Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>019070
MAVLNYIPVTATSAPISQDSSSTSSSVPTTRPTKILLPKKKSMKWSTGVAPGEYGGPPTT
TKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRLIEDTDESSAEKFPVQEEPSGFLSLNRV
MSLDSLEVDLSKELTADSKTALQQPVEAAIQDSQQKSGSVPRKWRLAPTRREQDKWDKAT
KAATGGSDVMFRELRKPRGDPEVLAAQSKEQYFKLKSKLQFLTLGIGGVGLVSAYISYSP
EIAASFAAGLLGSLVYIRMLGSTVDSMAAGAKGLMKGAVGQPRLLVPVVLVMIYNRWNEI
TVPEYGFLHLELIPMLVGFFTYKIATFFQAVEEAVSIVEKKDPDIV

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019070
        (346 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052836 - symbol:AT2G31040 species:3702 "Arabi...  1072  1.9e-108  1


>TAIR|locus:2052836 [details] [associations]
            symbol:AT2G31040 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0000023 "maltose
            metabolic process" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] [GO:0043085 "positive regulation of
            catalytic activity" evidence=RCA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004669 KO:K02116 EMBL:AC005311
            EMBL:AY050461 EMBL:AY090339 IPI:IPI00533182 PIR:G84715
            RefSeq:NP_565711.1 UniGene:At.12965 UniGene:At.66349 IntAct:O82279
            STRING:O82279 PaxDb:O82279 PRIDE:O82279 EnsemblPlants:AT2G31040.1
            GeneID:817656 KEGG:ath:AT2G31040 TAIR:At2g31040 eggNOG:NOG306297
            HOGENOM:HOG000243524 InParanoid:O82279 OMA:TYKIATF PhylomeDB:O82279
            ProtClustDB:CLSN2688587 ArrayExpress:O82279 Genevestigator:O82279
            Uniprot:O82279
        Length = 350

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 203/314 (64%), Positives = 245/314 (78%)

Query:    34 KILLPKKKSMKWSTGVAPGEYGGPPTTTKLRKFWGGEKEDPLTSDEFIWNNDFMPRMKRL 93
             KI+LP KK  KWSTGVAPGEYGGPPTTTKLRK+WGGEKEDP+TS + IWN DFM +MK+L
Sbjct:    29 KIILPNKKPEKWSTGVAPGEYGGPPTTTKLRKYWGGEKEDPITSTDLIWNRDFMDQMKKL 88

Query:    94 IEDTDESSAEKFPVQEEPSGFLSLNRVMSLDSLEVDLSKELTADSKTALQQPVEAAIQDS 153
              +D ++SS +  P +E+ SGFLS +RVMSLDS++VDLSKEL + SK+ ++  ++ +  ++
Sbjct:    89 FDDPNDSSLDPSPSKEKSSGFLSFSRVMSLDSMDVDLSKELASSSKSVVKNRLDTSKSEA 148

Query:   154 --QQKSGSVPRKWRLAPTRREQDKWDKATKAATGGSDVMFRELRKPRGDPEVLAAQSKEQ 211
               Q     V  KW+LAPTRREQ+KWD+ATKAATGGSDVMFRELR+PRGDPEV AA+ +EQ
Sbjct:   149 KKQMSKAIVSPKWKLAPTRREQEKWDRATKAATGGSDVMFRELRRPRGDPEVQAAKDREQ 208

Query:   212 YFKLKSKLQFLTLGIGGVGLVSAYISYSPEIXXXXXXXXXXXXVYIRMLGSTVDSXXXXX 271
             YFKLK+K+Q LTLGIGGVGLVSAYISY+PEI             Y+RMLG++VD+     
Sbjct:   209 YFKLKNKIQVLTLGIGGVGLVSAYISYTPEIALSFGAGLLGSLAYMRMLGNSVDAMADGA 268

Query:   272 XXXXXXXXXQPRLLVPVVLVMIYNRWNEITVPEYGFLHLELIPMLVGFFTYKIATFFQAV 331
                      QPRLLVPVVLVMI+NRWN I VPEYGF+HLELIPMLVGFFTYKIATFFQA+
Sbjct:   269 RGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQAI 328

Query:   332 EEAVSIVEKKDPDI 345
             EEA+SI  +K   I
Sbjct:   329 EEAISITTQKPESI 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      346       298   0.00094  115 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  592 (63 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.88u 0.11s 25.99t   Elapsed:  00:00:01
  Total cpu time:  25.88u 0.11s 25.99t   Elapsed:  00:00:01
  Start:  Fri May 10 19:33:35 2013   End:  Fri May 10 19:33:36 2013

Back to top