANVYGNAPVELIDESV--SLAPA---NDYAVSKLAMEYMARLW--MHRLPIVIARPFNYT 172
Query: 207 -YGPRMNIDDGRVVSNFIAQA--IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
G + ++VS+F +A I L V+ R F V + +RL+E
Sbjct: 173 GVGQASHFLIPKIVSHFQRRASVIELGNLDVE------RDFSDVRVVALAYVRLLEVVPA 226
Query: 264 GPI-NIGNPGEFTMLELAENVKELINPNVEITMVEN--TPDDPRQRKPDITKATELLG-W 319
G + N+G+ ++ E+ + + +E+ + ++ ++ + D+++ EL+G +
Sbjct: 227 GQVVNVGSGQVVSLREVLAMMSGISGHEIEVRVNPEFVRANEVKRLQGDVSRLKELIGGY 286
Query: 320 EP 321
+P
Sbjct: 287 QP 288
>TAIR|locus:2123797 [details] [associations]
symbol:SQD1 "sulfoquinovosyldiacylglycerol 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0008146 "sulfotransferase
activity" evidence=IDA] [GO:0009247 "glycolipid biosynthetic
process" evidence=IDA] [GO:0046506 "sulfolipid biosynthetic
process" evidence=IDA] [GO:0046507 "UDPsulfoquinovose synthase
activity" evidence=IDA] [GO:0016036 "cellular response to phosphate
starvation" evidence=IEP;IMP;RCA] [GO:0008270 "zinc ion binding"
evidence=IDA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0008270 GO:GO:0009247 GO:GO:0016036 EMBL:AL031804
EMBL:AL161582 GO:GO:0008146 EMBL:AF022082 EMBL:AF380641
EMBL:AY113071 IPI:IPI00524549 PIR:T05311 RefSeq:NP_195029.1
UniGene:At.2479 PDB:1I24 PDB:1I2B PDB:1I2C PDB:1QRR PDBsum:1I24
PDBsum:1I2B PDBsum:1I2C PDBsum:1QRR ProteinModelPortal:O48917
SMR:O48917 IntAct:O48917 STRING:O48917 PaxDb:O48917 PRIDE:O48917
ProMEX:O48917 EnsemblPlants:AT4G33030.1 GeneID:829440
KEGG:ath:AT4G33030 TAIR:At4g33030 HOGENOM:HOG000014371
InParanoid:O48917 KO:K06118 OMA:QMTETHR PhylomeDB:O48917
ProtClustDB:PLN02572 BioCyc:MetaCyc:MONOMER-1201
EvolutionaryTrace:O48917 Genevestigator:O48917 GermOnline:AT4G33030
GO:GO:0046507 Uniprot:O48917
Length = 477
Score = 86 (35.3 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 36/122 (29%), Positives = 54/122 (44%)
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGENTGPINIGNP--G 272
G ++ F QA G PLTV G QTR + + D V + I + G + N
Sbjct: 320 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 379
Query: 273 EFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDI---TKATEL--LGWEPKIKLRD 327
+F++ ELA V + + + + + T +PR + K T+L LG EP L D
Sbjct: 380 QFSVNELASLVTKA-GSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHY-LSD 437
Query: 328 GL 329
L
Sbjct: 438 SL 439
Score = 60 (26.2 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 24/73 (32%), Positives = 32/73 (43%)
Query: 97 EVDQIYHL----ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEV 150
E D + H + P S I + V T NVIGTLN+L K G ++ T
Sbjct: 173 EPDSVVHFGEQRSAPYSMID-RSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 231
Query: 151 YGDPLVHPQDESY 163
YG P + + E Y
Sbjct: 232 YGTPNIDIE-EGY 243
Score = 53 (23.7 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 16 PPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN 65
PP T + SK R++V GG G+ G L ++KN EV +VDN
Sbjct: 72 PPETSTNNSSSK----PKRVMVIGGDGYCG--WATALHLSKKNYEVCIVDN 116
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 51/173 (29%), Positives = 79/173 (45%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L+ G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKT--GPVQVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 147
+ + H A +F + +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASPETIYEVNVQGTKNVIEACVQTGTRFLVYTSS 129
Query: 148 SEVYGDPLVHPQDESYWGNVN-PIGV--RSCYDEGKRVAETLMFDYH--RQHG 195
EV G P + Y GN + P R Y K AE L+ + + + HG
Sbjct: 130 MEVVG-PNIKGH-HFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVHG 180
>UNIPROTKB|G4MPV2 [details] [associations]
symbol:MGG_09238 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005913 Pfam:PF04321 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CM001231 GO:GO:0008831
GO:GO:0045226 RefSeq:XP_003709861.1 ProteinModelPortal:G4MPV2
EnsemblFungi:MGG_09238T0 GeneID:2680178 KEGG:mgr:MGG_09238
Uniprot:G4MPV2
Length = 292
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 60/263 (22%), Positives = 107/263 (40%)
Query: 31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
+N R L+ GG G++ HL L K D Y T + R+ + L +
Sbjct: 2 TNNRFLIWGGEGWVAGHLASILKSQGK------DVYTTTVRMENREGV------LAELEK 49
Query: 91 TEPLLIEVDQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
+P + + C P + + N T+++NVIGTLN+ + G + +T
Sbjct: 50 VKPTHV----LNCAGCTGRPNVDWCEDNKEATMRSNVIGTLNLTDACFQKGIHCTVFATG 105
Query: 149 EVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
+Y HP D + + S Y E K E +M Y+ I R+
Sbjct: 106 CIYQYDDAHPWDGPGFLETDKANFAGSFYSETKAHVEEVMKYYNN-----CLILRL---- 156
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPIN 267
RM + D NF+ + + + + V P + T + D++ + + E ++TG N
Sbjct: 157 --RMPVSDDLHPRNFVTKIAKYDRV-VDIPNSNT----ILHDLLPLSLAMAEHKDTGVYN 209
Query: 268 IGNPGEFTMLELAENVKELINPN 290
NPG + E+ ++++ P+
Sbjct: 210 FTNPGAISHNEVLTLFRDIVRPS 232
>TAIR|locus:2200427 [details] [associations]
symbol:CCR1 "cinnamoyl coa reductase 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0009809 "lignin biosynthetic process"
evidence=IDA] [GO:0016621 "cinnamoyl-CoA reductase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0007623 "circadian
rhythm" evidence=IEP] [GO:0009409 "response to cold" evidence=IEP]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00711
InterPro:IPR016040 EMBL:CP002684 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009409 EMBL:AC010924
GO:GO:0009809 EMBL:AF320624 EMBL:AY743921 EMBL:AF332459
EMBL:AF321114 EMBL:AK228419 EMBL:AY087316 IPI:IPI00547128
PIR:A86294 RefSeq:NP_173047.1 UniGene:At.23016 UniGene:At.72454
ProteinModelPortal:Q9S9N9 SMR:Q9S9N9 STRING:Q9S9N9 PRIDE:Q9S9N9
EnsemblPlants:AT1G15950.1 GeneID:838165 KEGG:ath:AT1G15950
TAIR:At1g15950 InParanoid:Q9S9N9 KO:K09753 OMA:TEYVINA
PhylomeDB:Q9S9N9 ProtClustDB:PLN02214
BioCyc:MetaCyc:AT1G15950-MONOMER Genevestigator:Q9S9N9
GO:GO:0016621 Uniprot:Q9S9N9
Length = 344
Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
Identities = 48/187 (25%), Positives = 84/187 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVT-- 91
+ VTG G+I S +V L+E V N +LR+ G R L + D+
Sbjct: 13 VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72
Query: 92 EPLLIEVDQ---IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
E L +D ++H A P + +P + ++ V G ++ A R+++TS+
Sbjct: 73 EALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127
Query: 148 -SEVYGDPLVHPQ---DESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
VY DP P+ DES W +++ ++ Y GK VAE ++ ++ G+++ +
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187
Query: 203 IFNTYGP 209
GP
Sbjct: 188 PVLVLGP 194
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 58/236 (24%), Positives = 98/236 (41%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
M IL+TG AGFIG L +L+ + +++ D ++ + + +P+ VT
Sbjct: 1 MHILITGAAGFIGQLLARELLNDPSYTLVLTDI----NEPPIPAGVKYPQNA---RTVTA 53
Query: 93 PLLIEVDQIYHLACPASPIFY-------KYNPVKTIKTNVIGTLNMLGLAKRV--GARIL 143
L+ D + + A F+ + N + NV T +L + G R++
Sbjct: 54 DLVKAADTVVDKSLDAVYAFHGIMSSGSEANFDLGMTVNVDATRKLLEALRATCPGVRVI 113
Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRI 200
+S+ VYG PL D++ V P +S Y K + ETL+ +Y R+ G +R
Sbjct: 114 YSSSQAVYGQPLPEVVDDT----VIPTP-QSSYGAEKLICETLVNEYTRRGFITGFTLRF 168
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF-CYVSDMVDGLI 255
I G R +S I + + GE + +S+ C +V LI
Sbjct: 169 PTISVRPG-RPTAAASSFLSGMIREPLNGEECVIPLEDRSFKSWLCSPKTLVHNLI 223
>UNIPROTKB|I3LGP6 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 GO:GO:0042350
Ensembl:ENSSSCT00000029895 OMA:KNTHINI Uniprot:I3LGP6
Length = 318
Score = 114 (45.2 bits), Expect = 0.00057, P = 0.00057
Identities = 77/295 (26%), Positives = 124/295 (42%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q + RILVTGG+G +G + K++ + + D F SKD +L
Sbjct: 7 QRSTRILVTGGSGLVG-RAIQKVVADGAR-LPGEDWVFVSSKDA----------DLTNAA 54
Query: 90 VTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
T L +V + HLA +F KYN + + NV ++L A VGAR +++
Sbjct: 55 QTRALFEKVQPTHVIHLAAMVGGLFRNMKYN-LDFWRKNVHINDSVLHSAFEVGARKVVS 113
Query: 146 STSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
S ++ D +P DES V IG R+ + + R+F
Sbjct: 114 CLSTCIFPDKTTYPIDESM---VREIG-RAXRGRARAACSGRPGPAFQTQAPP---GRLF 166
Query: 205 NTYGPRMNIDDGRVVSNFIAQ----AI-----RGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
+ NI+DG V+ I + A+ RG L V G R F Y D+ +
Sbjct: 167 GPHD-NFNIEDGHVLPGLIHKVHLAALPLPTGRGSALMVWGTGRPRRQFIYSLDLARLFL 225
Query: 256 RLM-EGENTGPINI--GNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
++ E + PI + G G ++ E AE V E ++ + E+ + + T D + +K
Sbjct: 226 WVLREYDQVEPIILSGGTLGPXSIREAAEAVVEAMDFHGEV-IFDTTKSDGQFKK 279
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 115 (45.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 60/252 (23%), Positives = 106/252 (42%)
Query: 99 DQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GARILLTSTSEVYGDPLV 156
D + H+A P + Y+ P++T TNV+GTL++L A+ R ++ T++
Sbjct: 85 DVLIHMAAQPLVRLSYR-EPLETYATNVMGTLHVLEAARLCPNLRAIVNVTTDK-----C 138
Query: 157 HPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGP 209
+ E WG P+G Y K E + Y + AR N G
Sbjct: 139 YENREWEWGYREDEPMGGHDPYSNSKGCVELITASYRNSFFNTPQAAALASARAGNVIGG 198
Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME---------- 259
+D R++ + + +G+P+TV+ P TR + +V + + G + L E
Sbjct: 199 GDWAED-RLIPDILRAFEKGQPVTVRNPQA-TRPWQHVLEPLSGYLVLAEHLWKNGHQFA 256
Query: 260 -GENTGPINI-GNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELL 317
G N GP + P E+ + + ++ + + ++ ++ P + K DI+KA L
Sbjct: 257 QGWNFGPKDEDARPVEWILNYMVDSWGDGAHWQLDR---DSHPHEANYLKLDISKARARL 313
Query: 318 GWEPKIKLRDGL 329
W P L L
Sbjct: 314 NWAPTWNLEKTL 325
Score = 39 (18.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 29 FQSNMRILVTGGAGFIGSHL 48
F ++ +TG GF GS L
Sbjct: 9 FWQGKKVFLTGHTGFKGSWL 28
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 114 (45.2 bits), Expect = 0.00068, P = 0.00068
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSK-DNLRKW--IGHPRFEL 85
++LVTGGAG+IGSH V +L+E + + V+DN+ GS ++LR+ + E
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPM-VIDNFHNAIRGGGSMPESLRRVQDLTGRSVEF 62
Query: 86 IRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
D+ + ++ + H A + P+ + N+ GT+ +L + +
Sbjct: 63 EEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDY-HRQHG 195
G + ++ +S++ VYG+P P DE++ P G + Y + K E ++ D
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEMIRDLCQADKA 177
Query: 196 IEIRIARIFNTYG 208
+ R FN G
Sbjct: 178 WNAVLLRYFNPIG 190
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 118 (46.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 52/190 (27%), Positives = 85/190 (44%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVT- 91
ILVTGGAG+IGSH V +L+ N +VI+VDN D + + +I + + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELI-NHGYKVIIVDNLCNSCYDAVARVEFIVRKSIKFFKLDLRD 66
Query: 92 -EPLL-----IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILL 144
E L ++ + H A + P++ N+ GT+ +L + + + ++
Sbjct: 67 KEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVKTVVF 126
Query: 145 TSTSEVYGDPL----VHPQDESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGI-EI 198
+S++ VYGD + P ES + NP Y + K E ++ D H
Sbjct: 127 SSSATVYGDATRFDNMIPIPESCPNDPTNP------YGKTKYAIENIIKDLHTSDNTWRG 180
Query: 199 RIARIFNTYG 208
I R FN G
Sbjct: 181 AILRYFNPIG 190
Score = 43 (20.2 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 281 ENVKELINPNVEITMVENTPD 301
+N+ E+I+P+V + +V +T +
Sbjct: 612 KNIVEVIHPSVPVKLVVSTTE 632
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 103 (41.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 61/273 (22%), Positives = 114/273 (41%)
Query: 27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----- 81
K F+ L+TG G GS+L + L+ ++ + + + G+P
Sbjct: 28 KAFRERKVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNG 87
Query: 82 --RFELIRHDVTEP-----LL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNM 131
F L D+T+ L+ IE +IYHLA S + ++ P T + + +GTL +
Sbjct: 88 SASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKVSFDLPEYTAEVDAVGTLRL 146
Query: 132 LGL--AKRVGARILL--TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
L A R+ ++ STSE+YG PQ E + P RS Y K ++
Sbjct: 147 LDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LTPFYPRSPYAVAKMYGYWIV 201
Query: 188 FDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQ-AIRGEPLTVQAPGTQTRSFC 245
+Y + + +FN PR R ++ +A+ ++R + + R +
Sbjct: 202 VNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWG 261
Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLE 278
+ + V+ + R+++ + I +F++ E
Sbjct: 262 HAKEYVEAMWRILQQDTPDDFVIATGKQFSVRE 294
Score = 52 (23.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 312 KATELLGWEPKIKLRDGLP-LMEDDFRLRLAVP 343
KA + LGWEPKI + + + ++ D L A P
Sbjct: 348 KARKTLGWEPKITVPELVKEMVASDIALMEADP 380
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 103 (41.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 61/273 (22%), Positives = 114/273 (41%)
Query: 27 KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----- 81
K F+ L+TG G GS+L + L+ ++ + + + G+P
Sbjct: 28 KAFRERKVALITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNG 87
Query: 82 --RFELIRHDVTEP-----LL--IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNM 131
F L D+T+ L+ IE +IYHLA S + ++ P T + + +GTL +
Sbjct: 88 SASFSLHYGDMTDSSCLIKLISTIEPTEIYHLAAQ-SHVKVSFDLPEYTAEVDAVGTLRL 146
Query: 132 LGL--AKRVGARILL--TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
L A R+ ++ STSE+YG PQ E + P RS Y K ++
Sbjct: 147 LDAIHACRLTEKVRFYQASTSELYGKVQEIPQSE-----LTPFYPRSPYAVAKMYGYWIV 201
Query: 188 FDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQ-AIRGEPLTVQAPGTQTRSFC 245
+Y + + +FN PR R ++ +A+ ++R + + R +
Sbjct: 202 VNYREAYKMFACNGILFNHESPRRGETFVTRKITRSVAKISLRQQEHIELGNLSALRDWG 261
Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLE 278
+ + V+ + R+++ + I +F++ E
Sbjct: 262 HAKEYVEAMWRILQQDTPDDFVIATGKQFSVRE 294
Score = 52 (23.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 312 KATELLGWEPKIKLRDGLP-LMEDDFRLRLAVP 343
KA + LGWEPKI + + + ++ D L A P
Sbjct: 348 KARKTLGWEPKITVPELVKEMVASDIALMEADP 380
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 52/236 (22%), Positives = 102/236 (43%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRF-ELIRHDVTE 92
+IL+TGG G +G L ++ +++ + S+ L G F +++ +
Sbjct: 47 KILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLEN--GPYIFADILDFKGLQ 104
Query: 93 PLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 150
++++ +D + H + S + + P+ ++ N+ G N++ LAK+ RI + ST
Sbjct: 105 KIVVDHRIDWLIHFSALLSAVGEQNVPL-AVRVNIEGVHNVIELAKQYKLRIFVPSTIGA 163
Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR---IFNTY 207
+G P++ + NV R+ Y K AE + Y+ + G++ R R + ++
Sbjct: 164 FGPD--SPRNPT--PNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISSD 219
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQA-PGTQTRSFCYVSDMVDGLIRLMEGEN 262
P D V +A+R T P T+ Y+ D + L+ M N
Sbjct: 220 PPGGGTTDYAVA--VFHEALRNGKYTCYLRPDTRL-PMMYIEDCLRALLEFMRAPN 272
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 115 (45.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 56/197 (28%), Positives = 87/197 (44%)
Query: 32 NMRI-LVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSK-DNLRKWIGHPR---FE 84
N ++ L+TG G GS+L + L+E E + + + F + D+L K H F+
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYK-DPHEEDVNFK 60
Query: 85 LIRHDVTEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
L D+T+ +L EV D++Y+L + +P T + IGTL +L +
Sbjct: 61 LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRF 120
Query: 138 VG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
+G + STSE+YG PQ E+ P RS Y K A + +Y
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRES 175
Query: 194 HGIEIRIARIFNTYGPR 210
+GI +FN PR
Sbjct: 176 YGIYACNGILFNHESPR 192
Score = 38 (18.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 309 DITKATELLGWEPKIKLR 326
D + A + LGW P+I L+
Sbjct: 324 DPSLAKKELGWVPEITLQ 341
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 115 (45.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 56/197 (28%), Positives = 87/197 (44%)
Query: 32 NMRI-LVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSK-DNLRKWIGHPR---FE 84
N ++ L+TG G GS+L + L+E E + + + F + D+L K H F+
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYK-DPHEEDVNFK 60
Query: 85 LIRHDVTEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
L D+T+ +L EV D++Y+L + +P T + IGTL +L +
Sbjct: 61 LHYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRF 120
Query: 138 VG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
+G + STSE+YG PQ E+ P RS Y K A + +Y
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKMYAYWITINYRES 175
Query: 194 HGIEIRIARIFNTYGPR 210
+GI +FN PR
Sbjct: 176 YGIYACNGILFNHESPR 192
Score = 38 (18.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 309 DITKATELLGWEPKIKLR 326
D + A + LGW P+I L+
Sbjct: 324 DPSLAKKELGWVPEITLQ 341
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 105 (42.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 36 LVTGGAGFIGSHLVDKLMEN--------EKNEVIV---VDNYFTGSKDNLRKWIGHPRFE 84
L+TG G GS+L + L+E ++ + +D+ + + + +K+ H
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 85 LIRHDVTEPLL-IEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVG--- 139
++T L ++ D++Y+L S + + P T + IGTL +L + +G
Sbjct: 68 TDSSNLTRILKDVQPDEVYNLGAQ-SHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLEK 126
Query: 140 -ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
+ STSE+YG+ PQ E+ P RS Y K A ++ +Y +G+
Sbjct: 127 KTKFYQASTSELYGEVQEIPQSET-----TPFHPRSPYAVAKMYAYWIVVNYRESYGMYA 181
Query: 199 RIARIFNTYGPR 210
+FN PR
Sbjct: 182 CNGILFNHESPR 193
Score = 49 (22.3 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 277 LELAENVKELINPNVEITMVEN--TPDDPRQRKP--------DITKATELLGWEPKIKLR 326
L+ V ++I N V + DPR +P D +KA E LGW P+I +
Sbjct: 283 LDEVARVTKIIGDNAPALSVGDIMVKVDPRYFRPAEVETLLGDPSKAKEKLGWVPQITVE 342
Query: 327 D 327
+
Sbjct: 343 E 343
>UNIPROTKB|G4N5T6 [details] [associations]
symbol:MGG_08527 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CM001234 RefSeq:XP_003716031.1
EnsemblFungi:MGG_08527T0 GeneID:2678789 KEGG:mgr:MGG_08527
Uniprot:G4N5T6
Length = 339
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00083
Identities = 58/243 (23%), Positives = 99/243 (40%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL-IRH 88
Q+ IL+TG +G IG L +L+ + + V++ D + + HP + I+
Sbjct: 4 QNKPTILITGASGMIGPLLAARLLSTDTHRVVLTDVV----APTVPPSVAHPENAVCIQA 59
Query: 89 DVTEPLLIEVDQIYHLACPASPIFY-------KYNPVKTIKTNVIGTLNMLG-LAK-RVG 139
D+T P +E A+ +F+ + +P ++ N T +L LA G
Sbjct: 60 DLTNPAALEALVAASQPLTAAFVFHGIMSAGSEADPALAMRVNFDATRALLTHLASTNRG 119
Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
R++ S++ VYG PL P + P G Y K + E L+ D R+ ++
Sbjct: 120 LRVVYASSNAVYGTPL--PDLVTPATTPTPTGT---YGATKYLCEVLVNDMTRRGLVDAY 174
Query: 200 IARIFNTYGPRMNIDDGRV---VSNFIAQAIRGEPLTVQAPGTQTRS-FCYVSDMVDGLI 255
R F T R +S I + + G P V R+ C V+ L+
Sbjct: 175 SVR-FPTVSVRPGAPSNAASAFLSGIIREPLAGLPCVVPIADRAFRATLCTPRVCVENLV 233
Query: 256 RLM 258
R++
Sbjct: 234 RVL 236
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 113 (44.8 bits), Expect = 0.00094, P = 0.00094
Identities = 57/227 (25%), Positives = 99/227 (43%)
Query: 36 LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
LVTGG GF+G H+V L++ E E+ V D + + L G + I+ DVT+
Sbjct: 13 LVTGGCGFLGEHVVRMLLQQEPRLCELRVFDLHLGPWLEELET--GPVQVTAIQGDVTQA 70
Query: 94 -----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TST 147
+ + H A +F + +P + NV GT N++ + G R L+ TS+
Sbjct: 71 HEVAAAVAGAHVVIHTAGLVD-VFGRASPETIHEVNVQGTQNVIEACVQNGTRFLVYTSS 129
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR--IARIFN 205
EV G P + + + + R Y K +AE L+ + +G ++R + +
Sbjct: 130 MEVVG-PTTRGNENTPYEAAH----RHPYPRSKALAERLVLE---ANGRKVRGGLPLVTC 181
Query: 206 TYGPRMNIDDG-RVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDM 250
P +G +++ +F Q +R G L P + YV ++
Sbjct: 182 ALRPTGIYGEGHQIMKDFYHQGLRLGGRLLRAIPASVEHGRVYVGNV 228
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 346 346 0.00098 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 219
No. of states in DFA: 602 (64 KB)
Total size of DFA: 231 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.90u 0.13s 30.03t Elapsed: 00:00:01
Total cpu time: 29.94u 0.13s 30.07t Elapsed: 00:00:01
Start: Tue May 21 03:50:09 2013 End: Tue May 21 03:50:10 2013
WARNINGS ISSUED: 1