Query 019065
Match_columns 346
No_of_seqs 147 out of 826
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 10:21:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z0n_A 5'-AMP-activated protei 99.9 4.2E-23 1.5E-27 165.7 9.6 83 250-346 6-89 (96)
2 3nme_A Ptpkis1 protein, SEX4 g 99.9 3.9E-23 1.3E-27 192.6 10.6 114 222-346 128-253 (294)
3 2qlv_B Protein SIP2, protein S 99.9 9.5E-23 3.3E-27 189.2 10.9 84 253-346 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 5.9E-15 2E-19 150.4 8.2 79 252-343 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 1.1E-11 3.7E-16 124.8 8.3 68 254-334 16-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.4 6.7E-07 2.3E-11 75.2 7.7 70 253-330 7-101 (131)
7 3c8d_A Enterochelin esterase; 98.4 8.7E-07 3E-11 84.3 8.5 81 252-345 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 98.0 4.8E-06 1.7E-10 66.9 4.1 75 253-335 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.7 0.0001 3.5E-09 74.5 9.3 68 255-334 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.5 0.00014 4.7E-09 76.1 7.7 69 254-334 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.4 0.00018 6E-09 75.4 6.9 65 255-332 65-143 (755)
12 1bf2_A Isoamylase; hydrolase, 96.4 0.0029 9.9E-08 65.8 5.8 56 256-324 17-85 (750)
13 1qho_A Alpha-amylase; glycosid 96.4 0.0096 3.3E-07 60.7 9.3 78 253-335 580-673 (686)
14 1cyg_A Cyclodextrin glucanotra 96.4 0.014 4.6E-07 59.6 10.0 74 253-335 578-667 (680)
15 3vgf_A Malto-oligosyltrehalose 96.3 0.0021 7E-08 64.3 3.6 61 256-332 10-73 (558)
16 2wsk_A Glycogen debranching en 96.1 0.0073 2.5E-07 61.7 6.3 55 255-323 19-77 (657)
17 2bhu_A Maltooligosyltrehalose 96.1 0.0043 1.5E-07 62.8 4.5 61 256-333 35-96 (602)
18 2vn4_A Glucoamylase; hydrolase 96.0 0.016 5.3E-07 59.4 8.5 73 255-335 497-583 (599)
19 3bmv_A Cyclomaltodextrin gluca 96.0 0.015 5E-07 59.3 8.0 74 253-335 582-670 (683)
20 2vr5_A Glycogen operon protein 95.9 0.0096 3.3E-07 61.6 6.5 55 256-324 30-91 (718)
21 2laa_A Beta/alpha-amylase; SBD 95.9 0.018 6.3E-07 47.4 6.6 65 255-332 5-77 (104)
22 1d3c_A Cyclodextrin glycosyltr 95.8 0.019 6.6E-07 58.5 8.0 74 253-335 585-673 (686)
23 1vem_A Beta-amylase; beta-alph 95.3 0.036 1.2E-06 55.9 7.8 72 253-335 418-506 (516)
24 2e8y_A AMYX protein, pullulana 95.0 0.044 1.5E-06 56.5 7.7 66 256-334 114-186 (718)
25 1wzl_A Alpha-amylase II; pullu 94.9 0.032 1.1E-06 55.8 6.1 59 255-321 23-87 (585)
26 2fhf_A Pullulanase; multiple d 94.3 0.045 1.5E-06 59.8 6.0 68 255-334 304-385 (1083)
27 1j0h_A Neopullulanase; beta-al 93.9 0.047 1.6E-06 54.6 4.6 61 253-321 21-89 (588)
28 2wan_A Pullulanase; hydrolase, 93.7 0.078 2.7E-06 56.6 6.3 64 255-332 325-398 (921)
29 4aio_A Limit dextrinase; hydro 93.7 0.048 1.7E-06 55.6 4.4 65 256-333 137-215 (884)
30 2ya0_A Putative alkaline amylo 93.3 0.11 3.7E-06 53.6 6.2 66 256-333 25-106 (714)
31 3m07_A Putative alpha amylase; 93.2 0.13 4.4E-06 52.5 6.6 62 256-334 43-107 (618)
32 3faw_A Reticulocyte binding pr 93.2 0.064 2.2E-06 57.4 4.6 65 257-333 146-224 (877)
33 1gcy_A Glucan 1,4-alpha-maltot 92.9 0.018 6.3E-07 56.8 0.0 70 254-334 430-517 (527)
34 1ji1_A Alpha-amylase I; beta/a 89.4 0.17 5.8E-06 51.1 2.9 60 255-322 30-96 (637)
35 1ea9_C Cyclomaltodextrinase; h 89.3 0.085 2.9E-06 52.8 0.6 60 254-321 22-86 (583)
36 2wan_A Pullulanase; hydrolase, 89.2 0.41 1.4E-05 51.1 5.8 55 262-325 160-221 (921)
37 2ya1_A Putative alkaline amylo 86.5 1 3.4E-05 48.8 6.7 63 257-331 333-411 (1014)
38 2c3v_A Alpha-amylase G-6; carb 81.1 3 0.0001 34.1 5.9 64 255-330 10-80 (102)
39 4fch_A Outer membrane protein 80.9 1 3.5E-05 39.9 3.3 50 265-325 12-63 (221)
40 3tnu_B Keratin, type II cytosk 67.9 14 0.00048 30.5 6.8 63 187-249 34-96 (129)
41 3tnu_A Keratin, type I cytoske 62.6 13 0.00045 30.7 5.7 62 188-249 37-98 (131)
42 4fe9_A Outer membrane protein 55.2 10 0.00035 36.6 4.3 46 265-321 150-197 (470)
43 2eef_A Protein phosphatase 1, 54.7 14 0.00049 32.1 4.7 69 255-328 48-129 (156)
44 3qh9_A Liprin-beta-2; coiled-c 53.0 34 0.0011 27.4 6.1 40 189-228 26-65 (81)
45 3vkg_A Dynein heavy chain, cyt 50.7 15 0.0005 45.1 5.4 73 191-263 2016-2091(3245)
46 3swk_A Vimentin; cytoskeleton, 46.0 32 0.0011 26.9 5.1 45 190-234 1-45 (86)
47 4fe9_A Outer membrane protein 44.6 17 0.00057 35.2 3.9 53 265-328 260-319 (470)
48 3ol1_A Vimentin; structural ge 42.0 62 0.0021 26.5 6.4 45 188-232 19-63 (119)
49 4dny_A Metalloprotease STCE; m 41.0 25 0.00087 30.0 4.0 24 306-330 99-123 (126)
50 2b5u_A Colicin E3; high resolu 40.7 26 0.00089 36.2 4.7 70 176-252 297-366 (551)
51 1mhx_A Immunoglobulin-binding 40.3 8.5 0.00029 29.3 0.9 15 320-334 48-62 (65)
52 1x8y_A Lamin A/C; structural p 39.4 50 0.0017 25.7 5.2 67 173-240 13-82 (86)
53 2djm_A Glucoamylase A; beta sa 38.7 43 0.0015 27.3 4.9 65 255-323 21-91 (106)
54 4fem_A Outer membrane protein 38.3 21 0.0007 33.4 3.3 51 265-326 149-201 (358)
55 1igd_A Protein G; immunoglobul 35.7 11 0.00039 28.6 0.9 15 320-334 44-58 (61)
56 3fil_A Immunoglobulin G-bindin 34.8 8.1 0.00028 28.9 -0.0 14 320-333 39-52 (56)
57 3fpp_A Macrolide-specific effl 31.1 95 0.0033 27.9 6.4 42 172-213 59-100 (341)
58 3oja_A Leucine-rich immune mol 29.4 1E+02 0.0035 29.4 6.6 55 195-249 420-477 (487)
59 1gk4_A Vimentin; intermediate 29.1 1.3E+02 0.0043 23.2 5.9 62 180-242 18-82 (84)
60 2rpv_A Immunoglobulin G-bindin 28.9 17 0.00058 28.5 0.9 15 320-334 58-72 (75)
61 2xv5_A Lamin-A/C; structural p 28.6 1.7E+02 0.0059 22.4 6.6 56 189-244 5-63 (74)
62 4aef_A Neopullulanase (alpha-a 28.4 68 0.0023 32.2 5.4 49 256-320 126-178 (645)
63 4gln_D D-RFX001; heterochiral 26.9 20 0.00067 26.9 0.9 18 317-334 35-53 (56)
64 1ew4_A CYAY protein; friedreic 26.9 35 0.0012 27.7 2.5 18 311-330 67-84 (106)
65 4dk0_A Putative MACA; alpha-ha 26.8 89 0.003 28.4 5.5 11 242-252 143-153 (369)
66 1bxv_A Plastocyanin; copper pr 25.6 64 0.0022 23.3 3.6 11 308-318 55-66 (91)
67 1pgx_A Protein G; immunoglobul 25.5 17 0.00059 29.0 0.4 15 320-334 52-66 (83)
68 4ani_A Protein GRPE; chaperone 25.0 1.7E+02 0.0058 26.6 6.9 64 189-252 59-127 (213)
69 4emc_A Monopolin complex subun 24.7 1.5E+02 0.0051 26.9 6.4 36 190-225 28-63 (190)
70 3oja_B Anopheles plasmodium-re 24.6 90 0.0031 30.3 5.4 6 207-212 527-532 (597)
71 4fch_A Outer membrane protein 24.6 44 0.0015 29.3 2.9 49 266-324 117-169 (221)
72 3na7_A HP0958; flagellar bioge 24.5 1.6E+02 0.0056 26.4 6.7 26 205-230 127-152 (256)
73 1nkp_B MAX protein, MYC proto- 24.5 75 0.0026 24.0 3.9 33 191-223 49-81 (83)
74 4dzn_A Coiled-coil peptide CC- 24.4 1.1E+02 0.0037 20.4 4.0 27 190-223 3-29 (33)
75 4abm_A Charged multivesicular 24.1 1E+02 0.0036 23.8 4.6 34 204-237 7-40 (79)
76 2fqm_A Phosphoprotein, P prote 23.1 28 0.00096 27.4 1.2 27 272-312 1-27 (75)
77 4dk0_A Putative MACA; alpha-ha 22.5 1.6E+02 0.0054 26.7 6.3 7 265-271 211-217 (369)
78 4b6x_A AVRRPS4, avirulence pro 22.1 90 0.0031 25.2 3.9 68 144-212 9-78 (90)
79 2r9f_A Calpain-1 catalytic sub 22.0 50 0.0017 31.3 2.9 25 310-334 120-147 (339)
80 3bwu_D FIMD, outer membrane us 21.7 62 0.0021 25.9 3.1 19 308-326 27-45 (125)
81 3hnw_A Uncharacterized protein 20.4 2.2E+02 0.0075 24.0 6.3 28 192-219 78-105 (138)
82 2eqb_B RAB guanine nucleotide 20.2 3E+02 0.01 22.4 6.8 59 190-248 13-82 (97)
83 3nmd_A CGMP dependent protein 20.2 78 0.0027 24.7 3.1 35 180-216 33-67 (72)
84 2f1m_A Acriflavine resistance 20.1 1.5E+02 0.005 25.9 5.4 11 312-322 229-239 (277)
85 4etp_A Kinesin-like protein KA 20.1 2.2E+02 0.0074 27.7 7.0 25 240-264 46-70 (403)
No 1
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.89 E-value=4.2e-23 Score=165.68 Aligned_cols=83 Identities=34% Similarity=0.574 Sum_probs=73.5
Q ss_pred hCCCceEEEEEEecCCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCCC
Q 019065 250 SLSGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQ 329 (346)
Q Consensus 250 aLsgL~~VTF~W~g~AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP~ 329 (346)
+-...++|+|+|...|++|+|+|+||+|+ .++|.+. .|.|++++.|+||.|+|||+|||+|++||.
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~-------------~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~ 71 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS-------------QNNFVAILDLPEGEHQYKFFVDGQWTHDPS 71 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE-------------TTEEEEEEEECSEEEEEEEEETTEEECCTT
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC-------------CCEEEEEEEccCCCEEEEEEECCeEEcCCC
Confidence 34567999999998899999999999999 7899862 589999999999999999999999999999
Q ss_pred CCeecC-CCccceEEEeC
Q 019065 330 RESVTK-GGICNNILRVI 346 (346)
Q Consensus 330 nPtVtD-~G~vNNVLeVe 346 (346)
.|++.+ .|+.||+|.|.
T Consensus 72 ~~~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 72 EPIVTSQLGTVNNIIQVK 89 (96)
T ss_dssp SCEEECTTSCEEEEEEEC
T ss_pred CCeEECCCCCEeEEEEEc
Confidence 999887 79999999984
No 2
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.88 E-value=3.9e-23 Score=192.62 Aligned_cols=114 Identities=24% Similarity=0.374 Sum_probs=90.5
Q ss_pred Hhhhhhhhhhhhhhhcccchh------HHHHHHhh-CC--CceEEEEEEec-CCcEEEEEeeeCCCccccccCCCCCCCc
Q 019065 222 LQTKAVTEINKAEKLISDKDE------ELIAAEES-LS--GLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSI 291 (346)
Q Consensus 222 Lq~kae~~i~ea~~li~eK~~------~L~aAe~a-Ls--gL~~VTF~W~g-~AksV~VtGSFNnW~~~IpL~Kd~s~s~ 291 (346)
|-.+.-..+.+|-..+.++|+ .+..+... |. ..++|+|+|++ +|++|+|+|||++|+.+++|.++
T Consensus 128 Lm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~----- 202 (294)
T 3nme_A 128 MFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG----- 202 (294)
T ss_dssp HHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC-----
T ss_pred HHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc-----
Confidence 333333466777777777763 22222222 22 44899999999 59999999999999988999985
Q ss_pred cccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCCCCCee-cC-CCccceEEEeC
Q 019065 292 IEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 346 (346)
Q Consensus 292 ~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP~nPtV-tD-~G~vNNVLeVe 346 (346)
...|.|++++.||||+|+|||+|||+|++||++|.+ .+ .|+.||+|.|.
T Consensus 203 ------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 ------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp ------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred ------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 247999999999999999999999999999999987 45 79999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.88 E-value=9.5e-23 Score=189.23 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.1
Q ss_pred CceEEEEEEecCCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCCCCCe
Q 019065 253 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 332 (346)
Q Consensus 253 gL~~VTF~W~g~AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP~nPt 332 (346)
.+++|+|+|+++|++|+|+|+|++|++.++|.|.. .+.|.|++++.||||+|+|||+|||+|++||.+|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 56899999999999999999999999888998731 25789999999999999999999999999999999
Q ss_pred ecC-CCccceEEEeC
Q 019065 333 VTK-GGICNNILRVI 346 (346)
Q Consensus 333 VtD-~G~vNNVLeVe 346 (346)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 987 79999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.54 E-value=5.9e-15 Score=150.38 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=67.7
Q ss_pred CCceEEEEEEec--CCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeee--c
Q 019065 252 SGLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--V 326 (346)
Q Consensus 252 sgL~~VTF~W~g--~AksV~VtGSFNnW~~~-IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~--~ 326 (346)
.+..+|+|+++. +|++|+|+||||+|++. .+|.+ .+|.|++++.||||+|+|||+|||+|. +
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~ 81 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVL 81 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCC
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecC
Confidence 355789999988 59999999999999764 56765 389999999999999999999999999 8
Q ss_pred CCCCCeec---C-CCccceEE
Q 019065 327 DPQRESVT---K-GGICNNIL 343 (346)
Q Consensus 327 DP~nPtVt---D-~G~vNNVL 343 (346)
||++|... + .|..|+|.
T Consensus 82 d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 82 DPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CTTCCCEEEEECSSCTTSEEE
T ss_pred CCCCCcccccccCCcccccee
Confidence 89888754 3 68899985
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.23 E-value=1.1e-11 Score=124.82 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=59.9
Q ss_pred ceEEEEEEecCCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCCCCCe
Q 019065 254 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 332 (346)
Q Consensus 254 L~~VTF~W~g~AksV~VtGSFNnW~~~-IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP~nPt 332 (346)
...|.|.|+..|+.|+|.|+||+|.+. .+|++ .++.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 357888899989999999999999864 56764 4689999999999999999999999999999987
Q ss_pred ec
Q 019065 333 VT 334 (346)
Q Consensus 333 Vt 334 (346)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.39 E-value=6.7e-07 Score=75.22 Aligned_cols=70 Identities=24% Similarity=0.579 Sum_probs=53.7
Q ss_pred CceEEEEEEecC---CcEEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE---
Q 019065 253 GLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV--- 320 (346)
Q Consensus 253 gL~~VTF~W~g~---AksV~VtGS---FNnW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV--- 320 (346)
....|+|+...+ ++.|+|+|+ +.+|++. ++|.... .......|++++.||+| .+||||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi~~~ 78 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFKGYF 78 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEEEee
Confidence 457899999873 899999999 8999974 6776531 01257899999999998 59999999
Q ss_pred -----C-C-------eeecCCCC
Q 019065 321 -----D-G-------QWKVDPQR 330 (346)
Q Consensus 321 -----D-G-------eW~~DP~n 330 (346)
+ | .|...+.+
T Consensus 79 ~~~~~~~g~~~v~~~~WE~g~~N 101 (131)
T 2z0b_A 79 LEPKTIGGPCQVIVHKWETHLQP 101 (131)
T ss_dssp ECCCC----CEEEEEEECCSSCC
T ss_pred cCccccCCccccceeeECCCCCC
Confidence 5 3 68887733
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.35 E-value=8.7e-07 Score=84.32 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.3
Q ss_pred CCceEEEEEEecC-C-------cEEEEEeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeEE-EE
Q 019065 252 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 316 (346)
Q Consensus 252 sgL~~VTF~W~g~-A-------ksV~VtGSFNnW~~------~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrY-EY 316 (346)
.+.+.|||.|.++ | ++|+|. +++|.. +.+|+|. ...|+|+.++.||+|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 3567999999997 5 799998 344432 2357763 26899999999999999 99
Q ss_pred EEEEC------------------------CeeecCCCCCeecC-C-CccceEEEe
Q 019065 317 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 345 (346)
Q Consensus 317 KFIVD------------------------GeW~~DP~nPtVtD-~-G~vNNVLeV 345 (346)
.|+|| |..+.||.+|.... . |...|+++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78899999998764 3 777888875
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.97 E-value=4.8e-06 Score=66.92 Aligned_cols=75 Identities=27% Similarity=0.509 Sum_probs=56.2
Q ss_pred CceEEEEEEecC---CcEEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEEC--
Q 019065 253 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD-- 321 (346)
Q Consensus 253 gL~~VTF~W~g~---AksV~VtGSF---NnW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIVD-- 321 (346)
+...|+|+...+ |+.|+|+|+. .+|++. ++|.... ...+.+.|++++.||+| .+||||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 456788888864 8999999986 589864 6787530 00145899999999999 599999993
Q ss_pred -C--eeecCCCCCeecC
Q 019065 322 -G--QWKVDPQRESVTK 335 (346)
Q Consensus 322 -G--eW~~DP~nPtVtD 335 (346)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 5888887665554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.69 E-value=0.0001 Score=74.48 Aligned_cols=68 Identities=24% Similarity=0.357 Sum_probs=53.7
Q ss_pred eEEEEEEecC-CcEEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE---CCee--ec
Q 019065 255 EVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 326 (346)
Q Consensus 255 ~~VTF~W~g~-AksV~VtGSFNnW~~-~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIV---DGeW--~~ 326 (346)
..|+|+..+| |+.|.|.|+|++|.. .++|.+. ...|.|+++++ +++|.+ |+|.| ||.+ ..
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 5799998887 999999999999975 4688763 25799999997 788874 99999 6775 67
Q ss_pred CCCCCeec
Q 019065 327 DPQRESVT 334 (346)
Q Consensus 327 DP~nPtVt 334 (346)
||-...+.
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 87665443
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.52 E-value=0.00014 Score=76.08 Aligned_cols=69 Identities=26% Similarity=0.343 Sum_probs=53.8
Q ss_pred ceEEEEEEecC-CcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE---CCee--e
Q 019065 254 LEVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 325 (346)
Q Consensus 254 L~~VTF~W~g~-AksV~VtGSFNnW~~~-IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIV---DGeW--~ 325 (346)
..-|+|+..+| |+.|.|.|+||+|+.. .+|.+. ...|+|.+.++ +.+|. .|||.| ||+| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 35789999998 9999999999999864 678753 24699999997 88884 578888 5764 6
Q ss_pred cCCCCCeec
Q 019065 326 VDPQRESVT 334 (346)
Q Consensus 326 ~DP~nPtVt 334 (346)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788766544
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.42 E-value=0.00018 Score=75.37 Aligned_cols=65 Identities=20% Similarity=0.374 Sum_probs=50.5
Q ss_pred eEEEEEEecC-CcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-------eCCeEEEEEEEEC---C
Q 019065 255 EVVEIQYSGD-GEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---G 322 (346)
Q Consensus 255 ~~VTF~W~g~-AksV~VtGSFNnW~~~-IpL~Kd~s~s~~a~~~skesG~FsttL~-------LPPGrYEYKFIVD---G 322 (346)
..|+|+..+| |+.|.|.|+|++|... ++|.+. ..|+|.+.++ +++|.+ |||.|+ |
T Consensus 65 ~gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g 131 (755)
T 3aml_A 65 GATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGG 131 (755)
T ss_dssp TEEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTC
T ss_pred CeEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCC
Confidence 3689998887 9999999999999753 678763 5799999998 788865 888886 4
Q ss_pred ee--ecCCCCCe
Q 019065 323 QW--KVDPQRES 332 (346)
Q Consensus 323 eW--~~DP~nPt 332 (346)
.| +.||-...
T Consensus 132 ~~~~~~dpya~~ 143 (755)
T 3aml_A 132 AWVDRIPAWIRY 143 (755)
T ss_dssp CCEEECCTTCSC
T ss_pred cEEecCCcchhe
Confidence 55 44775443
No 12
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.44 E-value=0.0029 Score=65.76 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=45.0
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-eC------CeEEEEEEEECC
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 322 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~-----~IpL~Kd~s~s~~a~~~skesG~FsttL~-LP------PGrYEYKFIVDG 322 (346)
.|+|+..+| |+.|.|.+ |++|.. .++|.+. ..|+|.+.++ +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 389998887 99999998 988653 3567652 4699999986 66 899999999997
Q ss_pred ee
Q 019065 323 QW 324 (346)
Q Consensus 323 eW 324 (346)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 53
No 13
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.41 E-value=0.0096 Score=60.74 Aligned_cols=78 Identities=21% Similarity=0.378 Sum_probs=53.9
Q ss_pred CceEEEEEEec-----CCcEEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 019065 253 GLEVVEIQYSG-----DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 320 (346)
Q Consensus 253 gL~~VTF~W~g-----~AksV~VtGSFN---nW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV- 320 (346)
+...|+|+... .|+.|+|+|+.. +|++. ..|.+. .+++.......|++++.||+| .+||||+|
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a-----~~~l~~~~~~~W~~~v~l~~~~~~eyKy~~~ 654 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNA-----QGPLLAPNYPDWFYVFSVPAGKTIQFKFFIK 654 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCC-----BCCCBCTTTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhh-----hcccccCCCCcEEEEEEeCCCCeEEEEEEEE
Confidence 35678888875 478999999985 89871 222221 001111356799999999999 69999998
Q ss_pred --CC--eeecCCCCCeecC
Q 019065 321 --DG--QWKVDPQRESVTK 335 (346)
Q Consensus 321 --DG--eW~~DP~nPtVtD 335 (346)
+| .|...|+.-....
T Consensus 655 ~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 655 RADGTIQWENGSNHVATTP 673 (686)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred cCCCCEEeCCCCCeeEECC
Confidence 34 4888777665554
No 14
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=96.36 E-value=0.014 Score=59.57 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=55.3
Q ss_pred CceEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 019065 253 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 320 (346)
Q Consensus 253 gL~~VTF~W~g----~AksV~VtGSFN---nW~~~--I-pL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV- 320 (346)
+.+.|+|+... .++.|+|+|+-. +|++. + +|.... ......|++++.||.| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35789999876 389999999886 99875 4 565410 1256899999999988 79999998
Q ss_pred --CC--eeecCCCCCeecC
Q 019065 321 --DG--QWKVDPQRESVTK 335 (346)
Q Consensus 321 --DG--eW~~DP~nPtVtD 335 (346)
+| .|...|+.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 44 4877776655554
No 15
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.30 E-value=0.0021 Score=64.27 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=51.1
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCe-eecCCCCCe
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 332 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVDGe-W~~DP~nPt 332 (346)
.|+|+..+| |+.|.|.|.|+ ..++|.+. ..|.|.+.++ +.+|. .|+|.|||. ...||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 689999987 99999999987 56789874 5799999997 88995 699999997 888987653
No 16
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=96.07 E-value=0.0073 Score=61.66 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=44.5
Q ss_pred eEEEEEEecC-CcEEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCe
Q 019065 255 EVVEIQYSGD-GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 323 (346)
Q Consensus 255 ~~VTF~W~g~-AksV~VtGSFNnW~--~~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVDGe 323 (346)
..|+|+..+| |+.|.|.+ |+++. ..++|.+. ..|+|.+.++ +.+|.+ |+|.|+|.
T Consensus 19 ~g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 19 QGVNFTLFSAHAERVELCV-FDANGQEHRYDLPGH------------SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp SEEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE------------ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred CeEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC------------CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 3689998887 99999999 98765 35788752 5799999885 788987 99999983
No 17
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=96.05 E-value=0.0043 Score=62.83 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=49.5
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCCCCCee
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV 333 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP~nPtV 333 (346)
.|+|+..+| |+.|.|.|. + ..++|.+. ..|.|.+.+++.+|.+ |+|.|||....||-....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 689988887 999999994 2 35788763 4799999999889986 999999977788876554
No 18
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.03 E-value=0.016 Score=59.44 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=53.5
Q ss_pred eEEEEEEecC---CcEEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE---CC
Q 019065 255 EVVEIQYSGD---GEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 322 (346)
Q Consensus 255 ~~VTF~W~g~---AksV~VtGSFN---nW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV---DG 322 (346)
..|+|+.... |+.|+|+|+-. +|++. ++|.... .+..+..|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 6788888763 89999999885 89864 6776531 01124799999999998 59999998 34
Q ss_pred --eeecCCCCCeecC
Q 019065 323 --QWKVDPQRESVTK 335 (346)
Q Consensus 323 --eW~~DP~nPtVtD 335 (346)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3777776655444
No 19
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.96 E-value=0.015 Score=59.33 Aligned_cols=74 Identities=22% Similarity=0.315 Sum_probs=53.7
Q ss_pred CceEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEEC
Q 019065 253 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD 321 (346)
Q Consensus 253 gL~~VTF~W~g----~AksV~VtGSFN---nW~~~--I-pL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIVD 321 (346)
+.+.|+|+... .++.|+|+|+.. +|++. + +|.... ......|++++.||+| .+||||++=
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 652 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKK 652 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35789999876 389999999986 99864 5 565411 0246899999999998 799999982
Q ss_pred -C---eeecCCCCCeecC
Q 019065 322 -G---QWKVDPQRESVTK 335 (346)
Q Consensus 322 -G---eW~~DP~nPtVtD 335 (346)
+ .|...|+.-....
T Consensus 653 ~~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 653 NGNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSSCCEECCSSCEEEECC
T ss_pred cCCceEecCCCCeeEECC
Confidence 1 4666665544443
No 20
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.93 E-value=0.0096 Score=61.61 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=43.9
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCee
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 324 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~-----~~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVDGeW 324 (346)
.|+|+..+| |+.|.|.+ |+.+. ..++|.+. ..|+|.+.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~------------~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK------------TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE------------SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC------------CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 689998887 99999999 87554 24678752 5799999986 789987 999999853
No 21
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.85 E-value=0.018 Score=47.40 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=50.3
Q ss_pred eEEEEEEecCCcEEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcE-EEEEEeCCe-EEEEEEEECCe--eec
Q 019065 255 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLW-STVLWLYPG-TYEIKFIVDGQ--WKV 326 (346)
Q Consensus 255 ~~VTF~W~g~AksV~VtGSFN--nW~~~--IpL~Kd~s~s~~a~~~skesG~F-sttL~LPPG-rYEYKFIVDGe--W~~ 326 (346)
..|++.|...+++|+|...+. +|... ++|.+. ....| ..++.||.| .++|+|. ||. |-.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~------------~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDN 71 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA------------EISGYAKITVDIGSASQLEAAFN-DGNNNWDS 71 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE------------TTTTEEEEEEECTTCSCEEEEEE-CSSSCEES
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc------------cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcC
Confidence 578899998899999999985 89864 567652 22347 599999986 8999995 874 988
Q ss_pred CCCCCe
Q 019065 327 DPQRES 332 (346)
Q Consensus 327 DP~nPt 332 (346)
++..-.
T Consensus 72 n~g~Ny 77 (104)
T 2laa_A 72 NNTKNY 77 (104)
T ss_dssp TTTSCE
T ss_pred CCCccE
Confidence 776544
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.79 E-value=0.019 Score=58.50 Aligned_cols=74 Identities=20% Similarity=0.279 Sum_probs=53.0
Q ss_pred CceEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEEC
Q 019065 253 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD 321 (346)
Q Consensus 253 gL~~VTF~W~g----~AksV~VtGSFN---nW~~~--I-pL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIVD 321 (346)
....|+|+... .++.|+|+|+.. +|++. + +|.... ......|++++.||.| .+||||++=
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV---------VYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 35789999876 389999999886 99874 4 555310 1246899999999998 799999982
Q ss_pred --C--eeecCCCCCeecC
Q 019065 322 --G--QWKVDPQRESVTK 335 (346)
Q Consensus 322 --G--eW~~DP~nPtVtD 335 (346)
| .|...|+.-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 2 3666655544443
No 23
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.30 E-value=0.036 Score=55.91 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=51.7
Q ss_pred CceEEEEEEec----CCcEEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-
Q 019065 253 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 320 (346)
Q Consensus 253 gL~~VTF~W~g----~AksV~VtGSFN---nW~~~---IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV- 320 (346)
....|+|+... .|++|+|+|+-. +|++. ++|... ..++.|++++.||+| .+||||++
T Consensus 418 ~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~ 486 (516)
T 1vem_A 418 TPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIK 486 (516)
T ss_dssp CEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEE
T ss_pred CccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEE
Confidence 35889999865 389999999885 89875 245421 134599999999998 59999998
Q ss_pred C--C---eeecCCCCCeecC
Q 019065 321 D--G---QWKVDPQRESVTK 335 (346)
Q Consensus 321 D--G---eW~~DP~nPtVtD 335 (346)
| | .|...++.-...+
T Consensus 487 ~~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 487 SKDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp CTTSCEEEECSSCEEESSCC
T ss_pred eCCCCeeEEeCCCCEEEecC
Confidence 2 3 4766665544443
No 24
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=95.04 E-value=0.044 Score=56.47 Aligned_cols=66 Identities=18% Similarity=0.229 Sum_probs=49.0
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE--CCee--ecCC
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQW--KVDP 328 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~-~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIV--DGeW--~~DP 328 (346)
.|+|+..+| |+.|.|.+.|++|.. .++|.+. ..|.|.+.++ +.+|. .|+|.| +|.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 689998887 999999999998864 4788764 4699999987 56673 466666 4764 6788
Q ss_pred CCCeec
Q 019065 329 QRESVT 334 (346)
Q Consensus 329 ~nPtVt 334 (346)
-...+.
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 765543
No 25
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=94.91 E-value=0.032 Score=55.79 Aligned_cols=59 Identities=10% Similarity=-0.000 Sum_probs=42.4
Q ss_pred eEEEEEEec-CCcEEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 019065 255 EVVEIQYSG-DGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 321 (346)
Q Consensus 255 ~~VTF~W~g-~AksV~V-tGSFNnW~~----~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVD 321 (346)
..++|+-.+ .+++|.| .|+|++|+. .++|.+.. .++..|.|++.++.....+.|+|.|.
T Consensus 23 ~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 23 LRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAG--------SDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEE--------ECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEee--------cCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 455565444 4999999 899999965 46787631 01124579999998877889999885
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=94.32 E-value=0.045 Score=59.81 Aligned_cols=68 Identities=18% Similarity=0.105 Sum_probs=51.0
Q ss_pred eEEEEEEecC-CcEEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEEC------Ce-
Q 019065 255 EVVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ- 323 (346)
Q Consensus 255 ~~VTF~W~g~-AksV~VtG-SFNnW~~-~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVD------Ge- 323 (346)
..|+|+..+| |+.|.|.+ +|++|.. .++|.+. ...|+|++.++ +.+|.| |+|.|+ |.
T Consensus 304 ~gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~ 371 (1083)
T 2fhf_A 304 SGVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKV 371 (1083)
T ss_dssp TEEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEE
T ss_pred CeEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCcc
Confidence 3689998887 99999999 8899964 4678743 24699999985 788865 777775 43
Q ss_pred ---eecCCCCCeec
Q 019065 324 ---WKVDPQRESVT 334 (346)
Q Consensus 324 ---W~~DP~nPtVt 334 (346)
...||-...+.
T Consensus 372 ~~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 372 EQYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEEECCTTCSCBC
T ss_pred ccceecCCccceec
Confidence 47788765543
No 27
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=93.85 E-value=0.047 Score=54.59 Aligned_cols=61 Identities=13% Similarity=0.146 Sum_probs=43.6
Q ss_pred CceEEEEEEec-CCcEEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 019065 253 GLEVVEIQYSG-DGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 321 (346)
Q Consensus 253 gL~~VTF~W~g-~AksV~V-tGSFNnW~~------~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVD 321 (346)
....++|+... .+++|.| .|+|++|.. .++|.+.. .++..|.|++.++.....+.|+|.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~--------~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 21 ETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTG--------SDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEE--------ECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEee--------cCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 34566776554 5999999 799999964 47887631 01124679999988777788898885
No 28
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=93.73 E-value=0.078 Score=56.61 Aligned_cols=64 Identities=16% Similarity=0.253 Sum_probs=47.2
Q ss_pred eEEEEEEecC-CcEEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEE--CCe--e
Q 019065 255 EVVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--W 324 (346)
Q Consensus 255 ~~VTF~W~g~-AksV~VtGSFNnW~----~~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIV--DGe--W 324 (346)
..|+|+..+| |+.|.|.+ |++|. ..++|.+. ..|.|.+.++ +.+|.+ |+|.| +|. +
T Consensus 325 ~gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~ 390 (921)
T 2wan_A 325 DATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQT 390 (921)
T ss_dssp SEEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEE
T ss_pred CeEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEE
Confidence 3689999887 99999997 99994 34788763 4699999986 567743 66666 665 4
Q ss_pred ecCCCCCe
Q 019065 325 KVDPQRES 332 (346)
Q Consensus 325 ~~DP~nPt 332 (346)
..||-...
T Consensus 391 ~~DPya~~ 398 (921)
T 2wan_A 391 AVDPYARA 398 (921)
T ss_dssp ECCTTCSS
T ss_pred ecCCccee
Confidence 67886544
No 29
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=93.66 E-value=0.048 Score=55.63 Aligned_cols=65 Identities=17% Similarity=0.089 Sum_probs=45.4
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCccccc--cCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEECCe--------
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHHRIK--MDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-------- 323 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~~Ip--L~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVDGe-------- 323 (346)
.|+|+..+| |+.|.|.+-+++|..... |.+ ...|+|++.++ +.+|.| |+|.|+|.
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~------------~~~g~W~~~~~~~~~g~~-Y~y~v~~~~~~~~~~~ 203 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK------------ESNGVWSVTGPREWENRY-YLYEVDVYHPTKAQVL 203 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECE------------EETTEEEEEEEGGGTTCE-EEEEEEEEETTTTEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec------------CCCCEEEEEECCCCCCCE-EEEEEeCCCCCccccc
Confidence 599998887 999999995555654322 222 35799999986 677754 88888752
Q ss_pred --eecCCCCCee
Q 019065 324 --WKVDPQRESV 333 (346)
Q Consensus 324 --W~~DP~nPtV 333 (346)
...||-...+
T Consensus 204 ~~~~~DPya~~~ 215 (884)
T 4aio_A 204 KCLAGDPYARSL 215 (884)
T ss_dssp EEEECCTTCSEE
T ss_pred CccccCCCeeee
Confidence 3467765443
No 30
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=93.27 E-value=0.11 Score=53.58 Aligned_cols=66 Identities=18% Similarity=0.297 Sum_probs=48.1
Q ss_pred EEEEEEecC-CcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEe--CCe-----EEEEEEEEC--
Q 019065 256 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 321 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtG-SFNnW~~---~IpL~Kd~s~s~~a~~~skesG~FsttL~L--PPG-----rYEYKFIVD-- 321 (346)
.|+|+..+| |+.|.|.+ +|++|.. .++|.+. ..|+|.+.++- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 389998887 99999999 8888864 4778763 46999998863 134 166888886
Q ss_pred Ce--eecCCCCCee
Q 019065 322 GQ--WKVDPQRESV 333 (346)
Q Consensus 322 Ge--W~~DP~nPtV 333 (346)
|. -..||-...+
T Consensus 93 ~~~~~~~DPya~~~ 106 (714)
T 2ya0_A 93 GKTVLALDPYAKSL 106 (714)
T ss_dssp TEEEEECCTTCSEE
T ss_pred CceEEecCCceeee
Confidence 64 4678876443
No 31
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=93.19 E-value=0.13 Score=52.53 Aligned_cols=62 Identities=19% Similarity=0.235 Sum_probs=47.6
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeEEEEEEEEC-CeeecCCCCCe
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD-GQWKVDPQRES 332 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~-LPPGrYEYKFIVD-GeW~~DP~nPt 332 (346)
.|+|+..+| |+.|.|.+ +|. .++|.+. ..|.|.+.++ +.+|. .|+|.|+ |....||-...
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 589999987 89999998 354 4688864 4689999884 78886 5889995 56888987655
Q ss_pred ec
Q 019065 333 VT 334 (346)
Q Consensus 333 Vt 334 (346)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 43
No 32
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=93.18 E-value=0.064 Score=57.37 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=49.4
Q ss_pred EEEEEecC-CcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeE-----EEEEEEECC--e-
Q 019065 257 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVDG--Q- 323 (346)
Q Consensus 257 VTF~W~g~-AksV~VtG-SFNnW~~---~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGr-----YEYKFIVDG--e- 323 (346)
|.|+..+| |+.|.|.+ ++++|.. .++|.+. ..|+|.+.+.+.||. +.|+|.|++ .
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 89998887 99999998 6777853 4788763 579999999776762 678888863 3
Q ss_pred -eecCCCCCee
Q 019065 324 -WKVDPQRESV 333 (346)
Q Consensus 324 -W~~DP~nPtV 333 (346)
...||-...+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 5778876544
No 33
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=92.93 E-value=0.018 Score=56.75 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCcEEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEE-C-
Q 019065 254 LEVVEIQY-SG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 321 (346)
Q Consensus 254 L~~VTF~W-~g---~AksV~VtGSFN---nW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIV-D- 321 (346)
...|+|+. .. .++.|+|+|+-. +|++. ++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 45688886 33 389999999885 89873 667521 146789999999999 69999997 3
Q ss_pred -C-----eeecCCCCCeec
Q 019065 322 -G-----QWKVDPQRESVT 334 (346)
Q Consensus 322 -G-----eW~~DP~nPtVt 334 (346)
| .|...|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 3 376666654433
No 34
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=89.41 E-value=0.17 Score=51.08 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=41.6
Q ss_pred eEEEEEEe----cC-CcEEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECC
Q 019065 255 EVVEIQYS----GD-GEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 322 (346)
Q Consensus 255 ~~VTF~W~----g~-AksV~VtGSFNnW~~~IpL~K--d~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDG 322 (346)
..|+|+.. ++ ++.|.|.+.|++-...++|.+ .. .++..|.|++.++.......|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~--------~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSND--------PTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEEC--------TTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeecc--------ccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35778766 55 899999999875222478875 21 012358999999876566679999975
No 35
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=89.30 E-value=0.085 Score=52.78 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=41.8
Q ss_pred ceEEEEEEec-CCcEEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 019065 254 LEVVEIQYSG-DGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 321 (346)
Q Consensus 254 L~~VTF~W~g-~AksV~V-tGSFNnW~~---~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVD 321 (346)
...++|+... .+++|.| .|+|++|.. .++|.+.. .++..|.|++.++.....+.|||.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLA--------TDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEE--------ECSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEe--------ccCCeEEEEEEEECCCceEEEEEEEE
Confidence 3455565444 4899999 799999975 46888631 01124679999987777778888773
No 36
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=89.25 E-value=0.41 Score=51.12 Aligned_cols=55 Identities=22% Similarity=0.398 Sum_probs=38.2
Q ss_pred ecCCcEEEEEeee-------CCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeee
Q 019065 262 SGDGEIVEVAGSF-------NGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 325 (346)
Q Consensus 262 ~g~AksV~VtGSF-------NnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~ 325 (346)
...+..+.+.|+| .+|.+.-.... +....+|.|+.+..||+|.||||+.++|.|.
T Consensus 160 ~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~---------~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 160 SANPVTAVLVGDLQQALGAANNWSPDDDHTL---------LKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp ECCCCCEEEEETTSGGGTCSSSSCTTCGGGB---------CEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccchhhhccccccCCCCCCcce---------eeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 3345678888866 46775422111 1112478999999999999999999998773
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=86.50 E-value=1 Score=48.83 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=46.0
Q ss_pred EEEEEecC-CcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeC--Ce-----EEEEEEEEC--C
Q 019065 257 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD--G 322 (346)
Q Consensus 257 VTF~W~g~-AksV~VtG-SFNnW~~---~IpL~Kd~s~s~~a~~~skesG~FsttL~LP--PG-----rYEYKFIVD--G 322 (346)
|+|+..+| |+.|.|.+ +|++|.. .++|.+. ..|+|.+.++.. +| -+.|+|.|+ |
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~ 400 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 400 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeCC
Confidence 89998887 99999999 7888864 4788763 569999988631 23 256777775 5
Q ss_pred e--eecCCCCC
Q 019065 323 Q--WKVDPQRE 331 (346)
Q Consensus 323 e--W~~DP~nP 331 (346)
. ...||-..
T Consensus 401 ~~~~~~DPYa~ 411 (1014)
T 2ya1_A 401 KTVLALDPYAK 411 (1014)
T ss_dssp EEEEECCTTCS
T ss_pred eEEEecCccce
Confidence 4 46788644
No 38
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=81.09 E-value=3 Score=34.11 Aligned_cols=64 Identities=17% Similarity=0.276 Sum_probs=45.6
Q ss_pred eEEEEEEecCCcEEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEECC--eeecC
Q 019065 255 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 327 (346)
Q Consensus 255 ~~VTF~W~g~AksV~VtGSFN--nW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIVDG--eW~~D 327 (346)
..+++.|..++..|+|-=.+. .|... ++|.+. .-.|.|..++.|+.+ .++|+| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 457777777788888875564 48753 678652 136778999999975 899999 675 48765
Q ss_pred CCC
Q 019065 328 PQR 330 (346)
Q Consensus 328 P~n 330 (346)
...
T Consensus 78 ~g~ 80 (102)
T 2c3v_A 78 QGR 80 (102)
T ss_dssp GGT
T ss_pred CCc
Confidence 443
No 39
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=80.90 E-value=1 Score=39.86 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=38.8
Q ss_pred CcEEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeee
Q 019065 265 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 325 (346)
Q Consensus 265 AksV~VtGSFNnW~~--~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~ 325 (346)
.++++|+|++++|.. ..+|.+.. ...|.|..++.|+-|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 688999999998863 35676542 2478999999998774 89999886653
No 40
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=67.92 E-value=14 Score=30.49 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHh
Q 019065 187 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 249 (346)
Q Consensus 187 n~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li~eK~~~L~aAe~ 249 (346)
...||..|++.+..-+.++..+|.+..-.+..|+-++...+.++..++..|......|..++.
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~ 96 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQ 96 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 456889999999988888888888888888888888888888888888888776655555443
No 41
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=62.64 E-value=13 Score=30.75 Aligned_cols=62 Identities=16% Similarity=0.214 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHh
Q 019065 188 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 249 (346)
Q Consensus 188 ~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li~eK~~~L~aAe~ 249 (346)
..||..|++.+..-+.++..+|.+-.-.+..|+-++...+.++..++..|......|..++.
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~ 98 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRC 98 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778888888888888877777777777778788888888888888888766655555443
No 42
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.20 E-value=10 Score=36.64 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.1
Q ss_pred CcEEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEEC
Q 019065 265 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 321 (346)
Q Consensus 265 AksV~VtGSFNnW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVD 321 (346)
.+..+|+|++++|... .+|.+.. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999854 3444321 3578999998887766 7999964
No 43
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.68 E-value=14 Score=32.09 Aligned_cols=69 Identities=12% Similarity=0.239 Sum_probs=45.3
Q ss_pred eEEEEEEec--CCcEEEEEeeeCCCcccc--ccCCCCCCCccccccccCCCcEEEEEEeCC-----e--EEEEEEEECCe
Q 019065 255 EVVEIQYSG--DGEIVEVAGSFNGWHHRI--KMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ 323 (346)
Q Consensus 255 ~~VTF~W~g--~AksV~VtGSFNnW~~~I--pL~Kd~s~s~~a~~~skesG~FsttL~LPP-----G--rYEYKFIVDGe 323 (346)
..-+++... -.+.|.|.=+|++|.... ++....+ ..+......|..++.||+ + .+-++|.|+|+
T Consensus 48 l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~-----~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 48 IAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKD-----TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp EEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCC-----SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred EEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccc-----cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 445555554 379999999999998753 3333211 111123568999999886 3 57789999996
Q ss_pred --eecCC
Q 019065 324 --WKVDP 328 (346)
Q Consensus 324 --W~~DP 328 (346)
|-.+.
T Consensus 123 eyWDNN~ 129 (156)
T 2eef_A 123 TYWDSNR 129 (156)
T ss_dssp EEEESGG
T ss_pred EEecCCC
Confidence 65543
No 44
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=52.97 E-value=34 Score=27.38 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhh
Q 019065 189 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVT 228 (346)
Q Consensus 189 ~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~ 228 (346)
-||++||.-+--.|-|-.+-...|--+|++|+.||...+.
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~ 65 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVAL 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4788998887777777777888888999888888776655
No 45
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=50.67 E-value=15 Score=45.05 Aligned_cols=73 Identities=10% Similarity=0.179 Sum_probs=44.7
Q ss_pred HHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccc---hhHHHHHHhhCCCceEEEEEEec
Q 019065 191 IDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDK---DEELIAAEESLSGLEVVEIQYSG 263 (346)
Q Consensus 191 ~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li~eK---~~~L~aAe~aLsgL~~VTF~W~g 263 (346)
++.+...|.+.+-+|..++.+|.+.+..|+.|+.+-+..+.|++++-.+- +.||+.|++-++||..=..+|..
T Consensus 2016 l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~ 2091 (3245)
T 3vkg_A 2016 VEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQ 2091 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHH
Confidence 33444444444555555555555555666666666666777777766544 37888888887777555556653
No 46
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=46.03 E-value=32 Score=26.93 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=36.7
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q 019065 190 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAE 234 (346)
Q Consensus 190 e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~ 234 (346)
||+.|++++..--.+..++-.|+.-++.++.-+..|-+.++..-+
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~ 45 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQRE 45 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999888888888888888888888888888888766543
No 47
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.62 E-value=17 Score=35.16 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.8
Q ss_pred CcEEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeecCC
Q 019065 265 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 328 (346)
Q Consensus 265 AksV~VtGSFNnW~~~-------IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~DP 328 (346)
...++++|++++|.-. .+|.+. ....+.|.....+.-| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999988632 122221 1356889888887654 589999998886554
No 48
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=42.03 E-value=62 Score=26.52 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhh
Q 019065 188 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINK 232 (346)
Q Consensus 188 ~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~e 232 (346)
+.+|+.|++++-.-..+..++..|+..++.++.-++.|-+.++..
T Consensus 19 e~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~ 63 (119)
T 3ol1_A 19 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQ 63 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 457788888887777777777777777777777777777766654
No 49
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=41.01 E-value=25 Score=29.99 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=20.0
Q ss_pred EEEeCCe-EEEEEEEECCeeecCCCC
Q 019065 306 VLWLYPG-TYEIKFIVDGQWKVDPQR 330 (346)
Q Consensus 306 tL~LPPG-rYEYKFIVDGeW~~DP~n 330 (346)
++.|..| .|.|+| ++|+|+.+-+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4678899 899999 99999987653
No 50
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=40.67 E-value=26 Score=36.20 Aligned_cols=70 Identities=20% Similarity=0.302 Sum_probs=39.3
Q ss_pred cccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHhhCC
Q 019065 176 DFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLS 252 (346)
Q Consensus 176 ~kdl~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li~eK~~~L~aAe~aLs 252 (346)
.+..-|.+|++-+|-.+| =+..-|.++-+++.||++..-.++-.|. .+..+.+++.+-+.+|++|...|.
T Consensus 297 kqrqeee~r~~qew~~~h---p~~~Aer~~e~a~ael~~a~k~~a~~~e----r~~~t~~~~~~~~~~~~~~n~~~~ 366 (551)
T 2b5u_A 297 KQRQDEENRRQQEWDATH---PVEAAERNYERARAELNQANEDVARNQE----RQAKAVQVYNSRKSELDAANKTLA 366 (551)
T ss_dssp HHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHhhhhHHH
Confidence 344455555544443222 1233445566666666655444433333 455778888888888888877654
No 51
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=40.33 E-value=8.5 Score=29.33 Aligned_cols=15 Identities=40% Similarity=0.846 Sum_probs=12.3
Q ss_pred ECCeeecCCCCCeec
Q 019065 320 VDGQWKVDPQRESVT 334 (346)
Q Consensus 320 VDGeW~~DP~nPtVt 334 (346)
|||+|.+||.-.+.+
T Consensus 48 vdgeWsYD~ATkTFT 62 (65)
T 1mhx_A 48 VDGEWTYDDAAKTFT 62 (65)
T ss_dssp CCSEEEEETTTTEEE
T ss_pred CccEEEecCceeEEE
Confidence 589999999887653
No 52
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=39.35 E-value=50 Score=25.71 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=40.8
Q ss_pred ccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHH-Hhhhhh--hhhhhhhhhcccc
Q 019065 173 EGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTKAV--TEINKAEKLISDK 240 (346)
Q Consensus 173 ~d~~kdl~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~-Lq~kae--~~i~ea~~li~eK 240 (346)
+.++..+.++-.+ ...++..+...+...|-++.++|.+++.--.+.+. |-.|+. .+|+-=++|+++.
T Consensus 13 ~~Le~~l~e~E~~-~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLEGE 82 (86)
T 1x8y_A 13 AAKEAKLRDLEDS-LARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGE 82 (86)
T ss_dssp TTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCC
Confidence 3455555555555 46677777777777788888887776655444432 334443 3666666666543
No 53
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=38.65 E-value=43 Score=27.31 Aligned_cols=65 Identities=18% Similarity=0.209 Sum_probs=41.4
Q ss_pred eEEEEEEecC--CcEEEEEee--eCCCcc-ccccCCCCCCCccccccccCCCcEEEEEEeCCe-EEEEEEEECCe
Q 019065 255 EVVEIQYSGD--GEIVEVAGS--FNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ 323 (346)
Q Consensus 255 ~~VTF~W~g~--AksV~VtGS--FNnW~~-~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG-rYEYKFIVDGe 323 (346)
..-+++...= .|.|.|.=+ |++|.. .....-.+.. ......-..|...+.||+. .+-.+|.|+|+
T Consensus 21 l~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~----~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 21 FSGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSG----PISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp EEEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEE----ECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred EEEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEec----CCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 3444555542 688888878 999987 4222111000 0112345789999999876 68889999996
No 54
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=38.25 E-value=21 Score=33.36 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=37.3
Q ss_pred CcEEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCeeec
Q 019065 265 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKV 326 (346)
Q Consensus 265 AksV~VtGSFNnW~~--~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW~~ 326 (346)
...++|+|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||.-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 578999999987643 34565432 257899999999876 6799988766543
No 55
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=35.71 E-value=11 Score=28.58 Aligned_cols=15 Identities=40% Similarity=0.784 Sum_probs=11.9
Q ss_pred ECCeeecCCCCCeec
Q 019065 320 VDGQWKVDPQRESVT 334 (346)
Q Consensus 320 VDGeW~~DP~nPtVt 334 (346)
|||+|.+||.-.+.+
T Consensus 44 vdgew~yd~atktft 58 (61)
T 1igd_A 44 VDGVWTYDDATKTFT 58 (61)
T ss_dssp CCCEEEEETTTTEEE
T ss_pred CCceEeecCceeEEE
Confidence 589999999877643
No 56
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=34.78 E-value=8.1 Score=28.86 Aligned_cols=14 Identities=36% Similarity=0.857 Sum_probs=11.0
Q ss_pred ECCeeecCCCCCee
Q 019065 320 VDGQWKVDPQRESV 333 (346)
Q Consensus 320 VDGeW~~DP~nPtV 333 (346)
|||+|.+||.-.+.
T Consensus 39 vdgeW~YD~ATkTF 52 (56)
T 3fil_A 39 VDGEWTYDDATKTF 52 (56)
T ss_dssp CCCEEEEEGGGTEE
T ss_pred CccEEEecCceeEE
Confidence 58999999876654
No 57
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=31.15 E-value=95 Score=27.93 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=17.2
Q ss_pred cccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHH
Q 019065 172 VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIE 213 (346)
Q Consensus 172 ~~d~~kdl~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el~ 213 (346)
|+.++..-.++....-+.+++.++..+.+-+-++..++.+++
T Consensus 59 L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~ 100 (341)
T 3fpp_A 59 LGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYS 100 (341)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred EEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444333333333334444444444444444444443333
No 58
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=29.41 E-value=1e+02 Score=29.44 Aligned_cols=55 Identities=7% Similarity=-0.018 Sum_probs=31.6
Q ss_pred HHHhhHHHHHHhHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhcccchhHHHHHHh
Q 019065 195 KFMLHQKEMELSRLKEQIEKEKLALSVLQT---KAVTEINKAEKLISDKDEELIAAEE 249 (346)
Q Consensus 195 k~mlh~kElel~~~K~el~~~k~~Ls~Lq~---kae~~i~ea~~li~eK~~~L~aAe~ 249 (346)
..|.++.|-+..++++..+++.-++..+.. +.+.+|.+..+.|.++.+++..|..
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (487)
T 3oja_A 420 EEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVV 477 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHH
Confidence 335555555555666665555555555544 3334666666666666666666544
No 59
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=29.12 E-value=1.3e+02 Score=23.18 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=31.1
Q ss_pred hHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHH-Hhhhhh--hhhhhhhhhcccchh
Q 019065 180 SEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTKAV--TEINKAEKLISDKDE 242 (346)
Q Consensus 180 ~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~-Lq~kae--~~i~ea~~li~eK~~ 242 (346)
.++..+ .+.++..+...+..-|-++.++|.+++.--.+.+. |-.|+. .+|+-=++|+++...
T Consensus 18 ~e~e~~-~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLLEGEe~ 82 (84)
T 1gk4_A 18 REMEEN-FAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEES 82 (84)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCcc
Confidence 334333 34455556666666666666666665544433332 333333 366666666665443
No 60
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=28.86 E-value=17 Score=28.53 Aligned_cols=15 Identities=40% Similarity=0.855 Sum_probs=11.6
Q ss_pred ECCeeecCCCCCeec
Q 019065 320 VDGQWKVDPQRESVT 334 (346)
Q Consensus 320 VDGeW~~DP~nPtVt 334 (346)
|||+|.+||.-.+.+
T Consensus 58 vdgeWsYD~ATkTFT 72 (75)
T 2rpv_A 58 VDGEWTYDDATKTFT 72 (75)
T ss_dssp CCSEEEEETTTTEEE
T ss_pred CCceEeecCceeEEE
Confidence 589999998877643
No 61
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=28.59 E-value=1.7e+02 Score=22.41 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHH-Hhhhh--hhhhhhhhhhcccchhHH
Q 019065 189 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTKA--VTEINKAEKLISDKDEEL 244 (346)
Q Consensus 189 ~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~-Lq~ka--e~~i~ea~~li~eK~~~L 244 (346)
.|...+..++...|-++.++|.+++.--.+.+. |-.|+ +.+|+-=++|++....++
T Consensus 5 ~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLEGEe~Rl 63 (74)
T 2xv5_A 5 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 63 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 456777788888888888888887766555443 44444 447888888888776655
No 62
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=28.40 E-value=68 Score=32.21 Aligned_cols=49 Identities=10% Similarity=0.046 Sum_probs=32.9
Q ss_pred EEEEEEecC-CcEEEEEeeeCCCccccccCCCCCCCccccccccCCC---cEEEEEEeCCeEEEEEEEE
Q 019065 256 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSR---LWSTVLWLYPGTYEIKFIV 320 (346)
Q Consensus 256 ~VTF~W~g~-AksV~VtGSFNnW~~~IpL~Kd~s~s~~a~~~skesG---~FsttL~LPPGrYEYKFIV 320 (346)
.+.|+-..+ ...|.+.|. ..+||.+.. ..+ .|.+.++.+..+..|+|.|
T Consensus 126 ~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~-----------~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 126 HVLLRTQKGVIKGATFLGE-----KHVPMRKKA-----------SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEETTTEEEEEEESS-----SEEECEEEE-----------ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred EEEEEcccCCcceEEEeCC-----CEEEEEEEe-----------cCCCeEEEEEEEECCCCceEEEEEE
Confidence 444444333 677777753 457898741 233 5888998888888999988
No 63
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=26.95 E-value=20 Score=26.86 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=13.4
Q ss_pred EEEEC-CeeecCCCCCeec
Q 019065 317 KFIVD-GQWKVDPQRESVT 334 (346)
Q Consensus 317 KFIVD-GeW~~DP~nPtVt 334 (346)
..-|| |+|.+|+.-++.+
T Consensus 35 ~n~~d~geWtYddaTKTFT 53 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKTFT 53 (56)
T ss_pred hcCCcCCeeEecCcceeEE
Confidence 34567 9999999877643
No 64
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=26.89 E-value=35 Score=27.69 Aligned_cols=18 Identities=22% Similarity=0.586 Sum_probs=13.8
Q ss_pred CeEEEEEEEECCeeecCCCC
Q 019065 311 PGTYEIKFIVDGQWKVDPQR 330 (346)
Q Consensus 311 PGrYEYKFIVDGeW~~DP~n 330 (346)
.| |+|.|. +|.|+++-+.
T Consensus 67 sG-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 67 GG-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp CE-EEEEEE-TTEEEETTTC
T ss_pred Cc-eeeeec-CCEEEECCCC
Confidence 35 888885 8999987654
No 65
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=26.77 E-value=89 Score=28.39 Aligned_cols=11 Identities=36% Similarity=0.356 Sum_probs=5.3
Q ss_pred hHHHHHHhhCC
Q 019065 242 EELIAAEESLS 252 (346)
Q Consensus 242 ~~L~aAe~aLs 252 (346)
..|..|+..|.
T Consensus 143 ~~l~~a~~~l~ 153 (369)
T 4dk0_A 143 IEVNTAETNLG 153 (369)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhh
Confidence 44555555443
No 66
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=25.60 E-value=64 Score=23.31 Aligned_cols=11 Identities=45% Similarity=0.854 Sum_probs=4.8
Q ss_pred EeCCe-EEEEEE
Q 019065 308 WLYPG-TYEIKF 318 (346)
Q Consensus 308 ~LPPG-rYEYKF 318 (346)
.++|| .++|.|
T Consensus 55 ~~~~g~~~~~~f 66 (91)
T 1bxv_A 55 AFSPGETFEATF 66 (91)
T ss_dssp ECSTTCEEEEEC
T ss_pred eeCCCCEEEEEe
Confidence 34444 344444
No 67
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=25.46 E-value=17 Score=28.95 Aligned_cols=15 Identities=40% Similarity=0.784 Sum_probs=12.3
Q ss_pred ECCeeecCCCCCeec
Q 019065 320 VDGQWKVDPQRESVT 334 (346)
Q Consensus 320 VDGeW~~DP~nPtVt 334 (346)
|||+|.+||.-.+.+
T Consensus 52 vdgeWsYD~ATkTFT 66 (83)
T 1pgx_A 52 VDGVWTYDDATKTFT 66 (83)
T ss_dssp CCEEEEEETTTTEEE
T ss_pred CCceEeecccceeEE
Confidence 589999999887754
No 68
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=25.04 E-value=1.7e+02 Score=26.59 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=52.5
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcccch-----hHHHHHHhhCC
Q 019065 189 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD-----EELIAAEESLS 252 (346)
Q Consensus 189 ~e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li~eK~-----~~L~aAe~aLs 252 (346)
.|+..|+..+...+-++..++.++.+..|...-++.+++.+..++.+-..++- +-+|.-+.||.
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~ 127 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALK 127 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 56677888888888888888888888888999999999999999988887773 67777777765
No 69
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=24.68 E-value=1.5e+02 Score=26.93 Aligned_cols=36 Identities=28% Similarity=0.283 Sum_probs=29.7
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHhhh
Q 019065 190 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTK 225 (346)
Q Consensus 190 e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq~k 225 (346)
|...|..+|..|+.|+..+++||+..|......+..
T Consensus 28 En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~ 63 (190)
T 4emc_A 28 ENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQ 63 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 448899999999999999999999988888544433
No 70
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=24.63 E-value=90 Score=30.33 Aligned_cols=6 Identities=0% Similarity=0.041 Sum_probs=2.2
Q ss_pred HHHHHH
Q 019065 207 RLKEQI 212 (346)
Q Consensus 207 ~~K~el 212 (346)
+++.++
T Consensus 527 ~~~~~~ 532 (597)
T 3oja_B 527 ARRTEA 532 (597)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 333333
No 71
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=24.62 E-value=44 Score=29.25 Aligned_cols=49 Identities=18% Similarity=0.265 Sum_probs=32.8
Q ss_pred cEEEEEeee--CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeEEEEEEEECCee
Q 019065 266 EIVEVAGSF--NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 324 (346)
Q Consensus 266 ksV~VtGSF--NnW~~~--IpL~Kd~s~s~~a~~~skesG~FsttL~LPPGrYEYKFIVDGeW 324 (346)
..|+|+|+- ++|... .+|+... ...+.|.....|..|.+.++|..+.-|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~----------t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPA----------TKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCS----------STTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeecc----------CCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 469999984 688754 3344311 257888888899999877766554333
No 72
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=24.51 E-value=1.6e+02 Score=26.36 Aligned_cols=26 Identities=15% Similarity=0.127 Sum_probs=9.9
Q ss_pred HhHHHHHHHHHHHHHHHHhhhhhhhh
Q 019065 205 LSRLKEQIEKEKLALSVLQTKAVTEI 230 (346)
Q Consensus 205 l~~~K~el~~~k~~Ls~Lq~kae~~i 230 (346)
+..++.+++..+..|..+++..+.++
T Consensus 127 l~~~~~~l~~~~~~l~~~~~~~~~~~ 152 (256)
T 3na7_A 127 QEDLKKEMLELEKLALELESLVENEV 152 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334433333333333
No 73
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=24.51 E-value=75 Score=24.02 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=20.8
Q ss_pred HHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHh
Q 019065 191 IDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 223 (346)
Q Consensus 191 ~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq 223 (346)
|..|......-+.+..+++.+.+..+..|+.|+
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555665555556666667777666666666554
No 74
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=24.41 E-value=1.1e+02 Score=20.43 Aligned_cols=27 Identities=37% Similarity=0.539 Sum_probs=16.6
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHh
Q 019065 190 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 223 (346)
Q Consensus 190 e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~Lq 223 (346)
||+.||. |+.-+|.||+..|.++++|.
T Consensus 3 eiaalkq-------eiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 3 EIAALKQ-------EIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 5555553 34456777777777776653
No 75
>4abm_A Charged multivesicular BODY protein 4B; cell cycle, protein transport, HIV-1; 1.80A {Homo sapiens}
Probab=24.13 E-value=1e+02 Score=23.80 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=23.6
Q ss_pred HHhHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 019065 204 ELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLI 237 (346)
Q Consensus 204 el~~~K~el~~~k~~Ls~Lq~kae~~i~ea~~li 237 (346)
++.+++.+++..+---..|+.+++.++..|.+.+
T Consensus 7 AI~~Lr~~~d~L~kkq~~L~~~i~~e~~~Ak~~~ 40 (79)
T 4abm_A 7 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHG 40 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666677777777777787777
No 76
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=23.05 E-value=28 Score=27.35 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=16.6
Q ss_pred eeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCe
Q 019065 272 GSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG 312 (346)
Q Consensus 272 GSFNnW~~~IpL~Kd~s~s~~a~~~skesG~FsttL~LPPG 312 (346)
|||.+|+++ .|+- ..+.-++.+.+|.|
T Consensus 1 ~~~s~W~qP-~lk~-------------~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQP-ELES-------------DEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCCC-EEEE-------------ETTEEEEEEECCSS
T ss_pred CCcccccCc-eeec-------------CCCCceEEEeCCCC
Confidence 899999875 4543 35677788888887
No 77
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=22.48 E-value=1.6e+02 Score=26.70 Aligned_cols=7 Identities=29% Similarity=0.406 Sum_probs=3.1
Q ss_pred CcEEEEE
Q 019065 265 GEIVEVA 271 (346)
Q Consensus 265 AksV~Vt 271 (346)
|..|.|.
T Consensus 211 G~~v~v~ 217 (369)
T 4dk0_A 211 GQDVTFT 217 (369)
T ss_dssp SCCCCEE
T ss_pred CCeEEEE
Confidence 3444444
No 78
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=22.06 E-value=90 Score=25.19 Aligned_cols=68 Identities=18% Similarity=0.149 Sum_probs=33.6
Q ss_pred CCCcccccccCCccccCCCCCCCc-ccCC-cccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHH
Q 019065 144 NGSALTSKQIASFATVNHPLSEDH-LGTG-VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQI 212 (346)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~d~-~~~~-~~d~~kdl~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el 212 (346)
-|+++---+|+|...... |+.+- -|.+ .-++..+|-+|....|.+||+-..++|.|-.-.|.-+.+++
T Consensus 9 vGsSSRDv~V~P~G~~~~-lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~ 78 (90)
T 4b6x_A 9 IGSSSRDVQVCPRGAGAA-LRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRF 78 (90)
T ss_dssp -------------CTTHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccceeeccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 366666677777764211 11000 0111 11478888888888899999999888887766666655554
No 79
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=21.96 E-value=50 Score=31.28 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=19.7
Q ss_pred CCeEEEEEEEECCeee---cCCCCCeec
Q 019065 310 YPGTYEIKFIVDGQWK---VDPQRESVT 334 (346)
Q Consensus 310 PPGrYEYKFIVDGeW~---~DP~nPtVt 334 (346)
+.|.|.++|..+|+|+ .|+.-|+..
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~~ 147 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTKD 147 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEET
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCcccC
Confidence 5699999999999996 566666644
No 80
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=21.73 E-value=62 Score=25.89 Aligned_cols=19 Identities=26% Similarity=0.555 Sum_probs=14.3
Q ss_pred EeCCeEEEEEEEECCeeec
Q 019065 308 WLYPGTYEIKFIVDGQWKV 326 (346)
Q Consensus 308 ~LPPGrYEYKFIVDGeW~~ 326 (346)
..+||+|.-.-+|+|+|+-
T Consensus 27 ~~~PG~Y~vdI~vN~~~~~ 45 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGYMA 45 (125)
T ss_dssp SSCSEEEEEEEEETTEEEE
T ss_pred CcCCcEEEEEEEECCeEcc
Confidence 3578888888888887764
No 81
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=20.36 E-value=2.2e+02 Score=23.99 Aligned_cols=28 Identities=21% Similarity=0.381 Sum_probs=13.6
Q ss_pred HHHHHHhhHHHHHHhHHHHHHHHHHHHH
Q 019065 192 DHLKFMLHQKEMELSRLKEQIEKEKLAL 219 (346)
Q Consensus 192 ~~lk~mlh~kElel~~~K~el~~~k~~L 219 (346)
+.|...+..++-|+-.+|.+|...+..+
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~ 105 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKA 105 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555554444444444
No 82
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=20.21 E-value=3e+02 Score=22.40 Aligned_cols=59 Identities=25% Similarity=0.380 Sum_probs=32.3
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHH-----------HhhhhhhhhhhhhhhcccchhHHHHHH
Q 019065 190 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-----------LQTKAVTEINKAEKLISDKDEELIAAE 248 (346)
Q Consensus 190 e~~~lk~mlh~kElel~~~K~el~~~k~~Ls~-----------Lq~kae~~i~ea~~li~eK~~~L~aAe 248 (346)
++++|+..+.-.+.++.+++.+|.+++..-.. |+..-+.=-.+|++++..-+.....++
T Consensus 13 ~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e~~~~e 82 (97)
T 2eqb_B 13 DYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIE 82 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666666666777777777666665533222 222222245678887764443333333
No 83
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=20.18 E-value=78 Score=24.66 Aligned_cols=35 Identities=31% Similarity=0.487 Sum_probs=22.1
Q ss_pred hHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHH
Q 019065 180 SEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEK 216 (346)
Q Consensus 180 ~ea~~~~n~~e~~~lk~mlh~kElel~~~K~el~~~k 216 (346)
.|..++ +.-|+.|...|.+||.++.+++++|-+-+
T Consensus 33 eELr~k--d~~I~eLEk~L~ekd~eI~~LqseLDKfr 67 (72)
T 3nmd_A 33 EELRQR--DALIDELELELDQKDELIQMLQNELDKYR 67 (72)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444 33467777777777777777777765544
No 84
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=20.13 E-value=1.5e+02 Score=25.88 Aligned_cols=11 Identities=18% Similarity=0.434 Sum_probs=6.2
Q ss_pred eEEEEEEEECC
Q 019065 312 GTYEIKFIVDG 322 (346)
Q Consensus 312 GrYEYKFIVDG 322 (346)
+.|.+++.+|.
T Consensus 229 ~~~~v~i~~~~ 239 (277)
T 2f1m_A 229 GSITLRAIFPN 239 (277)
T ss_dssp CEEEEEEEECC
T ss_pred cEEEEEEEecC
Confidence 45666666653
No 85
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=20.08 E-value=2.2e+02 Score=27.66 Aligned_cols=25 Identities=16% Similarity=0.053 Sum_probs=19.4
Q ss_pred chhHHHHHHhhCCCceEEEEEEecC
Q 019065 240 KDEELIAAEESLSGLEVVEIQYSGD 264 (346)
Q Consensus 240 K~~~L~aAe~aLsgL~~VTF~W~g~ 264 (346)
++.+|+-.-..+.|-+.|..+++..
T Consensus 46 ~rr~l~n~~~elkgnIrV~vRvRP~ 70 (403)
T 4etp_A 46 VRRTLHNELQELRGNIRVYLRIRPA 70 (403)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 3566776667788999999999874
Done!