RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 019061
(346 letters)
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 142 bits (359), Expect = 5e-42
Identities = 89/180 (49%), Positives = 124/180 (68%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
+PVV++GPSG GK TL+ L +E S+FGFSVSHTTR PR E+DG Y+F R +M++
Sbjct: 1 RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRD 60
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICP 253
I G F+E A GNLYGTS EAV AV + C+LD+D+QG RS++ + L I+IF+ P
Sbjct: 61 IAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQP 120
Query: 254 PSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKVI 313
PS++ LE+RLR R TETE+ + KRL A+ +++ K G+FD ++ ND L++ Y LK
Sbjct: 121 PSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQA 180
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 141 bits (355), Expect = 4e-41
Identities = 75/181 (41%), Positives = 97/181 (53%), Gaps = 4/181 (2%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSM-FGFSVSHTTRAPRAMEKDGVHYHFTERSVMEK 192
+++ PSG GK +LI L+K P SVSHTTR PR E G HY F ++
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKE 62
Query: 193 AIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFIC 252
I FLE A V GN YGTS EA+E V G LDID QGA+ +R A IFI
Sbjct: 63 MISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFIL 122
Query: 253 PPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKV 312
PPS EL+ RLR RG ++E+ I KR+ A E+ +D+++ ND + +LK
Sbjct: 123 PPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAE---YDYLIVNDDFDTALTDLKT 179
Query: 313 I 313
I
Sbjct: 180 I 180
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 138 bits (349), Expect = 1e-40
Identities = 88/181 (48%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
+P+VI+GPSG GK TL+ L E+P FGFSVS TTR PRA E +G Y+F +
Sbjct: 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSM 61
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASP-LDAIFIFIC 252
IK+ +F+E+A GN YG++V +V+ V+ +GK CILDID+QG +SV+A P L+A F+FI
Sbjct: 62 IKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIA 121
Query: 253 PPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKV 312
PPS+E+L++RL RGTETE+ I KRL A+ E+ + +G D ++ ND L++ Y+ LK
Sbjct: 122 PPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAE-TGAHDKVIVNDDLDKAYKELKD 180
Query: 313 I 313
Sbjct: 181 F 181
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 127 bits (320), Expect = 3e-36
Identities = 45/183 (24%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 131 NVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVM 190
++ K +V+ G GVG+ + + L+ + P F + + HTTR P+ E++G +Y+F M
Sbjct: 1 HMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQM 60
Query: 191 EKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIF 250
+ I + ++LE+ S +YGT +E + + + G ILD++ Q + +R + +F
Sbjct: 61 MQDISNNEYLEYGSHEDAMYGTKLETIRKIHEQGLIAILDVEPQALKVLRTAEFAPFVVF 120
Query: 251 ICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 310
I P++ D+ L+RL+ + +++ + FD + N++++E +L
Sbjct: 121 IAAPTITPGLNE---------DESLQRLQKESDILQRTYAH-YFDLTIINNEIDETIRHL 170
Query: 311 KVI 313
+
Sbjct: 171 EEA 173
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 123 bits (308), Expect = 2e-34
Identities = 69/181 (38%), Positives = 96/181 (53%), Gaps = 9/181 (4%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF-TERSVMEK 192
+P++I GP K L+ EFP FG V HTTR R E DG YHF + R MEK
Sbjct: 10 RPIIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKMEK 66
Query: 193 AIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFIC 252
I+ KF+E + +LYGTSV++V VA+ GK CILD+ R ++A+ L I IFI
Sbjct: 67 DIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIFIR 126
Query: 253 PPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKV 312
P S+E + E + TE+Q K A + + + + F I+ D EE Y +K
Sbjct: 127 PRSLENVLEINKRI---TEEQARKAFDRATKLEQ--EFTECFSAIVEGDSFEEIYHKVKR 181
Query: 313 I 313
+
Sbjct: 182 V 182
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 113 bits (283), Expect = 5e-31
Identities = 71/182 (39%), Positives = 109/182 (59%), Gaps = 6/182 (3%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
+ VV++GPS VGK T++ L + P+ FSVS TTRAPR E DGV YHF + + ++
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPN-LHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQL 61
Query: 194 IKDGKFLEFASVHGNL--YGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFI 251
I G+ LE+A +HG L GT + V A A G ++++D+ GAR+++ + +A+ +F+
Sbjct: 62 IDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFL 121
Query: 252 CPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 311
PPS ++L+ RL RGTET D I +RL A+ E+ FD ++ N +LE L
Sbjct: 122 APPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGD---FDKVVVNRRLESACAELV 178
Query: 312 VI 313
+
Sbjct: 179 SL 180
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 58.9 bits (141), Expect = 4e-11
Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 13/156 (8%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
+ +++ G S GK ++ L P + + + + + +
Sbjct: 4 RMIILNGGSSAGKSGIVRCLQSVLPEPW-LAFGVDS------LIEAMPLKMQSAEGGIEF 56
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVR-----ASPLDAIF 248
DG L G E V A+A AG R I+D G + + +
Sbjct: 57 DADGGV-SIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVL 115
Query: 249 IFICPPSMEELEERLRARGTETEDQILKRLRNAKEE 284
E R ARG K+ E
Sbjct: 116 WVGVRCDGAVAEGRETARGDRVAGMAAKQAYVVHEG 151
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 58.1 bits (139), Expect = 7e-11
Identities = 29/183 (15%), Positives = 49/183 (26%), Gaps = 21/183 (11%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
K +ITGP+GVGK T L + + + +
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNI 62
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICP 253
+ A V + + I I
Sbjct: 63 TDLTVN-------------FLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILW 109
Query: 254 PSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYND---KLEECYENL 310
+ EEL R R ++Q+ +R EE + GI + YN + + +
Sbjct: 110 TNREELLRRDALRK--KDEQMGERCLELVEEFES---KGIDERYFYNTSHLQPTNLNDIV 164
Query: 311 KVI 313
K +
Sbjct: 165 KNL 167
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 58.4 bits (140), Expect = 7e-11
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 26/144 (18%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
++++G G GK T+ L GV +
Sbjct: 5 NILLLSGHPGSGKSTIAEALANLP---------------------GVPKVHFHSDDLWGY 43
Query: 194 IKDGKFLEFASVHG----NLYGTSVEAVEAVADAGKRCILDIDVQGA-RSVRASPLDAIF 248
IK G+ + + + + A G ILD V+ + +
Sbjct: 44 IKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLH 103
Query: 249 IFICPPSMEELEERLRARGTETED 272
+ + E ER RG ++
Sbjct: 104 YIVLRTTAAEAIERCLDRGGDSLS 127
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 49.3 bits (116), Expect = 6e-08
Identities = 19/156 (12%), Positives = 45/156 (28%), Gaps = 11/156 (7%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
K ++ G G GK T + + P + + + M + + +
Sbjct: 3 KIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQ--SIMAHEERDEYKYTKKKEGIV 60
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICP 253
+ ++G V + + +R + + +
Sbjct: 61 TGMQFDTAKSILYGGDSVKGVIISDTNLNPERR-------LAWETFAKEYGWKVEHKVFD 113
Query: 254 PSMEELEERLRARGTE--TEDQILKRLRNAKEEIKQ 287
EL +R RGT+ D + ++ +E +
Sbjct: 114 VPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYLGL 149
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 40.8 bits (94), Expect = 6e-05
Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 17/149 (11%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
V+ G SG GK + S + + + F R G + +R +A+
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALN 68
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
D F + +L S A K+ D+ +G ++ L
Sbjct: 69 DAAFAMQRTNKVSLIVCS---------ALKKHYRDLLREGNPNLSFIYLKGD-------- 111
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEE 284
+ +E RL+AR + + +
Sbjct: 112 FDVIESRLKARKGHFFKTQMLVTQFETLQ 140
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 40.8 bits (94), Expect = 6e-05
Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 31/190 (16%)
Query: 133 EKP----VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYH-FTER 187
E+P ++ITG G GK ++ M+ E V + +
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIE 60
Query: 188 SVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAI 247
E + D S +D + +
Sbjct: 61 EKDEDRLLDFMEPIMVSRGN---------------------HVVDYHSSELFPERWFHMV 99
Query: 248 FIFICPPSMEELEERLRARGTETE---DQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 304
+ E L ERL R + + ++ EE + + ND LE
Sbjct: 100 VVLHTST--EVLFERLTKRQYSEAKRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLE 157
Query: 305 ECYENLKVIC 314
+ ++ I
Sbjct: 158 QMAATVEEIR 167
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 38.5 bits (88), Expect = 5e-04
Identities = 26/173 (15%), Positives = 42/173 (24%), Gaps = 24/173 (13%)
Query: 134 KPVVIT--GPSGVGKGTLISMLMKEFPS------MFGFSVSHTTR--------APRAMEK 177
+P + G G GK T ++ K + P+
Sbjct: 8 QPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAM 67
Query: 178 DGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRC--ILDIDVQG 235
Y A + K + VE + + L+ +
Sbjct: 68 PFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKF 127
Query: 236 ARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQI----LKRLRNAKEE 284
D I P E ER+R R E + L+ L E+
Sbjct: 128 IEESIHVQADLIIYLRTSP--EVAYERIRQRARSEESCVPLKYLQELHELHED 178
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 38.3 bits (88), Expect = 5e-04
Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 12/182 (6%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+V+ G G GKGT ++++ +G T RA ++G +S M++
Sbjct: 3 IVLMGLPGAGKGTQADRIVEK----YGTPHISTGDMFRAAIQEGTELGVKAKSFMDQ--- 55
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
G + G + ++ + A + + +
Sbjct: 56 -GALVPDEVTIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQ 114
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEE----IKQGKSSGIFDHILYNDKLEECYENLK 311
+E+ E R + D + RL + + S + +I +++ +++L
Sbjct: 115 VEKEELIARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLVNINGQKDIKDVFKDLD 174
Query: 312 VI 313
VI
Sbjct: 175 VI 176
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 37.7 bits (86), Expect = 8e-04
Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 9/160 (5%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
K ++TG GVGK T+++ + + + G + + + +R M K
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEILDNQ-GINNKIINYGDFMLATALKLGYAKDRDEMRKL 60
Query: 194 IKDGKFLEFASV---HGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIF 250
+ + E + + G S + ++ IF
Sbjct: 61 SVEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIF 120
Query: 251 ICPPSMEELEERLRARGT-----ETEDQILKRLRNAKEEI 285
+ + + R + T +++ ++ N
Sbjct: 121 LLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYA 160
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 37.6 bits (86), Expect = 0.001
Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 7/158 (4%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHT---TRAPRAMEKDGVHYHFTERSVM 190
K VV+TG GVG T + M G + + +++ + + M
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE-GVNYKMVSFGSVMFEVAKEENLVSDRDQMRKM 60
Query: 191 EKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIF 250
+ + + E+ AV + G S + L+ I
Sbjct: 61 DPETQKRIQKMAGRKIAEMAK---ESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLII 117
Query: 251 ICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQG 288
+ + +E+ R + T D + + +
Sbjct: 118 VVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRC 155
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 36.8 bits (84), Expect = 0.002
Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 4/151 (2%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
V++ GP G GKGT L ++ G T R ++G + ++
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEK----LGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDL 58
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
L V L + + + R + +DA+ F
Sbjct: 59 VPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEE 118
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEEIK 286
+ + R R +T+D IL R++ ++E
Sbjct: 119 VLLERLKGRGRADDTDDVILNRMKVYRDETA 149
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 35.9 bits (81), Expect = 0.003
Identities = 18/158 (11%), Positives = 38/158 (24%), Gaps = 9/158 (5%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHT------TRAPRAMEKDGVHYHFTERSV 189
+ I G S GK TL + L + RA R + + +
Sbjct: 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYYLQW 84
Query: 190 MEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDA--- 246
+ + F + + H + + +
Sbjct: 85 DVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQRKEWRPFF 144
Query: 247 IFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEE 284
F+ E R + + + + R A++
Sbjct: 145 DFVVYLDCPREIRFARENDQVKQNIQKFINRYWKAEDY 182
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 36.4 bits (83), Expect = 0.004
Identities = 24/139 (17%), Positives = 44/139 (31%), Gaps = 6/139 (4%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+ +TG G GK T + G V+ P + G + + + A
Sbjct: 57 LGVTGTPGAGKSTFLEAFGMLLIRE-GLKVAVIAVDPSSPVTGGSILG-DKTRMNDLARA 114
Query: 196 DGKFLEFASVHGNLYGTS---VEAVEAVADAGKRCILDIDVQGARSVRASPLDA-IFIFI 251
+ F+ G+L G S E + AG ++ V +S FI +
Sbjct: 115 EAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISL 174
Query: 252 CPPSMEELEERLRARGTET 270
+ + ++ E
Sbjct: 175 QIAGGGDDLQGIKKGLMEV 193
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 35.4 bits (80), Expect = 0.004
Identities = 23/173 (13%), Positives = 43/173 (24%), Gaps = 19/173 (10%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMF--------------GFSVSHTTRAPRAMEKDG 179
K V I G GK L++ L F + G + M
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGH 67
Query: 180 VHYHFTERSVMEKAIKDGKF----LEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQG 235
Y K F + ++++ +L + +
Sbjct: 68 QRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEW 127
Query: 236 ARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQ-ILKRLRNAKEEIKQ 287
S +++L ++ + E E L R K I++
Sbjct: 128 VDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEK 180
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 35.3 bits (80), Expect = 0.005
Identities = 24/182 (13%), Positives = 57/182 (31%), Gaps = 12/182 (6%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+V+ G G GKGT ++ +G T RA K+G + M++
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAA----YGIPHISTGDMFRAAMKEGTPLGLQAKQYMDR--- 55
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
G + G + + + A + + ++
Sbjct: 56 -GDLVPDEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHID 114
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEE----IKQGKSSGIFDHILYNDKLEECYENLK 311
+ + R + E + RL ++ + + G +I +E+ + +++
Sbjct: 115 VRQDVLMERLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIR 174
Query: 312 VI 313
+
Sbjct: 175 EL 176
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 34.5 bits (78), Expect = 0.007
Identities = 21/167 (12%), Positives = 43/167 (25%), Gaps = 21/167 (12%)
Query: 134 KPVVITGPSGVGKGTLISMLMKE--FPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
+P+ + G G G T+ L + + + T + R
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRES 62
Query: 192 KAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGA--RSVRASPLDAIFI 249
+A++ G + + + G L + R +
Sbjct: 63 EALQAVATPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQASLQAHQRPT 122
Query: 250 FICPPSMEELEERLRARG-----------------TETEDQILKRLR 279
P EE+E LR R ++++ +R
Sbjct: 123 LTGRPIAEEMEAVLREREALYQDVAHYVVDATQPPAAIVCELMQTMR 169
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 34.6 bits (78), Expect = 0.007
Identities = 16/72 (22%), Positives = 28/72 (38%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
++ITG GVGK TL+ +++ + R P ++ G TE + K
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62
Query: 196 DGKFLEFASVHG 207
+ +G
Sbjct: 63 FFTSKKLVGSYG 74
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 35.0 bits (80), Expect = 0.010
Identities = 25/191 (13%), Positives = 47/191 (24%), Gaps = 49/191 (25%)
Query: 136 VVITGPSGVGKGTLISMLMKEF----------PSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
V I GP G+GK T +L+ P + + + +
Sbjct: 7 VYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIAN-IYTTQHRLDQG 65
Query: 186 ERSVMEKAIKDGKF-LEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRAS-- 242
E S + A+ + + + A + + + R A+
Sbjct: 66 EISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALL 125
Query: 243 ----------------------------PLDAIFIFICPPSMEELEERLRARGTETEDQI 274
P I + P + +RL R E ++
Sbjct: 126 CYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVLGALPE--DRHIDRLAKRQRPGE-RL 182
Query: 275 ----LKRLRNA 281
L +R
Sbjct: 183 DLAMLAAIRRV 193
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 34.8 bits (79), Expect = 0.011
Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 133 EKPVVI--TGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVM 190
+ P+ I +GP G GK + +G S D + ++ +
Sbjct: 25 KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGY-----ASIDDFYLTHEDQLKL 79
Query: 191 EKAIKDGKFLEFASVHGN 208
+ K+ K L+ + G
Sbjct: 80 NEQFKNNKLLQGRGLPGT 97
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 34.9 bits (79), Expect = 0.011
Identities = 30/118 (25%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 138 ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDG 197
ITG GVGK T I L + G V+ P + G R + AI
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAA-GHKVAVLAVDPSSTRTGGSILGDKTR-MARLAIDRN 113
Query: 198 KFLEFASVHGNLYGTSVEAVEAVA---DAGKRCILDIDVQGARSVRASPLDAIFIFIC 252
F+ + G L G + + E + AG IL V +S A F +
Sbjct: 114 AFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVL 171
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 34.1 bits (77), Expect = 0.012
Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
V+I+G GKGT ++ + + + RA G + MEK
Sbjct: 6 VMISGAPASGKGTQCELIKTK----YQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQL 61
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
+ V L + + D R +R
Sbjct: 62 VPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIR-------PDTFILLD 114
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEEIKQGKS--SGIFDHILYNDKLEECYENLKVI 313
+ + R +TE+++ RL + I+ S I + + ++ + + +
Sbjct: 115 VPDELLVERVVFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDEL 174
Query: 314 CYCLMQISDNLI 325
+++ + ++
Sbjct: 175 LGSILEKKNEMV 186
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 34.2 bits (78), Expect = 0.021
Identities = 24/193 (12%), Positives = 47/193 (24%), Gaps = 53/193 (27%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRA-------------MEKDGVHY 182
+ + G G+GK T ++ P A +
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLY---FPEPMAYWRTLFETDVISGIYDTQNRK 65
Query: 183 HFTERSVMEKAIKDGKF-LEFASVHGNLYGTS-----VEAVEAVADAGKRCILDIDVQGA 236
+V + A+ + F + + L+ + +++ + D +
Sbjct: 66 QQGNLAVDDAALITAHYQSRFTTPYLILHDHTCTLFGGNSLQRGTQPDLTLVFDRHPVAS 125
Query: 237 RSVRAS------------------------PLDAIFIFICPPSMEELEERLRARGTETED 272
+ I + EE RLR R +
Sbjct: 126 TVCFPAARYLLGDMSMCALMAMVATLPREPQGGNIVVTTLNV--EEHIRRLRTRARI-GE 182
Query: 273 QI----LKRLRNA 281
QI + LRN
Sbjct: 183 QIDITLIATLRNV 195
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 33.0 bits (74), Expect = 0.028
Identities = 35/182 (19%), Positives = 57/182 (31%), Gaps = 30/182 (16%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+++TG GVGK TL L + G+ Y E+ +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS---------------------GLKYINVGDLAREEQLY 45
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
DG E+ + V+ + + + + +D G +F+
Sbjct: 46 DGYDEEYDCPILDED----RVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDT- 100
Query: 256 MEELEERLRARGTETE---DQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKV 312
L ERL RG + D I + E H L ++K EE N+
Sbjct: 101 -NVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQ 159
Query: 313 IC 314
I
Sbjct: 160 IL 161
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 32.6 bits (73), Expect = 0.039
Identities = 28/178 (15%), Positives = 53/178 (29%), Gaps = 19/178 (10%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+++ G GKGT +M++ +G T RA K G + +M+
Sbjct: 3 IILLGAPVAGKGTQAQFIMEK----YGIPQISTGDMLRAAVKSGSELGKQAKDIMDA--- 55
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
GK + V + + I A +D + F P
Sbjct: 56 -GKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDE 114
Query: 256 MEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKVI 313
+ R + E+ + KRL + + + Y+ + E +
Sbjct: 115 L----IVDRIVKDDQEETVRKRLVEYHQMTAP-----LIGY--YSKEAEAGNTKYAKV 161
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 32.6 bits (73), Expect = 0.042
Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 28/196 (14%)
Query: 134 KPVVI--TGPSGVGKGTLISMLMKEFPSMFGFSV------------SHTTRAPRAMEKDG 179
P++I TG G GK T+ ++L +G+ V + R +
Sbjct: 2 HPIIIGITGNIGSGKSTVAALLRS-----WGYPVLDLDALAARARENKEEELKRLFPEAV 56
Query: 180 VHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSV 239
V R++ D + L+ + + E L+I + +
Sbjct: 57 VGGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLEIPLLFEKGW 116
Query: 240 RASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRN-AKEEIKQGKSSGIFDHIL 298
+ + R+ AR + +++L R R EE K+ ++ +L
Sbjct: 117 EGRLHGTLLVAAPLEER---VRRVMARSGLSREEVLARERAQMPEEEKRKRA----TWVL 169
Query: 299 YNDK-LEECYENLKVI 313
N LE+ LK +
Sbjct: 170 ENTGSLEDLERALKAV 185
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 32.7 bits (74), Expect = 0.054
Identities = 22/195 (11%), Positives = 41/195 (21%), Gaps = 53/195 (27%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRA-------------MEKDGVHY 182
+ + G G+GK T + F + P + +
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRIL--LIGEPLSYWRNLAGEDAICGIYGTQTRR 65
Query: 183 HFTERSVMEKAIK--------DGKFLEFASVHGNLYGTSVEAVEAVA-DAGKRCILDIDV 233
+ S + + L TS + V + K + D
Sbjct: 66 LNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLSDRHP 125
Query: 234 QGARSVRAS------------------------PLDAIFIFICPPSMEELEERLRARGT- 268
+ P + + R+ R
Sbjct: 126 IASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSL--PSHLSRVSKRARP 183
Query: 269 -ETED-QILKRLRNA 281
ET + + LRN
Sbjct: 184 GETVNLPFVMVLRNV 198
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 32.6 bits (72), Expect = 0.055
Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 8/58 (13%)
Query: 27 RDCETTTVIGDKTYVIAGSDESIG---VKIYDRSTGNW-LIPAVRGIEPRPCKGHSAV 80
R TV + YV+ G D V+ YD T W + + G
Sbjct: 233 RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRM----TSGRSGVGVA 286
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 32.0 bits (71), Expect = 0.063
Identities = 17/99 (17%), Positives = 32/99 (32%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+ I G VGK TL++ L+ + S+ T + +G + + +
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 67
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQ 234
+ + VE V V + + D V
Sbjct: 68 KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVL 106
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 32.0 bits (71), Expect = 0.064
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
+ I G G GK TL+ L F + G SV T PR +
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFRAA-GRSV-ATLAFPRYGQSVAADIA 48
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 32.0 bits (71), Expect = 0.075
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 133 EKPVVITGPSGVGKGTLISMLMKEFPSMFGF 163
++ G GK ++I + + E + +
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELNLPYIY 59
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 31.9 bits (72), Expect = 0.085
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 128 VIGNVEKPVV---ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTR 170
++ + +P+V I G GK L++ L GFS+ T +
Sbjct: 24 ILSAITQPMVVVAIVGLYRTGKSYLMNKL---AGKKKGFSLGSTVQ 66
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 31.6 bits (70), Expect = 0.086
Identities = 22/166 (13%), Positives = 35/166 (21%), Gaps = 22/166 (13%)
Query: 138 ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDG 197
I G+G LI L + + EK
Sbjct: 29 IQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTL 88
Query: 198 KFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGA--------------------- 236
V L + V +L A
Sbjct: 89 GVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREP 148
Query: 237 -RSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNA 281
R + ++ PP + L T ++D +L LR +
Sbjct: 149 ERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLS 194
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 31.6 bits (70), Expect = 0.095
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 135 PVV-ITGPSGVGKGTLISMLMKEF 157
PV+ I GPSG GKGTL + +
Sbjct: 4 PVITIDGPSGAGKGTLCKAMAEAL 27
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 31.8 bits (72), Expect = 0.096
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP 158
+ ITG +G GK +L+ +++ E
Sbjct: 65 LAITGSTGSGKTSLLMLILGELE 87
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 31.5 bits (70), Expect = 0.097
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 134 KPVVIT--GPSGVGKGTLISMLMKEF 157
K + I GP+ GK T+ ++ K+F
Sbjct: 2 KTIQIAIDGPASSGKSTVAKIIAKDF 27
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 32.0 bits (72), Expect = 0.098
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPR 173
V +TG +G GK + I+ L G + +
Sbjct: 59 VAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTM 96
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 32.2 bits (72), Expect = 0.099
Identities = 26/253 (10%), Positives = 79/253 (31%), Gaps = 25/253 (9%)
Query: 109 YVREQKKVVGAEVVAWSKG-----VIGNVEKP-------VVITGPSGVGKGTLISMLMKE 156
++R + V G ++ ++ + V P +++ G +G GK L+ L
Sbjct: 14 FLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYT 73
Query: 157 F----PSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKD-GKFLEFASVHGNLYG 211
M + + +KD + + +R+ + ++ ++
Sbjct: 74 GLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVP 133
Query: 212 TSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETE 271
+ R +L + + + +F + + ++L L T
Sbjct: 134 RGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLE----GTL 189
Query: 272 DQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKVICYCLMQISDNLIIFLFVT 331
+ L N + + D + + + + +++ ++ + +F+
Sbjct: 190 AESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRS----WLEDPNGGNLFITWR 245
Query: 332 YPDLTSLLCIETL 344
+L + +
Sbjct: 246 EDMGPALRPLISA 258
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 31.5 bits (70), Expect = 0.10
Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 15/159 (9%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
K + + G G GKGT ++++ +G++ T RA G +MEK
Sbjct: 9 KIIFVVGGPGSGKGTQCEKIVQK----YGYTHLSTGDLLRAEVSSGSARGKMLSEIMEK- 63
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICP 253
L ++ ++ A + +V+ +
Sbjct: 64 ----GQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVD 119
Query: 254 PSMEELEERL------RARGTETEDQILKRLRNAKEEIK 286
E + +RL R + E+ I KRL + +
Sbjct: 120 AGPETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATE 158
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 31.5 bits (71), Expect = 0.10
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 136 VVITGPSGVGKGTLISMLM 154
V+ GP+G GK + ++
Sbjct: 27 CVLLGPTGAGKSVFLELIA 45
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 31.5 bits (70), Expect = 0.10
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 134 KP--VVITGPSGVGKGTLISMLMKEF 157
KP V + G G GKGT + ++++F
Sbjct: 5 KPNVVFVLGGPGSGKGTQCANIVRDF 30
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 31.2 bits (69), Expect = 0.11
Identities = 5/49 (10%), Positives = 14/49 (28%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
+++ G GK T++ E ++ + +
Sbjct: 5 LLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDV 53
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 31.4 bits (71), Expect = 0.11
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ GPSG GK T+ S+L
Sbjct: 31 IAFAGPSGGGKSTIFSLLE 49
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.1 bits (69), Expect = 0.11
Identities = 15/117 (12%), Positives = 31/117 (26%), Gaps = 4/117 (3%)
Query: 135 PVV-ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
P++ SG GK TL+ L+ + G + D + +
Sbjct: 3 PLLAFAAWSGTGKTTLLKKLIPALCAR-GIRPGLIKHTH--HDMDVDKPGKDSYELRKAG 59
Query: 194 IKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIF 250
E ++ A + +D+ + + I +F
Sbjct: 60 AAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLF 116
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 31.2 bits (69), Expect = 0.12
Identities = 11/52 (21%), Positives = 14/52 (26%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTER 187
+ +TG GK + L G SVS E E
Sbjct: 9 IFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTRED 60
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 31.1 bits (69), Expect = 0.12
Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
+ + G G GKGT L+K++ S S RA S + IK
Sbjct: 11 IFVLGGPGAGKGTQCEKLVKDY-SFVHLSAGDLLRA----------EQGRAGSQYGELIK 59
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAI----FIFI 251
+ A+ A K L S I FI
Sbjct: 60 NCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILF 119
Query: 252 CPPSMEELEERLRARGT------ETEDQILKRLRNAKEEIKQG----KSSGIFDHILYND 301
+ + ERL RG + + I KR KE ++ + +
Sbjct: 120 FDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDR 179
Query: 302 KLEECYENLKVI 313
+E+ Y++++
Sbjct: 180 SVEDVYKDVQDA 191
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 31.0 bits (69), Expect = 0.12
Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 12/169 (7%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP----SMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
I G G GKGT+ S + K F S + R + +
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDD 68
Query: 192 KAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFI 251
+ N A+A R V + + +
Sbjct: 69 VMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTV-----INLNVPFEVIKQR 123
Query: 252 CPPSMEELEERLRARGTETEDQILK--RLRNAKEEIKQGKSSGIFDHIL 298
E + +RL+A +TE +L+ R + E +++ I+ H+
Sbjct: 124 LTDRPETVVKRLKAYEAQTE-PVLEYYRKKGVLETFSGTETNKIWPHVY 171
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 31.1 bits (69), Expect = 0.13
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPR 173
+VI G G GK T +++++ + G TR P
Sbjct: 5 IVIEGLEGAGKTTARNVVVETLEQL-GIRDMVFTREPG 41
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 31.2 bits (70), Expect = 0.14
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS-----MFGFSVSHTTRAPRAMEKDGVHYHFTERSV 189
I GPSG GK T + ++ + PS V+ + E + F ++
Sbjct: 34 FGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWAL 93
Query: 190 M 190
Sbjct: 94 Y 94
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 30.8 bits (68), Expect = 0.16
Identities = 14/45 (31%), Positives = 18/45 (40%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKD 178
+ V +TGP GVGK TLI + S T R +
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRR 46
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 30.7 bits (69), Expect = 0.16
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 136 VVITGPSGVGKGTLISMLM 154
V GP+G+GK TL+ +
Sbjct: 30 VNFHGPNGIGKTTLLKTIS 48
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 31.1 bits (70), Expect = 0.16
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAI 194
VV GPSG GK TL+ M+ E + + + GV F ++
Sbjct: 29 VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLS 88
Query: 195 KDGKFLEFASVHGNLYGTSVEAVEAVADA 223
+ G + V VA+
Sbjct: 89 VAENMSFGLKLAGAKKEVINQRVNQVAEV 117
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 30.8 bits (69), Expect = 0.17
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 136 VVITGPSGVGKGTLISMLM 154
VI GP+G GK + ++
Sbjct: 29 FVILGPTGAGKTLFLELIA 47
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 30.9 bits (70), Expect = 0.17
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFG 162
V G SG GK TLI+++ + + G
Sbjct: 47 VAFVGMSGGGKSTLINLIPRFYDVTSG 73
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 30.7 bits (68), Expect = 0.17
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 136 VVITGPSGVGKGTLISMLMKEF 157
+V+ GP G GKGT L + F
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERF 26
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 31.0 bits (70), Expect = 0.17
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP 158
V + G SG GK T+ S++ + +
Sbjct: 44 VALVGRSGSGKSTIASLITRFYD 66
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 30.7 bits (69), Expect = 0.18
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+++ GPSG GK T + M+
Sbjct: 32 MILLGPSGCGKTTTLRMIA 50
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 30.9 bits (70), Expect = 0.18
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+V+ GPSG GK T + M+
Sbjct: 35 LVLLGPSGCGKTTTLRMIA 53
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 30.3 bits (67), Expect = 0.21
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 136 VVITGPSGVGKGTLISMLMKEF 157
V + G G GKGT + +++++
Sbjct: 4 VFVLGGPGAGKGTQCARIVEKY 25
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 30.7 bits (69), Expect = 0.21
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS-----MFGFSVSHTTRAPRAMEKDGVHYHFT 185
+ + GP+G GK TL++ + G + + A+ + + T
Sbjct: 28 LHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQT 82
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 30.6 bits (69), Expect = 0.21
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ I G SG GK T + +
Sbjct: 31 ISIIGSSGSGKSTFLRCIN 49
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 30.3 bits (67), Expect = 0.21
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
+V+ G GK T L++ + G R+ E + +
Sbjct: 6 IVLEGVDRAGKSTQSRKLVEALCAA-GHRAELLRFPERSTEIGKLLSSY 53
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 30.3 bits (67), Expect = 0.22
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 136 VVITGPSGVGKGTLISMLMKEF 157
V+ GP G GKGT L K F
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNF 27
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 30.7 bits (69), Expect = 0.22
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP 158
+ I G SG GK TL ++ + +
Sbjct: 32 IGIVGRSGSGKSTLTKLIQRFYI 54
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.1 bits (66), Expect = 0.23
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMF 161
+ + + GP G GK T+ L ++ F
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEF 30
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 30.2 bits (67), Expect = 0.24
Identities = 27/170 (15%), Positives = 47/170 (27%), Gaps = 43/170 (25%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
VV G G GK T I + + + +D + S + A++
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVSAGYVH-------------VNRDTLGSWQRCVSSCQAALR 63
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
GK + + + + ++ DAG C F +
Sbjct: 64 QGKRVVIDNTN-PDVPSRARYIQCAKDAGVPCR--------------------CFNFCAT 102
Query: 256 MEELEERLRAR------GTETEDQILKRLRNAKEEIKQGKSSGIFDHILY 299
+E+ R R D ++ R E + F IL
Sbjct: 103 IEQARHNNRFREMTDPSHAPVSDMVMFSYRKQFEPPTLAEG---FLEILE 149
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 30.7 bits (68), Expect = 0.25
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 131 NVEKPVVI--TGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGV 180
VE P G G GK +L S + +E + + T + D +
Sbjct: 28 AVESPTAFLLGGQPGSGKTSLRSAIFEETQGNV-IVIDNDTFKQQHPNFDEL 78
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 30.3 bits (68), Expect = 0.28
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP 158
+ GP+G GK T+ ++L +
Sbjct: 43 TALVGPNGSGKSTVAALLQNLYQ 65
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 30.3 bits (68), Expect = 0.28
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+I GP+G GK TLI+++
Sbjct: 33 TLIIGPNGSGKSTLINVIT 51
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 29.9 bits (67), Expect = 0.32
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFG 162
V++TG SG+GK L+ + G
Sbjct: 16 VGVLLTGRSGIGKSECALDLINKNHLFVG 44
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 29.8 bits (66), Expect = 0.33
Identities = 8/42 (19%), Positives = 12/42 (28%), Gaps = 1/42 (2%)
Query: 138 ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDG 179
+ G GK TL+ + G+ V E
Sbjct: 6 VVGYKHSGKTTLMEKWVAAAVRE-GWRVGTVKHHGHGGEPAR 46
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 30.3 bits (68), Expect = 0.33
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 11/63 (17%)
Query: 135 PVV-ITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKA 193
P++ +TG SG G T+ + F G +E D +H R+ M+
Sbjct: 5 PIISVTGSSGAGTSTVKHTFDQIFRRE-GVKAVS-------IEGDA--FHRFNRADMKAE 54
Query: 194 IKD 196
+
Sbjct: 55 LDR 57
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.7 bits (65), Expect = 0.36
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
++ G GK TL+ ML + + T P + E + FT
Sbjct: 3 LLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFT 47
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 29.5 bits (65), Expect = 0.36
Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVM 190
+++ G GK TL+ L E S + ++++ G + +
Sbjct: 19 ILLLGLDNAGKTTLLKQLASEDISHITPTQGFNI---KSVQSQGFKLNVWDIGGQ 70
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 30.1 bits (66), Expect = 0.37
Identities = 8/43 (18%), Positives = 18/43 (41%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAME 176
+ ++ GP G+GK T ++ +E + R+ +
Sbjct: 53 RAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLN 95
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 30.2 bits (66), Expect = 0.37
Identities = 6/64 (9%), Positives = 15/64 (23%)
Query: 130 GNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSV 189
G+ + G G GK + L + + + + ++
Sbjct: 40 GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNI 99
Query: 190 MEKA 193
Sbjct: 100 PFPR 103
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 29.8 bits (66), Expect = 0.38
Identities = 25/208 (12%), Positives = 58/208 (27%), Gaps = 29/208 (13%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSV-----------SHTTRAPRAMEKDGVHYHF 184
V +TG G GK T+ + G +V A A+
Sbjct: 6 VALTGGIGSGKSTVANAFAD-----LGINVIDADIIARQVVEPGAPALHAIADHFGANMI 60
Query: 185 TERSVMEKAIKDGKFLEFASVHGNLYG-----TSVEAVEAVADAGKRCILDIDVQGARSV 239
+++ + L E + A +L + +
Sbjct: 61 AADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENS 120
Query: 240 RASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRN-AKEEIKQGKSSGIFDHIL 298
+ + + E +R R T + + + L A E + + D ++
Sbjct: 121 LYKKANRVLVVDVS--PETQLKRTMQRDDVTREHVEQILAAQATREARLAVA----DDVI 174
Query: 299 YNDK-LEECYENLKVICYCLMQISDNLI 325
N+ + ++ + +Q++ +
Sbjct: 175 DNNGAPDAIASDVARLHAHYLQLASQFV 202
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 29.5 bits (66), Expect = 0.38
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 134 KPVVITGPSGVGKGTLISMLMK 155
V+ITG SG+GK L+K
Sbjct: 16 VGVLITGDSGIGKSETALELIK 37
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 29.9 bits (67), Expect = 0.39
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 136 VVITGPSGVGKGTLISMLM 154
V + G +G GK T +S +
Sbjct: 35 VTLIGANGAGKTTTLSAIA 53
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 29.6 bits (65), Expect = 0.40
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
V+ G VGK L+ FP + +V + + + E
Sbjct: 12 CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQE 68
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 29.2 bits (64), Expect = 0.46
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
+V+ G S GK L+ + K FP + +V A ++ + + S
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSP 61
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.46
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEFPSM 160
K + I G GK T +++L +
Sbjct: 3 KKISIEGNIAAGKSTFVNILKQLCEDW 29
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 29.3 bits (64), Expect = 0.47
Identities = 9/49 (18%), Positives = 16/49 (32%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
V++ G GVGK L + + HT ++ +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLMV 52
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.1 bits (64), Expect = 0.47
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 134 KPVVITGPSGVGKGTLISMLMKEF 157
K +V G G GK TL L K+
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDL 24
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 29.2 bits (64), Expect = 0.48
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Query: 124 WSKGVIGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
+ GN E +++ G GK T++ L ++ + V ++
Sbjct: 3 VLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ---SVTTIPTVGFNVETVTYKNVKFN 59
Query: 184 FTERSVME 191
+ +
Sbjct: 60 VWDVGGQD 67
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.48
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS 159
+ I G VGK T + +L K +P
Sbjct: 5 LSIEGNIAVGKSTFVKLLTKTYPE 28
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 29.3 bits (64), Expect = 0.50
Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
++I G G GK T++ L ++ + + + + +
Sbjct: 8 ILILGLDGAGKTTILYRLQVGE---VVTTIPTIGFNVETVTYKNLKFQVWDLGGLT 60
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 28.9 bits (63), Expect = 0.53
Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
+ I G VGK +L ++ +F + ++ +T + H + + +
Sbjct: 7 IAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 63
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 29.2 bits (65), Expect = 0.54
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ GP+G GK T + ++
Sbjct: 31 FGLIGPNGAGKTTTLRIIS 49
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 29.2 bits (64), Expect = 0.55
Identities = 5/25 (20%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 135 PVVI--TGPSGVGKGTLISMLMKEF 157
P +I +G + GK ++ + +++
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQLL 26
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 29.1 bits (65), Expect = 0.58
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 134 KPVVITGPSGVGKGTLISMLMK 155
V+ITG SGVGK L++
Sbjct: 15 LGVLITGDSGVGKSETALELVQ 36
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 28.8 bits (63), Expect = 0.65
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
V+ G VGK L+ FP + +V A ++ V+ + + E
Sbjct: 8 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQE 64
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 28.8 bits (63), Expect = 0.71
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
+V G VGK +LI+ M F + + ++ + +D
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRL 51
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 28.6 bits (62), Expect = 0.77
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS 159
VVI G GK +L++ L +
Sbjct: 4 VVIAGRPNAGKSSLLNALAGREAA 27
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 28.5 bits (62), Expect = 0.77
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 136 VVITGPSGVGKGTLISMLMKEFP 158
+V G GK TL+ ML +
Sbjct: 16 LVFLGLDNAGKTTLLHMLKDDRL 38
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 28.8 bits (63), Expect = 0.78
Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 26/217 (11%)
Query: 113 QKKVVGAEVVAWSKGVIGNVEKP-VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRA 171
Q+++ V +++ GP G+GK TL ++ E +
Sbjct: 14 QERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEK 73
Query: 172 PRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDI 231
P + + ++++G L +H S +A E + A + ++DI
Sbjct: 74 PGDLAAI-----------LANSLEEGDILFIDEIHRL----SRQAEEHLYPAMEDFVMDI 118
Query: 232 DVQ---GARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQG 288
+ AR++R I L G + A+ ++
Sbjct: 119 VIGQGPAARTIRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDA 178
Query: 289 KSSGIFDHILYNDKLEECYENLKVICYCLMQISDNLI 325
+ G+ EE + M+++ L
Sbjct: 179 RLLGVRIT-------EEAALEIGRRSRGTMRVAKRLF 208
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 29.0 bits (63), Expect = 0.78
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 137 VITGPSGVGKGTLISMLM 154
+I G +G GK +L+ ++
Sbjct: 27 LIIGQNGSGKSSLLDAIL 44
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 28.7 bits (63), Expect = 0.81
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
VV+ G SGVGK L+S + ++ S A R+++ DG
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 56
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 28.5 bits (62), Expect = 0.83
Identities = 10/59 (16%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 131 NVEKPVVI--TGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTER 187
+ + TG SG GK T+ L + + R + + +R
Sbjct: 15 GGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDR 73
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 28.6 bits (63), Expect = 0.87
Identities = 17/139 (12%), Positives = 42/139 (30%), Gaps = 9/139 (6%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAI 194
+++ G GK T++ + G + + D V++H +
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETK-------FQVDKVNFHMFDVGGQRDER 61
Query: 195 KDGK-FLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICP 253
+ + + +S + D + + L I + +
Sbjct: 62 RKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFL 121
Query: 254 PSMEELEERLRARGTETED 272
+ L E++ A ++ ED
Sbjct: 122 NKQDLLAEKVLAGKSKIED 140
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 28.1 bits (62), Expect = 0.87
Identities = 11/49 (22%), Positives = 16/49 (32%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
V + G G GK TL +++ T + YHF
Sbjct: 36 VYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHF 84
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 28.7 bits (63), Expect = 0.91
Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 11/122 (9%)
Query: 127 GVIGNVEKP-VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
G +++ P + + G GK +++ + TR P ++ +
Sbjct: 19 GQNADLDLPQIAVVGGQSAGKSSVLENFVGR--DFLPRGSGIVTRRPLVLQLVNSTTEYA 76
Query: 186 ERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLD 245
E K KF +F V + + V K S L
Sbjct: 77 EFL----HCKGKKFTDFEEVRLEIE----AETDRVTGTNKGISPVPINLRVYSPHVLNLT 128
Query: 246 AI 247
+
Sbjct: 129 LV 130
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 28.2 bits (62), Expect = 0.95
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
+++ G SGVGK ++ + F S F ++ + R +E DG
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKI-RTIELDGKRIKLQ 58
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 28.1 bits (61), Expect = 1.0
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVME 191
+V+ G GVGK L + F + ++ + ++ + + E
Sbjct: 7 LVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQE 63
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 28.2 bits (61), Expect = 1.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS 159
V+I G VGK TL + L+K+ +
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKKKA 26
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 28.4 bits (62), Expect = 1.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
VV G +G GK TL +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRY 23
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 28.1 bits (61), Expect = 1.0
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 132 VEKPVVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVM 190
+ K +VI G GK L+ + K +FP ++ +V A ++ V + + +
Sbjct: 1 IRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGL 60
Query: 191 E 191
E
Sbjct: 61 E 61
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 28.1 bits (61), Expect = 1.1
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 131 NVEKPVVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
N+ K V+I G SGVGK +L+ + ++ + ++
Sbjct: 1 NILK-VIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 54
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 28.2 bits (62), Expect = 1.1
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
+V+ G +GVGK L+ + FP G ++ + +E +G
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMI-KTVEINGEKVKLQ 57
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 28.1 bits (61), Expect = 1.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
++ G S VGK TLI L +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGK 23
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 28.0 bits (61), Expect = 1.1
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 130 GNVEKPVVITGPSGVGKGTLISMLMKEFPS 159
+ E V+I G GK T++
Sbjct: 12 NHQEHKVIIVGLDNAGKTTILYQFSMNEVV 41
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.9 bits (61), Expect = 1.2
Identities = 10/50 (20%), Positives = 15/50 (30%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
+I G GVGK L+ ++ R +E G
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 56
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 28.3 bits (62), Expect = 1.2
Identities = 14/160 (8%), Positives = 39/160 (24%), Gaps = 10/160 (6%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMF--------GFSVSHTTRAPRAMEKDGVHYHFTER 187
++I G GK T ++L K+ + + +
Sbjct: 6 ILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHL 65
Query: 188 SVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAI 247
+ ++ + G VA + + +D+ L
Sbjct: 66 LFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKPD 125
Query: 248 FIFICPPSMEELEERLRARGTETEDQI--LKRLRNAKEEI 285
+ G E + + ++++ ++
Sbjct: 126 LTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 165
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 28.1 bits (61), Expect = 1.3
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 134 KPVVITGPSGVGKGTLISMLMKE 156
+ V+ G GK L L+
Sbjct: 1 RAVLFVGLCDSGKTLLFVRLLTG 23
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 28.3 bits (63), Expect = 1.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 129 IGNVEKPVVITGPSGVGKGTL 149
I E PV+ITG SGVGK +
Sbjct: 19 ISCAECPVLITGESGVGKEVV 39
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 27.7 bits (60), Expect = 1.3
Identities = 4/21 (19%), Positives = 10/21 (47%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+ + G GK T ++++
Sbjct: 5 LTLVGLQYSGKTTFVNVIASG 25
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 27.7 bits (60), Expect = 1.3
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
+V+ G GVGK L ++ F S + ++ + +++
Sbjct: 9 LVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDI 58
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 27.8 bits (60), Expect = 1.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
V I G VGK TL++ L+
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGV 28
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 27.7 bits (60), Expect = 1.4
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+++ G GK T++ L
Sbjct: 3 ILMVGLDAAGKTTILYKLKLG 23
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 27.7 bits (60), Expect = 1.4
Identities = 7/50 (14%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
+V+ G + VGK +++ + +F ++ R +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFE 55
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.7 bits (60), Expect = 1.4
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMF 161
+V+ G G GK T + + EF +
Sbjct: 6 LVLVGDGGTGKTTFVKRHLTGEFEKKY 32
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 28.1 bits (61), Expect = 1.5
Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
++I GP GK +L+++L + D T
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSV------RPTVVSQEPLSAADYDGSGVTLVDFPGHVKL 59
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVAD 222
K ++ + V++ D
Sbjct: 60 RYKLSDYLKTRAKFVKGLIFMVDSTVD 86
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 27.6 bits (60), Expect = 1.5
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFTE 186
VV+ G GVGK L + F + ++ R ++ +
Sbjct: 6 VVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILD 57
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 27.6 bits (60), Expect = 1.5
Identities = 8/49 (16%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
V++ G GVGK +L++ + +F + ++
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTM 57
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 27.7 bits (60), Expect = 1.5
Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
V + G +GVGK +++ ++ F ++ + ++ +H
Sbjct: 7 VCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKF 55
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 28.0 bits (61), Expect = 1.5
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSV 165
+++ G GK T++ + + G
Sbjct: 5 LLLLGAGESGKSTIVKQMKIIHEAGTGIVE 34
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 27.9 bits (62), Expect = 1.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ G SG GK TLI +
Sbjct: 34 YGVIGASGAGKSTLIRCVN 52
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/148 (10%), Positives = 31/148 (20%), Gaps = 1/148 (0%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK 195
G G GK ++ + + + + Y TE + + I
Sbjct: 37 TEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERIM 96
Query: 196 DGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPS 255
L T V I+ + + +
Sbjct: 97 QMAEHAGIDGQTVLDNTFVARAYNSDMQML-FAEKIEDLIQEGNNIKLVVIDSLTSTFRN 155
Query: 256 MEELEERLRARGTETEDQILKRLRNAKE 283
+L R + + + A
Sbjct: 156 EYTGRGKLAERQQKLGRHMATLNKLADL 183
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.7 bits (60), Expect = 1.7
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
V+I G SGVGK +L++ + +F + + ++ M D +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 53
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 27.9 bits (62), Expect = 1.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 136 VVITGPSGVGKGTLISMLM 154
V I GPSG GK T+++++
Sbjct: 34 VSIMGPSGSGKSTMLNIIG 52
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 27.7 bits (60), Expect = 1.8
Identities = 22/175 (12%), Positives = 50/175 (28%), Gaps = 9/175 (5%)
Query: 137 VITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKD 196
++G +G GK T ++ + ++ T + + + +K
Sbjct: 28 TLSGGNGAGKSTTMAAFV---TALIPDL----TLLHFRNTTEAGATSGSRDKGLHGKLKA 80
Query: 197 GKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSM 256
G + + V V AG+ +DI + + S +
Sbjct: 81 GVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNER 140
Query: 257 EELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 311
+ L + E + + + S +FD + +L + K
Sbjct: 141 QARVLPLNELKDKLEAMEGVQFK--QFNSITDYHSLMFDLGIIARRLRSASDRSK 193
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 27.9 bits (61), Expect = 1.9
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+++ G GVGK + ++ ++ E
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGE 55
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 27.5 bits (60), Expect = 2.0
Identities = 24/190 (12%), Positives = 62/190 (32%), Gaps = 21/190 (11%)
Query: 136 VVITGPSGVGKGTLISMLMKE-FPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAI 194
V +TG G GK T+ ++ P + V+ A + + HF + + E+
Sbjct: 5 VGLTGGIGSGKTTIANLFTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILTEQGE 64
Query: 195 KDGKFLEFASVHGNLYGTSVEAV-----------EAVADAGKRCILDIDVQGARSVRASP 243
+ L + + + + + + + + + A
Sbjct: 65 LNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIENKLTALC 124
Query: 244 LDAIFIFICPPSMEELEERLRARGTETEDQILKRLRN-AKEEIKQGKSSGIFDHILYNDK 302
+ + + + R R +QI + + + ++ + + D ++ ND
Sbjct: 125 DRILVVDVS---PQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLKWA----DDVINNDA 177
Query: 303 -LEECYENLK 311
L + +L+
Sbjct: 178 ELAQNLPHLQ 187
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.4 bits (59), Expect = 2.0
Identities = 8/49 (16%), Positives = 16/49 (32%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
+V+ G VGK ++I K + R ++ +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL 53
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 27.3 bits (59), Expect = 2.0
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFG 162
V I G VGK TL + ++ + ++
Sbjct: 11 VAIVGRPNVGKSTLFNAILNKERALVS 37
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.2 bits (59), Expect = 2.1
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
V++ G GVGK L M EF
Sbjct: 7 VIMVGSGGVGKSALTLQFMYDEFVE 31
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 27.5 bits (60), Expect = 2.1
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 12/137 (8%)
Query: 134 KPVVI--TGPSGVGKGTLISMLMKEFPSMFGFSV--SHTTRAPRAMEKDGVHYHFTERSV 189
+ + I TG S GK TL L + + KD
Sbjct: 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNEN 82
Query: 190 MEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFI 249
+ + + K ++ S + R + A + L + +
Sbjct: 83 IRRIAEVAKLFADSNSIAITSFISPYRKD-------RDTARQLHEVATPGEETGLPFVEV 135
Query: 250 FICPPSMEELEERLRAR 266
++ P +E E+R
Sbjct: 136 YVDVP-VEVAEQRDPKG 151
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.2 bits (59), Expect = 2.2
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 136 VVITGPSGVGKGTLISMLMK 155
++ G SGVGK T +
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 27.2 bits (59), Expect = 2.3
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFG-FSVSHTTRAPRAMEKDGVHYHFTERSVMEKAI 194
+VI G VGK TL++ L+ E ++ + + G+ + + + +
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSET 62
Query: 195 KD 196
D
Sbjct: 63 ND 64
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 2.3
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYH 183
+V+ G S VGK +L+ +K +F ++ D
Sbjct: 9 LVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF 57
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 27.3 bits (59), Expect = 2.3
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
V+ G G GK T+ L K G + T A + F
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKA----LGVGLLDTDVAIEQRTGRSIADIF 48
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 114
Score = 26.6 bits (58), Expect = 2.4
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 256 MEELEERLRARGTETEDQILKR 277
E L + E E QIL R
Sbjct: 92 WELLLTTIARTINEVETQILTR 113
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54
(NtrC1), N-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 137
Score = 26.9 bits (59), Expect = 2.4
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 239 VRASPLDAIFIFICPPSMEELEERLRA----RGTETEDQILKRLRNAKEE 284
V A + A P +EE+E + R E+++L+R ++ KEE
Sbjct: 88 VEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEE 137
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 27.3 bits (59), Expect = 2.5
Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
V+ G VGK L+ +FPS
Sbjct: 6 CVVVGDGAVGKTCLLISYTTNKFPS 30
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 27.2 bits (59), Expect = 2.5
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS 159
++I G G GK T++ L
Sbjct: 20 ILILGLDGAGKTTILYRLQIGEVV 43
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 2.6
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
V + G GVGK +L+ +K F
Sbjct: 5 VAVFGAGGVGKSSLVLRFVKGTFRE 29
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain
{Caulobacter crescentus [TaxId: 155892]}
Length = 139
Score = 26.7 bits (58), Expect = 2.7
Identities = 22/144 (15%), Positives = 40/144 (27%), Gaps = 22/144 (15%)
Query: 150 ISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDG-KFLEFASVHGN 208
L++ + + VS P A+ + DG
Sbjct: 13 NVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPT 72
Query: 209 LYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGT 268
V + A+ G R ++ A P L R+R+
Sbjct: 73 TRHIPVVLITALDGRGDR------------IQGLESGASDFLTKPIDDVMLFARVRS--- 117
Query: 269 ETEDQILKRLRNAKEEIKQGKSSG 292
L R + +E++Q ++SG
Sbjct: 118 ------LTRFKLVIDELRQREASG 135
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 27.4 bits (59), Expect = 2.7
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 130 GNVEKPVVITGPSGVGKGTLISMLMKEFPSMFG 162
+V G G+GK TL +K
Sbjct: 43 SDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAA 75
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 26.9 bits (58), Expect = 2.9
Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+ I G +GVGK L+ + F
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIW 29
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens)
[TaxId: 9606]}
Length = 90
Score = 25.8 bits (56), Expect = 2.9
Identities = 7/49 (14%), Positives = 13/49 (26%), Gaps = 2/49 (4%)
Query: 154 MKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIK--DGKFL 200
+ + S G S F E A+ +G+ +
Sbjct: 25 ILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKI 73
>d1nsca_ b.68.1.1 (A:) Influenza neuraminidase {Influenza B virus,
different strains [TaxId: 11520]}
Length = 390
Score = 27.1 bits (60), Expect = 3.0
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 8 IVDNLQNGNGFSNGFSLKSRDC 29
++ +++ +S GF +K + C
Sbjct: 323 VMVSMKEPGWYSFGFEIKDKKC 344
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 26.7 bits (58), Expect = 3.0
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTR 170
++I G SGVGK +L+ F ++ +
Sbjct: 10 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFK 45
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.9 bits (58), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+V+ G GVGK L L++ F
Sbjct: 6 LVVVGAGGVGKSALTIQLIQNHFVD 30
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 26.8 bits (58), Expect = 3.1
Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 135 PV-VITGPSGVGKGTLISMLMKE 156
V ++TG G GK TL+ ++ E
Sbjct: 4 AVTLLTGFLGAGKTTLLRHILNE 26
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 3.2
Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+++ G S VGK L FP
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPD 29
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 3.3
Identities = 9/51 (17%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHFT 185
+V+ G GVGK L ++ F + ++ + R ++
Sbjct: 6 LVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEIL 56
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 26.8 bits (58), Expect = 3.3
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
++I G S VGK + + +
Sbjct: 8 ILIIGNSSVGKTSFLFRYADD 28
>d1jx4a2 e.8.1.7 (A:1-240) DinB homolog (DBH) {Archaeon Sulfolobus
solfataricus, DNA polymerase IV [TaxId: 2287]}
Length = 240
Score = 26.8 bits (58), Expect = 3.5
Identities = 9/59 (15%), Positives = 14/59 (23%), Gaps = 7/59 (11%)
Query: 15 GNGFSNGFSLKSRDCETTTVIGDKTYVIAGSDESIGVKIYDRSTGNWLIPAVRGIEPRP 73
G G LK + D + + + +LI R P
Sbjct: 185 GIGNITAEKLKKLGINK---LVD----TLSIEFDKLKGMIGEAKAKYLISLARDEYNEP 236
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.6 bits (57), Expect = 3.6
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPSMFGFSVSHTTRAPRAMEKDGVHYHF 184
VV+ G GVGK TL ++ V R + DG
Sbjct: 6 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATI 55
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.4 bits (57), Expect = 3.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
V++ G SGVGK L+
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDG 29
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 26.4 bits (57), Expect = 3.7
Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
++ G +G GK L+ ++ +F
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKKFKD 32
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.4 bits (57), Expect = 3.9
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
VV+ G VGK +L+ + +F
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENKFND 30
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 26.3 bits (57), Expect = 4.0
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+++ G SGVGK L+ +++
Sbjct: 5 ILLIGDSGVGKSCLLVRFVED 25
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 4.1
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+V+ G GVGK L ++ F +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVT 32
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 26.4 bits (57), Expect = 4.2
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+++ G SGVGK L+ + +
Sbjct: 9 LLLIGNSGVGKSCLLLRFSDDTYTN 33
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 26.8 bits (58), Expect = 4.3
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 110 VREQKKVVGAEVVAWSKGVIGNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTT 169
+ Q+ + A ++ IG V ++ G G GK T + L P + +
Sbjct: 9 IVGQEDMKLALLLTAVDPGIGGV----LVFGDRGTGKSTAVRALAALLPEIEAVEGCPVS 64
Query: 170 RAPRAMEKDGVHYHFTE 186
M D T
Sbjct: 65 SPNVEMIPDWATVLSTN 81
>d1jv2a4 b.69.8.1 (A:1-438) Integrin alpha N-terminal domain {Human
(Homo sapiens), isoform V [TaxId: 9606]}
Length = 438
Score = 26.9 bits (58), Expect = 4.4
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 15/35 (42%)
Query: 132 VEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVS 166
V+ P +GP G S FGF+V
Sbjct: 5 VDSPAEYSGPEG---------------SYFGFAVD 24
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 26.5 bits (57), Expect = 4.5
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 136 VVITGPSGVGKGTLISMLMKEF 157
+V+ G GK + L +
Sbjct: 5 IVMVGLPARGKTYISKKLTRYL 26
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 26.7 bits (59), Expect = 4.6
Identities = 7/64 (10%), Positives = 15/64 (23%), Gaps = 7/64 (10%)
Query: 138 ITGPSGVGKGTLISMLMKEFPSMFG-------FSVSHTTRAPRAMEKDGVHYHFTERSVM 190
I G GK ++ + + + + T+ M
Sbjct: 73 IIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAM 132
Query: 191 EKAI 194
+ I
Sbjct: 133 KYTI 136
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 26.3 bits (56), Expect = 4.7
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ + G S VGK + I+ L+
Sbjct: 26 IALAGRSNVGKSSFINSLI 44
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 26.1 bits (56), Expect = 4.7
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+ + G + GK +LI +
Sbjct: 8 LGVLGDARSGKSSLIHRFLTG 28
>d2b0va1 d.113.1.1 (A:4-149) Hypothetical protein NE0184
{Nitrosomonas europaea [TaxId: 915]}
Length = 146
Score = 25.9 bits (56), Expect = 4.8
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 72 RPCKGHSAVLLNEDRILVIKKGSSSDDCLWFL 103
+P +AV+ +D+ L++++
Sbjct: 1 KPNVTVAAVIEQDDKYLLVEEIPRGTAIKLNQ 32
>d1ckqa_ c.52.1.1 (A:) Restriction endonuclease EcoRI {Escherichia
coli [TaxId: 562]}
Length = 261
Score = 26.4 bits (58), Expect = 4.8
Identities = 16/106 (15%), Positives = 27/106 (25%), Gaps = 26/106 (24%)
Query: 149 LISMLMKEFPSMFGFSVSHTTRAPRAM---------EKDGVHYHFTERSVMEKAIKDGKF 199
+ L E+P S + + G + S+ DG
Sbjct: 26 VKKALSNEYP---QLSFRYRDSIKKTEINEALKKIDPDLGGTLFVSNSSI----KPDGGI 78
Query: 200 LEFASVHGNLY----------GTSVEAVEAVADAGKRCILDIDVQG 235
+E +G G + + GKR D+ G
Sbjct: 79 VEVKDDYGEWRVVLVAEAKHQGKDIINIRNGLLVGKRGDQDLMAAG 124
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.0 bits (56), Expect = 5.0
Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 136 VVITGPSGVGKGTLISMLMK-EFPS 159
+I G +GVGK L+ F
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQP 30
>d1iq8a1 c.1.20.1 (A:6-360) Archaeosine tRNA-guanine
transglycosylase, N-terminal domain {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 355
Score = 26.3 bits (57), Expect = 5.4
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 180 VHYHFTERSVMEKAIKDGKFLEFA 203
+ E +++AIK+G+
Sbjct: 304 LWVIKEEIKRVKQAIKEGELWRLV 327
>d1di0a_ c.16.1.1 (A:) Lumazine synthase {Brucella abortus [TaxId:
235]}
Length = 148
Score = 25.7 bits (56), Expect = 5.5
Identities = 6/58 (10%), Positives = 16/58 (27%), Gaps = 4/58 (6%)
Query: 257 EELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKVIC 314
++ + R L E++ G ++ L+ L ++
Sbjct: 14 ADIVDEARKSFVAE----LAAKTGGSVEVEIFDVPGAYEIPLHAKTLARTGRYAAIVG 67
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS)
{Escherichia coli [TaxId: 562]}
Length = 162
Score = 25.8 bits (56), Expect = 5.6
Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 5/89 (5%)
Query: 257 EELEERLRARGTETEDQILK-RLRNAKEEIKQ--GKSSGIFDHILYN--DKLEECYENLK 311
+L + + A EI ++ D K E +L+
Sbjct: 27 PQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQ 86
Query: 312 VICYCLMQISDNLIIFLFVTYPDLTSLLC 340
IC + + L+ +L P LT
Sbjct: 87 AICSMGINLFRVLMTYLKPVLPKLTERAE 115
>d1tyea_ b.69.8.1 (A:) Integrin alpha N-terminal domain {Human (Homo
sapiens), isoform IIb [TaxId: 9606]}
Length = 452
Score = 26.5 bits (57), Expect = 5.9
Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 15/35 (42%)
Query: 132 VEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVS 166
+ GP+G S FGFS+
Sbjct: 5 PVQLTFYAGPNG---------------SQFGFSLD 24
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 25.9 bits (55), Expect = 6.5
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 136 VVITGPSGVGKGTLISMLMK 155
V G S GK + ++ L
Sbjct: 19 VAFAGRSNAGKSSALNTLTN 38
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 25.8 bits (55), Expect = 7.1
Identities = 7/43 (16%), Positives = 18/43 (41%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKD 178
V + G GK +L++ + + P + + + + +E
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVS 46
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 25.7 bits (55), Expect = 7.6
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 136 VVITGPSGVGKGTLISMLMKE 156
+++ G GK T I +
Sbjct: 5 LLLLGTGESGKSTFIKQMRII 25
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 25.8 bits (55), Expect = 7.6
Identities = 6/19 (31%), Positives = 7/19 (36%)
Query: 136 VVITGPSGVGKGTLISMLM 154
+ P G GK L L
Sbjct: 32 GALVSPGGAGKSMLALQLA 50
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 25.7 bits (55), Expect = 7.8
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 14/156 (8%)
Query: 113 QKKVVGAEVVAWSKGVI-GNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRA 171
Q+ V +A + G V V++ GP G+GK TL ++ E + +
Sbjct: 14 QENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK 73
Query: 172 PRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDI 231
M + +++ G L +H L E + + + + I+
Sbjct: 74 QGDMAA------------ILTSLERGDVLFIDEIH-RLNKAVEELLYSAIEDFQIDIMIG 120
Query: 232 DVQGARSVRASPLDAIFIFICPPSMEELEERLRARG 267
A+S+R + S G
Sbjct: 121 KGPSAKSIRIDIQPFTLVGATTRSGLLSSPLRSRFG 156
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 25.7 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 136 VVITGPSGVGKGTLISMLMKEFPS 159
V + G VGK TL+S++ P
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPK 27
>d2aepa1 b.68.1.1 (A:83-469) Influenza neuraminidase {Influenza A
virus, different strains [TaxId: 11320]}
Length = 387
Score = 26.0 bits (57), Expect = 8.6
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 8 IVDNLQNGNGFSNGFSLKSRDC 29
IVD N +G+S FS++ + C
Sbjct: 315 IVDR-GNRSGYSGIFSVEGKSC 335
>d1tyeb2 c.62.1.1 (B:107-354) Integrin beta A domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 248
Score = 25.8 bits (56), Expect = 8.7
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 243 PLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDK 302
P+D ++ SM++ ++ G ++ ++R ++ G D +
Sbjct: 5 PVDIYYLMDLSYSMKDDLWSIQNLG----TKLATQMRKLTSNLRIG-FGAFVDKPVSPYM 59
Query: 303 LEECYENLKVICY 315
E L+ CY
Sbjct: 60 YISPPEALENPCY 72
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 26.0 bits (55), Expect = 8.8
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 137 VITGPSGVGKGTLI 150
+I G +G GK +L+
Sbjct: 27 LIIGQNGSGKSSLL 40
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 25.4 bits (54), Expect = 9.9
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 113 QKKVVGAEVVAWSKGVIGNVEKPVVITGPSGVGKGTLISMLMKEF 157
Q V + ++ + GP G GK + I L KE
Sbjct: 17 QDHAVTVLKKTLKSANLPHM----LFYGPPGTGKTSTILALTKEL 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.404
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,295,703
Number of extensions: 62534
Number of successful extensions: 495
Number of sequences better than 10.0: 1
Number of HSP's gapped: 480
Number of HSP's successfully gapped: 204
Length of query: 346
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 260
Effective length of database: 1,226,816
Effective search space: 318972160
Effective search space used: 318972160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.2 bits)