BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019079
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP + L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 334 DDFRLRLAVPRKN 346
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP + L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 334 DDFRLRLAVPRKN 346
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP + L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 334 DDFRLRLAVPRKN 346
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GEPLTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328
Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
T+LE A+ +K L+ EI + DDP++RKPDI KA +LGWEP + L +GL
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388
Query: 334 DDFRLRLAVPRKN 346
FR L N
Sbjct: 389 HYFRKELEYQANN 401
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/342 (59%), Positives = 250/342 (73%), Gaps = 10/342 (2%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKN 58
+ ++I N + K PP KF + RIL+TGGAGF+GSHL DKLM + +
Sbjct: 63 LREKIQNLERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGH 114
Query: 59 EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+
Sbjct: 115 EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI 174
Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDE
Sbjct: 175 KTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDE 234
Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
GKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GE LTV G
Sbjct: 235 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSG 294
Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
QTR+F YVSD+V+GL+ LM + P+N+GNP E ++++ A +K+L+ EI+ +
Sbjct: 295 EQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSE 354
Query: 299 TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRL 340
DDP++RKPDI KA LLGWEP + L +GL FR L
Sbjct: 355 AQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/296 (64%), Positives = 234/296 (79%), Gaps = 1/296 (0%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
RIL+TGGAGF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EP
Sbjct: 88 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146
Query: 94 LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
L IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
P VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266
Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
+DGRVVSNFI QA++GE LTV G+QTR+F YVSD+V+GL+ LM + P+N+GNP E
Sbjct: 267 NDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEE 326
Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
T+LE A+ +K L+ I + DDP++R+PDI KA LLGWEP + L +GL
Sbjct: 327 HTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGL 382
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 32/309 (10%)
Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
ILVTGGAGFIGSH+VDKL+EN +VI++DN TG+K+N+ +P+ E + D+ +
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55
Query: 95 LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 146
L E V+ + H A + NPV NV+GT+N+L + ++ + + +S
Sbjct: 56 LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115
Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
VYG+P P DE++ PI S Y K V E + Y+R +GIE I R N
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 207 YGPRMN-IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
YG R + + V+S FI + ++ + + G QTR F YV D+ + + +N
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNE-I 229
Query: 266 INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP-----DITKATELLGWE 320
+NIG E ++ EL + +K I E D PR+ + DI KA E LGW+
Sbjct: 230 VNIGTGKETSVNELFDIIKHEIGFRGEAIY-----DKPREGEVYRIYLDIKKA-ESLGWK 283
Query: 321 PKIKLRDGL 329
P+I L++G+
Sbjct: 284 PEIDLKEGI 292
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 24/313 (7%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
M+ILVTGGAGFIGSH V L+ + +V VVD + G+ NL + PRF
Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60
Query: 86 IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
+R D+ + LIE D + H A + +N++GT +L A R +
Sbjct: 61 VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
G R L ST EVYG D W +P+ S Y K ++ L YH+ HG+++
Sbjct: 121 G-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
+ R N YGPR + +++ F+ + + G + V G R + +VSD GL +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232
Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKATEL 316
G + +IG E T LEL E + E P I+ V + R+ D +K
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGE 292
Query: 317 LGWEPKIKLRDGL 329
LG+ P++ DG+
Sbjct: 293 LGYRPRVDFTDGI 305
>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=arnA PE=3 SV=1
Length = 673
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 40/353 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 432 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 490
Query: 197 EIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN GPR++ I R ++ I + G P+ + G Q R F + D
Sbjct: 491 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 550
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAENVKELIN---------PNVEITMV 296
++ L R++E N INIGNP E ++ EL E + N P V
Sbjct: 551 IEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFIDV 610
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVP 343
E++ D R P I A LL WEP +K+ + D F + VP
Sbjct: 611 ESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRTVDVP 663
>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3
SV=1
Length = 672
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 41/354 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S+ + R+L+ G GFIG+HL ++L+ +++ E+ +D S D + +++G PRF
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ R
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+
Sbjct: 431 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 489
Query: 197 EIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ R FN GPR++ I R ++ I + G P+ + G Q R F + D
Sbjct: 490 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 549
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLEL---------AENVKELINPNVEITMV 296
++ L R++E N INIGNP E ++ EL A +++ P V
Sbjct: 550 IEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIEV 609
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
E++ D R P I A LL WEP +K+ + D F LR P+
Sbjct: 610 ESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYF-LRTVDPQ 662
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 168/344 (48%), Gaps = 41/344 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ +++ ++ +D GS D + +++G+PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +D S V PI R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPF 491
Query: 205 NTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR+ N+D R+ ++ I + G P+ + G Q R F ++D ++ L R++
Sbjct: 492 NWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKRCFTDINDGIEALFRII 551
Query: 259 E---GENTGPI-NIGNP-GEFTMLELAENVKELIN---------PNVEITMVENTP---- 300
E G G I NIGNP E ++ ELAE + E N P VE++
Sbjct: 552 ENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDRFPPFAGFKDVESSSYYGK 611
Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV 342
D R P I A LL W+P I ++ + D F LR V
Sbjct: 612 GYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYF-LRTTV 654
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 164/344 (47%), Gaps = 41/344 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ ++ +D GS + ++IG+PRF I DV+
Sbjct: 317 RVLILGVNGFIGNHLTERLLKDGNYDIYGMD---IGSS-AIERFIGNPRFHFIEGDVSIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +D S V PI R Y K++ + +++ Y + G++ + R F
Sbjct: 433 SEVYGMCDDKEFDEDNSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPF 491
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F ++D ++ L R++
Sbjct: 492 NWMGPRLDNLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFRII 551
Query: 259 EGENTGP----INIGNP-GEFTMLELAENVKELIN---------PNVEITMVENTP---- 300
E + INIGNP E ++ ELAE + + P +E++
Sbjct: 552 ENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGHFPPFAGFKKIESSSYYGK 611
Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV 342
D RKP I A LL W+P I+ R + DF LR AV
Sbjct: 612 GYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETL-DFFLRGAV 654
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 38/328 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ EV +D GS + ++IGHP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLD---IGSS-AVDRFIGHPNFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPST 434
Query: 148 SEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG H DE S V PI R Y K++ + +++ Y ++ G+ + R FN
Sbjct: 435 SEVYGMCDDHSFDEDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPFN 494
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++E
Sbjct: 495 WMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRIIE 554
Query: 260 GE----NTGPINIGNP-GEFTMLELAE---------NVKELINPNVEITMVENTP----- 300
+ + INIGNP E ++ ++AE +++ P +VE+
Sbjct: 555 NKENRCDGQIINIGNPDNEASIQQMAEILLAKFEAHPLRDHFPPFAGFKLVESKSFYGDG 614
Query: 301 -DDPRQRKPDITKATELLGWEPKIKLRD 327
D R+P I A LL WEP I++ +
Sbjct: 615 YQDVSHRRPSIANARRLLDWEPTIEMEE 642
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 27/313 (8%)
Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-----FTGSKDNLRKWIGHPRFELIR 87
M+ILVTG AGFIGSHL ++L++++K+ VI +D++ F+ NL+ + RF I+
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 88 HDV----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--R 141
++ LL VD I+HLA N + I L L A R +
Sbjct: 61 ENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQT 120
Query: 142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
+ STS VYG+ + + ++P GV K E L Y + GI I I
Sbjct: 121 FVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVIL 174
Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-- 259
R F YGPR D I Q ++ +PLT+ G Q+R F Y+SD V G+ ++
Sbjct: 175 RFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKP 232
Query: 260 ---GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATEL 316
GE +NIG ++L++ ++++ + + +P DI+KA +L
Sbjct: 233 HLIGET---VNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQL 289
Query: 317 LGWEPKIKLRDGL 329
L ++P L+DGL
Sbjct: 290 LHYDPATSLKDGL 302
>sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=arnA PE=3 SV=1
Length = 661
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 163/337 (48%), Gaps = 38/337 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ E+ +D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLDCPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 148 SEVYGDPLVHPQDE-SYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE S V PI R Y K++ + +++ Y ++G++ + R FN
Sbjct: 433 SEVYGMCTDKNFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIE 552
Query: 260 ---GENTGP-INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP----- 300
G G INIGNP E ++ ELAE +++ P VE++
Sbjct: 553 NKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKG 612
Query: 301 -DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPK+++ + + D F
Sbjct: 613 YQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
>sp|B5FNT9|ARNA_SALDC Bifunctional polymyxin resistance protein ArnA OS=Salmonella dublin
(strain CT_02021853) GN=arnA PE=3 SV=1
Length = 660
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ EG+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|B4SYX1|ARNA_SALNS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
newport (strain SL254) GN=arnA PE=3 SV=1
Length = 660
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ EG+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|C0Q069|ARNA_SALPC Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi C (strain RKS4594) GN=arnA PE=3 SV=1
Length = 660
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ EG+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|A4TIM4|ARNA_YERPP Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
(strain Pestoides F) GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|Q1CIH7|ARNA_YERPN Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|A9R093|ARNA_YERPG Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Angola) GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|Q8ZDX8|ARNA_YERPE Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|Q1C742|ARNA_YERPA Bifunctional polymyxin resistance protein ArnA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|A4SQW9|ARNA_AERS4 Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
salmonicida (strain A449) GN=arnA PE=3 SV=1
Length = 663
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 160/338 (47%), Gaps = 40/338 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+++ + E+ +D S L ++I HP F + D++
Sbjct: 319 RVLILGVNGFIGNHLTERLLKDGRYEIYGLDI----SASALGRFIDHPHFHFVEGDISIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D I L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPST 434
Query: 148 SEVYG--DPLVHPQDESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG D +DES V PI R Y K++ + +++ Y ++ G+ + R F
Sbjct: 435 SEVYGMCDDHSFDEDESRL-IVGPIHKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRPF 493
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 494 NWMGPRLDSLDSARIGSSRAITQLILNLVDGTPIQLVDGGAQKRCFTDIEDGIEALFRII 553
Query: 259 EGE----NTGPINIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP---- 300
E + + INIG+P E ++L++AE ++ P VE+
Sbjct: 554 ENKGNRCDGQIINIGSPDNEASILQMAEVLLGKFEAHPLRHHFPPFAGFKRVESKSFYGD 613
Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D R+P I A LL WEP I++ + + D F
Sbjct: 614 GYQDVSHRRPSIKNARRLLDWEPTIEMEETIGKTLDFF 651
>sp|B1JJ30|ARNA_YERPY Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA
PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|Q93PD8|ARNA_YERPS Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=arnA
PE=2 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|B2K5L3|ARNA_YERPB Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=arnA
PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|A7FHH4|ARNA_YERP3 Bifunctional polymyxin resistance protein ArnA OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=arnA PE=3 SV=1
Length = 667
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 171/356 (48%), Gaps = 41/356 (11%)
Query: 26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
S + R+L+ G GFIG+HL ++L+++++ EV +D GS D + +++G+P F
Sbjct: 309 SNTLKRRTRVLILGVNGFIGNHLTERLLQDDRYEVYGLD---IGS-DAISRFLGNPAFHF 364
Query: 86 IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
+ D++ E + + D I L A+PI Y NP++ + + L ++ +
Sbjct: 365 VEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 424
Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G+
Sbjct: 425 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGVKEGL 483
Query: 197 EIRIARIFNTYGPRM-NIDDGRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
+ + R FN GPR+ N+D R+ ++ I + G P+ + G Q R F + D
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 543
Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAE---------NVKELINPNVEITMV 296
++ L R++E + INIGNP E ++ ELAE +++ P +
Sbjct: 544 IEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFENHELRDHFPPFAGFKDI 603
Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
E++ D R P I A +L W+P+I ++ + DF LR AV K
Sbjct: 604 ESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETL-DFFLRAAVIEKT 658
>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp.
(strain 638) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 40/338 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ EV +D GS D + ++IG+ RF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNFEVYGLD---IGS-DAISRFIGNSRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPST 432
Query: 148 SEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
SEVYG V +D S V PI R Y K++ + +++ Y + G+ + R F
Sbjct: 433 SEVYGMCSDKVFDEDHSNL-IVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPF 491
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
N GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++
Sbjct: 492 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDISDGIEALFRII 551
Query: 259 EGENTGP----INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP---- 300
E +N+ INIGNP E ++ ELAE ++ P VE++
Sbjct: 552 ENKNSNCDGQIINIGNPDNEASIKELAEMLLASFEKHPLRNHFPPFAGFREVESSTYYGK 611
Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L+ W P +++ + D F
Sbjct: 612 GYQDVEHRKPSIRNAHRLISWTPTVEMEKTIDETLDFF 649
>sp|Q1R9G0|ARNA_ECOUT Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain UTI89 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFF 649
>sp|A1ADA7|ARNA_ECOK1 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O1:K1 / APEC GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFF 649
>sp|B7MG22|ARNA_ECO45 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFF 649
>sp|B5RCC4|ARNA_SALG2 Bifunctional polymyxin resistance protein ArnA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3
SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILSLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|B7NNT4|ARNA_ECO7I Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFF 649
>sp|B7MXT6|ARNA_ECO81 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O81 (strain ED1a) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFMNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFF 649
>sp|B5EZH8|ARNA_SALA4 Bifunctional polymyxin resistance protein ArnA OS=Salmonella agona
(strain SL483) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|B7UFR7|ARNA_ECO27 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLIDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFF 649
>sp|B5XTK9|ARNA_KLEP3 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae (strain 342) GN=arnA PE=3 SV=1
Length = 661
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 38/337 (11%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L++++ E+ +D GS D + +++ PRF + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLQDDNYEIYGLD---IGS-DAISRFLESPRFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE V PI R Y K++ + +++ Y ++ ++ + R FN
Sbjct: 433 SEVYGMCTDKNFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F +SD ++ L R++E
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIE 552
Query: 260 ---GENTGP-INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP----- 300
G G INIGNP E ++ ELAE +++ P VE++
Sbjct: 553 NKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKG 612
Query: 301 -DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPK+++ + + D F
Sbjct: 613 YQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
>sp|B5R272|ARNA_SALEP Bifunctional polymyxin resistance protein ArnA OS=Salmonella
enteritidis PT4 (strain P125109) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|A9N5B2|ARNA_SALPB Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=arnA PE=3
SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|B4TBG6|ARNA_SALHS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
heidelberg (strain SL476) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|O52325|ARNA_SALTY Bifunctional polymyxin resistance protein ArnA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=arnA PE=2 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 46/357 (12%)
Query: 14 SKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN 73
++PP T R +R+L+ G GFIG+HL ++L+ E EV +D GS +
Sbjct: 305 NRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLNEENYEVYGMD---IGS-NA 352
Query: 74 LRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIG 127
+ +++ HPRF + D++ E + + D + L A+PI Y NP++ + +
Sbjct: 353 ISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 412
Query: 128 TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAET 185
L ++ + R++ STSEVYG DE V P+ R Y K++ +
Sbjct: 413 NLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKPRWIYSVSKQLLDR 472
Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGT 239
+++ Y + G+ + R FN GPR++ I R ++ I + G P+ + G
Sbjct: 473 VIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 532
Query: 240 QTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAENVKELIN------ 288
Q R F + D ++ L R++ +G+ INIGNP E ++ ELA + + +
Sbjct: 533 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 592
Query: 289 ---PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
P +VE+ D RKP I A LGWEP I +RD + D F
Sbjct: 593 HFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFF 649
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAE 281
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELAT 579
Query: 282 NVKELIN---------PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLR 326
+ + + P +VE+ D RKP I A L WEP I +R
Sbjct: 580 LLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMR 639
Query: 327 DGLPLMEDDF 336
D + D F
Sbjct: 640 DTVEETLDFF 649
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAE 281
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELAT 579
Query: 282 NVKELIN---------PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLR 326
+ + + P +VE+ D RKP I A L WEP I +R
Sbjct: 580 LLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMR 639
Query: 327 DGLPLMEDDF 336
D + D F
Sbjct: 640 DTVEETLDFF 649
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 46/370 (12%)
Query: 1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
+AQ + ++PP T R +R+L+ G GFIG+HL ++L++ E EV
Sbjct: 292 LAQTLGLVAGACLNRPPATSGKRR--------IRVLILGVNGFIGNHLTERLLDEENYEV 343
Query: 61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYK 114
+D GS + + +++ HPRF + D++ E + + D + L A+PI Y
Sbjct: 344 YGMD---IGS-NAISRFLLHPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT 399
Query: 115 YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG-NVNPIGV- 172
NP++ + + L ++ + R++ STSEVYG DE V P+
Sbjct: 400 RNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNKP 459
Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQA 226
R Y K++ + +++ Y + G+ + R FN GPR++ I R ++ I
Sbjct: 460 RWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNL 519
Query: 227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM--EGENTGP--INIGNP-GEFTMLELAE 281
+ G P+ + G Q R F + D ++ L R++ EG+ INIGNP E ++ ELA
Sbjct: 520 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELAT 579
Query: 282 NVKELIN---------PNVEITMVENTP------DDPRQRKPDITKATELLGWEPKIKLR 326
+ + + P +VE+ D RKP I A L WEP I +R
Sbjct: 580 LLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMR 639
Query: 327 DGLPLMEDDF 336
D + D F
Sbjct: 640 DTVEETLDFF 649
>sp|Q8FFM1|ARNA_ECOL6 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=arnA PE=3
SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFMNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFF 649
>sp|B1LLK9|ARNA_ECOSM Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=arnA PE=3 SV=1
Length = 660
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFF 649
>sp|B7LM76|ARNA_ESCF3 Bifunctional polymyxin resistance protein ArnA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 42/343 (12%)
Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
Q R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D
Sbjct: 313 QRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLTHPNFHFVEGD 368
Query: 90 VT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
++ E + + D + L A+PI Y NP++ + + L ++ + RI+
Sbjct: 369 ISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRII 428
Query: 144 LTSTSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
STSEVYG DE + V PI R Y K++ + +++ Y + G++ +
Sbjct: 429 FPSTSEVYGMCTDKFFDEDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
R FN GPR++ I R ++ I + G P+ + G Q R F + D ++ L
Sbjct: 489 RPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 548
Query: 256 RLMEGENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENT 299
R++ ENTG INIGNP E ++ EL + +++ P +VE++
Sbjct: 549 RII--ENTGNRCDGEIINIGNPDNEASIEELGKMLLASFDKHPLRQHFPPFAGFRVVESS 606
Query: 300 P------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEP I +++ + D F
Sbjct: 607 SYYGKGYQDVEHRKPSIRNARRCLDWEPTIDMQETIDETLDFF 649
>sp|A8FRR2|ARNA_SHESH Bifunctional polymyxin resistance protein ArnA OS=Shewanella
sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 163/349 (46%), Gaps = 51/349 (14%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
++L+ G GFIG+HL +L+++ K E+ +D S + + + HP F + D+T
Sbjct: 319 KVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDITIH 374
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 375 NEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPST 434
Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV------RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
SEVYG DE + + +P+ R Y K++ + +++ Y ++ ++ +
Sbjct: 435 SEVYG----MCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFTLF 490
Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
R FN GPR++ + R ++ I + G P+ + G Q R F +S+ ++ L
Sbjct: 491 RPFNWMGPRLDSLNSARVGSSRAITQLILNLVEGTPIKLIDGGEQKRCFTDISEAIEALF 550
Query: 256 RLMEGE----NTGPINIGNP-GEFTMLELAENVKELIN---------PNVEITMVENTP- 300
R++E + + INIG+P E ++ +AE + E P +VE+
Sbjct: 551 RVIENKDGLCDGQIINIGSPDNEASIKVMAETLVEKFEEHPLRDQFPPFAGYNLVESQSF 610
Query: 301 -----DDPRQRKPDITKATELLGWEPKIKLRDGLPLMED--DFRLRLAV 342
D + R+P I A +LL WEP I + + ED DF L+ AV
Sbjct: 611 YGDGYQDVQHRRPSIKNAKKLLNWEPTIMMDQTI---EDTLDFFLKTAV 656
>sp|Q3YZV1|ARNA_SHISS Bifunctional polymyxin resistance protein ArnA OS=Shigella sonnei
(strain Ss046) GN=arnA PE=3 SV=1
Length = 660
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
R+L+ G GFIG+HL ++L+ + EV +D GS D + +++ HP F + D++
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92 ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
E + + D + L A+PI Y NP++ + + L ++ + RI+ ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
SEVYG DE + V P+ R Y K++ + +++ Y + G++ + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
GPR++ I R ++ I + G P+ + G Q R F + D ++ L R++
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
EN G INIGNP E ++ EL E ++ P +VE++
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
D RKP I A L WEPKI +++ + D F
Sbjct: 611 KGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFF 649
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,909,528
Number of Sequences: 539616
Number of extensions: 6252003
Number of successful extensions: 17426
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 16348
Number of HSP's gapped (non-prelim): 700
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)