Query 019084
Match_columns 346
No_of_seqs 193 out of 1436
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 10:39:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019084.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019084hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bk8a_ g.3.7.5 (A:) Antimicro 20.5 5.1 0.00037 25.2 -1.4 10 238-247 6-15 (50)
2 d1ayja_ g.3.7.5 (A:) Antifunga 13.6 8.3 0.00061 24.4 -1.7 10 238-247 7-16 (51)
3 d1u7ga_ f.44.1.1 (A:) Ammonium 8.4 1E+02 0.0074 27.1 3.2 30 312-344 280-309 (383)
4 d2csua1 c.2.1.8 (A:1-129) Acet 7.7 72 0.0053 23.3 1.5 27 216-244 24-51 (129)
5 d1rp3b_ a.137.11.1 (B:) Anti-s 6.6 31 0.0023 23.7 -1.1 12 235-246 72-83 (87)
6 d1ecia_ a.33.1.1 (A:) Ectatomi 6.2 29 0.0021 19.6 -1.2 8 237-244 3-10 (37)
7 d2j5ya1 a.8.1.2 (A:1-53) PAB { 6.2 70 0.0051 19.8 0.6 10 236-245 32-41 (53)
8 d1gjsa_ a.8.1.2 (A:) IgG bindi 5.5 79 0.0058 20.5 0.6 10 236-245 44-53 (65)
9 g1kve.1 d.70.1.2 (A:,B:) SMK t 5.4 1.1E+02 0.0083 21.6 1.4 25 236-260 19-43 (140)
10 d2d59a1 c.2.1.8 (A:4-142) Hypo 4.8 1.3E+02 0.0093 22.2 1.4 26 216-244 35-61 (139)
No 1
>d1bk8a_ g.3.7.5 (A:) Antimicrobial protein 1 (AH-AMP1) {Horse chestnut (Aesculus hippocastanum) [TaxId: 43364]}
Probab=20.50 E-value=5.1 Score=25.21 Aligned_cols=10 Identities=50% Similarity=1.169 Sum_probs=7.9
Q ss_pred CCCcchHHHH
Q 019084 238 PKKTWEGFIG 247 (346)
Q Consensus 238 PkKTwEG~iG 247 (346)
|.|||.|+-|
T Consensus 6 ~S~TWsG~Cg 15 (50)
T d1bk8a_ 6 PSQTWSGNCG 15 (50)
T ss_dssp CCSSSCSCCC
T ss_pred CCCceeeccC
Confidence 7789988765
No 2
>d1ayja_ g.3.7.5 (A:) Antifungal protein 1 (RS-AFP1) {Radish (Raphanus sativus) [TaxId: 3726]}
Probab=13.63 E-value=8.3 Score=24.37 Aligned_cols=10 Identities=50% Similarity=1.189 Sum_probs=7.4
Q ss_pred CCCcchHHHH
Q 019084 238 PKKTWEGFIG 247 (346)
Q Consensus 238 PkKTwEG~iG 247 (346)
|.|||.|.-|
T Consensus 7 ~S~TWsG~Cg 16 (51)
T d1ayja_ 7 PSGTWSGVCG 16 (51)
T ss_dssp ECSSCCSCCS
T ss_pred cCCceeeccC
Confidence 6788888654
No 3
>d1u7ga_ f.44.1.1 (A:) Ammonium transporter AmtB {Escherichia coli [TaxId: 562]}
Probab=8.37 E-value=1e+02 Score=27.06 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHHhhcCCCCCC
Q 019084 312 WHALCLGLFASIIAPFGGFFASGFKRAFKIKVQ 344 (346)
Q Consensus 312 ~~~i~l~li~si~~~~GDL~eS~lKR~~gVKDs 344 (346)
+.++++|++.+++..++- ..+||..++-|-
T Consensus 280 ~~A~~iG~i~g~i~~~~~---~~l~~~~~iDD~ 309 (383)
T d1u7ga_ 280 GGALIIGVVAGLAGLWGV---TMLKRLLRVDDP 309 (383)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHCSCCG
T ss_pred hhHHHHHhhccHHHHHHH---HHHHhhcccccc
Confidence 677888888888887763 345666667763
No 4
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=7.70 E-value=72 Score=23.31 Aligned_cols=27 Identities=7% Similarity=0.089 Sum_probs=17.5
Q ss_pred HhhHHHHHHhhhcCCCcccccCCC-CcchH
Q 019084 216 INDIAAYIFGFFFGRTPLIKLSPK-KTWEG 244 (346)
Q Consensus 216 ~~Dt~AYf~Gr~fGk~kL~~ISPk-KTwEG 244 (346)
.+.+..|+- ..|+.++++|+|| ++++|
T Consensus 24 g~~v~~~L~--~~~~g~v~pVnP~~~~i~G 51 (129)
T d2csua1 24 GYEVFKNLK--EYKKGKVYPVNIKEEEVQG 51 (129)
T ss_dssp HHHHHHHHT--TCCSSEEEEECSSCSEETT
T ss_pred HHHHHHHHH--HcCCCcEEEeccCccccCC
Confidence 455666663 3357788899998 44444
No 5
>d1rp3b_ a.137.11.1 (B:) Anti-sigma factor FlgM {Aquifex aeolicus [TaxId: 63363]}
Probab=6.60 E-value=31 Score=23.66 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=9.8
Q ss_pred ccCCCCcchHHH
Q 019084 235 KLSPKKTWEGFI 246 (346)
Q Consensus 235 ~ISPkKTwEG~i 246 (346)
.|||+|-+||++
T Consensus 72 Ev~~~KiVeGl~ 83 (87)
T d1rp3b_ 72 EVSDEKVVKGLI 83 (87)
T ss_dssp CCCHHHHHHHHH
T ss_pred ecCHHHHHHHHH
Confidence 588888888876
No 6
>d1ecia_ a.33.1.1 (A:) Ectatomin subunit A, EA {Ant (Ectatomma tuberculatum), venom [TaxId: 39300]}
Probab=6.23 E-value=29 Score=19.59 Aligned_cols=8 Identities=63% Similarity=1.178 Sum_probs=4.5
Q ss_pred CCCCcchH
Q 019084 237 SPKKTWEG 244 (346)
Q Consensus 237 SPkKTwEG 244 (346)
=|||-||-
T Consensus 3 ipkkiwet 10 (37)
T d1ecia_ 3 IPKKIWET 10 (37)
T ss_dssp CCHHHHHH
T ss_pred ccHHHHHH
Confidence 36666663
No 7
>d2j5ya1 a.8.1.2 (A:1-53) PAB {Peptostreptococcus magnus [TaxId: 1260]}
Probab=6.16 E-value=70 Score=19.76 Aligned_cols=10 Identities=30% Similarity=0.292 Sum_probs=6.4
Q ss_pred cCCCCcchHH
Q 019084 236 LSPKKTWEGF 245 (346)
Q Consensus 236 ISPkKTwEG~ 245 (346)
|.--||+||.
T Consensus 32 InkaKTVEgV 41 (53)
T d2j5ya1 32 INKAKTVEEV 41 (53)
T ss_dssp HHHCCSHHHH
T ss_pred HHhhhhHHHH
Confidence 5556777774
No 8
>d1gjsa_ a.8.1.2 (A:) IgG binding protein G {Streptococcus sp., group G [TaxId: 1306]}
Probab=5.54 E-value=79 Score=20.45 Aligned_cols=10 Identities=40% Similarity=0.527 Sum_probs=5.8
Q ss_pred cCCCCcchHH
Q 019084 236 LSPKKTWEGF 245 (346)
Q Consensus 236 ISPkKTwEG~ 245 (346)
|.--||+||.
T Consensus 44 IN~AKTVEGV 53 (65)
T d1gjsa_ 44 INNAKTVEGV 53 (65)
T ss_dssp HHTCCSHHHH
T ss_pred HhccchHHHH
Confidence 3445777774
No 9
>g1kve.1 d.70.1.2 (A:,B:) SMK toxin {Halotolerant yeast (Pichia farinosa) [TaxId: 4920]}
Probab=5.36 E-value=1.1e+02 Score=21.60 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=20.9
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHHH
Q 019084 236 LSPKKTWEGFIGASVATITSAFVLA 260 (346)
Q Consensus 236 ISPkKTwEG~iGG~l~~~l~~~l~~ 260 (346)
-|-.-|..|..||+++++..+++..
T Consensus 19 csgaatfgglaggivgciaagilai 43 (140)
T g1kve.1 19 CSGAATFGGLAGGIVGCIAAGILAI 43 (140)
T ss_dssp CSSCCCGGGCCSHHHHHHHHHHHHH
T ss_pred CccccccccccchhHHHHHHHHHHH
Confidence 6788899999999999988776643
No 10
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=4.75 E-value=1.3e+02 Score=22.18 Aligned_cols=26 Identities=23% Similarity=0.427 Sum_probs=16.8
Q ss_pred HhhHHHHHHhhhcCCCcccccCCC-CcchH
Q 019084 216 INDIAAYIFGFFFGRTPLIKLSPK-KTWEG 244 (346)
Q Consensus 216 ~~Dt~AYf~Gr~fGk~kL~~ISPk-KTwEG 244 (346)
++.+..|+-.. | +++.+|+|| ++++|
T Consensus 35 g~~v~~~L~~~--g-~~v~pVnP~~~~i~G 61 (139)
T d2d59a1 35 ANIVMKYLLEH--G-YDVYPVNPKYEEVLG 61 (139)
T ss_dssp HHHHHHHHHHT--T-CEEEEECTTCSEETT
T ss_pred hHHHHHHHHHC--C-CEEEEECCcccccCC
Confidence 45556666543 3 378899999 55655
Done!