Query 019064
Match_columns 346
No_of_seqs 254 out of 2285
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 06:23:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019064.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019064hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 8.3E-58 1.8E-62 455.9 25.3 330 10-344 32-371 (571)
2 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.2E-40 4.9E-45 336.1 22.6 267 29-343 1-274 (654)
3 COG3104 PTR2 Dipeptide/tripept 100.0 4.8E-39 1.1E-43 308.2 18.5 287 10-340 16-314 (498)
4 PRK10207 dipeptide/tripeptide 100.0 1.7E-29 3.6E-34 251.0 25.4 194 8-223 7-200 (489)
5 TIGR00924 yjdL_sub1_fam amino 100.0 5E-29 1.1E-33 247.0 25.7 198 9-228 4-203 (475)
6 PRK15462 dipeptide/tripeptide 100.0 1.5E-27 3.2E-32 235.3 25.0 191 10-222 4-194 (493)
7 PF00854 PTR2: POT family; In 100.0 2.2E-29 4.7E-34 242.1 9.7 239 82-341 1-242 (372)
8 PRK09584 tppB putative tripept 99.9 3.6E-26 7.7E-31 227.9 25.0 280 11-340 17-306 (500)
9 KOG1330 Sugar transporter/spin 99.7 5.3E-17 1.1E-21 154.9 9.0 206 12-244 30-244 (493)
10 PRK10054 putative transporter; 99.7 4.6E-15 1E-19 143.8 18.3 176 10-212 2-177 (395)
11 PF07690 MFS_1: Major Facilita 99.6 1.6E-14 3.4E-19 135.9 17.6 166 21-212 2-167 (352)
12 PRK12382 putative transporter; 99.6 3.6E-14 7.8E-19 136.8 20.0 182 5-204 5-186 (392)
13 PRK03545 putative arabinose tr 99.6 3.6E-14 7.8E-19 136.9 18.9 175 12-213 6-180 (390)
14 PRK11646 multidrug resistance 99.6 4.5E-14 9.8E-19 137.1 19.2 168 18-212 13-180 (400)
15 TIGR00900 2A0121 H+ Antiporter 99.6 5.1E-14 1.1E-18 133.0 17.3 174 19-214 3-176 (365)
16 TIGR00891 2A0112 putative sial 99.6 8.1E-14 1.8E-18 133.8 18.5 178 5-209 2-181 (405)
17 PRK10213 nepI ribonucleoside t 99.6 9.6E-14 2.1E-18 134.5 19.1 176 10-212 15-190 (394)
18 TIGR02332 HpaX 4-hydroxyphenyl 99.6 7.5E-14 1.6E-18 136.1 17.5 175 12-213 5-185 (412)
19 TIGR00710 efflux_Bcr_CflA drug 99.6 1.4E-13 2.9E-18 131.6 19.0 176 13-215 3-178 (385)
20 PRK15403 multidrug efflux syst 99.6 1.9E-13 4.1E-18 133.3 19.3 147 42-214 42-188 (413)
21 PRK10504 putative transporter; 99.6 1.1E-13 2.4E-18 136.8 17.9 179 13-218 8-186 (471)
22 PRK05122 major facilitator sup 99.6 2.4E-13 5.3E-18 131.2 19.6 177 13-207 13-189 (399)
23 PRK15402 multidrug efflux syst 99.6 1.8E-13 3.9E-18 132.7 18.4 175 13-214 8-185 (406)
24 PRK11652 emrD multidrug resist 99.6 2.2E-13 4.9E-18 131.4 18.6 174 10-210 3-176 (394)
25 PRK14995 methyl viologen resis 99.5 2.6E-13 5.6E-18 135.4 18.5 177 13-215 4-180 (495)
26 PRK11551 putative 3-hydroxyphe 99.5 4.8E-13 1E-17 129.4 18.7 177 8-211 8-184 (406)
27 PRK11663 regulatory protein Uh 99.5 2.6E-13 5.6E-18 133.1 16.9 166 17-209 25-190 (434)
28 PRK12307 putative sialic acid 99.5 4.5E-13 9.7E-18 130.4 17.3 168 11-205 14-181 (426)
29 TIGR00886 2A0108 nitrite extru 99.5 9.5E-13 2.1E-17 125.1 17.7 164 16-205 2-176 (366)
30 PRK10091 MFS transport protein 99.5 8.4E-13 1.8E-17 127.2 17.3 174 14-214 2-175 (382)
31 TIGR00903 2A0129 major facilit 99.5 9.8E-13 2.1E-17 126.4 17.7 150 36-212 11-160 (368)
32 PRK10406 alpha-ketoglutarate t 99.5 1.8E-12 4E-17 126.9 19.8 169 22-209 29-211 (432)
33 PRK03893 putative sialic acid 99.5 8E-13 1.7E-17 131.3 17.4 170 11-207 16-185 (496)
34 TIGR00895 2A0115 benzoate tran 99.5 7.2E-13 1.6E-17 126.6 16.1 173 12-211 14-186 (398)
35 TIGR00711 efflux_EmrB drug res 99.5 5.8E-13 1.3E-17 131.6 15.8 172 16-214 3-174 (485)
36 PRK10133 L-fucose transporter; 99.5 4.2E-12 9.1E-17 124.8 20.9 156 10-189 21-176 (438)
37 cd06174 MFS The Major Facilita 99.5 1.9E-12 4.1E-17 121.1 17.5 169 18-213 2-170 (352)
38 TIGR00897 2A0118 polyol permea 99.5 3.1E-12 6.8E-17 124.1 19.5 172 7-201 5-177 (402)
39 TIGR00805 oat sodium-independe 99.5 6.8E-13 1.5E-17 136.0 15.3 199 10-215 27-279 (633)
40 PRK11043 putative transporter; 99.5 2.3E-12 5.1E-17 124.6 18.3 170 19-214 7-178 (401)
41 PRK03699 putative transporter; 99.5 4.2E-12 9.1E-17 122.8 20.1 175 11-212 3-178 (394)
42 TIGR00899 2A0120 sugar efflux 99.5 2.5E-12 5.4E-17 122.5 18.0 170 21-214 3-173 (375)
43 TIGR00893 2A0114 d-galactonate 99.5 9E-13 2E-17 125.2 14.6 152 37-214 15-166 (399)
44 TIGR00890 2A0111 Oxalate/Forma 99.5 2E-12 4.3E-17 122.5 16.8 150 36-212 23-172 (377)
45 PRK11102 bicyclomycin/multidru 99.5 2E-12 4.2E-17 123.7 16.5 153 34-213 10-162 (377)
46 PRK09705 cynX putative cyanate 99.5 2.3E-12 4.9E-17 124.8 17.1 161 23-211 17-178 (393)
47 PRK09874 drug efflux system pr 99.5 3.9E-12 8.5E-17 122.8 18.8 171 15-213 14-189 (408)
48 PRK10473 multidrug efflux syst 99.4 6.2E-12 1.3E-16 121.2 19.2 166 20-212 8-173 (392)
49 COG2814 AraJ Arabinose efflux 99.4 7E-12 1.5E-16 119.7 18.7 182 10-218 8-189 (394)
50 TIGR00885 fucP L-fucose:H+ sym 99.4 9.2E-12 2E-16 121.4 19.3 173 17-213 5-203 (410)
51 PRK03633 putative MFS family t 99.4 5.8E-12 1.3E-16 121.2 17.7 155 14-195 5-159 (381)
52 PRK15011 sugar efflux transpor 99.4 1.3E-11 2.7E-16 119.5 20.0 184 5-214 5-191 (393)
53 TIGR00881 2A0104 phosphoglycer 99.4 1.4E-12 3E-17 123.6 12.6 151 37-213 16-167 (379)
54 PRK11195 lysophospholipid tran 99.4 1.1E-11 2.3E-16 120.2 18.6 166 15-211 3-168 (393)
55 PRK10489 enterobactin exporter 99.4 5.3E-12 1.1E-16 122.9 16.2 176 17-214 19-194 (417)
56 TIGR01299 synapt_SV2 synaptic 99.4 6E-12 1.3E-16 130.3 16.8 154 35-214 186-352 (742)
57 PRK09528 lacY galactoside perm 99.4 1E-11 2.2E-16 121.1 17.1 183 14-217 9-191 (420)
58 TIGR00894 2A0114euk Na(+)-depe 99.4 9.4E-12 2E-16 122.9 17.1 145 45-213 70-215 (465)
59 PRK03699 putative transporter; 99.4 9.5E-12 2.1E-16 120.3 16.8 171 14-211 204-374 (394)
60 TIGR00879 SP MFS transporter, 99.4 5E-12 1.1E-16 123.4 15.0 143 48-213 68-213 (481)
61 TIGR00882 2A0105 oligosacchari 99.4 1.6E-11 3.5E-16 118.7 17.7 178 15-213 2-179 (396)
62 PLN00028 nitrate transmembrane 99.4 2E-11 4.3E-16 121.3 18.7 173 12-212 33-214 (476)
63 PRK10642 proline/glycine betai 99.4 1.8E-11 3.8E-16 122.1 18.2 176 14-208 15-204 (490)
64 TIGR00892 2A0113 monocarboxyla 99.4 1.2E-11 2.5E-16 122.3 16.7 149 40-215 43-192 (455)
65 PRK09556 uhpT sugar phosphate 99.4 2.1E-11 4.6E-16 120.7 17.2 176 15-214 258-446 (467)
66 COG2271 UhpC Sugar phosphate p 99.4 1.2E-11 2.5E-16 117.5 14.4 177 15-214 252-431 (448)
67 PRK10077 xylE D-xylose transpo 99.4 2.1E-11 4.6E-16 120.5 16.2 152 46-212 50-210 (479)
68 PRK15011 sugar efflux transpor 99.3 6.9E-11 1.5E-15 114.3 19.1 174 14-214 215-388 (393)
69 PRK11273 glpT sn-glycerol-3-ph 99.3 4.9E-11 1.1E-15 117.6 18.3 169 18-209 28-200 (452)
70 PRK09556 uhpT sugar phosphate 99.3 6.7E-12 1.4E-16 124.3 12.0 150 39-209 52-204 (467)
71 TIGR00712 glpT glycerol-3-phos 99.3 3.2E-11 6.9E-16 118.4 15.9 152 38-212 49-201 (438)
72 PRK10642 proline/glycine betai 99.3 8.8E-11 1.9E-15 117.0 19.2 176 14-212 249-425 (490)
73 PRK05122 major facilitator sup 99.3 7.3E-11 1.6E-15 114.0 18.0 173 24-225 225-397 (399)
74 cd06174 MFS The Major Facilita 99.3 9.1E-11 2E-15 109.7 18.1 174 15-214 175-349 (352)
75 TIGR00890 2A0111 Oxalate/Forma 99.3 5.4E-11 1.2E-15 112.7 16.5 171 15-210 205-375 (377)
76 TIGR00887 2A0109 phosphate:H+ 99.3 1.1E-10 2.4E-15 116.6 19.0 179 13-211 14-219 (502)
77 PRK09952 shikimate transporter 99.3 9.9E-11 2.1E-15 115.0 18.2 177 13-208 20-211 (438)
78 PRK15075 citrate-proton sympor 99.3 1.6E-10 3.4E-15 113.4 18.7 175 11-204 11-199 (434)
79 PRK08633 2-acyl-glycerophospho 99.3 1.3E-10 2.7E-15 126.9 19.7 156 14-192 8-165 (1146)
80 PRK06814 acylglycerophosphoeth 99.3 2E-10 4.3E-15 125.5 20.9 165 21-210 21-188 (1140)
81 TIGR00899 2A0120 sugar efflux 99.3 1.7E-10 3.8E-15 109.8 17.6 171 17-214 201-371 (375)
82 TIGR00896 CynX cyanate transpo 99.3 4.8E-11 1E-15 113.5 13.7 157 26-210 10-168 (355)
83 PRK09705 cynX putative cyanate 99.3 3.1E-10 6.6E-15 109.9 19.4 177 14-217 204-381 (393)
84 TIGR01301 GPH_sucrose GPH fami 99.3 2.8E-10 6.1E-15 112.4 19.3 198 16-220 5-221 (477)
85 PRK09952 shikimate transporter 99.3 3.1E-10 6.8E-15 111.5 19.5 179 15-215 250-431 (438)
86 TIGR00792 gph sugar (Glycoside 99.3 1.9E-10 4.2E-15 112.2 17.4 175 24-216 8-193 (437)
87 COG2271 UhpC Sugar phosphate p 99.3 5E-11 1.1E-15 113.3 12.2 177 16-218 26-208 (448)
88 TIGR00898 2A0119 cation transp 99.3 2.1E-10 4.6E-15 114.4 17.3 146 40-214 113-261 (505)
89 PRK11273 glpT sn-glycerol-3-ph 99.2 2.1E-10 4.5E-15 113.1 16.6 176 15-213 253-431 (452)
90 TIGR00806 rfc RFC reduced fola 99.2 3.7E-10 8E-15 110.1 17.3 174 12-215 23-201 (511)
91 TIGR00901 2A0125 AmpG-related 99.2 3.3E-10 7.1E-15 107.7 16.6 157 34-214 6-175 (356)
92 PRK11902 ampG muropeptide tran 99.2 9.1E-10 2E-14 106.8 19.7 169 20-213 4-178 (402)
93 PRK09874 drug efflux system pr 99.2 3.7E-10 8E-15 109.0 16.7 170 20-215 224-396 (408)
94 PRK11010 ampG muropeptide tran 99.2 1.1E-09 2.5E-14 109.2 20.5 178 13-215 10-193 (491)
95 PRK15034 nitrate/nitrite trans 99.2 1.1E-09 2.4E-14 107.7 19.5 179 15-216 34-231 (462)
96 KOG3764 Vesicular amine transp 99.2 7.5E-11 1.6E-15 111.1 10.2 166 45-235 100-268 (464)
97 TIGR00891 2A0112 putative sial 99.2 3.9E-10 8.4E-15 108.2 15.4 160 17-201 240-400 (405)
98 TIGR00883 2A0106 metabolite-pr 99.2 3.3E-10 7.2E-15 107.9 14.8 167 15-204 219-388 (394)
99 PRK03545 putative arabinose tr 99.2 1.5E-09 3.4E-14 104.6 19.4 174 17-217 207-380 (390)
100 PRK03893 putative sialic acid 99.2 5.3E-10 1.1E-14 111.1 16.6 150 33-206 293-442 (496)
101 PRK11663 regulatory protein Uh 99.2 8.1E-10 1.7E-14 108.4 17.7 177 15-214 243-421 (434)
102 PRK03633 putative MFS family t 99.2 1E-09 2.3E-14 105.5 18.0 157 25-211 210-366 (381)
103 PRK11551 putative 3-hydroxyphe 99.2 1.1E-09 2.3E-14 106.0 17.9 166 19-211 224-390 (406)
104 TIGR01299 synapt_SV2 synaptic 99.2 6.7E-10 1.5E-14 115.2 17.2 129 59-214 603-731 (742)
105 COG0738 FucP Fucose permease [ 99.2 1.6E-09 3.4E-14 102.7 17.9 136 33-191 30-165 (422)
106 PRK12382 putative transporter; 99.2 7E-10 1.5E-14 106.9 16.2 162 25-215 226-387 (392)
107 TIGR00883 2A0106 metabolite-pr 99.2 1.7E-09 3.8E-14 102.9 18.5 130 65-212 49-186 (394)
108 TIGR00893 2A0114 d-galactonate 99.2 1.4E-09 2.9E-14 103.3 17.6 180 15-214 215-396 (399)
109 TIGR00889 2A0110 nucleoside tr 99.2 6.4E-10 1.4E-14 108.7 15.5 175 18-215 211-400 (418)
110 PRK10489 enterobactin exporter 99.2 1.1E-09 2.4E-14 106.6 17.0 159 31-215 239-397 (417)
111 TIGR00902 2A0127 phenyl propri 99.2 2.2E-09 4.8E-14 103.4 18.1 164 16-207 5-169 (382)
112 TIGR00897 2A0118 polyol permea 99.1 3.4E-09 7.4E-14 102.8 19.2 177 15-215 222-399 (402)
113 TIGR00880 2_A_01_02 Multidrug 99.1 2.9E-10 6.2E-15 91.9 9.7 130 59-214 6-135 (141)
114 COG2223 NarK Nitrate/nitrite t 99.1 3.9E-09 8.4E-14 100.5 18.6 186 8-219 7-195 (417)
115 TIGR00892 2A0113 monocarboxyla 99.1 1.5E-09 3.2E-14 107.3 16.2 176 15-214 241-418 (455)
116 TIGR00902 2A0127 phenyl propri 99.1 4.2E-09 9.2E-14 101.4 18.8 171 14-213 204-375 (382)
117 PRK09528 lacY galactoside perm 99.1 6.3E-10 1.4E-14 108.5 13.0 168 21-214 229-400 (420)
118 KOG2532 Permease of the major 99.1 6.7E-10 1.4E-14 109.6 12.8 146 45-214 67-213 (466)
119 PRK11010 ampG muropeptide tran 99.1 3.9E-09 8.5E-14 105.3 18.4 179 17-217 224-403 (491)
120 COG2814 AraJ Arabinose efflux 99.1 6.5E-09 1.4E-13 99.5 18.8 183 13-222 209-391 (394)
121 PRK09669 putative symporter Ya 99.1 2.6E-09 5.6E-14 105.1 16.5 173 22-212 16-199 (444)
122 PRK11128 putative 3-phenylprop 99.1 4.3E-09 9.3E-14 101.3 17.4 157 24-211 13-173 (382)
123 PRK15075 citrate-proton sympor 99.1 4.2E-09 9.2E-14 103.2 17.6 152 21-195 244-397 (434)
124 TIGR00879 SP MFS transporter, 99.1 3.6E-09 7.8E-14 103.2 17.0 182 16-214 285-467 (481)
125 TIGR00788 fbt folate/biopterin 99.1 4.6E-09 1E-13 104.2 17.8 176 14-214 24-206 (468)
126 KOG0254 Predicted transporter 99.1 4.3E-09 9.3E-14 105.6 17.6 151 32-208 63-221 (513)
127 TIGR00712 glpT glycerol-3-phos 99.1 2.4E-09 5.1E-14 105.1 15.1 176 16-215 252-431 (438)
128 PF05977 MFS_3: Transmembrane 99.1 5.3E-09 1.1E-13 104.9 17.4 180 17-218 12-191 (524)
129 COG2223 NarK Nitrate/nitrite t 99.1 3.5E-09 7.6E-14 100.8 15.0 185 13-217 216-401 (417)
130 PTZ00207 hypothetical protein; 99.1 8.4E-09 1.8E-13 104.3 18.0 170 11-206 24-194 (591)
131 PRK10406 alpha-ketoglutarate t 99.1 1.1E-08 2.5E-13 100.1 18.5 170 23-214 251-421 (432)
132 PF11700 ATG22: Vacuole efflux 99.1 1E-08 2.2E-13 101.8 18.1 185 13-215 279-466 (477)
133 PF06609 TRI12: Fungal trichot 99.0 5.1E-09 1.1E-13 105.5 15.1 150 36-213 64-213 (599)
134 TIGR01272 gluP glucose/galacto 99.0 9.6E-09 2.1E-13 96.5 16.1 165 14-207 139-305 (310)
135 PRK15402 multidrug efflux syst 99.0 2.9E-08 6.4E-13 96.2 20.0 166 16-203 216-381 (406)
136 TIGR00792 gph sugar (Glycoside 99.0 1.2E-08 2.6E-13 99.5 17.4 161 15-195 222-383 (437)
137 KOG4686 Predicted sugar transp 99.0 6.3E-09 1.4E-13 94.2 13.7 170 11-208 260-433 (459)
138 PRK10504 putative transporter; 99.0 1.5E-08 3.3E-13 100.1 17.8 158 15-195 261-418 (471)
139 PRK10429 melibiose:sodium symp 99.0 1.5E-08 3.3E-13 100.6 17.5 176 22-215 13-199 (473)
140 PRK10091 MFS transport protein 99.0 2.2E-08 4.7E-13 96.5 17.7 171 17-213 201-372 (382)
141 PLN00028 nitrate transmembrane 99.0 1.5E-08 3.2E-13 100.8 16.9 176 16-217 253-433 (476)
142 KOG0255 Synaptic vesicle trans 99.0 9.4E-09 2E-13 103.2 15.4 140 44-212 111-250 (521)
143 TIGR02332 HpaX 4-hydroxyphenyl 99.0 1.8E-08 3.8E-13 98.3 16.0 165 15-205 242-409 (412)
144 PRK11462 putative transporter; 99.0 4.1E-08 8.8E-13 97.3 18.7 179 19-215 13-202 (460)
145 TIGR00894 2A0114euk Na(+)-depe 99.0 3.9E-08 8.3E-13 97.2 18.4 178 14-215 260-448 (465)
146 TIGR00900 2A0121 H+ Antiporter 99.0 1.3E-08 2.9E-13 95.9 14.3 155 15-194 210-365 (365)
147 TIGR00881 2A0104 phosphoglycer 99.0 1.1E-08 2.4E-13 96.8 13.7 162 15-199 216-379 (379)
148 PRK09848 glucuronide transport 98.9 5.6E-08 1.2E-12 95.6 18.7 155 16-188 9-173 (448)
149 PRK10133 L-fucose transporter; 98.9 3.4E-08 7.3E-13 97.2 16.9 167 17-212 260-428 (438)
150 TIGR02718 sider_RhtX_FptX side 98.9 5.2E-08 1.1E-12 94.0 17.8 176 16-211 209-385 (390)
151 PRK11128 putative 3-phenylprop 98.9 6.1E-08 1.3E-12 93.3 18.1 168 15-211 205-373 (382)
152 PRK12307 putative sialic acid 98.9 6.5E-08 1.4E-12 94.1 18.3 144 30-198 246-389 (426)
153 PRK14995 methyl viologen resis 98.9 1.9E-08 4.2E-13 100.4 14.9 154 15-191 259-412 (495)
154 TIGR00711 efflux_EmrB drug res 98.9 1.9E-08 4.1E-13 99.5 14.4 156 15-192 255-410 (485)
155 PRK11902 ampG muropeptide tran 98.9 9.2E-08 2E-12 92.7 18.7 171 18-214 212-387 (402)
156 TIGR00710 efflux_Bcr_CflA drug 98.9 1.1E-07 2.3E-12 90.8 18.9 162 17-201 208-370 (385)
157 TIGR00882 2A0105 oligosacchari 98.9 4.5E-08 9.7E-13 94.6 15.5 171 16-212 216-390 (396)
158 PRK09848 glucuronide transport 98.9 6.2E-08 1.3E-12 95.3 16.7 162 15-194 228-390 (448)
159 TIGR00895 2A0115 benzoate tran 98.9 3.8E-08 8.3E-13 93.9 14.5 148 15-189 250-397 (398)
160 TIGR00889 2A0110 nucleoside tr 98.9 1.5E-07 3.2E-12 92.1 18.5 165 20-210 7-173 (418)
161 TIGR00896 CynX cyanate transpo 98.9 8E-08 1.7E-12 91.3 16.2 154 15-194 197-350 (355)
162 PRK15034 nitrate/nitrite trans 98.9 1.2E-07 2.6E-12 93.4 17.7 186 14-215 251-452 (462)
163 PRK10077 xylE D-xylose transpo 98.9 2E-07 4.3E-12 92.1 19.4 154 37-213 293-453 (479)
164 TIGR00887 2A0109 phosphate:H+ 98.9 5.5E-08 1.2E-12 97.3 15.3 167 22-211 295-483 (502)
165 TIGR00926 2A1704 Peptide:H+ sy 98.8 6E-08 1.3E-12 99.6 15.4 246 46-342 15-270 (654)
166 PRK10213 nepI ribonucleoside t 98.8 2.5E-07 5.4E-12 89.7 19.0 166 15-207 216-381 (394)
167 PF13347 MFS_2: MFS/sugar tran 98.8 6.6E-08 1.4E-12 94.6 15.1 159 15-192 225-384 (428)
168 PRK10054 putative transporter; 98.8 8.5E-08 1.8E-12 93.0 15.2 174 15-214 206-381 (395)
169 PF13347 MFS_2: MFS/sugar tran 98.8 2.5E-08 5.5E-13 97.6 11.0 178 24-219 10-200 (428)
170 PRK08633 2-acyl-glycerophospho 98.8 1.4E-07 3.1E-12 103.1 18.0 163 16-204 233-397 (1146)
171 PRK10429 melibiose:sodium symp 98.8 4.5E-07 9.7E-12 90.1 19.0 165 15-195 231-396 (473)
172 TIGR02718 sider_RhtX_FptX side 98.8 5.4E-07 1.2E-11 86.9 18.9 177 17-216 3-183 (390)
173 PRK11646 multidrug resistance 98.7 3.6E-07 7.8E-12 88.8 16.2 154 33-212 226-383 (400)
174 PF05977 MFS_3: Transmembrane 98.7 4E-07 8.6E-12 91.4 16.6 174 16-215 219-392 (524)
175 PRK09669 putative symporter Ya 98.7 6.5E-07 1.4E-11 88.1 17.5 161 15-195 229-391 (444)
176 PRK06814 acylglycerophosphoeth 98.7 2.5E-07 5.4E-12 101.4 16.0 183 15-205 225-410 (1140)
177 KOG2504 Monocarboxylate transp 98.7 9.5E-08 2.1E-12 95.5 11.5 175 17-218 44-222 (509)
178 TIGR00901 2A0125 AmpG-related 98.7 2.5E-07 5.5E-12 87.8 13.7 145 16-176 210-355 (356)
179 PF05631 DUF791: Protein of un 98.7 4.5E-07 9.8E-12 85.3 14.9 153 44-218 62-217 (354)
180 KOG2532 Permease of the major 98.7 3.4E-07 7.3E-12 90.6 14.7 180 15-216 258-446 (466)
181 TIGR00898 2A0119 cation transp 98.7 4.5E-07 9.7E-12 90.4 15.5 128 60-213 364-491 (505)
182 PF07690 MFS_1: Major Facilita 98.7 2.2E-07 4.8E-12 87.2 12.2 143 18-183 209-352 (352)
183 KOG2533 Permease of the major 98.7 2E-07 4.4E-12 92.6 11.8 144 43-212 73-222 (495)
184 PRK11043 putative transporter; 98.6 3.1E-06 6.7E-11 81.8 19.7 152 25-199 213-364 (401)
185 PRK11102 bicyclomycin/multidru 98.6 2.6E-06 5.6E-11 81.4 18.8 122 17-154 196-317 (377)
186 COG2270 Permeases of the major 98.6 4.8E-07 1E-11 86.5 13.3 176 15-216 252-428 (438)
187 KOG0569 Permease of the major 98.6 6.1E-07 1.3E-11 88.5 14.4 139 54-215 63-203 (485)
188 TIGR00903 2A0129 major facilit 98.6 2.1E-06 4.5E-11 82.6 16.6 165 15-212 192-360 (368)
189 KOG2615 Permease of the major 98.6 3.5E-07 7.5E-12 86.2 10.3 118 47-191 64-181 (451)
190 PRK11195 lysophospholipid tran 98.6 4E-06 8.7E-11 81.2 18.2 157 28-211 218-374 (393)
191 COG2211 MelB Na+/melibiose sym 98.6 4.5E-06 9.7E-11 81.8 18.4 212 16-245 13-237 (467)
192 TIGR00885 fucP L-fucose:H+ sym 98.6 2E-06 4.2E-11 84.0 16.0 166 16-210 233-405 (410)
193 COG2807 CynX Cyanate permease 98.6 3.9E-06 8.5E-11 78.9 16.4 173 15-216 12-185 (395)
194 PRK10473 multidrug efflux syst 98.5 6.8E-06 1.5E-10 79.1 18.9 71 31-102 219-289 (392)
195 COG2807 CynX Cyanate permease 98.5 6.4E-06 1.4E-10 77.4 17.4 161 15-201 208-369 (395)
196 KOG2504 Monocarboxylate transp 98.5 9.3E-07 2E-11 88.4 12.3 178 15-217 298-476 (509)
197 KOG0252 Inorganic phosphate tr 98.5 6E-07 1.3E-11 86.5 10.0 142 48-204 81-233 (538)
198 PF00083 Sugar_tr: Sugar (and 98.4 5E-09 1.1E-13 102.8 -6.7 134 52-208 47-183 (451)
199 TIGR00886 2A0108 nitrite extru 98.4 2.8E-06 6E-11 80.6 11.9 140 16-178 226-365 (366)
200 KOG0569 Permease of the major 98.4 1.4E-05 3E-10 79.0 17.0 185 11-213 265-450 (485)
201 PRK11462 putative transporter; 98.4 1.8E-05 3.8E-10 78.5 17.3 158 15-191 228-386 (460)
202 TIGR00924 yjdL_sub1_fam amino 98.3 1.3E-05 2.9E-10 79.7 15.3 187 17-219 274-470 (475)
203 PRK11652 emrD multidrug resist 98.3 5.3E-05 1.2E-09 73.0 18.7 141 35-199 227-367 (394)
204 COG2211 MelB Na+/melibiose sym 98.3 3.2E-05 6.8E-10 75.9 16.4 157 15-189 236-393 (467)
205 PF01306 LacY_symp: LacY proto 98.3 1.1E-05 2.5E-10 78.0 12.7 177 15-214 7-185 (412)
206 PF03825 Nuc_H_symport: Nucleo 98.2 7.2E-05 1.6E-09 72.8 17.5 112 23-154 10-121 (400)
207 PF03092 BT1: BT1 family; Int 98.1 4.5E-05 9.7E-10 75.1 14.0 156 37-212 11-170 (433)
208 KOG2816 Predicted transporter 98.1 6.9E-05 1.5E-09 74.1 15.2 177 15-220 18-202 (463)
209 PRK15403 multidrug efflux syst 98.1 0.00022 4.7E-09 69.6 18.1 168 15-205 218-385 (413)
210 KOG2325 Predicted transporter/ 98.0 8.1E-05 1.8E-09 73.3 13.0 184 10-215 29-227 (488)
211 KOG3626 Organic anion transpor 98.0 0.0001 2.2E-09 75.7 13.7 201 12-219 93-345 (735)
212 PF06813 Nodulin-like: Nodulin 98.0 0.00044 9.5E-09 62.8 16.1 106 37-156 23-128 (250)
213 PF03825 Nuc_H_symport: Nucleo 98.0 0.00061 1.3E-08 66.4 17.8 179 17-216 209-394 (400)
214 PF03209 PUCC: PUCC protein; 98.0 0.00054 1.2E-08 65.8 16.9 164 28-213 221-394 (403)
215 KOG2533 Permease of the major 97.9 6.9E-05 1.5E-09 74.6 10.9 86 15-100 273-362 (495)
216 KOG2563 Permease of the major 97.9 0.00033 7.2E-09 67.8 14.9 134 38-190 67-200 (480)
217 PRK10207 dipeptide/tripeptide 97.9 0.00015 3.3E-09 72.5 13.1 178 24-218 278-477 (489)
218 KOG0253 Synaptic vesicle trans 97.9 0.00034 7.4E-09 66.2 14.3 171 14-212 325-514 (528)
219 PF03137 OATP: Organic Anion T 97.9 1.9E-06 4.1E-11 86.9 -0.8 191 19-217 7-250 (539)
220 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00013 2.9E-09 53.7 9.2 66 24-91 9-74 (77)
221 COG0477 ProP Permeases of the 97.8 0.00079 1.7E-08 60.3 15.5 147 36-206 23-174 (338)
222 PF01306 LacY_symp: LacY proto 97.8 0.00066 1.4E-08 65.9 14.2 174 13-212 218-395 (412)
223 KOG0253 Synaptic vesicle trans 97.8 0.0037 8E-08 59.4 18.3 184 36-250 98-283 (528)
224 PRK09584 tppB putative tripept 97.7 0.00085 1.8E-08 67.3 15.2 173 25-215 282-477 (500)
225 COG0738 FucP Fucose permease [ 97.6 0.0021 4.6E-08 61.6 14.3 146 33-207 254-400 (422)
226 TIGR00788 fbt folate/biopterin 97.6 0.00035 7.6E-09 69.4 9.3 135 43-194 280-415 (468)
227 PF03209 PUCC: PUCC protein; 97.4 0.0068 1.5E-07 58.4 15.2 138 44-194 8-153 (403)
228 KOG3764 Vesicular amine transp 97.4 0.00028 6.1E-09 67.3 5.7 167 34-218 289-455 (464)
229 KOG4686 Predicted sugar transp 97.4 8.8E-06 1.9E-10 74.2 -4.3 157 14-193 43-199 (459)
230 PF11700 ATG22: Vacuole efflux 97.4 0.014 3.1E-07 58.1 17.9 170 55-244 74-277 (477)
231 PF00083 Sugar_tr: Sugar (and 97.4 1.8E-06 3.8E-11 84.8 -9.8 181 14-213 251-432 (451)
232 PTZ00207 hypothetical protein; 97.3 0.001 2.2E-08 67.8 9.4 177 15-220 353-555 (591)
233 TIGR01301 GPH_sucrose GPH fami 97.3 0.01 2.2E-07 59.1 15.5 202 12-218 255-472 (477)
234 KOG0637 Sucrose transporter an 97.0 0.0016 3.4E-08 63.3 6.2 166 15-189 32-202 (498)
235 TIGR00805 oat sodium-independe 96.8 0.0046 1E-07 63.9 8.9 83 15-98 330-415 (633)
236 KOG0254 Predicted transporter 96.7 0.052 1.1E-06 54.6 15.4 88 13-103 292-380 (513)
237 KOG0252 Inorganic phosphate tr 96.6 0.0043 9.4E-08 60.4 6.4 178 15-215 304-496 (538)
238 TIGR01272 gluP glucose/galacto 96.6 0.0075 1.6E-07 56.6 7.7 85 122-212 8-108 (310)
239 KOG4332 Predicted sugar transp 96.5 0.0025 5.3E-08 58.1 3.9 156 38-215 59-218 (454)
240 COG2270 Permeases of the major 96.4 0.058 1.2E-06 52.3 12.7 129 34-185 34-170 (438)
241 PF06609 TRI12: Fungal trichot 96.4 0.06 1.3E-06 54.9 13.5 150 13-186 308-461 (599)
242 PRK03612 spermidine synthase; 96.4 0.22 4.8E-06 50.2 17.5 134 36-190 35-169 (521)
243 PF05978 UNC-93: Ion channel r 96.4 0.071 1.5E-06 44.8 11.7 98 61-185 47-144 (156)
244 KOG2563 Permease of the major 96.2 0.062 1.3E-06 52.4 11.8 181 17-222 268-455 (480)
245 KOG2816 Predicted transporter 96.1 0.061 1.3E-06 53.4 11.5 154 10-189 235-389 (463)
246 PF06779 DUF1228: Protein of u 96.0 0.062 1.4E-06 40.2 8.3 72 26-102 6-77 (85)
247 PRK15462 dipeptide/tripeptide 95.9 0.24 5.1E-06 49.7 14.8 138 35-189 288-437 (493)
248 TIGR00769 AAA ADP/ATP carrier 95.7 1.3 2.9E-05 44.1 18.8 163 12-190 4-189 (472)
249 KOG3762 Predicted transporter 95.7 0.058 1.3E-06 53.7 9.1 130 64-218 419-548 (618)
250 KOG2615 Permease of the major 95.3 0.33 7.2E-06 46.6 12.1 153 14-191 259-413 (451)
251 KOG0255 Synaptic vesicle trans 95.2 1 2.2E-05 45.1 16.7 146 15-191 322-467 (521)
252 KOG3762 Predicted transporter 94.8 0.053 1.1E-06 54.0 5.7 66 33-100 29-95 (618)
253 PF01770 Folate_carrier: Reduc 94.7 1.2 2.6E-05 43.4 14.6 153 36-214 24-179 (412)
254 PF06963 FPN1: Ferroportin1 (F 93.2 3.5 7.6E-05 40.6 15.0 136 33-185 276-411 (432)
255 KOG3098 Uncharacterized conser 92.2 2.4 5.1E-05 42.1 12.2 75 61-156 60-134 (461)
256 KOG3626 Organic anion transpor 91.6 0.56 1.2E-05 48.8 7.4 76 16-91 393-470 (735)
257 KOG3098 Uncharacterized conser 91.6 8.8 0.00019 38.1 15.4 92 63-156 291-385 (461)
258 PF06963 FPN1: Ferroportin1 (F 89.5 23 0.0005 34.9 17.1 184 17-212 4-195 (432)
259 KOG3574 Acetyl-CoA transporter 88.6 13 0.00028 36.2 13.1 157 12-186 28-189 (510)
260 KOG1330 Sugar transporter/spin 88.5 2.7 5.9E-05 41.4 8.9 33 46-78 278-310 (493)
261 PF03137 OATP: Organic Anion T 88.2 0.15 3.2E-06 51.8 0.0 84 15-98 305-390 (539)
262 KOG3097 Predicted membrane pro 88.0 6 0.00013 37.5 10.3 115 10-152 24-138 (390)
263 KOG4332 Predicted sugar transp 85.2 8.4 0.00018 35.7 9.5 139 53-212 284-426 (454)
264 COG3104 PTR2 Dipeptide/tripept 83.8 19 0.0004 36.0 12.0 109 63-187 336-451 (498)
265 KOG1237 H+/oligopeptide sympor 81.9 4.9 0.00011 41.1 7.5 130 83-244 32-162 (571)
266 PF02487 CLN3: CLN3 protein; 80.0 29 0.00064 33.8 11.8 155 21-206 6-184 (402)
267 KOG2325 Predicted transporter/ 79.0 4.1 8.8E-05 40.7 5.6 191 13-210 260-468 (488)
268 TIGR00769 AAA ADP/ATP carrier 72.5 1.1E+02 0.0024 30.6 18.1 65 139-208 281-345 (472)
269 TIGR00880 2_A_01_02 Multidrug 69.6 48 0.001 25.3 9.5 40 55-95 91-130 (141)
270 PF02487 CLN3: CLN3 protein; 68.5 41 0.00089 32.8 9.6 143 20-191 252-396 (402)
271 PRK10263 DNA translocase FtsK; 63.4 45 0.00097 37.4 9.5 36 176-211 141-176 (1355)
272 PF03219 TLC: TLC ATP/ADP tran 62.8 1.7E+02 0.0038 29.3 18.2 158 48-211 173-365 (491)
273 COG5336 Uncharacterized protei 61.0 40 0.00087 26.3 6.3 35 61-95 52-86 (116)
274 PF14007 YtpI: YtpI-like prote 57.7 32 0.00069 26.0 5.2 69 151-225 18-86 (89)
275 PF06645 SPC12: Microsomal sig 55.0 35 0.00075 24.9 4.9 49 171-222 13-61 (76)
276 KOG4112 Signal peptidase subun 49.6 53 0.0012 24.9 5.2 50 170-222 27-76 (101)
277 PF09527 ATPase_gene1: Putativ 46.0 88 0.0019 20.8 6.5 30 61-90 10-39 (55)
278 PRK02237 hypothetical protein; 45.0 60 0.0013 25.4 5.0 49 51-100 56-104 (109)
279 TIGR00939 2a57 Equilibrative N 44.4 3.2E+02 0.007 26.9 13.9 51 123-184 105-155 (437)
280 PF03092 BT1: BT1 family; Int 42.9 92 0.002 30.6 7.5 43 145-193 339-381 (433)
281 COG3619 Predicted membrane pro 41.8 2.6E+02 0.0056 25.0 15.3 31 14-44 11-41 (226)
282 PF02694 UPF0060: Uncharacteri 36.2 2.1E+02 0.0045 22.3 7.7 50 50-100 53-102 (107)
283 PF07672 MFS_Mycoplasma: Mycop 28.1 4.8E+02 0.01 24.0 9.1 37 123-160 203-239 (267)
284 PF00854 PTR2: POT family; In 27.8 2.2E+02 0.0047 27.0 7.2 76 26-102 42-122 (372)
285 PF02659 DUF204: Domain of unk 24.5 2.4E+02 0.0053 19.4 5.3 21 69-90 42-62 (67)
286 KOG1479 Nucleoside transporter 24.4 5.1E+02 0.011 25.4 8.9 156 14-185 245-402 (406)
287 TIGR00806 rfc RFC reduced fola 24.3 6.8E+02 0.015 25.4 9.9 84 55-156 302-385 (511)
288 TIGR02230 ATPase_gene1 F0F1-AT 24.1 3.3E+02 0.0072 21.0 6.1 23 61-83 52-74 (100)
289 TIGR01667 YCCS_YHJK integral m 24.1 5.6E+02 0.012 27.1 9.8 34 69-102 41-77 (701)
290 TIGR00939 2a57 Equilibrative N 24.0 7E+02 0.015 24.5 12.1 55 124-184 372-426 (437)
291 PF06912 DUF1275: Protein of u 24.0 4.7E+02 0.01 22.5 16.3 37 172-209 168-204 (209)
292 TIGR02123 TRAP_fused TRAP tran 23.4 2.1E+02 0.0047 29.6 6.5 57 21-77 441-499 (613)
293 PF03988 DUF347: Repeat of Unk 23.3 2.3E+02 0.005 19.0 4.6 23 174-196 6-28 (55)
294 PF06813 Nodulin-like: Nodulin 22.2 2.9E+02 0.0062 25.0 6.4 71 137-216 16-86 (250)
295 KOG0637 Sucrose transporter an 21.9 3.5E+02 0.0076 27.1 7.2 69 12-81 276-361 (498)
296 PF03219 TLC: TLC ATP/ADP tran 21.8 8.2E+02 0.018 24.6 17.1 40 146-191 166-205 (491)
297 TIGR01666 YCCS hypothetical me 21.4 6.7E+02 0.015 26.6 9.7 53 69-139 41-96 (704)
298 PF11151 DUF2929: Protein of u 21.4 2.8E+02 0.006 18.9 6.1 36 170-205 6-41 (57)
299 PF11119 DUF2633: Protein of u 21.1 1.8E+02 0.004 20.0 3.7 24 14-37 10-33 (59)
300 PF09061 Stirrup: Stirrup; In 20.3 41 0.00089 23.6 0.4 17 297-313 62-78 (79)
301 PF10777 YlaC: Inner membrane 20.0 3.9E+02 0.0084 22.3 6.0 38 188-225 54-91 (155)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-58 Score=455.88 Aligned_cols=330 Identities=38% Similarity=0.612 Sum_probs=302.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
++|+|+++.++++.|.+||+++||+..|++.|++.++|.+..+|+..++.|.+..++.|++||++||.|+|||++|.+++
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCC----CCCCCCC--chhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhh
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDC----GKSSCLK--GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKA 163 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~----~~~~~~~--~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~ 163 (346)
+++.+|..++++++.+|.+.|+.| ..+.|+. ..+...++.+++++++|.|+.+||+.++++|||++.+++++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999999999999999887 1134655 5678899999999999999999999999999999988888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHh
Q 019064 164 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243 (346)
Q Consensus 164 ~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~ 243 (346)
+.++|||+|+..|+|.+++.++..|+|++.||.++|.++++++++++++|+.+.+.|++++|.|+|++++++|++++.|+
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCC----CCCCCcccCCchhHHHHHHHHhHhHHHhhh
Q 019064 244 RKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDS----TAAAPWRVCTVTQVEEVKILARMMPILAST 319 (346)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~----~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~ 319 (346)
++.+.+.+++++ + +...+....+++++++++|||+.+..++ ...+||++|+++||||+|.++|++|+|++.
T Consensus 272 ~~~~~~~~~~~~-~----~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 272 RKAVVSLDPEEL-Y----YDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HhccCCCcchhc-c----ccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 988887664443 1 1112233456688999999999876542 245799999999999999999999999999
Q ss_pred HHHHHHHhcccchhhhccccccCCC
Q 019064 320 IIMNTCLAQLQTLSDTPQESHSFSA 344 (346)
Q Consensus 320 i~~~~~~~q~~t~~~~Q~~~m~~~~ 344 (346)
++||++++|++|++++||..||.+.
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~ 371 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHL 371 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCC
Confidence 9999999999999999999999764
No 2
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=2.2e-40 Score=336.10 Aligned_cols=267 Identities=21% Similarity=0.313 Sum_probs=232.9
Q ss_pred HHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCC
Q 019064 29 MGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSL 108 (346)
Q Consensus 29 ~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~ 108 (346)
++|||+..++++|+++.+|++.++++.+.+.|...++++|++||++||+++||++++.++.+++.+|++++++.+. |..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999988653 321
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 019064 109 HPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY 188 (346)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~ 188 (346)
.. ......+++++.++++|.|++|||+.++++||++++++ +++.++|+|+|+++|+|+++++++.++
T Consensus 80 ~~----------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 80 GH----------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred cc----------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 12345678999999999999999999999999986543 347999999999999999999999999
Q ss_pred hhhcc-------chhHHHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHhccCCCCCCCchhhhhhhh
Q 019064 189 VFIDQ-------GWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKI 261 (346)
Q Consensus 189 i~~~~-------g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~~~~~~~~~~~~ 261 (346)
+++++ +|..+|+++++++++++++++.++++|++++|.++++.++.++++.++|+++.....
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~----------- 215 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE----------- 215 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-----------
Confidence 98553 699999999999999999999999999998999999999999999998875432110
Q ss_pred cccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHhhhHHHHHHHhcccchhhhcccccc
Q 019064 262 ERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHS 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~i~~~~~~~q~~t~~~~Q~~~m~ 341 (346)
+ ...+|+|+|++++ .+++|||+|++++++|+|++.++||++++|+.|+++.|+++|+
T Consensus 216 ----------~-~~~~~ld~a~~~~------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~ 272 (654)
T TIGR00926 216 ----------H-WPLHWLDYAKDKH------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD 272 (654)
T ss_pred ----------c-cchhHHHHhcccc------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence 0 1147888887543 3579999999999999999999999999999999999999997
Q ss_pred CC
Q 019064 342 FS 343 (346)
Q Consensus 342 ~~ 343 (346)
.+
T Consensus 273 ~~ 274 (654)
T TIGR00926 273 GD 274 (654)
T ss_pred Cc
Confidence 54
No 3
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-39 Score=308.18 Aligned_cols=287 Identities=18% Similarity=0.301 Sum_probs=224.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccC----CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMH----FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC 85 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg----~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i 85 (346)
.-++||.++.++.+|++|||+|||++..+..|++.+++ ++.++|..+.+.|....|++|++|||+|||++|+|||+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 33789999999999999999999999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (346)
Q Consensus 86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~ 165 (346)
..+.+++.+|+++++..+ . .....+++++.++++|.|++|||++++++|+++++||+ |+
T Consensus 96 ~lGail~~iGh~~L~~~~----~-------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----rD 154 (498)
T COG3104 96 VLGAILMAIGHLVLAISS----V-------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----RD 154 (498)
T ss_pred HHHHHHHHHHHHHHhccc----c-------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----cC
Confidence 999999999999998753 0 13567999999999999999999999999999999986 78
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecC--CCCCcchh------HHHHH
Q 019064 166 SYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQ--PGESPLVR------VAQVI 237 (346)
Q Consensus 166 ~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~--p~gs~l~~------i~~v~ 237 (346)
..|+.+|.++|+|+++++.+.+++++++||..+|.++++.|.+++++++++++++...+ |..+|++. ...++
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLV 234 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876543 23333211 11111
Q ss_pred HHHHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHh
Q 019064 238 VVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILA 317 (346)
Q Consensus 238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~ 317 (346)
+..+.--. ..+...++-+.....--+.... -.+-++ -+ .++.+ ||.|++++++|+|+
T Consensus 235 ~~~~~~~~-------~~~l~~~~~~~~~~~~~i~~~~--~~~~~~----------~~---~~~~~-~er~r~~~~~~Lfl 291 (498)
T COG3104 235 VMILAALL-------TLLLNQNTFSGVLLVISILIAI--IYFAEA----------FR---SPKVF-DERRRLLAAIPLFL 291 (498)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH--HHHHHH----------hc---cCccH-HHHHHHHHHHHHHH
Confidence 11111000 0000000000000000000000 000000 01 12345 89999999999999
Q ss_pred hhHHHHHHHhcccchhhhccccc
Q 019064 318 STIIMNTCLAQLQTLSDTPQESH 340 (346)
Q Consensus 318 ~~i~~~~~~~q~~t~~~~Q~~~m 340 (346)
+.++||++|+|+.|++..|+.+|
T Consensus 292 ~~~iFW~~~~Q~~ssl~~~a~~~ 314 (498)
T COG3104 292 FAVIFWALYEQMGSSLNLYADRN 314 (498)
T ss_pred HHHHHHHHHHhccchHHHHHHHh
Confidence 99999999999999999999987
No 4
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=1.7e-29 Score=251.02 Aligned_cols=194 Identities=14% Similarity=0.253 Sum_probs=172.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064 8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV 87 (346)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~ 87 (346)
...+++||.++.+++.|++||++||++..++++|+++++|++..+++++.+.+....++.++++|+++||++||||++++
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 34457999999999999999999999999999999999999999999999999999999999999999997799999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
+.+++.+|.+++.++.. ....+++++.++++|.|+++|+..++++|+|++++++ +++.
T Consensus 87 g~~~~~~g~~~~~~~~~------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~ 144 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLL------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGA 144 (489)
T ss_pred HHHHHHHHHHHHHHhcc------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcc
Confidence 99999999988876531 1234667899999999999999999999999876632 5678
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec
Q 019064 168 FNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ 223 (346)
Q Consensus 168 f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~ 223 (346)
++++|+++|+|+++++.+++++.+++||+++|.++++.+.++++.+..+++.+++.
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~ 200 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDI 200 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhccc
Confidence 99999999999999999999999999999999998888888888888877666553
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=5e-29 Score=246.97 Aligned_cols=198 Identities=16% Similarity=0.247 Sum_probs=175.0
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccc--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q 019064 9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNE--MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL 86 (346)
Q Consensus 9 ~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~--lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~ 86 (346)
+..++||..+.+++.|++||++||++.+++++|++++ +|++..+++.+.+.+....+++++++|+++||++|||+++.
T Consensus 4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 4457899999999999999999999999999999987 99999999999999999999999999999999669999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
++.+++.+|.+++.++. +.+.+++++.+.++|.|+.+|+..++++|++++++++ +|++
T Consensus 84 ~~~~~~~~g~~~~~~~~-------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~ 141 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSI-------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDG 141 (475)
T ss_pred HHHHHHHHHHHHHHhcc-------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccc
Confidence 99999999988777642 2456778888999999999999999999999876532 2677
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCCCCC
Q 019064 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGES 228 (346)
Q Consensus 167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs 228 (346)
.++++|++.|+|+++|+.+++++.+++||+++|.++++.++++.++++..++.+++.+++++
T Consensus 142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 203 (475)
T TIGR00924 142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPD 203 (475)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCC
Confidence 89999999999999999999999999999999999988888888888888777765554443
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.96 E-value=1.5e-27 Score=235.33 Aligned_cols=191 Identities=20% Similarity=0.374 Sum_probs=169.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
..+|||.++.+++.|++||++||++...++.|+++.+|++..+++.+...+....+++++++|+++||++||||+++++.
T Consensus 4 ~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~ 83 (493)
T PRK15462 4 HASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGA 83 (493)
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
++..+|.+++..... ....+++++.++++|.|..+++..++.+|+|++++++ |.+.++
T Consensus 84 il~~lg~lll~~~~~------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~ 141 (493)
T PRK15462 84 LLMAIGHVVLGASEI------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFS 141 (493)
T ss_pred HHHHHHHHHHHHhhc------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceeh
Confidence 999999876653210 1233566777888999999999999999999977643 678899
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI 222 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~ 222 (346)
++|..+|+|+.+++.+.+++.+++||+.+|.++++.+++++++++.+++.+.+
T Consensus 142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~ 194 (493)
T PRK15462 142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH 194 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999998899999988888776644
No 7
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.96 E-value=2.2e-29 Score=242.08 Aligned_cols=239 Identities=30% Similarity=0.482 Sum_probs=170.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhh
Q 019064 82 FATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGA 161 (346)
Q Consensus 82 ~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~ 161 (346)
|||++++++++.+|++++++++. |...+ ++.+.+.++++++++++|+|++|||+.++++|||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~-~~~~~---------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~--- 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAI-PPSLP---------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD--- 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHT-SSSC---------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---
T ss_pred CHhhhHHHHHHHHHHHHhHHHHh-cchhh---------hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---
Confidence 69999999999999999999875 43321 245678899999999999999999999999999998742
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec-CCCCCcchh-HHHHHHH
Q 019064 162 KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ-QPGESPLVR-VAQVIVV 239 (346)
Q Consensus 162 ~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~-~p~gs~l~~-i~~v~~~ 239 (346)
.+++++|+|||+++|+|++++.++.+|+++++||.++|+++++.+++++++|+.++++|+++ +|.++++.+ ...++..
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 147 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA 147 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999988 788999888 6667777
Q ss_pred HHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcc-cCCchhHHHHHHHHhHhHHHhh
Q 019064 240 AIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWR-VCTVTQVEEVKILARMMPILAS 318 (346)
Q Consensus 240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~-~~~~~~Ve~vK~~~r~lpi~~~ 318 (346)
+.|++....|.+...+++...... .... .+.....+.+...... ...|. .|++++||++|.+.+.+|+|.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 219 (372)
T PF00854_consen 148 AFKKRKLAVPKGSSWLDWALFQYS---ERSI--FGIIVFIRAAVIFFPE---IFFWALFCQVQRVEELKALIRFLPIFLF 219 (372)
T ss_dssp HHHHHCCCH-HHHHHHHHHHHHHC---CCCC--CCCCCHHHHHHHHCCC---HHHHTTTSSTTTHHHCCHHHCHHHCCCH
T ss_pred HHHHhhcccccchHHHHHhhhhhh---hhhh--hhhhhhccchhhhhhh---hhhcccCCccceeeeeeeeeeccccCeE
Confidence 777766555422222222111100 0000 0110111111111110 01222 1678999999999999999999
Q ss_pred hHHHHHHHhcccchhhhcccccc
Q 019064 319 TIIMNTCLAQLQTLSDTPQESHS 341 (346)
Q Consensus 319 ~i~~~~~~~q~~t~~~~Q~~~m~ 341 (346)
.++|+.++.|..++++.|+.+||
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~ 242 (372)
T PF00854_consen 220 WIFYWQMYSQLNTFFLLQVPQMD 242 (372)
T ss_dssp HHHHHHHCTCCHHHHHHCGGGTT
T ss_pred EEEeeehhhhhhhHHHHhccccc
Confidence 99999999999999999999995
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.95 E-value=3.6e-26 Score=227.95 Aligned_cols=280 Identities=15% Similarity=0.233 Sum_probs=204.1
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
-+++|.++.+++.+++||++||++..+++.|+++++|++..+++.+...+....+..++++|+++||++|||+++.++.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 36788999999999999999999999999999999999999999999888888888889999999996699999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..+|..++.++. .....+++++.++++|.|..+++..++++|+|++++++ +++.+++
T Consensus 97 ~~~ig~~l~~~~~------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~ 154 (500)
T PRK09584 97 VLAIGYALVAWSG------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTM 154 (500)
T ss_pred HHHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchH
Confidence 9999987777642 12345678888999999999999999999999865532 4567889
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec--CCCCCcchh------HHHHHHHHHH
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ--QPGESPLVR------VAQVIVVAIK 242 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~--~p~gs~l~~------i~~v~~~a~~ 242 (346)
+|++.|+|+++++.+.+++.+++||+++|.+.++.++++++.++..++.++++ +|+++|+.. ...+......
T Consensus 155 ~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (500)
T PRK09584 155 YYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAI 234 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888888887777666555433 233333221 1111111111
Q ss_pred hc-cCCCCCCCch-hhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHhhhH
Q 019064 243 NR-KLSLPDNPEE-LYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTI 320 (346)
Q Consensus 243 ~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~i 320 (346)
.. ..+.++.... ++-. + .....+..+.. +..+++ |.|+.+..+++++..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~i 286 (500)
T PRK09584 235 ATWLLHNQEIARMALGVV---A------------LGIVVIFGKEA------------FAMKGA-ARRKMIVAFILMLEAI 286 (500)
T ss_pred HHHHHhcchHHHHHHHHH---H------------HHHHHHHHHHH------------hhcCHH-HHHHHHHHHHHHHHHH
Confidence 10 0000000000 0000 0 00000000000 112344 4555567788999999
Q ss_pred HHHHHHhcccchhhhccccc
Q 019064 321 IMNTCLAQLQTLSDTPQESH 340 (346)
Q Consensus 321 ~~~~~~~q~~t~~~~Q~~~m 340 (346)
+||+++.|+.+.+..|+..+
T Consensus 287 ~f~~~~~q~~~~l~~~~~~~ 306 (500)
T PRK09584 287 IFFVLYSQMPTSLNFFAIRN 306 (500)
T ss_pred HHHHHHHHhccHHHHHHHHh
Confidence 99999999999999988653
No 9
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.69 E-value=5.3e-17 Score=154.86 Aligned_cols=206 Identities=13% Similarity=0.066 Sum_probs=167.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
..++.+..++++.+.|+..-|.+...+. =.++.+|.++...+.+.++|.....+..|+.|+++||| -|++++.++..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~-~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLK-EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhH-HHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 3456788888999999999998876433 45667899999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
+.+.++..+.+. ..+.+.+.+.+.|+|.+...|..+++++|.|+++. |++.+.|+
T Consensus 108 W~~Av~~~~fs~-------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~if 162 (493)
T KOG1330|consen 108 WTLAVFASGFSN-------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGIF 162 (493)
T ss_pred HHHHHHHHHHHH-------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHHh
Confidence 999887766653 57899999999999999999999999999999764 79999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHH-HHHhcCccceecCC--C-----CCcchhHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLI-ALAIGKPFYRIQQP--G-----ESPLVRVAQVIVVAIK 242 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~-i~~~~~~~~~~~~p--~-----gs~l~~i~~v~~~a~~ 242 (346)
||++++|+.+|..+++++.+..+ ||++|.+.+++.++..+ ++++.+...+...+ + ..|.+...|=++...|
T Consensus 163 y~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~ 242 (493)
T KOG1330|consen 163 YFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAK 242 (493)
T ss_pred hhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHc
Confidence 99999999999999999988766 99999988776655444 44444333221211 1 2356667776666666
Q ss_pred hc
Q 019064 243 NR 244 (346)
Q Consensus 243 ~~ 244 (346)
++
T Consensus 243 ~~ 244 (493)
T KOG1330|consen 243 IK 244 (493)
T ss_pred cC
Confidence 54
No 10
>PRK10054 putative transporter; Provisional
Probab=99.66 E-value=4.6e-15 Score=143.75 Aligned_cols=176 Identities=13% Similarity=0.100 Sum_probs=147.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+.+.+|+.+.+++..++-.++++.+.+.++.|+++++|++..+.+.+.+.+.....+..++.|+++||+ |||+++.++.
T Consensus 2 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~ 80 (395)
T PRK10054 2 NLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAI 80 (395)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHH
Confidence 345678899999999999999999999999999999999999999999999889999999999999995 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
++..++.+++.+.. +.+.+++.+.+.+.+.+...++..+..+|.+++++ +.+.++
T Consensus 81 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g 135 (395)
T PRK10054 81 TAFASGFIAIPLVN-------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFS 135 (395)
T ss_pred HHHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHH
Confidence 88888877665542 34555566667777777778888888889887432 678889
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
+.+...|+|.++++.+++++.+ .+|+..|.+.+++.+++++.
T Consensus 136 ~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 136 LNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHH
Confidence 9999999999999999998875 79999999887766665443
No 11
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.62 E-value=1.6e-14 Score=135.92 Aligned_cols=166 Identities=22% Similarity=0.305 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~ 100 (346)
++..++..++.......++.++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4566777777777777777688899999999999999999999999999999999995 999999999999999854444
Q ss_pred hhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 019064 101 IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180 (346)
Q Consensus 101 l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~ 180 (346)
++. +.+.+++++++.|++.+...+...++..|.+++++ |...+++.....++|.+
T Consensus 81 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~ 135 (352)
T PF07690_consen 81 FAS-------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI 135 (352)
T ss_dssp HHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred hhh-------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence 321 34578899999999999999999999999999754 67888899999999999
Q ss_pred HHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 181 i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
+++.+++++.++.+|++.|.+.++..+++.++
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999998899999999988887777664
No 12
>PRK12382 putative transporter; Provisional
Probab=99.62 E-value=3.6e-14 Score=136.81 Aligned_cols=182 Identities=13% Similarity=-0.024 Sum_probs=143.4
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q 019064 5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT 84 (346)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~ 84 (346)
.+-+.|+...+..+.+....++..++.....+.++.|+.+++|.|..+.+.+.+.+.....++.++.|+++||+ ||||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~ 83 (392)
T PRK12382 5 SQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRS 83 (392)
T ss_pred ccCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHH
Confidence 33344445556677777777777777777778888899999999999999999999999999999999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064 85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL 164 (346)
Q Consensus 85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~ 164 (346)
+.++.++..++.+...+....+... ..+.+.+++++.+.|+|.+...+...+.+.|.+++++ |
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r 146 (392)
T PRK12382 84 ALQGMLACGLAGLAYLLAAILPVSA-----------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------S 146 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhccccch-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------c
Confidence 9998887777655443332222110 2256778899999999999888888888899987543 5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHH
Q 019064 165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 204 (346)
Q Consensus 165 ~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~ 204 (346)
.+.++++..+.++|.++++.+++++.+.+||+..+.+..+
T Consensus 147 ~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 186 (392)
T PRK12382 147 GKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMV 186 (392)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence 7778888888999999999999999888999977665444
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=99.61 E-value=3.6e-14 Score=136.91 Aligned_cols=175 Identities=15% Similarity=0.069 Sum_probs=139.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+|...+.+.+..++.....+.. ..+...+.+++|.+..+.+++.+.+.....++.++.|+++||+ ||||.+.++.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVP-VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHH-HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 34666666666666654444433 3333456778999999999999999988889999999999996 999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++.++...+. +.+.+++++.+.|++.+...+...++..|.+++++ |++.++++
T Consensus 84 ~~~~~~~~~~~~-------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~ 138 (390)
T PRK03545 84 FIASHVLSALAW-------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLL 138 (390)
T ss_pred HHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHH
Confidence 998877766542 46778888999999999888999999999998543 67788888
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
....++|..+++.+.+.+.++.||++.|.+.++..++..+..
T Consensus 139 ~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 139 ATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999888999999998877655554433
No 14
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.61 E-value=4.5e-14 Score=137.06 Aligned_cols=168 Identities=14% Similarity=0.126 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ 97 (346)
++++...++.+++++.+.+.++.|+++++|++..+.+.+...+.....+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999999999999999999999999996 999999999999998887
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++.... +.+.+++.+.+.+++.+...+...+...|.+++++ +++.+++.+...++
T Consensus 92 ~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~~~~ 146 (400)
T PRK11646 92 TMAIAH-------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQDSA 146 (400)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 765431 35677888889999998888999999999887433 67888999999999
Q ss_pred HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
|..+++.+++++. +.||++.|.+.++..++..++
T Consensus 147 g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 147 GAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 689999998877665554443
No 15
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.59 E-value=5.1e-14 Score=133.01 Aligned_cols=174 Identities=13% Similarity=0.093 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM 98 (346)
Q Consensus 19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l 98 (346)
.++...++..++.......++.|.. +++.+..+.+.+.+.+.....++.++.|+++||+ ||||++.++.++..++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 4566777777777777777787776 4799999999999999999999999999999996 9999999999888887776
Q ss_pred HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 019064 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178 (346)
Q Consensus 99 l~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG 178 (346)
+......+ +.+.+.+++++.+.+++.+...+...++.+|.+++++ |.+.++++....++|
T Consensus 81 ~~~~~~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g 140 (365)
T TIGR00900 81 LPFVALLG--------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLF 140 (365)
T ss_pred HHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHH
Confidence 66553211 1256788889999999999999999999999998542 678889999999999
Q ss_pred HHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 179 AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 179 ~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.++++.+.+++.+..||++.|.+.++..+++.+..+
T Consensus 141 ~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 141 YIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998889999999887766655554433
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.58 E-value=8.1e-14 Score=133.78 Aligned_cols=178 Identities=13% Similarity=0.154 Sum_probs=146.9
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q 019064 5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT 84 (346)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~ 84 (346)
.-.+.++.+|+....+.+..+++.+..+.+....+ .+++++|++..+.+.+.+.+.....++.++.|+++||+ |||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~ 79 (405)
T TIGR00891 2 WYRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLP 79 (405)
T ss_pred CCCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence 33445667888888888899999988877655555 56778999999999999999999999999999999996 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064 85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL 164 (346)
Q Consensus 85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~ 164 (346)
+.++.++..++.+++.+.. +.+.+++.+++.|+|.++..+...++..|.+++++ |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~ 134 (405)
T TIGR00891 80 MVTSIVLFSAGTLACGFAP-------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------R 134 (405)
T ss_pred HHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------h
Confidence 9999988888877665532 35678889999999999999999999999998543 5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhccc--hhHHHHHHHHHHHHH
Q 019064 165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIG 209 (346)
Q Consensus 165 ~~~f~~~y~~~niG~~i~~~~~~~i~~~~g--~~~~f~i~~~~~~~~ 209 (346)
....+++....++|..+++.+.+.+.+..+ |++.|.+.++..++.
T Consensus 135 ~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 135 NKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 777888888899999999998888877665 999998765544443
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.58 E-value=9.6e-14 Score=134.50 Aligned_cols=176 Identities=13% Similarity=0.048 Sum_probs=143.1
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
++..|+....+....++.-..-|.....++.+ .+++|++..+.+...+.+.....++.++.|+++||+ |||+.+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 34467776666666565555666666666654 457999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
++..++.++..... +.+.+++.+.+.|++.|...+...++..|.+++++ +.....
T Consensus 93 ~~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~ 147 (394)
T PRK10213 93 VLLTLSCLLVSFAN-------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALS 147 (394)
T ss_pred HHHHHHHHHHHHHC-------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHH
Confidence 99988877765532 46788999999999999999999999999997543 567788
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
+.....++|.++++.+++++.+..||++.|.+.+++.++..+.
T Consensus 148 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 148 VIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999899999998877655544433
No 18
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.58 E-value=7.5e-14 Score=136.06 Aligned_cols=175 Identities=13% Similarity=0.080 Sum_probs=139.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+|+..+++.+..+++......+.. ....+++++|++..+.+++.+++.....++.+++|+++||+ |||+++..+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 4566666666666666555554444 44488899999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
+.++.++..++. +.+.+++++.+.|++.|+..|....+.+|.++++. |....+++
T Consensus 83 ~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~ 137 (412)
T TIGR02332 83 WGIASTATMFAT-------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALF 137 (412)
T ss_pred HHHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 999888776642 35678889999999999999998889999998422 56777888
Q ss_pred HHHHHHHHHHHHhhhhhhhh------ccchhHHHHHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFI------DQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~------~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
....++|.++++.+++++.+ ..||++.|.+.++..++..++.
T Consensus 138 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 138 MIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 88889999999998888753 3699999998776655444433
No 19
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.57 E-value=1.4e-13 Score=131.60 Aligned_cols=176 Identities=16% Similarity=0.105 Sum_probs=142.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
+++..+.+....+...++.....+.++ ++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 445555666666666666655555554 45678999999999999999999999999999999996 9999999999888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++.+++.... +.+.+++.+++.+++.+...+...++..|.+++++ |...+++.+
T Consensus 81 ~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 135 (385)
T TIGR00710 81 ALSSLGLALSN-------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILM 135 (385)
T ss_pred HHHHHHHHHHc-------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHH
Confidence 88877766542 35678888999999999999999999999998433 677888888
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
...++|..+++.+.+++.+..+|+..|.+.++..++..+..+.
T Consensus 136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988899999998877666555554443
No 20
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.57 E-value=1.9e-13 Score=133.29 Aligned_cols=147 Identities=14% Similarity=0.098 Sum_probs=121.1
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc
Q 019064 42 FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG 121 (346)
Q Consensus 42 l~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~ 121 (346)
+.+++|.+..+++..++.+.....++.+++|+++||+ |||+++..+..+..++.++...+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 4557899999999999999999999999999999996 999999999998888877666532
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHH
Q 019064 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 201 (346)
Q Consensus 122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i 201 (346)
+.+.+++++++.|++.+...+...+...|.+++++ +.+.++++....++|..+++.+++++.++.||++.|.+
T Consensus 103 -~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 103 -SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 46778899999999988766666677888888543 45667788888999999999999999888899999998
Q ss_pred HHHHHHHHHHHHH
Q 019064 202 SSVATLIGLIALA 214 (346)
Q Consensus 202 ~~~~~~~~~~i~~ 214 (346)
.++..+++.+..+
T Consensus 176 ~~~~~~i~~~~~~ 188 (413)
T PRK15403 176 IAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666555433
No 21
>PRK10504 putative transporter; Provisional
Probab=99.57 E-value=1.1e-13 Score=136.78 Aligned_cols=179 Identities=10% Similarity=0.028 Sum_probs=146.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
..+..|.+.+..++..+.++.+...++.|.+ ++|.+..+.+++.+.+.....++.+++|+++||+ |||++++.+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 3556788888889999999888888887775 6999999999999999989899999999999996 9999999888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++.++..++. +.+.+++++.+.++|.+...+...+...|.++++ ++...++++.
T Consensus 86 ~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 140 (471)
T PRK10504 86 TLGSLFCALSG-------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHhC-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence 88776655431 3566788899999999999999999999988732 2567778888
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
...++|..+++.+.+++.++.||++.|.+......++.+......+
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999999999998877655555554444333
No 22
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.56 E-value=2.4e-13 Score=131.24 Aligned_cols=177 Identities=13% Similarity=-0.018 Sum_probs=144.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
-++.+..+++..+...++.......++.|+.+++|.+..+.+.+.+.+.....++.++.|+++||+ ||||++.++.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 356777788888888888877888899999999999999999999999999999999999999996 9999999999988
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++.+++.++...+... ..+...+++.+++.|+|.+...++..+...|.+++++ |.+.++++.
T Consensus 92 ~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 154 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWP-----------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNG 154 (399)
T ss_pred HHHHHHHHHhhhhhccc-----------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhh
Confidence 88766655543211100 1245678889999999999999999999999987544 566777777
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~ 207 (346)
...++|..+++.+++++.+..||+..+.+..+..+
T Consensus 155 ~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 155 IATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred hhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 88889999999999998888999988876655443
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.56 E-value=1.8e-13 Score=132.65 Aligned_cols=175 Identities=16% Similarity=0.143 Sum_probs=133.7
Q ss_pred CchHHHHHHHHHHHHHHHHH---HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFI---ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~y---gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+.+..++++...+.+-..++ .+...++. +.+++|.+..+.+...+.+.....++.++.|+++||+ ||||.+.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 35556666665555554443 33344443 4568999999999999999999999999999999996 9999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.+..++.++..... +.+.+++.+++.|++.+...+...+...|.++++. +.+..+
T Consensus 86 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 140 (406)
T PRK15402 86 AFFILTCLAILLAQ-------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA 140 (406)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence 88888776655432 35667888899999998888888888899987543 445566
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+.+....+|..+++.+.+++.++.+|++.|.+.++..+++.+...
T Consensus 141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 666677788899999999998889999999887776665555433
No 24
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.55 E-value=2.2e-13 Score=131.37 Aligned_cols=174 Identities=11% Similarity=0.081 Sum_probs=137.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
|++.+|..+.+....++..++.....+.++ ++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~ 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGM 80 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHH
Confidence 445677777777777777777665555555 45578999999999999999999999999999999996 9999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.+..++.++..... +.+.+++.+++.+++.+...+....+..|.+++++ +....+
T Consensus 81 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 135 (394)
T PRK11652 81 SIFILGTLVALFAH-------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANS 135 (394)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHH
Confidence 88888877655431 35678888999999988877777778888776432 456666
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~ 210 (346)
++..+..+|..+++.+.+++.+..||+..|.+.++..++..
T Consensus 136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence 77778888999999999999888899999988766554433
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.54 E-value=2.6e-13 Score=135.41 Aligned_cols=177 Identities=12% Similarity=0.008 Sum_probs=144.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
.|.....+++..++..+..-.+...++.. .+++|.+..+.+++.+.|......+.+++|+++||+ |||+++.++..+.
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 35566777777777777776666666654 568999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++.++...+. +.+.+++++.+.|+|.++..+.....+.+.+.++ + +|...++++.
T Consensus 82 ~~~~~~~~~a~-------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~--~---~r~~~~g~~~ 137 (495)
T PRK14995 82 GLASLAAAFSP-------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE--K---QRNMALGVWA 137 (495)
T ss_pred HHHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--H---HHHHHHHHHH
Confidence 99988777542 4678899999999999999888888787877532 1 2678889999
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
...++|..+|+.+++++.++.||++.|.+...+.++.+++...
T Consensus 138 ~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 138 AVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876655555444333
No 26
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.53 E-value=4.8e-13 Score=129.41 Aligned_cols=177 Identities=16% Similarity=0.137 Sum_probs=142.2
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064 8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV 87 (346)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~ 87 (346)
++.+.+|..........+++.+..+.....++ .+.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~ 85 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIV 85 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHH
Confidence 33345566667777777788777766655555 45567999999999999999999999999999999996 99999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
+.++..++.+++.+.. +.+.+++.+.+.+++.+...+...++..|.+++++ |.+.
T Consensus 86 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 140 (406)
T PRK11551 86 SVALFGLFSLATAQAW-------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTA 140 (406)
T ss_pred HHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 9888877766555431 35677888999999999999999999999997433 6778
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 168 FNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 168 f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
+++++...++|..+++.+...+.+..+|+..|.+.+++.++..+
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 88888899999999999888888888999999887665544443
No 27
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.53 E-value=2.6e-13 Score=133.08 Aligned_cols=166 Identities=11% Similarity=0.071 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+..++..++..+..+.....++.+. +++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 33444445555444445555555555 46999999999999999999999999999999996 99999999999988887
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+++..+. +.+.+++.+++.+++.|...+...++..|++++++ |+..+++++...+
T Consensus 103 ~~~~~~~-------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~ 157 (434)
T PRK11663 103 ILFGFSS-------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHN 157 (434)
T ss_pred HHHHHHh-------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 7666542 45667777888899999888999999999998432 6778888888999
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIG 209 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~ 209 (346)
+|+.+++.+.+++.+.+||++.|.+.++..++.
T Consensus 158 ~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 158 VGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 999999999999998899999998877654433
No 28
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.52 E-value=4.5e-13 Score=130.44 Aligned_cols=168 Identities=10% Similarity=0.099 Sum_probs=139.0
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
+.+++......+..+.+.+.++.. ..+..++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 445666666667777777777655 4444567788999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..++.++..++. +.+.+++++++.|+|.|+..+...++..|.++++. |....++
T Consensus 92 ~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~ 146 (426)
T PRK12307 92 AYSVGTGLSGLAS-------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAF 146 (426)
T ss_pred HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhH
Confidence 9999887766542 46778899999999999999999999999998543 5667777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHH
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~ 205 (346)
+..+.++|.++++.+.+++.+..||++.|.+.++.
T Consensus 147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 88889999999998888888889999999875543
No 29
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.50 E-value=9.5e-13 Score=125.14 Aligned_cols=164 Identities=10% Similarity=0.033 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
..+..+...++....++...+.++.|+++++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345566666666777777777777789999999999999999999999999999999999996 9999999999999998
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
.+++.... .+.+.+++++++.+++.+.. +...++.+|.+++++ |....+++....
T Consensus 81 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 135 (366)
T TIGR00886 81 CLWAGLAV------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGWG 135 (366)
T ss_pred HHHHHHHh------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHHh
Confidence 87766542 03567778888999986544 556788999987543 566677777677
Q ss_pred HHHHHHHHhhhhhhhh----------ccchhHHH-HHHHHH
Q 019064 176 TLAAMIGVTAIVYVFI----------DQGWWLGF-LISSVA 205 (346)
Q Consensus 176 niG~~i~~~~~~~i~~----------~~g~~~~f-~i~~~~ 205 (346)
++|..+++.+.+.+.. +.+|++.| .+.++.
T Consensus 136 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 136 NMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 7887777776655543 34899998 443433
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.50 E-value=8.4e-13 Score=127.16 Aligned_cols=174 Identities=13% Similarity=0.093 Sum_probs=141.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
++.++.+....++-..+.+.....++. +.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 456777777888877777777666654 5568999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.++...+. +.+.+++.+++.|++.|...+...++..|.+++++ +.+.++.+..
T Consensus 80 ~~~~l~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 134 (382)
T PRK10091 80 IGNAMFTLSS-------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVS 134 (382)
T ss_pred HHHHHHHHhC-------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHH
Confidence 8887766542 46778889999999999888888888888876432 4556667777
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++|..+++.+++++.+..||++.|.+.++..++..+...
T Consensus 135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999989998889999999988776555544333
No 31
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.50 E-value=9.8e-13 Score=126.44 Aligned_cols=150 Identities=12% Similarity=0.047 Sum_probs=114.3
Q ss_pred HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~ 115 (346)
......+.+++|++..+.+.+.+.+.....++.++.|+++||+ |||+++.........+.. ....+
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------ 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------ 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh------------
Confidence 4444566678999999999999999999999999999999996 999876655444444322 12211
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~ 195 (346)
.+...+++++++.|+|.+.. .+..+..+|.+++++ |.+..+....+.++|.++++.+++++.++.||
T Consensus 77 ------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW 143 (368)
T TIGR00903 77 ------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYTAGGL 143 (368)
T ss_pred ------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccch
Confidence 14678999999999999864 444455688887432 67888888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 019064 196 WLGFLISSVATLIGLIA 212 (346)
Q Consensus 196 ~~~f~i~~~~~~~~~~i 212 (346)
|..|.+.+++.++..++
T Consensus 144 r~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 144 QLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998866654444443
No 32
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.50 E-value=1.8e-12 Score=126.92 Aligned_cols=169 Identities=15% Similarity=0.168 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccC---CchhHHHHHHHHHHHHHH---HHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 22 VLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFFGSTF---LLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 22 ~~~~~e~~a~ygv~~~l~~yl~~~lg---~s~~~a~~~~~~~~~~~~---~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
+..++|.+.+.. ...+..++.++++ .+..+.+.+...+..... ++.+++|+++||+ ||||++.++.+++.++
T Consensus 29 ~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 345666666654 4555667777774 455544444444444433 7888999999996 9999999999999998
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
.++..++ |+... ........+++.+++.|+|.|+..+...++++|.+++++ |+...+..+...
T Consensus 107 ~~~~~~~---~~~~~--------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~ 169 (432)
T PRK10406 107 SLVIACL---PGYET--------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTL 169 (432)
T ss_pred HHHHhhc---CCchh--------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHH
Confidence 8776654 32110 001134568889999999999999999999999998654 456677777778
Q ss_pred HHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHHH
Q 019064 176 TLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLIG 209 (346)
Q Consensus 176 niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~~ 209 (346)
+.|.+++..+...+. ..+|||..|.+.++..++.
T Consensus 170 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 170 IGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 888887776554443 2579999999876655443
No 33
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=8e-13 Score=131.30 Aligned_cols=170 Identities=14% Similarity=0.197 Sum_probs=139.6
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
+.+|+....+.+..++..+.+..+.. +..++.+++|++..+++.+.+.+.....++.+++|+++||+ |||+++.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 44567777777777777777765544 44567788999999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..++.+++.+.. +.+.+++.+.+.|++.++..+...++..|.+++++ +...++.
T Consensus 94 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 148 (496)
T PRK03893 94 LFSVGTLACGFAP-------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGF 148 (496)
T ss_pred HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 9888887776542 46678888999999999999999999999998432 5667777
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~ 207 (346)
++...++|..+++.+.+++.++.||++.|.+.++..+
T Consensus 149 ~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 149 LISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 8888999999999999999899999999987544333
No 34
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=7.2e-13 Score=126.63 Aligned_cols=173 Identities=17% Similarity=0.136 Sum_probs=137.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+|+.....+...++..+.++... ....++.+++|.+..+++.+.+.+.....++.++.|+++||+ |||+++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMG-FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHH
Confidence 345555555566666666555443 444566678999999999999999999999999999999996 999999999888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++.+++.... +.+.+++.+++.+++.+...+...++.+|.++++. |+..++++
T Consensus 92 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 146 (398)
T TIGR00895 92 FSVFTLLCALAT-------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLM 146 (398)
T ss_pred HHHHHHHHHHcc-------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhH
Confidence 888776655431 35667888999999999999999999999997432 67788888
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
....++|..+++.+.+++.+..||+..|.+.++..++..+
T Consensus 147 ~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 147 FCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred hhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence 8899999999999999999889999999887544443333
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.49 E-value=5.8e-13 Score=131.62 Aligned_cols=172 Identities=8% Similarity=0.077 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
....+++..+...+....+...+ .++.+++|.+..+.+++.+.+.....++.+++|+++||+ |||+++.++.++..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34455556666666655444444 456678999999999999999999999999999999996 9999999999999988
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
.++...+. +...+++++++.|+|.+...+...+++.|.+++++ |...+++++...
T Consensus 81 ~~~~~~~~-------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~ 135 (485)
T TIGR00711 81 SLLCGVAP-------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTV 135 (485)
T ss_pred HHHHhCcC-------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHH
Confidence 77765432 46678899999999999999999999999998432 677888888899
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
++|..+++.+++++.+++||++.|.+.+...++..++..
T Consensus 136 ~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 136 LVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred HHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999887665554444333
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.48 E-value=4.2e-12 Score=124.84 Aligned_cols=156 Identities=15% Similarity=0.052 Sum_probs=117.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+++....+..+.+.-+..-+........++ .+++.+|.+..+++...+.+.....++.++.|.++||+ |||+++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~ 98 (438)
T PRK10133 21 SRSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGL 98 (438)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 344455556666666666666655555555 45889999999999999999999999999999999996 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.++.+|.+++..... ..+...+++++++.|+|.|...+...++++|..+++. +....+
T Consensus 99 ~~~~~~~~l~~~~~~----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s 156 (438)
T PRK10133 99 FLYALGAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLN 156 (438)
T ss_pred HHHHHHHHHHHHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHH
Confidence 999999877643221 1246788999999999999999999999998644322 222344
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 019064 170 FYLFATTLAAMIGVTAIVYV 189 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i 189 (346)
.+.....+|..+++.+++.+
T Consensus 157 ~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 157 LAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 55556667777777665543
No 37
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.48 E-value=1.9e-12 Score=121.13 Aligned_cols=169 Identities=20% Similarity=0.200 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ 97 (346)
+.+....+++.++++.....++.|.+ ++|.+..+.+.+.........++.++.|+++||+ |||+++.++..+..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 34566778888888888888888775 5799999999999999999999999999999996 999999999999999887
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++.+.. +.+.+++++.+.+++.+...+...++..|.+++++ |...+++.+...++
T Consensus 80 ~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 80 LLAFAS-------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 766541 46778889999999999999999999999998644 67888888999999
Q ss_pred HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
|..+++.+.+.+.+..+|+..|.+.++..+++.++.
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998899999988777665554443
No 38
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=3.1e-12 Score=124.06 Aligned_cols=172 Identities=8% Similarity=0.009 Sum_probs=135.8
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q 019064 7 GIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL 86 (346)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~ 86 (346)
+..|.|-||.+....+..++-.++.+.....++.|+ +++|.+..+++.+.+.+.....++.++.|+++||+ ||||++.
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~ 82 (402)
T TIGR00897 5 NLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMM 82 (402)
T ss_pred cHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHH
Confidence 345678889999999999999999887778888888 46899999999999999999999999999999996 9999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
.+..+..++.+++.+.+. . ..+.+.+++.+.+.|+|.+...+...+...|.+++++ +.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~-~--------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~ 141 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGL-G--------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSS 141 (402)
T ss_pred HHHHHHHHHHHHHHHHhc-c--------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHH
Confidence 999998888665433221 0 1135566777888899888777777777888877432 577
Q ss_pred HHHHHHHHHHHHH-HHHHhhhhhhhhccchhHHHHH
Q 019064 167 YFNFYLFATTLAA-MIGVTAIVYVFIDQGWWLGFLI 201 (346)
Q Consensus 167 ~f~~~y~~~niG~-~i~~~~~~~i~~~~g~~~~f~i 201 (346)
..+++..+.++|. .+++.+.+++.+..||+..+..
T Consensus 142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~ 177 (402)
T TIGR00897 142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence 7788888888886 5788888888888886544443
No 39
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.47 E-value=6.8e-13 Score=135.98 Aligned_cols=199 Identities=13% Similarity=0.152 Sum_probs=152.0
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+...+|.+.+.+....+....+.+.......-+.++++++..+.+.+.+.+.+...++.++.|+++||+ ||+|.+.+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ 105 (633)
T TIGR00805 27 LFSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGC 105 (633)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecH
Confidence 344566665556556666667778888888888899999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHhhhccCC----------------CCCCCCCC------------CCCCCch----hHHHHHHHHHHHHHh
Q 019064 90 TLEVLSLVMLTIQAYSKS----------------LHPPDCGK------------SSCLKGA----IAAYFYGSLYLYSLG 137 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~----------------~~~~~~~~------------~~~~~~~----~~~~~~~~l~l~~iG 137 (346)
+++.+|.+++++..++.. ..+..|.. ..|.+.. ....+++++++.|+|
T Consensus 106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG 185 (633)
T TIGR00805 106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG 185 (633)
T ss_pred HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence 999999998877532110 01112311 0232211 356778999999999
Q ss_pred ccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc----------------------ch
Q 019064 138 CGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ----------------------GW 195 (346)
Q Consensus 138 ~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~----------------------g~ 195 (346)
.+...+...+++.|.+++++ +...+++++.+..+|.++|+.+++++.+.+ +|
T Consensus 186 ~~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaW 259 (633)
T TIGR00805 186 ATPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAW 259 (633)
T ss_pred CCcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHH
Confidence 99999999999999998654 577888899999999999999988876532 28
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 019064 196 WLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 196 ~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+|.+.+++.++..+.++.
T Consensus 260 wl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 260 WIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 88998877766555444433
No 40
>PRK11043 putative transporter; Provisional
Probab=99.47 E-value=2.3e-12 Score=124.57 Aligned_cols=170 Identities=18% Similarity=0.221 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHH--cccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 19 FVFVLSALENMGFIANGISMVLY--FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 19 ~i~~~~~~e~~a~ygv~~~l~~y--l~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
+++...+.-..++.+....+|.+ +.+++|.+..+++.+.+.+.....++.++.|+++||+ |||+++..+..+..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 7 FLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHH
Confidence 34444444555555555555544 6678999999999999999999999999999999996 99999999988888877
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
++..... +.+.+++++++.|+|.+...+...++..|.++++. +.+.++......+
T Consensus 86 ~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 140 (401)
T PRK11043 86 LGMLWVE-------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVA 140 (401)
T ss_pred HHHHHhc-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHH
Confidence 6655432 35677888889999988887878888899887542 3555666666788
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+|..+++.+++++.+.+||+..|.+.++..++..+..+
T Consensus 141 ~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 141 LSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999989999999887766655544433
No 41
>PRK03699 putative transporter; Provisional
Probab=99.47 E-value=4.2e-12 Score=122.78 Aligned_cols=175 Identities=14% Similarity=0.144 Sum_probs=137.9
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
..++|..+......++.....+.....++. +.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 456677887777777777777666666665 5568999999999999999999999999999999996 99999999988
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..++.+++.+.. +.+.+++.+.+.+++.|...+...+.+.|.+++++ |....+.
T Consensus 81 ~~~i~~~l~~~~~-------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~ 135 (394)
T PRK03699 81 LMILAVAGLMFSH-------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLF 135 (394)
T ss_pred HHHHHHHHHHHcc-------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHH
Confidence 8888877666531 45678888999999999999999999999997543 4555556
Q ss_pred HHHHHHHHHHHHHhhhhhhh-hccchhHHHHHHHHHHHHHHHH
Q 019064 171 YLFATTLAAMIGVTAIVYVF-IDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~-~~~g~~~~f~i~~~~~~~~~~i 212 (346)
.+...++|+.+++.+.+++. +..||++.|.+.++..++..++
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 136 TDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 66677888888888877764 4579999998877655544443
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.47 E-value=2.5e-12 Score=122.53 Aligned_cols=170 Identities=14% Similarity=0.069 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH-HHHHHHHHHHH
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF-GTLEVLSLVML 99 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~-~~l~~~G~~ll 99 (346)
++..++-.+++....+.++.|+.+++|.+..+.+.+.+.+.....+..++.|.++||+ ||||.+++. ..+..++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4557778888888889999999999999999999999999999999999999999996 998876554 44444454444
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~ 179 (346)
..+. +.+.+++...+.+.+.+...|...++..|..++++ +.+..+.++.....++|.
T Consensus 82 ~~~~-------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~ 138 (375)
T TIGR00899 82 AWNR-------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG----REAVMFSSVMRAQISLAW 138 (375)
T ss_pred Hhcc-------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc----hhhHHHHHHHHHHHhHHH
Confidence 3321 34556666667777777777777777777665332 112223566677789999
Q ss_pred HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.+++.+++++.+..||++.|.+.++..++..++.+
T Consensus 139 ~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 139 VIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred HHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999998889999999988776655554443
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=9e-13 Score=125.18 Aligned_cols=152 Identities=15% Similarity=0.151 Sum_probs=128.9
Q ss_pred HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (346)
Q Consensus 37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~ 116 (346)
....++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++..++.++.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence 334457788999999999999999999999999999999996 999999999998888877766542
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchh
Q 019064 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW 196 (346)
Q Consensus 117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~ 196 (346)
+.+.+++++++.|+|.+...+...++..|.+++++ |.+.++++....++|.++++.+.+++.++.+|+
T Consensus 81 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 148 (399)
T TIGR00893 81 ------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ 148 (399)
T ss_pred ------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence 46778899999999999999999999999998432 678888889999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019064 197 LGFLISSVATLIGLIALA 214 (346)
Q Consensus 197 ~~f~i~~~~~~~~~~i~~ 214 (346)
+.|.+.++..++..++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 149 WAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999887766555544433
No 44
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.46 E-value=2e-12 Score=122.51 Aligned_cols=150 Identities=17% Similarity=0.135 Sum_probs=122.7
Q ss_pred HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~ 115 (346)
..+.+++.+++|++..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++.++..++.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------
Confidence 4566788889999999999999999999999999999999996 999999999999999887766543
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~ 195 (346)
+.+.+++++.+.|+|.+...+...+...+.++++ |+...+++....++|.++++.+.+.+.+..||
T Consensus 90 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (377)
T TIGR00890 90 -------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDK-------RGLASGIIIGGYGLGSFILSPLITSVINLEGV 155 (377)
T ss_pred -------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcc-------cHHHHHHHHHhcchhHhHHHHHHHHHHhcccH
Confidence 4677888888999999988888878777777632 46677788888889988776666667677899
Q ss_pred hHHHHHHHHHHHHHHHH
Q 019064 196 WLGFLISSVATLIGLIA 212 (346)
Q Consensus 196 ~~~f~i~~~~~~~~~~i 212 (346)
++.|.+.++..++..+.
T Consensus 156 ~~~f~~~~~~~~~~~~~ 172 (377)
T TIGR00890 156 PAAFIYMGIIFLLVIVL 172 (377)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999877766554443
No 45
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.46 E-value=2e-12 Score=123.69 Aligned_cols=153 Identities=13% Similarity=0.156 Sum_probs=127.2
Q ss_pred hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064 34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (346)
Q Consensus 34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~ 113 (346)
..+.++.+.+ ++|.+..+++.+.+.+.....++.+++|+++||+ |||+++.++.++..++..++....
T Consensus 10 ~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 3455666654 6899999999999999999999999999999996 999999999999888877766542
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019064 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ 193 (346)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~ 193 (346)
+.+.+++.+++.+++.+...+...++..|.+++++ |.+.+++.+...++|..+++.+.+++.+..
T Consensus 78 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 78 ---------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35667788889999999999999999999987543 677888888899999999999999998889
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 019064 194 GWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 194 g~~~~f~i~~~~~~~~~~i~ 213 (346)
+|++.|.+.++..++..+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALV 162 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 99999988776655554433
No 46
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.46 E-value=2.3e-12 Score=124.78 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
+.+.-|-.++.+...++ .+.+++|+|..+.+++.+.+.....++.++.|+++||+ |||+++..+..+..+|.++..++
T Consensus 17 ~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 17 IGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred HHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence 33334444455555555 56678999999999999999999999999999999996 99999999999999998887765
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 019064 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG 182 (346)
Q Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~ 182 (346)
. +.+.+++++++.|+|.+...++......|.++++ |....+.+..+.+.|..++
T Consensus 95 ~-------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 P-------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQR-------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred c-------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcccc-------chhHHHHHHHHHHHHHHHH
Confidence 2 3566788999999999999999999988888632 4667777777888999999
Q ss_pred Hhhhhhhhhcc-chhHHHHHHHHHHHHHHH
Q 019064 183 VTAIVYVFIDQ-GWWLGFLISSVATLIGLI 211 (346)
Q Consensus 183 ~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~ 211 (346)
+.+++++.++. +|+..+.+.++..++.++
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999888775 899887665444443333
No 47
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.46 E-value=3.9e-12 Score=122.79 Aligned_cols=171 Identities=16% Similarity=0.041 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHH-----HHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGA-----SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a-----~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
|....+++..++..+++......++.|++ ++|.+..++ +.+.+.+.....++.++.|+++||+ |||+++..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 44667778888889998888888888886 488876543 6677788888899999999999996 9999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
++..++.+++.... +.+.+++.+.+.+++.+ ..+...+...|++++++ +....+
T Consensus 92 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~ 145 (408)
T PRK09874 92 LGMGIVMVLMGLAQ-------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWALG 145 (408)
T ss_pred HHHHHHHHHHHHHh-------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHHH
Confidence 88888776655432 45677888888888754 45777778888886432 566777
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
.+....++|.++++.+.+++.+..+|+..|.+.++..++..+..
T Consensus 146 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (408)
T PRK09874 146 TLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVT 189 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 77888899999999999999888999999988877665555443
No 48
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.45 E-value=6.2e-12 Score=121.24 Aligned_cols=166 Identities=13% Similarity=0.165 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q 019064 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (346)
Q Consensus 20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll 99 (346)
..+..+..-.++......++. +.+++|.+..+.+...+.+.....++.++.|+++||+ |||+.+.++.++..++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHH
Confidence 344444445555444444554 4567999999999999999989999999999999996 99999999998888887766
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~ 179 (346)
.... +.+.+++++.+.+++.+...+...++..|.+++++ |.+.+++.+...++|.
T Consensus 86 ~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~~ 140 (392)
T PRK10473 86 SLAE-------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCIIP 140 (392)
T ss_pred HHhC-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHH
Confidence 5432 34567778889999999888888999999987433 6777888888889999
Q ss_pred HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
.+++.+.+++.+..||+..|.+.++..++..++
T Consensus 141 ~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 141 VLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 999999888888889999998877655544443
No 49
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.44 E-value=7e-12 Score=119.72 Aligned_cols=182 Identities=16% Similarity=0.083 Sum_probs=157.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
++..|..++.+-+..|+-..+=+.+...++ -+.+++|.+..+++..++.|.....++.|+-..+.||+ .||+.++..+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence 455677777777778877777766666665 45568999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.+..+|.++..++. +++.+.+++++.++..|.+.+...+..+|..|+++ +.+...
T Consensus 86 ~lFi~~n~l~alAp-------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aia 140 (394)
T COG2814 86 ALFIVSNLLSALAP-------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALA 140 (394)
T ss_pred HHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHH
Confidence 99999999888763 57899999999999999999999999999999765 677888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
..+.+..++..+|..++.++.+.+|||..|.+.+++.+++++..+...|
T Consensus 141 iv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 141 LVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888899999999999999999999999999888877777777776666
No 50
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.43 E-value=9.2e-12 Score=121.42 Aligned_cols=173 Identities=15% Similarity=0.105 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+.+...-+...+.+ ++...+...+++++|++..+++.+.+.+.....++.++.|++.||+ |||+++.++.++..+|.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444555555555555 5555666677889999999999999999999999999999999996 99999999999999998
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
.++..++. ..+.+.+++++++.|+|.|...+...++..+..++++ +.+..+......+
T Consensus 83 ~l~~~~~~----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 140 (410)
T TIGR00885 83 FLFWPAAE----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNP 140 (410)
T ss_pred HHHHHHHh----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHH
Confidence 77654431 1246788899999999999999999999988876443 3444666667788
Q ss_pred HHHHHHHhhhhhhhh--------------------------ccchhHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFI--------------------------DQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 177 iG~~i~~~~~~~i~~--------------------------~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
+|..+++.+.+.+.. ..+|+..|.+.++..++..+++
T Consensus 141 lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 141 FGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776532 2469999987766554444333
No 51
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.43 E-value=5.8e-12 Score=121.22 Aligned_cols=155 Identities=9% Similarity=0.080 Sum_probs=131.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.|..+.++...++..+++..+...++.|++ ++|.+..+++.+.+.+.....+++++.|+++||+ |||+++..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 467889999999999999888889998887 5799999999999999999999999999999996 99999999999988
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++..+...+. +.+.+++++++.|++.+...+...+...|..++++ |++.++++..
T Consensus 83 ~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 137 (381)
T PRK03633 83 AGCAGLGLMV-------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYMM 137 (381)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 8877666532 46778889999999999988887777777766432 5778888888
Q ss_pred HHHHHHHHHHhhhhhhhhccch
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~ 195 (346)
..++|..+++.+.+++.+...+
T Consensus 138 ~~~~g~~~g~~~~~~l~~~~~~ 159 (381)
T PRK03633 138 VYYLGTVLGQLLVSKVSTELMS 159 (381)
T ss_pred HHHHHHHHHHHHHhcccccccc
Confidence 9999999999999988765433
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.43 E-value=1.3e-11 Score=119.50 Aligned_cols=184 Identities=15% Similarity=0.121 Sum_probs=125.7
Q ss_pred cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchh
Q 019064 5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFA 83 (346)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~ 83 (346)
++..+-+.-.+..+..++..++.+++...+.+.++.|+++++|.+..+.+.+.+.... ...+.++++|+ +||+ ||||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~ 82 (393)
T PRK15011 5 PAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRK 82 (393)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchh
Confidence 3333333345677788888999999999999999999999999999999998776544 55556666677 9996 9988
Q ss_pred HHH-HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHH-HHHHHHHHhccccccchhhhccCCCCCCChhhh
Q 019064 84 TCL-VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY-GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGA 161 (346)
Q Consensus 84 ~i~-~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~ 161 (346)
.++ .+.++..++..++.++. +.+.++ +++.+.+++ +...|...++..|..++++ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~ 139 (393)
T PRK15011 83 SLIVFCCLLGVLACTLFAWNR-------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG---R 139 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc---c
Confidence 755 44444445554444331 233333 334444443 3556677777777655332 1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 162 KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 162 ~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
....+.++.....++|.++++.+++++.++.||+..|.+.++..++..+..+
T Consensus 140 -~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 191 (393)
T PRK15011 140 -EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVW 191 (393)
T ss_pred -hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 1223345677789999999999999999889999999888766555544433
No 53
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.42 E-value=1.4e-12 Score=123.64 Aligned_cols=151 Identities=11% Similarity=0.049 Sum_probs=125.2
Q ss_pred HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (346)
Q Consensus 37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~ 116 (346)
....++.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.+++....
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 81 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------- 81 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence 344577788999999999999999999999999999999996 999999999999988887776542
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-hhhhhhhhccch
Q 019064 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV-TAIVYVFIDQGW 195 (346)
Q Consensus 117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~-~~~~~i~~~~g~ 195 (346)
+.+.+++.+++.+++.+...+...++..|.+++++ |...+++.....++|..+++ .+...+.+..+|
T Consensus 82 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 82 ------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred ------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 45778889999999999999999999999998543 56677777888899999998 566677777899
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 019064 196 WLGFLISSVATLIGLIAL 213 (346)
Q Consensus 196 ~~~f~i~~~~~~~~~~i~ 213 (346)
+..|.+.+++.++..++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 999988776655444433
No 54
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.42 E-value=1.1e-11 Score=120.21 Aligned_cols=166 Identities=9% Similarity=0.039 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|..+.++...++..++...+...++.. ..++|.+..+.+++.+.+.....++.+++|+++||+ ||||+++++..+..+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 345667777788777665555555544 568899999999999999999999999999999996 999999999999888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++.... + .++.+.+.|++.++..|...+++.|.+++++ +.+..++....
T Consensus 81 ~~~~~~~~~-------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~ 132 (393)
T PRK11195 81 GCLLMLFGI-------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS 132 (393)
T ss_pred HHHHHHHHH-------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 766654321 1 1566788999999999999999999998533 67888888888
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
.++|.++|+.+++++.+. .|+..+.+.+.+.+++.+
T Consensus 133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~ 168 (393)
T PRK11195 133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL 168 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 899999999999998874 477777766555444433
No 55
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.41 E-value=5.3e-12 Score=122.90 Aligned_cols=176 Identities=16% Similarity=0.142 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
...++...++..++.......++.+. ++++.+..+++.+.+.+.....++.++.|+++||+ |||+.+.++..+..++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGF 96 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHH
Confidence 33444456666666655555566555 45778999999999999999999999999999996 99999998888877776
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+++.+....+ ..+.+.+++.+++.+++.+...++..+...|.+++++ +.+..+..+...+
T Consensus 97 ~~~~~~~~~~--------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 156 (417)
T PRK10489 97 IGLALNAFLP--------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTVR 156 (417)
T ss_pred HHHHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHHh
Confidence 6654422111 1135667778888888888888888888888887432 5666777788899
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+|..+|+.+++++.+..+|++.|.+.++..+++.+..+
T Consensus 157 ~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 157 LGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888999999887766655554433
No 56
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=6e-12 Score=130.34 Aligned_cols=154 Identities=9% Similarity=0.075 Sum_probs=121.1
Q ss_pred HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019064 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (346)
Q Consensus 35 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~ 114 (346)
...+.+++..++|++..+.+++.+.+..+..++.+++|+++||+ |||+++++++++..++.++..++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44555677778999999999999999999999999999999996 999999999988888877665542
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc--
Q 019064 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-- 192 (346)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-- 192 (346)
+.+.+++++++.|+|.|+..+...++++|.++.+. |+..++++.....+|.++++.++..+...
T Consensus 254 --------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 254 --------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46778889999999999999999999999998432 56677777777788888877665444322
Q ss_pred -----------cchhHHHHHHHHHHHHHHHHHH
Q 019064 193 -----------QGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 193 -----------~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.+|++.|++.++..+++++..+
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT 352 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3688888877666555544433
No 57
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.40 E-value=1e-11 Score=121.07 Aligned_cols=183 Identities=10% Similarity=-0.070 Sum_probs=120.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.+..|.+.+..++..++++.+.+.++.|+++++|++..+.+.+.+.+.....+++++.|+++||+ |||++++++..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 45777878888888898988999999999999999999999999999999999999999999996 99999988766655
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++...+......+.. ......+..+.++..+.......+...+..++. .+.+...++....
T Consensus 88 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~ 148 (420)
T PRK09528 88 VLFGPFFIYVFAPLL---------------QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV----SRRSGFEYGRARM 148 (420)
T ss_pred HHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH----HhhccccchhhHH
Confidence 544322221100000 001112222223333322222222222222111 1113344555566
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
..++|..+++.+.+++.+ .+|+..|.+.++..++++++.+..+
T Consensus 149 ~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 149 WGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred hhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccc
Confidence 689999999999998876 5899999887766665555554433
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.40 E-value=9.4e-12 Score=122.90 Aligned_cols=145 Identities=10% Similarity=0.037 Sum_probs=121.8
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (346)
Q Consensus 45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~ 124 (346)
+++++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.++...... ...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 131 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-----------------GGI 131 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH-----------------cCc
Confidence 6889999999999999999999999999999996 9999999999888887766544321 124
Q ss_pred HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHHH
Q 019064 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLISS 203 (346)
Q Consensus 125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~ 203 (346)
..+++.+++.|++.+...+....+.+|.+++++ |+...++++.+.++|.++++.+.+++.+.. ||+..|.+.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 568889999999999999999999999998433 678888888899999999999999998884 9999999887
Q ss_pred HHHHHHHHHH
Q 019064 204 VATLIGLIAL 213 (346)
Q Consensus 204 ~~~~~~~~i~ 213 (346)
+..++..+++
T Consensus 206 ~~~~~~~~~~ 215 (465)
T TIGR00894 206 IVGCAWSLLW 215 (465)
T ss_pred HHHHHHHHHH
Confidence 7655444433
No 59
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=9.5e-12 Score=120.31 Aligned_cols=171 Identities=13% Similarity=0.119 Sum_probs=130.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.+..+.+.+..++.-.+++++..+++.|+++.+|++..+++.+.+.+.....++.+++|+++||+ ||++.+.....+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~ 282 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLAL 282 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHH
Confidence 34566677777777888889999999999999999999999999998889999999999999996 99998887766655
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++..++... + +.....+..++.+++.++..+...++..|+.+++. ....++.+.
T Consensus 283 ~~~~~~~~~---~----------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~ 336 (394)
T PRK03699 283 VLMYLFVNT---D----------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVAS-------PKLVNFILT 336 (394)
T ss_pred HHHHHHHHc---C----------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-------HHHHHHHHH
Confidence 554433321 1 12334445667778778888888888888776443 233566677
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
+.++|+.+++.+.+++.+..|++..|.+.+++.+++.+
T Consensus 337 ~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 337 CGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 78999999999999999999999998876666555543
No 60
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=5e-12 Score=123.42 Aligned_cols=143 Identities=15% Similarity=0.245 Sum_probs=118.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHH
Q 019064 48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYF 127 (346)
Q Consensus 48 ~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 127 (346)
.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++.++..+... ..+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 130 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF----------------ALSVEML 130 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHH
Confidence 4488999999999999999999999999996 9999999999999988877765431 1234678
Q ss_pred HHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhhccchhHHHHHHHH
Q 019064 128 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI---VYVFIDQGWWLGFLISSV 204 (346)
Q Consensus 128 ~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~---~~i~~~~g~~~~f~i~~~ 204 (346)
++++++.|+|.|...+...++.+|.+++++ |...+++++...++|.++++.+. ....+..+|++.|.+.++
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 899999999999999999999999998544 56778888889999999999988 666677899999998665
Q ss_pred HHHHHHHHH
Q 019064 205 ATLIGLIAL 213 (346)
Q Consensus 205 ~~~~~~~i~ 213 (346)
..++.++..
T Consensus 205 ~~~~~~~~~ 213 (481)
T TIGR00879 205 PAGLLFLGL 213 (481)
T ss_pred HHHHHHHHH
Confidence 554444433
No 61
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.39 E-value=1.6e-11 Score=118.67 Aligned_cols=178 Identities=11% Similarity=-0.037 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.+|......++...++....+.++.|+++++|++..+.+.+.+.+.....++.+++|+++||+ |||+.++.+.....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4678888889999999999999999999999999999999999999999999999999999996 999999887776665
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+...+......+... ......+.++.++.+++.+...+...++..|.-++ +...++.....
T Consensus 81 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~ 141 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQ-----------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKARMF 141 (396)
T ss_pred HHHHHHHHHhhhHHH-----------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchhhhh
Confidence 443322211101000 01123345556677888887777777766553221 12345566677
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
.++|.++++.+++.+.+ .+|+..|.+.+++.++..++.
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence 89999999999888865 699999988776655544333
No 62
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.39 E-value=2e-11 Score=121.31 Aligned_cols=173 Identities=11% Similarity=0.082 Sum_probs=124.0
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
++++.........++..+..+++... ..++.+++|++..+.+++...+.....++.+++|+++||+ |||+++..+.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~ 110 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLML 110 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34556666666666666666655443 4466788999999999988888888888999999999996 999999998888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++.++...+. +...+++.+++.|++.+...+ ....++|.++++. |....+..
T Consensus 111 ~~~~~~~~~~~~-------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~g~~ 164 (476)
T PLN00028 111 TAPAVFCMSLVS-------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTANGIA 164 (476)
T ss_pred HHHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHHHHH
Confidence 888776655542 345667778888988876543 4556788887543 56666666
Q ss_pred HHHHHHHHHHHHhhhhhhh----h-----ccchhHHHHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVF----I-----DQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~----~-----~~g~~~~f~i~~~~~~~~~~i 212 (346)
+...++|+.+++.+.+.+. + ..||++.|.+.+++.++..++
T Consensus 165 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~ 214 (476)
T PLN00028 165 AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL 214 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH
Confidence 6666777777766554442 2 258999999887766544443
No 63
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.39 E-value=1.8e-11 Score=122.05 Aligned_cols=176 Identities=15% Similarity=0.105 Sum_probs=122.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHH-HH-----HHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGA-SN-----TLTNFFGSTFLLCLVGGFISDTYLSRFATCLV 87 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a-~~-----~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~ 87 (346)
++......+..++|.+.+.. ......++.++++.+..+. +. +.++......++.+++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 45566666777888877754 4455567777775433221 11 13445566778999999999996 99999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
+.++..++.++..++ |+... ..-.....+++.+++.|+|.|+..++..++.+|.+|++. |+..
T Consensus 93 ~~~l~~i~~~~~a~~---~~~~~--------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~ 155 (490)
T PRK10642 93 TIVIMSISTFCIGLI---PSYAT--------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFM 155 (490)
T ss_pred HHHHHHHHHHHHHhc---ccHHH--------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHH
Confidence 999999998887765 22100 000011347889999999999999999999999998654 4556
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHH
Q 019064 168 FNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI 208 (346)
Q Consensus 168 f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~ 208 (346)
..+...+.++|.+++..+...+. .++|||+.|.+.++..++
T Consensus 156 ~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 156 GSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 66666677777777765544332 258999999986654443
No 64
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.38 E-value=1.2e-11 Score=122.26 Aligned_cols=149 Identities=11% Similarity=0.089 Sum_probs=116.1
Q ss_pred HHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019064 40 LYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119 (346)
Q Consensus 40 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~ 119 (346)
..+.+++|.+..+++.+.+.+.....++.+++|+++||+ |||++++.+.++..++.+++..+.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 345578999999999999999888889999999999996 999999999888888877665542
Q ss_pred CchhHHHHHH-HHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHH
Q 019064 120 KGAIAAYFYG-SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLG 198 (346)
Q Consensus 120 ~~~~~~~~~~-~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~ 198 (346)
+.+.+++ .+.+.|++.|...+...+...|.++ ++ |....++.+.+.++|..+++.+.+++.+.+||+++
T Consensus 106 ---~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~ 175 (455)
T TIGR00892 106 ---NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS 175 (455)
T ss_pred ---hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence 2334443 3467788888765555667777774 21 57778888889999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 019064 199 FLISSVATLIGLIALAI 215 (346)
Q Consensus 199 f~i~~~~~~~~~~i~~~ 215 (346)
|.+.+++.+++.+..++
T Consensus 176 f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 176 FLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988776655544433
No 65
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.36 E-value=2.1e-11 Score=120.69 Aligned_cols=176 Identities=14% Similarity=0.080 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+.+|.+.+..++....++++..+++.|+++.+|++..+++.....+.....++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577788888888888999999999999999999999999998888889999999999999996 988877665444443
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..++.+.. . .+....++.+++.|++..+..........|.+|++. ++...+.....
T Consensus 337 ~~~~~~~~~--~---------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~ 393 (467)
T PRK09556 337 IFTLGVYQH--A---------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHh--c---------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHH
Confidence 332222211 0 123334455555665443333333355668887543 56677777777
Q ss_pred HHH-HHHHHHhhhhhhhh------------ccchhHHHHHHHHHHHHHHHHHH
Q 019064 175 TTL-AAMIGVTAIVYVFI------------DQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 175 ~ni-G~~i~~~~~~~i~~------------~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.++ |..+++.+.+++.+ ..||..+|.+..++.+++.+..+
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 886 77889999999988 57899999888777777665544
No 66
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.2e-11 Score=117.51 Aligned_cols=177 Identities=17% Similarity=0.157 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHH-HHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATCL-VFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~l-GR~~~i~-~~~~l~ 92 (346)
|.+|+++++.++-.+.-||+..+.|+|+.+..|++..+++...+.|......++++.||+||+++ |||..+. +++++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999998 7776554 444444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.+..+.+..+ | ..+..+..+.++++|+-.-|..-.+.....|..|.+..+ +.-...-
T Consensus 332 ~~~~~~~w~~---~--------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaG------tA~Gf~G 388 (448)
T COG2271 332 TASLVLYWLA---P--------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAG------TATGFVG 388 (448)
T ss_pred HHHHHHHHcC---C--------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhcc------chhchhh
Confidence 5555555543 2 225677777788888887777766666666777654433 2222223
Q ss_pred HHHHH-HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 173 FATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 173 ~~~ni-G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
++..+ |+.++....+++.|.+||..+|.+..+..+++.+.++
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 34566 8889989999999989999999876666555555443
No 67
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.35 E-value=2.1e-11 Score=120.51 Aligned_cols=152 Identities=14% Similarity=0.141 Sum_probs=115.6
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhcc-CCCCCCCCCCCCCCCchhH
Q 019064 46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYS-KSLHPPDCGKSSCLKGAIA 124 (346)
Q Consensus 46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~-p~~~~~~~~~~~~~~~~~~ 124 (346)
+|.+..+.+++.+.+.....++++++|+++||+ |||++++++.+++.++.++..+.... ..... .+....
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--------~~~~~~ 120 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--------DNTGYV 120 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccc--------cchhHH
Confidence 488899999999999999999999999999996 99999999999988887666543210 00000 011235
Q ss_pred HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--------hhccchh
Q 019064 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWW 196 (346)
Q Consensus 125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i--------~~~~g~~ 196 (346)
..+++++++.|++.|+..+...++++|.++++. |+..++.+..+..+|.++++.+...+ .+..||+
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 194 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR 194 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence 677899999999999999999999999999543 56667777777888888876654433 2457999
Q ss_pred HHHHHHHHHHHHHHHH
Q 019064 197 LGFLISSVATLIGLIA 212 (346)
Q Consensus 197 ~~f~i~~~~~~~~~~i 212 (346)
+.|.+.++..++..+.
T Consensus 195 ~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 195 YMFASEAIPALLFLML 210 (479)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998876665554443
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.35 E-value=6.9e-11 Score=114.31 Aligned_cols=174 Identities=17% Similarity=0.089 Sum_probs=120.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
++..+..+...++-...++....+++.|+++++|++..+++.+.....+...++.+++|+++||+ |||+.+..+.....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~ 293 (393)
T PRK15011 215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGV 293 (393)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 34444444444444455656667889999999999999988888777777778889999999996 99998877665544
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
+....+... + +.+.+.+.+.+.+++.|...+...+...|.++++ ++...+++..
T Consensus 294 ~~~~~~~~~---~----------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~~~~~ 347 (393)
T PRK15011 294 CFYAGMLMA---H----------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATTLYTN 347 (393)
T ss_pred HHHHHHHHH---h----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHHHHHH
Confidence 443222211 1 2333444555555555555555556666777642 3556666667
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++|..+++.+.+++.+..||+..|.+..++.++++++.+
T Consensus 348 ~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 348 TSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999989999999887777766666554
No 69
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=4.9e-11 Score=117.57 Aligned_cols=169 Identities=9% Similarity=0.028 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHh---HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 18 TFVFVLSALENMGFIAN---GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv---~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.++...++....+|.. .....+|+.++ |++..+.+.+.+.+.....++.+++|+++||+ |||++++++.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHH
Confidence 34444444444444433 23445577777 99999999999999999999999999999996 999999999998888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++.+... . ..+.+.+++.+.+.+++.|...+.......|.+++++ |....++++.+
T Consensus 106 ~~~~~~~~~~---~------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 164 (452)
T PRK11273 106 VMLFMGFVPW---A------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA 164 (452)
T ss_pred HHHHHHhhhc---c------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHH
Confidence 8776665421 0 1145667788889999999888888888889887433 56777777888
Q ss_pred HHHHHH-HHHhhhhhhhhccchhHHHHHHHHHHHHH
Q 019064 175 TTLAAM-IGVTAIVYVFIDQGWWLGFLISSVATLIG 209 (346)
Q Consensus 175 ~niG~~-i~~~~~~~i~~~~g~~~~f~i~~~~~~~~ 209 (346)
.++|+. +++.....+....||++.|.+.++..++.
T Consensus 165 ~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~ 200 (452)
T PRK11273 165 HNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILV 200 (452)
T ss_pred HHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 888864 45544333333459999999877655543
No 70
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.34 E-value=6.7e-12 Score=124.26 Aligned_cols=150 Identities=8% Similarity=-0.095 Sum_probs=120.0
Q ss_pred HHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 019064 39 VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC 118 (346)
Q Consensus 39 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~ 118 (346)
...+.+++|++..+.+++.+.+.....++.+++|+++||+ |||+++.++.++..++..++..... ..
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--~~---------- 118 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG--SG---------- 118 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--cc----------
Confidence 4567789999999999999999999999999999999996 9999999888888777666554310 00
Q ss_pred CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc---ch
Q 019064 119 LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---GW 195 (346)
Q Consensus 119 ~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~---g~ 195 (346)
..+.+.+++.+.+.|++.+...|...++.+|.+++++ |...++++..+.++|.++++.+..++.+.. +|
T Consensus 119 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~ 190 (467)
T PRK09556 119 --SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV 190 (467)
T ss_pred --cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence 2257788889999999999999999999999999654 566777777788999999988877665543 58
Q ss_pred hHHHHHHHHHHHHH
Q 019064 196 WLGFLISSVATLIG 209 (346)
Q Consensus 196 ~~~f~i~~~~~~~~ 209 (346)
+..|.++++..++.
T Consensus 191 ~~~f~~~g~~~~~~ 204 (467)
T PRK09556 191 IGMFIFPSIIALII 204 (467)
T ss_pred hhHHHHHHHHHHHH
Confidence 88888766655443
No 71
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.33 E-value=3.2e-11 Score=118.41 Aligned_cols=152 Identities=10% Similarity=0.054 Sum_probs=119.5
Q ss_pred HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064 38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS 117 (346)
Q Consensus 38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~ 117 (346)
...++++ +|.+..+.+++.+.+.....++.+++|+++||+ |||+.+.++.++..++.+++... |..
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~~~--------- 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFV---PWA--------- 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcc---ccc---------
Confidence 3456665 599999999999999999999999999999996 99999999888888877665443 211
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-hhhccchh
Q 019064 118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY-VFIDQGWW 196 (346)
Q Consensus 118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~-i~~~~g~~ 196 (346)
..+...+++.+++.+++.|...+.......|.+++++ |+..+++++...++|+.+++.+.+. +..+.+|+
T Consensus 115 ---~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~ 185 (438)
T TIGR00712 115 ---TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH 185 (438)
T ss_pred ---cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence 1135566777888999999988888899999998654 5778888888899999888877665 44457999
Q ss_pred HHHHHHHHHHHHHHHH
Q 019064 197 LGFLISSVATLIGLIA 212 (346)
Q Consensus 197 ~~f~i~~~~~~~~~~i 212 (346)
..|.+.++..++..++
T Consensus 186 ~~f~~~~~~~~i~~~~ 201 (438)
T TIGR00712 186 AALYFPAICAIIVALF 201 (438)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999877766554433
No 72
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.33 E-value=8.8e-11 Score=117.04 Aligned_cols=176 Identities=14% Similarity=0.140 Sum_probs=119.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
++.....+...++..+.||++..+++.|+++.+|++..++............++.+++|+++||+ |||+++.++.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34444444455667789999999999999988999988877777777778888899999999996 99999888776544
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.+.+.... . ..+...+++++++.+++.++..+...++..+.+|++. |.+..++.|.
T Consensus 328 ~~~~~~~~~~--~--------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~~ 385 (490)
T PRK10642 328 VLAIPAFILI--N--------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAFN 385 (490)
T ss_pred HHHHHHHHHH--h--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHHH
Confidence 4332222211 0 0124456667777777766666667777788888654 5666776555
Q ss_pred HHHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i 212 (346)
..++++.+++.+.+++.+.. +|+..+.+..+..+++++.
T Consensus 386 ~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 386 ISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 56666777888888887654 3565554444333333333
No 73
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.33 E-value=7.3e-11 Score=113.97 Aligned_cols=173 Identities=20% Similarity=0.113 Sum_probs=128.8
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhh
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQA 103 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~ 103 (346)
..+..+++.++..+++.|+.+ .|.+ +++.....+.....++.++.|+++||+ ||+|.+.++..+..++.+++....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 344566777777888888864 4653 345555667777788889999999996 999998888877777766555421
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 019064 104 YSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 183 (346)
Q Consensus 104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~ 183 (346)
+.+.+++..++.++|.+...+.......|.++++ .+++.+++++...++|..+++
T Consensus 301 -------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~~ 355 (399)
T PRK05122 301 -------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLGITG 355 (399)
T ss_pred -------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 2345566778899999888888777777777632 267888888888999999899
Q ss_pred hhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCC
Q 019064 184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP 225 (346)
Q Consensus 184 ~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p 225 (346)
.+.+++.+..||+..|.+.+++.++++++....+++.+++.|
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T PRK05122 356 PLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVP 397 (399)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence 899999998999999998888777777666655555555444
No 74
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.32 E-value=9.1e-11 Score=109.72 Aligned_cols=174 Identities=21% Similarity=0.209 Sum_probs=148.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-HHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-~i~~~~~l~~ 93 (346)
|..+.+....++....+......++.|+.+.+|.+..+.+...........++.++.|+++||+ ||++ .+.++..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4566777778888888889999999999988899999999999999999999999999999996 9999 8988888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.+++.... +.+..++...+.+++.+...+...++..|..++++ +++.++.+..
T Consensus 254 i~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 308 (352)
T cd06174 254 LGLLLLALAP-------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNT 308 (352)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHH
Confidence 8877666532 24567788889999999999999999999998533 6788888899
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++|..+++.+.+++.++.+|+..|.+.++..+++.++..
T Consensus 309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999889999999988887776666543
No 75
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=5.4e-11 Score=112.67 Aligned_cols=171 Identities=13% Similarity=0.079 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+..+.+....++..+.+.......+.|. +++|.+..+++.+...+.....++.++.|+++||+ ||++.+.++..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3445555555666666666666677775 46888888888888888989999999999999996 999999988888888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++... +. .....++....+.+++.|...+..+++..|.+++++ +.+.+++++..
T Consensus 283 ~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~ 339 (377)
T TIGR00890 283 GMAAMLFI---PM--------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTA 339 (377)
T ss_pred HHHHHHHc---cc--------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHH
Confidence 76665443 11 112334455667788888888888888899988543 57788888889
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~ 210 (346)
.++|..+++.+.+++.++.||+..|.+.+++.+++.
T Consensus 340 ~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 340 KAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999988777665544
No 76
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=1.1e-10 Score=116.64 Aligned_cols=179 Identities=12% Similarity=0.064 Sum_probs=127.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHccc----ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKN----EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~----~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~ 88 (346)
+.+.+.++.+..+.+.+....+....+..-.+ +.+.+..+.+.+.+.+..+..++.++.|+++||+ |||+++.++
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~ 92 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHH
Confidence 34555556666666666554444433332211 2345566777888889999999999999999996 999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (346)
Q Consensus 89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f 168 (346)
++++.++.++..++. ... +..+...+++++++.|+|.|+..+....+.+|.+|.+. |+...
T Consensus 93 ~~~~~v~~~~~~~~~---~~~----------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~ 153 (502)
T TIGR00887 93 LIIMIIATVASGLSP---GSS----------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMM 153 (502)
T ss_pred HHHHHHHHHHHHHcc---Ccc----------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHH
Confidence 999999877666542 110 01235678999999999999999999999999999654 67777
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhh-----------------------ccchhHHHHHHHHHHHHHHH
Q 019064 169 NFYLFATTLAAMIGVTAIVYVFI-----------------------DQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 169 ~~~y~~~niG~~i~~~~~~~i~~-----------------------~~g~~~~f~i~~~~~~~~~~ 211 (346)
++.+...++|.++++.+...+.. +.+||+.|.+.++..++..+
T Consensus 154 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 154 AAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 88888888888888776554321 24799999876665544433
No 77
>PRK09952 shikimate transporter; Provisional
Probab=99.31 E-value=9.9e-11 Score=115.04 Aligned_cols=177 Identities=18% Similarity=0.179 Sum_probs=118.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHccccc--CCchhHHHHHHH-----HHHHHHHHHHHHHHHHhhhcccchhHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEM--HFDIAGASNTLT-----NFFGSTFLLCLVGGFISDTYLSRFATC 85 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l--g~s~~~a~~~~~-----~~~~~~~~~~llgG~laD~~lGR~~~i 85 (346)
++|......+..++|-+.+.......+.++.+++ +.++.. +.+.. +......++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3455666666777777766554444444555444 555553 33321 11223446667789999996 999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (346)
Q Consensus 86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~ 165 (346)
.++.+++.++.++..++ |+... ..-.....+++.+++.|+|.|+..+....+..|.+|++. |+
T Consensus 98 ~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg 160 (438)
T PRK09952 98 MLTVWMMGIATALIGLL---PSFST--------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KA 160 (438)
T ss_pred HHHHHHHHHHHHHHhcC---CcHHH--------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------Cc
Confidence 99999999988877764 22110 000112357788999999999999999999999998654 45
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHH
Q 019064 166 SYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI 208 (346)
Q Consensus 166 ~~f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~ 208 (346)
...+....+..+|.+++..+..++. ..+|||..|.+.++..++
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 5666667777888887766655543 257999999987765443
No 78
>PRK15075 citrate-proton symporter; Provisional
Probab=99.30 E-value=1.6e-10 Score=113.36 Aligned_cols=175 Identities=16% Similarity=0.106 Sum_probs=118.0
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHH-HHHHHH-HHH----HHHHHHHHHhhhcccchhH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNT-LTNFFG-STF----LLCLVGGFISDTYLSRFAT 84 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~-~~~~~~-~~~----~~~llgG~laD~~lGR~~~ 84 (346)
..+++.....++..+++.+....+... ...+.++++.+..+.+.. .+.... ..+ ++.++.|+++||+ ||||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~ 88 (434)
T PRK15075 11 ESKARAILRVTSGNFLEMFDFFLFGFY-ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKG 88 (434)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHH
Confidence 344556666666667766666555444 446777888877665433 332222 222 4678899999996 99999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064 85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL 164 (346)
Q Consensus 85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~ 164 (346)
++.+.++..++.++..++. +... ........+++++++.|++.|+..++...+.+|.+|++. |
T Consensus 89 l~~~~~~~~~~~~l~~~~~---~~~~--------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 151 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVP---GYAT--------IGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K 151 (434)
T ss_pred HHHHHHHHHHHHHHHHhCC---cHHH--------HHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c
Confidence 9999999999888777642 1100 000001246788999999999999999999999998654 5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhh--------hhccchhHHHHHHHH
Q 019064 165 ASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWWLGFLISSV 204 (346)
Q Consensus 165 ~~~f~~~y~~~niG~~i~~~~~~~i--------~~~~g~~~~f~i~~~ 204 (346)
....+++....++|..+++.++..+ .+.+||++.|.+.++
T Consensus 152 g~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 152 GFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 6666666666666666665555443 346899999987543
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.29 E-value=1.3e-10 Score=126.94 Aligned_cols=156 Identities=12% Similarity=0.085 Sum_probs=120.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+.+...+...++.++...+....+..++...++.+. ...+++.+++.....++.+++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3455555566666666666665666666655555543 3357778888889999999999999996 999999998887
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++.++..+... ..+.+.+++.+++.|++.+...+...++++|.+++++ ++..++++
T Consensus 87 ~~~~~~~~~~~~~----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 144 (1146)
T PRK08633 87 EVGLTLLIVLAYY----------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLL 144 (1146)
T ss_pred HHHHHHHHHHHHH----------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHH
Confidence 7776655554421 1146788899999999999999999999999998654 67888999
Q ss_pred HHHHHHHHHHHHhhhhhhhhc
Q 019064 172 LFATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~ 192 (346)
..+.++|.++|+.+++++.+.
T Consensus 145 ~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 145 EAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888765
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.29 E-value=2e-10 Score=125.55 Aligned_cols=165 Identities=11% Similarity=0.107 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhH-HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH--HHHHHH
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAG-ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL--EVLSLV 97 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~-a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l--~~~G~~ 97 (346)
++..+.+++....+....+..+++..+.+... .+.+..++.....++.+++|+++||+ |||+++.....+ ...+..
T Consensus 21 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~ 99 (1140)
T PRK06814 21 FFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALA 99 (1140)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHH
Confidence 34444445544444333333344444443333 55666778888899999999999997 999986442222 222222
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++.... .+.+.+++.+++.|++.+...|...+++.|.+++++ +....++...+.++
T Consensus 100 ~~~~~~------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~i 155 (1140)
T PRK06814 100 IYGFHL------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFI 155 (1140)
T ss_pred HHHHHH------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHH
Confidence 222111 146789999999999999999999999999998654 67888999999999
Q ss_pred HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (346)
Q Consensus 178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~ 210 (346)
|.++|+.+++++....||+..|.+.++..++++
T Consensus 156 g~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~ 188 (1140)
T PRK06814 156 AILLGTIIGGLATISGNFVILVALLMGIAVLGW 188 (1140)
T ss_pred HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 999999999999998999988844444333333
No 81
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=1.7e-10 Score=109.80 Aligned_cols=171 Identities=13% Similarity=0.040 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+.+....++....+......++.|+++++|.+..+++.+.....+....+.+++|+++||+ |||+++.++.++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 33334444444444555566788899889999999888887776666777788999999996 99999887766555444
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
.++.... +.+.+++...+.+++.|...+...++..|..+++ +++.++.++...+
T Consensus 280 ~~~~~~~-------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 280 TGLAADN-------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGR 333 (375)
T ss_pred HHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHH
Confidence 3333221 2344555566677777777777777777777532 3477788888899
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+|..+++.+.+++.+..||+..|.+.+++.+++.++..
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999989999999988877776666544
No 82
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.28 E-value=4.8e-11 Score=113.47 Aligned_cols=157 Identities=12% Similarity=0.089 Sum_probs=121.4
Q ss_pred HHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhcc
Q 019064 26 LENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYS 105 (346)
Q Consensus 26 ~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~ 105 (346)
+|...++.....+.+.+.+++|++..+++.+.+.+.....++.++.|+++||+ ||||++.++.++..++.++. ..
T Consensus 10 ~~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~--- 84 (355)
T TIGR00896 10 LNLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA--- 84 (355)
T ss_pred hcccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh---
Confidence 34444444445555677779999999999999999999999999999999996 99999999988877776554 21
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064 106 KSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185 (346)
Q Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~ 185 (346)
+ +.+.+++.+++.++|.+...+.......|.+++ + +.+.++.++...++|..+++.+
T Consensus 85 ~----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~i~~~~ 141 (355)
T TIGR00896 85 P----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGLMTGLYSMALMGGAALAAAA 141 (355)
T ss_pred c----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHH
Confidence 1 345677889999999998888888888777753 1 4667788888899999999988
Q ss_pred hhhhhhcc--chhHHHHHHHHHHHHHH
Q 019064 186 IVYVFIDQ--GWWLGFLISSVATLIGL 210 (346)
Q Consensus 186 ~~~i~~~~--g~~~~f~i~~~~~~~~~ 210 (346)
.+++.++. +|+..|.+.++..++..
T Consensus 142 ~~~l~~~~~~~w~~~f~~~~~~~~~~~ 168 (355)
T TIGR00896 142 TVPLAQHSGGHWQQALAWWALPALLAL 168 (355)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence 88887654 38888877655444433
No 83
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.28 E-value=3.1e-10 Score=109.90 Aligned_cols=177 Identities=10% Similarity=-0.043 Sum_probs=134.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.+..|.+....++..++++++..+++.|+.+ +|.+..+++.....+.+...++.++.|+++||+ ||++.+.++..+..
T Consensus 204 ~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~ 281 (393)
T PRK09705 204 TPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQL 281 (393)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHH
Confidence 3456666666777788999999999999986 899999999999999999999999999999995 99999988887777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++..++... |. ..... ...+.++|.++..+.......|++++++ .+++.+++.+.
T Consensus 282 ~~~~~~~~~---~~---------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~ 336 (393)
T PRK09705 282 VGFCGFIWL---PL---------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQG 336 (393)
T ss_pred HHHHHHHHc---cc---------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHH
Confidence 776554322 21 11111 1235678888888877777778875321 25778888888
Q ss_pred HHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064 174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
..++++.+++.+.+++.+..| |...|.+.+++.++..+..+...
T Consensus 337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK09705 337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999876 78888887776666655544433
No 84
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.28 E-value=2.8e-10 Score=112.42 Aligned_cols=198 Identities=15% Similarity=0.087 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchhHHHHH-HHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCLVF-GTL 91 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~~i~~~-~~l 91 (346)
....+....+.-.++|-...+++..|+ +.+|.+...++.+..+......+..|+.|+++|| .+||||.++++ ...
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 445555556666777766667777776 5799999999999999999999999999999996 45999998775 555
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++++++..+..+.......-+ .-......+.+.+++.+.-++.....+...++++|..++++++ .+..+.|.
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~--~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~~~ 157 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLD--KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANAYF 157 (477)
T ss_pred HHHHHHHHHhCchhhhhcccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHHHH
Confidence 55565555543211000000000 0000112245566666777788888888999999999976421 34678888
Q ss_pred HHHHHHHHHHHHhhhhhh--hhc-------------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064 172 LFATTLAAMIGVTAIVYV--FID-------------QGWWLGFLISSVATLIGLIALAIGKPFY 220 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i--~~~-------------~g~~~~f~i~~~~~~~~~~i~~~~~~~~ 220 (346)
.+..++|+++++.++++. .+. .+.+..|.+.+++++++.++.++..+++
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 899999999999887764 111 1568889998888888777776655543
No 85
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=3.1e-10 Score=111.49 Aligned_cols=179 Identities=11% Similarity=-0.009 Sum_probs=123.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+....++...++..+++|++..+++.|+++.+|++......+.........++.+++|+++||+ |||+++..+.++..+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~ 328 (438)
T PRK09952 250 GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTL 328 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3344445567778889999999999999999999887655555556666777888999999995 999998877766555
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF- 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~- 173 (346)
+.+.+.... .. ......+++...+.+++.+...+...++.+|.+|.+. |.+..++.|.
T Consensus 329 ~~~~~~~~~--~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~~ 387 (438)
T PRK09952 329 SAFPFFMAL--EA-------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQV 387 (438)
T ss_pred HHHHHHHHH--Hc-------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHHH
Confidence 443333221 00 0123334445566678888888888899999998643 4556666444
Q ss_pred HHHHHHHHHHhhhhhhhhcc--chhHHHHHHHHHHHHHHHHHHh
Q 019064 174 ATTLAAMIGVTAIVYVFIDQ--GWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~--g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+.
T Consensus 388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 44588889999999987743 4777777666666666555443
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.27 E-value=1.9e-10 Score=112.17 Aligned_cols=175 Identities=16% Similarity=0.140 Sum_probs=125.3
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchh-HHHHHHHHHHHHHHHH
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFA-TCLVFGTLEVLSLVML 99 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~-~i~~~~~l~~~G~~ll 99 (346)
++...+.+..+..+++.|+++.+|++..+++.+..+......+..|+.|+++||. +|||| .++++..+..++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4556667777778899999999999999999999999999999999999999983 58865 5666777777776665
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~ 179 (346)
... |+.. .......+++...+.+++.+.......++.+|..++ ++| |++...+.....++|+
T Consensus 88 ~~~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~---R~~~~~~~~~~~~~g~ 149 (437)
T TIGR00792 88 FTT---PDFS----------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLD--PRE---RESLSTFRRFGATLGG 149 (437)
T ss_pred HhC---CCCC----------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCC--HHH---HHHHHHHHHHHHHHHH
Confidence 542 3221 012345566666777888888888888888887654 333 5667777777788887
Q ss_pred HHHHhhhhhhh-------hccchhHHHHHHHHHHHHHHHHHHhc
Q 019064 180 MIGVTAIVYVF-------IDQGWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 180 ~i~~~~~~~i~-------~~~g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
+++..+.+.+. +..+|+..+.+.+++.++..++.+..
T Consensus 150 ~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 150 LLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 77665544332 24689988887777665555544433
No 87
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=5e-11 Score=113.30 Aligned_cols=177 Identities=10% Similarity=0.072 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHH---HHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISM---VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l---~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
--+-++...++...+||-+.-|. .+++.++.++|..|.+.+.+.+.+++.++-.+.|.++||. +.|+.+.+++++.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLils 104 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHH
Confidence 34556677788888999888664 5788888999999999999999999999999999999996 9999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.+-.+++..+. +.+.+.+-..+.|..+|.-.|.....++..|+.++ |++..+.+.
T Consensus 105 ai~nil~Gfs~-------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~siWn 159 (448)
T COG2271 105 AIVNILFGFSP-------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSIWN 159 (448)
T ss_pred HHHHHHHhhhh-------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEEeh
Confidence 88888888753 46778888889999999999999999999999654 788888899
Q ss_pred HHHHHHHHHHHhhh--hhhhhccchhHHHHHHHHHH-HHHHHHHHhcCc
Q 019064 173 FATTLAAMIGVTAI--VYVFIDQGWWLGFLISSVAT-LIGLIALAIGKP 218 (346)
Q Consensus 173 ~~~niG~~i~~~~~--~~i~~~~g~~~~f~i~~~~~-~~~~~i~~~~~~ 218 (346)
.+.|+|+++.+.++ +++..+.+|+.+|.+|+++. ++++..+...+.
T Consensus 160 ~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 160 TSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred hhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999998 89998899999999998754 555555555543
No 88
>TIGR00898 2A0119 cation transport protein.
Probab=99.25 E-value=2.1e-10 Score=114.35 Aligned_cols=146 Identities=17% Similarity=0.120 Sum_probs=117.4
Q ss_pred HHcccccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064 40 LYFKNEMHFD---IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (346)
Q Consensus 40 ~yl~~~lg~s---~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~ 116 (346)
.-+.+++|++ ..+.+.+.+.+.....++.++.|+++||+ |||++++++.++..++.++..++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3456688998 88899999999999999999999999995 999999999988888876665432
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchh
Q 019064 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW 196 (346)
Q Consensus 117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~ 196 (346)
+.+.+++.+++.|++.++..+...++..|.++++. |......+..+..+|.++++.++.++.+ |+
T Consensus 179 ------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr 243 (505)
T TIGR00898 179 ------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WR 243 (505)
T ss_pred ------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HH
Confidence 46778899999999999999999999999998543 4555666667778888888877665543 99
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019064 197 LGFLISSVATLIGLIALA 214 (346)
Q Consensus 197 ~~f~i~~~~~~~~~~i~~ 214 (346)
+.|.+.++..++..+..+
T Consensus 244 ~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 244 WLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999887766655544443
No 89
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.25 E-value=2.1e-10 Score=113.10 Aligned_cols=176 Identities=13% Similarity=0.099 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHH-HHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATC-LVFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~l-GR~~~i-~~~~~l~ 92 (346)
+.+|...+..++....++++..++|.|++++.|++..+++.....+.....++.+++|+++||+. ||++.. ...+.+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 45677777788888888999999999999989999888888888888888889999999999952 444432 2233333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++.+++.+. +. .+.....+.+.+++.+..+.......+..|.+|++. +++.+++.+
T Consensus 333 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 389 (452)
T PRK11273 333 TIATIVYWLN---PA--------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 389 (452)
T ss_pred HHHHHHHHHh---cc--------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHHH
Confidence 3443333221 11 122233334444444333322333345667777543 577788888
Q ss_pred HHHHHHHHH-HHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMI-GVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 173 ~~~niG~~i-~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
...++|+.+ ++.+.+++.++.||+..|.+.++..+++++..
T Consensus 390 ~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 390 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL 431 (452)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 878888654 78999999999999999988777665554433
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.24 E-value=3.7e-10 Score=110.10 Aligned_cols=174 Identities=9% Similarity=0.036 Sum_probs=134.4
Q ss_pred CCchHHHH-HHHHHHHHHHHHHHhHHHHHHHcccccCCchhH-HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 12 GGFRACTF-VFVLSALENMGFIANGISMVLYFKNEMHFDIAG-ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 12 ~~~~~~~~-i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~-a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+.|+...+ +|+-.|+-.+= ...+.+..|+.+++|++..+ .+.+..+|...+.++.+++|+++||+ |-|+++.++.
T Consensus 23 ~~W~~~~~~lC~fGF~~e~R--~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~ 99 (511)
T TIGR00806 23 KSWRVLVLYLCFYGFMAQFR--PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQA 99 (511)
T ss_pred cchhHHHHHHHHHHHHHHhh--chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHH
Confidence 34554443 55544443221 12345667999999999999 99999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
+...+..+++.++. +...+.+.+++.|+++|+.. ....+++..+|+ +| |++..+
T Consensus 100 l~Wsl~t~L~~fa~-------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~---kE---R~rats 153 (511)
T TIGR00806 100 LSFVCVWLLLLLGT-------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP---SR---YQRAAA 153 (511)
T ss_pred HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH---HH---HHHHHH
Confidence 99988887777653 46788999999999999999 999999999994 33 677778
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHH---HHHHHHHHHHHHHHHh
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGF---LISSVATLIGLIALAI 215 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f---~i~~~~~~~~~~i~~~ 215 (346)
.+..+.++|.++++.+++++. .+||+.-+ .|+.....+++++-++
T Consensus 154 i~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 154 YSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 888899999999999998854 57887544 3555555555554433
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.23 E-value=3.3e-10 Score=107.70 Aligned_cols=157 Identities=12% Similarity=0.098 Sum_probs=111.5
Q ss_pred hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchhHH-HHHHHHHHHHHHHHHhhhccCCC
Q 019064 34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFATC-LVFGTLEVLSLVMLTIQAYSKSL 108 (346)
Q Consensus 34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~~i-~~~~~l~~~G~~ll~l~~~~p~~ 108 (346)
+.......+.+++|++..+.+...... ..+...++.|.++||+ +||||.+ +.+.++..+.+..+... +.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~--~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~---~~- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVG--LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL---VP- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHH--HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC---Cc-
Confidence 334344444557899999998886542 2223478999999997 4999975 55565555554444432 21
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 019064 109 HPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY 188 (346)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~ 188 (346)
..+.+.+.....+.+++.+...+...++..|.+++++ |+...++...+.++|.++++.++.+
T Consensus 80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1244555555556778888888999999999997533 6777888888899999999999888
Q ss_pred hhhccc--------hhHHHHHHHHHHHHHHHHHH
Q 019064 189 VFIDQG--------WWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 189 i~~~~g--------~~~~f~i~~~~~~~~~~i~~ 214 (346)
+..+.| |+..|.+.++..+++.++.+
T Consensus 142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 887777 99999988877666555444
No 92
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.23 E-value=9.1e-10 Score=106.76 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchh-HHHHHHHHHHH
Q 019064 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFA-TCLVFGTLEVL 94 (346)
Q Consensus 20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~-~i~~~~~l~~~ 94 (346)
++...+.+.+.+.-....++.|+++ .|++..+.+.+...... ++..++.|+++||+ +|||| .+.++.++..+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 3455666677777777889999986 59999999988654443 68899999999996 27876 56666777766
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
++.++.+. +. ..+.+.+++..++.++..+...+...++..|.+++++ |.+...+...+
T Consensus 81 ~~~~l~~~---~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g 138 (402)
T PRK11902 81 SIAAMAFC---PP-------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLG 138 (402)
T ss_pred HHHHHHhc---Cc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHH
Confidence 66655443 11 1245556666566778888899999999999987543 56666777777
Q ss_pred HHHHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~ 213 (346)
.++|.++++.+..++.+. .||+..|.+.++..++..+..
T Consensus 139 ~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 139 YRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 888999988888888775 599999998777665554443
No 93
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.22 E-value=3.7e-10 Score=109.02 Aligned_cols=170 Identities=11% Similarity=0.009 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchh---HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
++...++..+...++...++.|+.+..+.... ..+.+.........++.++.|+++||+ ||++++..+..+..++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 302 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHH
Confidence 33334445555556667778888764433221 223444455566677888899999995 99999988887776665
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+.+.... +.+.+++..++.+++.+...+...+...+..+++. +++.+++++...+
T Consensus 303 ~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~ 357 (408)
T PRK09874 303 IPMSFVQ-------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRD 357 (408)
T ss_pred HHHHHhc-------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHH
Confidence 5443321 24556677778899999988888888877766443 5677888888899
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+|..+++.+.+++.++.||+..|.+.+++.+++.+....
T Consensus 358 ~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 358 IGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888877776665544
No 94
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=1.1e-09 Score=109.21 Aligned_cols=178 Identities=10% Similarity=0.129 Sum_probs=133.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchhH-HHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFAT-CLV 87 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~~-i~~ 87 (346)
.+|..+.++...+..-+.++.....++.|+++ .|.+..+.+.... .+..++..++.|.++||+ +||||. +.+
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~--~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL--VGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 45567777788888888888888889999875 5888888777522 333457889999999994 299886 556
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
+.+...++...+.... | ..+.+.+.+...+.+++.+...+...++..|.+++++ |.+.
T Consensus 87 ~~i~~~~~~~~~a~~~--~--------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~ 144 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--P--------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAG 144 (491)
T ss_pred HHHHHHHHHHHHHHcC--C--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHH
Confidence 6665656655554432 2 2256677778888899999999999999999998443 5667
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHh
Q 019064 168 FNFYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 168 f~~~y~~~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
.++...+.++|.++++.+..++.+ ..||+..|.+.++..++..+..+.
T Consensus 145 ~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 145 AAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 777778889999999988888888 479999999887766655544333
No 95
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=1.1e-09 Score=107.71 Aligned_cols=179 Identities=13% Similarity=-0.042 Sum_probs=125.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
|.+++..+. +.-.|.-..+.+.+..++.+ ++|++..|.+++.+++.....++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~-f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSC-LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 554444443 44455555555666667655 7999999999999999999999989999999996 99999999999988
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.+++.++. ++. ..+.+.+++.+++.|++ |+..+.....+.+.|++++ ++...+++..
T Consensus 112 i~~~~~~~a~--~~~------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g 170 (462)
T PRK15034 112 IPCVWLGIAV--QNP------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGG 170 (462)
T ss_pred HHHHHHHHHH--ccc------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHH
Confidence 8877766542 111 12577888999999998 7788889999999998543 4666666656
Q ss_pred HHHHHHHHHHhhhhhhh-----h-------------ccchhHHHHHHHHHHHHHHHHHHhc
Q 019064 174 ATTLAAMIGVTAIVYVF-----I-------------DQGWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~-----~-------------~~g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
..|+|..++..+.+.+. . ..+|+.++.+-.+..+++.++.++.
T Consensus 171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67777776655554322 2 2346666555555454554444443
No 96
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.20 E-value=7.5e-11 Score=111.08 Aligned_cols=166 Identities=12% Similarity=0.042 Sum_probs=140.3
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (346)
Q Consensus 45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~ 124 (346)
.++.++.+.+.+...+.....+..++.|.+.|| +|++-.+++|.++....++++++.. +.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~-------------------sy 159 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN-------------------SY 159 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc-------------------hh
Confidence 456678889999999999999999999999998 5999999999999999999998864 46
Q ss_pred HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHH
Q 019064 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV 204 (346)
Q Consensus 125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~ 204 (346)
+++++++.+.|+|.+....+-.++.||.|+++.+ |++.++...-.+.+|-++||..++.+.+..|+...|++.++
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence 7899999999999999999999999999998763 57777777778999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCccceec---CCCCCcchhHHH
Q 019064 205 ATLIGLIALAIGKPFYRIQ---QPGESPLVRVAQ 235 (346)
Q Consensus 205 ~~~~~~~i~~~~~~~~~~~---~p~gs~l~~i~~ 235 (346)
++++...+-++..+.++.+ .+++.|+.++.+
T Consensus 235 v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~ 268 (464)
T KOG3764|consen 235 VLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLM 268 (464)
T ss_pred HHHHHHHHHHheeCccccCccccccCccHHHHHh
Confidence 8877766655554444332 356666666554
No 97
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.20 E-value=3.9e-10 Score=108.23 Aligned_cols=160 Identities=14% Similarity=0.066 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
...++....+..+.+.++...++.|+.+++|++..+++.+.........++.++.|+++||+ ||++.+.++..+..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence 33444444555666667778899999989999999999999989999999999999999995 99999887776543322
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
..+... + .+.+.+.+++++.++..++..+...++..|.++++. +++.++..+...+
T Consensus 319 ~~~~~~---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~ 374 (405)
T TIGR00891 319 IPVFAI---G---------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGN 374 (405)
T ss_pred HHHHHh---C---------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHH
Confidence 221111 1 123445555566667777777788888889887543 5778888888999
Q ss_pred HHHHHHHhhhhhhhhccc-hhHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQG-WWLGFLI 201 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g-~~~~f~i 201 (346)
+|+.+++.+.+++.++.| |...+..
T Consensus 375 ~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 375 LGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHh
Confidence 999999999999999888 7766654
No 98
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.20 E-value=3.3e-10 Score=107.89 Aligned_cols=167 Identities=13% Similarity=0.082 Sum_probs=123.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+..+.+....++....++.+...++.|+++++|.+..+++...........++.+++|+++||+ |||+.+..+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3467777788888999999999999999888999999999888888889999999999999996 999987755554433
Q ss_pred HH-HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH-H
Q 019064 95 SL-VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY-L 172 (346)
Q Consensus 95 G~-~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~-y 172 (346)
.. .++.... + ..+.+.+++...+.+++.+...+...++..|.+|++. |.+.++.. .
T Consensus 298 ~~~~~~~~~~--~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~ 355 (394)
T TIGR00883 298 LAVPLLMALL--D--------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYN 355 (394)
T ss_pred HHHHHHHHHh--c--------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhH
Confidence 22 2222111 0 0134455666777888888888999999999998654 34444443 3
Q ss_pred HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSV 204 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~ 204 (346)
.+..+|..+++.+.+++.++.| |+..+...++
T Consensus 356 ~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 356 LAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 4556788899999999998888 7766554443
No 99
>PRK03545 putative arabinose transporter; Provisional
Probab=99.19 E-value=1.5e-09 Score=104.59 Aligned_cols=174 Identities=9% Similarity=-0.059 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+..+...++....+++....++.|+.+.+|++..+++.+...+.....++.++.|+++||+ ||++. ..+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHH
Confidence 34445555666667777777888899888999999999999889889999999999999996 88764 44444444443
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
.++.... .+.+.+++...+.+++.++..+...+.+.+..++ . +++.++++....+
T Consensus 285 ~~l~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~~~ 339 (390)
T PRK03545 285 LLLLPAA------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A------TDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHh------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c------HHHHHHHHHHHHH
Confidence 3322211 1345566667778888777777777777666542 1 4566777777789
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
+|..+|+.+.+++.++.|++..|.+.+++.++++++.....
T Consensus 340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999988887777777665443
No 100
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.19 E-value=5.3e-10 Score=111.11 Aligned_cols=150 Identities=18% Similarity=0.142 Sum_probs=109.6
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
++...++.|+++++|++..+++.+...+.....++.+++|+++||+ ||++++.++..+..++.+++....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4667899999889999999999999999999999999999999995 999998877666555543332211
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~ 192 (346)
....+...+.+++.+....+..+..+++..|.++++. +.+.+++++...++|+.+++.+.+++.+.
T Consensus 363 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 363 --------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred --------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 1122333333333333333445667777888887432 67788888888999999999999999999
Q ss_pred cchhHHHHHHHHHH
Q 019064 193 QGWWLGFLISSVAT 206 (346)
Q Consensus 193 ~g~~~~f~i~~~~~ 206 (346)
.||...+.+.+++.
T Consensus 429 ~g~~~~~~~~~~~~ 442 (496)
T PRK03893 429 LDLGTALASLSFSL 442 (496)
T ss_pred CChHHHHHHHHHHH
Confidence 99988775544433
No 101
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.19 E-value=8.1e-10 Score=108.37 Aligned_cols=177 Identities=17% Similarity=0.075 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--hhHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR--FATCLVFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR--~~~i~~~~~l~ 92 (346)
+.+|.+.+..++..+.++++..+++.|+++++|++..+++.....+.....++.+++|+++||+.+| ++......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 3456666667777778888889999999888999999999999999999999999999999996432 23222221111
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.+..+.+.+. +.. +.....+..++++++..+.........+|.++++. +....++.+
T Consensus 323 ~~~~~~~~~~---~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 379 (434)
T PRK11663 323 LLSVGSLWLM---PFA--------------SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG 379 (434)
T ss_pred HHHHHHHHHc---ccc--------------cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence 1222221111 210 11222222233333322222223344567665322 678888888
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
...++|..+++.+.+++.+..||...|.+.+++.+++.++.+
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999888777666655444
No 102
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.19 E-value=1e-09 Score=105.54 Aligned_cols=157 Identities=13% Similarity=0.112 Sum_probs=116.1
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (346)
Q Consensus 25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~ 104 (346)
+...+.+......++.|+++ .|.+..+++...........++.++.|+++||+ ||++.+.++..+..++..++. ..
T Consensus 210 ~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~- 285 (381)
T PRK03633 210 IISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ- 285 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh-
Confidence 33344455555678888875 699988888888888888899999999999996 999998888877777654432 10
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
......+.+.+++.++..|...+...|..++++ +......+....++|.++++.
T Consensus 286 --------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 286 --------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred --------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 112344556666666778888888888876432 344555556678999999999
Q ss_pred hhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 185 AIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 185 ~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
+.+++.+++||.+.|.+.+.+.+++.+
T Consensus 340 ~~G~l~~~~g~~~~f~~~~~~~l~~~~ 366 (381)
T PRK03633 340 FTAMLMQNYSDNLLFIMIASVSFIYLL 366 (381)
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence 999999999999999887766655443
No 103
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.19 E-value=1.1e-09 Score=106.02 Aligned_cols=166 Identities=13% Similarity=-0.054 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM 98 (346)
Q Consensus 19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l 98 (346)
.+....++.-..++.+..+++.|+.+ .|++..+++.+...+.....++.++.|+++||+ ||++.+.++.....++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 224 LLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence 33444455556777777888888875 799999999999999999999999999999995 9999888766655555444
Q ss_pred HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 019064 99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178 (346)
Q Consensus 99 l~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG 178 (346)
+... + +.+.+.+..++.+++.++..+...++..|.+++++ +++..++.+...++|
T Consensus 302 ~~~~---~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g 356 (406)
T PRK11551 302 LAAA---P----------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLG 356 (406)
T ss_pred HHhc---C----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHH
Confidence 3322 1 23344555666777777788888888999998654 677888888889999
Q ss_pred HHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHH
Q 019064 179 AMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLI 211 (346)
Q Consensus 179 ~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~ 211 (346)
..+++.+.+++.++. +|...+.+...+.+++.+
T Consensus 357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAAL 390 (406)
T ss_pred HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHH
Confidence 999999999988764 444455544444444433
No 104
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.18 E-value=6.7e-10 Score=115.20 Aligned_cols=129 Identities=16% Similarity=0.050 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019064 59 NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC 138 (346)
Q Consensus 59 ~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~ 138 (346)
+......++.+++|+++||+ |||+++.++.++..++.+++.+.. +...+++.+++.+++.
T Consensus 603 l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~-------------------s~~~ll~~~~l~g~~~ 662 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN-------------------SESAMIALLCLFGGLS 662 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHHHH
Confidence 34567788999999999995 999999998888888776665432 1233444555667777
Q ss_pred cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
++..+...++.+|.+|.+. |++.+++.+...++|+++++.+++++.+. +....|.+.+++++++.++.+
T Consensus 663 ~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 663 IAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 7788889999999998532 78899999999999999999998877663 456677777776666555444
No 105
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.6e-09 Score=102.68 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=114.2
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
.....|.+.+++.++++..+++++-.+|.+...+.++..|++.+|+ |+|+.++++..++.+|..++.-++.
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~-------- 100 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS-------- 100 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh--------
Confidence 3456688888999999999999999999999999999999999996 9999999999999999888875542
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~ 191 (346)
......|.+++++++.|.+..+....+++.+..+++... .-.|...-...+|++++|.+++++..
T Consensus 101 --------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~------~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 101 --------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAA------FRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred --------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHH------HHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 235788999999999999999999999999999875432 22344444568899999988877654
No 106
>PRK12382 putative transporter; Provisional
Probab=99.18 E-value=7e-10 Score=106.93 Aligned_cols=162 Identities=20% Similarity=0.253 Sum_probs=123.0
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (346)
Q Consensus 25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~ 104 (346)
++..+++.++....+.|+++ .|++. ++.....+.....++.++.|++.||+ ||+|.+.++..+..++.+++...
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-- 299 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA-- 299 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc--
Confidence 34456666677777888865 46653 44555566667778889999999995 99999998888888876655432
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
+ +.+..++...+.+++.+...+...+...|.++++. +.+.+++++...++|..+++.
T Consensus 300 -~----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 300 -P----------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred -c----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 1 23455667778888888888888788888876432 678888889899999999999
Q ss_pred hhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 185 AIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 185 ~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+++.++.||+..|.+.+++.+++.++.+.
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 357 LAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999888877777666553
No 107
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.18 E-value=1.7e-09 Score=102.93 Aligned_cols=130 Identities=17% Similarity=0.225 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccc
Q 019064 65 FLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGT 144 (346)
Q Consensus 65 ~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~ 144 (346)
.++.++.|+++||+ |||+++.++.++..++.+++.+....+.. .......+++++++.|+|.+...+.
T Consensus 49 ~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~r~l~G~~~~~~~~~ 116 (394)
T TIGR00883 49 PLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI-----------GIWAPILLLLARLIQGFSLGGEWGG 116 (394)
T ss_pred hhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-----------HHHHHHHHHHHHHHHHhhccccccc
Confidence 35788999999996 99999999999999888777664211100 0012245778899999999999999
Q ss_pred hhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHHHHHH
Q 019064 145 LPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 145 ~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~~~~i 212 (346)
..++.+|.+++++ |+....+...+..+|.++++.+...+. +.++|++.|.+.++..+++..+
T Consensus 117 ~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 117 AALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred cHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 9999999998654 567777778888889888887765543 3578999998877666555444
No 108
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.17 E-value=1.4e-09 Score=103.29 Aligned_cols=180 Identities=16% Similarity=0.058 Sum_probs=128.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH-HHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT-CLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~-i~~~~~l~~ 93 (346)
|..+.+++..++....++++..+++.|+++.+|.+..+++.+.........++.+++|+++||+ |||+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 5677788888889999999999999999999999999999999888889999999999999996 88751 222222222
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.++..+....... . ......+...+++.+..+..+...++.+|.+++++ ++..++++..
T Consensus 294 ~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 354 (399)
T TIGR00893 294 IAGLVLSLLMFATNY------------V-NIPYAALALVALGFFGLGAGAIGWALISDNAPGNI------AGLTGGLINS 354 (399)
T ss_pred HHHHHHHHHHHHhcc------------c-hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhH------HHHHHHHHHH
Confidence 221111111100100 0 11222333334444444478899999999998544 6788888888
Q ss_pred HHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++|..+++.+.+++.+..| |...|.+.++..+++.++.+
T Consensus 355 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 355 LGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999888 99898887776666655443
No 109
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.17 E-value=6.4e-10 Score=108.74 Aligned_cols=175 Identities=12% Similarity=0.018 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCch--------hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDI--------AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~--------~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+..++..++...++......++.|+++ .|.+. ...+...+...+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 345555566555555555677778764 45443 4557777777888888889999999996 9999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
++..++..++.... +. ....+.+++...+.+++.+...++...+++|.+++++ +.+.++
T Consensus 289 ~~~~v~~~l~~~~~--~~-------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g 347 (418)
T TIGR00889 289 VAWALRFGFFAYGD--PE-------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQG 347 (418)
T ss_pred HHHHHHHHHHHHcC--cc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHH
Confidence 98888766665431 10 1124556777888999988888998999999998433 678888
Q ss_pred HHH-HHHHHHHHHHHhhhhhhhhc------cchhHHHHHHHHHHHHHHHHHHh
Q 019064 170 FYL-FATTLAAMIGVTAIVYVFID------QGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 170 ~~y-~~~niG~~i~~~~~~~i~~~------~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+ ...++|.++++.+.+++.++ +||+..|.+.+++.+++.+++..
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~ 400 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMI 400 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 886 46789999999999999887 46999998877766555554443
No 110
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.17 E-value=1.1e-09 Score=106.56 Aligned_cols=159 Identities=11% Similarity=-0.063 Sum_probs=122.9
Q ss_pred HHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 019064 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP 110 (346)
Q Consensus 31 ~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~ 110 (346)
+.++...++.|+++.+|.+...++.+...+.....++.+++|+++|+. ++++.+..+..+..++.+++... +
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~---~---- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM---P---- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc---c----
Confidence 456677888999888999999999998888888999999999999984 77778887777777776555432 1
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064 111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (346)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~ 190 (346)
+.....+..++.+++.+...+...++..|..|++. +++.+++++...++|..+++.+.+++.
T Consensus 311 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 311 ------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 23455666777888887777777788888887432 677888888888999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHh
Q 019064 191 IDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 191 ~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+|+...+.+.+++.++..++...
T Consensus 373 ~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 373 AMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHhchhhHHHHHHHHHHHHHHHHHH
Confidence 9999888887766655544444433
No 111
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.15 E-value=2.2e-09 Score=103.41 Aligned_cols=164 Identities=9% Similarity=-0.073 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH-HHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL-EVL 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l-~~~ 94 (346)
..+.+.+..++...++-...+.++.|++ ++|++..+.+.+.+.+.....+.+++.|.++||+ ||++.......+ ..+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l 82 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAI 82 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 3344555566666666556677888885 5899999999999999999999999999999996 885433221111 111
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
..+.+... ..+.+.+++.+.+.+.+.+...|...++..| .. + +++..++.....
T Consensus 83 ~~~~~~~~------------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~----~---~~~~~~g~~~~~ 136 (382)
T TIGR00902 83 FAAAFSAG------------------AHNAWLLFIAIGLFALFFSAGMPIGDALANT-WQ----K---QFGLDYGKVRLI 136 (382)
T ss_pred HHHHHHHh------------------hhhHHHHHHHHHHHHHHHccchhHHHHHHHH-HH----H---HcCCCccHHHHH
Confidence 11111111 1246777788888888888888877776543 22 1 145567777888
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~ 207 (346)
.++|.++++.+++++.+++||+..|.+..+..+
T Consensus 137 ~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~ 169 (382)
T TIGR00902 137 GSAAFIIGSALFGGLIGMFDEQNILAILTAGLA 169 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 999999999999999999999999987655433
No 112
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.14 E-value=3.4e-09 Score=102.80 Aligned_cols=177 Identities=12% Similarity=0.049 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH-HHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV-FGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~-~~~l~~ 93 (346)
|..+...+..++...++++....++.|++ ++|++..+++.+.........++.++.|+++||+ ||++.+.. +.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34566667778888899999999999985 5899999998888888889999999999999995 98887642 222233
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++.+.+... |... ..+.+..++...+.+++.++..+ ..+...|..++ .++..+++++.
T Consensus 300 ~~~~~l~~~---~~~~-----------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-------~~g~~~g~~~~ 357 (402)
T TIGR00897 300 IFTLALYYI---PQHF-----------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-------HKGAAMSVLNL 357 (402)
T ss_pred HHHHHHHHH---HHcc-----------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-------hhHHHHHHHHH
Confidence 332222221 1100 11344455566677777776544 34445554332 16788889999
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
..++|..++|.+.+++.+..||...|.+.+++.+++.++.++
T Consensus 358 ~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 358 SAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999899999998888777666555443
No 113
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.14 E-value=2.9e-10 Score=91.95 Aligned_cols=130 Identities=18% Similarity=0.213 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019064 59 NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC 138 (346)
Q Consensus 59 ~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~ 138 (346)
.+.....++.++.|+++||+ |||+++..+..+..++.+++.... +.+.+.+...+.+++.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~ 65 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS-------------------NITVLIIARFLQGFGA 65 (141)
T ss_pred eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHH
Confidence 34566777889999999996 999999988888888766655431 3456777788899999
Q ss_pred cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+...+...++..|.+++++ +....+..+...++|..+++.+.+++.+..+|+..|.+..+..+++.+...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 66 AFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998654 577788888889999999999999998888999998887766655555443
No 114
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=3.9e-09 Score=100.47 Aligned_cols=186 Identities=13% Similarity=-0.002 Sum_probs=144.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064 8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV 87 (346)
Q Consensus 8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~ 87 (346)
+.|++++|..+.-... +...|.-+.+.+.+..++.+++|+|..|.++++..-.....+.-++-|.+.||+ |-|++..+
T Consensus 7 ~~k~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~ 84 (417)
T COG2223 7 RGKRIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTIL 84 (417)
T ss_pred ccccchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHH
Confidence 3456677777766554 344566667778888999999999999999999999999999999999999996 87777777
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
+.++..+-.+.+.++...| +.+.+++.-.++|++ |+..+...++....||+++ .+..
T Consensus 85 s~~l~~IP~~~~~~a~~~~----------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~A 141 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYP----------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGLA 141 (417)
T ss_pred HHHHHHHHHHHHHHHccCC----------------chHHHHHHHHHHhcc-cceehcccccccccCChhh------hhHH
Confidence 8888888777777764222 235566666667776 4566778888999999654 3455
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccc---hhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064 168 FNFYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLIGLIALAIGKPF 219 (346)
Q Consensus 168 f~~~y~~~niG~~i~~~~~~~i~~~~g---~~~~f~i~~~~~~~~~~i~~~~~~~ 219 (346)
...+- ..|+|..+...+.+.+....| |+..-.+..+.++++.+.+++..+.
T Consensus 142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 55555 899999999999999998888 8988888888888877777776554
No 115
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.13 E-value=1.5e-09 Score=107.26 Aligned_cols=176 Identities=16% Similarity=0.054 Sum_probs=129.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY-LSRFATCLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~-lGR~~~i~~~~~l~~ 93 (346)
+..+..++..++..+++++....++.|+++ +|++..+++.+.+.......++.+++|+++|+. .++++...++..+..
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 345666667777888888888899999875 799999999999988888888999999999984 233433333332322
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
.+..++.... ..+.+.+++...+.+++.+...++..+...|.++++. +.+.++.+..
T Consensus 320 ~~l~~ll~~~-----------------~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 376 (455)
T TIGR00892 320 NGLTHLLCAL-----------------AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVTI 376 (455)
T ss_pred HHHHHHHHHH-----------------hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHHH
Confidence 2322222111 0134566777888999999999999999999887433 5677888888
Q ss_pred HHHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++|.++++.+.+++.+.. +|+..|.+.+++.+++.+..+
T Consensus 377 ~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 377 VECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 99999999999999998877 599999888877666655433
No 116
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.13 E-value=4.2e-09 Score=101.43 Aligned_cols=171 Identities=9% Similarity=-0.047 Sum_probs=134.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.|..+..++..++-..++.+...+.++|+++ +|.+..+++...........+..++.+++.||+ |+++.+.++.++..
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACV 281 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHH
Confidence 3556777777888888888888999999975 899999999988887778888888999999996 99999999999998
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL- 172 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y- 172 (346)
++..++.... +.+.+++...+.++..|...+....++.++ ++++ +......+.
T Consensus 282 ~~~~~~~~~~-------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~ 335 (382)
T TIGR00902 282 GRWAIIGAIE-------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNA 335 (382)
T ss_pred HHHHHHHhHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHH
Confidence 8877665432 456677788899999999999999999876 6433 344444443
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
.+..+|..+++.+++++.+++|+ ..|.+.++..++++++.
T Consensus 336 ~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 336 LAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 35679999999999999999986 56777666666555443
No 117
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.12 E-value=6.3e-10 Score=108.46 Aligned_cols=168 Identities=12% Similarity=-0.029 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHhHHHHHHHccccc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEM---HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ 97 (346)
++..++....+......++.|+.+.+ +.+..+.+.+.+.......++.+++|+++||+ ||++.+.++.++..++..
T Consensus 229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~ 307 (420)
T PRK09528 229 VLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRII 307 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHH
Confidence 33334444445445556777776543 55666677878877777888999999999996 999999988888888776
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH-HHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-YLFATT 176 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~-~y~~~n 176 (346)
++.+.. +.+.+++...+.+++.+...+....++.|.++++. +...+.. +....+
T Consensus 308 l~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~ 362 (420)
T PRK09528 308 GSGFAT-------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQ 362 (420)
T ss_pred HHHhcc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHH
Confidence 665432 24456666777888887777777788888887543 2333333 455688
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
+|.++++.+.+++.+..||+..|.+.+++.++..++.+
T Consensus 363 lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 363 LGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887766555544433
No 118
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.11 E-value=6.7e-10 Score=109.64 Aligned_cols=146 Identities=16% Similarity=0.200 Sum_probs=127.9
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064 45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124 (346)
Q Consensus 45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~ 124 (346)
+++++..+-+.+.+.+..++.++++.+|+++||+ |-|+++.++.++..+++++..+++. ...
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-----------------~~~ 128 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-----------------IGF 128 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-----------------hcc
Confidence 5788999999999999999999999999999997 9999999999999999999888763 233
Q ss_pred HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHHH
Q 019064 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISS 203 (346)
Q Consensus 125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-~g~~~~f~i~~ 203 (346)
+.+++.+++.|++.|...|++..+.+...|. +| |+.+....+....+|.+++..+++++-+. .||+..|.+.+
T Consensus 129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~---~E---rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g 202 (466)
T KOG2532|consen 129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPP---NE---RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG 202 (466)
T ss_pred hhhHHHHHHhHHHHhHHHhhhhceeeeECCH---HH---HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence 4678999999999999999999999999994 33 68888888888899999999999999888 99999999888
Q ss_pred HHHHHHHHHHH
Q 019064 204 VATLIGLIALA 214 (346)
Q Consensus 204 ~~~~~~~~i~~ 214 (346)
++.++..+++.
T Consensus 203 ~~g~i~~~~w~ 213 (466)
T KOG2532|consen 203 IVGLIWFILWF 213 (466)
T ss_pred HHHHHHHHHHH
Confidence 76666555544
No 119
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.11 E-value=3.9e-09 Score=105.34 Aligned_cols=179 Identities=16% Similarity=0.173 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLT-NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~-~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
.|.+++..++-.++.++.....+.|+.+++|++..+.+.+.. .......++.+++|+++||+ ||++.+.++.++..++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344555556666777777778888988889999999998875 44568888999999999996 9998887766655554
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
.+++.+.+..+ .+...+.+...+..+..|...+...++..+..+++-+ ...+...+...
T Consensus 303 ~l~~~~l~~~~---------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~------~t~~gl~~s~~ 361 (491)
T PRK11010 303 NAGYWLLSITD---------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFS------ATQFALLSALS 361 (491)
T ss_pred HHHHHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc------HHHHHHHHHHH
Confidence 43333222100 1223333344443333333334445555566554432 34466777778
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
++|..+++.+.+++.+..||...|.+.+++.+++++.....+
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888899999999999999988887777766665444
No 120
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=6.5e-09 Score=99.48 Aligned_cols=183 Identities=17% Similarity=0.107 Sum_probs=141.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
+++.++..++..++...+.|...+++-+|+++..|++....+.+...|.+...++.+++|.++|| +.++++.....+.
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~ 286 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL 286 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence 45678888999999999999999999999999999999999999999999999999999999998 8888888887777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.+.+..+.+.. .+.+...+.+++.++..+..-.....-.++..| ++ .+...+.+.
T Consensus 287 a~~~l~l~~~~------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~sl~~ 341 (394)
T COG2814 287 ALALLALTFTG------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGSLNV 341 (394)
T ss_pred HHHHHHHHHhc------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHHHHH
Confidence 77666666543 133455555555666655554444444555222 22 345555666
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI 222 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~ 222 (346)
-+.|+|..+|..+++.+.+++|+.....+.++..++++++.+...+.+++
T Consensus 342 aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 342 AAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 67888888888888999999999999999998888888877766655443
No 121
>PRK09669 putative symporter YagG; Provisional
Probab=99.10 E-value=2.6e-09 Score=105.07 Aligned_cols=173 Identities=9% Similarity=0.076 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhH-HHHHHHHHHHHHH
Q 019064 22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFAT-CLVFGTLEVLSLV 97 (346)
Q Consensus 22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~-i~~~~~l~~~G~~ 97 (346)
+..+..++.+..+..++..|+++.+|++...++.+..+......+..|+.|+++||. +||||. ++.+.+...+..+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 445777877888888999999999999999999999999999999999999999993 487554 5556666666654
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++.. .|.... ......+++...+..++.........++.+|..++ ++| |.+..+|.....++
T Consensus 96 l~f~---~p~~~~----------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~--~~e---R~~l~~~r~~~~~~ 157 (444)
T PRK09669 96 LTFY---TPDFGA----------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITND--PRE---RHSLQSWRFALSFI 157 (444)
T ss_pred HHHh---CCCCCc----------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC--HHH---HHHHHHHHHHHHHH
Confidence 4432 243211 22445555555566666667777888888887754 333 56677777777888
Q ss_pred HHHHHHhhhhhhhh-------ccchhHHHHHHHHHHHHHHHH
Q 019064 178 AAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 178 G~~i~~~~~~~i~~-------~~g~~~~f~i~~~~~~~~~~i 212 (346)
|..+++.+...+.. ..||+..+.+.+++.++..++
T Consensus 158 G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 158 GGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 87777654332221 246777776666555444443
No 122
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.10 E-value=4.3e-09 Score=101.34 Aligned_cols=157 Identities=11% Similarity=-0.065 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch----hHHHHHHHHHHHHHHHH
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF----ATCLVFGTLEVLSLVML 99 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~----~~i~~~~~l~~~G~~ll 99 (346)
.++-.+++..+.+.++.|++ ++|.+..+.+.+.+++.....++.+++|.++||+ ||+ +.+.+...+.. ..+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HHH
Confidence 44444556666678888996 5799999999999999999999999999999996 984 33222221111 111
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA 179 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~ 179 (346)
... ..+.+.+++.+.+.+++.+...|...+...|..++ +...++......++|.
T Consensus 88 ~~~------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~--------~~~a~~~~~~~~~lg~ 141 (382)
T PRK11128 88 WFG------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ--------IGLDYGKVRLWGSIAF 141 (382)
T ss_pred HHh------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh--------ccCCcchHHHHHHHHH
Confidence 111 12467777888889999988888877777665221 2333445556678999
Q ss_pred HHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
++++.+++++.+++||+..|.+.++..++..+
T Consensus 142 ~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 142 VIGSALTGKLVSWFGEQAILWILTAGVASMLL 173 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 99999999999999999999877655444433
No 123
>PRK15075 citrate-proton symporter; Provisional
Probab=99.09 E-value=4.2e-09 Score=103.23 Aligned_cols=152 Identities=15% Similarity=0.136 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH-HHHHH
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL-SLVML 99 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~-G~~ll 99 (346)
+...++....++++..+++.|+++.+|++..+++.....+.....++.+++|+++||+ |||+.+..+..+..+ +...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 4445556778888999999999988999988888877777888889999999999996 999988776544332 21111
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH-HH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT-LA 178 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n-iG 178 (346)
.... +. .......+..++.+++.+...+...++..|.+|++. |+..+++.+...+ ++
T Consensus 323 ~~~~--~~--------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~ 380 (434)
T PRK15075 323 SWLV--AA--------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIF 380 (434)
T ss_pred HHHH--cC--------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHH
Confidence 1111 10 012223333445566666666667788889998654 4556666544444 35
Q ss_pred HHHHHhhhhhhhhccch
Q 019064 179 AMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 179 ~~i~~~~~~~i~~~~g~ 195 (346)
+.+++.+.+++.++.|+
T Consensus 381 g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 381 GGFTPAISTWLIHVTGD 397 (434)
T ss_pred hhhHHHHHHHHHHhcCC
Confidence 67789999999888775
No 124
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.09 E-value=3.6e-09 Score=103.25 Aligned_cols=182 Identities=14% Similarity=-0.041 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
..+..++..+.....+..+....+ ++.+++|++..+++...........++.+++|+++||+ |||+.+.++.++..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHH
Confidence 333444444444443434444444 44456899988888888888888999999999999995 9999999888887777
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC-GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~-g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
.+++.+... +...+ ..............+...+. .+..+....+..|.++++. ++......+..
T Consensus 363 ~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~ 427 (481)
T TIGR00879 363 LFVLGILGA-SFVTG--------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAA 427 (481)
T ss_pred HHHHHHHhh-cccCC--------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHH
Confidence 666654321 11000 00000122222222222222 2344666777789988543 56777788888
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.++|+++++.+.+++.++.+|...|.+.+++.+++.++..
T Consensus 428 ~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 428 NWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 9999999999999999888999988877766665555444
No 125
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.09 E-value=4.6e-09 Score=104.24 Aligned_cols=176 Identities=14% Similarity=0.056 Sum_probs=129.2
Q ss_pred chHH-HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----chhHHHH
Q 019064 14 FRAC-TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RFATCLV 87 (346)
Q Consensus 14 ~~~~-~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lG-----R~~~i~~ 87 (346)
++.. ..+....+++.+. +.+...+..++++++|++.++.+...+.......+-++ .|.++|++ + ||+.+++
T Consensus 24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHH
Confidence 4444 4444578888888 77778888999999999999998887777766666665 99999997 6 7777777
Q ss_pred HHHHHH-HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 88 FGTLEV-LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 88 ~~~l~~-~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
+.++.. ++.. .+ +. + ........+.+++.+++.+......-++..|+.+ ++++ ....
T Consensus 101 ~~~l~~~~~~~--~l-~~-~--------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~ 158 (468)
T TIGR00788 101 SGLLGSAILYG--LL-PG-K--------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPS 158 (468)
T ss_pred HHHHHHHHHHH--hc-cc-c--------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCC
Confidence 766552 2221 11 11 0 1122333446778999999999999999999998 3322 2455
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
..++.|.+.++|.++++.+++++.+.++|+..|.+.++..++..+...
T Consensus 159 ~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~ 206 (468)
T TIGR00788 159 LVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSN 206 (468)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 677888889999999999999999989999999888777666644333
No 126
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.09 E-value=4.3e-09 Score=105.59 Aligned_cols=151 Identities=13% Similarity=0.127 Sum_probs=116.9
Q ss_pred HHhHHHHHHHccccc-----CCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064 32 IANGISMVLYFKNEM-----HFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (346)
Q Consensus 32 ygv~~~l~~yl~~~l-----g~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~ 104 (346)
.|....+..++++.. ..+. .+.+++.+.+...+.++.++.|.++|++ |||++++++.+++.+|.++...+.
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~- 140 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP- 140 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh-
Confidence 355566665655421 1222 2347899999999999999999999995 999999999999999999888763
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
+...+++++++.|+|.|+....++.+++|.-+.+. |+...+.+.+..++|.+++..
T Consensus 141 ------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~ 196 (513)
T KOG0254|consen 141 ------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYC 196 (513)
T ss_pred ------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999988543 677777788888899998855
Q ss_pred hhhhhhhc-cchhHHHHHHHHHHHH
Q 019064 185 AIVYVFID-QGWWLGFLISSVATLI 208 (346)
Q Consensus 185 ~~~~i~~~-~g~~~~f~i~~~~~~~ 208 (346)
+.....+. ++||..+.+..+..++
T Consensus 197 ~~~~~~~~~~~Wr~~~~~~~i~~~~ 221 (513)
T KOG0254|consen 197 INYGTSKVYAGWRIPLGLALIPAVI 221 (513)
T ss_pred HhhhhccCCccHHHHHHHHHHHHHH
Confidence 44444332 4899887765544333
No 127
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.08 E-value=2.4e-09 Score=105.14 Aligned_cols=176 Identities=11% Similarity=0.036 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH-
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL- 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~- 94 (346)
..|.+.+..++....++++..+++.|+++..|++..+++.....+.+...++.+++|+++||+ |+++....+..+..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 455666666777788889999999999998999999999988888889999999999999996 644322233322222
Q ss_pred --HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 95 --SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 95 --G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
+..++... +. .+.+.....+++++++..+..........|.++++. ++...++++
T Consensus 331 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 387 (438)
T TIGR00712 331 TIAVIVYWMN---PA--------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 387 (438)
T ss_pred HHHHHHHHhc---CC--------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhc
Confidence 21111111 11 012223333344444433322222345567777433 566777777
Q ss_pred HHHHHHH-HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 173 FATTLAA-MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 173 ~~~niG~-~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
...++|+ ++++.+.+++.++.||..+|.+.++..+++.+..+.
T Consensus 388 ~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 388 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred hHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 7777774 678999999999899999998776666556555443
No 128
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.07 E-value=5.3e-09 Score=104.87 Aligned_cols=180 Identities=17% Similarity=0.162 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
+..+....+..+++...-..-++-+++ ++.-|....+.+..+...-..+..+++|.++||+ .|||.++.+-++..+..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHH
Confidence 334444455555554433333333333 4556677777777777778888999999999996 99999999988877766
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+++.+..... ..+.+.+++..++.+++.+...|...+.+.|..++++ .....+......|
T Consensus 90 ~~L~~l~~~~--------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~n 149 (524)
T PF05977_consen 90 LLLAVLAFFG--------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFN 149 (524)
T ss_pred HHHHHHHHhC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHH
Confidence 6655543221 2356778888889999999999999999999998644 5666777788899
Q ss_pred HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
+.-++||.+++.+....|-...|.+.+++.++++..+...++
T Consensus 150 iar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 150 IARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999888888888999988877766655544443
No 129
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.07 E-value=3.5e-09 Score=100.77 Aligned_cols=185 Identities=14% Similarity=0.056 Sum_probs=138.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
+.+..|.+.+..+..--+|.|+...++.|+++++|.++.+++.....+.....+.-++||+||||+ |.+|+..+...+.
T Consensus 216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~ 294 (417)
T COG2223 216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGM 294 (417)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999996 8777777777776
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++..++.+.. +... .+.....++.....+.+..|.-+..+..++...|+++ .+..-.+.-
T Consensus 295 ~~~~~~l~~~~--~~~~----------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vg 355 (417)
T COG2223 295 ALAAALLSLFL--TGFG----------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVG 355 (417)
T ss_pred HHHHHHHHccc--cccc----------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHH
Confidence 66666655532 1110 0234555555566666667777777777777777642 345555556
Q ss_pred HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064 173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
...++|+..-|...+...+..| +..+|.+.....+++.+..+...
T Consensus 356 a~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 356 AIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678887777777787777776 88888887777777776655433
No 130
>PTZ00207 hypothetical protein; Provisional
Probab=99.05 E-value=8.4e-09 Score=104.26 Aligned_cols=170 Identities=13% Similarity=0.008 Sum_probs=120.7
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
.++|..+...+....+....| +.. .....+.+++|++..+.+++.+...... .+.+++|+++||+ |||+++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y-~fs-v~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMY-AFN-LISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 345555555555555544443 333 4445678899999999998887644443 4566789999996 99999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..+|.+++.++. .... ..+.+.+++.+.+.|+|.+...+.....+.+.|+++ |+...+.
T Consensus 100 l~~iG~ll~ala~--~~~i-----------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-------RG~a~Gi 159 (591)
T PTZ00207 100 VFCLGTLLFALTF--QEVI-----------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-------RGAVVAI 159 (591)
T ss_pred HHHHHHHHHHHHh--cccc-----------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-------hHHHHHH
Confidence 9999999888752 1110 125778888999999999988888888889999731 5778888
Q ss_pred HHHHHHHHHHH-HHhhhhhhhhccchhHHHHHHHHHH
Q 019064 171 YLFATTLAAMI-GVTAIVYVFIDQGWWLGFLISSVAT 206 (346)
Q Consensus 171 ~y~~~niG~~i-~~~~~~~i~~~~g~~~~f~i~~~~~ 206 (346)
.....++|+++ +++...++.+ +|+..|.+.++..
T Consensus 160 ~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~ 194 (591)
T PTZ00207 160 MKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFA 194 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHH
Confidence 88889999875 5555555553 4666665554443
No 131
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.05 E-value=1.1e-08 Score=100.12 Aligned_cols=170 Identities=15% Similarity=0.048 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
..++....+|++..+++.|+.+.+|++..+++...........++.+++|+++||+ |||+++.++..+..+....+...
T Consensus 251 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~ 329 (432)
T PRK10406 251 FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSA 329 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHH
Confidence 33445788999999999999988999988888877776677777888889999995 99998877665543332211111
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH-HHHH
Q 019064 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL-AAMI 181 (346)
Q Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni-G~~i 181 (346)
. +.. .+....+..+.+..++.+...+...++.+|.||++. |...+++.|...++ ++..
T Consensus 330 ~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~ 388 (432)
T PRK10406 330 L--QNV-------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGS 388 (432)
T ss_pred H--HcC-------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhH
Confidence 1 100 011111111111222233333456677889999654 57777777765554 2334
Q ss_pred HHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 182 GVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 182 ~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
++.+..++.....|...+.+.++..+++.+..+
T Consensus 389 ~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 389 AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 667667665432355555555555555544433
No 132
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.05 E-value=1e-08 Score=101.78 Aligned_cols=185 Identities=17% Similarity=0.125 Sum_probs=145.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch--hHHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF--ATCLVFGT 90 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~--~~i~~~~~ 90 (346)
+.|.+..-++..++-+-+..++......|.++++|++..+...+..+.++.+.++.+++|++.||+ |.| ++++++.+
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 345666677778888899999999999999999999999988888889999999999999999996 988 88877776
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
++.+-. +..+....+... .-.+.+-+++.-++.|+..|+.++..-++.++..|++. ...+|+.
T Consensus 358 ~~~~i~-~~g~~G~~~~~~----------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgl 420 (477)
T PF11700_consen 358 LWIIIP-LYGLFGFWPSFF----------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGL 420 (477)
T ss_pred HHHHHH-HHHHHHhhhccc----------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHH
Confidence 663311 111111111110 01134556666668999999999999999999999754 4789999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHh
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~ 215 (346)
|....-..+.+||.+.+.+.+..| .|.++....++++++++++..
T Consensus 421 y~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 421 YAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988775 888888777777777776644
No 133
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.03 E-value=5.1e-09 Score=105.49 Aligned_cols=150 Identities=15% Similarity=0.115 Sum_probs=107.6
Q ss_pred HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~ 115 (346)
.+...|+.+++|-+ ...+++...+.....+..++.|.|+|.+ |||+.++++.+++.+|.++.+-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence 45567888888886 4567888889999999999999999985 999999999999999988866432
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~ 195 (346)
+...++.+..+.++|.|... .....++|..+.+. |...+.+..+..-+...+++.++..+..+.+|
T Consensus 130 -------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W 195 (599)
T PF06609_consen 130 -------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGW 195 (599)
T ss_pred -------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCc
Confidence 46678999999999977665 45566889998543 22222222222222222344444444445799
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 019064 196 WLGFLISSVATLIGLIAL 213 (346)
Q Consensus 196 ~~~f~i~~~~~~~~~~i~ 213 (346)
||.|.+.++...++++..
T Consensus 196 Rw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 196 RWIFYIFIIWSGIALVLI 213 (599)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 999999888766665543
No 134
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.03 E-value=9.6e-09 Score=96.48 Aligned_cols=165 Identities=12% Similarity=0.001 Sum_probs=122.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHccc--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKN--EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+..++..+..++--.+--++..+++.|+++ .+|++..+++.....+.+...++.+++++++||+ |++|.+.++..+
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 3445554455555444555677889999985 3799999999999999999999999999999995 999998888877
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..++.+++... +. .. ...+..+++++.+.+.|+..+...+.++++.. ..+..
T Consensus 218 ~~~~~~l~~~~---~~----------------~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~asai--- 269 (310)
T TIGR01272 218 AVLLSIGAALT---HG----------------YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----QGSGI--- 269 (310)
T ss_pred HHHHHHHHHHc---CC----------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH---
Confidence 77765444332 11 11 22355688999999999999999898875421 12222
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~ 207 (346)
.....+|+++.|.+.+++.|..|.+.+|.++.++.+
T Consensus 270 ~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 270 LCLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 245778999999999999998999889886665443
No 135
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.03 E-value=2.9e-08 Score=96.15 Aligned_cols=166 Identities=12% Similarity=-0.011 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
.++...+...+..+.+++.....+.|+.+.+|++..+.+.......+...++.++.|+++||+ ||++.+.++.++..+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 345555555555666666667778888888999998888777766677888899999999996 9999999888888888
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
..++.+....+ ....+.++++..+.++|.+...+.......+..+ ++ +++..+.+++..
T Consensus 295 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~ 353 (406)
T PRK15402 295 LLLAALATVIS--------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHcc--------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHHHHHHHHH
Confidence 77766542110 1234556778888999998877776665433322 21 567777778888
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHHH
Q 019064 176 TLAAMIGVTAIVYVFIDQGWWLGFLISS 203 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g~~~~f~i~~ 203 (346)
++|..+|+.+.+++.+..++.......+
T Consensus 354 ~~~~~~g~~~~~~l~~~~~~~~~~~~~~ 381 (406)
T PRK15402 354 MLIFTVGIELSKHAYLGGGNGLFNLFNL 381 (406)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHH
Confidence 8899999999998877767654443333
No 136
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.02 E-value=1.2e-08 Score=99.50 Aligned_cols=161 Identities=16% Similarity=0.069 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|..+.+++..++..++++......+.|++..++ +....+...........++.++.++++||+ ||++++.++..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 456667777888888887766666666666666 445566666667788888899999999996 999999999888888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y~ 173 (346)
+.+++.+. + .+.+.+++...+.++|.+...+...++.+|..+.++-+ .++..+.+++.+.+
T Consensus 300 ~~~~~~~~---~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 300 GYLIFFFA---G---------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHHHHc---c---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 77665542 1 12445566677788999988999999999987743211 11225778888888
Q ss_pred HHHHHHHHHHhhhhhhhhccch
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~ 195 (346)
..++|..+++.+.+++.+..||
T Consensus 362 ~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 362 VRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999888776665
No 137
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=6.3e-09 Score=94.25 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=129.8
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
...-+.+|.+.+..++-.++.+-..+.-+.++++.+|+|...++++.+...+.+....++.|.++|++ ||+-..+.+..
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 34456789888888888888777778888999999999999999999999999999999999999997 99877666544
Q ss_pred -HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 91 -LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 91 -l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
...+|+..++++-. --+.++.+.|+.....-....+.++-..||+. .+..|.
T Consensus 339 ~~tl~~H~~l~Ft~l---------------------sPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTayg 391 (459)
T KOG4686|consen 339 ILTLLGHSGLFFTFL---------------------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYG 391 (459)
T ss_pred HHHHHHhhhHHhhhc---------------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHH
Confidence 45567777766531 12456666776666555556666677777543 788899
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccc---hhHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLI 208 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g---~~~~f~i~~~~~~~ 208 (346)
..+...|+|-.+.+++++.|.++-| |--.|.+....+++
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL 433 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMAL 433 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999988644 55566655554443
No 138
>PRK10504 putative transporter; Provisional
Probab=99.01 E-value=1.5e-08 Score=100.10 Aligned_cols=158 Identities=11% Similarity=0.000 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.....++..++..+++.......+.|++..+|.+..+++...........++.++.|+++||+ ||++++.++..+..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4556667777777888766666778888878899999999888877777777888999999996 999999988887777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..++.... . ....+.+.+..++.++|.+...+....+..+.+++++ ++..++++.+.
T Consensus 340 ~~~~~~~~~---~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 397 (471)
T PRK10504 340 VSLLFMLVA---L-------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMI 397 (471)
T ss_pred HHHHHHhcc---c-------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHH
Confidence 655554321 1 1123334455666778888888888888888877543 56778888889
Q ss_pred HHHHHHHHHhhhhhhhhccch
Q 019064 175 TTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~ 195 (346)
.++|..+|+.+.+.+-+..|+
T Consensus 398 ~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 398 MQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 999999998888877555444
No 139
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.01 E-value=1.5e-08 Score=100.60 Aligned_cols=176 Identities=9% Similarity=0.013 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchh-HHHHHHHHHHHHHH
Q 019064 22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFA-TCLVFGTLEVLSLV 97 (346)
Q Consensus 22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~-~i~~~~~l~~~G~~ 97 (346)
+..+..++.+..+..+++.|+++.+|++...++.+..+....-.+..|+.|+++|| .+|||| -++++.+...+++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 45566788888888999999999999999999999999999999999999999994 149854 55566666666655
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++... |... +......+++...+..++.........++++|..++ ++| |.+.+++-....++
T Consensus 93 llf~~---p~~~----------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~--~~e---R~~l~~~~~~~~~i 154 (473)
T PRK10429 93 LLFSA---HLFE----------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD--KRE---REQLVPYPRFFASL 154 (473)
T ss_pred HHHcC---CCCC----------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC--HHH---HHHHHHHHHHHHHH
Confidence 55421 3221 122344455555567788888888888999887754 333 56666665666777
Q ss_pred HHHHHHhhhhhhhh-------ccchhHHHHHHHHHHHHHHHHHHh
Q 019064 178 AAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 178 G~~i~~~~~~~i~~-------~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
|+.+...+...+.+ ..+|+....+.+++.++..++.+.
T Consensus 155 g~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~ 199 (473)
T PRK10429 155 AGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR 199 (473)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 76555444332211 124555555555554444443333
No 140
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.00 E-value=2.2e-08 Score=96.45 Aligned_cols=171 Identities=16% Similarity=0.065 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+..+...++...+++....+++.|+.+.+|++..+++...........++.++.|+++||+ |+++.+.++..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 45444444454555555566778888888999999999999999999999999999999995 99999988888777776
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+++.... + ..+...+..++.++|.++..+.......+..++. +. .+... .....+
T Consensus 280 ~~~~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~---~~~~~--~~~~~~ 334 (382)
T PRK10091 280 LMLFFFG--G----------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGG--EL---LGAAG--GQIAFN 334 (382)
T ss_pred HHHHHHH--h----------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc--hH---HHHHH--HHHHHH
Confidence 5544321 1 1233344444555665555444443333333221 11 22221 244578
Q ss_pred HHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 019064 177 LAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 177 iG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~ 213 (346)
+|..+|+.+.+++.+. .+|+..+.+.++..+++...+
T Consensus 335 ~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 335 LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 9999999999998885 689999988766555444433
No 141
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.00 E-value=1.5e-08 Score=100.78 Aligned_cols=176 Identities=10% Similarity=0.009 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-----HHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-----TCLVFGT 90 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-----~i~~~~~ 90 (346)
..|.+.+..++....++++..+++.|+.+++|++..+++.....+.+...++.+++|+++||+ |||+ .......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555554555555667777889999888999999999999999999999999999999995 8652 2221111
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
....+..++.+. . ..+.+...+.+++.+++.++..+...+...+..+ + .++...++
T Consensus 332 ~~l~~i~~~~~~----~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~---~~g~~~g~ 387 (476)
T PLN00028 332 QTLGGVFCIWLG----R-------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR----R---SLGVISGL 387 (476)
T ss_pred HHHHHHHHHHhc----c-------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh----h---hchhhhhh
Confidence 111222122111 1 0123334444555555554444444444444332 1 14556666
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
.....++|+.+++.+.. ..+..+|..+|.+.+++.+++.++.++.+
T Consensus 388 ~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 388 TGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 55566667666665433 22345699999988888777777766554
No 142
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.99 E-value=9.4e-09 Score=103.16 Aligned_cols=140 Identities=16% Similarity=0.043 Sum_probs=114.9
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 019064 44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123 (346)
Q Consensus 44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~ 123 (346)
+..+.+........+++..+..+++++.|.+||+ +|||++++++.++..++.++.+++. +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------N 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------c
Confidence 3456677778888899999999999999999999 6999999999999998876655542 5
Q ss_pred HHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHH
Q 019064 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS 203 (346)
Q Consensus 124 ~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~ 203 (346)
.+.+++.+++.|++.++...+...+++|.++++. |....++ +.....++.+++..++|+.. +||+.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 7889999999999999999999999999999655 4555555 66667777788888888877 8999998876
Q ss_pred HHHHHHHHH
Q 019064 204 VATLIGLIA 212 (346)
Q Consensus 204 ~~~~~~~~i 212 (346)
+..++.++.
T Consensus 242 ~~~~~~~~~ 250 (521)
T KOG0255|consen 242 IPSGLFLLL 250 (521)
T ss_pred HHHHHHHHH
Confidence 655555444
No 143
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.97 E-value=1.8e-08 Score=98.32 Aligned_cols=165 Identities=8% Similarity=-0.119 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH-HHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT-CLVFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~-i~~~~~l~ 92 (346)
+..|...+..++....++++..++|.|+++ ..|.+..+++...........++.+++|+++||+ ||++. +.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 345667778888889999999999999987 3477888888888888889999999999999995 86664 33333333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++..+ .... + .....+.+..+.++|.....+.......|.++++ ++...+.+.+
T Consensus 321 ~~~~~~-~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~~~ 375 (412)
T TIGR02332 321 AAGWLL-ASAT--D----------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAVIN 375 (412)
T ss_pred HHHHHH-HHhc--C----------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHHHH
Confidence 333222 1110 0 1111222222333333322222223334455532 2678899999
Q ss_pred HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVA 205 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~ 205 (346)
...++|.++++.+.+.+.+..| |..+|.+.++.
T Consensus 376 ~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 376 ATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999988774 99888766553
No 144
>PRK11462 putative transporter; Provisional
Probab=98.97 E-value=4.1e-08 Score=97.26 Aligned_cols=179 Identities=13% Similarity=0.031 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchhHHH-HHHHHHHH
Q 019064 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCL-VFGTLEVL 94 (346)
Q Consensus 19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~~i~-~~~~l~~~ 94 (346)
.--..++..++.+..+..++..|+++.+|++...++.+..+-.+.-.+.-|+.|+++|| .+||||..+ ++.+...+
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 33355677788888888899999999999999999999999999999999999999997 369876554 45566666
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++... |...+ ......+++...+..++.........++.++..++ ++| |.+..+|....
T Consensus 93 ~~~llf~~---p~~s~----------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~e---Rt~l~s~r~~~ 154 (460)
T PRK11462 93 VCVLAYST---PDLSM----------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PTQ---RISLQSWRFVL 154 (460)
T ss_pred HHHHHHhC---CCCCc----------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHH---HHHHHHHHHHH
Confidence 66555532 43211 22344455555567788888888888999988875 333 57777787788
Q ss_pred HHHHHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHHh
Q 019064 175 TTLAAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
.++|.++++.+...+.+. .||.....+.+++.++...+.+.
T Consensus 155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 888877776654333222 35666555555544444443333
No 145
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.96 E-value=3.9e-08 Score=97.18 Aligned_cols=178 Identities=10% Similarity=-0.027 Sum_probs=118.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH--------
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC-------- 85 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i-------- 85 (346)
++.+|.+.+..++..+.++++..++|.|+.+.+|++..+++...........++.+++|+++|++ ++++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 45678888999999999999999999999999999999999988888888999999999999985 433211
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA 165 (346)
Q Consensus 86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~ 165 (346)
..+......+..++.... .. .......+.+.+.+.+.++..++......|..+ + ..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~---~~g 395 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPY-LS---------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP----R---FLG 395 (465)
T ss_pred HHHHHHHHHHHHHHHHHH-cC---------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh----h---HHH
Confidence 111111111111111110 00 012233334444444555555554444444433 2 256
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhhcc---chhHHHHHHHHHHHHHHHHHHh
Q 019064 166 SYFNFYLFATTLAAMIGVTAIVYVFIDQ---GWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 166 ~~f~~~y~~~niG~~i~~~~~~~i~~~~---g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
...+......++|+.+++.+.+++.+.. +|..+|.+.++..+++.+++..
T Consensus 396 ~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 396 FIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 7777778889999999999999887643 4888888888777777665543
No 146
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.96 E-value=1.3e-08 Score=95.91 Aligned_cols=155 Identities=14% Similarity=0.042 Sum_probs=122.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhH-HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANG-ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~-~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
|..+..+...++....+++.. ...+.|.++.+|.+..+.+.+.........++.++.|+++||+ ||++.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445666666777777777777 6677777777999999999998888888999999999999995 99998887766666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
++..++.... + +.+.+++..++.+++.+...+...++..|.+++++ +++.++.++.
T Consensus 289 ~~~~~~~~~~-----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 344 (365)
T TIGR00900 289 LAILVVGLTP-----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhhc-----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 6554444321 1 24567777888999999999999999999988432 6788888899
Q ss_pred HHHHHHHHHHhhhhhhhhccc
Q 019064 174 ATTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g 194 (346)
..++|..+++.+.+++.++.|
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999887653
No 147
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.95 E-value=1.1e-08 Score=96.80 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH--HH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT--LE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~--l~ 92 (346)
+..+.+.+..++.....+++...++.|+.+.+|++..+++.....+.....++.+++|+++||..+|++....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4566677777778888888889999999999999999999999999999999999999999985444443322211 11
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++..++... + ..+.....+..++.++...+..+....+..|.++++. ++..++++.
T Consensus 296 ~~~~~~~~~~---~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 352 (379)
T TIGR00881 296 IVSLLVYWLN---P--------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG 352 (379)
T ss_pred HHHHHHHhcC---c--------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence 1222111110 1 1123334444555665555555666677788887543 577888888
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGF 199 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f 199 (346)
...++|..+++.+.+++.++.||+..|
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 889999999999999999999988654
No 148
>PRK09848 glucuronide transporter; Provisional
Probab=98.94 E-value=5.6e-08 Score=95.64 Aligned_cols=155 Identities=14% Similarity=0.061 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHH-HHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATC-LVFGTL 91 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i-~~~~~l 91 (346)
..+.-...++..++++..+..++..|+++.+|++..+++.+.........+..++.|+++||. +||||.. .++.+.
T Consensus 9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~ 88 (448)
T PRK09848 9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP 88 (448)
T ss_pred HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH
Confidence 333333466777888887888889999999999999999999999999999999999999994 4777755 455554
Q ss_pred HHHHHHHHHhhhccCC-CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 92 EVLSLVMLTIQAYSKS-LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
..+..+++... |. .. .......+++...+.+++.+...++..++..+...+ ++| |..+..+
T Consensus 89 ~~~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~---r~~~~~~ 150 (448)
T PRK09848 89 LMIFSVLVFWV---PTDWS----------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ--PQS---RARLGAA 150 (448)
T ss_pred HHHHHHHHHhC---cCCCC----------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC--HHH---HHHHHHH
Confidence 44433332211 21 11 112334455556677888888888888877766654 333 3444444
Q ss_pred HHH-----HHHHHHHHHHhhhhh
Q 019064 171 YLF-----ATTLAAMIGVTAIVY 188 (346)
Q Consensus 171 ~y~-----~~niG~~i~~~~~~~ 188 (346)
-.+ ..++|.++++.+.+.
T Consensus 151 r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 151 RGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 333 344555555555443
No 149
>PRK10133 L-fucose transporter; Provisional
Probab=98.94 E-value=3.4e-08 Score=97.22 Aligned_cols=167 Identities=14% Similarity=0.058 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
.+...+..++-..+.++...+++.|+ ++.+|++..+++.....+.+...++.+++|+++||+ ||++++..+..+..++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34444555666677777778888896 567899999999999999999999999999999996 9999998887777666
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
..+..+. +. . .-..++.+.++|.+.+.|+..+...+.++++. + .-++.... .
T Consensus 339 ~~~~~~~---~~---------------~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-~---~as~l~~~----~ 390 (438)
T PRK10133 339 CLISAFA---GG---------------H--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-K---YGSSFIVM----T 390 (438)
T ss_pred HHHHHHc---CC---------------h--HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-c---cchhHHhH----H
Confidence 5443332 11 1 12455778999999999999999999987532 1 12333321 2
Q ss_pred HHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHH
Q 019064 176 TLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIA 212 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i 212 (346)
.+|+.+++.+.+++.+..| -+.+|.++.++.+.....
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3567777888889988887 788898877666544443
No 150
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.94 E-value=5.2e-08 Score=93.96 Aligned_cols=176 Identities=15% Similarity=0.048 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
..+..+...++...+..+.....+.|+.+ +|++..+.+.+...... ...++.+++|+++||+ |+++.+.++..+..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 35556666677777777777788889975 79999999998877654 5556688999999996 999998887766533
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..+...... .... ......+....+.+++.|...+...+...+..++++ .+.+.+......
T Consensus 287 ~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~ 348 (390)
T TIGR02718 287 LALLWFAQAA-FWLA------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQST 348 (390)
T ss_pred HHHHHHHHHH-cccC------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHHHH
Confidence 3222222111 1000 012222333334445566666666666666655411 146677777778
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
.++|..+++.+++++.+..||...|.+.+++.+++.+
T Consensus 349 ~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 349 RDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999899877766555544
No 151
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.93 E-value=6.1e-08 Score=93.31 Aligned_cols=168 Identities=10% Similarity=-0.007 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.++.+++..++-...+.+....++.|++ ++|.+..+.+...........+..++.|++.||+ |+++.+.++.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44566666666667777777788889996 5899988888888877777777888999999996 999999888888777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-H
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-F 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-~ 173 (346)
+.+++.... +.+.+++..++.+++.+...+....+..++ ++++ +.+..+.+. .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 336 (382)
T PRK11128 283 RWGLMGSTT-------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL 336 (382)
T ss_pred HHHHHHhhh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence 765544321 355667778888888888777777776665 3211 344555554 4
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
...+|..+++.+.+++.|..|+. .|.+.+++.+++++
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~ 373 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHH
Confidence 55678889999999999988874 55554444444433
No 152
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.93 E-value=6.5e-08 Score=94.15 Aligned_cols=144 Identities=15% Similarity=-0.009 Sum_probs=100.3
Q ss_pred HHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 019064 30 GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLH 109 (346)
Q Consensus 30 a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~ 109 (346)
.++++...++.|+++ .|.+..+++...........++.+++|+++||+ ||++.+..+.++..++..++... +.
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~-- 318 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ-- 318 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc--
Confidence 344466788888876 699988888888888888899999999999996 99999888877766554433321 11
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 019064 110 PPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 189 (346)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i 189 (346)
.....+...++..+.+..+..+..+.+..|.++++. +++.++..+...++|+.+++.+.+++
T Consensus 319 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 319 ------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred ------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 011112122222223333444556677788888543 56777777888899999999999999
Q ss_pred hhccchhHH
Q 019064 190 FIDQGWWLG 198 (346)
Q Consensus 190 ~~~~g~~~~ 198 (346)
.+..|+...
T Consensus 381 ~~~~g~~~~ 389 (426)
T PRK12307 381 GITMGLGAA 389 (426)
T ss_pred HHcccHHHH
Confidence 998886554
No 153
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.93 E-value=1.9e-08 Score=100.39 Aligned_cols=154 Identities=10% Similarity=-0.008 Sum_probs=120.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|......+..++..+++++....++.|+++.+|++..+++...........++.+++|++.||+ ||++.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3344555667777778888888999999999999999999999999999999999999999996 999988888888888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..++.... + ..+.+......++.|+|.|...+.......+..++++ +......++..
T Consensus 338 ~~~~l~~~~--~--------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 395 (495)
T PRK14995 338 SFYGLAMTD--F--------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMA 395 (495)
T ss_pred HHHHHHHhc--C--------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHH
Confidence 776655432 1 1123445567788899999888888887877776443 45666777888
Q ss_pred HHHHHHHHHhhhhhhhh
Q 019064 175 TTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~ 191 (346)
.++|..+|+.+.+.+.+
T Consensus 396 ~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 396 YELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999888877655
No 154
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.92 E-value=1.9e-08 Score=99.46 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|..+..++..++..+.+++....++.|+++.+|++..+++...........++.++.|++.||+ |||+.+.++..+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 3445556667777888899999999999999999999999998888889999999999999995 999999888888888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..++.... .+ ....+.+.....+.++|.+...+.......+.+++++ +....+.++..
T Consensus 334 ~~~~~~~~~-~~--------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~ 392 (485)
T TIGR00711 334 GFYWRAFTF-TP--------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFT 392 (485)
T ss_pred HHHHHhccC-CC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHH
Confidence 776655321 01 1234455666788899998888777777777776432 56777788888
Q ss_pred HHHHHHHHHhhhhhhhhc
Q 019064 175 TTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~ 192 (346)
.++|+.+|+.+.+.+.++
T Consensus 393 ~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 393 RQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999998888777664
No 155
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.91 E-value=9.2e-08 Score=92.73 Aligned_cols=171 Identities=16% Similarity=0.165 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
+.+++..++-..+........+.|+.+++|++..+.+.+..... +...++.+++|+++||+ ||++.+.++..+..+..
T Consensus 212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~ 290 (402)
T PRK11902 212 WALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSN 290 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33344444444433322234455677779999988888876554 45778889999999995 99998877776665554
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHH----HHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL----YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l----~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
+.+.+.+..+. +.+.+.+.. +..+++.+...+....+..+.++.++ ++.+.
T Consensus 291 l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 345 (402)
T PRK11902 291 LGYWVLAVTPK---------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLS 345 (402)
T ss_pred HHHHHHHhcCC---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHH
Confidence 44433221111 223333333 34556677777888888888877332 23333
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
...++|..++..+++++.+..||+..|.+.+++.++++++.+
T Consensus 346 ~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 346 ALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 344677766667889999999999999888777766655543
No 156
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.91 E-value=1.1e-07 Score=90.80 Aligned_cols=162 Identities=12% Similarity=0.036 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+...+...+....+++.....+.|+++++|.+..+++.+.........++.+++|+++||+ ||++.+.++..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444455555666777777888899888999999999988888888999999999999995 99999988888777776
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+++..... +. ......++....+.++|.+...+.......|.++++ +.+..+.+.....
T Consensus 287 ~~~~~~~~-~~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~ 345 (385)
T TIGR00710 287 VLLEITAI-LG-------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHV-------AGTASALFGTLRL 345 (385)
T ss_pred HHHHHHHH-hc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------chHHHHHHHHHHH
Confidence 66655431 11 012344555566788888888888888888877632 2444555444444
Q ss_pred H-HHHHHHhhhhhhhhccchhHHHHH
Q 019064 177 L-AAMIGVTAIVYVFIDQGWWLGFLI 201 (346)
Q Consensus 177 i-G~~i~~~~~~~i~~~~g~~~~f~i 201 (346)
. |++.++. .+.+.++.+|...+..
T Consensus 346 ~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 346 VLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHH-HHhccccChHHHHHHH
Confidence 4 4554444 4455555555544433
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.89 E-value=4.5e-08 Score=94.60 Aligned_cols=171 Identities=12% Similarity=0.005 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHccccc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEM---HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
..+.++...++-...+......++.|+.+.+ +.+....+.+.+.......+..++.|++.||+ |||+.+.++..+.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3444444455545555555566777877654 45555566667766677777888999999995 9999999888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH-H
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-Y 171 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~-~ 171 (346)
.++..++.... +.+.+++...+.+++.+...+....+..+..+++. +...+.. +
T Consensus 295 ~l~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~ 349 (396)
T TIGR00882 295 SVRIIGSSFAT-------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGF 349 (396)
T ss_pred HHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHH
Confidence 88766544321 23445666677777766555555556666666433 2333333 4
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
..+.++|+.+++.+.+++.+..||...|.+.+++.++..++
T Consensus 350 ~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 350 QFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999998877766655544
No 158
>PRK09848 glucuronide transporter; Provisional
Probab=98.89 E-value=6.2e-08 Score=95.34 Aligned_cols=162 Identities=12% Similarity=0.042 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.+...++..++...+++......+.|+++.+|.+................++.++.++++||+ |+++++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4456666677777788877777778888888898766554444433455677888999999996 999999999988888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhh-hhhhhhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~-~~~~~~~f~~~y~ 173 (346)
|.+++.+. |. .+.+.+++.+.+.++|.+...+...++.+|..|.++-+. ++..+.+++.+.+
T Consensus 307 ~~~~~~~~---~~--------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 307 GYLLFFWV---SV--------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred HHHHHHHc---Cc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 87666542 21 134566677888999999999999999998887543211 1123667778888
Q ss_pred HHHHHHHHHHhhhhhhhhccc
Q 019064 174 ATTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g 194 (346)
...+|..+++.+.+.+-+..|
T Consensus 370 ~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 899999999888776644333
No 159
>TIGR00895 2A0115 benzoate transport.
Probab=98.88 E-value=3.8e-08 Score=93.91 Aligned_cols=148 Identities=16% Similarity=0.087 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+..+.+.+..++....++++..+++ |+.+++|.+..+++...........++.+++|+++||+ ||++.+.........
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3345555666677788888877777 66677899999999998889999999999999999996 988544433333333
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
..++.. .. + +....++..++.+++.++..+...++.+|.++++. +...+++++..
T Consensus 328 ~~~~~~-~~--~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~ 382 (398)
T TIGR00895 328 AVLVGS-TL--F----------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGI 382 (398)
T ss_pred HHHHHH-Hh--h----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHH
Confidence 322222 11 1 23455667778889999999999999999998432 67788888888
Q ss_pred HHHHHHHHHhhhhhh
Q 019064 175 TTLAAMIGVTAIVYV 189 (346)
Q Consensus 175 ~niG~~i~~~~~~~i 189 (346)
.++|..+++.+.+++
T Consensus 383 ~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 383 GRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhHHhc
Confidence 999999999888765
No 160
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.87 E-value=1.5e-07 Score=92.08 Aligned_cols=165 Identities=15% Similarity=0.084 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q 019064 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML 99 (346)
Q Consensus 20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll 99 (346)
+.+..++...++-...+.++.|+++++|++..+.+.+.+.+.....++++++|.++||+-+||+++.++.++..++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 44555566666655669999999999999999999999999999999999999999996344777777777666655544
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC--ChhhhhhhhhHHHHHHHHHHH
Q 019064 100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN--DPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~--~~~~~~~~~~~f~~~y~~~ni 177 (346)
.+.. +.+.+++.+.+.+++.+...+...+...+...+. +......+.+.+ ..+
T Consensus 87 ~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~------G~l 141 (418)
T TIGR00889 87 AQVT-------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVM------GTI 141 (418)
T ss_pred HHhc-------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeee------hhH
Confidence 4321 2444555666666665555444333221111100 000000122333 347
Q ss_pred HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (346)
Q Consensus 178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~ 210 (346)
|.++++.+++.+.....|. .|.+.++..++..
T Consensus 142 G~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 142 GFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 8888888888774433343 4555554444433
No 161
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.87 E-value=8e-08 Score=91.32 Aligned_cols=154 Identities=14% Similarity=-0.009 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+..+.+.+..++....++++..+++.|+++ .|.+..+++.+...+.....++.++.|+++||+-+|++++.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 455666666667788888998999999975 7999999999999999999999999999999963566777777777777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++.... . .... ....+.++|.|...+...+...+..++++ .++..++..+..
T Consensus 276 ~~~~~~~~~---~---------------~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~ 330 (355)
T TIGR00896 276 GLCGLLFAP---M---------------HGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQSI 330 (355)
T ss_pred HHHHHHHhh---h---------------hHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHHH
Confidence 766555431 1 1111 13457889999988887777666554321 135566666667
Q ss_pred HHHHHHHHHhhhhhhhhccc
Q 019064 175 TTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g 194 (346)
.++|.++++.+.+++.++.|
T Consensus 331 ~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88888999999999988765
No 162
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.87 E-value=1.2e-07 Score=93.36 Aligned_cols=186 Identities=12% Similarity=-0.008 Sum_probs=122.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
.+..|.+.+..++.--+|.+....++.|+++.+ +...+............+..+++|++|||+ |++|++.++.++..
T Consensus 251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~ 327 (462)
T PRK15034 251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMA 327 (462)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHH
Confidence 345788888888888888889889999998765 333333334445677888899999999995 99999998887776
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC----------Ch-----
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN----------DP----- 158 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~----------~~----- 158 (346)
++...+.+. +|.. ...+.+.+.++.+.+.++.|.-+..+..++.+.|+++ ++
T Consensus 328 i~~~~~~l~--lp~~-----------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 328 IFSALLFLT--LPGT-----------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHHHH--hccc-----------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 665443332 2321 1235666766666666666666666666666666530 00
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHh
Q 019064 159 KGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 159 ~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
..+++.+...++.-....+|+.+-|.+.+...+. -++..+|.+..+..++++++-+.
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 1112345566666666777777777665655444 45777888777777766666554
No 163
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.86 E-value=2e-07 Score=92.14 Aligned_cols=154 Identities=8% Similarity=-0.058 Sum_probs=101.7
Q ss_pred HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (346)
Q Consensus 37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~ 116 (346)
+.+.+ .+.+|.+...+............++.+++|+++||+ |||+.++.+.++..++.+++..... +.
T Consensus 293 ~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~~--------- 360 (479)
T PRK10077 293 YAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-TQ--------- 360 (479)
T ss_pred HHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-cC---------
Confidence 33433 346788877666666666777888899999999996 9999999999988888777664321 11
Q ss_pred CCCCchhHHHHHHHHHHHHHhccc-cccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------hh
Q 019064 117 SCLKGAIAAYFYGSLYLYSLGCGG-NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV------YV 189 (346)
Q Consensus 117 ~~~~~~~~~~~~~~l~l~~iG~g~-~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~------~i 189 (346)
. .......++.+.+++.+. ..|+..++..|.++++. |...+++.+...++|..+++.+.+ ++
T Consensus 361 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~ 429 (479)
T PRK10077 361 ----A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWL 429 (479)
T ss_pred ----c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccch
Confidence 0 112233344444444443 34677888899987433 677777777777777777655444 44
Q ss_pred hhccchhHHHHHHHHHHHHHHHHH
Q 019064 190 FIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 190 ~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
.++.+|+..|.+.++..+++.++.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 430 VAHFHNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred hhhccCccHHHHHHHHHHHHHHHH
Confidence 567888888877665555444443
No 164
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.86 E-value=5.5e-08 Score=97.27 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHH------------HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASN------------TLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~------------~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
...++..+.+|++..+++.+++ .+|++..+++. ..........++.++.++++||+ |||++++++.
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~ 372 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGF 372 (502)
T ss_pred HHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHH
Confidence 3445567788998888888885 57876543221 11122334445678889999995 9999998888
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.+..++..++.+... + . ... ..+........++..+..+....+.+|.+|.+. |....+
T Consensus 373 ~~~~~~~~~l~~~~~-~-~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g 431 (502)
T TIGR00887 373 FILTVLFFVLGFAYN-H-L------------STH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHG 431 (502)
T ss_pred HHHHHHHHHHHHHHH-h-c------------chh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHH
Confidence 777766655554321 0 0 001 111111111222223344556667789998654 678888
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhc----------cchhHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFID----------QGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~----------~g~~~~f~i~~~~~~~~~~ 211 (346)
+.+...++|+++++.+.+++.+. .++...|.+.+++.+++.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 483 (502)
T TIGR00887 432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL 483 (502)
T ss_pred HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence 88888999999999999988763 3445566666655555544
No 165
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.85 E-value=6e-08 Score=99.57 Aligned_cols=246 Identities=12% Similarity=-0.009 Sum_probs=180.8
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHH
Q 019064 46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAA 125 (346)
Q Consensus 46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~ 125 (346)
.+....+.+...+++....++++++....+|-..|+...+...++.+.++.+.+.+.+ ++... +.....
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a~~----------~~~~~~ 83 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGAIP----------SSGHPL 83 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hccCc----------ccccch
Confidence 3444556778889999999999999999999999999999999999999988887775 23211 123345
Q ss_pred HHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc-hhH-------
Q 019064 126 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWL------- 197 (346)
Q Consensus 126 ~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g-~~~------- 197 (346)
...+.++.++++.+|..++.+++.+++.+..+ ..++++++++|+|..+.+.+. .+++..+..... +..
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCcc
Confidence 55678888999999999999999999998754 266678999999999999885 566666665443 332
Q ss_pred HHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccc
Q 019064 198 GFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFR 277 (346)
Q Consensus 198 ~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (346)
-++..++.+++.++.++.+...++..+|.+.+-..+.+++....+..+.+ ..+
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~----------------------~~~----- 212 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKR----------------------FST----- 212 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHh----------------------hcc-----
Confidence 23467777888888888888888877887766656777765555433110 000
Q ss_pred cccccccccCCCCCCCCccc--CCchhHHHHHHHHhHhHHHhhhHHHHHHHhcccchhhhccccccC
Q 019064 278 CLDKAAIVPKDSTAAAPWRV--CTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSF 342 (346)
Q Consensus 278 ~ld~a~~~~~~~~~~~~w~~--~~~~~Ve~vK~~~r~lpi~~~~i~~~~~~~q~~t~~~~Q~~~m~~ 342 (346)
.+..+. ..|-. ....+++++|.+.|+++++...+++++.+.|....+..|..+|+.
T Consensus 213 -~~~~~~--------~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~ 270 (654)
T TIGR00926 213 -RSEHWP--------LHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATR 270 (654)
T ss_pred -CCcccc--------hhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 111110 12211 244557889999999999999999999999988888888877764
No 166
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.85 E-value=2.5e-07 Score=89.69 Aligned_cols=166 Identities=13% Similarity=0.039 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|..+..+...++...++++...++++++.+++|++..+++.....+.....++.++.|++.||. + ++.+..+..+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~-~~~l~~~~~~~~~ 293 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-V-KLALAGAPLVLAV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-c-hhHHHHHHHHHHH
Confidence 4455555555666666777666764444567899999889988888888999999999999994 4 4444444444333
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
...++.... .+.+.+.+...+.+++.+...+...+++.+..+++. ++..+.++..
T Consensus 294 ~~~~l~~~~------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 348 (394)
T PRK10213 294 SALVLTLWG------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQA-------EKAGSIQVAV 348 (394)
T ss_pred HHHHHHHHh------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccH-------HHHHHHHHHH
Confidence 322222221 124556667778899998888888888887776331 2334455566
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL 207 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~ 207 (346)
.++|..+|+.+.+++.+..|+...+...+++.+
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 789999999999999998898888877665443
No 167
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=6.6e-08 Score=94.64 Aligned_cols=159 Identities=14% Similarity=0.114 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|....+++..++..+++.......+.|.+..+|.+ ...+.......+...++.++.++++||+ ||++++..+..+..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 56777888888888888888888888888888887 4456666677888888999999999996 999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhh-hhhhhhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~-~~~~~~~f~~~y~ 173 (346)
+.+++.+... .+.+.+++...+.++|.++..+...++.+|..+.++-+. ++..+.+++.+.+
T Consensus 303 ~~~~~~~~~~-----------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~ 365 (428)
T PF13347_consen 303 GFLLLFFLGP-----------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF 365 (428)
T ss_pred HHHHHHHHHh-----------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence 9888776531 256788888999999999999999999999998643221 1224667777888
Q ss_pred HHHHHHHHHHhhhhhhhhc
Q 019064 174 ATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~ 192 (346)
...+|..++..+.+.+.+.
T Consensus 366 ~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 366 FIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 8999999998887766443
No 168
>PRK10054 putative transporter; Provisional
Probab=98.83 E-value=8.5e-08 Score=92.97 Aligned_cols=174 Identities=14% Similarity=-0.023 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHccc--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKN--EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
|..+...+..++..+.+......++.|+.. +.+.+....+.+...+........++.|.+.||+ |+++.+.++..+.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 445555566666666666565666777653 3455555566666666666666667889999996 9999998888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.++...+.... .+.+.+.+...+.++|.+...|+..+.+.+..|++. ++.+++. +
T Consensus 285 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~-~ 339 (395)
T PRK10054 285 VIGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSA-Q 339 (395)
T ss_pred HHHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhH-H
Confidence 88876655421 134445566778889988888888888888777543 3455554 3
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
...++|..+|+.+.+++.|..|....|.+.+++..++.++..
T Consensus 340 ~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 340 SLGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 356689999999999999999988888776555554444443
No 169
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.82 E-value=2.5e-08 Score=97.58 Aligned_cols=178 Identities=13% Similarity=0.042 Sum_probs=127.2
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hcccchhH-HHHHHHHHHHHHHH
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD----TYLSRFAT-CLVFGTLEVLSLVM 98 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD----~~lGR~~~-i~~~~~l~~~G~~l 98 (346)
.+...+.+.....++..|+++.+|+++..++.+..+......+..|+.|+++| | +||||- ++++..+..++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHH
Confidence 35566667667788999999999999999999999999999999999999999 6 487664 55677778887776
Q ss_pred HHhhhccC-CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 99 LTIQAYSK-SLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 99 l~l~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
+.... | ... .......+.+..++..++......+..++++|..++.+ | |.+..++-....++
T Consensus 89 lf~~~--p~~~~----------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--~---R~~l~~~~~~~~~~ 151 (428)
T PF13347_consen 89 LFSPP--PAGLS----------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--E---RTRLSSWRMIFSMI 151 (428)
T ss_pred hhccc--cchhh----------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh--h---hhhHHHHHHHHHHH
Confidence 66431 2 111 01234455666777889999999999999999987644 2 56666666666777
Q ss_pred HHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064 178 AAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALAIGKPF 219 (346)
Q Consensus 178 G~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~~~~~~ 219 (346)
|.++...+.+.+.+. .+|++...+.+++.++..++.....|+
T Consensus 152 g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 152 GSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 776554444443321 168887777777666666666555554
No 170
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.81 E-value=1.4e-07 Score=103.12 Aligned_cols=163 Identities=13% Similarity=-0.011 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh-HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA-GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~-~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
.++..++..++-.+..+.+..+++.|+.+.+|++.. .++.+.....++..++.++.|+++||+ ++++.+.++.++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444555555566667778899999999999988 888888888888899999999999996 998888888777777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+++.... +.+.+++..++.+++.++..+...+++.+..+++. +++.++..++.
T Consensus 312 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~ 366 (1146)
T PRK08633 312 SLFLLPTAP-------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFL 366 (1146)
T ss_pred HHHHHHHhh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHH
Confidence 665555432 34556677788899999988888999988887654 57778888888
Q ss_pred HHHHHHHHHhhhhhhhh-ccchhHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFI-DQGWWLGFLISSV 204 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~ 204 (346)
.++|.++++.+++.+.. .+++...|.+.+.
T Consensus 367 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 88888777666655543 2344445544433
No 171
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.79 E-value=4.5e-07 Score=90.07 Aligned_cols=165 Identities=13% Similarity=0.005 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|....+++..++..++++......+.|++..++ +....+.+.........++.++.++++||+ ||++++.++..+..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 566777777788887777666666655555544 344445555555567778888999999996 999999988887776
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y~ 173 (346)
+.+.+.+....+ ..+.+.+++...+.+++.+...+...++.+|..|.++-+ .++..+.+|+...+
T Consensus 309 ~~~~~~~~~~~~--------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~ 374 (473)
T PRK10429 309 SCGVLLLMGLAA--------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM 374 (473)
T ss_pred HHHHHHHHhccC--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence 665554332111 113455666777888999999999999999997743211 11223557888888
Q ss_pred HHHHHHHHHHhhhhhhhhccch
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~ 195 (346)
...+|..+++.+.+++.+..||
T Consensus 375 ~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 375 VVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999998888877554443
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.78 E-value=5.4e-07 Score=86.87 Aligned_cols=177 Identities=14% Similarity=0.040 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHH--HHHHHHH-HHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTL--TNFFGST-FLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~--~~~~~~~-~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
...+....+.+.+.+.-+.+.++.|+++ .|.+..+.+... ....... ...|++.++.+||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 4556677788888888788888988875 599999998863 3334444 44555558889984 99998766653322
Q ss_pred H-HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 94 L-SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 94 ~-G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
. ....+... .+. ......+.....+.++..+...+...++..|+.++++ +........
T Consensus 81 ~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~ 139 (390)
T TIGR02718 81 SACLASLALV--GPD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQI 139 (390)
T ss_pred HHHHHHHHcC--Ccc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHH
Confidence 1 12222211 111 1112233334444555555555555555555544221 233444455
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
++..+|.+++..+.+++.++.||+..|.+.++..++..+..+..
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 56688999998888899999999999998887766555544433
No 173
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.74 E-value=3.6e-07 Score=88.76 Aligned_cols=154 Identities=14% Similarity=0.065 Sum_probs=101.4
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
.....++.|+++..+ +..+.+.+...............+++.|+.++.++.+..+..+..++..++....
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 344567888876655 5566777666655544444444455665545666667777777777765554331
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~ 192 (346)
+.+...+...+.++|.+...|...+...|..|++. +++.++.+....++|..+|+.+.+++.++
T Consensus 296 ----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 296 ----------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 23344555566778888888898999999998654 57778888888999999999999999876
Q ss_pred c---c-hhHHHHHHHHHHHHHHHH
Q 019064 193 Q---G-WWLGFLISSVATLIGLIA 212 (346)
Q Consensus 193 ~---g-~~~~f~i~~~~~~~~~~i 212 (346)
. + ....+.+..++.+++.++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHH
Confidence 3 2 244554444444444433
No 174
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.73 E-value=4e-07 Score=91.44 Aligned_cols=174 Identities=17% Similarity=0.062 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
.+..++...++-.+...++...+|.+..+.+|.+....+.+.+++.+++.++.++.+.+.+++ ++.+.+..+.+++.++
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~ 297 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALA 297 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHH
Confidence 344445555555565556667788898999999999999999999999999999999999985 8888888888877777
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
.+.+.++. +.+...+.+++.|++.........+..-...|++ .+++.++.+....
T Consensus 298 ~~~lal~~-------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~~~ 352 (524)
T PF05977_consen 298 LLLLALSP-------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQMVF 352 (524)
T ss_pred HHHHhcch-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHHHH
Confidence 66665542 4566667777888888777777666665555532 3788999988888
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+..+|..+.+++.+.+|-..++.+.++.++++.++...
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999998888777666665543
No 175
>PRK09669 putative symporter YagG; Provisional
Probab=98.72 E-value=6.5e-07 Score=88.06 Aligned_cols=161 Identities=12% Similarity=0.103 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
|..+.+++..++...+..... .+..|+ +..++.. ...+...........++.+++++++||+ ||++++.++.++..
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~ 305 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRG-GATLYYVNYVLLRP-DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFV 305 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHh-hhhheeeeeecCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 334455555555555554333 344444 4344432 2233344445566667788899999996 99999988876665
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYL 172 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y 172 (346)
++...+.+. + ..+.+.+++...+.++|.++..+...++.+|..|.++.+ .++..+.+++.+.
T Consensus 306 ~~~~~~~~~---~--------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~ 368 (444)
T PRK09669 306 ILSALIFFI---P--------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNL 368 (444)
T ss_pred HHHHHHHHh---C--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHH
Confidence 443322221 1 114556677778899999999999999999998743321 1122356778888
Q ss_pred HHHHHHHHHHHhhhhhhhhccch
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~ 195 (346)
++.++|..+|+.+.+++-+..||
T Consensus 369 ~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 369 FAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999988887665555
No 176
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.72 E-value=2.5e-07 Score=101.41 Aligned_cols=183 Identities=13% Similarity=-0.089 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+.++..++..++-.+.+.++...++.|+++.+|.+...++.+.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4566667777777788888889999999999999999999999999999999999999999986 655655555554444
Q ss_pred HHHHHHhhhccCCCCCCCCCCC-CC-CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKS-SC-LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~-~~-~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
+.+.+.+.. .....++..... .+ ....+.+.++++.++++++.+...+...++..+..+++. +++.++.+.
T Consensus 304 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~ 376 (1140)
T PRK06814 304 FGLDLAFAS-SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANN 376 (1140)
T ss_pred HHHHHHhcc-cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHH
Confidence 433333210 000000000000 00 001234566778888999999999999999999988655 577778878
Q ss_pred HHHHHHHHHHHhhhhhhhh-ccchhHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVA 205 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~~ 205 (346)
...++|..+++.+.+.+.+ ..++...|.+.+++
T Consensus 377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 377 VLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 8888888889888888864 34666666554443
No 177
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.71 E-value=9.5e-08 Score=95.52 Aligned_cols=175 Identities=15% Similarity=0.088 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHH---HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGIS---MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~---l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
-|.+.+..++-++..+|+... +...+.+.++.+..+++++.++..+..++..|+.+.+.||+ |.|.+++.+.+++.
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 467777777777777777644 34555678899999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH-HHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLY-LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~-l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
+|+++-..+. +.+.+++... +.|+|.|.........++..|+.+ |+..-..--
T Consensus 123 ~g~~lssF~~-------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia~ 176 (509)
T KOG2504|consen 123 LGLLLSSFAT-------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIAV 176 (509)
T ss_pred HHHHHHHHHh-------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhhh
Confidence 9988877653 3555666554 478999999888888888777632 233333323
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
....+|..+=+.+.-++.+++||+.++++-+.+++-.++.-...++
T Consensus 177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3455566665666777888899999998877766544444444444
No 178
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.70 E-value=2.5e-07 Score=87.84 Aligned_cols=145 Identities=15% Similarity=0.113 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
..+.+++..++..++++++...++.|+++ +|++..+.+.+..... ....++.+++|+++||+ ||++.+.+++++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 36666777777899999999999999987 9999999888887665 45678889999999996 999999888888777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+..++...+. ...... -+..+.+.+....++.+++.+...+...++..+.+|++. +++.++.++..
T Consensus 288 ~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~ 353 (356)
T TIGR00901 288 TNAGFVWLAS--NGHHDG------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHh--cCcccc------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHH
Confidence 6665544321 100000 000234556666777899999999999999999999765 56777766554
Q ss_pred HH
Q 019064 175 TT 176 (346)
Q Consensus 175 ~n 176 (346)
.|
T Consensus 354 ~~ 355 (356)
T TIGR00901 354 SA 355 (356)
T ss_pred Hh
Confidence 43
No 179
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.70 E-value=4.5e-07 Score=85.32 Aligned_cols=153 Identities=14% Similarity=0.096 Sum_probs=105.9
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 019064 44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123 (346)
Q Consensus 44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~ 123 (346)
+++|++..+.+.+...-.+.+.+..++.|.++||+ |||+..+..+++|.+..+.-. ..+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~--------------------~~~ 120 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH--------------------SSN 120 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh--------------------ccc
Confidence 56899999999998887888888888999999996 999999999999988754211 114
Q ss_pred HHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhhhhhccch--hHHHH
Q 019064 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGW--WLGFL 200 (346)
Q Consensus 124 ~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-~~~niG~~i~~~~~~~i~~~~g~--~~~f~ 200 (346)
...+++++++-|+++.....+.-+-..-+..+++-+ ++.....|+..- +...+-++++..++-++.+..+. ..+|.
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~ 199 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFD 199 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHH
Confidence 678999999999999988887777655444433311 112344454332 22333445555555566665554 67888
Q ss_pred HHHHHHHHHHHHHHhcCc
Q 019064 201 ISSVATLIGLIALAIGKP 218 (346)
Q Consensus 201 i~~~~~~~~~~i~~~~~~ 218 (346)
.+.++.+++.++.....+
T Consensus 200 ~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 200 AAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 888777777666554443
No 180
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=3.4e-07 Score=90.55 Aligned_cols=180 Identities=17% Similarity=0.193 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----hhHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR----FATCLVFGT 90 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR----~~~i~~~~~ 90 (346)
+.+|.+.+..+++.++++.+..++|.|+.+.+|++..+.+....+-.....+.-+++|++||+...| ..+..+.-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 5689999999999999999999999999999999999999999998999999999999999997331 122233333
Q ss_pred HHHHHHHHHHh-hhccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064 91 LEVLSLVMLTI-QAYSKSLHPPDCGKSSCLKG-AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (346)
Q Consensus 91 l~~~G~~ll~l-~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f 168 (346)
+...|..++.+ .++.+. +.. .....+.++..+.|+-.+|+.-|..-. +.|+ -...+
T Consensus 338 i~~~~~ai~l~~l~~~~~-----------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~----------a~~l~ 395 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSD-----------EHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQH----------AGFVM 395 (466)
T ss_pred HHHHHHHHHHHeeeecCC-----------CcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchH----------HHHHH
Confidence 33332222221 222221 111 233334444445555555554443211 2222 35667
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhc---cchhHHHHHHHHHHHHHHHHHHhc
Q 019064 169 NFYLFATTLAAMIGVTAIVYVFID---QGWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 169 ~~~y~~~niG~~i~~~~~~~i~~~---~g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
+...+..++.++++|.+++++..+ -.|+..|++.+++++++.++|.+.
T Consensus 396 g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 396 GIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 777888999999999999988743 379999999999888888776543
No 181
>TIGR00898 2A0119 cation transport protein.
Probab=98.69 E-value=4.5e-07 Score=90.45 Aligned_cols=128 Identities=11% Similarity=-0.051 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019064 60 FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG 139 (346)
Q Consensus 60 ~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g 139 (346)
.......+.+++++++||+ |||+.+.++.++..++.+++... +.. ..+...+...+.+++.+
T Consensus 364 ~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~---~~~--------------~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 364 SGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV---PVD--------------LYFLRTALAVLGKFGIT 425 (505)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc---CCC--------------chHHHHHHHHHHHHHHH
Confidence 3455667788899999995 99999998888877776655443 211 11233334445556666
Q ss_pred ccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 140 GNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 140 ~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
+..+....+.+|.+|++. |+...++......+|+++++.+.+ +. ..++...+.+.+++.+++.++.
T Consensus 426 ~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHH
Confidence 677888889999998533 577788888889999999998887 43 3556667766665555444433
No 182
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.67 E-value=2.2e-07 Score=87.20 Aligned_cols=143 Identities=18% Similarity=0.195 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHcccccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 18 TFVFVLSALENMGFIANGISMVLYFKNEMHFD-IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s-~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
|.++...++..+.+++...+++.|+.+.+|++ ..+++...........++.++.|+++||+ |+++.+.+......++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHH
Confidence 44556666666788888999999999999999 78888888888989999999999999995 99888887777777766
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT 176 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n 176 (346)
+.+.+... ..+....+...++.+++.+...+...++..|.+|++. +++.++.+....+
T Consensus 288 ~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 345 (352)
T PF07690_consen 288 LGLLLLPF----------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIGS 345 (352)
T ss_dssp HHHCCSHH----------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 65555431 1134566667888999999999999999999997543 5788888888899
Q ss_pred HHHHHHH
Q 019064 177 LAAMIGV 183 (346)
Q Consensus 177 iG~~i~~ 183 (346)
+|..++|
T Consensus 346 ~~~~igP 352 (352)
T PF07690_consen 346 LGGIIGP 352 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHCC
Confidence 9998876
No 183
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2e-07 Score=92.57 Aligned_cols=144 Identities=19% Similarity=0.158 Sum_probs=109.5
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCch
Q 019064 43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGA 122 (346)
Q Consensus 43 ~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~ 122 (346)
.+++++...+-+.+.++|.++..++.+++|+|.||+ .-.+.+..+.+...+-. +++.. -+
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~-~~~~~------------------~~ 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFG-FLTAA------------------VH 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHH-HHHHH------------------Hh
Confidence 356788888999999999999999999999999996 73443333333222211 11111 12
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh------ccchh
Q 019064 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------DQGWW 196 (346)
Q Consensus 123 ~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~------~~g~~ 196 (346)
+.+.+++.+++.|+.+++..|+...+.+..|.+++ +...+.++|.+.++|.++|..+...+.+ ..||+
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~ 206 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR 206 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce
Confidence 57789999999999999999999999999999654 5677888898999999999888877543 46999
Q ss_pred HHHHHHHHHHHHHHHH
Q 019064 197 LGFLISSVATLIGLIA 212 (346)
Q Consensus 197 ~~f~i~~~~~~~~~~i 212 (346)
+.|+|.+++.++..++
T Consensus 207 ~~FiI~G~i~~~~gi~ 222 (495)
T KOG2533|consen 207 WLFIIEGVITLVLGIV 222 (495)
T ss_pred eehhHHHHHHHHHHhe
Confidence 9999998776554443
No 184
>PRK11043 putative transporter; Provisional
Probab=98.65 E-value=3.1e-06 Score=81.78 Aligned_cols=152 Identities=7% Similarity=-0.080 Sum_probs=100.3
Q ss_pred HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064 25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY 104 (346)
Q Consensus 25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~ 104 (346)
.+....++.....++.|++ ++|++..+++...........++.++++++.||+ |+++++.....+..++.+.+.+...
T Consensus 213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556666677787776 4799998888877777777788888999999996 9988776665555554443333221
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
.+ ........+...+.+++.+...+...+...|+.+++ +++..+++......++..++.
T Consensus 291 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~g~~~~~~~~~~~~~~~ 349 (401)
T PRK11043 291 LS--------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQA-------TGKAAALQNTLQLGLCFLASL 349 (401)
T ss_pred hc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCccc-------ChHHHHHHHHHHHHHHHHHHH
Confidence 11 012344555666788888888888888777777642 355666666656667777777
Q ss_pred hhhhhhhccchhHHH
Q 019064 185 AIVYVFIDQGWWLGF 199 (346)
Q Consensus 185 ~~~~i~~~~g~~~~f 199 (346)
+.+.+.+......++
T Consensus 350 ~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 350 LVSALISTPLLTTGS 364 (401)
T ss_pred HHHHccCCChhHHHH
Confidence 777776644344333
No 185
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.64 E-value=2.6e-06 Score=81.37 Aligned_cols=122 Identities=6% Similarity=-0.100 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+..++..++...+++......+.|+.+++|++..+++.......+...++.+++|+++||+ |||+++.++..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34444445555555666666667788888999999999999999999999999999999995 99999988877654432
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD 154 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~ 154 (346)
+.+......+ ...+...++..+.+.+.+...++......|..+
T Consensus 275 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T PRK11102 275 IWLVVSALLD---------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP 317 (377)
T ss_pred HHHHHHHHHh---------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc
Confidence 3222221101 123334444445555555556666666666665
No 186
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.64 E-value=4.8e-07 Score=86.48 Aligned_cols=176 Identities=13% Similarity=0.095 Sum_probs=137.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+.+..-++..+.-+=+-.++......|-.+.+|++..+...+...-+..+.++.+++|+|+||+ |-|+++.++.+++.+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3555556666666666677888889999999999999999998889999999999999999995 999999999888877
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
..+...... ...-+.+.-.++|+..|+.++..-++.++..|+++ -+.+|+.|...
T Consensus 331 ~~~~~~~~~-------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyalt 385 (438)
T COG2270 331 AALYLIFLE-------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALT 385 (438)
T ss_pred HHHHHHHcc-------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhh
Confidence 655444331 11223334457899999999999999999999765 37899999999
Q ss_pred HHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhc
Q 019064 175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
...++.+||...+.+.+.. +-+.++..-.+++.+++++++..
T Consensus 386 gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v 428 (438)
T COG2270 386 GRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV 428 (438)
T ss_pred hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence 9999999999888776654 46677766666666666665543
No 187
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=6.1e-07 Score=88.46 Aligned_cols=139 Identities=15% Similarity=0.248 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 019064 54 SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYL 133 (346)
Q Consensus 54 ~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l 133 (346)
+.++++|..+..++..++|+++|++ |||++++++.++..++.++..++... ....++++++++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~----------------~~~e~li~GR~i 125 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA----------------PSFEMLILGRLI 125 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh----------------hhHHHHHHHHHH
Confidence 3556788999999999999999996 99999999999988887777766432 256789999999
Q ss_pred HHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh-hhhhh-hccchhHHHHHHHHHHHHHHH
Q 019064 134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA-IVYVF-IDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 134 ~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~-~~~i~-~~~g~~~~f~i~~~~~~~~~~ 211 (346)
.|+..|......+-|+.|.-|++- |+..-.....+.++|.+++..+ ...+- ..-.|.+.+.++.+..++.++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654 4444445566788888888444 33343 445699999888876666655
Q ss_pred HHHh
Q 019064 212 ALAI 215 (346)
Q Consensus 212 i~~~ 215 (346)
.+.+
T Consensus 200 ~l~~ 203 (485)
T KOG0569|consen 200 LLPF 203 (485)
T ss_pred HHhc
Confidence 5543
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.59 E-value=2.1e-06 Score=82.64 Aligned_cols=165 Identities=8% Similarity=-0.050 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch---hHHH-HHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF---ATCL-VFGT 90 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~---~~i~-~~~~ 90 (346)
|..|.+.+..++....+|++..+++.|+++ .|++.. ++......... +.+..++++||. .|+ +... ....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~---g~~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILA---GLIGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHH---HHHHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 567888889999999999999999999965 678754 44433333332 334458999985 543 3322 2232
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF 170 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~ 170 (346)
+..++..++.... +.....+.+.+.+++..+..+...++.+|.+|++. |++..++
T Consensus 266 ~~a~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~ 320 (368)
T TIGR00903 266 LIAAFFLALAFEL-------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGA 320 (368)
T ss_pred HHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccch
Confidence 2222222222111 11223334445556666666778889999998654 6888899
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
.+...++|+.+++.+.+.+.. |....|.+-++..+++.+.
T Consensus 321 ~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 321 IGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 999999999888888876663 5555665555555444444
No 189
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.58 E-value=3.5e-07 Score=86.23 Aligned_cols=118 Identities=18% Similarity=0.061 Sum_probs=94.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHH
Q 019064 47 HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY 126 (346)
Q Consensus 47 g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~ 126 (346)
+.+..-++.+-+.|+..-+++.++.|-+||+| |||.++.++++...+...++..+. +...
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~-------------------~F~a 123 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR-------------------NFAA 123 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-------------------HHHH
Confidence 33445677888899999999999999999998 999999999888888777766653 4556
Q ss_pred HHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 127 ~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~ 191 (346)
|.+++++.|+.-|-. ..+.++++|.+++++ +...++....+..+|..+||.+++|+.+
T Consensus 124 fv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 124 FVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 777799988876654 556788999998754 4556666677788999999999999877
No 190
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.58 E-value=4e-06 Score=81.22 Aligned_cols=157 Identities=10% Similarity=-0.070 Sum_probs=107.6
Q ss_pred HHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCC
Q 019064 28 NMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKS 107 (346)
Q Consensus 28 ~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~ 107 (346)
...+......++.|+++.+|.+..+++.+.........++.++.+++.|++ ++++.+..+..+ .++..++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~----- 290 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ----- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH-----
Confidence 344455556667788888999999999999999999999999999999985 888877766432 2222222211
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064 108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 187 (346)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~ 187 (346)
.+.+...+.+.+.+++.+...++..+...+.-+++. .+++.++..+...++|..++..+.+
T Consensus 291 --------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 291 --------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred --------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHHH
Confidence 124445566777888888888888887765433211 1466777788889999999888877
Q ss_pred hhhhccchhHHHHHHHHHHHHHHH
Q 019064 188 YVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 188 ~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
.+ +.+|-+..+.+.++..++...
T Consensus 352 ~~-~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 352 LL-VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred HH-HHcCCCHHHHHHHHHHHHHHH
Confidence 55 456666666655544444443
No 191
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.58 E-value=4.5e-06 Score=81.78 Aligned_cols=212 Identities=17% Similarity=0.102 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHH-HHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATC-LVFGTL 91 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i-~~~~~l 91 (346)
.-.---...+..++.+--+..++..|.++..|++...++.+..+--+.-.+.-|+.|+++||. +||+|-. +++.+.
T Consensus 13 eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip 92 (467)
T COG2211 13 EKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP 92 (467)
T ss_pred HHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence 333334456677788888889999999999999999999999999999999999999999974 5876654 445566
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..+...++..+ |... .+......++.-.+.+++...+.....++.++..++ ++| |.+..+|-
T Consensus 93 ~~i~~~l~F~~---p~~~----------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~~E---R~~l~s~R 154 (467)
T COG2211 93 FAIVAVLLFIT---PDFS----------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD--PQE---RASLTSWR 154 (467)
T ss_pred HHHHHHHHHcC---CCcc----------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC--HHH---HHHHHHHH
Confidence 66665555543 3221 123455556667788899999999999999998775 454 67888898
Q ss_pred HHHHHHHHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHH-hcCccceecCCCCC-cchhHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALA-IGKPFYRIQQPGES-PLVRVAQVIVVAIK 242 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~-~~~~~~~~~~p~gs-~l~~i~~v~~~a~~ 242 (346)
.+..++|.++...+.+.+... .||+..-.+.+++..++.+.-+ -.++++.+..|..+ ...+..+.+..-.|
T Consensus 155 ~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~ 234 (467)
T COG2211 155 MVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFK 234 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHc
Confidence 889999988776665554332 3555444444433333333222 22333332233222 33445545555556
Q ss_pred hcc
Q 019064 243 NRK 245 (346)
Q Consensus 243 ~~~ 245 (346)
||.
T Consensus 235 Nrp 237 (467)
T COG2211 235 NRP 237 (467)
T ss_pred cch
Confidence 653
No 192
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.57 E-value=2e-06 Score=84.01 Aligned_cols=166 Identities=7% Similarity=-0.068 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccc-cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNE-MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~-lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
..+..++..++--.+..++.++++.|+.+. .+.+...++.....+.+...++.+++|+++||+ +++|.+.++..+..+
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 344445555555555557778899998653 355555556666666678889999999999995 999988877777666
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
..+++... + .. .....+.+++++.+++.|.+.+...+.++++.. ..+.. .-.
T Consensus 312 ~~ll~~~~---~----------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~-----~~s~~--l~~- 363 (410)
T TIGR00885 312 LCLGSIFA---G----------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK-----YGAAG--LVM- 363 (410)
T ss_pred HHHHHHHc---C----------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH--HHH-
Confidence 65555442 1 11 224666778888999999999999999985431 11111 222
Q ss_pred HHHHHHHHHhhhhhhhhcc------chhHHHHHHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQ------GWWLGFLISSVATLIGL 210 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~------g~~~~f~i~~~~~~~~~ 210 (346)
.-+|+++.|.+.+++.|+. +.+.+|.+|.++.+...
T Consensus 364 ~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (410)
T TIGR00885 364 AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVIF 405 (410)
T ss_pred HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHHH
Confidence 3399999999999999954 58889999887765443
No 193
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.55 E-value=3.9e-06 Score=78.86 Aligned_cols=173 Identities=10% Similarity=0.038 Sum_probs=139.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
--+.-++++.+=-|-+.-++ ..+..-+++++|+|.++++.+.+.-..+.....++..+++.|+ |-.+++..++++..+
T Consensus 12 ~li~gIvlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~ 89 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAA 89 (395)
T ss_pred HHHHHHHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHH
Confidence 34444444555557777655 4455678889999999999999998888889999999999995 999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
|.++=... +...++.+-.+.+.|.+..+..++..+-+-|+++. ......|-.+
T Consensus 90 G~~iR~~~--------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~s 142 (395)
T COG2807 90 GILIRSLG--------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTS 142 (395)
T ss_pred HHHHHhcc--------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHH
Confidence 86654432 35678899999999999999999999999998653 4566677779
Q ss_pred HHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhc
Q 019064 175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
.++|+.+++.+++.+.++. ||+.+..+=+...++++++.+--
T Consensus 143 l~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 143 LGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred HHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999998888876 79999888777777777776655
No 194
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.55 E-value=6.8e-06 Score=79.15 Aligned_cols=71 Identities=10% Similarity=0.077 Sum_probs=57.4
Q ss_pred HHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 31 ~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
........+.|+.+++|++..+.+...........++.++.|+++||+ ||++.+.++..+..++.+++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444556677788999998888888888888889999999999995 99999999988888877766654
No 195
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.54 E-value=6.4e-06 Score=77.45 Aligned_cols=161 Identities=14% Similarity=0.063 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+..|.+.+.--+.++.||.+..++|.++.+ .|+|..+++..++..+.......+++-++++|.-.+|+..+..+..+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 557888888888999999999999999985 6999999999999999999999999999999877788888888888889
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
|.+-+.+. |. +.+.+. .+++|+|.|+..|....++.+..++ +++..+.+.+- .-.
T Consensus 287 G~~G~~~~---P~---------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~--a~~Aa~LSgma---Qg~ 341 (395)
T COG2807 287 GLVGLLLA---PG---------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSD--AAIAAALSGMA---QGV 341 (395)
T ss_pred HHHHHHHh---hh---------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCC--hHHHHHHHHHh---hhh
Confidence 88777754 32 222222 5789999999999999999998875 44433333332 223
Q ss_pred HHHHHHHHHhhhhhhhhcc-chhHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLI 201 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i 201 (346)
.++=+.+||.+.+++.|.. +|......
T Consensus 342 GYllAa~GP~l~G~lhDa~gsw~~~~~~ 369 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDATGSWSAPLVL 369 (395)
T ss_pred hHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence 4444566788999998875 46655443
No 196
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.52 E-value=9.3e-07 Score=88.44 Aligned_cols=178 Identities=15% Similarity=0.161 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+.++.+.+...+-.++|+--...++.|.. ..|++..+++.+++...+...++-++.|+++|+. ..++..+....+...
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 56777778888889999888889999998 7899999999999999999999999999999986 533333333333333
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
|...+.. |- ....+.+..--.+.|+..|.+.+.......|..+.++ .++.+.+....
T Consensus 376 gl~~~~~----p~-------------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l~~ 432 (509)
T KOG2504|consen 376 GLARLFL----PF-------------ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLLLF 432 (509)
T ss_pred HHHHHHH----HH-------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHHHH
Confidence 3333222 11 1245667777778888888888888778888887543 67888899999
Q ss_pred HHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064 175 TTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK 217 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~ 217 (346)
..+++++++.+.+++.|..| |...|..++++++++.+..+...
T Consensus 433 ~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 433 QGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999988877 99999999888888876665544
No 197
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.50 E-value=6e-07 Score=86.49 Aligned_cols=142 Identities=11% Similarity=0.088 Sum_probs=99.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHH
Q 019064 48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYF 127 (346)
Q Consensus 48 ~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~ 127 (346)
+++...+.+..+-.+...+++++.||++|++ |||+++...+++..++.++..++ .-.++ +..-+..+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s----~~~~~--------~~~~m~~L 147 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLS----VGTTS--------PLGVMMTL 147 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccC----CCCCC--------CcchhhHH
Confidence 6666777778888889999999999999996 99999999999998888744432 21111 12356788
Q ss_pred HHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-----------cchh
Q 019064 128 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-----------QGWW 196 (346)
Q Consensus 128 ~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-----------~g~~ 196 (346)
..-++++|+|.||=.|+..+...|+-.++.++. ..+.+|...-|.+-.|+.++.++..-.... .=||
T Consensus 148 ~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa--~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWR 225 (538)
T KOG0252|consen 148 CFFRFLLGIGIGGDYPLSATIMSESANKKTRGA--FIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWR 225 (538)
T ss_pred HHHHHHhhccccCCCcchHHHhhhhhhhccccc--eeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHH
Confidence 889999999999999999998888876554221 123445555555666666655444332211 2388
Q ss_pred HHHHHHHH
Q 019064 197 LGFLISSV 204 (346)
Q Consensus 197 ~~f~i~~~ 204 (346)
..|++.++
T Consensus 226 l~~glg~v 233 (538)
T KOG0252|consen 226 IIFGLGAV 233 (538)
T ss_pred HHHHHHHH
Confidence 88876554
No 198
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.42 E-value=5e-09 Score=102.80 Aligned_cols=134 Identities=15% Similarity=0.236 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019064 52 GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL 131 (346)
Q Consensus 52 ~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 131 (346)
..++..+.+..+..++.+++|+++||+ |||+++.++.++..+|.++..++.. . .+.+.+.+++
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~---~-------------~~~~~~~~~R 109 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS---Y-------------NNFWMLLIGR 109 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc---c-------------cccccccccc
Confidence 456777888999999999999999996 9999999999999999877666531 0 1457789999
Q ss_pred HHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh---ccchhHHHHHHHHHHHH
Q 019064 132 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI---DQGWWLGFLISSVATLI 208 (346)
Q Consensus 132 ~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~---~~g~~~~f~i~~~~~~~ 208 (346)
++.|+|.|+..+....+..|..+++. |+....+......+|.+++..+...+.. +.+|+..+.++.+..++
T Consensus 110 ~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~ 183 (451)
T PF00083_consen 110 FLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLL 183 (451)
T ss_pred cccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999998654 4556666666777887777665443322 34599888776655443
No 199
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.41 E-value=2.8e-06 Score=80.64 Aligned_cols=140 Identities=15% Similarity=0.046 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
..+.+.+..++....++++...++.|+++.+|++..+++.....+.....++.+++|+++||+ ||++.+..+..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 345555556666667778888999999999999999999888888888899999999999996 9988887777666666
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064 96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT 175 (346)
Q Consensus 96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ 175 (346)
..++.+.. +. ..+...+...+.+.+++.|...+...+..+|.++++ ++...+......
T Consensus 305 ~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~g~~~g~~~~~~ 362 (366)
T TIGR00886 305 AFLVVLGL--VS-------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRA-------TGAVSGLVGAIG 362 (366)
T ss_pred HHHHHhcC--CC-------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchhh-------cccHHHHHHHhc
Confidence 55554421 10 003444555555666666666666667777776521 355555544445
Q ss_pred HHH
Q 019064 176 TLA 178 (346)
Q Consensus 176 niG 178 (346)
++|
T Consensus 363 ~~g 365 (366)
T TIGR00886 363 NLG 365 (366)
T ss_pred cCC
Confidence 544
No 200
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.40 E-value=1.4e-05 Score=78.97 Aligned_cols=185 Identities=16% Similarity=0.081 Sum_probs=112.9
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
+..++....++...++..+.-.-......+.+-..-|++..++..+.........++.+++.++-||+ |||+.++++..
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~ 343 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLS 343 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHH
Confidence 34456677777777777765444444444445456799999999999999999999999999999996 99999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-ccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG-GNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g-~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
+..+..+++++...+.... ..+-....+++.++..++.+ |.-|...-+.+|.++... |...+.
T Consensus 344 ~~~~~~~~~~~~~~l~~~~----------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s 407 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSF----------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQS 407 (485)
T ss_pred HHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHH
Confidence 9888777777654322110 00111122344444333333 334556667789999765 444444
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
+-+....+..++-......+++..|- ..|.+..+..++..+..
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~ 450 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYL 450 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHH
Confidence 44444444444444445566666664 33443333333333333
No 201
>PRK11462 putative transporter; Provisional
Probab=98.38 E-value=1.8e-05 Score=78.49 Aligned_cols=158 Identities=11% Similarity=0.049 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|....++...++..++..........|.+..+|... ..+.+...+.....++.+++++++||+ |||+++..+..+..+
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAV 305 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 344555556666666665555555555555555433 334455666777788889999999996 988887655544433
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh-hhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL-ASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~-~~~f~~~y~ 173 (346)
..+++.+. |. .+...+++..++.+++.++..+...++.+|..+.++-+..+++ +.+++.+-+
T Consensus 306 ~~~~~~~~---~~--------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f 368 (460)
T PRK11462 306 ISLAMFFV---PM--------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF 368 (460)
T ss_pred HHHHHHHh---ch--------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence 32222221 21 1222334445566777777777777888888774321111112 344666667
Q ss_pred HHHHHHHHHHhhhhhhhh
Q 019064 174 ATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~ 191 (346)
...+|..++..+.+++-+
T Consensus 369 ~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 369 VLKLGLAFGGALIGWMLA 386 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 788888888777666543
No 202
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.33 E-value=1.3e-05 Score=79.70 Aligned_cols=187 Identities=10% Similarity=-0.011 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhH----HHHHHHHHHHHHHHHHHH----HHHHhhhcccchhH--HH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAG----ASNTLTNFFGSTFLLCLV----GGFISDTYLSRFAT--CL 86 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~----a~~~~~~~~~~~~~~~ll----gG~laD~~lGR~~~--i~ 86 (346)
...+++...+-...|.-..+.++.|..+.++.+... .+.+.+.-.....+..++ ...+.||..+.+.. +.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344444445555666666677888877655443211 334444333333333333 23556652232332 36
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
+++++..+++..+.+..... .. ....+.+++.+..++.++|+....|...++..++.|++. |+.
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~--~~--------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~ 417 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFA--DA--------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQ 417 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhc--CC--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHH
Confidence 78888888877776542111 00 012467889999999999999999999999999988543 688
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPF 219 (346)
Q Consensus 167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~ 219 (346)
.++.++.+..+|..++..+.....+..+|...|...++.+++..++++...++
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999998888777666678878877777666666665554443
No 203
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.32 E-value=5.3e-05 Score=72.97 Aligned_cols=141 Identities=9% Similarity=-0.044 Sum_probs=90.0
Q ss_pred HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019064 35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG 114 (346)
Q Consensus 35 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~ 114 (346)
....+.|+++.+|++..+.+...........++.++.+++.||+ ||. ...+.....++.+++.......
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STL--MWQSVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHhc--------
Confidence 34456677777999998888877766667777777888888875 632 2223223333322222211100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g 194 (346)
....+.+.++..+.++|.+...|...+...|.++++ ++..........++|+.+++.+.+++.++..
T Consensus 296 ------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 296 ------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 113455666778888999999999999888887632 2344455555678999999988888876544
Q ss_pred hhHHH
Q 019064 195 WWLGF 199 (346)
Q Consensus 195 ~~~~f 199 (346)
+....
T Consensus 363 ~~~~~ 367 (394)
T PRK11652 363 FSLGL 367 (394)
T ss_pred HHHHH
Confidence 44333
No 204
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.29 E-value=3.2e-05 Score=75.92 Aligned_cols=157 Identities=13% Similarity=0.050 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|....+++..++...++.-..+.++.|.+..+|.+...+............++.++.-.+++++ ||+++..++.++..+
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 4555666677777777766667778888888999888888887777777777789999999995 999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh-hhhhHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK-ALASYFNFYLF 173 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~-~~~~~f~~~y~ 173 (346)
+.+++.+.. ..+.++.++...+.++|.+...+...++.+|..|.++-+.-. .-+-.++.+-+
T Consensus 315 ~~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF 377 (467)
T COG2211 315 GYLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTF 377 (467)
T ss_pred HHHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHH
Confidence 998888763 125678888889999999999999999999998743322111 12445555556
Q ss_pred HHHHHHHHHHhhhhhh
Q 019064 174 ATTLAAMIGVTAIVYV 189 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i 189 (346)
..=+|.+++..+.+++
T Consensus 378 ~~K~g~ala~~~~g~~ 393 (467)
T COG2211 378 FRKLGLALAGFIPGWI 393 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6667777776665554
No 205
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.27 E-value=1.1e-05 Score=78.03 Aligned_cols=177 Identities=13% Similarity=0.015 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH--
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE-- 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~-- 92 (346)
+..|..-...+.--+++-...+.++.+++++.|++..+.+.+.++-.....+.+|+.|.++||. |.||.++....+.
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4555555566666666656668899999998999999999999999999999999999999995 8666554433322
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
..|-....+-. |.++ .+ +.++..+.++..+.......+.. |.+.++-++ +..-=|+---
T Consensus 86 l~~pff~~v~~--pll~------------~n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~sr---~~~feYG~~R 144 (412)
T PF01306_consen 86 LFGPFFIYVFG--PLLQ------------SN---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERVSR---RNGFEYGRAR 144 (412)
T ss_dssp TCHHHHHHTHH--HHHH------------TT----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHHH---HHSS-HHHHH
T ss_pred HHHHHHHHHHH--HHHH------------HH---HHHHHHHHHHHHHHHHcccchHH-HHHHHHHHH---HhcCCcchHH
Confidence 22333322211 2211 01 23333343444444443333322 555432211 1111122223
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.-..+|.+++..+++++.+ .+-...|++..++.++..++.+
T Consensus 145 ~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 145 MWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHH
Confidence 3477888888888888876 4445667765544333333333
No 206
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.23 E-value=7.2e-05 Score=72.83 Aligned_cols=112 Identities=14% Similarity=0.074 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
..+++-+++-...+.+++|+++ .|++..+.+.+.++......+.|++.|+++||+..++|.+.+..++..+...+....
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445554555788899985 689999999999999999999999999999997556777766555554443332221
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064 103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD 154 (346)
Q Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~ 154 (346)
. +.+.++..+.+..+......|...+..-+...
T Consensus 89 ~-------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 89 S-------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred c-------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 1 24445555666666666666655555544444
No 207
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.14 E-value=4.5e-05 Score=75.06 Aligned_cols=156 Identities=17% Similarity=0.136 Sum_probs=109.9
Q ss_pred HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc--cc--chhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY--LS--RFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~--lG--R~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
....|+++++|+++++......... .-...-++.|.++|.+ .| ||+=++++.++..++...+.+. |...
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~-lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~~~--- 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLAS-LPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PASE--- 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHh-CchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cccc---
Confidence 3456788899999988776555433 4445566789999997 24 5556666777776655555543 2211
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~ 192 (346)
.......+.+++..+|.+......-+...|...++... ++..-++.|....+|++++..+.+++.+.
T Consensus 84 ---------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l~~~ 150 (433)
T PF03092_consen 84 ---------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPLLDS 150 (433)
T ss_pred ---------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 12344556667788999988888888888887655422 46667788889999999999999999998
Q ss_pred cchhHHHHHHHHHHHHHHHH
Q 019064 193 QGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 193 ~g~~~~f~i~~~~~~~~~~i 212 (346)
.+++..|.+.+++..+..+.
T Consensus 151 ~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 151 FGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred CCCeEEehHHHHHHHHHHHH
Confidence 89998898876655544433
No 208
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.13 E-value=6.9e-05 Score=74.10 Aligned_cols=177 Identities=19% Similarity=0.085 Sum_probs=121.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhH---HHHHHHcccccCCchhHHH-HHHHHH----HHHHHHHHHHHHHHhhhcccchhHHH
Q 019064 15 RACTFVFVLSALENMGFIANG---ISMVLYFKNEMHFDIAGAS-NTLTNF----FGSTFLLCLVGGFISDTYLSRFATCL 86 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~---~~l~~yl~~~lg~s~~~a~-~~~~~~----~~~~~~~~llgG~laD~~lGR~~~i~ 86 (346)
....-+....+.+.++++... .+...+.....+.+..... ...... .....+..++-|.++|+| |||..+.
T Consensus 18 ~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~ 96 (463)
T KOG2816|consen 18 ASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLL 96 (463)
T ss_pred chhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHH
Confidence 344556666777777776666 5555666555554433332 222222 356777888899999997 9999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
+..+...++.+.+.+.. +++++ +.-..-|.+.+.+...++++|...+++ |..
T Consensus 97 ~~~~~~~l~~~~~~~~~---------------------~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~------R~~ 148 (463)
T KOG2816|consen 97 LPLFGTILPALCLLFQG---------------------YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEE------RSS 148 (463)
T ss_pred HHHHHHHHhHHHHHHHH---------------------HHHhh-hcccccchhhhhhhhhhheeeccchhH------HHH
Confidence 88888877766655532 22322 222333444566777788888887543 566
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064 167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFY 220 (346)
Q Consensus 167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~ 220 (346)
.+...+-+...+..+++..++++.+..|....|.+.++..+++.+...+..+.-
T Consensus 149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 677777777788888999999999999999999999888887777666655543
No 209
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.11 E-value=0.00022 Score=69.59 Aligned_cols=168 Identities=11% Similarity=0.035 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
|.++...+...+....+++....+|.|+++.+|++..+.+.......+...++..+.+.+.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4456566666677777777778889999999999999998887666666666666666555443 444554444445555
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
|.+++.+..... .......++++.+.++|.+...|+.....-.+.+... + ..++.+ ...
T Consensus 297 g~~l~~~~~~~~--------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~-G---~a~a~~---~~~ 355 (413)
T PRK15403 297 GLALLIVGNLLW--------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPK-G---TVSASL---NMV 355 (413)
T ss_pred HHHHHHHHHHHc--------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCC-c---HHHHHH---HHH
Confidence 655544332100 0123345678888899999998888864434433221 1 123333 333
Q ss_pred HHHHHHHHHhhhhhhhhccchhHHHHHHHHH
Q 019064 175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~ 205 (346)
...+..++..+.+++.++ +-.++|....++
T Consensus 356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 444455566666676554 445566544433
No 210
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.02 E-value=8.1e-05 Score=73.30 Aligned_cols=184 Identities=14% Similarity=0.081 Sum_probs=128.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-hhHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLV 87 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR-~~~i~~ 87 (346)
++-+||.+++.+++.+...+.++-....+=.|+++ +.+-+..-.++++.....+..+..++.|+...|. |+ |+-++.
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~ 107 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIV 107 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHH
Confidence 45789999999999999999888888888888875 4667777788999999999999999999999996 74 667778
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064 88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY 167 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~ 167 (346)
++++..+|.++....+..|. ...+++++++++.|+|.|.. +..-++.+|--..+| |.+.
T Consensus 108 s~ii~~~g~llY~~l~~~~~--------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R~rA 166 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPN--------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------RPRA 166 (488)
T ss_pred HHHHHHHHHHHHHHHHhccc--------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------hHHH
Confidence 99999999988844444443 15688899999999997654 667788888655444 3333
Q ss_pred HHHH----HHHHHHHHHHHHhhhhhhhhcc---------chhHHHHHHHHHHHHHHHHHHh
Q 019064 168 FNFY----LFATTLAAMIGVTAIVYVFIDQ---------GWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 168 f~~~----y~~~niG~~i~~~~~~~i~~~~---------g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+... -.+..+|..+++..++..++.+ -+..+-++.+++.++.++++.+
T Consensus 167 ~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 167 FAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 4333 3344455555554555444321 1333444455555555544443
No 211
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.00 E-value=0.0001 Score=75.69 Aligned_cols=201 Identities=13% Similarity=0.158 Sum_probs=145.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
...+.+..++....+....+.+......+-+.+.++++..+.+.+...+-+...++.++..+.+-|. =|-|.|-+++++
T Consensus 93 ~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~ 171 (735)
T KOG3626|consen 93 ANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVL 171 (735)
T ss_pred cCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhH
Confidence 3456666666666666666668888888999999999999999999999999999999999999984 677788889999
Q ss_pred HHHHHHHHHhhhccCC-------------CCC-------------CCCCC--CCCC--C--ch-hHHHHHHHHHHHHHhc
Q 019064 92 EVLSLVMLTIQAYSKS-------------LHP-------------PDCGK--SSCL--K--GA-IAAYFYGSLYLYSLGC 138 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~-------------~~~-------------~~~~~--~~~~--~--~~-~~~~~~~~l~l~~iG~ 138 (346)
..+|.+++++-.++.. -.+ ..|.. ++|. . +. -..+++++.++.|+|.
T Consensus 172 m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~ 251 (735)
T KOG3626|consen 172 MGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA 251 (735)
T ss_pred HHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC
Confidence 9999888876321100 001 11111 1232 1 11 3347888999999999
Q ss_pred cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc------------------c-chhHHH
Q 019064 139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID------------------Q-GWWLGF 199 (346)
Q Consensus 139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~------------------~-g~~~~f 199 (346)
-.+.+.-.+++=|...+++ -..+++..|...-+|.++|.+++++..+- + -||.+|
T Consensus 252 Tpi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGF 325 (735)
T KOG3626|consen 252 TPIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGF 325 (735)
T ss_pred CCCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHH
Confidence 8888888887766665443 35678888888899999998888765321 1 399999
Q ss_pred HHHHHHHHHHHHHHHhcCcc
Q 019064 200 LISSVATLIGLIALAIGKPF 219 (346)
Q Consensus 200 ~i~~~~~~~~~~i~~~~~~~ 219 (346)
++++.+.+++.+.++...+.
T Consensus 326 Li~g~~~~~~a~p~f~fPk~ 345 (735)
T KOG3626|consen 326 LICGALLLFSAVPLFFFPKE 345 (735)
T ss_pred HHHHHHHHHHHHHHHhCccc
Confidence 99998887777766654443
No 212
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.98 E-value=0.00044 Score=62.78 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=77.7
Q ss_pred HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064 37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS 116 (346)
Q Consensus 37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~ 116 (346)
....-+++.+|+++.|.+.+...-..+.+++ ++.|.+.|++ |.+.++.++.+...+|+.++.+... ....
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~-~~i~------- 92 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS-GRIP------- 92 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-CccC-------
Confidence 3445677899999999999988888888875 7889999996 9999999999999999999988642 1111
Q ss_pred CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC
Q 019064 117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN 156 (346)
Q Consensus 117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~ 156 (346)
+...+.+.+...+.+.|.+.+......-..+.||++
T Consensus 93 ----~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~ 128 (250)
T PF06813_consen 93 ----SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS 128 (250)
T ss_pred ----ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc
Confidence 124555555555666666555555445556888853
No 213
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.96 E-value=0.00061 Score=66.37 Aligned_cols=179 Identities=13% Similarity=0.021 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
+...++..++...+.-....+...|+++.-|.+....+...+.-.+.=...-.+.+++-.|+ |-++++.++++.+.+=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33344444555555555557778898864446666666554444444445555678888885 99999999998888866
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HH
Q 019064 97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-AT 175 (346)
Q Consensus 97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~ 175 (346)
.+....+. |. ........++..+-|+..|........++.+..|++. +.+.-+.+.. ..
T Consensus 288 ~l~a~~~~-~~-------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~ 347 (400)
T PF03825_consen 288 LLYAYFSD-PW-------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSF 347 (400)
T ss_pred HHHHHhcC-Cc-------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHh
Confidence 56555420 10 0112233444556899999999999999999998655 3344444333 35
Q ss_pred HHHHHHHHhhhhhhhhccc------hhHHHHHHHHHHHHHHHHHHhc
Q 019064 176 TLAAMIGVTAIVYVFIDQG------WWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g------~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
.+|..+|..+++++.+++| |...+.+++++.++..+++++.
T Consensus 348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999999998765 4445566666666666666554
No 214
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.95 E-value=0.00054 Score=65.83 Aligned_cols=164 Identities=16% Similarity=0.161 Sum_probs=121.3
Q ss_pred HHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCC
Q 019064 28 NMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKS 107 (346)
Q Consensus 28 ~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~ 107 (346)
.++|+.==..|=+|--+.+|++..+.+.....|.+...++-.+.|++..+..+++++..+++.+..+++.++.+++..
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~-- 298 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL-- 298 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 334433333344555567899999999999999999999999999999988899999999999999998888887632
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064 108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 187 (346)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~ 187 (346)
.+.+.|..+++++|+|.|.+.....+...|...++. .+.+...|-.+..++..++..+++
T Consensus 299 --------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 299 --------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred --------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 246789999999999999988888888888887554 245566665555555555555554
Q ss_pred hhhh----------ccchhHHHHHHHHHHHHHHHHH
Q 019064 188 YVFI----------DQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 188 ~i~~----------~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
-+.| ..+|...|.+-++.+++++.+.
T Consensus 359 ~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 359 ALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 4433 2357777887777777666554
No 215
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.93 E-value=6.9e-05 Score=74.64 Aligned_cols=86 Identities=15% Similarity=0.105 Sum_probs=70.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCLVFGTL 91 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i~~~~~l 91 (346)
+.+|...+..++.....|++..+++.|+++..|++..++..+...+.+...++.++.|+++||. ..++..+..+..+
T Consensus 273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4568888899999999999999999999997789999999999999999999999999999993 3556555555555
Q ss_pred HH-HHHHHHH
Q 019064 92 EV-LSLVMLT 100 (346)
Q Consensus 92 ~~-~G~~ll~ 100 (346)
+. +|.+.+.
T Consensus 353 ~~~~g~~~l~ 362 (495)
T KOG2533|consen 353 YAIIGAISLL 362 (495)
T ss_pred HHHHHHHHHH
Confidence 43 4544444
No 216
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.92 E-value=0.00033 Score=67.78 Aligned_cols=134 Identities=10% Similarity=-0.009 Sum_probs=86.5
Q ss_pred HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064 38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS 117 (346)
Q Consensus 38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~ 117 (346)
..+|.++.+| +...+.+...+|+..+......+-|+.|++ |=|.+.++++++..+|..+=.++. .|...+
T Consensus 67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~------- 136 (480)
T KOG2563|consen 67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP------- 136 (480)
T ss_pred HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc-------
Confidence 4455556667 666677888889999999999999999996 999999999999999988777654 354322
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064 118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (346)
Q Consensus 118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~ 190 (346)
.....+.+.|-.+.+..+-.+...-+-..+-.|++++ |...-..-.++..+|.+++.++.+.+.
T Consensus 137 ---~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV 200 (480)
T KOG2563|consen 137 ---LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILV 200 (480)
T ss_pred ---cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceec
Confidence 1111355566666666655444333333445566443 333333333455566666665555543
No 217
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.92 E-value=0.00015 Score=72.50 Aligned_cols=178 Identities=11% Similarity=-0.026 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchh----HHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-------HHHHHHHHH
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIA----GASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------TCLVFGTLE 92 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~----~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-------~i~~~~~l~ 92 (346)
...-...|......++.|.++..+.+.. .++.+.+.......+..++.|++.||+ |||+ -+.++.++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 4444555666667788888753332211 122333333344545666678999995 8886 367788887
Q ss_pred HHHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 93 VLSLVMLTIQAY-SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 93 ~~G~~ll~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
.+|++.+.+... ..... ...+.+++....++.++|++...|...++..+..|++. ++.....+
T Consensus 357 ~~~~~~~~~~~~~~~~~~----------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~~ 420 (489)
T PRK10207 357 SLGFLTAAAAGMWFADAQ----------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHhhcCCC----------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHHH
Confidence 777765543211 11100 12345667788889999999999999999999887433 56677778
Q ss_pred HHHHHHHHHHHHhhhhhhhh----------ccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 172 LFATTLAAMIGVTAIVYVFI----------DQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~----------~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
+...++|..++..+..+... .-.+.+.|...++..++..++++...+
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999988777654421 112445566555554444444444333
No 218
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.00034 Score=66.24 Aligned_cols=171 Identities=12% Similarity=0.035 Sum_probs=101.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccc--cCCc---------------hhHHHHH--HHHHHHHHHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNE--MHFD---------------IAGASNT--LTNFFGSTFLLCLVGGFI 74 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~--lg~s---------------~~~a~~~--~~~~~~~~~~~~llgG~l 74 (346)
+|....+...-+..+++|||+.-...-..+.. .|.. ...+... +..-+..-+-+.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 45666677778889999999865444333321 1111 1111111 122344566688999999
Q ss_pred hhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064 75 SDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD 154 (346)
Q Consensus 75 aD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~ 154 (346)
.|| +|||+|+..+.+++.+-.+++...-. +..-..+++.+++.+.. ..-+...|--|.||
T Consensus 405 ver-lGRKkTMal~l~~f~iflfll~~c~~---------------rn~~tvllf~arafisg----~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 405 VER-LGRKKTMALSLILFGIFLFLLTTCKT---------------RNAYTVLLFTARAFISG----AFQVAYVYTPEVYP 464 (528)
T ss_pred HHH-hcchhHHHHHHHHHHHHHHHHHHhcC---------------cchhHHHHHHHHHHHhc----hheEEEEecCcccc
Confidence 999 69999999988887776555543210 11233455566665544 44566778889998
Q ss_pred CCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 155 ENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 155 ~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
..- |....+.-.-...||++++|.++ +..+.+-..+..+..++.+++.+.
T Consensus 465 Tav------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 465 TAV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred hhh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHH
Confidence 644 34444444445789999999887 333333334444555544444443
No 219
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.90 E-value=1.9e-06 Score=86.87 Aligned_cols=191 Identities=14% Similarity=0.184 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064 19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM 98 (346)
Q Consensus 19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l 98 (346)
++++..+.+ ...+|......+-+.+.++++.++++.+.+.+.+...+..++..+.++|. -|-|-+-+++++..+|.++
T Consensus 7 ~~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence 344555556 77888888888889999999999999999999999999999999999984 6777777888899999888
Q ss_pred HHhhhccCCC---------------CCCCCC--------C--CCCC---C---chhHHHHHHHHHHHHHhccccccchhh
Q 019064 99 LTIQAYSKSL---------------HPPDCG--------K--SSCL---K---GAIAAYFYGSLYLYSLGCGGNRGTLPA 147 (346)
Q Consensus 99 l~l~~~~p~~---------------~~~~~~--------~--~~~~---~---~~~~~~~~~~l~l~~iG~g~~~~~~~a 147 (346)
+++-.++..- ....|. . ..|. . ..-..+|+++.++.|+|.....+.-.+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 8863321110 011230 0 0011 1 123467888999999999988888888
Q ss_pred hccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc---------------------cc-hhHHHHHHHHH
Q 019064 148 LGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID---------------------QG-WWLGFLISSVA 205 (346)
Q Consensus 148 ~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~---------------------~g-~~~~f~i~~~~ 205 (346)
|+=|..++++ -.-+.+.+|....+|.++|..+++..-+. +| ||++|.+.+++
T Consensus 165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 8877776544 35677778888888998888777654210 23 99999998887
Q ss_pred HHHHHHHHHhcC
Q 019064 206 TLIGLIALAIGK 217 (346)
Q Consensus 206 ~~~~~~i~~~~~ 217 (346)
.++..+.++...
T Consensus 239 ~~l~aipl~~FP 250 (539)
T PF03137_consen 239 LFLSAIPLFFFP 250 (539)
T ss_dssp ------------
T ss_pred HHHHHHHHHcCC
Confidence 766555554433
No 220
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.89 E-value=0.00013 Score=53.74 Aligned_cols=66 Identities=14% Similarity=0.033 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.++...+.-.+.++++.|++ +.|++..+.+.+..+......+++++.|+++||+ ||++.++....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 33444445556678888887 4899999999999999999999999999999996 988888766554
No 221
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.84 E-value=0.00079 Score=60.29 Aligned_cols=147 Identities=20% Similarity=0.203 Sum_probs=98.3
Q ss_pred HHHHHHcccccCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~ 113 (346)
..++.+.. .++.+. ...+.....+.....+..++.|.++|++ |||+.+..+.....++.++..+.. .
T Consensus 23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~---~------ 91 (338)
T COG0477 23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP---N------ 91 (338)
T ss_pred HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc---c------
Confidence 34444443 344443 4677788888888888889999999997 999888877766555533433322 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHHhhhhhhhh-
Q 019064 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVFI- 191 (346)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~niG~~i~~~~~~~i~~- 191 (346)
.....+.+.+.+.+++.+...+...++..|.+++ . ..+....+.... ...+|..+++.+.+.+..
T Consensus 92 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 92 --------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred --------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1356677777778999999999999999999886 2 124555555555 466677777655555443
Q ss_pred -ccchhHHHHHHHHHH
Q 019064 192 -DQGWWLGFLISSVAT 206 (346)
Q Consensus 192 -~~g~~~~f~i~~~~~ 206 (346)
..+|+..|.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 159 LLWGWRAAFLLAALLG 174 (338)
T ss_pred HhcchHHHHHHHHHHH
Confidence 357888666554433
No 222
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.76 E-value=0.00066 Score=65.91 Aligned_cols=174 Identities=11% Similarity=0.040 Sum_probs=120.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccC---CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg---~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+-|.+|.+.+........|+..-...+.|.+..++ .++...+.+.+.-.+.=.+.-.+..++-+|+ |.|+.++++.
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag 296 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG 296 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence 45677777776666666676666667888875443 3333344555555555566666778999995 9999999998
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
.+..+=.+...++. +.+.+.+.-.+-++-.+..-....-|+++++|++- ..+.+.
T Consensus 297 ~i~~iRi~~~~~~~-------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~ 351 (412)
T PF01306_consen 297 VIMAIRIIGSGFAT-------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYL 351 (412)
T ss_dssp HHHHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHH
T ss_pred HHHHHHHHHHhhhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHH
Confidence 88777555544432 45667777778888888888888899999999532 233444
Q ss_pred H-HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 170 F-YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 170 ~-~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
. +.++..+|..+-+.+.+++.|+.|++..|.+.+.+.+...++
T Consensus 352 v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li 395 (412)
T PF01306_consen 352 VGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLI 395 (412)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHH
Confidence 4 345778888888899999999999999998766655544443
No 223
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.75 E-value=0.0037 Score=59.42 Aligned_cols=184 Identities=12% Similarity=0.063 Sum_probs=109.2
Q ss_pred HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK 115 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~ 115 (346)
..+..-+...-|.+..++..+.........++.-..|.++|++ ||+|...+..+...+ ..+.+ ..
T Consensus 98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v----~~~is---~~------- 162 (528)
T KOG0253|consen 98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGV----FGVIS---GA------- 162 (528)
T ss_pred HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHH----HHHhh---cC-------
Confidence 3333444445678888888888877778888899999999996 999977655444333 22221 11
Q ss_pred CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064 116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW 195 (346)
Q Consensus 116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~ 195 (346)
+.+...+.+-.+++++|.|+ .|...+.-.+-.|..+.. ...... ++ ..+|.++...+.=.+..+.||
T Consensus 163 -----spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~----~~~V~~-~~--waig~v~ea~law~vm~~~gw 229 (528)
T KOG0253|consen 163 -----SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRW----LLTVMS-FF--WAIGQVFEALLAWGVMSNFGW 229 (528)
T ss_pred -----CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCC----cchhHH-HH--HHHHHHHHHHHHHHHHHhhhH
Confidence 22456778888999999999 788888888887765421 122222 22 345666665554444566799
Q ss_pred hHHHHHHH-HHHHHHHHHHHh-cCccceecCCCCCcchhHHHHHHHHHHhccCCCCC
Q 019064 196 WLGFLISS-VATLIGLIALAI-GKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250 (346)
Q Consensus 196 ~~~f~i~~-~~~~~~~~i~~~-~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~ 250 (346)
++-..... -+++.+...++. -.++|. --+|++-+. ...+....|-.+.+.|.
T Consensus 230 r~~l~~~~~pl~~~a~f~~w~~ESpRf~--~~~G~~~kA-letL~kiArmNg~qlpl 283 (528)
T KOG0253|consen 230 RYLLFTSSTPLMFAARFLVWVYESPRFY--LAKGDDYKA-LETLHKIARMNGKQLPL 283 (528)
T ss_pred HHHHHHHHhHHHHHHHHHhhcccCcchh--hhcCChHHH-HHHHHHHHHhcCCCCCc
Confidence 88654433 344444444432 223332 234555433 33343444444445554
No 224
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.74 E-value=0.00085 Score=67.28 Aligned_cols=173 Identities=13% Similarity=-0.013 Sum_probs=106.9
Q ss_pred HHHHHHHHHhHHHHHHHccc----c-----cCCchhHHHHHHHHHHHHHHHHHHHH----HHHhhhcccchhHHHHHHHH
Q 019064 25 ALENMGFIANGISMVLYFKN----E-----MHFDIAGASNTLTNFFGSTFLLCLVG----GFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 25 ~~e~~a~ygv~~~l~~yl~~----~-----lg~s~~~a~~~~~~~~~~~~~~~llg----G~laD~~lGR~~~i~~~~~l 91 (346)
++....||.+...++.+++. . .|+.. ..+...+.-.+...+..++. +.+.||+ +..+.+.++.++
T Consensus 282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i-~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAV-EPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhccccccceEE-CHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 35556677776766666542 1 12211 12333333333444444555 5555553 566778888999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
..+|++++.+....+.- + ...+.+++.....+.++|++...|...++..+..|++. |+..++.+
T Consensus 360 ~~l~f~~l~~~~~~~~~----~------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g~~ 423 (500)
T PRK09584 360 CSGAFLVLPLGAKFAND----A------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHhcCC----C------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHHHH
Confidence 99998887765421110 0 12345678888999999999999999999999988433 67888888
Q ss_pred HHHHHHHHHHHHhhhhhhhh----------ccchhHHHHHHHHHHHHHHHHHHh
Q 019064 172 LFATTLAAMIGVTAIVYVFI----------DQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~----------~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+.+..+|+.++..+..+... ..++...|...++..++..++++.
T Consensus 424 ~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 424 FLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 87877888877666543221 123566776666554444444433
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.0021 Score=61.55 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=106.3
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
.+..+++.|+.+..|.+..+++..++.+.+...++-.+|-++-.|+ ...|.+.+.+++..+-.+...+. +
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~---~------ 323 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALI---G------ 323 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHh---c------
Confidence 4557899999988999999999999999999999998888888875 77776665544433322222222 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~ 192 (346)
+ ..-..++.++|+..+.+.|++.+...+.++++++. ++.+ -....+|+++-|.+.+++.|.
T Consensus 324 ----------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~-----~s~~---l~maivGGAiiP~l~G~i~d~ 384 (422)
T COG0738 324 ----------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSV-----GSGL---LVMAIVGGAIIPPLQGVIADM 384 (422)
T ss_pred ----------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccc-----ccee---eeeheecchHHHHHHHHHHHh
Confidence 1 23455677899999999999999999999965532 2222 224667888889999999999
Q ss_pred cchhHHHH-HHHHHHH
Q 019064 193 QGWWLGFL-ISSVATL 207 (346)
Q Consensus 193 ~g~~~~f~-i~~~~~~ 207 (346)
+|-...+. +|..+.+
T Consensus 385 ~g~~~~~~~~pllc~l 400 (422)
T COG0738 385 FGIQLTFLIVPLLCYL 400 (422)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 98877766 4544443
No 226
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.55 E-value=0.00035 Score=69.44 Aligned_cols=135 Identities=12% Similarity=-0.115 Sum_probs=99.0
Q ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc-
Q 019064 43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG- 121 (346)
Q Consensus 43 ~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~- 121 (346)
++.+|+++...+.+.....+...++..+.+.+.+++ +.++++.++.++..++.....+........ .+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------~gi 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------FGI 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc----------cCC
Confidence 457899999999999888888888888888888874 999999999888888765432211000000 00
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g 194 (346)
...+.......+.+++.+........+..+..+++. .++.+..+....|+|..+++.+++++.+..|
T Consensus 349 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 349 SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 012233444556777777777888888999888655 4778888888899999999999999988776
No 227
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.39 E-value=0.0068 Score=58.38 Aligned_cols=138 Identities=14% Similarity=-0.043 Sum_probs=87.3
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----ch-hHHHHHHHHHHHHHHHHHhhhccCCC-CCCCCCCC
Q 019064 44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RF-ATCLVFGTLEVLSLVMLTIQAYSKSL-HPPDCGKS 116 (346)
Q Consensus 44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lG-----R~-~~i~~~~~l~~~G~~ll~l~~~~p~~-~~~~~~~~ 116 (346)
.+++.+..-.+..+..-... ....+..|+.||++ + || +=|..+..+...|..+.......-.. ...
T Consensus 8 vEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~----- 80 (403)
T PF03209_consen 8 VELGVPAWLVALLVALHYLV-APLRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ----- 80 (403)
T ss_pred HHhccHHHHHHHHHHHHHHH-HHHHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccc-----
Confidence 35667655555555544433 34567889999996 4 33 33555666666666555543211110 000
Q ss_pred CCCC-chhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064 117 SCLK-GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG 194 (346)
Q Consensus 117 ~~~~-~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g 194 (346)
...+ ........++..++|+|.+....+..++.+|..+|++ |.+.....|...-+|.+++.++.+.+-+.++
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 0001 1122344555667888888899999999999998754 6777778888888999999888887766655
No 228
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.38 E-value=0.00028 Score=67.34 Aligned_cols=167 Identities=17% Similarity=0.051 Sum_probs=107.2
Q ss_pred hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064 34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (346)
Q Consensus 34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~ 113 (346)
+-+.++++..+.+..+.-+.+.......+...++..+.|.++||+ +.-+-.....-+..+|.....+ |. |
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~i----P~-----~ 358 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPI----PF-----A 358 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchh----Hh-----h
Confidence 445667777777775554677776667778888999999999997 8333222223333344222111 22 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019064 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ 193 (346)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~ 193 (346)
++...+.+-...++++.+.+.+...+..+...+.+..++-..-++.+...-.+..+|.++||++++.+.+..
T Consensus 359 --------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 359 --------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred --------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 134445566666777777777777777777776544321112356666677788899999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 194 GWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 194 g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
|+.|.-.+.++...+...++...+.
T Consensus 431 GF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 431 GFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998876666665555554444443
No 229
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.37 E-value=8.8e-06 Score=74.18 Aligned_cols=157 Identities=13% Similarity=0.210 Sum_probs=117.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
..+..+.++..+...+.|= --..+.+++...++.+.++.+++.++++--..+.+.+|||+.||.+|-|+.-++.+.+..
T Consensus 43 ~m~lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~ 121 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF 121 (459)
T ss_pred HHHHHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence 3455566666665555553 224567888888888888888999999888899999999999999998777667777778
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
+|.++++.... .+..|....++++.|+|.-..-.....+....|..++ ..-.|+..-.
T Consensus 122 ~GqliFa~Ggi----------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlS 179 (459)
T KOG4686|consen 122 LGQLIFAAGGI----------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLS 179 (459)
T ss_pred HHHHHHHhchH----------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHH
Confidence 89888876432 2367889999999999987777777778888887654 5666776666
Q ss_pred HHHHHHHHHHhhhhhhhhcc
Q 019064 174 ATTLAAMIGVTAIVYVFIDQ 193 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~ 193 (346)
...+|+..-..+.+++.++.
T Consensus 180 vAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 180 VARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred HHHhhceeeeeecHHHHHHH
Confidence 66777776666677776653
No 230
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.36 E-value=0.014 Score=58.11 Aligned_cols=170 Identities=14% Similarity=0.006 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH-HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH-
Q 019064 55 NTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV-FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLY- 132 (346)
Q Consensus 55 ~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~-~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~- 132 (346)
...++......+..|+-|-+||.- |+||.++. +..+..+...++.... |+ +. .+...++
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~~---------------~~-~~~~~l~i 134 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--PG---------------QW-WLALVLFI 134 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--cc---------------hH-HHHHHHHH
Confidence 344555667777888889999975 76665544 4555555555555432 21 22 2222233
Q ss_pred HHHHhccccccchhhhccCCCCCCChhhhh---------------------hhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064 133 LYSLGCGGNRGTLPALGAGQFDENDPKGAK---------------------ALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 133 l~~iG~g~~~~~~~a~~adq~~~~~~~~~~---------------------~~~~~f~~~y~~~niG~~i~~~~~~~i~~ 191 (346)
+-.++.++......++.-|..++++. .+. .+++.-++-+...++|+++...+.-.+..
T Consensus 135 ia~v~~~~~~vfyna~LP~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~ 213 (477)
T PF11700_consen 135 IANVGYEASNVFYNAYLPDLARPEPR-VRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVI 213 (477)
T ss_pred HHHHHHHHHHHHHHHHhHhhcCCChh-hhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33356666667777777777665432 000 11556666666788888887665433321
Q ss_pred --------ccchhHHHHHHHHHH-HHHHHHHHhcCccce-ecCCC-CCcchhHHHHHHHHHHhc
Q 019064 192 --------DQGWWLGFLISSVAT-LIGLIALAIGKPFYR-IQQPG-ESPLVRVAQVIVVAIKNR 244 (346)
Q Consensus 192 --------~~g~~~~f~i~~~~~-~~~~~i~~~~~~~~~-~~~p~-gs~l~~i~~v~~~a~~~~ 244 (346)
..+.+..+.+.++-. ++++..+...+++.+ +..|. .+.++.-++-++..+|+.
T Consensus 214 ~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~ 277 (477)
T PF11700_consen 214 SPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEI 277 (477)
T ss_pred cCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 123466676666543 344445555554433 22232 334455555555566553
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.36 E-value=1.8e-06 Score=84.76 Aligned_cols=181 Identities=15% Similarity=0.036 Sum_probs=104.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV 93 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~ 93 (346)
++.....+....+..+..+....+...++.+..+.+.. -...........++.+++.++.||+ |||+.++++..+..
T Consensus 251 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~ 327 (451)
T PF00083_consen 251 RKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMA 327 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccc
Confidence 34555555555556555555555555556566677665 1222233455666777888999995 99999998888877
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLY-SLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
+..+.+.... ......+ +..+.. ..+...+. .....+..+....+.+|.||.+. |....+..+
T Consensus 328 ~~~~~~~~~~-~~~~~~~--------~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~ 391 (451)
T PF00083_consen 328 ICSLILGIIF-FLGVSSS--------SWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSY 391 (451)
T ss_pred cccccccccc-ccccccc--------cccccc-cceeeeeccccccccccccccccccccccccc------ccccccccc
Confidence 7665554111 0111000 000111 11122222 22222445666688899999765 566677777
Q ss_pred HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL 213 (346)
Q Consensus 173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~ 213 (346)
...++++++++.+.+++.++.+-...|.+.++++++..++.
T Consensus 392 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 392 AVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred ccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence 77788888888888888877663445555555554444433
No 232
>PTZ00207 hypothetical protein; Provisional
Probab=97.33 E-value=0.001 Score=67.77 Aligned_cols=177 Identities=8% Similarity=-0.009 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHccccc-CCchhH--HHHHHHHHHHHHHHHHHHHHHHhhhcccchh-------H
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEM-HFDIAG--ASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------T 84 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l-g~s~~~--a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-------~ 84 (346)
..+|+++...+|---+-..+..|+- .+-+.+ |.+..+ ..+.++.+.+.++++-+.+|+++ .++-||+ +
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchh
Confidence 4578888888876655555556655 333456 663333 23367889999999999999999 3444444 2
Q ss_pred HH--HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064 85 CL--VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK 162 (346)
Q Consensus 85 i~--~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~ 162 (346)
+. +..+ ..++++++.+. +|. ..++++-+++|++.|...+...+...|.|. ++
T Consensus 431 ~~l~~~~~-~~~~~lll~~~--~p~-----------------~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~----- 484 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLT--LPK-----------------AALPLPYFIAAFANGFMAATIALVTRTIFA-KD----- 484 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHH--CCc-----------------cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc-----
Confidence 22 2333 55566666654 231 358899999999999999999999999999 66
Q ss_pred hhhhHHHHHHHHHHHHHHHH-Hhhhhhhhhc-------------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064 163 ALASYFNFYLFATTLAAMIG-VTAIVYVFID-------------QGWWLGFLISSVATLIGLIALAIGKPFY 220 (346)
Q Consensus 163 ~~~~~f~~~y~~~niG~~i~-~~~~~~i~~~-------------~g~~~~f~i~~~~~~~~~~i~~~~~~~~ 220 (346)
-+..+|.-+.+.-+|+.+- ..+.+++.|. ..++..|++.+++.+++.++-....-+|
T Consensus 485 -~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 485 -PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred -hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 4678888888888887764 3455665432 2488999988877777766654443333
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.26 E-value=0.01 Score=59.12 Aligned_cols=202 Identities=9% Similarity=-0.060 Sum_probs=127.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchh------HH---H-HHHHHHHHHHHHHHHHHHHHhhhccc
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIA------GA---S-NTLTNFFGSTFLLCLVGGFISDTYLS 80 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~------~a---~-~~~~~~~~~~~~~~llgG~laD~~lG 80 (346)
.-||..+.++.++++.-++++....+...|+.+ .++-++. ++ + +....+...+.+..++--++.+++ |
T Consensus 255 ~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~-g 333 (477)
T TIGR01301 255 YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW-G 333 (477)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 457899999999999999999888888888764 3442211 11 2 223334445456566667788885 8
Q ss_pred c-hhHHHHHHHHHHHHHHHHHhhhccCC-CCCCCCCCCCC-CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCC
Q 019064 81 R-FATCLVFGTLEVLSLVMLTIQAYSKS-LHPPDCGKSSC-LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND 157 (346)
Q Consensus 81 R-~~~i~~~~~l~~~G~~ll~l~~~~p~-~~~~~~~~~~~-~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~ 157 (346)
+ |++-.++.++..+++....+....+. ..+.+.....- ++....+..++...++|+..+.....-.+++++..++++
T Consensus 334 ~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 334 AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 5 66667887888888777665432111 00000000000 011123556666778899999888888899998888543
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc--hhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 158 PKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 158 ~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g--~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
.+ .+...+.++.++.+.-++..+..+.+.+-.| -...+.+.++.++++.+..+...|
T Consensus 414 ~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 414 AG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred CC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 22 4677778888888888877766665544333 455777788877777766554444
No 234
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.96 E-value=0.0016 Score=63.34 Aligned_cols=166 Identities=16% Similarity=0.089 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHHH-HHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCL-VFGT 90 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i~-~~~~ 90 (346)
+....+..+.+.-.+++-.=.+.+++|++ .+|.+..-.+.+-.+--+...+.+|+.|..+||+ +||||-.+ .+..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 55555666666667777655677888886 5888887777777777778899999999999986 58766554 4555
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064 91 LEVLSLVMLTIQAYSKSLHPPDCGKS-SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN 169 (346)
Q Consensus 91 l~~~G~~ll~l~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~ 169 (346)
...+++.++..+ +++...-|++. .|........++++..+.=+..-..+...-++.+|...+++.+ ++..+
T Consensus 111 ~i~~~l~Lig~a---aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~-----~~Ans 182 (498)
T KOG0637|consen 111 LIAVSLFLIGYA---ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKK-----TRANS 182 (498)
T ss_pred HHHHHHhhhhhH---hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhh-----hccch
Confidence 566676655544 23322223322 2334556778888888888888888899999999998866532 22667
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 019064 170 FYLFATTLAAMIGVTAIVYV 189 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i 189 (346)
++-+.+.+|..+|....+|.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 77778899999888777755
No 235
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.83 E-value=0.0046 Score=63.86 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhccc--chhHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLS--RFATCLVFGTL 91 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lG--R~~~i~~~~~l 91 (346)
+.++...+..+++..+++++..+++.|+++++|++..+++.+.....+ ...++.+++|+++||+ + .++.+.++.++
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL 408 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence 356777788899999999999999999999999999999998877665 5678899999999996 6 45666666666
Q ss_pred HHHHHHH
Q 019064 92 EVLSLVM 98 (346)
Q Consensus 92 ~~~G~~l 98 (346)
..++.++
T Consensus 409 ~~~~~~~ 415 (633)
T TIGR00805 409 STLSYLL 415 (633)
T ss_pred HHHHHHH
Confidence 6665444
No 236
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.72 E-value=0.052 Score=54.56 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=55.5
Q ss_pred CchHHHHHHHHHHHHHH-HHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064 13 GFRACTFVFVLSALENM-GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL 91 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~-a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l 91 (346)
.+|.....+....+..+ ++..+..+.+..+ +..|.+... ............++.+++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 44444444444444444 3344444444443 344555432 3333444556667777789999996 999999999999
Q ss_pred HHHHHHHHHhhh
Q 019064 92 EVLSLVMLTIQA 103 (346)
Q Consensus 92 ~~~G~~ll~l~~ 103 (346)
..++.+++....
T Consensus 369 m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 369 MSICLVILAVVG 380 (513)
T ss_pred HHHHHHHHHHHH
Confidence 999988888753
No 237
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.62 E-value=0.0043 Score=60.44 Aligned_cols=178 Identities=11% Similarity=0.037 Sum_probs=115.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHH--------HHHHHHHHHHH-HHHHHHHHhhhcccchhHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASN--------TLTNFFGSTFL-LCLVGGFISDTYLSRFATC 85 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~--------~~~~~~~~~~~-~~llgG~laD~~lGR~~~i 85 (346)
+...-.++.-|.-.++||+..-+...-++ .+|+.+.+... .......+.++ +..++.++.|+ +||++.-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence 55666677788889999998888777665 35554444333 12233334444 66778889998 5999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064 86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG-AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL 164 (346)
Q Consensus 86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~ 164 (346)
+-+.+++.+-...+... ..+. ++. .-....-+.. -++.-|...+.-..-+|.||.+- |
T Consensus 382 ~~GF~~~~i~~~~~~~~----y~~~--------~~~~Gf~v~y~l~~---ff~NFGPn~ttfivpaE~FParv------R 440 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGP----YNQL--------ENTIGFVVLYSLTF---FFGNFGPNATTFIVPAEIFPARV------R 440 (538)
T ss_pred HhhHHHHHHHHHHHcCC----cccc--------cccCceeehHHHHH---HHHhcCCCceeEEeehhhchHHH------h
Confidence 88888877755544432 2110 011 1111222222 23333444444555578898533 5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhh-----ccchhHHHHHHHHHHHHHHHHHHh
Q 019064 165 ASYFNFYLFATTLAAMIGVTAIVYVFI-----DQGWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 165 ~~~f~~~y~~~niG~~i~~~~~~~i~~-----~~g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
+......-.+.-+|++++.....++++ +.|.+..|.+.+.+++++.++.++
T Consensus 441 ~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 441 STCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred hhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 666666677788999999999999998 778999999999999888876654
No 238
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.58 E-value=0.0075 Score=56.55 Aligned_cols=85 Identities=12% Similarity=-0.012 Sum_probs=66.9
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc---------
Q 019064 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID--------- 192 (346)
Q Consensus 122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~--------- 192 (346)
.+.+.+.+++++++.|.+...+...++++|.-++++ +.+..|+......+|+.++|.+.+.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 467889999999999999999999999999987654 45677888888999999999998866521
Q ss_pred -------cchhHHHHHHHHHHHHHHHH
Q 019064 193 -------QGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 193 -------~g~~~~f~i~~~~~~~~~~i 212 (346)
..|++.|.+.+++.++..++
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36888988655544433333
No 239
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.0025 Score=58.07 Aligned_cols=156 Identities=17% Similarity=0.148 Sum_probs=91.7
Q ss_pred HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064 38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS 117 (346)
Q Consensus 38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~ 117 (346)
.+.|+-+.+|+...+.+.+.-+-.+...+...+.|-++|+. |||+.-+ .|.+-+++..++-+.|
T Consensus 59 YvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracv----tycitYiLsCiTKhSp----------- 122 (454)
T KOG4332|consen 59 YVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACV----TYCITYILSCITKHSP----------- 122 (454)
T ss_pred eeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-cccccee----eehHHHHHHHHhhcCC-----------
Confidence 34566667888888888777666667777778889999985 9999654 4444445545543222
Q ss_pred CCCchhHHHHHHHHHHHHHhccccccchhh-hccCCCCCCChhhhhhhhhHHH-HHHHHHHHHHHHHHhhhhhhhhcc--
Q 019064 118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPA-LGAGQFDENDPKGAKALASYFN-FYLFATTLAAMIGVTAIVYVFIDQ-- 193 (346)
Q Consensus 118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a-~~adq~~~~~~~~~~~~~~~f~-~~y~~~niG~~i~~~~~~~i~~~~-- 193 (346)
+.-.+++++.+-|+.++...+..-+ +++|.-+.++-++ +-.+.-|+ ..++...+-++++...+-++.+..
T Consensus 123 -----qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Feq-qWls~TFskA~ffgNglvAiiaGlfgn~lvd~~sl 196 (454)
T KOG4332|consen 123 -----QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQ-QWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSL 196 (454)
T ss_pred -----ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChH-hhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhcc
Confidence 4556788999988888876655444 3455544433221 11222222 222334445555555555565553
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 019064 194 GWWLGFLISSVATLIGLIALAI 215 (346)
Q Consensus 194 g~~~~f~i~~~~~~~~~~i~~~ 215 (346)
|--.+|-..+...+++..+.+-
T Consensus 197 GPVAPFdAAacfLaigmAvil~ 218 (454)
T KOG4332|consen 197 GPVAPFDAAACFLAIGMAVILS 218 (454)
T ss_pred CCCCchHHHHHHHHHHHHHHHh
Confidence 4455665555555555554443
No 240
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.44 E-value=0.058 Score=52.26 Aligned_cols=129 Identities=16% Similarity=0.035 Sum_probs=81.5
Q ss_pred hHHHHHHHcccccCC---chhHH----HHHHHHHHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHHHHHHHHHhhhcc
Q 019064 34 NGISMVLYFKNEMHF---DIAGA----SNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLVFGTLEVLSLVMLTIQAYS 105 (346)
Q Consensus 34 v~~~l~~yl~~~lg~---s~~~a----~~~~~~~~~~~~~~~llgG~laD~~lGR-~~~i~~~~~l~~~G~~ll~l~~~~ 105 (346)
+....++|+++..+- +..+. +...++......+..|+-|-++|.. |+ |+.+-++..+-.+.+.+++..
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i--- 109 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI--- 109 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh---
Confidence 345678898876554 43333 3334555666777788889999986 75 555555555555565555554
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064 106 KSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185 (346)
Q Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~ 185 (346)
|. +...+...+.+.+..++..+......++..|..++++- ++.-+.-|-..++|+.+..+.
T Consensus 110 ~~-------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~------~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 110 PP-------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNM------GRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred CC-------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcccc------CcccccccccccccchHHHHH
Confidence 32 22455555666678888888889999999888876542 223333344567777765444
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.43 E-value=0.06 Score=54.93 Aligned_cols=150 Identities=13% Similarity=0.030 Sum_probs=91.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh---HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH-HHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC-LVF 88 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i-~~~ 88 (346)
.+|.+...+++.+.+...||++....+....+.++-+.. ..+.....+.....++.++.|++.-+ ++|.|-. +++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~ 386 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFG 386 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHH
Confidence 356788888889999999999988888877776665543 45556666666677777788888876 5876554 456
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (346)
Q Consensus 89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f 168 (346)
+.+..++..++.... |.. .+. .+.-.++.++|.|+........ -|+.-.+. ......
T Consensus 387 ~~~~ta~~Gama~~~--~~n-------------~~~--~i~~~~l~g~giG~~~~~~~~~--~ql~~p~~----~ig~a~ 443 (599)
T PF06609_consen 387 SVLMTAFCGAMAAVR--PDN-------------KNA--AIAFLVLAGFGIGGILVPAIVI--AQLIVPDE----DIGTAT 443 (599)
T ss_pred HHHHHHHHHHHHHcc--CCC-------------cch--HHHHHHHHHHhHHHHHHHHHHe--eEeeeCch----HHHHHH
Confidence 656555544444332 221 112 2334556677777665444433 34332221 145555
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 019064 169 NFYLFATTLAAMIGVTAI 186 (346)
Q Consensus 169 ~~~y~~~niG~~i~~~~~ 186 (346)
...-....+|+.++..+-
T Consensus 444 gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 444 GLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHhhHHHHHHH
Confidence 555556677777776654
No 242
>PRK03612 spermidine synthase; Provisional
Probab=96.42 E-value=0.22 Score=50.24 Aligned_cols=134 Identities=16% Similarity=0.085 Sum_probs=72.3
Q ss_pred HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH-HHHHHHHhhhccCCCCCCCCC
Q 019064 36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV-LSLVMLTIQAYSKSLHPPDCG 114 (346)
Q Consensus 36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~-~G~~ll~l~~~~p~~~~~~~~ 114 (346)
..+.-.+...+|-+..+.+.++++|.++..++..++|+++++-..++-.+-+...+.. +...++.... +..
T Consensus 35 v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~--~~~------ 106 (521)
T PRK03612 35 LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAF--AFQ------ 106 (521)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH------
Confidence 3344444445788888889999999999999999888887553222222222221111 1111111111 100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064 115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (346)
Q Consensus 115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~ 190 (346)
......++...++.++-.|+..|.+..+..+...++ .++-.+..|....+|+++|.++.+++-
T Consensus 107 ------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 107 ------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 001122233344566777777777666654432211 123345567777888888877776653
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.40 E-value=0.071 Score=44.82 Aligned_cols=98 Identities=11% Similarity=0.054 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 019064 61 FGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGG 140 (346)
Q Consensus 61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~ 140 (346)
.+...+..++...+-++ +|.|++++++.+.+.+=..... .| +.+.++.+-.+.|+|.+.
T Consensus 47 Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~----~~----------------~~~~l~~~s~l~G~~~a~ 105 (156)
T PF05978_consen 47 YGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF----YP----------------NSYTLYPASALLGFGAAL 105 (156)
T ss_pred HHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH----hh----------------hHHHHHHHHHHHhhhhHH
Confidence 33444455556667777 5999999999988875332221 12 356788888899999999
Q ss_pred cccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064 141 NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185 (346)
Q Consensus 141 ~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~ 185 (346)
.......++.+..++++ +++..+.++-..+.+.++|..+
T Consensus 106 lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 106 LWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred hhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHH
Confidence 99999998887665332 3445555444555555555444
No 244
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.25 E-value=0.062 Score=52.45 Aligned_cols=181 Identities=17% Similarity=0.121 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-HHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEVLS 95 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-~i~~~~~l~~~G 95 (346)
+.++.++....-..||++...|-.-+. .-|++...++.+...-.+.+.++.++.|.++||. ..+| ++++......++
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVG 345 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHH
Confidence 344444444455556655555443332 4478888899998888999999999999999996 6555 445545555555
Q ss_pred H-HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCC-CCCCChhhhhhhhhHHHHHHH
Q 019064 96 L-VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQ-FDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 96 ~-~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq-~~~~~~~~~~~~~~~f~~~y~ 173 (346)
. .++.... .+ ...+.++....++|...-+..|.-.-++.|. ||..+ + .++.. ...
T Consensus 346 ~~~l~~~t~-~~---------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-~----tSsGl--l~~ 402 (480)
T KOG2563|consen 346 TLMLLTCTL-FL---------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-G----TSSGL--LNL 402 (480)
T ss_pred HHHHHHhhc-cC---------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-c----cccee--EEe
Confidence 3 2222221 11 1234556666677777777888777777766 45433 1 11111 111
Q ss_pred HHHHHHHHHHhhhhhhhhccc---hhHHH-HHHHHHHHHHHHHHHhcCcccee
Q 019064 174 ATTLAAMIGVTAIVYVFIDQG---WWLGF-LISSVATLIGLIALAIGKPFYRI 222 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g---~~~~f-~i~~~~~~~~~~i~~~~~~~~~~ 222 (346)
..++-+.+=..+.+...+..+ |..+. ...+....+...+..+.++.|++
T Consensus 403 ~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 403 SGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred ehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 223322222334444455444 44433 33334444455555555665543
No 245
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.12 E-value=0.061 Score=53.36 Aligned_cols=154 Identities=11% Similarity=0.048 Sum_probs=109.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHH-HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFI-ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF 88 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~y-gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~ 88 (346)
+.+..|..+.++.+.+.....-. +-..++..|+..+++++..+.+...+......++..++...+--+.+|-++++.+|
T Consensus 235 ~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lG 314 (463)
T KOG2816|consen 235 KVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLG 314 (463)
T ss_pred ccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHH
Confidence 34556666665555544333333 23336678889999999999999999999999999988874444446988899999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064 89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF 168 (346)
Q Consensus 89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f 168 (346)
++...++..++.+.. +.|..+.+..+ ....+...|...++..-+.+.++ .+..+
T Consensus 315 l~~~~~~~~~~af~~-------------------~~w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e------~g~v~ 368 (463)
T KOG2816|consen 315 LLSEFLQLLLFAFAT-------------------ETWMMFAAGVV-VALAGIVFPAIRAFASILVSPEE------QGKVF 368 (463)
T ss_pred HHHHHHHHHHHHHhc-------------------cchhhhHHHHH-HHhhcchhHHHHhHHHhhccccc------ccchh
Confidence 999888888877753 23444544443 44456677888888888877554 57788
Q ss_pred HHHHHHHHHHHHHHHhhhhhh
Q 019064 169 NFYLFATTLAAMIGVTAIVYV 189 (346)
Q Consensus 169 ~~~y~~~niG~~i~~~~~~~i 189 (346)
.+......+.+.+++.+-+.+
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHH
Confidence 888888888777777765544
No 246
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.00 E-value=0.062 Score=40.22 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=56.7
Q ss_pred HHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 26 LENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 26 ~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
.-||+| +.+.+.+.++.++|..+++.+.+....++.++.+...++.++. .+++.+..+.++..+.+..+.+.
T Consensus 6 igRFay----TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 6 IGRFAY----TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred hHHHHH----HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 458888 4566677789999999999999988888888888888888873 66777777777777776666654
No 247
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.94 E-value=0.24 Score=49.67 Aligned_cols=138 Identities=9% Similarity=-0.042 Sum_probs=82.5
Q ss_pred HHHHHHHcccc-----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh------HHHHHHHHHHHHHHHHHhhh
Q 019064 35 GISMVLYFKNE-----MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA------TCLVFGTLEVLSLVMLTIQA 103 (346)
Q Consensus 35 ~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~------~i~~~~~l~~~G~~ll~l~~ 103 (346)
.+.+.+|..+. +|++. .+++.-+.-.....+..|+.+++=.+...|+| -+.+++++..+|++++.+..
T Consensus 288 ~~sl~lfa~~~vd~~~~g~~i-p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~ 366 (493)
T PRK15462 288 GSSISLYIDRFVNRDMFGYTV-PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSA 366 (493)
T ss_pred hHHHHHHHHHhccchhcceee-CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555543 34332 23333344344444445555666555311221 25678888888888887754
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH-HHHHHHHH
Q 019064 104 YSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA-TTLAAMIG 182 (346)
Q Consensus 104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~-~niG~~i~ 182 (346)
....-. ...+.+++++...+..+|+=.+.|.-.++.++..|++- ++..+..++.. ..+|..++
T Consensus 367 ~~~~~~----------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~------~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 367 RWSAMY----------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV------TGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred hhcCCC----------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 322100 12356778888889999999999999999999988433 56666666653 35776666
Q ss_pred Hhhhhhh
Q 019064 183 VTAIVYV 189 (346)
Q Consensus 183 ~~~~~~i 189 (346)
..+..+.
T Consensus 431 g~~~~~~ 437 (493)
T PRK15462 431 GVIADQT 437 (493)
T ss_pred HHHHHHh
Confidence 6555544
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.71 E-value=1.3 Score=44.09 Aligned_cols=163 Identities=11% Similarity=0.026 Sum_probs=85.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCch-----hHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchhHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDI-----AGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATC 85 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~-----~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~~i 85 (346)
+-+|.+....+.-+|--+.|+-+.+ +.+.+..+. .....+...... ...+..++-+++++|+ +|.+.+
T Consensus 4 ~E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf 77 (472)
T TIGR00769 4 HELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence 3456677777777777777765543 344454432 223333332222 2333367789999996 998877
Q ss_pred HHHHHHHHHHHHHHHhhhccCC---CCCCC-CCCC--CCCC----------chhHHHHHHHHHHHHHhcccccc-chhhh
Q 019064 86 LVFGTLEVLSLVMLTIQAYSKS---LHPPD-CGKS--SCLK----------GAIAAYFYGSLYLYSLGCGGNRG-TLPAL 148 (346)
Q Consensus 86 ~~~~~l~~~G~~ll~l~~~~p~---~~~~~-~~~~--~~~~----------~~~~~~~~~~l~l~~iG~g~~~~-~~~a~ 148 (346)
.+.......-+.++.+.- .|. ++|.. |+.. .-+. .+....|++..=+.+ ....+ ...++
T Consensus 78 ~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~---~~vvS~lFW~f 153 (472)
T TIGR00769 78 YTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG---SVVLSLLFWGF 153 (472)
T ss_pred HHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 665444444333333321 121 11110 1000 0000 001112222111111 11112 44567
Q ss_pred ccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064 149 GAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190 (346)
Q Consensus 149 ~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~ 190 (346)
..|.+..++ -+++|..+....|+|.++|+.+..++.
T Consensus 154 andi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 154 ANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788887432 578999999999999999998888765
No 249
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.70 E-value=0.058 Score=53.74 Aligned_cols=130 Identities=9% Similarity=-0.040 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcccccc
Q 019064 64 TFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRG 143 (346)
Q Consensus 64 ~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~ 143 (346)
-.+..++.++|-.++ |+-+++.+++....+=++.++... +.|....-=++.++..+.+++
T Consensus 419 EI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~-------------------n~W~vLPieilqgit~aliWa 478 (618)
T KOG3762|consen 419 EILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ-------------------NPWMVLPIEILQGITHALIWA 478 (618)
T ss_pred hHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc-------------------CchheeeHHHHHHHHHHHHHH
Confidence 334455668999984 999999988887777666555432 345555556689999999999
Q ss_pred chhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064 144 TLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP 218 (346)
Q Consensus 144 ~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~ 218 (346)
++.+++.+-.|++- ++..+..+.-.+. .+|-.+|.++++.+.+.+|-+..|-+.++..++.++.+....+
T Consensus 479 a~~sY~s~vaPp~l---~at~Q~l~~g~f~--GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 479 AIISYASHVAPPGL---RATAQGLLQGIFH--GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred HHHHHHHhhCCCcc---hHHHHHHHHHHhc--ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999554 3334444444332 3444455666677777788888888877777666666655443
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.25 E-value=0.33 Score=46.62 Aligned_cols=153 Identities=15% Similarity=0.151 Sum_probs=108.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
+...+.+++...+-....|....|.+.++ .+.+|+++.|.+.+...-.....+.++.-+...|+..|.-+..+....+.
T Consensus 259 ~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~ 338 (451)
T KOG2615|consen 259 FISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLL 338 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHH
Confidence 45677777766666666666667777777 45799999999988877666777777777777888766555555444444
Q ss_pred HHH-HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064 93 VLS-LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171 (346)
Q Consensus 93 ~~G-~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~ 171 (346)
.+- .+++.... ....++++..+-++..+...+|+..+.....+.+. |+...+.+
T Consensus 339 ~vP~~llls~~~-------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~ 393 (451)
T KOG2615|consen 339 IVPAFLLLSLAR-------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIF 393 (451)
T ss_pred HHHHHHHHhccc-------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHH
Confidence 433 23333221 23568888999999999999999998888777543 67777777
Q ss_pred HHHHHHHHHHHHhhhhhhhh
Q 019064 172 LFATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~ 191 (346)
-....++-++||.+.+.++.
T Consensus 394 ~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 394 RSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHHHhhhhhhheeEE
Confidence 77788888888888876654
No 251
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.25 E-value=1 Score=45.13 Aligned_cols=146 Identities=7% Similarity=-0.057 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL 94 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~ 94 (346)
+....+....+.....|||+.-+... +|.+..-....... .-...-...+.+-|+. ||+.....+.++..+
T Consensus 322 ~~~~~~~~~~~~~~~~y~gl~~~~~~-----lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~ 392 (521)
T KOG0255|consen 322 YRTLYLLFIWFVFSLVYYGLSLNVSG-----LGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGI 392 (521)
T ss_pred HHHHHHHHHHHHHhHHHHhhhhhhhh-----cCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 44445555555566666666555443 44443332222222 3333344457889985 999999999999988
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064 95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA 174 (346)
Q Consensus 95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~ 174 (346)
+.+.+.... .. ...+...+...+...+.+....+...+.+|.+|+.- |..........
T Consensus 393 ~~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~ 450 (521)
T KOG0255|consen 393 GLLLFGWLP---DD-------------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNTAVGAISAA 450 (521)
T ss_pred HHHHHHHhh---cc-------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHH
Confidence 887777653 11 110112222222223333333444777889998543 44555555556
Q ss_pred HHHHHHHHHhhhhhhhh
Q 019064 175 TTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 175 ~niG~~i~~~~~~~i~~ 191 (346)
..+|+++++.+......
T Consensus 451 ~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 451 ARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 77888887766544433
No 252
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.80 E-value=0.053 Score=54.04 Aligned_cols=66 Identities=20% Similarity=0.221 Sum_probs=51.5
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH-HHHHHHH
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV-LSLVMLT 100 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~-~G~~ll~ 100 (346)
.+.+.+..|.. ++|+++++.+.++..--...++.+|+.|++|||| -++|..++++.+.. ...+++.
T Consensus 29 ~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 29 SLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred ccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHhee
Confidence 56678888886 6999999999999999999999999999999998 55555555555544 4444444
No 253
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.66 E-value=1.2 Score=43.42 Aligned_cols=153 Identities=12% Similarity=0.113 Sum_probs=87.4
Q ss_pred HHHHHHcccc-cCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064 36 ISMVLYFKNE-MHFDIAGASNTLT-NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC 113 (346)
Q Consensus 36 ~~l~~yl~~~-lg~s~~~a~~~~~-~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~ 113 (346)
+++..|++++ .|++..+...-+. ++.-.....-++...+.|. +|.|++++++.+...+-..++....
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 5688999987 8999988876554 3444444556677999997 5777777777776666555554432
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHHhhhhhhhhc
Q 019064 114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVFID 192 (346)
Q Consensus 114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~niG~~i~~~~~~~i~~~ 192 (346)
+....-+.-+.- |...++-.++-+-.|..-+++.-.+..+...--.. +..+|+++|.++.. .+.
T Consensus 93 ---------sv~~mq~~q~~y----g~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs--~~~ 157 (412)
T PF01770_consen 93 ---------SVLAMQLMQFFY----GLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS--FGG 157 (412)
T ss_pred ---------cHHHHHHHHHHH----HHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcC
Confidence 223333333333 33445555666666665554432223333333222 23445555554433 233
Q ss_pred cchhHHHHHHHHHHHHHHHHHH
Q 019064 193 QGWWLGFLISSVATLIGLIALA 214 (346)
Q Consensus 193 ~g~~~~f~i~~~~~~~~~~i~~ 214 (346)
.++...+.+......+++++-+
T Consensus 158 ~sy~~L~~isl~~~~~a~~~~~ 179 (412)
T PF01770_consen 158 VSYFQLNYISLASVSLALLIAL 179 (412)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 5566666777766666666543
No 254
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.24 E-value=3.5 Score=40.60 Aligned_cols=136 Identities=10% Similarity=-0.013 Sum_probs=93.2
Q ss_pred HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064 33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD 112 (346)
Q Consensus 33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~ 112 (346)
+.-..+..|+..+ |++....+..=..-......+..+..++-+|+ |-.|+=.++......-..+...+-..|....
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~-- 351 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPF-- 351 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--
Confidence 4446678888876 99988888777777778888888999999985 9999988888776654333333322232110
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064 113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~ 185 (346)
+..+...++.+..+-=+|.=++.-+..-+.-|..|+++ |+.+.+.-.-..|+-.++...+
T Consensus 352 -------~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 352 -------SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred -------hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHH
Confidence 12356667777777778888888888888877777543 5666666555566666655443
No 255
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.23 E-value=2.4 Score=42.07 Aligned_cols=75 Identities=13% Similarity=0.014 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 019064 61 FGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGG 140 (346)
Q Consensus 61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~ 140 (346)
-....+..++++-+-|. +|.|+++.+++..|..-.+-+.. | +.+.++.+-.++|+|.+.
T Consensus 60 Y~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~----~----------------N~y~~yfssallG~Gaal 118 (461)
T KOG3098|consen 60 YAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF----P----------------NSYYLYFSSALLGFGAAL 118 (461)
T ss_pred HHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh----c----------------chHHHHHHHHHhhhhHHh
Confidence 33445566777888998 59999999998887764333222 1 356788899999999998
Q ss_pred cccchhhhccCCCCCC
Q 019064 141 NRGTLPALGAGQFDEN 156 (346)
Q Consensus 141 ~~~~~~a~~adq~~~~ 156 (346)
...-...+..+...++
T Consensus 119 lw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 119 LWTGQGGYLTSNSTRE 134 (461)
T ss_pred eecccceehhhcCChh
Confidence 8887777777766643
No 256
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.60 E-value=0.56 Score=48.82 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-ccchhHHHHHHHH
Q 019064 16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTY-LSRFATCLVFGTL 91 (346)
Q Consensus 16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~-lGR~~~i~~~~~l 91 (346)
...+.++...+|..++-|..++++-|+.+++|.+.+.|..+...+.+ ...++..+||++.-|+ +.-+.+..+.++.
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999988866544 5667888999999987 3444444433333
No 257
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.58 E-value=8.8 Score=38.09 Aligned_cols=92 Identities=12% Similarity=0.028 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHhhhc--ccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHhcc
Q 019064 63 STFLLCLVGGFISDTY--LSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS-SCLKGAIAAYFYGSLYLYSLGCG 139 (346)
Q Consensus 63 ~~~~~~llgG~laD~~--lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~iG~g 139 (346)
..+++.++.+.+.+|. +||++++.++..++.++.++..+.- |...|-.-.+. .-.-+.+..+..+--.+.|+|-+
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3444556666676553 4899999999999999887776652 54332100000 00112334444445557899999
Q ss_pred ccccchhhhccCCCCCC
Q 019064 140 GNRGTLPALGAGQFDEN 156 (346)
Q Consensus 140 ~~~~~~~a~~adq~~~~ 156 (346)
........++++.++++
T Consensus 369 ~~~t~~~~ii~~~~~~~ 385 (461)
T KOG3098|consen 369 CFNTQRYVIIALLYPDD 385 (461)
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 99999999999999644
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.46 E-value=23 Score=34.92 Aligned_cols=184 Identities=11% Similarity=-0.048 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064 17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL 96 (346)
Q Consensus 17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~ 96 (346)
.+.+...-++.++.-=....-.++|+.+-+.-+..-.+..-..-.+...+..+.-|...||. -|.+++..+.++.-+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34444444444444433444456666654332322222222333455566666778888996 89999887776654432
Q ss_pred HH----HHhhhccCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHhccccccchhhhccCCCC---CCChhhhhhhhhHH
Q 019064 97 VM----LTIQAYSKSLHPPDCGKSSCLKGA-IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD---ENDPKGAKALASYF 168 (346)
Q Consensus 97 ~l----l~l~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~---~~~~~~~~~~~~~f 168 (346)
.+ +.+....+... ..++. ...++.+...+-++..=+..++-.+.--|... ++++.. +.+.-
T Consensus 83 ~~s~~~~~~l~~~~~~~--------~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~---La~~N 151 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSS--------SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGA---LARMN 151 (432)
T ss_pred HHHHHHHHHHHhCCccc--------cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhh---HHHHH
Confidence 22 11111111110 00011 12222222222333322333334444445432 222221 22222
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064 169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 212 (346)
Q Consensus 169 ~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i 212 (346)
.+.-=.=-+--++||.+.+.+....|...+..+.++..+++..+
T Consensus 152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 11111112356678888888888788887777777777666665
No 259
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=88.60 E-value=13 Score=36.16 Aligned_cols=157 Identities=13% Similarity=0.044 Sum_probs=86.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----hcccchhHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD-----TYLSRFATCL 86 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD-----~~lGR~~~i~ 86 (346)
+..+.+.++++..+.+..-+ |+...+|..++ .-|.|-.+.+.... ...-+-.=++.+.+.| | +||||.-+
T Consensus 28 ~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~fS~--ay~P~sLKllWaPiVDs~y~k~-~GrrksWv 102 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIFSF--AYWPFSLKLLWAPIVDSVYSKR-FGRRKSWV 102 (510)
T ss_pred hhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhhhh--hhhHHHHHHHHHhhhHHHHHHh-hcccccee
Confidence 45677888888888888776 77776665555 44666555433222 2233445678888888 7 49999765
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064 87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS 166 (346)
Q Consensus 87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~ 166 (346)
+= .-+.+|.+++.++-..+.... +++. ..+...+...++++-++.+.-...+-...-.....++ .+-
T Consensus 103 vp-~q~llG~~mllLs~~v~~~~g---~ng~---~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~------lgy 169 (510)
T KOG3574|consen 103 VP-CQYLLGLFMLLLSYLVDRGLG---GNGG---LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN------LGY 169 (510)
T ss_pred ee-hHHHHHHHHHHHhhCCCcccc---cCCC---CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh------cCc
Confidence 43 234567666666543222111 1111 1122223233445555555555555444444444222 333
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 019064 167 YFNFYLFATTLAAMIGVTAI 186 (346)
Q Consensus 167 ~f~~~y~~~niG~~i~~~~~ 186 (346)
.-...-.+.|.|.++|.++.
T Consensus 170 aST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 170 ASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hhHHHHHHHhhhHHhhccee
Confidence 44444556788888876653
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=88.51 E-value=2.7 Score=41.44 Aligned_cols=33 Identities=27% Similarity=0.199 Sum_probs=26.1
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 019064 46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY 78 (346)
Q Consensus 46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~ 78 (346)
.|.+..+......++..+..++.++||.++|++
T Consensus 278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred hCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 355555556666778889999999999999993
No 261
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=88.19 E-value=0.15 Score=51.77 Aligned_cols=84 Identities=14% Similarity=0.173 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-ccchhHHHHHHHHH
Q 019064 15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTY-LSRFATCLVFGTLE 92 (346)
Q Consensus 15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~-lGR~~~i~~~~~l~ 92 (346)
+...++.+...+|.+...|..++++-|++++++.+.++|+.+.....+ ...++.++||++-.|+ ++.++.+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 344566778888999999999999999999999999999988876544 6778899999999997 44555555555555
Q ss_pred HHHHHH
Q 019064 93 VLSLVM 98 (346)
Q Consensus 93 ~~G~~l 98 (346)
.+..++
T Consensus 385 ~v~~~~ 390 (539)
T PF03137_consen 385 IVSVIL 390 (539)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 554433
No 262
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=88.04 E-value=6 Score=37.49 Aligned_cols=115 Identities=6% Similarity=0.015 Sum_probs=66.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064 10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG 89 (346)
Q Consensus 10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~ 89 (346)
+++..|.++.+-..-+....+|.|. .||.......+|. ...+.+.........+.| .+-. ++|-|+|+.++.
T Consensus 24 ~~~~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg~--~sl~~~y~~l~~s~m~~~----~~Ir-~~g~K~tm~lav 95 (390)
T KOG3097|consen 24 RLGILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLGT--VSLGALYLSLIDSSMFMP----LLIR-FLGTKWTMVLAV 95 (390)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCccc--chhhhhhHHHHHHHHHHH----HHHH-HHhhHHHHHHHH
Confidence 3344566776666656656666554 7777777654443 333333333343444444 4444 579999999888
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCC
Q 019064 90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQ 152 (346)
Q Consensus 90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq 152 (346)
..|..-. .....| ...-++.+-...|.|.+.+.+.-.+++++.
T Consensus 96 ~~Y~lyi----A~Nl~p----------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 96 FPYALYI----AANLEP----------------RYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHH----Hhhcch----------------hHHhhccHHHhhccccccccccCcceecHH
Confidence 7776531 111111 223344455567888888887777776544
No 263
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.18 E-value=8.4 Score=35.67 Aligned_cols=139 Identities=11% Similarity=0.045 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchh---HHHHHHHHHHHHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHH
Q 019064 53 ASNTLTNFFGSTFLLCLVGGFISDTYLSRFA---TCLVFGTLEVLSLVMLTIQAY-SKSLHPPDCGKSSCLKGAIAAYFY 128 (346)
Q Consensus 53 a~~~~~~~~~~~~~~~llgG~laD~~lGR~~---~i~~~~~l~~~G~~ll~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~ 128 (346)
-+.+...|+..+.++.-+...+..+ .|++ .+.+...+....+.+..+..+ .|+ ..+...-+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~--s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~-------------kes~~~s~ 348 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSR--SSPKVESYMQIVFLVSIAALLLPILTSSVSPS-------------KESPSESL 348 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhc--CCcccchHHHHHHHHHHHHHHHHHHHhccCCC-------------cCCchHHH
Confidence 3567777776666666555555554 2333 233444443333333333221 122 11233346
Q ss_pred HHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHH
Q 019064 129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 208 (346)
Q Consensus 129 ~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~ 208 (346)
++..++-...|.+.|.+.-+=.+..|++. ++..+|||-.-.|+-.-++....---....+-+..|.+|.+.+.+
T Consensus 349 i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~ 422 (454)
T KOG4332|consen 349 IGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFV 422 (454)
T ss_pred HHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHH
Confidence 77778888889999998776555555432 688999998877776554422110001113556788888887776
Q ss_pred HHHH
Q 019064 209 GLIA 212 (346)
Q Consensus 209 ~~~i 212 (346)
+.+.
T Consensus 423 a~i~ 426 (454)
T KOG4332|consen 423 ASIL 426 (454)
T ss_pred HHHH
Confidence 6543
No 264
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=83.76 E-value=19 Score=36.03 Aligned_cols=109 Identities=10% Similarity=-0.049 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHhhhcccch-------hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019064 63 STFLLCLVGGFISDTYLSRF-------ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYS 135 (346)
Q Consensus 63 ~~~~~~llgG~laD~~lGR~-------~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 135 (346)
.-.+..++.+++--+. +|+ .-.-++..+...|++++........ .| +...+.++++.+.++++
T Consensus 336 ~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~-~~--------~~~~s~~~lil~y~l~s 405 (498)
T COG3104 336 FIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG-GP--------SGLVSVWWLVLSYVLQS 405 (498)
T ss_pred HHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc-CC--------CCCcCHHHHHHHHHHHH
Confidence 3344444555655552 333 1334566666667666665521111 00 01346788999999999
Q ss_pred HhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064 136 LGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV 187 (346)
Q Consensus 136 iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~ 187 (346)
+|+=++.|.-.++.+..-|+ .-++..++.|+.+...|..++..+.+
T Consensus 406 ~gEL~iSpvGLs~~t~laP~------~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 406 FGELFISPVGLSMVTKLAPP------ALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHhCHHHHHHHHHhChH------HHHHHHHHHHHHHHHHHHHhhceecc
Confidence 99988888888877777663 22466666777777777777766655
No 265
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=81.90 E-value=4.9 Score=41.12 Aligned_cols=130 Identities=22% Similarity=0.154 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064 83 ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK 162 (346)
Q Consensus 83 ~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~ 162 (346)
++...-+..+.+|..++-..++. .+ ....+.++...+...+ ++..+|+.++.++++... ..-.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~-g~-------------~~nlv~ylt~~~~~~~-~~aa~~v~~f~G~~~~~~--l~g~ 94 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFF-GL-------------VSNLVTYLTLELHASG-GGAANNVNAFGGTQFLLP--LLGA 94 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHh-cc-------------hhHHHHHHHHHhccch-HHHHHHHHHHhhHHHHHH--HHHH
Confidence 44444455566666666655432 11 1234556666666666 889999999999999752 2233
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecC-CCCCcchhHHHHHHHHH
Q 019064 163 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQ-PGESPLVRVAQVIVVAI 241 (346)
Q Consensus 163 ~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~-p~gs~l~~i~~v~~~a~ 241 (346)
.+.-.|...|+.+++++++..+. .++++...++.++..+-+ .+.... ..++|-+....++..++
T Consensus 95 ~laD~f~gry~tI~~~s~i~~~G------------~~~lt~~a~~~~l~p~~~---~~~~~~~~c~~~s~~q~~~~~~~l 159 (571)
T KOG1237|consen 95 FLADSFLGRYFTINIGSLISLLG------------LFGLTLSAMIPALLPFMC---KFKPGGNVCESPSKLQLAVLYGAL 159 (571)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH------------HHHHHHHHHhhhcCCccc---cCCCCCCcccCcchHHHHHHHHHH
Confidence 46677888999999999986543 444444444443332222 111111 12334455666676676
Q ss_pred Hhc
Q 019064 242 KNR 244 (346)
Q Consensus 242 ~~~ 244 (346)
+..
T Consensus 160 ~li 162 (571)
T KOG1237|consen 160 YLI 162 (571)
T ss_pred HHh
Confidence 654
No 266
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=79.99 E-value=29 Score=33.83 Aligned_cols=155 Identities=14% Similarity=0.093 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCC-----------------------chhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHF-----------------------DIAGASNTLTNFFGSTFLLCLVGGFISDT 77 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~-----------------------s~~~a~~~~~~~~~~~~~~~llgG~laD~ 77 (346)
.+..+|+++.|.-+.+-...-+.++.+- .....+.+..+-..-+.+.-++.-+.-+|
T Consensus 6 w~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP~fi~~ 85 (402)
T PF02487_consen 6 WLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAPFFIHR 85 (402)
T ss_pred HHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhHhhhhh
Confidence 3456788999987776666555521110 01111223333444555666677788887
Q ss_pred cccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCC
Q 019064 78 YLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND 157 (346)
Q Consensus 78 ~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~ 157 (346)
. .-..=+.+...+..+|+++.+++. +.+.-+++..+.+++.|.......++.+ .|++.
T Consensus 86 v-~y~~Ri~~~~~l~~~g~l~va~~~-------------------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~~- 143 (402)
T PF02487_consen 86 V-PYWIRILICVALSAAGMLLVAFSP-------------------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGKS- 143 (402)
T ss_pred c-cchHHHHHHHHHHHHHHhheeecc-------------------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCcc-
Confidence 5 433334445556667776655431 3456678888999999988888888644 55421
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHHHHHH
Q 019064 158 PKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVAT 206 (346)
Q Consensus 158 ~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~~~ 206 (346)
. .++|-.+...++++|...-..+.. ..+-+..+++..+.-
T Consensus 144 --------~-l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp 184 (402)
T PF02487_consen 144 --------S-LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLP 184 (402)
T ss_pred --------c-cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 1 233344455555555543222333 234455666554443
No 267
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=78.96 E-value=4.1 Score=40.66 Aligned_cols=191 Identities=14% Similarity=0.064 Sum_probs=99.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHH--HHHHHHHHHhhhcccc---hhHHHH
Q 019064 13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTF--LLCLVGGFISDTYLSR---FATCLV 87 (346)
Q Consensus 13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~--~~~llgG~laD~~lGR---~~~i~~ 87 (346)
.|+..+..+...+...+.+.-+-+-...+....++++..++............ ..++...+.--+ +|+ ++.+..
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~-l~~i~~r~~~~~ 338 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTR-LGKIDKRRIILL 338 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHH-hhhhccceeeee
Confidence 46777777777777788887766666666666778888777666554433221 222333343333 233 333333
Q ss_pred HHHHHHHHHHHHHhh-hccC-CCCC-----CCCCC---CCCCC--chhHHHHHHH-HHHHHHhccccccchhhhccCCCC
Q 019064 88 FGTLEVLSLVMLTIQ-AYSK-SLHP-----PDCGK---SSCLK--GAIAAYFYGS-LYLYSLGCGGNRGTLPALGAGQFD 154 (346)
Q Consensus 88 ~~~l~~~G~~ll~l~-~~~p-~~~~-----~~~~~---~~~~~--~~~~~~~~~~-l~l~~iG~g~~~~~~~a~~adq~~ 154 (346)
++++......+...- .+.+ .+.+ ..|+. +-|+. ..+.+.++++ .+++|++.-.+.....+.-++++.
T Consensus 339 g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLg 418 (488)
T KOG2325|consen 339 GFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILG 418 (488)
T ss_pred hHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhC
Confidence 433322222222211 1001 0111 11221 12554 2344444444 334666666666777788888888
Q ss_pred CCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064 155 ENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL 210 (346)
Q Consensus 155 ~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~ 210 (346)
+++... .+.++ -....++-.++++....+....|.+....+..+..++..
T Consensus 419 p~~q~~---~qg~~---~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~ 468 (488)
T KOG2325|consen 419 PRDQGT---MQGVF---SISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVA 468 (488)
T ss_pred Cccccc---eeEEE---EeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHH
Confidence 765321 22222 335666777777777777777777665555444443333
No 268
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=72.47 E-value=1.1e+02 Score=30.62 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=46.2
Q ss_pred cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHH
Q 019064 139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI 208 (346)
Q Consensus 139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~ 208 (346)
-.....--..+.+++|+.+ +++.+++.+....|+.+++.....+.+.+..||..+-.+.-+.+++
T Consensus 281 nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 281 NLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3444555566778886432 2688999988888988877777778999999999877664444444
No 269
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=69.59 E-value=48 Score=25.31 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 55 NTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 55 ~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
...........+++.++|++.|.. |.+....+...+..++
T Consensus 91 ~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 91 LMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHH
Confidence 334455667777888888888874 7666655554444443
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=68.51 E-value=41 Score=32.84 Aligned_cols=143 Identities=12% Similarity=0.022 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc--chhHHHHHHHHHHHHHH
Q 019064 20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS--RFATCLVFGTLEVLSLV 97 (346)
Q Consensus 20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lG--R~~~i~~~~~l~~~G~~ 97 (346)
+.++.++|.+...|+...+..-. ...-...+-......|+.+ =+++-+..- |.|-+.+-.++..+=++
T Consensus 252 L~lVY~aEY~InqGv~~tl~fp~--~~~~~r~~Y~~Y~~~YQ~G--------VFISRSS~~~~rir~lwils~LQ~~nl~ 321 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLLFPN--SFFSPRDQYRWYQLLYQLG--------VFISRSSLPFFRIRRLWILSLLQVINLV 321 (402)
T ss_pred HHHHHHHHHHHHhchHHHhcCCc--cCCCHHHHHHHHHHHHHHH--------HhhhhcceeeeehhhHHHHHHHHHHHHH
Confidence 44566777666666655543111 1111122222333333332 223322211 44444445555555444
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064 98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177 (346)
Q Consensus 98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni 177 (346)
++.+.+.+.- . .+.+..++-.+..|+-.|....|....+.|+.++++ |.-..+..-++-++
T Consensus 322 ~~~l~s~~~f-i------------psi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~ 382 (402)
T PF02487_consen 322 FLLLQSWYRF-I------------PSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSL 382 (402)
T ss_pred HHHHHHHHHH-h------------hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhH
Confidence 5444432211 1 145666666777899999999999999988876432 45555555666777
Q ss_pred HHHHHHhhhhhhhh
Q 019064 178 AAMIGVTAIVYVFI 191 (346)
Q Consensus 178 G~~i~~~~~~~i~~ 191 (346)
|.+++..++-.++.
T Consensus 383 GI~lAgll~l~le~ 396 (402)
T PF02487_consen 383 GILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777666555443
No 271
>PRK10263 DNA translocase FtsK; Provisional
Probab=63.39 E-value=45 Score=37.40 Aligned_cols=36 Identities=14% Similarity=-0.091 Sum_probs=19.6
Q ss_pred HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064 176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI 211 (346)
Q Consensus 176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~ 211 (346)
..|+++|..+..++....|..-+.++..++++++++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLi 176 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLT 176 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 346677766666666656654444444444443433
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=62.81 E-value=1.7e+02 Score=29.35 Aligned_cols=158 Identities=14% Similarity=0.173 Sum_probs=84.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-------------hhHHH-HHHHHHHHHHHHHHhhhccC--CCCCC
Q 019064 48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-------------FATCL-VFGTLEVLSLVMLTIQAYSK--SLHPP 111 (346)
Q Consensus 48 ~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR-------------~~~i~-~~~~l~~~G~~ll~l~~~~p--~~~~~ 111 (346)
.+..||......+..++.++.+++|.+.-.+ .+ ...+. ...++...|.+++.+...+. .+..+
T Consensus 173 tt~~eAKRfYpl~g~ganigli~sG~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~ 251 (491)
T PF03219_consen 173 TTVEEAKRFYPLFGLGANIGLIFSGQLTSYF-SSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDP 251 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 4567888888999999999999888877653 44 00111 12222233333333221111 11112
Q ss_pred CC-CC----CC-CCC-c--h-------hHHHHHHHHHH--HHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064 112 DC-GK----SS-CLK-G--A-------IAAYFYGSLYL--YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF 173 (346)
Q Consensus 112 ~~-~~----~~-~~~-~--~-------~~~~~~~~l~l--~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~ 173 (346)
.+ .. .+ -+. + . +..+..+++.. -++..-.+...--..+.+++++.+ ....+++.+..
T Consensus 252 ~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~ 326 (491)
T PF03219_consen 252 RFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSS 326 (491)
T ss_pred ccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHH
Confidence 22 10 00 000 0 0 11112222222 333334444555566667887643 25788888877
Q ss_pred HHHHHHHHHHhhhhhhhhccchhHHHHH-HHHHHHHHHH
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWWLGFLI-SSVATLIGLI 211 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i-~~~~~~~~~~ 211 (346)
..++-+.+-..+++.+.+..||..+-.+ |.++.+.++.
T Consensus 327 ~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~~ 365 (491)
T PF03219_consen 327 WTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGLL 365 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHHH
Confidence 7777777767778888889999987766 4544443433
No 273
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.97 E-value=40 Score=26.32 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064 61 FGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS 95 (346)
Q Consensus 61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G 95 (346)
.+...+.....||+-|+|.|-.+--+|..++..++
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 34455555667999999999776544444443333
No 274
>PF14007 YtpI: YtpI-like protein
Probab=57.71 E-value=32 Score=25.96 Aligned_cols=69 Identities=22% Similarity=0.338 Sum_probs=41.2
Q ss_pred CCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCC
Q 019064 151 GQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP 225 (346)
Q Consensus 151 dq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p 225 (346)
.++...+|.||..-++- ..+.+|.++.....--..- .+-...+.+.++.+++++.-.+.|.+.|++-.|
T Consensus 18 k~~Rs~~p~~k~~~~ak-----a~ialG~fl~~fgiNQ~~~-~~st~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 18 KYFRSKDPMEKKWYSAK-----ANIALGIFLILFGINQMFL-FGSTVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHhhcCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 45566666653221111 1355666654433222222 233457788889999999999999998887655
No 275
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=55.02 E-value=35 Score=24.87 Aligned_cols=49 Identities=18% Similarity=0.314 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064 171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI 222 (346)
Q Consensus 171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~ 222 (346)
+.....+++++| .+.||+.+++ +..+.+.++..++++++.+--.+.|++
T Consensus 13 ~~~il~~~~iis-fi~Gy~~q~~--~~~~~~~~~g~~~~~lv~vP~Wp~y~r 61 (76)
T PF06645_consen 13 MQYILIISAIIS-FIVGYITQSF--SYTFYIYGAGVVLTLLVVVPPWPFYNR 61 (76)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHhheeCCcHhhcC
Confidence 344566777766 4556776643 456666666666666655544444543
No 276
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.63 E-value=53 Score=24.88 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI 222 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~ 222 (346)
|+...+.+|+++|.+. ++.++..+|. .|. .++..++.+++.+--.+.|++
T Consensus 27 ~~q~ilti~aiVg~i~-Gf~~Qqls~t-vy~-vg~~~v~t~li~LPpwP~y~r 76 (101)
T KOG4112|consen 27 FQQLILTIGAIVGFIY-GFAQQQLSVT-VYI-VGAGFVFTLLITLPPWPWYRR 76 (101)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHH-HHH-HHHHHHHHHHhcCCCchhhhc
Confidence 4566788999988654 5556656654 333 333344455544444455554
No 277
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=46.01 E-value=88 Score=20.84 Aligned_cols=30 Identities=13% Similarity=0.276 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064 61 FGSTFLLCLVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~ 90 (346)
.....+.....|+..|+++|..+...+..+
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~ 39 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGL 39 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 344555666789999999998554443333
No 278
>PRK02237 hypothetical protein; Provisional
Probab=45.05 E-value=60 Score=25.38 Aligned_cols=49 Identities=8% Similarity=0.011 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 019064 51 AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (346)
Q Consensus 51 ~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~ 100 (346)
++++.+..+|.+...+.+++.+|..|.. -.-+-=.++..+..+|..+..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhe
Confidence 4589999999999999999999999986 433334567777778765543
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=44.39 E-value=3.2e+02 Score=26.90 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 123 ~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
..+..++..++.+++.|.......++.+ .+|+ .+.+.+..+..++++++..
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~----------~~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPS----------TYSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCH----------HHHHHHHhcchhHHHHHHH
Confidence 4556666677788888888888888665 6662 2445555555565555433
No 280
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=42.93 E-value=92 Score=30.56 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=30.7
Q ss_pred hhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019064 145 LPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ 193 (346)
Q Consensus 145 ~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~ 193 (346)
.....++.-|+.. .+..|...-...|+|..++..++..+.+..
T Consensus 339 ~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 339 SLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred HHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3345667777554 367788888888999998888888776543
No 281
>COG3619 Predicted membrane protein [Function unknown]
Probab=41.78 E-value=2.6e+02 Score=25.02 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=20.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHccc
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKN 44 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~ 44 (346)
+-.+.+.+...+..-++|.......+.+.|.
T Consensus 11 ~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TG 41 (226)
T COG3619 11 RLGLLLALVAGFVDAFGFLHLGGVFVSFMTG 41 (226)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCchhhheec
Confidence 4445556667777888886666666666664
No 282
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=36.17 E-value=2.1e+02 Score=22.35 Aligned_cols=50 Identities=10% Similarity=0.105 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 019064 50 IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (346)
Q Consensus 50 ~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~ 100 (346)
+..++.+..+|.+.....+++.+|..|+. -.-+-=.++..++.+|..+..
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheE
Confidence 36688999999999999999999999986 444444567778888765543
No 283
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=28.08 E-value=4.8e+02 Score=23.99 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhh
Q 019064 123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG 160 (346)
Q Consensus 123 ~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~ 160 (346)
....+++.-++.|+..=|+++...- .-.++.+.+|++
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~-lPhEyK~~~pk~ 239 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILN-LPHEYKGYNPKK 239 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhc-ChhhhcCCCcce
Confidence 3455665555666665566655543 446667777653
No 284
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=27.76 E-value=2.2e+02 Score=26.99 Aligned_cols=76 Identities=11% Similarity=0.036 Sum_probs=53.8
Q ss_pred HHHHHHHHhHHHHHHHcccccCCc-hhHHHHHHHH----HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 019064 26 LENMGFIANGISMVLYFKNEMHFD-IAGASNTLTN----FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT 100 (346)
Q Consensus 26 ~e~~a~ygv~~~l~~yl~~~lg~s-~~~a~~~~~~----~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~ 100 (346)
+-.++.-++.+|+..+..+++.-+ ..+-....+. ...+..++..+.+++.|++ |......+..+...++.+.+.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHH
Confidence 457777789999999999988765 3444433333 3455666677778999986 888888777777777777666
Q ss_pred hh
Q 019064 101 IQ 102 (346)
Q Consensus 101 l~ 102 (346)
..
T Consensus 121 ~~ 122 (372)
T PF00854_consen 121 SG 122 (372)
T ss_dssp CC
T ss_pred hC
Confidence 54
No 285
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=24.47 E-value=2.4e+02 Score=19.41 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=8.6
Q ss_pred HHHHHHhhhcccchhHHHHHHH
Q 019064 69 LVGGFISDTYLSRFATCLVFGT 90 (346)
Q Consensus 69 llgG~laD~~lGR~~~i~~~~~ 90 (346)
.+|.++++ +++++-..+.+.+
T Consensus 42 ~~G~~~~~-~~~~~~~~igg~i 62 (67)
T PF02659_consen 42 LLGRRLGR-FIGSYAEWIGGII 62 (67)
T ss_pred HHHHHHHH-HHHHHHHHHHHHH
Confidence 33344444 3455543433333
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=24.42 E-value=5.1e+02 Score=25.42 Aligned_cols=156 Identities=13% Similarity=0.038 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHH-HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTN-FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE 92 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~-~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~ 92 (346)
.|.++--....+.--+-...+.+.....-+..-..+..-+-..+.. |.....++.++..++-+.= .|+-++....=+.
T Consensus 245 ~~k~~~~~~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~l 323 (406)
T KOG1479|consen 245 FKKIKDLAFNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLL 323 (406)
T ss_pred HHHHHHHhhchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHH
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064 93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172 (346)
Q Consensus 93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y 172 (346)
.+-...+.--.-.|...+ +-+++++...+.|+..|=...+...+...+.+ ++|++..+.+...++
T Consensus 324 fiPlF~~cn~~~~~v~~~------------~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~---~~e~e~aG~~m~~fl 388 (406)
T KOG1479|consen 324 FIPLFLLCNYPPLPVVFE------------SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVK---PSEKEAAGNLMVFFL 388 (406)
T ss_pred HHHHHHHhccCCCCceec------------CchHHHHHHHHHHhccchHhhheehhcCCCCC---hHHHHHHHHHHHHHH
Q ss_pred H-HHHHHHHHHHhh
Q 019064 173 F-ATTLAAMIGVTA 185 (346)
Q Consensus 173 ~-~~niG~~i~~~~ 185 (346)
. +...|++++...
T Consensus 389 ~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 389 VGGLALGSLLSWVF 402 (406)
T ss_pred HHHHHHhhHHHHHH
No 287
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=24.26 E-value=6.8e+02 Score=25.37 Aligned_cols=84 Identities=8% Similarity=-0.029 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019064 55 NTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLY 134 (346)
Q Consensus 55 ~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 134 (346)
.+-.+.+..+.+..+..|++-.++ .|.--+.++.+-...|-+ +.+++. +.+.+..+++-++.
T Consensus 302 ~veA~~tllga~~a~~ag~~~~~w-~~~~~l~l~v~s~~~~gl-l~~m~~----------------t~~Iw~~Y~~yvlf 363 (511)
T TIGR00806 302 AVDAASTLLGAITSFIAGFVNIRW-ARWSKLLIAVVSAIQAGL-VFWMSQ----------------SHDIWVLYVTYVLF 363 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhhHHHHHHHHHHHHHHH-hhhhhc----------------ccchHHHHHHHHHH
Confidence 333445667777888889987775 443333333332222322 333321 33688889988888
Q ss_pred HHhccccccchhhhccCCCCCC
Q 019064 135 SLGCGGNRGTLPALGAGQFDEN 156 (346)
Q Consensus 135 ~iG~g~~~~~~~a~~adq~~~~ 156 (346)
........+...+-+|....++
T Consensus 364 ~~~y~flitia~~~iA~~L~~~ 385 (511)
T TIGR00806 364 RGIYQFLVPIATFQIASSLSKE 385 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhccc
Confidence 8888888888888777776643
No 288
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.10 E-value=3.3e+02 Score=20.98 Aligned_cols=23 Identities=17% Similarity=0.023 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHhhhcccchh
Q 019064 61 FGSTFLLCLVGGFISDTYLSRFA 83 (346)
Q Consensus 61 ~~~~~~~~llgG~laD~~lGR~~ 83 (346)
.++..+...+.|..-|+++|-.+
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCc
Confidence 44555566667888888887533
No 289
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=24.09 E-value=5.6e+02 Score=27.10 Aligned_cols=34 Identities=6% Similarity=0.159 Sum_probs=21.8
Q ss_pred HHHHHHhh---hcccchhHHHHHHHHHHHHHHHHHhh
Q 019064 69 LVGGFISD---TYLSRFATCLVFGTLEVLSLVMLTIQ 102 (346)
Q Consensus 69 llgG~laD---~~lGR~~~i~~~~~l~~~G~~ll~l~ 102 (346)
.+.+-++| ++-||.|-++++.++.+++.+...+.
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444554 55567888888888777776655543
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=23.99 E-value=7e+02 Score=24.53 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184 (346)
Q Consensus 124 ~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~ 184 (346)
-+..++...+.|+..|-.......++.+..++ +||+.-+. ...++.++|-.+|..
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~---~e~e~aG~---~~~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDP---HEREVAGA---LMVIFLLVGLALGAV 426 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCH---HHHHHHHH---HHHHHHHHHHHHHHH
Confidence 45566668889999998888888888888663 34332333 333445555555543
No 291
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=23.96 E-value=4.7e+02 Score=22.50 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHH
Q 019064 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIG 209 (346)
Q Consensus 172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~ 209 (346)
|...-++-.+|..+++++.+..+. .+.+++++..++.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~~~ 204 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALLLLLL 204 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 333444444455555666666664 4555555444433
No 292
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=23.37 E-value=2.1e+02 Score=29.62 Aligned_cols=57 Identities=9% Similarity=-0.134 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHH--HHHhhh
Q 019064 21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVG--GFISDT 77 (346)
Q Consensus 21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llg--G~laD~ 77 (346)
++..+.+..+-|-+...+..-.-.++|.++..++..+..+...+.++||+| .+.+-+
T Consensus 441 ilGm~l~~~a~~ii~~pi~~P~l~~lGidpi~~~~~v~~~~~ig~iTPPvgl~lfvaa~ 499 (613)
T TIGR02123 441 ILGMGLPTTANYIITATLAAPALIALGVPPIAAHMFVFYFGILADITPPVALAAFAAAG 499 (613)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHHh
Confidence 445567788888887777666667899999999999999999999999987 444444
No 293
>PF03988 DUF347: Repeat of Unknown Function (DUF347) ; InterPro: IPR007136 This repeat is found as four tandem repeats in a family of bacterial membrane proteins. Each repeat contains two transmembrane regions and a conserved tryptophan.
Probab=23.28 E-value=2.3e+02 Score=19.03 Aligned_cols=23 Identities=26% Similarity=0.229 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhhhhhhhhccchh
Q 019064 174 ATTLAAMIGVTAIVYVFIDQGWW 196 (346)
Q Consensus 174 ~~niG~~i~~~~~~~i~~~~g~~ 196 (346)
+.-+...+|...+-++.++.|+.
T Consensus 6 a~ilt~~lGt~~~D~l~~~lglg 28 (55)
T PF03988_consen 6 AKILTTTLGTTAGDFLSKTLGLG 28 (55)
T ss_pred HHHHHHHhHHHHHHHHHhccCcc
Confidence 34445566666666777665543
No 294
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=22.19 E-value=2.9e+02 Score=25.02 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=45.4
Q ss_pred hccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 019064 137 GCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG 216 (346)
Q Consensus 137 G~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~ 216 (346)
|+.-..+...+-..+++.-+. +=.|..-.+.|+|..+| ...+.+.|++|-+....+.++...++-..++..
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq--------~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~ 86 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQ--------SQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA 86 (250)
T ss_pred CcccchhhhhHHHHHHhCCCH--------HHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 333344555554555554332 22344455688888876 566888899998888888888877777666554
No 295
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=21.87 E-value=3.5e+02 Score=27.12 Aligned_cols=69 Identities=10% Similarity=-0.029 Sum_probs=44.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccc-cC-----CchhHH-----------HHHHHHHHHHHHHHHHHHHHH
Q 019064 12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNE-MH-----FDIAGA-----------SNTLTNFFGSTFLLCLVGGFI 74 (346)
Q Consensus 12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~-lg-----~s~~~a-----------~~~~~~~~~~~~~~~llgG~l 74 (346)
..+|..+.+++++++..++.+...-+-..++-++ ++ -+++++ .+-+........+.+++--++
T Consensus 276 ~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l 355 (498)
T KOG0637|consen 276 VMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKL 355 (498)
T ss_pred hCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999998876554444444332 11 111111 123344566777888888999
Q ss_pred hhhcccc
Q 019064 75 SDTYLSR 81 (346)
Q Consensus 75 aD~~lGR 81 (346)
.|++ |-
T Consensus 356 ~~~~-g~ 361 (498)
T KOG0637|consen 356 SRKF-GT 361 (498)
T ss_pred HHhc-Cc
Confidence 9996 73
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=21.84 E-value=8.2e+02 Score=24.57 Aligned_cols=40 Identities=3% Similarity=0.098 Sum_probs=31.1
Q ss_pred hhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064 146 PALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI 191 (346)
Q Consensus 146 ~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~ 191 (346)
..+.-|.++.++ -.+++..+....|+|.++|..+..++.+
T Consensus 166 W~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 166 WGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666332 5789999999999999999988887776
No 297
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=21.41 E-value=6.7e+02 Score=26.55 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=30.8
Q ss_pred HHHHHHhh---hcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019064 69 LVGGFISD---TYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG 139 (346)
Q Consensus 69 llgG~laD---~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g 139 (346)
.+.+-++| ++-||.|-+.+..+...++.+...+.. | ..+++..++.+.+++.+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~--~----------------~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF--G----------------KPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--c----------------CcHHHHHHHHHHHHHHH
Confidence 33455555 555777777777777776665544432 2 23556666666655543
No 298
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=21.38 E-value=2.8e+02 Score=18.91 Aligned_cols=36 Identities=8% Similarity=0.186 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHH
Q 019064 170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA 205 (346)
Q Consensus 170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~ 205 (346)
-+.|+.-+|-+++.+........+++..+..+..+.
T Consensus 6 t~fWs~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~ 41 (57)
T PF11151_consen 6 TFFWSFILGEVVGYIGSSLTGVTYNFTTAAIIAVIF 41 (57)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Confidence 356778888888877776666667766665544443
No 299
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=21.10 E-value=1.8e+02 Score=20.04 Aligned_cols=24 Identities=13% Similarity=0.110 Sum_probs=18.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhHHH
Q 019064 14 FRACTFVFVLSALENMGFIANGIS 37 (346)
Q Consensus 14 ~~~~~~i~~~~~~e~~a~ygv~~~ 37 (346)
-|-+.+|-+..++.|+.|+++.++
T Consensus 10 triVLLISfiIlfgRl~Y~~I~a~ 33 (59)
T PF11119_consen 10 TRIVLLISFIILFGRLIYSAIGAW 33 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 466667777888899999988765
No 300
>PF09061 Stirrup: Stirrup; InterPro: IPR015146 The Stirrup domain, found in the prokaryotic protein ribonucleotide reductase, has a molecular mass of 9 kDa and is folded into an alpha/beta structure. It allows for binding of the reductase to DNA via electrostatic interactions, since it has a predominance of positive charges distributed on its surface []. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1DQ3_A.
Probab=20.28 E-value=41 Score=23.56 Aligned_cols=17 Identities=29% Similarity=0.432 Sum_probs=11.8
Q ss_pred cCCchhHHHHHHHHhHh
Q 019064 297 VCTVTQVEEVKILARMM 313 (346)
Q Consensus 297 ~~~~~~Ve~vK~~~r~l 313 (346)
+|..+.+||||+.+.++
T Consensus 62 ly~~tk~e~vkrmlhli 78 (79)
T PF09061_consen 62 LYEATKNEEVKRMLHLI 78 (79)
T ss_dssp HHHHH--HHHHHHHHHH
T ss_pred HHHhhchHHHHHHHHhc
Confidence 46778899999988764
No 301
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=20.04 E-value=3.9e+02 Score=22.25 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=22.3
Q ss_pred hhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCC
Q 019064 188 YVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP 225 (346)
Q Consensus 188 ~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p 225 (346)
+-..+.||.+.-+......+++.++++=.+|+|+.+.-
T Consensus 54 ~~spy~G~~s~~~ftv~fv~m~~~llfDI~P~YrfEDI 91 (155)
T PF10777_consen 54 YYSPYFGLGSVWGFTVFFVVMAAFLLFDIKPRYRFEDI 91 (155)
T ss_pred HhcchhhhHHHHHHHHHHHHHHHHHHhhccceeeeccc
Confidence 34455666554444444555566666667788877643
Done!