BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019075
(346 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/342 (73%), Positives = 298/342 (87%)
Query: 5 SEVLSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMS 64
+E +SNKQVILKNYV G+PKE+DM +K +I LKV EGSN ++VKNLYLSCDPYMR+RM
Sbjct: 2 AEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRMR 61
Query: 65 FNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIH 124
+ SF PGSPI G+GVAKV++SG P+F+KGDLVWG TGWEEYS+I Q LFKIH
Sbjct: 62 KIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIH 121
Query: 125 HTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYV 184
DVPLSYYTGILGMPGMTA+AGF+E+C+PKKGE ++VSAASGAVGQLVGQFAK++GCYV
Sbjct: 122 DKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYV 181
Query: 185 VGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLL 244
VGSAGS+EKV+LLK+KFGFD+AFNYKEE DL AALKR FP+GIDIYFE+VGGKMLDAVL+
Sbjct: 182 VGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLV 241
Query: 245 NMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 304
NM+L+GRIA CGMISQYNL Q EGVHNL ++ KRIRMEGF+VFDY+ Y ++L+ V+P
Sbjct: 242 NMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQ 301
Query: 305 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 346
I+ GKVVYVEDVA GLE+AP ALVGLFSGRN+GKQ+V+VSRE
Sbjct: 302 IKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 241/343 (70%), Positives = 292/343 (85%), Gaps = 6/343 (1%)
Query: 9 SNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
+NKQVILK+YV GFP E+D +++ L+V EG+N++LVKNLYLSCDPYMR RM D
Sbjct: 4 TNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMG-KPD 62
Query: 69 PDFSS----FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKN-PQGLFKI 123
P ++ +TPG PI+G+GV+++++SGHP++KKGDL+WG WEEYS+I FKI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 124 HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCY 183
HTDVPLSYYTG+LGMPGMTA+AGFYE+C+PK+GE +YVSAASGAVGQLVGQ AK+MGCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182
Query: 184 VVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVL 243
VVGSAGS+EKV+LLK KFGFDDAFNYKEE+DL AALKRCFP GIDIYFE+VGGKMLDAVL
Sbjct: 183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVL 242
Query: 244 LNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLP 303
+NM +HGRIA CGMISQYNL EGVHNL N++YKR R++GFVV D++ +YS+FL+ VLP
Sbjct: 243 VNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLP 302
Query: 304 YIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 346
+IREGK+ YVEDVADGLE AP ALVGLF G+NVGKQ+VVV+RE
Sbjct: 303 HIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 187/339 (55%), Gaps = 15/339 (4%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
N+Q L G P + + E ILVKN YLS DP MR M+
Sbjct: 8 NRQYQLAQRPSGLPGRDTFSFVETPLG---EPAEGQILVKNEYLSLDPAMRGWMN----- 59
Query: 70 DFSSFTP----GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
D S+ P G + GV KV+ S HP F+ GD V G G ++Y I P+G +K+
Sbjct: 60 DARSYIPPVGIGEVMRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDP 118
Query: 126 TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVV 185
+ PL Y LGM GMTA+ ++ PK GE + +S A+GAVG + GQ A+L GC VV
Sbjct: 119 SRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVV 178
Query: 186 GSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLN 245
G AG EK L + GFD A +YK E DL A LKR P+GID++F++VGG++LD VL
Sbjct: 179 GIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTR 237
Query: 246 MRLHGRIAACGMISQYNLSQP-EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPY 304
+ RI CG ISQYN + G N ++++ R RMEG VV DY ++ L + +
Sbjct: 238 IAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATW 297
Query: 305 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVV 343
+ EGK+ ED+ +GLE P L+ LFSG N GK ++ V
Sbjct: 298 LAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 200/338 (59%), Gaps = 20/338 (5%)
Query: 11 KQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQDP 69
K LK + +G P ++D +K + LK E +L++ L+LS DPYMR
Sbjct: 9 KSWTLKKHFQGKPTQSDFELKTVELPPLKNGE----VLLEALFLSVDPYMRIASK----- 59
Query: 70 DFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHHT--- 126
G+ + G VA+VV+S + F G +V +GW + I + +GL K+
Sbjct: 60 ---RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTH-FISDGKGLEKLLTEWPD 115
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G E+C K GE + VSAA+GAVG +VGQ AKL GC VVG
Sbjct: 116 KLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG 175
Query: 187 SAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 246
+AGS EK+ LK + GFD AFNYK N L+ ALK+ P+G D YF++VGG+ L+ VL M
Sbjct: 176 AAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQM 234
Query: 247 RLHGRIAACGMISQYN-LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQY-SRFLDAVLPY 304
+ G+IA CG IS YN + Q + +++YK++R+EGF+V+ + + L ++ +
Sbjct: 235 KDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKW 294
Query: 305 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVV 342
+ EGK+ Y E V G EN PAA + + +G N+GK +V
Sbjct: 295 VLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 190/337 (56%), Gaps = 18/337 (5%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
K LK + G+P +D +K S + LK + +L++ L+L+ DPYMR
Sbjct: 3 TKTWTLKKHFVGYPTNSDFELKTSELPPLK----NGEVLLEALFLTVDPYMRVAAK---- 54
Query: 69 PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
G + G VAKVV+S + KG +V + GW +S+ K+ + L
Sbjct: 55 ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 110
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G EIC K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 111 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 170
Query: 187 SAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 246
+ GS EKV L+ K GFD FNYK L+ LK+ P+G D YF++VGG+ + V+ M
Sbjct: 171 AVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQM 229
Query: 247 RLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQYSRFLDAVLPY 304
+ GRIA CG IS YN + P V+Y+ +RME FVV+ + + L +L +
Sbjct: 230 KKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKW 289
Query: 305 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 341
+ EGK+ Y E + +G EN PAA +G+ G N+GK +V
Sbjct: 290 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 190/337 (56%), Gaps = 18/337 (5%)
Query: 10 NKQVILKNYVEGFPKETDMLVKASSIS-LKVEEGSNAILVKNLYLSCDPYMRARMSFNQD 68
K LK + G+P +D +K S + LK E +L++ L+L+ DPYMR
Sbjct: 24 TKTWTLKKHFVGYPTNSDFELKTSELPPLKNGE----VLLEALFLTVDPYMRVAAK---- 75
Query: 69 PDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHT 126
G + G VAKVV+S + KG +V + GW +S+ K+ + L
Sbjct: 76 ----RLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 131
Query: 127 DVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVG 186
+PLS G +GMPG+TA+ G EIC K GE + V+AA+GAVG +VGQ AKL GC VVG
Sbjct: 132 TIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVG 191
Query: 187 SAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNM 246
+ GS EKV L+ K GFD FNYK L+ LK+ P+G D YF++VGG+ + V+ M
Sbjct: 192 AVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQM 250
Query: 247 RLHGRIAACGMISQYNLSQPEGVHNLMN-VVYKRIRMEGFVVFDYF-PQYSRFLDAVLPY 304
+ GRIA CG IS YN + P V+Y+ +RME FVV+ + + L +L +
Sbjct: 251 KKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQKALKDLLKW 310
Query: 305 IREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLV 341
+ EGK+ Y E + +G EN PAA +G+ G N+GK +V
Sbjct: 311 VLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 165/318 (51%), Gaps = 25/318 (7%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
+ V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V
Sbjct: 45 VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 102
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
+ +I + L K+ D LSY+ G +GMPG+T+ G E G +
Sbjct: 103 TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 162
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDA 217
+ VS A+GA G + GQ +GC VVG G+ EK LL ++ GFD A NYK++N +
Sbjct: 163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQ 222
Query: 218 ALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP---------EG 268
+ C P G+D+YF++VGG + D V+ M + I CG ISQYN P E
Sbjct: 223 LRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEA 281
Query: 269 VHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALV 328
+ N+ +R F+V +Y ++ + + + +EGK+ E V +GLEN AA
Sbjct: 282 IQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQ 336
Query: 329 GLFSGRNVGKQLVVVSRE 346
+ +G N+GKQ+V +S E
Sbjct: 337 SMMTGGNIGKQIVCISEE 354
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 165/318 (51%), Gaps = 25/318 (7%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLV 102
+ V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V
Sbjct: 40 VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFV 97
Query: 103 WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--E 158
+ +I + L K+ D LSY+ G +GMPG+T+ G E G +
Sbjct: 98 TSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNK 157
Query: 159 YIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDA 217
+ VS A+GA G + GQ +GC VVG G+ EK LL ++ GFD A NYK++N +
Sbjct: 158 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQ 217
Query: 218 ALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP---------EG 268
+ C P G+D+YF++VGG + D V+ M + I CG ISQYN P E
Sbjct: 218 LRESC-PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEA 276
Query: 269 VHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAALV 328
+ N+ +R F+V +Y ++ + + + +EGK+ E V +GLEN AA
Sbjct: 277 IQKERNITRER-----FLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQ 331
Query: 329 GLFSGRNVGKQLVVVSRE 346
+ +G N+GKQ+V +S E
Sbjct: 332 SMMTGGNIGKQIVCISEE 349
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 167/320 (52%), Gaps = 29/320 (9%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV-- 102
+ V+ LYLS DPYMR +M+ + D+ + + +G G+ V +S H + KGD V
Sbjct: 41 VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTS 100
Query: 103 --WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG- 157
W W+ +++ + GL K+ D LSY+ G +GMPG+T+ G E G
Sbjct: 101 FYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGS 156
Query: 158 -EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVELLKNKFGFDDAFNYKEENDL 215
+ + VS A+GA G L GQ L+GC VVG G++EK L ++ GFD A NYK N +
Sbjct: 157 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGN-V 215
Query: 216 DAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN---------LSQP 266
L+ P G+D+YF++VGG + +AV+ M + I CG ISQY+
Sbjct: 216 AEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAV 275
Query: 267 EGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDVADGLENAPAA 326
E + N+ +R F V +Y ++ + + + +EGK+ E +A GLEN A
Sbjct: 276 EAIRKERNITRER-----FTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVA 330
Query: 327 LVGLFSGRNVGKQLVVVSRE 346
+ +G NVGKQ+V +S +
Sbjct: 331 FQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 170/345 (49%), Gaps = 31/345 (8%)
Query: 21 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSP 79
G P + V+ S+ + EG + V+ LYLS DPY R + + + D+ + +
Sbjct: 28 GNPVAENFRVEEFSLLDALNEGQ--VQVRTLYLSVDPYXRCKXNEDTGTDYLAPWQLAQV 85
Query: 80 IEGFGVAKVVDSGHPEFKKGDLV----WGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYY 133
+G G+ V +S H + KGD V W W+ +++ + GL K+ D LSY+
Sbjct: 86 ADGGGIGIVEESKHQKLAKGDFVTSFYWP---WQTKAIL-DGNGLEKVDPQLVDGHLSYF 141
Query: 134 TGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGS 190
G +G PG+T+ G E G + VS A+GA G L GQ L+GC VVG G+
Sbjct: 142 LGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGT 201
Query: 191 REKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHG 250
+EK L ++ GFD A NYK N + L+ P G+D+YF++VGG + + V+ +
Sbjct: 202 QEKCLFLTSELGFDAAVNYKTGN-VAEQLREACPGGVDVYFDNVGGDISNTVISQXNENS 260
Query: 251 RIAACGMISQYN---------LSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAV 301
I CG ISQYN E + N+ +R F V +Y ++ + +
Sbjct: 261 HIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRER-----FTVLNYKDKFEPGILQL 315
Query: 302 LPYIREGKVVYVEDVADGLENAPAALVGLFSGRNVGKQLVVVSRE 346
+ +EGK+ E VA GLEN A +G NVGKQ+V +S +
Sbjct: 316 SQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNK 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK LK+
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 214
Query: 201 FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQ 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + GR+ G IS
Sbjct: 215 LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 273
Query: 261 YNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE 314
Y P G+ + ++ K ++GF + Y +Y + +L G +V
Sbjct: 274 YQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 331
Query: 315 DVAD--------GLENAPAALVGLFSGRNVGKQLV 341
D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 332 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 366
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNK 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK LK+
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 185
Query: 201 FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQ 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + GR+ G IS
Sbjct: 186 LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 244
Query: 261 YNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE 314
Y P G+ + ++ K ++GF + Y +Y + +L G +V
Sbjct: 245 YQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 302
Query: 315 DVAD--------GLENAPAALVGLFSGRNVGKQLV 341
D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 303 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 337
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNK 200
G TA+ E+ +G+ + V+AA+G GQ Q +K C+V+G+ S EK LK+
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 206
Query: 201 FGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQ 260
G D NYK E + LK+ +PEG+D+ +E VGG M D + + GR+ G IS
Sbjct: 207 LGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 265
Query: 261 YNLSQPEGVHNL------MNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVE 314
Y P G+ + ++ K ++GF + Y +Y + +L G +V
Sbjct: 266 YQ--TPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323
Query: 315 DVAD--------GLENAPAALVGLFSGRNVGKQLV 341
D+ D GLE+ A+ ++ G+N GK +V
Sbjct: 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 358
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 133/298 (44%), Gaps = 38/298 (12%)
Query: 44 NAILVKNLYLSCDP---YMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGD 100
+ +L+K +P Y+R+ ++++ P +TPGS + G V + V FKKGD
Sbjct: 58 HQVLIKVHACGVNPVETYIRSG-TYSRKP-LLPYTPGSDVAG--VIEAVGDNASAFKKGD 113
Query: 101 LVWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGI-LGMPGMTAWAGFYEICAPK 155
V+ ++ G+ EY+L + ++ L + G +G+P TA+ K
Sbjct: 114 RVFTSSTISGGYAEYALAAD----HTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVK 169
Query: 156 KGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVEL-LKNKFGFDDAFNYKEEND 214
GE + V ASG VG Q A+ G ++G+AG+ E ++ L+N G + FN++E N
Sbjct: 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHEVFNHREVNY 227
Query: 215 LDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMN 274
+D K +GIDI E + L L + GR+ G + N +
Sbjct: 228 IDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI-------NPRD 280
Query: 275 VVYKRIRMEGFVVF----DYFPQYSRFLDAVL------PYIREGKVVYVEDVADGLEN 322
+ K + G +F + F QY+ L A + P I G +E VA+ EN
Sbjct: 281 TMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVI--GSQYPLEKVAEAHEN 336
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 46 ILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLV--W 103
+L+KN Y + Y+ + P + G G VAK G F+ GD V
Sbjct: 38 LLIKNKYTGVN-YIESYFRKGIYPCEKPYVLGREASGTVVAK--GKGVTNFEVGDQVAYI 94
Query: 104 GTTGWEEYSLIKNPQGLFKIHH--TDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIY 161
+ + +YS I + + K+ +D L Y L + +TA + E KKG+Y+
Sbjct: 95 SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTALSFTNEAYHVKKGDYVL 153
Query: 162 VSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKR 221
+ AA+G VG ++ Q K+ G + + A + EK+++ K ++G + N +E+ L LK
Sbjct: 154 LFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKEDILRQVLKF 212
Query: 222 CFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNL--MNVVYKR 279
+G+D F+ VG + L ++ G + G S L P + L N+ R
Sbjct: 213 TNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNAS--GLIPPFSITRLSPKNITLVR 270
Query: 280 IRMEGFV 286
++ G++
Sbjct: 271 PQLYGYI 277
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
LIK P+ L D+ + G++ + GMTA ++ K G+Y+ + AA+G +G +
Sbjct: 109 LIKVPKDL------DLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHI 161
Query: 173 VGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 232
+ +A+ +G V+G+ + EK E + K G NY ++ + + +G+D+ ++
Sbjct: 162 MVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYD 220
Query: 233 HVGGKMLDAVLLNMRLHGRIAACGMIS 259
+G L L +R G AA G S
Sbjct: 221 SIGKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 20/201 (9%)
Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAV 169
E +L P+ L +PL++ +TAW + + G+ + V AA V
Sbjct: 129 EANLAPKPKNLSFEEAAAIPLTF---------LTAWQMVVDKLGVRPGDDVLVMAAGSGV 179
Query: 170 GQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDI 229
Q AKL G V+ +AGS +K+ K G D+ NY + + +G D
Sbjct: 180 SVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHPDWPKEVRRLTGGKGADK 238
Query: 230 YFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVFD 289
+H G + V+ GRIA G S Y EG +V Y+++ + G
Sbjct: 239 VVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILG----S 289
Query: 290 YFPQYSRFLDAVLPYIREGKV 310
SR +L ++ EGK+
Sbjct: 290 TMASKSRLFP-ILRFVEEGKL 309
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 113/291 (38%), Gaps = 46/291 (15%)
Query: 59 MRARMSFNQDPDFS----SFTP---GSPIEGF---GVAKVVDSGHPEFKKGDLVWGTT-- 106
+RA PD + S+ P SPI G G V G + GD V G
Sbjct: 60 VRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLANG 119
Query: 107 -GWEEYSLIKN------PQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEY 159
+ EY L+ P+G + +P +++T WA ++ +GE
Sbjct: 120 GAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWANLFQXAGLTEGES 170
Query: 160 IYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAAL 219
+ + + +G Q A+ G V +AGS K E + + G NY+ E D A +
Sbjct: 171 VLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVI 228
Query: 220 KRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKR 279
K +G+DI + +G + + ++ G ++ +I+ + E V NL + KR
Sbjct: 229 KAETGQGVDIILDXIGAAYFERNIASLAKDGCLS---IIAFLGGAVAEKV-NLSPIXVKR 284
Query: 280 IRMEGFVVFDYFPQYSR-----FLDAVLPYIREGKVVYV-------EDVAD 318
+ + G + R L V P + G V V EDVAD
Sbjct: 285 LTVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVAD 335
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
L+ P+GL +P ++ +TA+ + + + G+Y+ + A VG
Sbjct: 128 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 178
Query: 173 VGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 232
Q ++ G + +AGS++K+++ K G FNYK+E+ +A LK G+++ +
Sbjct: 179 AIQLTRMAGAIPLVTAGSQKKLQM-AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILD 237
Query: 233 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 266
+GG + + + L GR G++ +++ P
Sbjct: 238 CIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 271
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQL 172
L+ P+GL +P ++ +TA+ + + + G+Y+ + A VG
Sbjct: 112 LMPIPEGLTLTQAAAIPEAW---------LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTA 162
Query: 173 VGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFE 232
Q ++ G + +AGS++K+++ K G FNYK+E+ +A LK G+++ +
Sbjct: 163 AIQLTRMAGAIPLVTAGSQKKLQM-AEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILD 221
Query: 233 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP 266
+GG + + + L GR G++ +++ P
Sbjct: 222 CIGGSYWEKNVNCLALDGRWVLYGLMGGGDINGP 255
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 105/271 (38%), Gaps = 35/271 (12%)
Query: 40 EEGSNAILVKNLYLSCDPYMRARMSFNQDPDFS-SFTPGSPIEGFGVAKVVDSGHPEFKK 98
E G + I+V+ L +S + + + D + F P S + GV + V F+
Sbjct: 50 EAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPAS--DXSGVVEAVGKSVTRFRP 107
Query: 99 GDLVWGT--TGW-------------------------EEYSLIKNPQGLFKIHHTDVPLS 131
GD V T GW EY ++ P+G F + +
Sbjct: 108 GDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVL--PEGWFVAAPKSLDAA 165
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
+ L G+TAW E + G+ + V +G V Q AK G V+ ++ SR
Sbjct: 166 EAS-TLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSR 223
Query: 192 EKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGR 251
EK++ G D N EE+ ++ G D E GG L L + GR
Sbjct: 224 EKLDR-AFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGR 282
Query: 252 IAACGMISQYNLSQPEGVHNLMNVVYKRIRM 282
I+ G++ + +S P G L + V + I +
Sbjct: 283 ISVIGVLEGFEVSGPVGPLLLKSPVVQGISV 313
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 12/199 (6%)
Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEEND 214
+ GE + + + SG VGQ A GC V + GS EK L+ +F D + D
Sbjct: 1666 QPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRD 1725
Query: 215 L---DAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHN 271
L+ +G+D+ + + L A + + HGR G +++LS +
Sbjct: 1726 TSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIG---KFDLSNNHALG- 1781
Query: 272 LMNVVYKRIRMEGFVVFDYFPQ----YSRFLDAVLPYIREGKVVYVEDVADGLENAPAAL 327
M V K + G ++ F + + + + I+EG V ++ AA
Sbjct: 1782 -MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAF 1840
Query: 328 VGLFSGRNVGKQLVVVSRE 346
+ G+++GK ++ V E
Sbjct: 1841 RYMAQGKHIGKVVIQVREE 1859
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 138 GMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELL 197
G+ +TAW E+ GE + + +A+G VG AK++G + +AGS K E+L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 198 KNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKML 239
++ G + + + + D L+ G+D+ + G+ +
Sbjct: 80 -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 113 LIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-CAPKKGEYIYVSAASGAVGQ 171
L+ PQGL D + G G M + P+ GE I V+ ASG VG
Sbjct: 130 LVAMPQGL------DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGE-IVVTGASGGVGS 182
Query: 172 LVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 231
+G VV +G E LK+ G E + K+ + ID
Sbjct: 183 TAVALLHKLGYQVVAVSGRESTHEYLKS-LGASRVLPRDEFAESRPLEKQVWAGAIDT-- 239
Query: 232 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEG 284
VG K+L VL M G +AACG+ + L +M + + +R++G
Sbjct: 240 --VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPT-----TVMPFILRNVRLQG 285
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 16/231 (6%)
Query: 42 GSNAILVKNLYLS---CDPYMRARMSFNQDPDFSSFTP-GSPIEGFGVAKVVDSGHPEFK 97
G A++V+N + D Y R+ + + F P G EG GV + V FK
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYRSGLYP------APFLPSGLGAEGAGVVEAVGDEVTRFK 80
Query: 98 KGDLV-WGTTGWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKK 156
GD V +GT YS + + D L + G+T + K
Sbjct: 81 VGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKP 140
Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLD 216
GE I AA+G VG L Q+AK +G ++G+ S EK K G + +Y E+
Sbjct: 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHEDVAK 199
Query: 217 AALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIA----ACGMISQYNL 263
L+ + + ++ VG L ++ G + A G +S NL
Sbjct: 200 RVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNL 250
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 15/200 (7%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC--YVVGSAGSREKVELLKN 199
+TA+ ++ + GE + V +A+G VG Q A+ +G Y S + VEL +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSRE 390
Query: 200 KFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMIS 259
++ E+ L A R G+D+ + G+ DA L + GR G
Sbjct: 391 HLASSRTCDF-EQQFLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELG--- 442
Query: 260 QYNLSQPEGVHNLMNVVYKRIRMEGFVVFDYFPQYSRFLDAVLPYIREGKVVYVEDV-AD 318
+ ++ P V + + + + F + PQ + L + EG+V+ V A
Sbjct: 443 KTDVRDPVEVAD----AHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAW 498
Query: 319 GLENAPAALVGLFSGRNVGK 338
+ AP AL L R+VGK
Sbjct: 499 DVRQAPEALRHLSQARHVGK 518
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 33/186 (17%)
Query: 102 VWGTT----GWEEYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAP--- 154
+WG G E +L+K+ Q + K H LS+ PG+ + ++ +
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPKPDH----LSWEEA--AAPGLVNSTAYRQLVSRNGA 224
Query: 155 --KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFN---- 208
K+G+ + + ASG +G QFA G + S +K E+ + G + +
Sbjct: 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAE 283
Query: 209 ----YKEENDLDAALKRCFP---------EGIDIYFEHVGGKMLDAVLLNMRLHGRIAAC 255
+K+EN D + F E IDI FEH G + A + R G I C
Sbjct: 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTC 343
Query: 256 GMISQY 261
S Y
Sbjct: 344 ASTSGY 349
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 89/223 (39%), Gaps = 37/223 (16%)
Query: 69 PDFSSFTPGSPIEGFGVAKVVDS--GHPE--FKKGDLVWGTT----GWEEYSLIKNPQGL 120
P +++ PG + ++ ++S GH + +WG G E +L+K Q +
Sbjct: 152 PGVNAWQPGDEVVAHCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQLM 211
Query: 121 FKIHHTDVPLSYYTGILGMPGMTAWAGFYEI-----CAPKKGEYIYVSAASGAVGQLVGQ 175
K H L++ PG+ + ++ A K+G+ + + ASG +G Q
Sbjct: 212 PKPKH----LTWEEA--AAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQ 265
Query: 176 FAKLMGCYVVGSAGSREKVELLKNKFGFDDAFN--------YKEENDLDAALKRCF---- 223
FA G + S +K E+ ++ G + + +K+E+ D + F
Sbjct: 266 FALAGGANPICVVSSPQKAEICRS-MGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRI 324
Query: 224 -----PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQY 261
E IDI FEH G + A + R G I C S Y
Sbjct: 325 RELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTCASTSGY 367
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 17/224 (7%)
Query: 73 SFTPGSPIEGFGVAKVVDSGHPEFKKGD-LVWGTTGWEEYSLIKNPQGLFKIHHTDVP-- 129
S G E G+ V SG K GD +V+ + YS + N + +P
Sbjct: 56 SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHN---IIADKAAILPAA 112
Query: 130 LSYYTGILG-MPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA 188
+S+ + G+T + + K E AA+G VG + Q+AK +G ++G+
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 172
Query: 189 GSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRL 248
G+ +K + K G NY+EE+ ++ + + + + ++ VG + L ++
Sbjct: 173 GTAQKAQSAL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQR 231
Query: 249 HGRIA----ACGMISQYNLSQPEGVHNLMNVVY-KRIRMEGFVV 287
G + + G ++ NL G+ N +Y R ++G++
Sbjct: 232 RGLMVSFGNSSGAVTGVNL----GILNQKGSLYVTRPSLQGYIT 271
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 84 GVAKVVDSGH--PEFKKGDLV---------WGTTG-WEEYSLIKNPQGLFKIHHTDVPLS 131
GVA+VV G K GD V W T + E +LI+ P +D+PL
Sbjct: 92 GVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP--------SDIPLQ 143
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
LG+ TA+ + + G+ + +A++ VGQ V Q A +G + R
Sbjct: 144 S-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202
Query: 192 EKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID---IYFEHVGGKMLDAVLLNMRL 248
++ L ++ A + E +L + F + + + VGGK +L +
Sbjct: 203 PDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLAR 262
Query: 249 HGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF----DYFP-QYSRFLDAVLP 303
G + G +++ QP V ++ +++K +++ GF + D+ P Q+ + +
Sbjct: 263 GGTMVTYGGMAK----QPV-VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 317
Query: 304 YIREGKVV 311
IR G++
Sbjct: 318 LIRRGQLT 325
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 84 GVAKVVDSGH--PEFKKGDLV---------WGTTG-WEEYSLIKNPQGLFKIHHTDVPLS 131
GVA+VV G K GD V W T + E +LI+ P +D+PL
Sbjct: 79 GVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQVP--------SDIPLQ 130
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
LG+ TA+ + + G+ + +A++ VGQ V Q A +G + R
Sbjct: 131 S-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 189
Query: 192 EKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID---IYFEHVGGKMLDAVLLNMRL 248
++ L ++ A + E +L + F + + + VGGK +L +
Sbjct: 190 PDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLAR 249
Query: 249 HGRIAACGMISQYNLSQPEGVHNLMNVVYKRIRMEGFVVF----DYFP-QYSRFLDAVLP 303
G + G +++ QP V ++ +++K +++ GF + D+ P Q+ + +
Sbjct: 250 GGTMVTYGGMAK----QPV-VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCD 304
Query: 304 YIREGKVV 311
IR G++
Sbjct: 305 LIRRGQLT 312
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKF 201
+TA+ +E+ ++G + V +A G VGQ V Q + V S K E +K+
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 202 G--FDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 236
FD +Y +E +KR EG+DI + + G
Sbjct: 188 THLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 83/222 (37%), Gaps = 44/222 (19%)
Query: 74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGT---------TGWEEYS------LIKNPQ 118
F PG + G VV S HP F++GD V T G+ EY+ L+ P+
Sbjct: 62 FVPGIDLAGV----VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPK 117
Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVG 174
GL + G G TA + + P++G + V+ A+G VG L
Sbjct: 118 GLTLKEAXAI---------GTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAV 167
Query: 175 QFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFP---EGIDIYF 231
G V S G + + L+ G + + D +R P +
Sbjct: 168 SXLAKRGYTVEASTGKAAEHDYLRV-LGAKEVLARE-----DVXAERIRPLDKQRWAAAV 221
Query: 232 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM 273
+ VGG+ L VL R G +A G+ + P VH +
Sbjct: 222 DPVGGRTLATVLSRXRYGGAVAVSGLTGGAEV--PTTVHPFI 261
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 32/189 (16%)
Query: 88 VVDSGHPEFKKGDLVWGTT---------GWEEYS------LIKNPQGLFKIHHTDVPLSY 132
VV S P F +GD V T+ G EY+ L+ PQ L
Sbjct: 73 VVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAX------ 126
Query: 133 YTGILGMPGMTAWAGFYEI----CAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSA 188
+ G G TA + + +P+KG + A G G V K G VV S
Sbjct: 127 ---VYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSXLNK-RGYDVVAST 182
Query: 189 GSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRL 248
G+RE + LK + G + + E+ D LK + + VGGK L ++L ++
Sbjct: 183 GNREAADYLK-QLGASEVIS--REDVYDGTLKALSKQQWQGAVDPVGGKQLASLLSKIQY 239
Query: 249 HGRIAACGM 257
G +A G+
Sbjct: 240 GGSVAVSGL 248
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 157 GEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLD 216
G ++ +S A+G +G L Q+AK MG V+G G K EL ++ G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIV 228
Query: 217 AALKR 221
A+ +
Sbjct: 229 GAVLK 233
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 76 PGSPIEGFGVAKVVDSGHPE---FKKGDLVWGTTGW--------------EEYSLIKNPQ 118
P I G +A V + PE F+ GD V+G TG + L P
Sbjct: 62 PLPAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPA 121
Query: 119 GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAK 178
L + +PL + +TAW G + + G+ + + G VG + Q A
Sbjct: 122 ALTXRQASVLPLVF---------ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIAL 172
Query: 179 LMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKM 238
G V +A + +E +++ G +E D A + +G D+ ++ +GG +
Sbjct: 173 ARGARVFATARGSD-LEYVRD-LGATPIDASREPEDY--AAEHTAGQGFDLVYDTLGGPV 228
Query: 239 LDAVLLNMRLHGRIAAC 255
LDA ++ G + +C
Sbjct: 229 LDASFSAVKRFGHVVSC 245
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Query: 154 PKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEEN 213
P+ GE + V+ ASG VG +G Y V + RE G + + E
Sbjct: 145 PQDGEVV-VTGASGGVGSTAVALLHKLG-YQVAAVSGRESTHGYLKSLGANRILSRDEFA 202
Query: 214 DLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLM 273
+ K+ + ID VG K+L VL G +AACG+ + L +
Sbjct: 203 ESRPLEKQLWAGAIDT----VGDKVLAKVLAQXNYGGCVAACGLAGGFALPT-----TVX 253
Query: 274 NVVYKRIRMEG 284
+ + +R++G
Sbjct: 254 PFILRNVRLQG 264
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 108/281 (38%), Gaps = 53/281 (18%)
Query: 74 FTPGSPIEGFGVAKVVDSGHPEFKKGDLV---W----------GTTGWEE---------Y 111
F PG EG G V SG K+GD V W TGWE Y
Sbjct: 63 FIPGH--EGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY 120
Query: 112 SL--------IKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVS 163
S+ + +P I +V + IL G+T + G + A + G+++ +S
Sbjct: 121 SVNGGYAEYVLADPN-YVGILPKNVEFAEIAPIL-CAGVTVYKGLKQTNA-RPGQWVAIS 177
Query: 164 AASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCF 223
G +G + Q+A+ MG +V K+EL + K G N ++E+ ++ A++R
Sbjct: 178 GIGG-LGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQEDPVE-AIQRDI 234
Query: 224 PEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQP------EGVHNLMNVVY 277
+ V + R G IA G+ + P +G+H ++V
Sbjct: 235 GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGL-PPGDFPTPIFDVVLKGLHIAGSIVG 293
Query: 278 KRIRM--------EGFVVFDYFPQYSRFLDAVLPYIREGKV 310
R + EG V P ++ +L +R G++
Sbjct: 294 TRADLQEALDFAGEGLVKATIHPGKLDDINQILDQMRAGQI 334
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/128 (17%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 142 MTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKF 201
+TAW E ++ + + V+A A+G L Q ++++ ++ + + E L +
Sbjct: 130 LTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RL 188
Query: 202 GFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQY 261
G + + ++ G D + +GG + + ++R +G G++S
Sbjct: 189 GAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGI 248
Query: 262 NLSQPEGV 269
++ E V
Sbjct: 249 QVNWAEIV 256
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 18/124 (14%)
Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKE--- 211
K+G+ + + ASG +G QF K G V S +K E G D N E
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQK-EAAVRALGCDLVINRAELGI 277
Query: 212 ENDLDAALKRCFPEGI--------------DIYFEHVGGKMLDAVLLNMRLHGRIAACGM 257
+D+ +R G DI FEH G ++ R G + CG
Sbjct: 278 TDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGS 337
Query: 258 ISQY 261
S Y
Sbjct: 338 SSGY 341
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
+L+ P+GL P+S+ T L + A + GE + V AA+GA+G
Sbjct: 91 ALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA----------RPGEKVLVQAAAGALGT 140
Query: 172 LVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 231
Q A+ MG V+ +A EK+ L G ++A Y E + A G+D+
Sbjct: 141 AAVQVARAMGLRVLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWG-----GLDLVL 194
Query: 232 EHVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQ 265
E V GK ++ L + GR+ I L +
Sbjct: 195 E-VRGKEVEESLGLLAHGGRLVYIAPIPPLRLMR 227
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 62/160 (38%), Gaps = 21/160 (13%)
Query: 89 VDSGHPEFKKGDLVWGTTGWE----------EYSLIKNPQGLFKIHHTDVPLSYYTGILG 138
V +G P+ G L GW+ EY + + I D+PL I
Sbjct: 95 VQAGFPQHSNGML----AGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITD 150
Query: 139 MPGMTAWAGFY--EICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVEL 196
M MT GF+ E+ + G + V GAVG + AKL G + GSR
Sbjct: 151 M--MTT--GFHGAELADIQMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVE 205
Query: 197 LKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYFEHVGG 236
+G D NYK + +D +K +G+D GG
Sbjct: 206 AAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGG 245
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
+L+ P+GL P+S+ T L + A + GE + V AA+GA+G
Sbjct: 91 ALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA----------RPGEKVLVQAAAGALGT 140
Query: 172 LVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 231
Q A+ MG V+ +A EK+ L G ++A Y E + A G+D+
Sbjct: 141 AAVQVARAMGLRVLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWG-----GLDLVL 194
Query: 232 EHVGGKMLDAVLLNMRLHGRIAACG 256
E V GK ++ L + GR+ G
Sbjct: 195 E-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|3NGY|A Chain A, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|B Chain B, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|C Chain C, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGY|D Chain D, Crystal Structure Of Rnase T (E92g Mutant)
pdb|3NGZ|A Chain A, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Gc) With One Mg In The Active Site
pdb|3NGZ|B Chain B, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Gc) With One Mg In The Active Site
pdb|3V9U|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9U|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aat) With Two Mg In The Active Site
pdb|3V9W|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3V9W|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tta) With Two Mg In The Active Site
pdb|3VA3|A Chain A, Crystal Structure Of Rnase T In Complex With A Duplex Dna
Product (Stem Loop Dna With 2 Nucleotide 3' Overhang)
pdb|3VA3|B Chain B, Crystal Structure Of Rnase T In Complex With A Duplex Dna
Product (Stem Loop Dna With 2 Nucleotide 3' Overhang)
Length = 235
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-- 70
V++ GF +TD L++ ++I+LK++E + L+ +P++ A N P+
Sbjct: 40 VVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGA----NLQPEAL 95
Query: 71 -FSSFTPGSPIEG 82
F+ P P G
Sbjct: 96 AFNGIDPNDPDRG 108
>pdb|3NH0|A Chain A, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Aac)
pdb|3NH0|B Chain B, Crystal Structure Of Rnase T In Complex With A
Non-Preferred Ssdna (Aac)
pdb|3NH1|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH1|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Tagg) With Two Mg In The Active Site
pdb|3NH2|A Chain A, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|B Chain B, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|E Chain E, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3NH2|F Chain F, Crystal Structure Of Rnase T In Complex With A Stem Dna
With A 3' Overhang
pdb|3V9S|A Chain A, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Aac) With One Mg In The Active Site
pdb|3V9S|B Chain B, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Aac) With One Mg In The Active Site
pdb|3V9X|A Chain A, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|B Chain B, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|C Chain C, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9X|D Chain D, Crystal Structure Of Rnase T In Complex With A Preferred
Ssdna (Aaa) With Two Mg In The Active Site
pdb|3V9Z|A Chain A, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Acc) With One Mg In The Active Site
pdb|3V9Z|B Chain B, Crystal Structure Of Rnase T In Complex With A Product
Ssdna (Acc) With One Mg In The Active Site
pdb|3VA0|A Chain A, Crystal Structure Of Rnase T In Complex With A
Di-Nucleotide Product (Gg) With One Mg In The Active
Site
pdb|3VA0|B Chain B, Crystal Structure Of Rnase T In Complex With A
Di-Nucleotide Product (Gg) With One Mg In The Active
Site
Length = 235
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-- 70
V++ GF +TD L++ ++I+LK++E + L+ +P++ A N P+
Sbjct: 40 VVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGA----NLQPEAL 95
Query: 71 -FSSFTPGSPIEG 82
F+ P P G
Sbjct: 96 AFNGIDPNDPDRG 108
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 7/121 (5%)
Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFY--EICAPKKGEYIYVSAASG 167
EY + + I D+PL I M MT GF+ E+ + G + V G
Sbjct: 122 EYFHVNDADMNLAILPKDMPLENAVMITDM--MTT--GFHGAELADIQMGSSVVVIGI-G 176
Query: 168 AVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI 227
AVG + AKL G + GSR +G D NYK + +D +K +G+
Sbjct: 177 AVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGV 236
Query: 228 D 228
D
Sbjct: 237 D 237
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii
Length = 488
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 182 CYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGID--------IYFEH 233
Y+VG + K+GFD FN+K + A K FP G + +Y
Sbjct: 228 VYLVGEVWDISETVAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDRE 287
Query: 234 VG-GKMLDAVLLNMRLHGRI 252
VG G +DA L RI
Sbjct: 288 VGFGNYIDAPFLTNHDQNRI 307
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 112 SLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQ 171
+L+ P+GL P+S+ T L + A + GE + V AA+GA+G
Sbjct: 91 ALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQA----------RPGEKVLVQAAAGALGT 140
Query: 172 LVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGIDIYF 231
Q A+ G V+ +A EK+ L G ++A Y E + A G+D+
Sbjct: 141 AAVQVARAXGLRVLAAASRPEKLA-LPLALGAEEAATYAEVPERAKAWG-----GLDLVL 194
Query: 232 EHVGGKMLDAVLLNMRLHGRIAACG 256
E V GK ++ L + GR+ G
Sbjct: 195 E-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNK 200
G+T + ++ K GE++ + G +G + Q+AK MG VV EK+EL K +
Sbjct: 150 GVTTYKAL-KVTGAKPGEWVAIYGIGG-LGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E 206
Query: 201 FGFDDAFNYKEEN 213
G D N +E+
Sbjct: 207 LGADLVVNPLKED 219
>pdb|2IBP|A Chain A, Crystal Structure Of Citrate Synthase From Pyrobaculum
Aerophilum
pdb|2IBP|B Chain B, Crystal Structure Of Citrate Synthase From Pyrobaculum
Aerophilum
Length = 409
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 12 QVILKNYVE-GFPKETDMLVKASSISLKVEEGSNAILV--KNLYLSCDPYMRARMSFNQD 68
++ ++NY+E G P + +V+A++ + G ++ +Y + DP + F++D
Sbjct: 254 EMAVRNYLEIGTPAKAKEIVEAAT-----KPGGPKLMGVGHRVYKAYDPRAKIFKEFSRD 308
Query: 69 PDFSSFTPGSPIEGFGVAKVVDS---GHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKIHH 125
+ F G P F +A ++ HP F++ L W + ++
Sbjct: 309 -YVAKF--GDPQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAF----------YY 355
Query: 126 TDVPLSYYTGILGMPGMTAWAG 147
+P Y+T I M + W
Sbjct: 356 MGIPYEYFTPIFAMSRVVGWVA 377
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 5/96 (5%)
Query: 167 GAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG 226
GAVG + AKL G + GSR +G D NYK + +D +K +G
Sbjct: 176 GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKG 235
Query: 227 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN 262
+D GG + ++M + G+IS N
Sbjct: 236 VDRVIMAGGGSETLSQAVSM-----VKPGGIISNIN 266
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 10/66 (15%)
Query: 132 YYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSR 191
Y+ G + PGM W + V+ ASG +G V + G VVG A +
Sbjct: 17 YFQGHMARPGMERW----------RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV 66
Query: 192 EKVELL 197
+E L
Sbjct: 67 GNIEEL 72
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Query: 167 GAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEG 226
GAVG + AKL G + GSR +G D NYK + +D +K +G
Sbjct: 176 GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKG 235
Query: 227 IDIYFEHVGGKMLDAVLLNMRLHGRIAACGMISQYN 262
+D GG + + M + G+IS N
Sbjct: 236 VDRVIMAGGGSETLSQAVKM-----VKPGGIISNIN 266
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 151 ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYK 210
+ P G ++ A G +G L AK G Y V + E L K G D N
Sbjct: 162 LAGPIAGRSTLITGA-GPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPF 220
Query: 211 EENDLDAALKRCFPEGIDIYFEHVGG-KMLDAVLLNMRLHGRIAACGMISQ 260
EE+ + + G++++ E G K L+ L + GR++ G+ +
Sbjct: 221 EEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPR 271
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 155 KKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEEND 214
+ GE + V A+G +G Q AK MG V+ E +K+ G D EE
Sbjct: 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGADIVLPL-EEGW 215
Query: 215 LDAALKRCFPEGIDIYFEHVGGKMLDAVLLNMRLHGRIAACG 256
A + G+D+ + +GG D + + GR+ G
Sbjct: 216 AKAVREATGGAGVDMVVDPIGGPAFDDAVRTLASEGRLLVVG 257
>pdb|2F03|A Chain A, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii In Complex With Cognate Dna (Partial Bound Form)
pdb|2F03|C Chain C, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii In Complex With Cognate Dna (Partial Bound Form)
Length = 269
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 VKNLYLSCDPYMRARMSFNQDPDFSSFTPG--SPIEGFGVAKV 88
+K++Y+ P+ R + +N DPD S F G SP G VA++
Sbjct: 178 LKSIYVLSLPHARLKQRYNPDPDTSFFGAGKHSPARG-EVARI 219
>pdb|2EZV|A Chain A, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii Bound To Cognate Dna.
pdb|2EZV|B Chain B, Crystal Structure Of Tetrameric Restriction Endonuclease
Sfii Bound To Cognate Dna
Length = 269
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 48 VKNLYLSCDPYMRARMSFNQDPDFSSFTPG--SPIEGFGVAKV 88
+K++Y+ P+ R + +N DPD S F G SP G VA++
Sbjct: 178 LKSIYVLSLPHARLKQRYNPDPDTSFFGAGKHSPARG-EVARI 219
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 141 GMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKVELLKNK 200
G+T + ++ K GE++ + G G + Q+AK MG VV EK+EL K +
Sbjct: 150 GVTTYKAL-KVTGAKPGEWVAIYGIGG-FGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E 206
Query: 201 FGFDDAFNYKEEN 213
G D N +E+
Sbjct: 207 LGADLVVNPLKED 219
>pdb|2IS3|A Chain A, Crystal Structure Of Escherichia Coli Rnase T
pdb|2IS3|B Chain B, Crystal Structure Of Escherichia Coli Rnase T
pdb|2IS3|C Chain C, Crystal Structure Of Escherichia Coli Rnase T
pdb|2IS3|D Chain D, Crystal Structure Of Escherichia Coli Rnase T
Length = 215
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 13 VILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPD-- 70
V++ GF +TD L++ ++I+LK +E L+ +P++ A N P+
Sbjct: 20 VVIDVETAGFNAKTDALLEIAAITLKXDEQGWLXPDTTLHFHVEPFVGA----NLQPEAL 75
Query: 71 -FSSFTPGSPIEG 82
F+ P P G
Sbjct: 76 AFNGIDPNDPDRG 88
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 110 EYSLIKNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFY--EICAPKKGEYIYVSAASG 167
EY + + I D+PL I M MT GF+ E+ + G + V G
Sbjct: 122 EYFHVNDADMNLAILPKDMPLENAVMITDM--MTT--GFHGAELADIEMGSSVVVIGI-G 176
Query: 168 AVGQLVGQFAKLMGCYVVGSAGSREKVELLKNKFGFDDAFNYKEENDLDAALKRCFPEGI 227
AVG + AKL G + GSR +G D NYK + D +K +G+
Sbjct: 177 AVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGV 236
Query: 228 D 228
D
Sbjct: 237 D 237
>pdb|1DQS|A Chain A, Crystal Structure Of Dehydroquinate Synthase (Dhqs)
Complexed With Carbaphosphonate, Nad+ And Zn2+
pdb|1DQS|B Chain B, Crystal Structure Of Dehydroquinate Synthase (Dhqs)
Complexed With Carbaphosphonate, Nad+ And Zn2+
pdb|1NR5|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+, Nad And Carbaphosphonate
pdb|1NR5|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+, Nad And Carbaphosphonate
pdb|1NRX|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NRX|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NUA|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+
pdb|1NUA|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+
pdb|1NVA|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Adp
pdb|1NVA|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Adp
pdb|1NVB|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVB|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVD|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVD|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Carbaphosphonate
pdb|1NVE|A Chain A, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|B Chain B, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|C Chain C, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVE|D Chain D, Crystal Structure Of 3-Dehydroquinate Synthase (Dhqs) In
Complex With Zn2+ And Nad
pdb|1NVF|A Chain A, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1NVF|B Chain B, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1NVF|C Chain C, Crystal Structure Of 3-dehydroquinate Synthase (dhqs) In
Complex With Zn2+, Adp And Carbaphosphonate
pdb|1SG6|A Chain A, Crystal Structure Of Aspergillus Nidulans 3-Dehydroquinate
Synthase (Andhqs) In Complex With Zn2+ And Nad+, At 1.7d
pdb|1SG6|B Chain B, Crystal Structure Of Aspergillus Nidulans 3-Dehydroquinate
Synthase (Andhqs) In Complex With Zn2+ And Nad+, At 1.7d
Length = 393
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 233 HVGGKMLDAVLLNMRLHGRIAACGMISQYNLSQPEGVHNLMNVVYKRI 280
H G ++A+L LHG A GM+ + L++ G+ L V RI
Sbjct: 271 HSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGI--LKGVAVSRI 316
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,001,060
Number of Sequences: 62578
Number of extensions: 497867
Number of successful extensions: 1317
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1218
Number of HSP's gapped (non-prelim): 66
length of query: 346
length of database: 14,973,337
effective HSP length: 100
effective length of query: 246
effective length of database: 8,715,537
effective search space: 2144022102
effective search space used: 2144022102
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)