Query 019086
Match_columns 346
No_of_seqs 188 out of 1927
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 06:33:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019086.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019086hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0637 Predicted phosphatase/ 99.9 8.5E-27 1.9E-31 213.5 19.0 186 84-345 2-187 (221)
2 TIGR03351 PhnX-like phosphonat 99.9 1.8E-25 3.9E-30 203.2 17.6 187 84-345 1-192 (220)
3 TIGR01422 phosphonatase phosph 99.9 2.9E-25 6.4E-30 206.5 19.3 190 84-346 2-203 (253)
4 PLN02770 haloacid dehalogenase 99.9 1.3E-25 2.8E-30 208.9 16.9 192 79-345 17-209 (248)
5 PLN02779 haloacid dehalogenase 99.9 7E-25 1.5E-29 208.3 21.0 203 82-346 38-248 (286)
6 PRK13226 phosphoglycolate phos 99.9 3.1E-25 6.8E-30 203.8 17.6 186 84-346 12-197 (229)
7 PRK13288 pyrophosphatase PpaX; 99.9 4E-25 8.7E-30 200.4 17.1 184 82-346 1-184 (214)
8 TIGR01449 PGP_bact 2-phosphogl 99.9 6.6E-25 1.4E-29 198.0 17.7 186 87-345 1-186 (213)
9 PRK10826 2-deoxyglucose-6-phos 99.9 1E-24 2.2E-29 199.0 18.9 189 81-345 4-193 (222)
10 TIGR01990 bPGM beta-phosphoglu 99.9 6.7E-25 1.4E-29 193.6 16.9 184 86-344 1-185 (185)
11 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 1.3E-24 2.8E-29 191.8 17.6 185 84-343 1-185 (185)
12 PLN03243 haloacid dehalogenase 99.9 1.1E-24 2.4E-29 204.3 18.1 191 79-345 19-210 (260)
13 PRK13478 phosphonoacetaldehyde 99.9 2.8E-24 6.2E-29 201.8 19.5 192 82-346 2-205 (267)
14 PRK11587 putative phosphatase; 99.9 3E-24 6.4E-29 195.6 17.9 183 82-345 1-183 (218)
15 COG0546 Gph Predicted phosphat 99.9 3.1E-24 6.6E-29 196.3 18.1 190 82-346 2-191 (220)
16 PLN02575 haloacid dehalogenase 99.9 1.7E-24 3.7E-29 211.4 16.9 188 83-345 130-317 (381)
17 PRK10725 fructose-1-P/6-phosph 99.9 3.2E-24 7E-29 190.0 17.0 184 83-345 4-187 (188)
18 PRK10563 6-phosphogluconate ph 99.9 4.8E-24 1E-28 194.1 17.5 184 83-345 3-187 (221)
19 PLN02940 riboflavin kinase 99.9 1.2E-23 2.6E-28 207.4 19.1 186 82-345 9-195 (382)
20 PRK13222 phosphoglycolate phos 99.9 3.4E-23 7.4E-28 188.3 20.1 193 81-346 3-195 (226)
21 TIGR02252 DREG-2 REG-2-like, H 99.9 1.9E-23 4.1E-28 187.6 17.0 183 85-342 1-203 (203)
22 TIGR02253 CTE7 HAD superfamily 99.9 1.8E-23 4E-28 189.8 16.4 187 84-345 2-196 (221)
23 TIGR01454 AHBA_synth_RP 3-amin 99.9 4.5E-23 9.8E-28 185.7 16.2 176 87-346 1-177 (205)
24 PRK13225 phosphoglycolate phos 99.9 4.6E-23 1E-27 194.6 16.9 185 79-346 57-241 (273)
25 PRK13223 phosphoglycolate phos 99.9 9.4E-23 2E-27 192.4 17.9 190 84-345 13-202 (272)
26 TIGR01428 HAD_type_II 2-haloal 99.9 2.2E-23 4.8E-28 186.6 12.6 103 183-345 91-193 (198)
27 PRK09449 dUMP phosphatase; Pro 99.9 6.6E-23 1.4E-27 186.9 15.9 186 82-344 1-196 (224)
28 TIGR02254 YjjG/YfnB HAD superf 99.9 1.1E-22 2.3E-27 184.6 16.5 183 84-345 1-199 (224)
29 PF13419 HAD_2: Haloacid dehal 99.9 7.3E-23 1.6E-27 176.7 12.4 175 87-343 1-176 (176)
30 PRK14988 GMP/IMP nucleotidase; 99.9 1.3E-22 2.7E-27 186.2 13.9 105 181-345 90-195 (224)
31 PLN02919 haloacid dehalogenase 99.9 2E-21 4.3E-26 212.4 22.1 190 81-345 72-263 (1057)
32 PRK06698 bifunctional 5'-methy 99.9 1.1E-21 2.4E-26 197.9 16.1 185 84-345 241-428 (459)
33 KOG3085 Predicted hydrolase (H 99.9 1.3E-21 2.8E-26 179.1 14.0 193 80-345 3-214 (237)
34 TIGR02247 HAD-1A3-hyp Epoxide 99.9 1.4E-21 3E-26 176.7 12.8 105 181-345 91-197 (211)
35 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 2.5E-21 5.3E-26 169.9 13.6 100 183-343 84-183 (183)
36 PRK10748 flavin mononucleotide 99.9 5.9E-21 1.3E-25 176.5 15.9 186 83-345 9-209 (238)
37 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.1E-20 2.3E-25 169.5 15.7 183 85-336 1-197 (197)
38 KOG2914 Predicted haloacid-hal 99.9 3.3E-20 7.2E-25 169.0 18.3 188 82-345 8-197 (222)
39 PLN02811 hydrolase 99.9 2E-20 4.4E-25 170.7 16.8 181 91-345 1-185 (220)
40 PRK09456 ?-D-glucose-1-phospha 99.9 9.6E-21 2.1E-25 170.2 13.8 102 184-345 84-186 (199)
41 TIGR01993 Pyr-5-nucltdase pyri 99.8 4.8E-21 1.1E-25 169.7 11.4 177 86-343 2-184 (184)
42 COG1011 Predicted hydrolase (H 99.8 1.7E-20 3.6E-25 170.8 13.2 103 182-345 97-200 (229)
43 PHA02597 30.2 hypothetical pro 99.8 4E-19 8.6E-24 159.1 13.8 173 84-346 2-176 (197)
44 TIGR00338 serB phosphoserine p 99.8 2.2E-19 4.8E-24 163.1 12.2 183 81-342 11-193 (219)
45 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 6.2E-19 1.3E-23 151.4 12.2 154 86-337 1-154 (154)
46 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 3.1E-18 6.8E-23 152.7 16.2 112 183-344 79-190 (201)
47 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1.5E-19 3.2E-24 158.4 6.4 167 86-336 1-175 (175)
48 PLN02954 phosphoserine phospha 99.8 2.7E-18 5.8E-23 156.5 14.7 184 82-343 10-195 (224)
49 PRK11133 serB phosphoserine ph 99.8 2.7E-18 5.9E-23 165.5 12.3 182 82-342 108-289 (322)
50 TIGR01656 Histidinol-ppas hist 99.7 3.7E-17 8.1E-22 140.3 12.1 109 184-346 27-147 (147)
51 TIGR01691 enolase-ppase 2,3-di 99.7 2E-16 4.3E-21 144.8 17.6 189 84-345 1-197 (220)
52 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1.5E-16 3.2E-21 133.6 11.1 96 185-344 26-131 (132)
53 PRK06769 hypothetical protein; 99.7 1.5E-16 3.2E-21 140.5 10.7 107 184-346 28-139 (173)
54 TIGR01685 MDP-1 magnesium-depe 99.7 3.5E-17 7.5E-22 144.5 4.3 105 182-346 43-159 (174)
55 PRK08942 D,D-heptose 1,7-bisph 99.7 4.1E-16 8.9E-21 138.2 11.0 108 184-345 29-148 (181)
56 KOG3109 Haloacid dehalogenase- 99.7 9.9E-16 2.1E-20 136.8 13.1 178 82-345 13-206 (244)
57 TIGR01261 hisB_Nterm histidino 99.7 4.9E-16 1.1E-20 135.7 10.4 109 183-345 28-148 (161)
58 TIGR01672 AphA HAD superfamily 99.7 1.6E-15 3.6E-20 140.1 14.1 100 183-346 113-213 (237)
59 PRK09552 mtnX 2-hydroxy-3-keto 99.7 1.8E-15 3.8E-20 138.1 13.8 109 183-341 73-184 (219)
60 PRK13582 thrH phosphoserine ph 99.6 7.8E-15 1.7E-19 131.7 16.3 103 183-342 67-169 (205)
61 COG0560 SerB Phosphoserine pho 99.6 4.3E-15 9.3E-20 135.4 14.6 184 83-344 4-187 (212)
62 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 1.7E-15 3.8E-20 132.9 10.1 99 185-342 43-160 (166)
63 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.9E-14 4.1E-19 128.9 14.5 113 184-345 87-199 (202)
64 cd01427 HAD_like Haloacid deha 99.6 2.3E-14 5E-19 117.8 11.8 117 183-343 23-139 (139)
65 TIGR01489 DKMTPPase-SF 2,3-dik 99.6 3E-14 6.6E-19 125.5 12.8 115 183-340 71-185 (188)
66 TIGR02137 HSK-PSP phosphoserin 99.6 7.6E-14 1.6E-18 126.4 14.2 169 84-344 1-171 (203)
67 TIGR01488 HAD-SF-IB Haloacid D 99.6 3.5E-14 7.5E-19 124.2 11.4 106 183-336 72-177 (177)
68 TIGR03333 salvage_mtnX 2-hydro 99.5 1E-13 2.2E-18 126.1 12.6 108 183-338 69-177 (214)
69 TIGR00213 GmhB_yaeD D,D-heptos 99.5 3.5E-14 7.7E-19 125.3 9.1 115 183-345 25-152 (176)
70 COG2179 Predicted hydrolase of 99.5 6.7E-14 1.5E-18 120.5 8.7 90 186-344 48-138 (175)
71 PF00702 Hydrolase: haloacid d 99.5 2E-13 4.3E-18 122.3 11.6 88 183-337 126-215 (215)
72 PRK11590 hypothetical protein; 99.5 3E-12 6.4E-17 116.3 18.6 191 83-345 5-204 (211)
73 TIGR01452 PGP_euk phosphoglyco 99.5 3.1E-13 6.8E-18 127.9 12.2 41 306-346 208-249 (279)
74 TIGR01668 YqeG_hyp_ppase HAD s 99.5 2.5E-13 5.4E-18 119.5 9.6 95 183-346 42-138 (170)
75 TIGR01670 YrbI-phosphatas 3-de 99.4 1.6E-13 3.4E-18 118.9 7.3 82 192-343 36-117 (154)
76 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.4 9.6E-13 2.1E-17 123.3 10.3 104 186-346 122-226 (257)
77 KOG1615 Phosphoserine phosphat 99.4 4.6E-12 1E-16 111.5 13.0 119 84-233 16-136 (227)
78 PLN02645 phosphoglycolate phos 99.4 5.5E-12 1.2E-16 121.3 13.7 41 306-346 236-277 (311)
79 PRK11009 aphA acid phosphatase 99.4 5.4E-12 1.2E-16 116.7 12.3 98 183-346 113-213 (237)
80 COG0647 NagD Predicted sugar p 99.4 1.8E-12 3.9E-17 121.6 8.5 228 81-346 5-237 (269)
81 PHA02530 pseT polynucleotide k 99.3 4.3E-12 9.3E-17 120.8 8.3 112 182-346 185-298 (300)
82 PRK10444 UMP phosphatase; Prov 99.3 3.6E-11 7.8E-16 112.1 14.0 41 306-346 180-221 (248)
83 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.3 3.5E-11 7.6E-16 111.5 11.7 101 186-345 140-242 (242)
84 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.2 2.2E-10 4.7E-15 106.9 15.8 41 306-346 184-225 (249)
85 PRK08238 hypothetical protein; 99.2 1.8E-10 3.9E-15 116.7 16.1 94 182-341 70-163 (479)
86 PRK05446 imidazole glycerol-ph 99.2 2.4E-11 5.1E-16 118.5 8.9 108 183-344 29-148 (354)
87 TIGR01686 FkbH FkbH-like domai 99.2 4.6E-11 1E-15 115.4 9.2 90 185-339 32-125 (320)
88 TIGR01544 HAD-SF-IE haloacid d 99.2 7.1E-10 1.5E-14 104.5 16.5 111 181-336 118-230 (277)
89 PRK10530 pyridoxal phosphate ( 99.2 4.3E-10 9.4E-15 105.1 13.6 38 305-342 203-240 (272)
90 smart00577 CPDc catalytic doma 99.2 1.9E-11 4.1E-16 105.1 3.8 94 183-340 44-138 (148)
91 PF12689 Acid_PPase: Acid Phos 99.2 5E-11 1.1E-15 104.7 6.1 101 182-346 43-153 (169)
92 TIGR02726 phenyl_P_delta pheny 99.1 8.1E-11 1.8E-15 103.6 7.1 83 192-343 42-124 (169)
93 TIGR01681 HAD-SF-IIIC HAD-supe 99.1 7.5E-11 1.6E-15 99.0 6.3 87 185-335 30-126 (128)
94 TIGR01545 YfhB_g-proteo haloac 99.1 2.7E-09 6E-14 97.1 14.7 108 184-345 94-203 (210)
95 TIGR01663 PNK-3'Pase polynucle 99.1 3.4E-10 7.3E-15 115.6 8.8 96 185-339 198-306 (526)
96 PTZ00445 p36-lilke protein; Pr 99.0 7.3E-10 1.6E-14 99.6 9.0 52 282-345 153-206 (219)
97 TIGR01456 CECR5 HAD-superfamil 99.0 2.6E-09 5.5E-14 103.3 12.4 71 269-346 204-293 (321)
98 PF06888 Put_Phosphatase: Puta 99.0 1.1E-08 2.4E-13 94.4 15.1 115 86-232 2-118 (234)
99 TIGR01460 HAD-SF-IIA Haloacid 99.0 5.1E-09 1.1E-13 96.8 11.7 41 306-346 194-236 (236)
100 PRK09484 3-deoxy-D-manno-octul 98.9 1.8E-09 3.8E-14 96.2 7.1 81 192-341 56-136 (183)
101 PF13242 Hydrolase_like: HAD-h 98.9 6.9E-10 1.5E-14 84.3 3.7 48 285-346 3-51 (75)
102 PF09419 PGP_phosphatase: Mito 98.9 1.4E-08 3.1E-13 89.0 10.6 41 306-346 120-166 (168)
103 PRK01158 phosphoglycolate phos 98.9 2.3E-09 4.9E-14 97.9 4.8 38 305-342 161-198 (230)
104 TIGR01482 SPP-subfamily Sucros 98.8 5.6E-09 1.2E-13 94.9 6.8 38 305-342 153-190 (225)
105 PF12710 HAD: haloacid dehalog 98.8 2.6E-08 5.6E-13 87.9 10.3 39 187-228 92-130 (192)
106 TIGR02244 HAD-IG-Ncltidse HAD 98.8 1.8E-08 3.8E-13 97.9 9.3 130 183-344 183-323 (343)
107 TIGR01533 lipo_e_P4 5'-nucleot 98.8 5.2E-08 1.1E-12 91.7 11.7 48 182-229 116-163 (266)
108 PRK00192 mannosyl-3-phosphogly 98.8 6.9E-08 1.5E-12 91.0 12.4 38 305-342 194-232 (273)
109 PRK15126 thiamin pyrimidine py 98.8 5.8E-09 1.3E-13 98.0 4.0 38 305-342 192-229 (272)
110 KOG2882 p-Nitrophenyl phosphat 98.7 4.2E-08 9.1E-13 92.2 9.2 155 183-346 108-271 (306)
111 PRK10513 sugar phosphate phosp 98.7 1.1E-08 2.5E-13 95.7 4.8 38 305-342 200-237 (270)
112 TIGR01487 SPP-like sucrose-pho 98.7 6E-09 1.3E-13 94.5 2.0 38 305-342 151-188 (215)
113 COG0241 HisB Histidinol phosph 98.7 3E-08 6.4E-13 87.8 6.3 108 183-345 30-150 (181)
114 COG4229 Predicted enolase-phos 98.7 2.7E-07 5.8E-12 80.9 11.6 104 182-344 101-204 (229)
115 TIGR02463 MPGP_rel mannosyl-3- 98.7 1.6E-06 3.4E-11 78.8 16.8 38 305-342 183-220 (221)
116 KOG3120 Predicted haloacid deh 98.6 1E-06 2.2E-11 79.5 14.9 120 83-236 12-133 (256)
117 COG0561 Cof Predicted hydrolas 98.6 4.5E-08 9.7E-13 91.5 6.1 38 305-342 193-230 (264)
118 COG4359 Uncharacterized conser 98.6 3E-07 6.6E-12 80.7 10.2 55 182-239 71-126 (220)
119 KOG3040 Predicted sugar phosph 98.6 1.9E-07 4.1E-12 83.4 9.0 149 185-346 24-228 (262)
120 PRK10976 putative hydrolase; P 98.5 9.7E-08 2.1E-12 89.3 5.8 38 305-342 194-231 (266)
121 TIGR00099 Cof-subfamily Cof su 98.5 4.3E-07 9.3E-12 84.5 8.3 38 305-342 192-229 (256)
122 PRK03669 mannosyl-3-phosphogly 98.4 7.3E-07 1.6E-11 83.9 9.0 38 305-342 191-231 (271)
123 PLN02887 hydrolase family prot 98.4 6.9E-08 1.5E-12 100.0 2.1 38 305-342 511-548 (580)
124 TIGR01512 ATPase-IB2_Cd heavy 98.4 4.9E-07 1.1E-11 93.3 8.0 87 183-340 361-448 (536)
125 TIGR01684 viral_ppase viral ph 98.4 4.3E-07 9.3E-12 86.0 6.8 48 186-236 148-195 (301)
126 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.4 1E-06 2.2E-11 81.7 9.0 91 183-338 23-116 (242)
127 TIGR01525 ATPase-IB_hvy heavy 98.4 7.6E-07 1.7E-11 92.3 8.1 88 183-341 383-471 (556)
128 TIGR02461 osmo_MPG_phos mannos 98.3 9.4E-07 2E-11 81.3 6.0 38 305-342 185-224 (225)
129 TIGR02251 HIF-SF_euk Dullard-l 98.3 2.6E-07 5.6E-12 80.7 2.1 96 183-342 41-137 (162)
130 TIGR01511 ATPase-IB1_Cu copper 98.2 1.8E-06 3.9E-11 89.7 6.7 42 183-227 404-445 (562)
131 TIGR01485 SPP_plant-cyano sucr 98.2 2.4E-05 5.1E-10 72.7 12.4 41 305-345 171-211 (249)
132 PRK14502 bifunctional mannosyl 98.1 1.5E-05 3.3E-10 83.3 11.1 38 305-342 617-656 (694)
133 TIGR01486 HAD-SF-IIB-MPGP mann 98.1 3.1E-05 6.6E-10 72.2 11.3 38 305-342 180-219 (256)
134 PRK10671 copA copper exporting 98.1 9.3E-06 2E-10 88.1 8.7 89 183-342 649-737 (834)
135 PF08645 PNK3P: Polynucleotide 98.1 7.3E-06 1.6E-10 71.4 6.3 98 185-341 30-153 (159)
136 PHA03398 viral phosphatase sup 98.1 8.3E-06 1.8E-10 77.4 6.9 49 186-237 150-198 (303)
137 TIGR01675 plant-AP plant acid 98.1 5.6E-05 1.2E-09 69.6 12.1 48 181-228 117-164 (229)
138 PF11019 DUF2608: Protein of u 98.1 4.8E-05 1E-09 71.2 11.7 115 184-344 81-209 (252)
139 PF03767 Acid_phosphat_B: HAD 98.0 1.1E-05 2.4E-10 74.4 6.4 46 183-228 114-159 (229)
140 PLN02382 probable sucrose-phos 98.0 2.3E-05 5E-10 78.5 8.5 40 305-344 179-221 (413)
141 COG1778 Low specificity phosph 97.9 2E-05 4.4E-10 67.7 6.4 81 193-342 44-124 (170)
142 PLN02177 glycerol-3-phosphate 97.9 0.00074 1.6E-08 69.1 17.3 100 185-342 111-213 (497)
143 PRK11033 zntA zinc/cadmium/mer 97.9 5E-05 1.1E-09 81.4 9.1 42 184-228 568-609 (741)
144 PF06941 NT5C: 5' nucleotidase 97.8 5.5E-05 1.2E-09 67.5 6.8 29 182-210 71-99 (191)
145 smart00775 LNS2 LNS2 domain. T 97.8 0.00034 7.4E-09 60.8 11.0 39 185-223 28-66 (157)
146 TIGR01522 ATPase-IIA2_Ca golgi 97.7 7E-05 1.5E-09 81.8 8.1 114 184-341 528-641 (884)
147 PRK12702 mannosyl-3-phosphogly 97.7 0.00011 2.3E-09 69.9 7.2 37 306-342 213-251 (302)
148 COG4996 Predicted phosphatase 97.7 0.00013 2.8E-09 61.0 6.7 50 182-234 39-88 (164)
149 TIGR01680 Veg_Stor_Prot vegeta 97.7 0.00048 1E-08 64.8 11.3 48 181-228 142-189 (275)
150 TIGR01497 kdpB K+-transporting 97.6 0.00014 3.1E-09 76.8 6.8 44 184-230 446-489 (675)
151 COG2217 ZntA Cation transport 97.4 0.00034 7.5E-09 74.2 7.6 45 183-230 536-580 (713)
152 KOG2630 Enolase-phosphatase E- 97.4 0.0058 1.3E-07 55.8 14.3 103 183-344 122-224 (254)
153 PRK14010 potassium-transportin 97.4 0.00033 7.1E-09 74.1 7.3 44 184-230 441-484 (673)
154 PRK01122 potassium-transportin 97.4 0.00039 8.4E-09 73.6 7.1 44 184-230 445-488 (679)
155 PRK10187 trehalose-6-phosphate 97.4 0.0015 3.4E-08 61.5 10.5 32 305-336 178-209 (266)
156 TIGR01116 ATPase-IIA1_Ca sarco 97.3 0.00061 1.3E-08 74.8 8.6 42 184-228 537-578 (917)
157 PF05761 5_nucleotid: 5' nucle 97.3 0.0005 1.1E-08 69.4 6.5 128 183-344 182-324 (448)
158 TIGR02250 FCP1_euk FCP1-like p 97.2 0.00062 1.3E-08 59.2 5.8 51 183-237 57-108 (156)
159 PF13344 Hydrolase_6: Haloacid 97.1 0.0035 7.6E-08 50.3 8.4 45 184-228 14-58 (101)
160 COG4087 Soluble P-type ATPase 97.0 0.0041 8.9E-08 52.1 8.2 92 182-343 28-119 (152)
161 COG0474 MgtA Cation transport 97.0 0.0025 5.4E-08 70.1 8.9 118 183-343 546-664 (917)
162 PF08235 LNS2: LNS2 (Lipin/Ned 97.0 0.011 2.3E-07 51.5 11.0 40 185-224 28-67 (157)
163 TIGR01524 ATPase-IIIB_Mg magne 97.0 0.003 6.4E-08 69.1 9.1 41 184-227 515-555 (867)
164 COG3700 AphA Acid phosphatase 96.9 0.0086 1.9E-07 52.8 9.8 27 318-344 185-211 (237)
165 PRK10517 magnesium-transportin 96.9 0.0041 8.8E-08 68.3 9.2 41 184-227 550-590 (902)
166 PRK15122 magnesium-transportin 96.8 0.0044 9.5E-08 68.1 9.3 41 184-227 550-590 (903)
167 TIGR01647 ATPase-IIIA_H plasma 96.8 0.0041 8.8E-08 67.1 8.6 42 184-228 442-483 (755)
168 COG2503 Predicted secreted aci 96.8 0.012 2.6E-07 54.3 10.1 46 183-228 121-167 (274)
169 TIGR01517 ATPase-IIB_Ca plasma 96.7 0.0039 8.5E-08 68.8 7.7 42 184-228 579-620 (941)
170 TIGR01523 ATPase-IID_K-Na pota 96.7 0.0049 1.1E-07 68.7 8.3 42 183-227 645-686 (1053)
171 TIGR01484 HAD-SF-IIB HAD-super 96.6 0.0029 6.3E-08 56.5 4.8 38 305-342 167-204 (204)
172 PF08282 Hydrolase_3: haloacid 96.5 0.0029 6.4E-08 57.2 4.2 38 305-342 190-227 (254)
173 TIGR02471 sucr_syn_bact_C sucr 96.4 0.003 6.6E-08 58.0 3.7 38 305-342 163-200 (236)
174 KOG0207 Cation transport ATPas 96.4 0.01 2.2E-07 63.6 7.8 43 183-228 722-764 (951)
175 COG0647 NagD Predicted sugar p 96.2 0.035 7.7E-07 52.5 10.0 51 182-232 22-73 (269)
176 COG4030 Uncharacterized protei 96.2 0.13 2.7E-06 47.3 12.8 130 182-337 81-226 (315)
177 TIGR01106 ATPase-IIC_X-K sodiu 96.0 0.022 4.7E-07 63.4 8.6 41 184-227 568-608 (997)
178 PLN02499 glycerol-3-phosphate 96.0 0.052 1.1E-06 55.2 10.4 52 192-252 101-155 (498)
179 COG5610 Predicted hydrolase (H 95.9 0.037 8E-07 55.4 8.6 101 183-341 98-199 (635)
180 TIGR01657 P-ATPase-V P-type AT 95.8 0.035 7.6E-07 62.1 9.3 41 184-227 656-696 (1054)
181 TIGR01452 PGP_euk phosphoglyco 95.8 0.069 1.5E-06 50.5 10.1 44 185-228 19-62 (279)
182 TIGR01494 ATPase_P-type ATPase 95.8 0.059 1.3E-06 55.2 10.0 40 184-226 347-386 (499)
183 PF08282 Hydrolase_3: haloacid 95.6 0.024 5.2E-07 51.1 5.9 36 189-227 20-55 (254)
184 PLN02205 alpha,alpha-trehalose 95.5 0.11 2.5E-06 56.7 11.6 32 306-337 767-801 (854)
185 TIGR01652 ATPase-Plipid phosph 95.4 0.05 1.1E-06 60.9 8.4 42 183-227 630-671 (1057)
186 KOG0202 Ca2+ transporting ATPa 95.3 0.067 1.4E-06 57.2 8.4 43 183-228 583-625 (972)
187 PF05116 S6PP: Sucrose-6F-phos 95.2 0.02 4.4E-07 53.3 4.0 40 305-345 169-208 (247)
188 TIGR00685 T6PP trehalose-phosp 95.2 0.031 6.7E-07 51.8 5.2 39 305-343 171-216 (244)
189 KOG0206 P-type ATPase [General 94.7 0.092 2E-06 58.5 7.7 44 182-228 649-692 (1151)
190 PF05152 DUF705: Protein of un 94.6 0.1 2.2E-06 49.4 6.8 49 186-237 144-192 (297)
191 PLN03190 aminophospholipid tra 94.5 0.27 6E-06 55.6 11.1 42 183-227 725-766 (1178)
192 PTZ00174 phosphomannomutase; P 94.3 0.036 7.8E-07 51.4 3.2 37 305-345 192-232 (247)
193 KOG1618 Predicted phosphatase 94.3 0.35 7.6E-06 46.6 9.6 35 64-100 17-51 (389)
194 COG5663 Uncharacterized conser 94.3 0.38 8.3E-06 42.2 9.1 32 310-345 130-162 (194)
195 KOG2961 Predicted hydrolase (H 93.9 0.43 9.3E-06 41.3 8.6 31 315-345 137-168 (190)
196 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.8 0.4 8.6E-06 44.6 9.1 50 185-234 18-67 (249)
197 PF13344 Hydrolase_6: Haloacid 93.7 0.2 4.3E-06 40.1 6.0 32 87-118 1-33 (101)
198 PF03031 NIF: NLI interacting 93.5 0.068 1.5E-06 45.9 3.2 48 183-234 35-83 (159)
199 PRK10444 UMP phosphatase; Prov 93.2 0.57 1.2E-05 43.7 9.2 43 185-227 18-60 (248)
200 PF05822 UMPH-1: Pyrimidine 5' 92.9 0.66 1.4E-05 43.3 8.9 57 177-237 83-139 (246)
201 COG2216 KdpB High-affinity K+ 92.7 0.17 3.8E-06 51.5 5.1 43 185-230 448-490 (681)
202 PLN02423 phosphomannomutase 92.2 0.13 2.7E-06 47.9 3.3 35 310-345 194-232 (245)
203 KOG2470 Similar to IMP-GMP spe 92.0 0.25 5.4E-06 48.1 4.9 129 185-343 241-374 (510)
204 COG1778 Low specificity phosph 91.7 0.23 5.1E-06 43.0 4.0 61 82-154 6-78 (170)
205 COG3769 Predicted hydrolase (H 91.6 0.3 6.5E-06 44.8 4.8 22 316-337 207-229 (274)
206 TIGR01458 HAD-SF-IIA-hyp3 HAD- 91.5 0.4 8.6E-06 44.8 5.8 43 185-227 22-64 (257)
207 KOG2116 Protein involved in pl 91.1 0.77 1.7E-05 48.0 7.7 41 188-228 562-602 (738)
208 TIGR02245 HAD_IIID1 HAD-superf 90.6 0.82 1.8E-05 41.2 6.7 39 185-227 46-84 (195)
209 TIGR01681 HAD-SF-IIIC HAD-supe 90.5 0.32 7E-06 40.4 3.7 15 85-99 1-15 (128)
210 TIGR01460 HAD-SF-IIA Haloacid 90.0 3.5 7.5E-05 37.9 10.6 49 184-232 14-63 (236)
211 COG1877 OtsB Trehalose-6-phosp 89.8 1.9 4.2E-05 40.7 8.7 32 306-337 187-218 (266)
212 KOG2134 Polynucleotide kinase 89.6 0.63 1.4E-05 45.9 5.4 25 185-209 105-129 (422)
213 TIGR01689 EcbF-BcbF capsule bi 89.4 0.2 4.4E-06 41.9 1.6 25 185-209 25-49 (126)
214 PTZ00174 phosphomannomutase; P 89.0 0.44 9.5E-06 44.1 3.8 36 81-117 2-40 (247)
215 KOG0204 Calcium transporting A 88.7 1.8 3.9E-05 46.8 8.3 42 183-227 646-687 (1034)
216 PLN02423 phosphomannomutase 88.7 0.47 1E-05 44.0 3.8 31 82-113 4-35 (245)
217 PRK14501 putative bifunctional 86.9 1.1 2.4E-05 48.2 5.8 31 305-337 661-691 (726)
218 PLN03017 trehalose-phosphatase 86.3 1.6 3.4E-05 43.2 6.0 32 305-336 287-321 (366)
219 COG5083 SMP2 Uncharacterized p 85.6 3 6.5E-05 41.9 7.4 35 305-339 481-516 (580)
220 PRK09484 3-deoxy-D-manno-octul 85.4 0.44 9.5E-06 42.1 1.5 16 83-98 20-35 (183)
221 KOG0210 P-type ATPase [Inorgan 85.2 5.9 0.00013 42.2 9.6 27 182-208 656-682 (1051)
222 KOG4549 Magnesium-dependent ph 84.5 3.9 8.4E-05 34.3 6.5 44 183-228 43-86 (144)
223 KOG2882 p-Nitrophenyl phosphat 84.2 9.2 0.0002 36.7 9.8 45 184-228 38-82 (306)
224 TIGR02726 phenyl_P_delta pheny 83.8 0.58 1.3E-05 41.1 1.5 17 83-99 6-22 (169)
225 TIGR01658 EYA-cons_domain eyes 83.8 7 0.00015 36.5 8.5 40 306-345 219-258 (274)
226 PRK00192 mannosyl-3-phosphogly 83.1 1.8 3.9E-05 40.6 4.7 41 186-229 23-63 (273)
227 TIGR00213 GmhB_yaeD D,D-heptos 81.1 1.4 3.1E-05 38.4 3.0 13 85-97 2-14 (176)
228 PLN02580 trehalose-phosphatase 81.1 3.3 7.1E-05 41.2 5.8 32 305-336 305-339 (384)
229 PF03031 NIF: NLI interacting 79.9 0.92 2E-05 38.7 1.3 16 85-100 1-16 (159)
230 KOG3128 Uncharacterized conser 78.8 3 6.6E-05 39.1 4.4 44 182-228 136-180 (298)
231 KOG2469 IMP-GMP specific 5'-nu 78.7 3.5 7.7E-05 41.0 5.1 129 187-343 201-332 (424)
232 COG0731 Fe-S oxidoreductases [ 78.7 5.2 0.00011 38.4 6.1 44 180-229 88-132 (296)
233 TIGR02471 sucr_syn_bact_C sucr 78.6 1.7 3.8E-05 39.6 2.8 15 86-100 1-15 (236)
234 TIGR02463 MPGP_rel mannosyl-3- 78.4 3.4 7.5E-05 37.1 4.7 36 189-227 21-56 (221)
235 TIGR02461 osmo_MPG_phos mannos 77.5 4.1 8.9E-05 37.2 4.9 40 186-228 17-56 (225)
236 TIGR01487 SPP-like sucrose-pho 77.2 3.7 8E-05 36.8 4.5 41 185-228 19-59 (215)
237 PF08645 PNK3P: Polynucleotide 77.0 1.3 2.8E-05 38.5 1.3 16 85-100 1-16 (159)
238 TIGR01456 CECR5 HAD-superfamil 76.7 15 0.00034 35.3 9.0 43 185-227 17-64 (321)
239 COG3882 FkbH Predicted enzyme 75.4 12 0.00027 38.2 7.9 93 185-338 256-348 (574)
240 KOG0209 P-type ATPase [Inorgan 74.7 8 0.00017 42.0 6.6 42 183-227 674-715 (1160)
241 PRK01158 phosphoglycolate phos 74.0 5.1 0.00011 36.0 4.6 41 185-228 21-61 (230)
242 PF06506 PrpR_N: Propionate ca 73.9 8.8 0.00019 33.6 5.9 26 320-346 127-152 (176)
243 TIGR00099 Cof-subfamily Cof su 73.4 5.5 0.00012 36.6 4.8 40 185-227 17-56 (256)
244 PRK15126 thiamin pyrimidine py 73.1 5.1 0.00011 37.3 4.5 41 185-228 20-60 (272)
245 PRK10513 sugar phosphate phosp 73.1 5.7 0.00012 36.8 4.8 41 185-228 21-61 (270)
246 PRK10976 putative hydrolase; P 72.9 5.4 0.00012 36.9 4.6 41 185-228 20-60 (266)
247 COG0561 Cof Predicted hydrolas 72.0 6.4 0.00014 36.4 4.8 43 183-228 19-61 (264)
248 PRK10530 pyridoxal phosphate ( 71.4 7.5 0.00016 35.9 5.2 41 185-228 21-61 (272)
249 TIGR00685 T6PP trehalose-phosp 71.1 2.5 5.3E-05 39.0 1.8 16 83-98 2-17 (244)
250 TIGR02329 propionate_PrpR prop 69.6 37 0.00081 35.3 10.2 38 188-227 85-122 (526)
251 TIGR01486 HAD-SF-IIB-MPGP mann 69.6 8.2 0.00018 35.6 5.0 37 188-227 20-56 (256)
252 cd04728 ThiG Thiazole synthase 68.9 40 0.00088 31.5 9.2 97 182-345 102-205 (248)
253 TIGR01482 SPP-subfamily Sucros 68.8 7.9 0.00017 34.6 4.6 41 185-228 16-56 (225)
254 KOG0323 TFIIF-interacting CTD 67.8 7.4 0.00016 41.1 4.6 53 183-239 200-253 (635)
255 PRK03669 mannosyl-3-phosphogly 67.2 8.9 0.00019 35.8 4.7 38 187-227 27-64 (271)
256 PRK00208 thiG thiazole synthas 67.1 47 0.001 31.1 9.3 97 182-345 102-205 (250)
257 PRK12702 mannosyl-3-phosphogly 65.7 9.5 0.00021 36.7 4.6 39 187-228 21-59 (302)
258 TIGR01668 YqeG_hyp_ppase HAD s 65.3 6 0.00013 34.4 3.0 36 82-117 23-61 (170)
259 PRK00994 F420-dependent methyl 65.3 53 0.0012 30.6 9.0 37 306-345 79-117 (277)
260 PF06189 5-nucleotidase: 5'-nu 65.1 55 0.0012 30.9 9.3 26 320-346 235-260 (264)
261 PRK14501 putative bifunctional 64.9 8.5 0.00018 41.5 4.6 36 185-223 515-551 (726)
262 COG4502 5'(3')-deoxyribonucleo 64.6 7.4 0.00016 33.4 3.2 50 183-233 67-119 (180)
263 KOG0203 Na+/K+ ATPase, alpha s 64.1 21 0.00046 39.0 7.1 41 183-226 589-629 (1019)
264 PHA02530 pseT polynucleotide k 63.5 28 0.00061 32.7 7.4 17 83-99 157-173 (300)
265 TIGR01689 EcbF-BcbF capsule bi 63.3 13 0.00027 31.1 4.4 15 84-98 1-15 (126)
266 PRK13762 tRNA-modifying enzyme 61.1 29 0.00063 33.6 7.1 29 181-209 139-167 (322)
267 PF05116 S6PP: Sucrose-6F-phos 59.6 6.4 0.00014 36.5 2.2 39 189-227 133-180 (247)
268 TIGR03470 HpnH hopanoid biosyn 59.2 40 0.00087 32.5 7.7 29 181-209 81-109 (318)
269 TIGR02245 HAD_IIID1 HAD-superf 59.1 7 0.00015 35.2 2.3 18 82-99 19-36 (195)
270 PRK15424 propionate catabolism 56.8 82 0.0018 32.9 9.9 38 188-227 95-132 (538)
271 TIGR02468 sucrsPsyn_pln sucros 56.3 11 0.00024 42.2 3.7 40 304-344 959-1001(1050)
272 PLN02580 trehalose-phosphatase 56.0 17 0.00036 36.3 4.5 16 84-99 119-134 (384)
273 KOG3189 Phosphomannomutase [Li 56.0 12 0.00025 34.1 3.1 30 84-114 11-40 (252)
274 PLN02151 trehalose-phosphatase 55.7 10 0.00023 37.3 3.0 32 305-336 273-307 (354)
275 smart00577 CPDc catalytic doma 55.3 7.7 0.00017 32.8 1.8 15 85-99 3-17 (148)
276 PF04007 DUF354: Protein of un 51.7 90 0.002 30.5 8.8 98 190-328 17-114 (335)
277 TIGR02251 HIF-SF_euk Dullard-l 50.7 9 0.00019 33.1 1.5 16 85-100 2-17 (162)
278 KOG3107 Predicted haloacid deh 50.5 2.5E+02 0.0054 28.2 11.3 38 306-344 414-451 (468)
279 TIGR01484 HAD-SF-IIB HAD-super 50.3 24 0.00053 31.0 4.3 37 185-224 18-54 (204)
280 PRK08005 epimerase; Validated 48.8 1.4E+02 0.0031 27.1 9.1 24 186-209 92-115 (210)
281 PRK11840 bifunctional sulfur c 48.5 2E+02 0.0044 28.0 10.5 36 306-345 241-279 (326)
282 TIGR02826 RNR_activ_nrdG3 anae 47.5 27 0.00059 29.8 4.0 25 185-209 73-97 (147)
283 TIGR02250 FCP1_euk FCP1-like p 47.1 12 0.00027 32.2 1.8 19 83-101 5-23 (156)
284 COG1817 Uncharacterized protei 46.2 1E+02 0.0023 30.0 7.9 101 188-328 15-115 (346)
285 cd00733 GlyRS_alpha_core Class 45.0 23 0.00049 33.2 3.2 48 291-341 79-129 (279)
286 TIGR02495 NrdG2 anaerobic ribo 44.3 61 0.0013 28.2 5.9 28 182-209 72-99 (191)
287 PRK09348 glyQ glycyl-tRNA synt 42.6 25 0.00054 33.0 3.1 48 291-341 83-133 (283)
288 KOG2832 TFIIF-interacting CTD 41.4 36 0.00079 33.6 4.2 51 183-237 213-263 (393)
289 PLN02887 hydrolase family prot 41.0 37 0.0008 35.8 4.5 41 184-227 325-365 (580)
290 KOG1618 Predicted phosphatase 41.0 34 0.00074 33.3 3.8 41 306-346 284-342 (389)
291 TIGR00388 glyQ glycyl-tRNA syn 40.2 30 0.00065 32.6 3.3 48 291-341 80-130 (293)
292 PF04123 DUF373: Domain of unk 38.5 1.1E+02 0.0024 30.1 7.1 24 306-331 90-113 (344)
293 PF02254 TrkA_N: TrkA-N domain 37.5 2E+02 0.0043 22.5 8.9 27 318-344 90-116 (116)
294 CHL00162 thiG thiamin biosynth 36.9 3.3E+02 0.0072 25.8 9.5 98 182-345 116-219 (267)
295 PF05728 UPF0227: Uncharacteri 36.6 1.7E+02 0.0037 26.0 7.5 71 272-344 14-88 (187)
296 COG0036 Rpe Pentose-5-phosphat 35.3 3.6E+02 0.0078 24.8 10.7 42 183-225 92-133 (220)
297 TIGR01485 SPP_plant-cyano sucr 34.9 41 0.00088 30.8 3.4 38 187-227 24-61 (249)
298 cd07043 STAS_anti-anti-sigma_f 34.1 76 0.0016 23.8 4.3 36 191-231 61-96 (99)
299 PRK08745 ribulose-phosphate 3- 33.7 3.4E+02 0.0073 24.9 9.2 24 186-209 96-119 (223)
300 cd01766 Ufm1 Urm1-like ubiquit 33.4 58 0.0013 24.7 3.3 43 294-339 23-65 (82)
301 PRK05446 imidazole glycerol-ph 33.2 50 0.0011 32.5 3.8 16 84-99 2-17 (354)
302 COG2099 CobK Precorrin-6x redu 32.8 2E+02 0.0043 27.1 7.4 54 183-242 111-164 (257)
303 PRK10187 trehalose-6-phosphate 32.8 54 0.0012 30.7 3.9 39 184-225 36-75 (266)
304 KOG4380 Carnitine deficiency a 32.4 2.5E+02 0.0055 25.3 7.6 98 135-234 54-151 (244)
305 PF05690 ThiG: Thiazole biosyn 32.1 3.7E+02 0.008 25.2 8.9 98 182-345 102-205 (247)
306 PF02358 Trehalose_PPase: Treh 31.9 22 0.00047 32.4 1.0 35 305-339 169-206 (235)
307 PRK09482 flap endonuclease-lik 31.9 8.3 0.00018 36.2 -1.8 32 307-338 157-192 (256)
308 PRK14502 bifunctional mannosyl 31.5 67 0.0014 34.6 4.6 39 187-228 436-474 (694)
309 PRK10076 pyruvate formate lyas 31.3 70 0.0015 29.1 4.2 27 183-209 49-76 (213)
310 COG0241 HisB Histidinol phosph 29.4 36 0.00079 30.3 2.0 17 84-100 5-21 (181)
311 TIGR02109 PQQ_syn_pqqE coenzym 28.9 1E+02 0.0022 29.9 5.2 46 181-227 62-107 (358)
312 COG0263 ProB Glutamate 5-kinas 28.8 1.9E+02 0.0041 28.6 6.8 34 189-228 33-66 (369)
313 TIGR03365 Bsubt_queE 7-cyano-7 28.8 48 0.0011 30.5 2.8 28 182-209 82-109 (238)
314 PRK08883 ribulose-phosphate 3- 28.6 4.5E+02 0.0098 23.9 9.9 37 185-222 91-127 (220)
315 cd05008 SIS_GlmS_GlmD_1 SIS (S 28.5 67 0.0014 25.7 3.3 24 186-209 59-82 (126)
316 PF04413 Glycos_transf_N: 3-De 28.4 60 0.0013 28.8 3.2 24 307-330 161-184 (186)
317 TIGR00377 ant_ant_sig anti-ant 28.2 1E+02 0.0022 23.8 4.3 37 191-232 66-102 (108)
318 cd05014 SIS_Kpsf KpsF-like pro 27.9 58 0.0013 26.2 2.8 24 186-209 60-83 (128)
319 smart00475 53EXOc 5'-3' exonuc 27.8 6.4 0.00014 37.0 -3.3 33 306-338 160-196 (259)
320 COG2237 Predicted membrane pro 27.7 1.7E+02 0.0038 28.9 6.4 20 190-209 54-75 (364)
321 PF07859 Abhydrolase_3: alpha/ 27.2 52 0.0011 28.7 2.6 35 294-328 44-81 (211)
322 TIGR02886 spore_II_AA anti-sig 26.9 1.2E+02 0.0026 23.5 4.5 36 191-231 62-97 (106)
323 PRK13717 conjugal transfer pro 26.9 1.1E+02 0.0023 25.7 4.1 14 82-95 43-56 (128)
324 COG4850 Uncharacterized conser 26.8 3E+02 0.0066 27.0 7.7 30 182-211 194-224 (373)
325 COG3882 FkbH Predicted enzyme 26.7 38 0.00081 34.9 1.7 17 81-97 219-235 (574)
326 PRK13125 trpA tryptophan synth 26.5 3.7E+02 0.008 24.6 8.3 23 187-209 116-138 (244)
327 PF03671 Ufm1: Ubiquitin fold 26.4 21 0.00046 26.8 -0.1 38 294-334 23-60 (76)
328 PRK05301 pyrroloquinoline quin 26.3 1.2E+02 0.0027 29.6 5.3 46 181-227 71-116 (378)
329 PF02350 Epimerase_2: UDP-N-ac 26.3 2.6E+02 0.0057 27.2 7.6 25 320-345 260-285 (346)
330 PRK10537 voltage-gated potassi 25.8 6.5E+02 0.014 25.1 10.3 34 310-344 323-356 (393)
331 COG0752 GlyQ Glycyl-tRNA synth 25.2 72 0.0016 29.9 3.1 47 292-341 85-134 (298)
332 KOG1515 Arylacetamide deacetyl 24.6 1.2E+02 0.0026 29.7 4.8 38 294-331 138-180 (336)
333 PLN03063 alpha,alpha-trehalose 24.5 46 0.001 36.4 2.0 15 84-98 507-521 (797)
334 PF02358 Trehalose_PPase: Treh 24.2 1.2E+02 0.0026 27.4 4.5 13 88-100 1-13 (235)
335 cd04795 SIS SIS domain. SIS (S 24.2 70 0.0015 23.5 2.5 22 186-207 60-81 (87)
336 PF14336 DUF4392: Domain of un 23.8 1.1E+02 0.0023 29.4 4.1 40 186-227 62-101 (291)
337 PLN03064 alpha,alpha-trehalose 23.5 46 0.001 37.1 1.8 16 83-98 590-605 (934)
338 PRK09722 allulose-6-phosphate 23.4 5.9E+02 0.013 23.4 9.5 22 188-209 96-117 (229)
339 KOG0391 SNF2 family DNA-depend 23.4 1.7E+02 0.0036 33.9 5.8 20 190-209 1266-1285(1958)
340 PF06014 DUF910: Bacterial pro 23.4 58 0.0013 23.8 1.7 25 306-334 7-31 (62)
341 PRK11145 pflA pyruvate formate 23.2 1.2E+02 0.0025 27.7 4.2 28 182-209 80-108 (246)
342 TIGR02493 PFLA pyruvate format 23.2 1.4E+02 0.003 26.9 4.7 28 182-209 75-103 (235)
343 PF01740 STAS: STAS domain; I 22.4 1.1E+02 0.0025 24.0 3.6 36 190-230 70-105 (117)
344 PRK08091 ribulose-phosphate 3- 22.3 3.6E+02 0.0079 24.8 7.2 24 186-209 102-127 (228)
345 KOG1605 TFIIF-interacting CTD 22.2 74 0.0016 30.1 2.7 39 184-226 131-169 (262)
346 cd05017 SIS_PGI_PMI_1 The memb 21.8 1.3E+02 0.0028 24.1 3.8 23 186-208 56-78 (119)
347 TIGR03278 methan_mark_10 putat 21.7 1.6E+02 0.0034 29.7 5.0 28 182-209 84-112 (404)
348 PF01381 HTH_3: Helix-turn-hel 21.5 46 0.001 22.6 0.9 38 267-318 16-53 (55)
349 cd06831 PLPDE_III_ODC_like_AZI 21.5 8E+02 0.017 24.3 10.1 32 312-343 75-108 (394)
350 cd04906 ACT_ThrD-I_1 First of 21.4 1.6E+02 0.0034 22.3 4.0 21 188-208 54-74 (85)
351 COG2044 Predicted peroxiredoxi 21.1 1.2E+02 0.0027 25.1 3.5 26 183-208 58-83 (120)
352 cd05710 SIS_1 A subgroup of th 21.0 1.1E+02 0.0023 24.7 3.2 24 186-209 60-83 (120)
353 PF03033 Glyco_transf_28: Glyc 20.9 1.4E+02 0.003 24.1 3.9 31 191-227 17-47 (139)
354 COG0381 WecB UDP-N-acetylgluco 20.2 5.9E+02 0.013 25.5 8.6 39 191-232 21-64 (383)
355 KOG1605 TFIIF-interacting CTD 20.1 23 0.00049 33.5 -1.2 18 82-99 87-104 (262)
356 TIGR00715 precor6x_red precorr 20.1 7.1E+02 0.015 23.2 8.9 17 328-344 214-230 (256)
No 1
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.95 E-value=8.5e-27 Score=213.53 Aligned_cols=186 Identities=23% Similarity=0.323 Sum_probs=139.4
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++|||||||||+|+++. +.++|.++++++|+. .+.+.+....+ +...+....+........... .
T Consensus 2 ~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~-~------ 67 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHG---GGIARIIDLLRKLAAGEDPAD-L------ 67 (221)
T ss_pred CcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHC---CChHHHHHHHHHHhcCCcccC-H------
Confidence 689999999999999997 889999999999997 55555555543 233343334444433221111 0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
........... .......++.||+.++|+.|+++|+++++.|+ +.+..++..+..+|+.++|+..+.+.
T Consensus 68 ~~~~~~~~~~~--~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~v~~~------ 136 (221)
T COG0637 68 AELERLLYEAE--ALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVIVTAD------ 136 (221)
T ss_pred HHHHHHHHHHH--HhhhcCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchhccHH------
Confidence 01111111111 12234578999999999999999999999999 66788999999999999887743332
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
++..+ ||+|++ |..++++||+.|++||+|
T Consensus 137 ---------dv~~~----------------------------KP~Pd~--------------yL~Aa~~Lgv~P~~Cvvi 165 (221)
T COG0637 137 ---------DVARG----------------------------KPAPDI--------------YLLAAERLGVDPEECVVV 165 (221)
T ss_pred ---------HHhcC----------------------------CCCCHH--------------HHHHHHHcCCChHHeEEE
Confidence 22222 899999 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|+.++|.+|++|||.+|++++
T Consensus 166 EDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 166 EDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred ecchhHHHHHHHCCCEEEEecC
Confidence 9999999999999999999975
No 2
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.94 E-value=1.8e-25 Score=203.19 Aligned_cols=187 Identities=16% Similarity=0.168 Sum_probs=140.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHH-HHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
+|+||||+||||+|+... +..+|.++++++|++ .+...+.. +.+ .....+.+.+....+.+ ..+
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~----~~~---- 65 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLS---PTPEEVQSAWMG---QSKIEAIRALLALDGAD----EAE---- 65 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCC---CCHHHHHHhhcC---CCHHHHHHHHHhccCCC----HHH----
Confidence 479999999999999986 889999999999997 33333333 332 23344444555544432 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhheecchhhH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEV 240 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~e~ 240 (346)
.+.+...+.+.+.........+++||+.++|+.|+++|++++|+|| +....+..+++.+|+. .+|+..+.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~~f~~i~~~~--- 139 (220)
T TIGR03351 66 AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTG---FDRDTAERLLEKLGWTVGDDVDAVVCPS--- 139 (220)
T ss_pred HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHhhhhhhccCCEEEcCC---
Confidence 2344455555555544334568999999999999999999999999 6788899999999998 8887643322
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC-CCc
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRN 319 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~-p~e 319 (346)
.+.. .||+|++ |+.+++++|+. |++
T Consensus 140 ------------~~~~----------------------------~KP~p~~--------------~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 140 ------------DVAA----------------------------GRPAPDL--------------ILRAMELTGVQDVQS 165 (220)
T ss_pred ------------cCCC----------------------------CCCCHHH--------------HHHHHHHcCCCChhH
Confidence 1111 2788887 99999999997 799
Q ss_pred EEEEcCChhhHHHHHHcCCCE-EEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPC-VVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~-i~v~~ 345 (346)
|+||||+..|+.+|+++||.+ |++++
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~ 192 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLT 192 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence 999999999999999999999 88865
No 3
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.94 E-value=2.9e-25 Score=206.54 Aligned_cols=190 Identities=16% Similarity=0.117 Sum_probs=136.4
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHH----------HHHHHHHHhCCCCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWPTS 153 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~~~ 153 (346)
+++||||+||||+|+....+..+|.+++.++|.+ ++.+.+....+. .... ....+...++.+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGL---GKWDHIRALLKMPAVAERWRAKFGRLP- 74 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCc---cHHHHHHHHhcCHHHHHHHHHHhCCCC-
Confidence 6899999999999986533468999999999986 444443333221 1111 1222344444321
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-hh
Q 019086 154 VPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI 232 (346)
Q Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f-~~ 232 (346)
..+ .+..+...+...+.+.+ .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+| +.
T Consensus 75 -~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~---~~~~~~~~~l~~~gl~~~f~d~ 145 (253)
T TIGR01422 75 -TEA----DIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTG---YTREMMDVVAPEAALQGYRPDY 145 (253)
T ss_pred -CHH----HHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHHHHhcCCCCce
Confidence 111 12334444444444444 33567999999999999999999999999 6788899999999999875 54
Q ss_pred eecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHH
Q 019086 233 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 312 (346)
Q Consensus 233 ~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~ 312 (346)
. ++.+++ . ..||+|++ |..++++
T Consensus 146 i-i~~~~~--------------~----------------------------~~KP~p~~--------------~~~a~~~ 168 (253)
T TIGR01422 146 N-VTTDDV--------------P----------------------------AGRPAPWM--------------ALKNAIE 168 (253)
T ss_pred E-EccccC--------------C----------------------------CCCCCHHH--------------HHHHHHH
Confidence 3 333222 1 12788888 9999999
Q ss_pred cCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 313 AEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 313 lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|+. |++|++|||+.+||.+|+++||.+|+|.++
T Consensus 169 l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 169 LGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred cCCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 9995 999999999999999999999999999764
No 4
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=1.3e-25 Score=208.88 Aligned_cols=192 Identities=17% Similarity=0.219 Sum_probs=137.4
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCC-CCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCCh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 157 (346)
+..+++++||||+||||+|+... +..+|.++++++|++. ..++.+.+...+ .+.....+...+ +.. .. +
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~--~G~~~~~~~~~~---~~~--~~--~ 86 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENI--AGKHNEDIALGL---FPD--DL--E 86 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHc--CCCCHHHHHHHH---cCc--ch--h
Confidence 34456899999999999999986 7899999999997531 013333322111 111222222221 111 11 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
. ...+...+...|.... ....+++||+.++|+.|+++|++++|+|| +....++..++++|+.++|+..+.+.
T Consensus 87 ~----~~~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~iv~~~ 158 (248)
T PLN02770 87 R----GLKFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDFFQAVIIGS 158 (248)
T ss_pred h----HHHHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhhCcEEEecC
Confidence 1 1123334444555544 34577999999999999999999999999 67899999999999999887643332
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
.+.. .||+|++ |..+++++|++|
T Consensus 159 ---------------~~~~----------------------------~KP~p~~--------------~~~a~~~~~~~~ 181 (248)
T PLN02770 159 ---------------ECEH----------------------------AKPHPDP--------------YLKALEVLKVSK 181 (248)
T ss_pred ---------------cCCC----------------------------CCCChHH--------------HHHHHHHhCCCh
Confidence 2211 2788877 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|++|||+..|+++|+++||.+|+|.+
T Consensus 182 ~~~l~vgDs~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 182 DHTFVFEDSVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred hHEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 9999999999999999999999999975
No 5
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=7e-25 Score=208.30 Aligned_cols=203 Identities=30% Similarity=0.524 Sum_probs=144.2
Q ss_pred CCceEEEEeccCcccccc-ccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCC----CCC--
Q 019086 82 PRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWP----TSV-- 154 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~-~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~----~~~-- 154 (346)
.++++|||||||||+|+. .. +..+|.++++++|++...++.+.+..+.. .++....+... +...+++ ...
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLN-IGGGKERMTWY-FNENGWPTSTIEKAPK 114 (286)
T ss_pred cCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHc-cCCChHHHHHH-HHHcCCCccccccCCc
Confidence 357999999999999999 76 78999999999999422355555544443 33333444333 3445554 111
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh-e
Q 019086 155 PTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-K 233 (346)
Q Consensus 155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~-~ 233 (346)
..+.....++.+...+...|...+....++++||+.++|+.|+++|++++|+|| +....+..+++.++...+++. .
T Consensus 115 ~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn---~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCST---SNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhccccccCceE
Confidence 122233344455555556666665333468999999999999999999999999 567778888887754444432 1
Q ss_pred ecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 234 i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
+++. +.+ ...||+|++ |..+++++
T Consensus 192 ~v~~--------------~~~----------------------------~~~KP~p~~--------------~~~a~~~~ 215 (286)
T PLN02779 192 VFAG--------------DDV----------------------------PKKKPDPDI--------------YNLAAETL 215 (286)
T ss_pred EEec--------------ccc----------------------------CCCCCCHHH--------------HHHHHHHh
Confidence 2222 111 122888888 99999999
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 314 gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
|++|++|+||||+.+||++|+++||.+|+|.++
T Consensus 216 ~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 216 GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 999999999999999999999999999999753
No 6
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=3.1e-25 Score=203.83 Aligned_cols=186 Identities=19% Similarity=0.250 Sum_probs=136.8
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++||||+||||+|+... +..+|+.+++++|.+ .++.+.+....+. ....+.... .+ . ....+ .
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~---~~~~~~~~~---~~-~--~~~~~----~ 75 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRA--PITLAQLRPVVSK---GARAMLAVA---FP-E--LDAAA----R 75 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhhh---HHHHHHHHH---hc-c--CChHH----H
Confidence 589999999999999987 889999999999987 3555555444432 122221111 11 1 11111 2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
+++.+.+...|.... ....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+.. ++.+
T Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn---~~~~~~~~~l~~~~l~~~f~~i-~~~~----- 145 (229)
T PRK13226 76 DALIPEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTN---KPEYLARLILPQLGWEQRCAVL-IGGD----- 145 (229)
T ss_pred HHHHHHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCchhcccEE-EecC-----
Confidence 334444555555444 23467999999999999999999999999 6678888899999998887753 2221
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
.+. ..||+|++ |..+++++|++|++|++|
T Consensus 146 ---------~~~----------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 146 ---------TLA----------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYV 174 (229)
T ss_pred ---------cCC----------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEe
Confidence 111 12788887 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecCC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
||+.+|+.+|+++||.+|+|.++
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g 197 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWG 197 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeec
Confidence 99999999999999999998753
No 7
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.93 E-value=4e-25 Score=200.41 Aligned_cols=184 Identities=10% Similarity=0.129 Sum_probs=135.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+++|+||+||||+|+... +..+|.+++++++.. ..+.+.+....+. ..... +..+. ...
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~--~~~~~~~~~~~G~---~~~~~----~~~~~------~~~--- 61 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPN--QYKREDVLPFIGP---SLHDT----FSKID------ESK--- 61 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCC--CCCHHHHHHHhCc---CHHHH----HHhcC------HHH---
Confidence 46889999999999999986 789999999998875 2444444444321 22222 22221 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+...+...+.... .....++||+.++|+.|+++|++++|+|| +....+..+++.+|+..+|+..+ +.
T Consensus 62 -~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~i~-~~---- 131 (214)
T PRK13288 62 -VEEMITTYREFNHEHH-DELVTEYETVYETLKTLKKQGYKLGIVTT---KMRDTVEMGLKLTGLDEFFDVVI-TL---- 131 (214)
T ss_pred -HHHHHHHHHHHHHHhh-hhhcccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhceeEEE-ec----
Confidence 2233333333333322 23467999999999999999999999999 66788999999999999887643 22
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
+.+. ..||+|++ |+.+++++|++|++|+
T Consensus 132 ----------~~~~----------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 132 ----------DDVE----------------------------HAKPDPEP--------------VLKALELLGAKPEEAL 159 (214)
T ss_pred ----------CcCC----------------------------CCCCCcHH--------------HHHHHHHcCCCHHHEE
Confidence 1111 12788777 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecCC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|||+.+|+++|+++|+.+|+|.++
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEEEcCC
Confidence 9999999999999999999998763
No 8
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=6.6e-25 Score=198.01 Aligned_cols=186 Identities=22% Similarity=0.272 Sum_probs=138.0
Q ss_pred EEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNV 166 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 166 (346)
||||+||||+|+... +..+++++++++|++ .++...+....+. ....+...+....+.+.. . ..++.+
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~--~----~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLP--PATLARVIGFIGN---GVPVLMERVLAWAGQEPD--A----QRVAEL 68 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhcc---cHHHHHHHHhhccccccC--h----HHHHHH
Confidence 699999999999886 678999999999987 3555554444322 222333344444433211 1 113344
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhh
Q 019086 167 LQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 246 (346)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~ 246 (346)
...+.+.|.+.. ....+++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.. ++.++
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~------- 136 (213)
T TIGR01449 69 RKLFDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTN---KPTPLARPLLELLGLAKYFSVL-IGGDS------- 136 (213)
T ss_pred HHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCcHhhCcEE-EecCC-------
Confidence 455555555544 33467999999999999999999999999 6678899999999999887753 22211
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 019086 247 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 326 (346)
Q Consensus 247 ~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs 326 (346)
+. ..||+|++ |..+++++|++|++|++|||+
T Consensus 137 -------~~----------------------------~~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs 167 (213)
T TIGR01449 137 -------LA----------------------------QRKPHPDP--------------LLLAAERLGVAPQQMVYVGDS 167 (213)
T ss_pred -------CC----------------------------CCCCChHH--------------HHHHHHHcCCChhHeEEeCCC
Confidence 11 12788777 999999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEecC
Q 019086 327 QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~ 345 (346)
.+|+.+|+++||.+|+|.+
T Consensus 168 ~~d~~aa~~aG~~~i~v~~ 186 (213)
T TIGR01449 168 RVDIQAARAAGCPSVLLTY 186 (213)
T ss_pred HHHHHHHHHCCCeEEEEcc
Confidence 9999999999999999975
No 9
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.93 E-value=1e-24 Score=199.02 Aligned_cols=189 Identities=19% Similarity=0.279 Sum_probs=137.7
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCCh-HHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
.+.+++|+||+||||+|+... +..++.++++++|++ .+. .......+ .....+...+....++... ..
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~----~~ 72 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVD---ISRREELPDTLG---LRIDQVVDLWYARQPWNGP----SR 72 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCC---CCHHHHHHHhhC---CCHHHHHHHHHHhcCCCCC----CH
Confidence 335899999999999999886 779999999999987 332 33333332 2233333344444444211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
+.+.....+.+.+.+ .....++||+.++|..|+++|++++|+|| +....++.+++.+|+..+|+..+.+. +
T Consensus 73 ----~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~~~~~-~ 143 (222)
T PRK10826 73 ----QEVVQRIIARVISLI-EETRPLLPGVREALALCKAQGLKIGLASA---SPLHMLEAVLTMFDLRDYFDALASAE-K 143 (222)
T ss_pred ----HHHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHhCcchhcccEEEEcc-c
Confidence 122222333333333 23467999999999999999999999999 66788999999999999887643222 1
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
+. ..||+|++ |+.+++++|++|++
T Consensus 144 --------------~~----------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~ 167 (222)
T PRK10826 144 --------------LP----------------------------YSKPHPEV--------------YLNCAAKLGVDPLT 167 (222)
T ss_pred --------------CC----------------------------CCCCCHHH--------------HHHHHHHcCCCHHH
Confidence 11 12777777 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++|||+.+|+++|+++||++|++.+
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~ 193 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPA 193 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecC
Confidence 99999999999999999999999875
No 10
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.93 E-value=6.7e-25 Score=193.58 Aligned_cols=184 Identities=23% Similarity=0.317 Sum_probs=134.6
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
+||||+||||+|+... +..+|.+++.++|++ ++......+.+ .........+..+.+.+. +.+. +..
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~--~~~~----~~~ 67 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKG---VSREDSLERILDLGGKKY--SEEE----KEE 67 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CChHHHHHHHHHhcCCCC--CHHH----HHH
Confidence 5899999999999987 789999999999987 55544443332 233445555666666532 2222 223
Q ss_pred HHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhh
Q 019086 166 VLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSL 244 (346)
Q Consensus 166 l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~ 244 (346)
+.+.+...|.+.+.. ....++||+.++|+.|+++|++++|+||. ......++.+|+..+|+..+.+. +.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~-----~~~~~~l~~~~l~~~f~~~~~~~-~~---- 137 (185)
T TIGR01990 68 LAERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASAS-----KNAPTVLEKLGLIDYFDAIVDPA-EI---- 137 (185)
T ss_pred HHHHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCC-----ccHHHHHHhcCcHhhCcEEEehh-hc----
Confidence 333344444443321 23468999999999999999999999983 23467899999999887743222 11
Q ss_pred hhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc
Q 019086 245 YGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA 324 (346)
Q Consensus 245 f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VG 324 (346)
...||+|++ |+.++++++++|++|++||
T Consensus 138 --------------------------------------~~~kp~p~~--------------~~~~~~~~~~~~~~~v~vg 165 (185)
T TIGR01990 138 --------------------------------------KKGKPDPEI--------------FLAAAEGLGVSPSECIGIE 165 (185)
T ss_pred --------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeEEEe
Confidence 122788887 9999999999999999999
Q ss_pred CChhhHHHHHHcCCCEEEec
Q 019086 325 GSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 325 Ds~~Di~aA~~aG~~~i~v~ 344 (346)
|+.+|+.+|+++||++|+|+
T Consensus 166 D~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 166 DAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred cCHHHHHHHHHcCCEEEecC
Confidence 99999999999999999874
No 11
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.93 E-value=1.3e-24 Score=191.79 Aligned_cols=185 Identities=22% Similarity=0.317 Sum_probs=135.8
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+++|+||+||||+|+... +..+|.++++++|++ ++......+.+ .........+...++.. ++.++ +
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g---~~~~~~~~~~~~~~~~~--~~~~~----~ 67 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLGG---LSREDILRAILKLRKPG--LSLET----I 67 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcCC---CCHHHHHHHHHHhcCCC--CCHHH----H
Confidence 479999999999999986 788999999999987 44333222221 12333444455544321 22122 3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
..+...+...|.+.+......++||+.++|+.|+++|++++++|| + ..++.+++.+|+.++|+..+ +.++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~---~--~~~~~~l~~~~l~~~f~~v~-~~~~~--- 138 (185)
T TIGR02009 68 HQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSS---S--KNADRILAKLGLTDYFDAIV-DADEV--- 138 (185)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeC---c--hhHHHHHHHcChHHHCCEee-ehhhC---
Confidence 344455555555554334578999999999999999999999999 4 56888999999999887643 22111
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
...||+|++ |+.+++++|++|++|++|
T Consensus 139 ---------------------------------------~~~kp~~~~--------------~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 139 ---------------------------------------KEGKPHPET--------------FLLAAELLGVSPNECVVF 165 (185)
T ss_pred ---------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeEEE
Confidence 123788777 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEe
Q 019086 324 AGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v 343 (346)
||+.+|+++|+++||++|.|
T Consensus 166 gD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 166 EDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred eCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999976
No 12
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.93 E-value=1.1e-24 Score=204.27 Aligned_cols=191 Identities=19% Similarity=0.249 Sum_probs=136.9
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChHHHHHHHHHHhCCCCCCCCh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~ 157 (346)
.....+|+|||||||||+|+....+..+|+++++++|++ ++.. .+....+ .....+...+ +++.. ..+
T Consensus 19 ~~~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~---~~~~e~~~~~~G---~~~~~~~~~l---~~~~~--~~~ 87 (260)
T PLN03243 19 RLGCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKR---PPPAFLLKRAEG---MKNEQAISEV---LCWSR--DFL 87 (260)
T ss_pred HhcCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCC---CCHHHHHHHhcC---CCHHHHHHHH---hccCC--CHH
Confidence 344578999999999999996432668999999999997 3332 2222222 2222232222 22211 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.+..+...+...+.. ......+++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+..+.+
T Consensus 88 ----~~~~l~~~~~~~~~~-~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~ii~~- 158 (260)
T PLN03243 88 ----QMKRLAIRKEDLYEY-MQGGLYRLRPGSREFVQALKKHEIPIAVAST---RPRRYLERAIEAVGMEGFFSVVLAA- 158 (260)
T ss_pred ----HHHHHHHHHHHHHHH-HHccCcccCCCHHHHHHHHHHCCCEEEEEeC---cCHHHHHHHHHHcCCHhhCcEEEec-
Confidence 123333444444432 2234567899999999999999999999999 6678899999999999988764333
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
+.+.. .||+|++ |..+++++|++|
T Consensus 159 --------------~d~~~----------------------------~KP~Pe~--------------~~~a~~~l~~~p 182 (260)
T PLN03243 159 --------------EDVYR----------------------------GKPDPEM--------------FMYAAERLGFIP 182 (260)
T ss_pred --------------ccCCC----------------------------CCCCHHH--------------HHHHHHHhCCCh
Confidence 22211 2888888 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|+||||+..|+.+|+++||.+|++.+
T Consensus 183 ~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 183 ERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred HHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 9999999999999999999999999863
No 13
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.92 E-value=2.8e-24 Score=201.76 Aligned_cols=192 Identities=17% Similarity=0.117 Sum_probs=134.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHH----------HHHHHHHHhCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR----------MLVLFFNRIGWP 151 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~g~~ 151 (346)
|++|+||||+||||+|+....+..+|++++.++|++ ++.+.+...++ ..... ....+...++.+
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~~g~~ 75 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVE---ITLEEARGPMG---LGKWDHIRALLKMPRVAARWQAVFGRL 75 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHhcHHHHHHHHHHhCCC
Confidence 357999999999999986432368999999999986 44433332222 11111 111223334432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch-
Q 019086 152 TSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS- 230 (346)
Q Consensus 152 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f- 230 (346)
. ..+ .+..+...+...+.+.. .....++||+.++|+.|+++|++++|+|| +....+..+++.+++..+|
T Consensus 76 ~--~~~----~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~---~~~~~~~~~l~~~~l~~~~~ 145 (267)
T PRK13478 76 P--TEA----DVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTG---YTREMMDVVVPLAAAQGYRP 145 (267)
T ss_pred C--CHH----HHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHHhhcCCCc
Confidence 1 111 12333444444444433 33467999999999999999999999999 6678888999999988764
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+. +++.++ +. ..||+|++ |..++
T Consensus 146 d~-i~~~~~--------------~~----------------------------~~KP~p~~--------------~~~a~ 168 (267)
T PRK13478 146 DH-VVTTDD--------------VP----------------------------AGRPYPWM--------------ALKNA 168 (267)
T ss_pred eE-EEcCCc--------------CC----------------------------CCCCChHH--------------HHHHH
Confidence 44 333322 11 12788887 99999
Q ss_pred HHcCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 311 EYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 311 e~lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+++|+. +++|+||||+.+|+.+|+++||.+|+|.++
T Consensus 169 ~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 169 IELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 999996 699999999999999999999999999764
No 14
>PRK11587 putative phosphatase; Provisional
Probab=99.92 E-value=3e-24 Score=195.63 Aligned_cols=183 Identities=17% Similarity=0.242 Sum_probs=126.2
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|++++||||+||||+|+... +..+|+++++++|++. ..+.... .+.......+.+.. . ...++
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~-----~~~~~~~--~g~~~~~~~~~~~~----~--~~~~~--- 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP-----DEVLNFI--HGKQAITSLRHFMA----G--ASEAE--- 63 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH-----HHHHHHH--cCCCHHHHHHHHhc----c--CCcHH---
Confidence 56899999999999999986 7899999999999872 1111111 11222222222211 1 11111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+.+.. ... ..+.... .....++||+.++|+.|+++|++++|+|| +........++.+|+. +|+. +++.++.
T Consensus 64 ~~~~~-~~~-~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn---~~~~~~~~~l~~~~l~-~~~~-i~~~~~~- 134 (218)
T PRK11587 64 IQAEF-TRL-EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTS---GSVPVASARHKAAGLP-APEV-FVTAERV- 134 (218)
T ss_pred HHHHH-HHH-HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcC---CCchHHHHHHHhcCCC-CccE-EEEHHHh-
Confidence 11111 111 1111222 24567999999999999999999999999 5556677778888884 3433 3333222
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
...||+|++ |..+++++|+.|++|+
T Consensus 135 -----------------------------------------~~~KP~p~~--------------~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 135 -----------------------------------------KRGKPEPDA--------------YLLGAQLLGLAPQECV 159 (218)
T ss_pred -----------------------------------------cCCCCCcHH--------------HHHHHHHcCCCcccEE
Confidence 123888888 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|||+..|+++|+++||.+|+|.+
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~~ 183 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVNA 183 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEECC
Confidence 999999999999999999999975
No 15
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.92 E-value=3.1e-24 Score=196.26 Aligned_cols=190 Identities=21% Similarity=0.267 Sum_probs=137.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
|.+++|+||+||||+|+... +..+++.+++++|.+. .+........+. ....+.. ...+.... +....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~---~~~~~~~---~~~~~~~~---~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGL---GLDELIE---RLLGEADE---EAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcC---CHHHHHH---HHhccccc---hhHHH
Confidence 56889999999999999986 7899999999999983 454554444432 2222222 11221111 11002
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.++.+...+.+.+.+.. ...++||+.++|+.|+++|++++|+|| ..+..++.+++.+|+..+|+..+- .++
T Consensus 70 ~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i~g-~~~-- 140 (220)
T COG0546 70 LVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVIVG-GDD-- 140 (220)
T ss_pred HHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceEEc-CCC--
Confidence 23333333333333322 246999999999999999999999999 778999999999999999887532 111
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
. ...||+|.. +..+++.+|++|++++
T Consensus 141 ------------~----------------------------~~~KP~P~~--------------l~~~~~~~~~~~~~~l 166 (220)
T COG0546 141 ------------V----------------------------PPPKPDPEP--------------LLLLLEKLGLDPEEAL 166 (220)
T ss_pred ------------C----------------------------CCCCcCHHH--------------HHHHHHHhCCChhheE
Confidence 1 112677776 9999999999988999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecCC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
||||+.+||.||++||+.+|.|+++
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECC
Confidence 9999999999999999999999874
No 16
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.92 E-value=1.7e-24 Score=211.42 Aligned_cols=188 Identities=16% Similarity=0.232 Sum_probs=139.6
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
..++|||||||||+|+....+..+|.++++++|++. ...+.+....+ .....++..+.. +. .... .
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G---~~~~~~l~~ll~---~~--~~~~----~ 195 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEG---MKNEQAISEVLC---WS--RDPA----E 195 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcC---CCHHHHHHHHhh---cc--CCHH----H
Confidence 678999999999999886326679999999999972 22223333332 223333333222 11 1111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
++.+...+.+.|.+.. .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+..+.+
T Consensus 196 ~e~l~~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~s------ 265 (381)
T PLN02575 196 LRRMATRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVAA------ 265 (381)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEec------
Confidence 3455555666665555 34567999999999999999999999999 6789999999999999988764322
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
+.+.. .||+|++ |..+++++|+.|++|++
T Consensus 266 ---------ddv~~----------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~ 294 (381)
T PLN02575 266 ---------EDVYR----------------------------GKPDPEM--------------FIYAAQLLNFIPERCIV 294 (381)
T ss_pred ---------CcCCC----------------------------CCCCHHH--------------HHHHHHHcCCCcccEEE
Confidence 22211 2888888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+..||++|+++||.+|+|.+
T Consensus 295 IGDS~~DIeAAk~AGm~~IgV~~ 317 (381)
T PLN02575 295 FGNSNQTVEAAHDARMKCVAVAS 317 (381)
T ss_pred EcCCHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999999975
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=3.2e-24 Score=190.03 Aligned_cols=184 Identities=20% Similarity=0.262 Sum_probs=134.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
++++|+||+||||+|+... +..+|.+++.++|.+ ++........ +.....+...+....+.+. .
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~--~------- 67 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALN---GSPTWRIAQAIIELNQADL--D------- 67 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhc---CCCHHHHHHHHHHHhCCCC--C-------
Confidence 4789999999999999886 789999999999986 4433322222 2223334445555544321 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
.+.+...+...+.... .....++|+ .++|..|+++ ++++|+|| +....++..++.+|+..+|+.. ++.++.
T Consensus 68 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i-~~~~~~-- 138 (188)
T PRK10725 68 PHALAREKTEAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAV-VAADDV-- 138 (188)
T ss_pred HHHHHHHHHHHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEE-Eehhhc--
Confidence 1122233333444443 234567886 5899999876 89999999 6788999999999999988864 333222
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
...||+|++ |+.+++++|++|++||+
T Consensus 139 ----------------------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 139 ----------------------------------------QHHKPAPDT--------------FLRCAQLMGVQPTQCVV 164 (188)
T ss_pred ----------------------------------------cCCCCChHH--------------HHHHHHHcCCCHHHeEE
Confidence 123888888 99999999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEecC
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|||+.+|+++|+++|+++|.|+.
T Consensus 165 igDs~~di~aA~~aG~~~i~~~~ 187 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVDVRL 187 (188)
T ss_pred EeccHhhHHHHHHCCCEEEeecC
Confidence 99999999999999999999863
No 18
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.92 E-value=4.8e-24 Score=194.12 Aligned_cols=184 Identities=15% Similarity=0.245 Sum_probs=135.1
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCCh-HHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-PIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
++++|+||+||||+|+... +..+|.+++.++|++ .+. +.+..+.+. ....+...+...++.+...
T Consensus 3 ~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~------- 68 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGIT---LSLEEVFKRFKGV---KLYEIIDIISKEHGVTLAK------- 68 (221)
T ss_pred CCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhcCC---CHHHHHHHHHHHhCCCCCH-------
Confidence 5889999999999999886 679999999999986 332 233332221 2334555566666654221
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
+.+...+...+.... ....+++||+.++|+.| +++++|+|| +....+...++++|+..+|+..+++.++.
T Consensus 69 --~~~~~~~~~~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn---~~~~~~~~~l~~~~l~~~F~~~v~~~~~~- 138 (221)
T PRK10563 69 --AELEPVYRAEVARLF-DSELEPIAGANALLESI---TVPMCVVSN---GPVSKMQHSLGKTGMLHYFPDKLFSGYDI- 138 (221)
T ss_pred --HHHHHHHHHHHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeC---CcHHHHHHHHHhcChHHhCcceEeeHHhc-
Confidence 122222232222222 23477999999999999 499999999 66788999999999999986444444322
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
...||+|++ |..+++++|++|++|+
T Consensus 139 -----------------------------------------~~~KP~p~~--------------~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 139 -----------------------------------------QRWKPDPAL--------------MFHAAEAMNVNVENCI 163 (221)
T ss_pred -----------------------------------------CCCCCChHH--------------HHHHHHHcCCCHHHeE
Confidence 122888888 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEEecC
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||||+..||++|+++||++|+++.
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~~~ 187 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYFCA 187 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEECC
Confidence 999999999999999999998853
No 19
>PLN02940 riboflavin kinase
Probab=99.91 E-value=1.2e-23 Score=207.41 Aligned_cols=186 Identities=19% Similarity=0.291 Sum_probs=141.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+++||||+||||+|+... +..+|.++++++|++ ++...+....+ .....+...++.+++.+..
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~-------- 73 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVG---KTPLEAAATVVEDYGLPCS-------- 73 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcC---CCHHHHHHHHHHHhCCCCC--------
Confidence 34889999999999999986 789999999999987 55555444333 2334455566676665422
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHH-HhCcccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~-~lgl~~~f~~~i~~~~e~ 240 (346)
.+.+.....+.+.+.. ....++||+.++|+.|+++|++++|+|| +....+...++ .+|+.++|+..+ +.++
T Consensus 74 -~~~~~~~~~~~~~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn---~~~~~~~~~l~~~~gl~~~Fd~ii-~~d~- 145 (382)
T PLN02940 74 -TDEFNSEITPLLSEQW--CNIKALPGANRLIKHLKSHGVPMALASN---SPRANIEAKISCHQGWKESFSVIV-GGDE- 145 (382)
T ss_pred -HHHHHHHHHHHHHHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhccChHhhCCEEE-ehhh-
Confidence 1133333344443333 2366899999999999999999999999 66777777876 789988887643 3222
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
+ ...||+|++ |..+++++|++|++|
T Consensus 146 -------------v----------------------------~~~KP~p~~--------------~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 146 -------------V----------------------------EKGKPSPDI--------------FLEAAKRLNVEPSNC 170 (382)
T ss_pred -------------c----------------------------CCCCCCHHH--------------HHHHHHHcCCChhHE
Confidence 1 123888888 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+..|+++|+++||.+|+|++
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999976
No 20
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=3.4e-23 Score=188.33 Aligned_cols=193 Identities=19% Similarity=0.206 Sum_probs=140.8
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.+++++|+||+||||+|+... +..+|.++++++|.+ .++...+..+.+. ....+....+...+.. ++.++
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~--~~~~~-- 72 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLP--PAGEERVRTWVGN---GADVLVERALTWAGRE--PDEEL-- 72 (226)
T ss_pred CCcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHHHHHHHHHhhccCC--ccHHH--
Confidence 356889999999999999875 678999999999987 3454444443321 2333333333332211 22222
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
++.+...+...|.... .....++||+.++|+.|+++|++++|+|| +.....+.+++++|+..+|+.. ++.
T Consensus 73 --~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~--- 142 (226)
T PRK13222 73 --LEKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTN---KPTPFVAPLLEALGIADYFSVV-IGG--- 142 (226)
T ss_pred --HHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCccCccEE-EcC---
Confidence 3344445555555544 23467999999999999999999999999 6678889999999998877653 222
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
+.+. ..||+|++ |+.+++++++++++|
T Consensus 143 -----------~~~~----------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 143 -----------DSLP----------------------------NKKPDPAP--------------LLLACEKLGLDPEEM 169 (226)
T ss_pred -----------CCCC----------------------------CCCcChHH--------------HHHHHHHcCCChhhe
Confidence 1111 12777777 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
++|||+.+|+++|+++|+++|+|.++
T Consensus 170 i~igD~~~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred EEECCCHHHHHHHHHCCCcEEEECcC
Confidence 99999999999999999999998753
No 21
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.91 E-value=1.9e-23 Score=187.65 Aligned_cols=183 Identities=17% Similarity=0.240 Sum_probs=124.5
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHH-HHHhh-------------ccCCh-H----HHHHHHH
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-DLLRK-------------SAGDE-D----RMLVLFF 145 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~-~~~~~-------------~~g~~-~----~~~~~~~ 145 (346)
|+|+||+||||+|+... +..++.++++++|++ ++..... .+... ..|.. . .+....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVE---VSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999875 778999999999997 3332221 11110 00211 1 1122223
Q ss_pred HHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC
Q 019086 146 NRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (346)
Q Consensus 146 ~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg 225 (346)
...+.+. .+ .+.......+..+.......++||+.++|+.|+++|++++|+||. ... ....++.+|
T Consensus 77 ~~~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---~~~-~~~~l~~~~ 142 (203)
T TIGR02252 77 GRAGVPD---PE-------SFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNF---DSR-LRGLLEALG 142 (203)
T ss_pred HhcCCCC---ch-------hHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCC---chh-HHHHHHHCC
Confidence 3333211 01 112222222222221234578999999999999999999999994 333 577889999
Q ss_pred cccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHH
Q 019086 226 SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAA 305 (346)
Q Consensus 226 l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~ 305 (346)
+..+|+..+.+.+ + ...||+|++
T Consensus 143 l~~~fd~i~~s~~---------------~----------------------------~~~KP~~~~-------------- 165 (203)
T TIGR02252 143 LLEYFDFVVTSYE---------------V----------------------------GAEKPDPKI-------------- 165 (203)
T ss_pred cHHhcceEEeecc---------------c----------------------------CCCCCCHHH--------------
Confidence 9988876543321 1 122888887
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~ 342 (346)
|+.+++++|++|++|++|||+. +||.+|+++||.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 9999999999999999999997 899999999999985
No 22
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.91 E-value=1.8e-23 Score=189.80 Aligned_cols=187 Identities=18% Similarity=0.159 Sum_probs=123.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHH---HHHcCCCCCCCChHHHHHHHhh----ccCChHHHHHHHHHHhCCCCCCCC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAPIYTDLLRK----SAGDEDRMLVLFFNRIGWPTSVPT 156 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~---~~~~gi~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~g~~~~~~~ 156 (346)
+++|+||+||||+|+... +..++..+ +.++|++ ++.+.+...+.. .+.............++... .
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 74 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLN---VDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEY--N- 74 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCc---CCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhc--C-
Confidence 689999999999999876 55666544 4566776 333322221111 00000000111111111100 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 157 NEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
.+.+ ......+.... ....+++||+.++|++|+++|++++|+|| +....+...++.+|+..+|+..+.+
T Consensus 75 ------~~~~-~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~f~~i~~~ 143 (221)
T TIGR02253 75 ------PKLV-AAFVYAYHKLK-FAYLRVYPGVRDTLMELRESGYRLGIITD---GLPVKQWEKLERLGVRDFFDAVITS 143 (221)
T ss_pred ------HHHH-HHHHHHHHHHH-HHhCCCCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHhCChHHhccEEEEe
Confidence 0011 11111121211 22357999999999999999999999999 6667788999999999988765433
Q ss_pred hhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 019086 237 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (346)
Q Consensus 237 ~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~ 316 (346)
. .+. ..||+|++ |+.+++++|++
T Consensus 144 ~---------------~~~----------------------------~~KP~~~~--------------~~~~~~~~~~~ 166 (221)
T TIGR02253 144 E---------------EEG----------------------------VEKPHPKI--------------FYAALKRLGVK 166 (221)
T ss_pred c---------------cCC----------------------------CCCCCHHH--------------HHHHHHHcCCC
Confidence 2 111 12788887 99999999999
Q ss_pred CCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 317 p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
+++|++|||+. +|+.+|+++||.+|++.+
T Consensus 167 ~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 167 PEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred hhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 99999999998 899999999999999875
No 23
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.90 E-value=4.5e-23 Score=185.74 Aligned_cols=176 Identities=23% Similarity=0.381 Sum_probs=128.0
Q ss_pred EEEeccCccccccccccHHHHHHHHHH-cCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~~~~~-~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
||||+||||+|+... +..++++++.+ +|.+ .++.+.+....+. ....+ .+.++.+. .. .+.
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~---~~~~~----~~~~~~~~----~~----~~~ 62 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDG--PAPFEEYRRHLGR---YFPDI----MRIMGLPL----EM----EEP 62 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCC--CCCHHHHHHHhCc---cHHHH----HHHcCCCH----HH----HHH
Confidence 689999999999987 78999999988 4775 2444444444332 12222 23344321 00 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
. ....+ . . ....+++||+.++|++|+++|++++|+|| +....++.+++.+|+..+|+..+ +.++
T Consensus 63 ~---~~~~~-~-~-~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~~l~~~f~~i~-~~~~------ 126 (205)
T TIGR01454 63 F---VRESY-R-L-AGEVEVFPGVPELLAELRADGVGTAIATG---KSGPRARSLLEALGLLPLFDHVI-GSDE------ 126 (205)
T ss_pred H---HHHHH-H-h-hcccccCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHcCChhheeeEE-ecCc------
Confidence 1 11111 1 1 23577999999999999999999999999 66788999999999998887643 2211
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
+ ...||+|++ |+.+++++|+++++|+||||
T Consensus 127 --------~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD 156 (205)
T TIGR01454 127 --------V----------------------------PRPKPAPDI--------------VREALRLLDVPPEDAVMVGD 156 (205)
T ss_pred --------C----------------------------CCCCCChHH--------------HHHHHHHcCCChhheEEEcC
Confidence 1 112777777 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEecCC
Q 019086 326 SQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 326 s~~Di~aA~~aG~~~i~v~~~ 346 (346)
+.+|+.+|+++||++|++.++
T Consensus 157 ~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 157 AVTDLASARAAGTATVAALWG 177 (205)
T ss_pred CHHHHHHHHHcCCeEEEEEec
Confidence 999999999999999998764
No 24
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=4.6e-23 Score=194.59 Aligned_cols=185 Identities=17% Similarity=0.231 Sum_probs=135.8
Q ss_pred CCCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChh
Q 019086 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNE 158 (346)
Q Consensus 79 ~~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~ 158 (346)
..+.++++|+|||||||+|+... +..+|+++++++|++ .++.+.+..+.+. ... .+...++.+ ..+
T Consensus 57 ~~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~--~~~~~~~~~~~g~---~~~----~i~~~~~~~----~~~ 122 (273)
T PRK13225 57 SYPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYD--PIDERDYAQLRQW---SSR----TIVRRAGLS----PWQ 122 (273)
T ss_pred hhhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCC--CCCHHHHHHHhCc---cHH----HHHHHcCCC----HHH
Confidence 34456899999999999999986 778999999999987 3555555555432 122 223334432 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh
Q 019086 159 KKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 238 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~ 238 (346)
.+++.+.+...+.... ...+++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+..+ +.+
T Consensus 123 ----~~~~~~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn---~~~~~~~~~L~~~gl~~~F~~vi-~~~ 192 (273)
T PRK13225 123 ----QARLLQRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSS---NSRQNIEAFLQRQGLRSLFSVVQ-AGT 192 (273)
T ss_pred ----HHHHHHHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhheEEEE-ecC
Confidence 2233333444443332 3467899999999999999999999999 67899999999999999887642 221
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+. ++.+. +|..++++++++|+
T Consensus 193 ~~---------------------------------------------~~k~~--------------~~~~~l~~~~~~p~ 213 (273)
T PRK13225 193 PI---------------------------------------------LSKRR--------------ALSQLVAREGWQPA 213 (273)
T ss_pred CC---------------------------------------------CCCHH--------------HHHHHHHHhCcChh
Confidence 10 11112 28999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
+|++|||+.+|+.+|+++||.+|+|.++
T Consensus 214 ~~l~IGDs~~Di~aA~~AG~~~I~v~~g 241 (273)
T PRK13225 214 AVMYVGDETRDVEAARQVGLIAVAVTWG 241 (273)
T ss_pred HEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 9999999999999999999999998763
No 25
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=9.4e-23 Score=192.35 Aligned_cols=190 Identities=17% Similarity=0.195 Sum_probs=134.0
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|||||||||+|+... +..++..+++++|.+. .+.+.+..+.+. ....+...+.........++. ...
T Consensus 13 ~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~---~~~~~~~~~l~~~~~~~~~~~----~~~ 82 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGN---GAPVLVRRALAGSIDHDGVDD----ELA 82 (272)
T ss_pred CCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhCh---hHHHHHHHHhcccccccCCCH----HHH
Confidence 579999999999999987 7899999999999872 333333333321 222222222211100111111 123
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
+.+...+.+.|.... ....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.. ++.
T Consensus 83 ~~~~~~~~~~~~~~~--~~~~~~~g~~e~L~~Lk~~g~~l~ivTn---~~~~~~~~~l~~~~i~~~f~~i-~~~------ 150 (272)
T PRK13223 83 EQALALFMEAYADSH--ELTVVYPGVRDTLKWLKKQGVEMALITN---KPERFVAPLLDQMKIGRYFRWI-IGG------ 150 (272)
T ss_pred HHHHHHHHHHHHhcC--cCCccCCCHHHHHHHHHHCCCeEEEEEC---CcHHHHHHHHHHcCcHhhCeEE-Eec------
Confidence 334444444443321 2356899999999999999999999999 6678888999999998877653 222
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+.+. ..||+|++ |+.+++++|+++++|++|
T Consensus 151 --------d~~~----------------------------~~Kp~p~~--------------~~~~~~~~g~~~~~~l~I 180 (272)
T PRK13223 151 --------DTLP----------------------------QKKPDPAA--------------LLFVMKMAGVPPSQSLFV 180 (272)
T ss_pred --------CCCC----------------------------CCCCCcHH--------------HHHHHHHhCCChhHEEEE
Confidence 2111 12777777 999999999999999999
Q ss_pred cCChhhHHHHHHcCCCEEEecC
Q 019086 324 AGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 324 GDs~~Di~aA~~aG~~~i~v~~ 345 (346)
||+.+||++|+++||.+++|.+
T Consensus 181 GD~~~Di~aA~~aGi~~i~v~~ 202 (272)
T PRK13223 181 GDSRSDVLAAKAAGVQCVALSY 202 (272)
T ss_pred CCCHHHHHHHHHCCCeEEEEec
Confidence 9999999999999999999875
No 26
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.90 E-value=2.2e-23 Score=186.63 Aligned_cols=103 Identities=17% Similarity=0.266 Sum_probs=89.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+..+.+. ++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~gl~~~fd~i~~s~-~~---------------------- 144 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSN---GSPAMLKSLVKHAGLDDPFDAVLSAD-AV---------------------- 144 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHCCChhhhheeEehh-hc----------------------
Confidence 56899999999999999999999999 66788999999999998887643332 21
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
...||+|++ |+.+++++|++|++|++|||+..|+.+|+++||++|+
T Consensus 145 --------------------~~~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~ 190 (198)
T TIGR01428 145 --------------------RAYKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAW 190 (198)
T ss_pred --------------------CCCCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEE
Confidence 122888888 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
|..
T Consensus 191 v~r 193 (198)
T TIGR01428 191 VNR 193 (198)
T ss_pred ecC
Confidence 864
No 27
>PRK09449 dUMP phosphatase; Provisional
Probab=99.90 E-value=6.6e-23 Score=186.87 Aligned_cols=186 Identities=13% Similarity=0.214 Sum_probs=123.9
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH-
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK- 160 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~- 160 (346)
|.+|+|+||+||||+|... ..++.++++.+|++ ++...+..+... + . .+...+ .... +...+..
T Consensus 1 m~~k~iiFDlDGTLid~~~---~~~~~~~~~~~g~~---~~~~~~~~~~~~--~-~-~~~~~~-~~~~----~~~~~~~~ 65 (224)
T PRK09449 1 MKYDWILFDADETLFHFDA---FAGLQRMFSRYGVD---FTAEDFQDYQAV--N-K-PLWVDY-QNGA----ITALQLQH 65 (224)
T ss_pred CCccEEEEcCCCchhcchh---hHHHHHHHHHhCCC---CcHHHHHHHHHH--H-H-HHHHHH-HcCC----CCHHHHHH
Confidence 4689999999999998543 47888999999986 344433332111 0 0 111011 0000 0000000
Q ss_pred HHHHHHH-------HHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhe
Q 019086 161 AFVKNVL-------QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 233 (346)
Q Consensus 161 ~~~~~l~-------~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~ 233 (346)
...+.+. ......|.+.. ....+++||+.++|+.|+ +|++++|+|| +....++..++.+|+..+|+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v 140 (224)
T PRK09449 66 TRFESWAEKLNVTPGELNSAFLNAM-AEICTPLPGAVELLNALR-GKVKMGIITN---GFTELQQVRLERTGLRDYFDLL 140 (224)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH-hhcCccCccHHHHHHHHH-hCCeEEEEeC---CcHHHHHHHHHhCChHHHcCEE
Confidence 0000000 11223333333 223669999999999999 6899999999 6678888999999999988775
Q ss_pred ecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 234 IVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 234 i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
+.+.+ + ...||+|++ |+.+++++
T Consensus 141 ~~~~~---------------~----------------------------~~~KP~p~~--------------~~~~~~~~ 163 (224)
T PRK09449 141 VISEQ---------------V----------------------------GVAKPDVAI--------------FDYALEQM 163 (224)
T ss_pred EEECc---------------c----------------------------CCCCCCHHH--------------HHHHHHHc
Confidence 43331 1 112888888 99999999
Q ss_pred CCC-CCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 314 EKP-VRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 314 gv~-p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
|+. +++|+||||+. +||.+|+++||.+|++.
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 985 58999999998 79999999999999986
No 28
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.90 E-value=1.1e-22 Score=184.64 Aligned_cols=183 Identities=15% Similarity=0.237 Sum_probs=127.9
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc--------cCC--hHHH----HHHHHHHhC
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS--------AGD--EDRM----LVLFFNRIG 149 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~--------~g~--~~~~----~~~~~~~~g 149 (346)
+|+|+||+||||+|+... +..++.++++++|++ .+........... .+. .... ...+..+++
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIP---LTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCC---ccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 479999999999999986 667889999999986 3322222211110 000 0000 011122222
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 150 WPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 150 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
.+. . .+...+.|.... ....+++||+.++|+.|+++ ++++|+|| +....++..++.+|+..+
T Consensus 77 ~~~--~-----------~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn---~~~~~~~~~l~~~~l~~~ 138 (224)
T TIGR02254 77 TEA--D-----------EALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTN---GVRETQYKRLRKSGLFPF 138 (224)
T ss_pred CCC--c-----------HHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeC---CchHHHHHHHHHCCcHhh
Confidence 110 0 001223333333 22357999999999999999 99999999 667888999999999998
Q ss_pred hhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHH
Q 019086 230 SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAG 309 (346)
Q Consensus 230 f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~ 309 (346)
|+..+.+.+. ...||+|++ |+.+
T Consensus 139 fd~i~~~~~~-------------------------------------------~~~KP~~~~--------------~~~~ 161 (224)
T TIGR02254 139 FDDIFVSEDA-------------------------------------------GIQKPDKEI--------------FNYA 161 (224)
T ss_pred cCEEEEcCcc-------------------------------------------CCCCCCHHH--------------HHHH
Confidence 8875433321 123888888 9999
Q ss_pred HHHc-CCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 310 AEYA-EKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~l-gv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
++++ |++|++|+||||+. +|+.+|+++||++|++.+
T Consensus 162 ~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 162 LERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred HHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 9999 99999999999998 799999999999999865
No 29
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=7.3e-23 Score=176.65 Aligned_cols=175 Identities=22% Similarity=0.370 Sum_probs=126.2
Q ss_pred EEEeccCccccccccccHHHHHH-HHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 87 viFDlDGTL~d~~~~~~~~a~~~-~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
|+||+||||+++... +.+++.+ +++.++.+ ++.+.+.... ......+...+..+.+..
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELF---GKSYEEALERLLERFGID-------------- 59 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHT---TSHHHHHHHHHHHHHHHH--------------
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHh---CCCHHHHHHHhhhccchh--------------
Confidence 799999999998874 6677776 47778776 2222222222 112333333344333211
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
.....+.+.+.......+++||+.++|+.|+++|++++++|| +....++..++.+|+.++|+..+.+. +.
T Consensus 60 -~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~i~~~~-~~----- 129 (176)
T PF13419_consen 60 -PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDEIISSD-DV----- 129 (176)
T ss_dssp -HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSEEEEGG-GS-----
T ss_pred -HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeec---CCcccccccccccccccccccccccc-hh-----
Confidence 122233333332224577999999999999999999999999 77888999999999999888654333 11
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
...||+|.+ |+.+++++|++|++|+||||
T Consensus 130 -------------------------------------~~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD 158 (176)
T PF13419_consen 130 -------------------------------------GSRKPDPDA--------------YRRALEKLGIPPEEILFVGD 158 (176)
T ss_dssp -------------------------------------SSSTTSHHH--------------HHHHHHHHTSSGGGEEEEES
T ss_pred -------------------------------------hhhhhHHHH--------------HHHHHHHcCCCcceEEEEeC
Confidence 112777777 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEe
Q 019086 326 SQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 326 s~~Di~aA~~aG~~~i~v 343 (346)
+..|+.+|+++||.+|+|
T Consensus 159 ~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 159 SPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp SHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHcCCeEEeC
Confidence 999999999999999986
No 30
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.89 E-value=1.3e-22 Score=186.22 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=89.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
....++||+.++|+.|+++|++++|+|| +....++..++.+|+.++|+..+.+. + +.
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~iv~s~-~--------------~~----- 146 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTN---AHPHNLAVKLEHTGLDAHLDLLLSTH-T--------------FG----- 146 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeC---cCHHHHHHHHHHCCcHHHCCEEEEee-e--------------CC-----
Confidence 3467999999999999999999999999 66788899999999999887654332 1 11
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
..||+|++ |+.+++++|++|++|+||||+..|+++|+++||.+
T Consensus 147 -----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 147 -----------------------YPKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred -----------------------CCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 12888888 99999999999999999999999999999999985
Q ss_pred -EEecC
Q 019086 341 -VVMRS 345 (346)
Q Consensus 341 -i~v~~ 345 (346)
+.|++
T Consensus 190 ~~~v~~ 195 (224)
T PRK14988 190 CLGVTN 195 (224)
T ss_pred EEEEeC
Confidence 65654
No 31
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.88 E-value=2e-21 Score=212.45 Aligned_cols=190 Identities=20% Similarity=0.261 Sum_probs=138.9
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
-+++++|+|||||||+|+... +..+|.++++++|++ ++.+.+....+ .....++..+...++.+.. .. .
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G---~~~~~~~~~~~~~~~l~~~-~~---~ 140 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMG---TGEANFLGGVASVKGVKGF-DP---D 140 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhC---CCHHHHHHHHHHhcCCCCC-CH---H
Confidence 357899999999999999987 789999999999997 55555544443 2334444444444444311 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc-cchhheecchh
Q 019086 161 AFVKNVLQEKKNALDEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNE 238 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~ 238 (346)
...+.+.+.|.+.... ....++||+.++|++|+++|++++|+|| +....++..++++|+. .+|+..+.+
T Consensus 141 ----~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~Fd~iv~~-- 211 (1057)
T PLN02919 141 ----AAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSMFDAIVSA-- 211 (1057)
T ss_pred ----HHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhHCCEEEEC--
Confidence 1122222233222211 2234799999999999999999999999 6678889999999996 667654322
Q ss_pred hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 239 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 239 e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
+.+. ..||+|++ |+.+++++|+.|+
T Consensus 212 -------------~~~~----------------------------~~KP~Pe~--------------~~~a~~~lgv~p~ 236 (1057)
T PLN02919 212 -------------DAFE----------------------------NLKPAPDI--------------FLAAAKILGVPTS 236 (1057)
T ss_pred -------------cccc----------------------------cCCCCHHH--------------HHHHHHHcCcCcc
Confidence 2221 22888888 9999999999999
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 319 NCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 319 e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|||+..|+++|+++||++|+|.+
T Consensus 237 e~v~IgDs~~Di~AA~~aGm~~I~v~~ 263 (1057)
T PLN02919 237 ECVVIEDALAGVQAARAAGMRCIAVTT 263 (1057)
T ss_pred cEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999976
No 32
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.87 E-value=1.1e-21 Score=197.92 Aligned_cols=185 Identities=11% Similarity=0.128 Sum_probs=128.7
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCC--CCC-ChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC--ANW-TAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~--~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
+++|||||||||+|+... +..+|++++++++... ..+ +.+.+....+ .....+...+....+.+
T Consensus 241 ~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G---~~~~~~~~~l~~~~~~~--------- 307 (459)
T PRK06698 241 LQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMG---VPLPKVWEALLPDHSLE--------- 307 (459)
T ss_pred hhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcC---CChHHHHHHHhhhcchh---------
Confidence 689999999999999997 7899999999985210 011 2233333332 22333333333322211
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
..+.....+.+.+...+.....+++||+.++|++|+++|++++|+|| +....++.+++++|+..+|+..+ +.+++
T Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i~-~~d~v 382 (459)
T PRK06698 308 -IREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTETF-SIEQI 382 (459)
T ss_pred -HHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhcceeE-ecCCC
Confidence 11222233333443333334567999999999999999999999999 77899999999999999887743 32221
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
. .||.|++ |..++++++ |++|
T Consensus 383 ~-------------------------------------------~~~kP~~--------------~~~al~~l~--~~~~ 403 (459)
T PRK06698 383 N-------------------------------------------SLNKSDL--------------VKSILNKYD--IKEA 403 (459)
T ss_pred C-------------------------------------------CCCCcHH--------------HHHHHHhcC--cceE
Confidence 0 0344455 888888865 6899
Q ss_pred EEEcCChhhHHHHHHcCCCEEEecC
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
++|||+.+|+.+|+++||.+|++.+
T Consensus 404 v~VGDs~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 404 AVVGDRLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred EEEeCCHHHHHHHHHCCCeEEEEeC
Confidence 9999999999999999999999875
No 33
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.87 E-value=1.3e-21 Score=179.10 Aligned_cols=193 Identities=15% Similarity=0.197 Sum_probs=136.7
Q ss_pred CCCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHh--------------hccC--ChHHHHH-
Q 019086 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR--------------KSAG--DEDRMLV- 142 (346)
Q Consensus 80 ~~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~--------------~~~g--~~~~~~~- 142 (346)
..+++|+|+||++|||+..... ....|.++.+++|+++. .......+. ...| ....++.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~ 78 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYD---DSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPK 78 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCC---HHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHH
Confidence 4578899999999999985543 56899999999999842 222222221 1112 2333433
Q ss_pred HHHHHhCCCCCCCChhHHHHHHHHHHH-HHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHH
Q 019086 143 LFFNRIGWPTSVPTNEKKAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVV 221 (346)
Q Consensus 143 ~~~~~~g~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l 221 (346)
.+...++.... .. .+...+. ....|..+. ...+...+++.++++.||++|..++++||+ +...+.++
T Consensus 79 lv~~~f~~~~~-~~------~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~----d~r~~~~l 146 (237)
T KOG3085|consen 79 LVESTFGKAGI-DY------EEELLENFSFRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNF----DDRLRLLL 146 (237)
T ss_pred HHHHHhccccc-hh------HHHHHhhhhhheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCC----cHHHHHHh
Confidence 22222222111 00 0011110 111222221 236778899999999999999999999995 45566999
Q ss_pred HHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHH
Q 019086 222 EKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDK 301 (346)
Q Consensus 222 ~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~ 301 (346)
..+|+..+||+.+.|++.+.+ ||+|.|
T Consensus 147 ~~~~l~~~fD~vv~S~e~g~~-------------------------------------------KPDp~I---------- 173 (237)
T KOG3085|consen 147 LPLGLSAYFDFVVESCEVGLE-------------------------------------------KPDPRI---------- 173 (237)
T ss_pred hccCHHHhhhhhhhhhhhccC-------------------------------------------CCChHH----------
Confidence 999999999999988866544 999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 302 IVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 302 ~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+++++|+.|++|+||||.. ||+++|+++||.+++|-+
T Consensus 174 ----f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 174 ----FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred ----HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 9999999999999999999997 899999999999999865
No 34
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=1.4e-21 Score=176.73 Aligned_cols=105 Identities=13% Similarity=0.124 Sum_probs=83.2
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhH--HHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRI--ARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~--~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...+++||+.++|+.|+++|++++|+||. .... ....+..+++..+|+..+.+.+.
T Consensus 91 ~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~---~~~~~~~~~~~~~~~l~~~fd~v~~s~~~------------------- 148 (211)
T TIGR02247 91 ENTKLRPSMMAAIKTLRAKGFKTACITNN---FPTDHSAEEALLPGDIMALFDAVVESCLE------------------- 148 (211)
T ss_pred cccccChhHHHHHHHHHHCCCeEEEEeCC---CCccchhhhHhhhhhhHhhCCEEEEeeec-------------------
Confidence 35678999999999999999999999994 3222 22233446777777765433211
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
+..||+|++ |+.+++++|++|++|+||||+..||.+|+++||
T Consensus 149 ------------------------~~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 149 ------------------------GLRKPDPRI--------------YQLMLERLGVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 123888888 999999999999999999999999999999999
Q ss_pred CEEEecC
Q 019086 339 PCVVMRS 345 (346)
Q Consensus 339 ~~i~v~~ 345 (346)
.+|++.+
T Consensus 191 ~~i~v~~ 197 (211)
T TIGR02247 191 TTIKVSD 197 (211)
T ss_pred EEEEECC
Confidence 9999864
No 35
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=2.5e-21 Score=169.92 Aligned_cols=100 Identities=23% Similarity=0.329 Sum_probs=84.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +.... ..++.++|+..+|+..+.+. .+.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn---~~~~~-~~~~~~~~l~~~f~~i~~~~---------------~~~------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTN---SPRDH-AVLVQELGLRDLFDVVIFSG---------------DVG------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeC---CchHH-HHHHHhcCCHHHCCEEEEcC---------------CCC-------
Confidence 67999999999999999999999999 55555 56666699998887754432 111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||.+|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 12788887 9999999999999999999999999999999999997
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
No 36
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.86 E-value=5.9e-21 Score=176.50 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=119.9
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCC---CCCCChHHHHHHHhhccCC-----------hHHHHHHHHHHh
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLRKSAGD-----------EDRMLVLFFNRI 148 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~---~~~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~ 148 (346)
++|+|+||+||||+|+... +..+++++++.++.. ...|....+..+....... .......++.++
T Consensus 9 ~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 4789999999999999886 667777777655211 1123333333322211000 011122344455
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 149 GWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 149 g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
|.+. ++. +.........+.... ....++||+.++|+.|+++ ++++|+||. ... ++.+|+.+
T Consensus 88 g~~~----~~~----~~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~---~~~-----~~~~gl~~ 148 (238)
T PRK10748 88 GLSA----EEA----SAGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNG---NAQ-----PELFGLGD 148 (238)
T ss_pred CCCH----HHH----HHHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECC---Cch-----HHHCCcHH
Confidence 5431 110 011111112222221 2367899999999999986 999999993 333 47789999
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRA 308 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~ 308 (346)
+|+..+.+. +. ...||+|++ |+.
T Consensus 149 ~fd~i~~~~-~~------------------------------------------~~~KP~p~~--------------~~~ 171 (238)
T PRK10748 149 YFEFVLRAG-PH------------------------------------------GRSKPFSDM--------------YHL 171 (238)
T ss_pred hhceeEecc-cC------------------------------------------CcCCCcHHH--------------HHH
Confidence 888754332 11 112888888 999
Q ss_pred HHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecC
Q 019086 309 GAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 309 ~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~ 345 (346)
+++++|++|++|+||||+ ..||.+|+++||.+|++..
T Consensus 172 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 209 (238)
T PRK10748 172 AAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINP 209 (238)
T ss_pred HHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence 999999999999999999 5999999999999999864
No 37
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.86 E-value=1.1e-20 Score=169.49 Aligned_cols=183 Identities=11% Similarity=0.047 Sum_probs=122.7
Q ss_pred eEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC------hHHHHHHHHHHhCCCCCCCChh
Q 019086 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD------EDRMLVLFFNRIGWPTSVPTNE 158 (346)
Q Consensus 85 k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~g~~~~~~~~~ 158 (346)
++||||+||||+|+... +..+++++++++|.. ..+.+.+..+.+..... ...+...+....... ......
T Consensus 1 ~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 76 (197)
T TIGR01548 1 QALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSER-VRDAPT 76 (197)
T ss_pred CceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchh-ccCCcc
Confidence 37999999999999986 889999999999854 36666666665432110 011212111111000 000011
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--------cCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 159 KKAFVKNVLQEKKNALDEFLA--------SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
.+.+...+.+.|..... .....+.+++.++|+.|+++|++++|+|| +....++.+++.+|+..+|
T Consensus 77 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f 149 (197)
T TIGR01548 77 ----LEAVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILF 149 (197)
T ss_pred ----HHHHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhC
Confidence 12333333333332110 01234567779999999999999999999 6789999999999999988
Q ss_pred hheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHH
Q 019086 231 KIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGA 310 (346)
Q Consensus 231 ~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~ 310 (346)
+..+.+. +. .. ||+|.+ |..++
T Consensus 150 ~~~~~~~-~~------------------------------------------~~-KP~p~~--------------~~~~~ 171 (197)
T TIGR01548 150 PVQIWME-DC------------------------------------------PP-KPNPEP--------------LILAA 171 (197)
T ss_pred CEEEeec-CC------------------------------------------CC-CcCHHH--------------HHHHH
Confidence 7643222 11 11 677777 99999
Q ss_pred HHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 311 EYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 311 e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
+++|+++++|++|||+.+||.+|+++
T Consensus 172 ~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 172 KALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999875
No 38
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.85 E-value=3.3e-20 Score=169.03 Aligned_cols=188 Identities=22% Similarity=0.347 Sum_probs=139.6
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+.+++||+||||+|++.. +.++|...+.++|.+ ++........ +....++.+.+...+..+-+
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~m---G~~~~eaa~~~~~~~~dp~s-------- 72 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSM---GKRTSEAARLFVKKLPDPVS-------- 72 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHc---CCCHHHHHHHHHhhcCCCCC--------
Confidence 34569999999999999997 889999999999986 5544444433 33566677777655544432
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC-cccchhheecchhhH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEV 240 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~e~ 240 (346)
.++...+..+.+.+++ ....+.||+.++++.|+.+|++++++|+ ..+...+....+++ +...|...+.+.
T Consensus 73 -~ee~~~e~~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~---s~~~~~~~k~~~~~~~~~~f~~~v~~d--- 143 (222)
T KOG2914|consen 73 -REEFNKEEEEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATS---STSASFELKISRHEDIFKNFSHVVLGD--- 143 (222)
T ss_pred -HHHHHHHHHHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEec---CCcccHHHHHHHhhHHHHhcCCCeecC---
Confidence 2344455555555554 2356899999999999999999999999 44566666666555 444444333321
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC-Cc
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RN 319 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p-~e 319 (346)
+..|..| ||+|+| |..+++++|..+ +.
T Consensus 144 ----------~~~v~~g----------------------------KP~Pdi--------------~l~A~~~l~~~~~~k 171 (222)
T KOG2914|consen 144 ----------DPEVKNG----------------------------KPDPDI--------------YLKAAKRLGVPPPSK 171 (222)
T ss_pred ----------CccccCC----------------------------CCCchH--------------HHHHHHhcCCCCccc
Confidence 2333333 888888 999999999998 99
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++++|+..++++|++|||++|+|++
T Consensus 172 ~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 172 CLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred eEEECCCHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999999999976
No 39
>PLN02811 hydrolase
Probab=99.85 E-value=2e-20 Score=170.68 Aligned_cols=181 Identities=19% Similarity=0.303 Sum_probs=123.3
Q ss_pred ccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHH
Q 019086 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEK 170 (346)
Q Consensus 91 lDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 170 (346)
|||||+|+... +..+|.++++++|++ ++.+.+....+ .....++..+...++.+.....+ .+....
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~G---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 66 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMMG---KKAIEAARIFVEESGLSDSLSPE-------DFLVER 66 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHccC---CCHHHHHHHHHHHhCCCCCCCHH-------HHHHHH
Confidence 79999999987 889999999999996 44443333332 23344555666666654322111 112222
Q ss_pred HHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHH-HHHHHhCcccchhheecchhhHHHhhhhccc
Q 019086 171 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLGSERISKIKIVGNEEVERSLYGQFV 249 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~-~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~ 249 (346)
...+.... ...+++||+.++|+.|+++|++++|+||. ...... ......++.++|+..+ +.++.
T Consensus 67 ~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~---~~~~~~~~~~~~~~l~~~f~~i~-~~~~~--------- 131 (220)
T PLN02811 67 EAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGS---HKRHFDLKTQRHGELFSLMHHVV-TGDDP--------- 131 (220)
T ss_pred HHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHcccHHHHhhCCEEE-ECChh---------
Confidence 22222222 23568999999999999999999999994 333332 2333346666665532 22100
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEcCC
Q 019086 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGS 326 (346)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg---v~p~e~i~VGDs 326 (346)
.+. ..||+|++ |..+++++| ++|++|+||||+
T Consensus 132 ---~~~----------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs 166 (220)
T PLN02811 132 ---EVK----------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDA 166 (220)
T ss_pred ---hcc----------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEecc
Confidence 121 12888888 999999997 999999999999
Q ss_pred hhhHHHHHHcCCCEEEecC
Q 019086 327 QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 327 ~~Di~aA~~aG~~~i~v~~ 345 (346)
..|+++|+++||++|+|++
T Consensus 167 ~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 167 PSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred HhhHHHHHHCCCeEEEEeC
Confidence 9999999999999999975
No 40
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.85 E-value=9.6e-21 Score=170.16 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=82.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
+++||+.++|+.|+++|++++|+|| +........+.. .++..+|+..+.+. .+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn---~~~~~~~~~~~~~~~l~~~fd~v~~s~---------------~~~------- 138 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSN---TNRLHTTFWPEEYPEVRAAADHIYLSQ---------------DLG------- 138 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcC---CchhhHHHHHhhchhHHHhcCEEEEec---------------ccC-------
Confidence 4899999999999999999999999 444544444433 36666666543332 221
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||.+|+
T Consensus 139 ---------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 139 ---------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 23888888 9999999999999999999999999999999999999
Q ss_pred ecC
Q 019086 343 MRS 345 (346)
Q Consensus 343 v~~ 345 (346)
+.+
T Consensus 184 ~~~ 186 (199)
T PRK09456 184 VTD 186 (199)
T ss_pred ecC
Confidence 875
No 41
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.85 E-value=4.8e-21 Score=169.66 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=115.0
Q ss_pred EEEEeccCccccccccccHHHHHHHHH-----HcCCCCCCCChH-HHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAP-IYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~-----~~gi~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
+|+||+||||+|+... +..++++++. ++|++. .+.. ....++... |.... ......+ .+.
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~-g~~~~---~~~~~~~----~~~--- 67 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREY-GTTLA---GLMILHE----IDA--- 67 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHH-chHHH---HHHHhhC----CCH---
Confidence 7999999999999765 5677776654 567752 1111 111111111 11111 1111111 110
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhh
Q 019086 160 KAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 239 (346)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e 239 (346)
+.+.+.+.+.......+++||+.++|+.|+ .+++|+|| +....+...++.+|+..+|+..+.+. +
T Consensus 68 --------~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn---~~~~~~~~~l~~~gl~~~fd~i~~~~-~ 132 (184)
T TIGR01993 68 --------DEYLRYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTN---GDRAHARRALNRLGIEDCFDGIFCFD-T 132 (184)
T ss_pred --------HHHHHHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeC---CCHHHHHHHHHHcCcHhhhCeEEEee-c
Confidence 112222222111123568999999999998 48999999 66788999999999998887643332 1
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
. ... ....||+|++ |+.+++++|++|++
T Consensus 133 ~--------------~~~------------------------~~~~KP~p~~--------------~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 133 A--------------NPD------------------------YLLPKPSPQA--------------YEKALREAGVDPER 160 (184)
T ss_pred c--------------cCc------------------------cCCCCCCHHH--------------HHHHHHHhCCCccc
Confidence 1 100 0012777777 99999999999999
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEe
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|+||||+..|+.+|+++||++|+|
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999986
No 42
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.84 E-value=1.7e-20 Score=170.80 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=91.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+++|++.++|++++.+ ++++|+|| +........+..+|+.++|+..+++.+-+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~~s~~~g--------------------- 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVFISEDVG--------------------- 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEEEecccc---------------------
Confidence 467999999999999999 99999999 67788999999999999999877665332
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~ 340 (346)
..||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+
T Consensus 152 ----------------------~~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 152 ----------------------VAKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred ----------------------cCCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 22888888 9999999999999999999997 7889999999999
Q ss_pred EEecC
Q 019086 341 VVMRS 345 (346)
Q Consensus 341 i~v~~ 345 (346)
|++..
T Consensus 196 vwi~~ 200 (229)
T COG1011 196 VWINR 200 (229)
T ss_pred EEECC
Confidence 99864
No 43
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.81 E-value=4e-19 Score=159.07 Aligned_cols=173 Identities=13% Similarity=0.144 Sum_probs=110.1
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
+|+|||||||||+|+. .++.++++++|++. +.+...++ +..... +...++. ..++ .
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~g---~~~~~~---~~~~~~~----~~~~----~ 57 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMIQ---DERFRD---PGELFGC----DQEL----A 57 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHHh---HhhhcC---HHHHhcc----cHHH----H
Confidence 6899999999999944 45678888899862 22222221 111111 1122221 1011 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHh
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS 243 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~ 243 (346)
.++...+.. ... .....++||+.++|++|++++ +++++|| .........+..+++..+|..
T Consensus 58 ~~~~~~~~~---~~~-~~~~~~~pG~~e~L~~L~~~~-~~~i~Tn---~~~~~~~~~~~~~~l~~~f~~----------- 118 (197)
T PHA02597 58 KKLIEKYNN---SDF-IRYLSAYDDALDVINKLKEDY-DFVAVTA---LGDSIDALLNRQFNLNALFPG----------- 118 (197)
T ss_pred HHHhhhhhH---HHH-HHhccCCCCHHHHHHHHHhcC-CEEEEeC---CccchhHHHHhhCCHHHhCCC-----------
Confidence 122222221 111 223568999999999999974 7888898 444555557778888766532
Q ss_pred hhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEE
Q 019086 244 LYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLI 323 (346)
Q Consensus 244 ~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~V 323 (346)
+|+.++.++. .||+|++ |+.+++++| |++|+||
T Consensus 119 ~f~~i~~~~~-------------------------------~~~kp~~--------------~~~a~~~~~--~~~~v~v 151 (197)
T PHA02597 119 AFSEVLMCGH-------------------------------DESKEKL--------------FIKAKEKYG--DRVVCFV 151 (197)
T ss_pred cccEEEEecc-------------------------------CcccHHH--------------HHHHHHHhC--CCcEEEe
Confidence 1222222221 1455555 999999999 8999999
Q ss_pred cCChhhHHHHHHc--CCCEEEecCC
Q 019086 324 AGSQSGVAGAQRI--GMPCVVMRSR 346 (346)
Q Consensus 324 GDs~~Di~aA~~a--G~~~i~v~~~ 346 (346)
||+..|+.+|+++ ||++|++.++
T Consensus 152 gDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred CCCHHHHHHHHHHHcCCcEEEecch
Confidence 9999999999999 9999999763
No 44
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.81 E-value=2.2e-19 Score=163.06 Aligned_cols=183 Identities=15% Similarity=0.190 Sum_probs=114.2
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHH
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKK 160 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~ 160 (346)
.+.+++++||+||||+++.. +.+++..+|.+. ....+.....+....+...+..++..-....
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----- 73 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE------EVSEITERAMRGELDFKASLRERVALLKGLP----- 73 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH------HHHHHHHHHHcCCCCHHHHHHHHHHHhCCCC-----
Confidence 34578999999999999753 356677777751 1111111111111111112222211100110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhH
Q 019086 161 AFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEV 240 (346)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~ 240 (346)
.+.+.... ...+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.
T Consensus 74 ----------~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~- 137 (219)
T TIGR00338 74 ----------VELLKEVR--ENLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDG- 137 (219)
T ss_pred ----------HHHHHHHH--hcCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECC-
Confidence 11112222 2256899999999999999999999999 7789999999999999877554322210
Q ss_pred HHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcE
Q 019086 241 ERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC 320 (346)
Q Consensus 241 ~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~ 320 (346)
.+...+.+... ..+|.|.+ |+.+++++++++++|
T Consensus 138 ---~~~~~~~~~~~-----------------------------~~~~k~~~--------------~~~~~~~~~~~~~~~ 171 (219)
T TIGR00338 138 ---KLTGLVEGPIV-----------------------------DASYKGKT--------------LLILLRKEGISPENT 171 (219)
T ss_pred ---EEEEEecCccc-----------------------------CCcccHHH--------------HHHHHHHcCCCHHHE
Confidence 01111111100 00233333 999999999999999
Q ss_pred EEEcCChhhHHHHHHcCCCEEE
Q 019086 321 FLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 321 i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
++|||+.+|+.+|+.+|+..++
T Consensus 172 i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 172 VAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred EEEECCHHHHHHHHhCCCeEEe
Confidence 9999999999999999998754
No 45
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.79 E-value=6.2e-19 Score=151.37 Aligned_cols=154 Identities=19% Similarity=0.294 Sum_probs=107.3
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
+|+||+||||+|+... ...+|+++++++|.+. +.+....+. ....+ ..+... .++
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~g~---~~~~~-~~~~~~---------------~~~ 55 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGEDF-----QALKALRGL---AEELL-YRIATS---------------FEE 55 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhcccH-----HHHHHHHcc---ChHHH-HHHHHH---------------HHH
Confidence 4899999999999765 7799999999988641 222222211 11111 111000 001
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 245 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f 245 (346)
+..+ ......+||+.++|+.|+++|++++|+|| +....+...++.+ +..+|+..+.+.
T Consensus 56 --------~~~~--~~~~~~~~g~~e~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~-l~~~f~~i~~~~-------- 113 (154)
T TIGR01549 56 --------LLGY--DAEEAYIRGAADLLKRLKEAGIKLGIISN---GSLRAQKLLLRKH-LGDYFDLILGSD-------- 113 (154)
T ss_pred --------HhCc--chhheeccCHHHHHHHHHHCcCeEEEEeC---CchHHHHHHHHHH-HHhcCcEEEecC--------
Confidence 1111 12344679999999999999999999999 6678888888887 777665532211
Q ss_pred hccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 246 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 246 ~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
.+ . .||+|++ |..+++++|+++ +|++|||
T Consensus 114 -------~~----------------------------~-~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGD 142 (154)
T TIGR01549 114 -------EF----------------------------G-AKPEPEI--------------FLAALESLGLPP-EVLHVGD 142 (154)
T ss_pred -------CC----------------------------C-CCcCHHH--------------HHHHHHHcCCCC-CEEEEeC
Confidence 11 1 2777777 999999999999 9999999
Q ss_pred ChhhHHHHHHcC
Q 019086 326 SQSGVAGAQRIG 337 (346)
Q Consensus 326 s~~Di~aA~~aG 337 (346)
+..|+.+|+++|
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999999998
No 46
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.79 E-value=3.1e-18 Score=152.74 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.+
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g---------------------- 133 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG---------------------- 133 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC----------------------
Confidence 46999999999999999999999999 77899999999999988765544332111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..||++.+. ..+.+++.+ ++.+++++|+++++|++|||+.+|+.+|+.+|+.+++
T Consensus 134 ---------------------~~~p~~~~~-~~~~~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~ 188 (201)
T TIGR01491 134 ---------------------FIQPDGIVR-VTFDNKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVADISISL 188 (201)
T ss_pred ---------------------eEecceeeE-EccccHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEE
Confidence 013332210 011222233 8888899999999999999999999999999999887
Q ss_pred ec
Q 019086 343 MR 344 (346)
Q Consensus 343 v~ 344 (346)
.+
T Consensus 189 ~~ 190 (201)
T TIGR01491 189 GD 190 (201)
T ss_pred CC
Confidence 65
No 47
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.78 E-value=1.5e-19 Score=158.45 Aligned_cols=167 Identities=17% Similarity=0.198 Sum_probs=109.6
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChH-HHHHHHhhccCChH---H----HHHHHHHHhCCCCCCCCh
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAP-IYTDLLRKSAGDED---R----MLVLFFNRIGWPTSVPTN 157 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~-~~~~~~~~~~g~~~---~----~~~~~~~~~g~~~~~~~~ 157 (346)
+|+||+||||+|++.. +..++.+++.+.+.....|... ..........+... . ....+..++|.+.. .
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~ 76 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE---P 76 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC---H
Confidence 5899999999999975 6677777776654310001111 11111211111111 1 23344555555321 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
. ..+.+.... ...+++||+.++|+ +++|+|| +....+...++++|+..+|+.. ++.
T Consensus 77 -------~----~~~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v-~~~ 132 (175)
T TIGR01493 77 -------K----YGERLRDAY--KNLPPWPDSAAALA-------RVAILSN---ASHWAFDQFAQQAGLPWYFDRA-FSV 132 (175)
T ss_pred -------H----HHHHHHHHH--hcCCCCCchHHHHH-------HHhhhhC---CCHHHHHHHHHHCCCHHHHhhh-ccH
Confidence 1 111222222 13569999999998 4899999 6788899999999999988863 444
Q ss_pred hhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCC
Q 019086 238 EEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV 317 (346)
Q Consensus 238 ~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p 317 (346)
+++ ...||+|++ |+.+++++|++|
T Consensus 133 ~~~------------------------------------------~~~KP~p~~--------------f~~~~~~~~~~p 156 (175)
T TIGR01493 133 DTV------------------------------------------RAYKPDPVV--------------YELVFDTVGLPP 156 (175)
T ss_pred hhc------------------------------------------CCCCCCHHH--------------HHHHHHHHCCCH
Confidence 332 122888888 999999999999
Q ss_pred CcEEEEcCChhhHHHHHHc
Q 019086 318 RNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~a 336 (346)
++|+||||+.+||.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999874
No 48
>PLN02954 phosphoserine phosphatase
Probab=99.78 E-value=2.7e-18 Score=156.47 Aligned_cols=184 Identities=13% Similarity=0.133 Sum_probs=113.0
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+++|+|+|||||||+++.. +..+++++|.+ ....+....+.+....+.+.+..+++.... .
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~------ 70 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAG------EAVAEWTAKAMGGSVPFEEALAARLSLFKP-S------ 70 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCCh------HHHHHHHHHHHCCCCCHHHHHHHHHHHcCC-C------
Confidence 4688999999999999754 37788888885 222222222222233343334333322110 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc--cchhheecchhh
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEE 239 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~--~~f~~~i~~~~e 239 (346)
. +...+.+. .....++||+.++|+.|+++|++++|+|+ +.+..++.+++.+|+. .+|...+...++
T Consensus 71 -~----~~~~~~~~----~~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~ 138 (224)
T PLN02954 71 -L----SQVEEFLE----KRPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDS 138 (224)
T ss_pred -H----HHHHHHHH----HccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCC
Confidence 0 11111121 12356899999999999999999999999 7789999999999997 345432211111
Q ss_pred HHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCc
Q 019086 240 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRN 319 (346)
Q Consensus 240 ~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e 319 (346)
..+.|.... .|. +..+++|.. ++.+++.+|. ++
T Consensus 139 -------g~~~g~~~~------------------------------~~~-----~~~~~K~~~---i~~~~~~~~~--~~ 171 (224)
T PLN02954 139 -------GEYAGFDEN------------------------------EPT-----SRSGGKAEA---VQHIKKKHGY--KT 171 (224)
T ss_pred -------CcEECccCC------------------------------Ccc-----cCCccHHHH---HHHHHHHcCC--Cc
Confidence 111111000 000 001112222 7888888875 68
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEe
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|++|||+.+|+.+|+++|+.+++.
T Consensus 172 ~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 172 MVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred eEEEeCCHHHHHhhhcCCCCEEEe
Confidence 999999999999999999887654
No 49
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.77 E-value=2.7e-18 Score=165.51 Aligned_cols=182 Identities=14% Similarity=0.174 Sum_probs=117.3
Q ss_pred CCceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
..+++|+|||||||+.. ..+.++++..|.. ................+.+.+..++..-...+
T Consensus 108 ~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~------~~v~~it~~~m~Geldf~esl~~rv~~l~g~~------ 169 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI------ECIDEIAKLAGTG------EEVAEVTERAMRGELDFEASLRQRVATLKGAD------ 169 (322)
T ss_pred cCCCEEEEECCCCCcch------HHHHHHHHHhCCc------hHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCC------
Confidence 46789999999999843 4557777788876 22222222222223333333333332111110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
...+.... ..++++||+.++|+.|+++|++++|+|+ ++....+.+++++|++..+...+ +..
T Consensus 170 ---------~~il~~v~--~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~l----ei~ 231 (322)
T PRK11133 170 ---------ANILQQVR--ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANEL----EIM 231 (322)
T ss_pred ---------HHHHHHHH--HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEE----EEE
Confidence 01111111 2367999999999999999999999999 77788899999999987554221 111
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
.+.++..+.|..+ .+ ||.+.+ ++.+++++|+++++|+
T Consensus 232 dg~ltg~v~g~iv-~~----------------------------k~K~~~--------------L~~la~~lgi~~~qtI 268 (322)
T PRK11133 232 DGKLTGNVLGDIV-DA----------------------------QYKADT--------------LTRLAQEYEIPLAQTV 268 (322)
T ss_pred CCEEEeEecCccC-Cc----------------------------ccHHHH--------------HHHHHHHcCCChhhEE
Confidence 1122222333211 11 333333 9999999999999999
Q ss_pred EEcCChhhHHHHHHcCCCEEE
Q 019086 322 LIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+|||+.||+.|++.||+..++
T Consensus 269 aVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 269 AIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred EEECCHHHHHHHHHCCCeEEe
Confidence 999999999999999998876
No 50
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.73 E-value=3.7e-17 Score=140.31 Aligned_cols=109 Identities=14% Similarity=0.166 Sum_probs=81.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCc------------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~------------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
+++||+.++|+.|+++|++++|+||..... ...+..+++.+|+...+.+. .. ....
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~----------~~~~ 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF--CP----------HHPA 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE--CC----------CCCC
Confidence 378999999999999999999999942100 13566777888886321110 00 0000
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+.. +.+||+|++ |+.+++++|+++++|+||||+..|++
T Consensus 95 ~~~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~Di~ 132 (147)
T TIGR01656 95 DNC----------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRDLQ 132 (147)
T ss_pred CCC----------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHH
Confidence 000 123788777 99999999999999999999999999
Q ss_pred HHHHcCCCEEEecCC
Q 019086 332 GAQRIGMPCVVMRSR 346 (346)
Q Consensus 332 aA~~aG~~~i~v~~~ 346 (346)
+|+++||.+|+|.++
T Consensus 133 ~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 133 AARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHCCCCEEEecCC
Confidence 999999999999864
No 51
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.73 E-value=2e-16 Score=144.82 Aligned_cols=189 Identities=14% Similarity=0.091 Sum_probs=117.2
Q ss_pred ceEEEEeccCcccccccc---ccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccC-ChHHHHHHHHHHhCCCCCCCChhH
Q 019086 84 DLAVLLEVDGVLVDAYRF---GNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-DEDRMLVLFFNRIGWPTSVPTNEK 159 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~---~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~g~~~~~~~~~~ 159 (346)
+++|+||+.||+.+.... -++.+ .+.+.++--. +|..+....+...... ..+.+...+...+..+...+
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~-~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~---- 73 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYA-ASRLESFVND--NYESTIVENLRELGKTPEELILLRKLHAEMDKDRKAT---- 73 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHH-HHHHHHHHHH--hCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcc----
Confidence 468999999999985532 02122 2222221111 2333444443322111 11333333333333222211
Q ss_pred HHHHHHHHHH-HHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh---Ccccchhheec
Q 019086 160 KAFVKNVLQE-KKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIV 235 (346)
Q Consensus 160 ~~~~~~l~~~-~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l---gl~~~f~~~i~ 235 (346)
..+.+... +.+.|... ....+++||+.++|++|+++|++++|+|| +.......++.+. ++.++|+..
T Consensus 74 --~lk~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn---~s~~~~~~~~~~~~~~~L~~~f~~~-- 144 (220)
T TIGR01691 74 --PLKTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSS---GSVPAQKLLFGHSDAGNLTPYFSGY-- 144 (220)
T ss_pred --hHHHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHhhccccchhhhcceE--
Confidence 12233332 34444332 23456999999999999999999999999 5567677777765 455555432
Q ss_pred chhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCC
Q 019086 236 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 315 (346)
Q Consensus 236 ~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv 315 (346)
|+..+ ..||+|++ |..+++++|+
T Consensus 145 ---------fd~~~----------------------------------g~KP~p~~--------------y~~i~~~lgv 167 (220)
T TIGR01691 145 ---------FDTTV----------------------------------GLKTEAQS--------------YVKIAGQLGS 167 (220)
T ss_pred ---------EEeCc----------------------------------ccCCCHHH--------------HHHHHHHhCc
Confidence 21100 01788887 9999999999
Q ss_pred CCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 316 PVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 316 ~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+|++|+||||+..|+.+|+++||.+|++.+
T Consensus 168 ~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r 197 (220)
T TIGR01691 168 PPREILFLSDIINELDAARKAGLHTGQLVR 197 (220)
T ss_pred ChhHEEEEeCCHHHHHHHHHcCCEEEEEEC
Confidence 999999999999999999999999998754
No 52
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.69 E-value=1.5e-16 Score=133.58 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=79.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCc--------hhHHHHHHHHhCcccchhheecchhhHHHhhhhcccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~--------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~ 256 (346)
++||+.++|+.|+++|++++|+|| +. ...+..+++.+|+...+.+ ++. .
T Consensus 26 ~~~~v~~~l~~L~~~g~~l~i~Sn---~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~--~---------------- 82 (132)
T TIGR01662 26 LYPEVPDALAELKEAGYKVVIVTN---QSGIGRGKFSSGRVARRLEELGVPIDVLY--ACP--H---------------- 82 (132)
T ss_pred eCCCHHHHHHHHHHCCCEEEEEEC---CccccccHHHHHHHHHHHHHCCCCEEEEE--ECC--C----------------
Confidence 789999999999999999999999 55 5668888999998633221 111 0
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc-CCCCCcEEEEcC-ChhhHHHHH
Q 019086 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGAQ 334 (346)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l-gv~p~e~i~VGD-s~~Di~aA~ 334 (346)
..||+|++ |+.+++++ +++|++|+|||| +..|+.+|+
T Consensus 83 ---------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~ 121 (132)
T TIGR01662 83 ---------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAAK 121 (132)
T ss_pred ---------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHHH
Confidence 12777777 99999999 599999999999 689999999
Q ss_pred HcCCCEEEec
Q 019086 335 RIGMPCVVMR 344 (346)
Q Consensus 335 ~aG~~~i~v~ 344 (346)
++|+.+|+++
T Consensus 122 ~~Gi~~i~~~ 131 (132)
T TIGR01662 122 RAGLAFILVA 131 (132)
T ss_pred HCCCeEEEee
Confidence 9999999986
No 53
>PRK06769 hypothetical protein; Validated
Probab=99.69 E-value=1.5e-16 Score=140.49 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=79.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-----hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-----DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-----~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
+++||+.++|++|+++|++++|+||...-. .......++.+|++.++..... .++.+
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--------------~~~~~---- 89 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHK--------------HGDGC---- 89 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCC--------------CCCCC----
Confidence 388999999999999999999999942100 0113334666777654322110 11111
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
..+||+|++ |+.++++++++|++|+||||+..|+.+|+++||
T Consensus 90 ------------------------~~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 90 ------------------------ECRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 123888888 999999999999999999999999999999999
Q ss_pred CEEEecCC
Q 019086 339 PCVVMRSR 346 (346)
Q Consensus 339 ~~i~v~~~ 346 (346)
.+|++.++
T Consensus 132 ~~i~v~~g 139 (173)
T PRK06769 132 TTILVRTG 139 (173)
T ss_pred eEEEEecC
Confidence 99999763
No 54
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.67 E-value=3.5e-17 Score=144.50 Aligned_cols=105 Identities=12% Similarity=0.029 Sum_probs=84.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcc---------cchhheecchhhHHHhhhhccccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~---------~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
..+++||+.++|+.|+++|++++|+|| + ....++.+++.+|+. .+|+..+.+.
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn---~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~-------------- 105 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASW---NDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIY-------------- 105 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeC---CCChHHHHHHHHhCCcCCCCCcccHHHhceeeeecc--------------
Confidence 356899999999999999999999999 5 678889999999997 7666543222
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc--CCCCCcEEEEcCChhh
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSG 329 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l--gv~p~e~i~VGDs~~D 329 (346)
.. ...||.+.+ ++.+.+.+ |++|++|+||||+..|
T Consensus 106 -~~----------------------------~~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~d 142 (174)
T TIGR01685 106 -KP----------------------------NKAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDN 142 (174)
T ss_pred -CC----------------------------chHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHh
Confidence 11 001444444 77776777 8999999999999999
Q ss_pred HHHHHHcCCCEEEecCC
Q 019086 330 VAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (346)
+.+|+++|+.+++++++
T Consensus 143 i~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 143 VREVWGYGVTSCYCPSG 159 (174)
T ss_pred HHHHHHhCCEEEEcCCC
Confidence 99999999999999764
No 55
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.66 E-value=4.1e-16 Score=138.17 Aligned_cols=108 Identities=15% Similarity=0.071 Sum_probs=77.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCC----c--------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~----~--------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
.++||+.++|++|+++|++++|+||.... . .......++.+|+. |+..+.+.. ...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i~~~~~----------~~~ 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGIYYCPH----------HPE 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceEEECCC----------CCC
Confidence 48899999999999999999999994210 0 12233445555652 332221110 000
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+.+ ...||+|.+ |..+++++|+++++|+||||+.+|+.
T Consensus 97 ~~~----------------------------~~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di~ 134 (181)
T PRK08942 97 DGC----------------------------DCRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDLQ 134 (181)
T ss_pred CCC----------------------------cCCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHHH
Confidence 111 123888888 99999999999999999999999999
Q ss_pred HHHHcCCCEEEecC
Q 019086 332 GAQRIGMPCVVMRS 345 (346)
Q Consensus 332 aA~~aG~~~i~v~~ 345 (346)
+|+++||.+|++++
T Consensus 135 ~A~~aG~~~i~v~~ 148 (181)
T PRK08942 135 AAAAAGVTPVLVRT 148 (181)
T ss_pred HHHHCCCeEEEEcC
Confidence 99999999999875
No 56
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.66 E-value=9.9e-16 Score=136.79 Aligned_cols=178 Identities=16% Similarity=0.204 Sum_probs=123.3
Q ss_pred CCceEEEEeccCccccccccccHHHHH----HHH-HHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFGNRQAFN----VAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPT 156 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~~~~a~~----~~~-~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~ 156 (346)
+.+++++||+|.||+....- ...+.. +.| .++|++.. ...+....+...+|..
T Consensus 13 ~~~~~l~FDiDdtLYp~St~-i~~~~~~nI~~f~~eklgi~~e----------------~a~~L~~~~yk~YG~t----- 70 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTG-IQLMMRNNIQEFFVEKLGISEE----------------EAEELRESLYKEYGLT----- 70 (244)
T ss_pred ccceEEEEecccccccCchh-HHHHHHHHHHHHHHHHhCCChh----------------hhHHHHHHHHHHHhHH-----
Confidence 37899999999999985542 223333 333 45777631 1122222333444321
Q ss_pred hhHHHHHHHHH--------HHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 157 NEKKAFVKNVL--------QEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 157 ~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+..+. .++.+.....+.-+.++|.|-.+++|-.|+.++ .++.|| ++...+..++.+||+++
T Consensus 71 ------~aGL~~~~~~~d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieD 139 (244)
T KOG3109|consen 71 ------MAGLKAVGYIFDADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIED 139 (244)
T ss_pred ------HHHHHHhcccCCHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHH
Confidence 11111 222322333332234778899999999999975 789999 77889999999999999
Q ss_pred chhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcc--ccccCCCCCchhHHHHHHH
Q 019086 229 ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKL--SVDIDTSSPESLDKIVAAL 306 (346)
Q Consensus 229 ~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP--~p~i~~p~~~~~~~~~~~~ 306 (346)
.|+.++...-. -| .+-++||+++ +|
T Consensus 140 cFegii~~e~~----------------------------------------------np~~~~~vcKP~~~-------af 166 (244)
T KOG3109|consen 140 CFEGIICFETL----------------------------------------------NPIEKTVVCKPSEE-------AF 166 (244)
T ss_pred hccceeEeecc----------------------------------------------CCCCCceeecCCHH-------HH
Confidence 99886533200 23 5566788777 59
Q ss_pred HHHHHHcCCC-CCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 307 RAGAEYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 307 ~~~~e~lgv~-p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+.+.+..|+. |.+++||+||.++|.+|++.||.++++..
T Consensus 167 E~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 167 EKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred HHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 9999999998 99999999999999999999999999863
No 57
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.66 E-value=4.9e-16 Score=135.72 Aligned_cols=109 Identities=9% Similarity=0.093 Sum_probs=84.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC------------chhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~------------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
++++||+.++|++|+++|++++|+||...- ....+..+++.+|+. |+..+++.. ..
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~----------~~ 95 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPH----------FP 95 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCC----------CC
Confidence 348999999999999999999999994200 234677788899996 543333310 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.+.+ ..+||+|++ |+.+++++++++++|+||||+.+|+
T Consensus 96 ~~~~----------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~~~Di 133 (161)
T TIGR01261 96 DDNC----------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDRETDM 133 (161)
T ss_pred CCCC----------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCCHHHH
Confidence 0111 234888888 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEecC
Q 019086 331 AGAQRIGMPCVVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~i~v~~ 345 (346)
.+|+++||.++++..
T Consensus 134 ~~A~~aGi~~i~~~~ 148 (161)
T TIGR01261 134 QLAENLGIRGIQYDE 148 (161)
T ss_pred HHHHHCCCeEEEECh
Confidence 999999999999875
No 58
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.65 E-value=1.6e-15 Score=140.13 Aligned_cols=100 Identities=7% Similarity=0.090 Sum_probs=73.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..+.+++.++|+.|+++|++++++||...+ .+..++.+++.+|+..+|+.. ++. +.....
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~--------------d~~~~~---- 173 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAG--------------DKPGQY---- 173 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECC--------------CCCCCC----
Confidence 447778999999999999999999994211 456888999999999877543 222 111100
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
||++ . .+++..|+ ++||||+.+||.+|+++|+.+|
T Consensus 174 ------------------------Kp~~----------------~-~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 174 ------------------------QYTK----------------T-QWIQDKNI----RIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ------------------------CCCH----------------H-HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEE
Confidence 2221 2 23566666 8999999999999999999999
Q ss_pred EecCC
Q 019086 342 VMRSR 346 (346)
Q Consensus 342 ~v~~~ 346 (346)
.|.++
T Consensus 209 ~V~~g 213 (237)
T TIGR01672 209 RILRA 213 (237)
T ss_pred EEEec
Confidence 98753
No 59
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.65 E-value=1.8e-15 Score=138.09 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=76.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|+ +....++.+++++ +.. + .+++. +....++.+.
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~--~-~i~~n--------~~~~~~~~~~------- 130 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPK--E-QIYCN--------GSDFSGEYIT------- 130 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCc--C-cEEEe--------EEEecCCeeE-------
Confidence 57999999999999999999999999 7788999999987 643 1 11111 1112222221
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCC---CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDT---SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~---p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
..||+|.... ..... ...++++++.++++||+|||+.+|+.+|++||+.
T Consensus 131 ---------------------~~kp~p~~~~~~~~~~~~-------K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 131 ---------------------ITWPHPCDEHCQNHCGCC-------KPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred ---------------------EeccCCccccccccCCCc-------hHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcc
Confidence 2266655310 00000 2357788999999999999999999999999995
Q ss_pred EE
Q 019086 340 CV 341 (346)
Q Consensus 340 ~i 341 (346)
++
T Consensus 183 ~a 184 (219)
T PRK09552 183 FA 184 (219)
T ss_pred ee
Confidence 44
No 60
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.64 E-value=7.8e-15 Score=131.71 Aligned_cols=103 Identities=12% Similarity=0.107 Sum_probs=74.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++ ++++|+|| +....++.+++++|+..+|...+...+++ ++.|..
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------~i~~~~--------- 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------MITGYD--------- 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCC-------eEECcc---------
Confidence 56899999999999999 99999999 77899999999999988775432221110 111110
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+|. | ++ ...+++.++..+++|++|||+.+|+.+++++|+.+.+
T Consensus 127 -----------------------~~~-----p--~~-------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~ 169 (205)
T PRK13582 127 -----------------------LRQ-----P--DG-------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF 169 (205)
T ss_pred -----------------------ccc-----c--ch-------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE
Confidence 111 1 11 2334556666679999999999999999999987643
No 61
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.64 E-value=4.3e-15 Score=135.37 Aligned_cols=184 Identities=16% Similarity=0.215 Sum_probs=121.1
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAF 162 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~ 162 (346)
..++++|||||||++. ..+..+....|.. ..+.......+....++...+..++.+-...+.+.
T Consensus 4 ~~~L~vFD~D~TLi~~------~~~~~~~~~~g~~------~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~---- 67 (212)
T COG0560 4 MKKLAVFDLDGTLINA------ELIDELARGAGVG------EEVLAITERAMRGELDFEESLRLRVALLKGLPVEV---- 67 (212)
T ss_pred ccceEEEecccchhhH------HHHHHHHHHhCCH------HHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHH----
Confidence 4679999999999982 3445566666665 22222222222223333333333332222222111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 163 VKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
..+.. ....+++||+.++++.++++|.+|+|+|+ ++...++.+.+.+|++..+...+...+ +
T Consensus 68 -----------v~~~~-~~~~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d-G-- 129 (212)
T COG0560 68 -----------LEEVR-EEFLRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD-G-- 129 (212)
T ss_pred -----------HHHHH-HhcCcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC-C--
Confidence 11111 11156999999999999999999999999 889999999999999988766544432 2
Q ss_pred hhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEE
Q 019086 243 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFL 322 (346)
Q Consensus 243 ~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~ 322 (346)
.|+.-+.|..+... ..+.+++..++.+|++++++++
T Consensus 130 -~ltG~v~g~~~~~~-------------------------------------------~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 -KLTGRVVGPICDGE-------------------------------------------GKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred -EEeceeeeeecCcc-------------------------------------------hHHHHHHHHHHHcCCCHHHeEE
Confidence 34444444333210 1112388889999999999999
Q ss_pred EcCChhhHHHHHHcCCCEEEec
Q 019086 323 IAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 323 VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+|||.||+.|.+.+|.+.++-+
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~ 187 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNP 187 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCc
Confidence 9999999999999999987643
No 62
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.62 E-value=1.7e-15 Score=132.87 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=76.5
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCc---------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~---------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++||+.++|+.|+++|++++|+||..... ...+..+++.+|+.. +..+ +.++.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii-~~~~~--------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLA-ATHAG--------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEE-ecCCC---------------
Confidence 68999999999999999999999942100 024677889999853 2222 22110
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCCh------
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 327 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~------ 327 (346)
..+||+|++ ++.+++++| +++++|+||||+.
T Consensus 105 ---------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 105 ---------------------------LYRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ---------------------------CCCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 113788887 999999999 9999999999986
Q ss_pred --hhHHHHHHcCCCEEE
Q 019086 328 --SGVAGAQRIGMPCVV 342 (346)
Q Consensus 328 --~Di~aA~~aG~~~i~ 342 (346)
.|+++|+++|+.+++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
No 63
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.60 E-value=1.9e-14 Score=128.90 Aligned_cols=113 Identities=20% Similarity=0.265 Sum_probs=83.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
.++||+.++|+.++++|++++|+|+ +.+..++.+++.+|++.+|...+...++ ++.+|
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~-------------g~~~g------ 144 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESED-------------GIYTG------ 144 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCC-------------CEEeC------
Confidence 4899999999999999999999999 7789999999999999876553221111 11111
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
|+..... ..+.+ +..++..+++.++++++|++|||+.+|+.+++.+|..+++.
T Consensus 145 ----------------------~~~~~~~--~g~~K---~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 ----------------------NIDGNNC--KGEGK---VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ----------------------CccCCCC--CChHH---HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 1110000 01111 12378888899999999999999999999999999998876
Q ss_pred cC
Q 019086 344 RS 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 198 ~~ 199 (202)
T TIGR01490 198 PD 199 (202)
T ss_pred CC
Confidence 54
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.58 E-value=2.3e-14 Score=117.84 Aligned_cols=117 Identities=20% Similarity=0.142 Sum_probs=85.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
..++|++.++|++|+++|++++++|+ +....++..++.+|+..+++..+.+...... .....+. . +
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~--~-~----- 88 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPVITSNGAAIY---YPKEGLF--L-G----- 88 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhheeccchhhhh---ccccccc--c-c-----
Confidence 45899999999999999999999999 6688899999999998776664433221110 0000000 0 0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.......||.+.. +..+++.++..++++++|||+.+|+.+++.+|+.+++
T Consensus 89 ----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 89 ----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred ----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 0001112444444 8999999999999999999999999999999999987
Q ss_pred e
Q 019086 343 M 343 (346)
Q Consensus 343 v 343 (346)
|
T Consensus 139 v 139 (139)
T cd01427 139 V 139 (139)
T ss_pred C
Confidence 5
No 65
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.57 E-value=3e-14 Score=125.47 Aligned_cols=115 Identities=17% Similarity=0.163 Sum_probs=74.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.. ++++....+ ..+..+..-
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~~--~g~~~~~~~-------- 136 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIEI-YSNPASFDN--DGRHIVWPH-------- 136 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeEE-eccCceECC--CCcEEEecC--------
Confidence 57999999999999999999999999 6788899999999999888764 443221110 001111000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
+...-...+....++.+ ++...+.. +++++||||+.+|+.+|+++++-.
T Consensus 137 -----------------------~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 137 -----------------------HCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred -----------------------CCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 00000000111112333 55555443 899999999999999999987644
No 66
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.55 E-value=7.6e-14 Score=126.36 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=103.3
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCC--CCCChhHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPT--SVPTNEKKA 161 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~--~~~~~~~~~ 161 (346)
++.++|||||||++. .|.+...+.|+.. .. ... .....+.++...+..... .++
T Consensus 1 ~~la~FDlD~TLi~~-------~w~~~~~~~g~~~------~~-~~~----~~~~~~~~~~~~r~~ll~~~g~~------ 56 (203)
T TIGR02137 1 MEIACLDLEGVLVPE-------IWIAFAEKTGIDA------LK-ATT----RDIPDYDVLMKQRLRILDEHGLK------ 56 (203)
T ss_pred CeEEEEeCCcccHHH-------HHHHHHHHcCCcH------HH-HHh----cCCcCHHHHHHHHHHHHHHCCCC------
Confidence 356999999999964 4678888888651 11 111 122233333333332110 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHH
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVE 241 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~ 241 (346)
.+.+.+.+. ..+++||+.++|+.++++| +++|+|+ +....+..+++.+|++.+|...+...+.
T Consensus 57 ---------~~~i~~~~~--~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~-- 119 (203)
T TIGR02137 57 ---------LGDIQEVIA--TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDS-- 119 (203)
T ss_pred ---------HHHHHHHHH--hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecC--
Confidence 111222331 2468999999999999985 9999999 7889999999999999877643222110
Q ss_pred HhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEE
Q 019086 242 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF 321 (346)
Q Consensus 242 ~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i 321 (346)
..++|..+.. ||. + .. +...++..| .+|+
T Consensus 120 -----g~~tG~~~~~-----------------------------~~~-------K---~~----~l~~l~~~~---~~~v 148 (203)
T TIGR02137 120 -----DRVVGYQLRQ-----------------------------KDP-------K---RQ----SVIAFKSLY---YRVI 148 (203)
T ss_pred -----CeeECeeecC-----------------------------cch-------H---HH----HHHHHHhhC---CCEE
Confidence 1112221100 111 1 11 222334555 3899
Q ss_pred EEcCChhhHHHHHHcCCCEEEec
Q 019086 322 LIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 322 ~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
+|||+.||+.|++.||+..++-.
T Consensus 149 ~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 149 AAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred EEeCCHHHHHHHHhCCCCEEecC
Confidence 99999999999999999988643
No 67
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.55 E-value=3.5e-14 Score=124.19 Aligned_cols=106 Identities=17% Similarity=0.250 Sum_probs=75.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.++++|++++|+|+ +....++.+++++|+..++...+...+++ ...|....
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-------~~~g~~~~------- 134 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNG-------LLTGPIEG------- 134 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCC-------EEeCccCC-------
Confidence 55899999999999999999999999 77899999999999987665443221111 11111000
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
||. |....++. +++..++.+|++++++++|||+.+|+.|++.|
T Consensus 135 -----------------------~~~-----~~~~~K~~---~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 -----------------------QVN-----PEGECKGK---VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -----------------------ccc-----CCcchHHH---HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000 11111222 27777888899999999999999999999865
No 68
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.52 E-value=1e-13 Score=126.12 Aligned_cols=108 Identities=19% Similarity=0.139 Sum_probs=72.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.++|+.|+++|++++|+|+ +.+..++.+++.++....+ ++++ ....+..+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i----~~n~--------~~~~~~~~~------- 126 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRI----YCNE--------ADFSNEYIH------- 126 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccE----Eece--------eEeeCCeeE-------
Confidence 57999999999999999999999999 7788899999887543221 1110 011111111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p-~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
..||+|..... ...... -..+++.++..++++++|||+.+|+.+|+.||+
T Consensus 127 ---------------------~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 127 ---------------------IDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred ---------------------EeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 12565554210 000000 134566777788999999999999999999998
No 69
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.52 E-value=3.5e-14 Score=125.35 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=77.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-----c-------hhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----G-------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-----~-------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
++++||+.++|++|+++|++++|+||...- . ......++..+++. |+..+.+. ..
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~-----------~~ 91 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCP-----------HH 91 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECC-----------CC
Confidence 348999999999999999999999994310 0 01223344444444 22211110 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
..++.. +.+....+||+|++ |+.+++++|+++++|+||||+..||
T Consensus 92 ~~~~~~---------------------~~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 92 PEGVEE---------------------FRQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred Cccccc---------------------ccCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 000000 00001234888888 9999999999999999999999999
Q ss_pred HHHHHcCCCE-EEecC
Q 019086 331 AGAQRIGMPC-VVMRS 345 (346)
Q Consensus 331 ~aA~~aG~~~-i~v~~ 345 (346)
++|+++|+.+ +++++
T Consensus 137 ~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRT 152 (176)
T ss_pred HHHHHCCCcEEEEEec
Confidence 9999999998 78765
No 70
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.50 E-value=6.7e-14 Score=120.45 Aligned_cols=90 Identities=19% Similarity=0.331 Sum_probs=76.2
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
-|.+++.+++++++|+++.|+|| +.+..+....+++|+.-+...
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A--------------------------------- 91 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA--------------------------------- 91 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc---------------------------------
Confidence 34556778899999999999999 778889999999999864322
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
.||.+.- |+.++++++++++||+||||.. .||.++..+||.||+|.
T Consensus 92 -------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 92 -------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred -------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 1555444 9999999999999999999997 89999999999999984
No 71
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.49 E-value=2e-13 Score=122.34 Aligned_cols=88 Identities=19% Similarity=0.312 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--chhheecchhhHHHhhhhccccccccccCcch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+ .|.... +
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~----------------------~--- 177 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI----------------------G--- 177 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE----------------------T---
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc----------------------c---
Confidence 45789999999999999999999999 77899999999999954 221100 1
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
||++.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 178 -------------------------kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 178 -------------------------KPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -------------------------TTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -------------------------cccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 566665 99999999999999999999999999999997
No 72
>PRK11590 hypothetical protein; Provisional
Probab=99.48 E-value=3e-12 Score=116.34 Aligned_cols=191 Identities=12% Similarity=0.068 Sum_probs=112.7
Q ss_pred CceEEEEeccCccccccccccHHHHHHHH-HHcCCCCCCCChHHHHHHHhhccCChHHH-----HHHHHHH-hCCCCCCC
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM-----LVLFFNR-IGWPTSVP 155 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~-~~~gi~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~-~g~~~~~~ 155 (346)
..|+++||+||||++... ...|..++ .++|+.. ........+.+......... ...++.. .+. +
T Consensus 5 ~~k~~iFD~DGTL~~~d~---~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~----~ 75 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQDM---FGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGH----S 75 (211)
T ss_pred cceEEEEecCCCCcccch---HHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCC----C
Confidence 467999999999995554 47788877 8888762 22222222222110000000 0001111 122 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHH-HHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 156 TNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL-~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
.+ .++.+.+.+.+.|.+. ..++||+.++| +.+++.|++++|+|| +++..++.++..+|+..... +
T Consensus 76 ~~----~~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~~~~--~ 141 (211)
T PRK11590 76 EA----RLQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLPRVN--L 141 (211)
T ss_pred HH----HHHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccccCc--e
Confidence 11 1334444444444332 35799999999 568889999999999 77899999999999632111 2
Q ss_pred cchh-hHHHhhhhccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHc
Q 019086 235 VGNE-EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA 313 (346)
Q Consensus 235 ~~~~-e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~l 313 (346)
++.+ +. .|++.+.|... .+.|| ...+-+.+
T Consensus 142 i~t~l~~---~~tg~~~g~~c---------------~g~~K-------------------------------~~~l~~~~ 172 (211)
T PRK11590 142 IASQMQR---RYGGWVLTLRC---------------LGHEK-------------------------------VAQLERKI 172 (211)
T ss_pred EEEEEEE---EEccEECCccC---------------CChHH-------------------------------HHHHHHHh
Confidence 2221 11 23333322211 11122 34444455
Q ss_pred CCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 314 EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 314 gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|.+.+.+.+.|||.+|+.+.+.+|-+.++-++
T Consensus 173 ~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 173 GTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 77788899999999999999999999887554
No 73
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.48 E-value=3.1e-13 Score=127.89 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++|+||||+. .||.+|+++||.+|+|+++
T Consensus 208 ~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 208 FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 9999999999999999999995 9999999999999999874
No 74
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.46 E-value=2.5e-13 Score=119.53 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=79.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+++|++++|+|| +. ...+..+++.+|+..++.
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn---~~~~~~~~~~~~~~gl~~~~~------------------------------ 88 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSN---NAGEQRAKAVEKALGIPVLPH------------------------------ 88 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeC---CchHHHHHHHHHHcCCEEEcC------------------------------
Confidence 46899999999999999999999999 44 455666666666653210
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~ 340 (346)
..||+|.+ |..+++++|+++++|+||||+. .|+.+|+++||.+
T Consensus 89 ----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 89 ----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 11788877 9999999999999999999998 7999999999999
Q ss_pred EEecCC
Q 019086 341 VVMRSR 346 (346)
Q Consensus 341 i~v~~~ 346 (346)
|+|.++
T Consensus 133 i~v~~g 138 (170)
T TIGR01668 133 ILVEPL 138 (170)
T ss_pred EEEccC
Confidence 999764
No 75
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.45 E-value=1.6e-13 Score=118.87 Aligned_cols=82 Identities=13% Similarity=0.154 Sum_probs=69.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|++|+++|++++|+|| .....+..+++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn---~~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITG---RKAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEEC---CCCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 68899999999999999 6678889999999998765421
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||.|+. ++.+++++|+++++|++|||+.+|+.+++.+|+. +.+
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v 117 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAV 117 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-Eec
Confidence 333444 8999999999999999999999999999999997 444
No 76
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.41 E-value=9.6e-13 Score=123.29 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
++++.+.+..|++.+.+++++||. ...........+|+..+|+....+. .++.+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~---~~~~~~~~~~~~g~g~~~~~i~~~~------------~~~~~----------- 175 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGK---GRYYKRKDGLALDVGPFVTALEYAT------------DTKAT----------- 175 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCC---CCCCcCCCCCCCCchHHHHHHHHHh------------CCCce-----------
Confidence 578888899999999999999983 3333333444556665554321000 00000
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEec
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~ 344 (346)
...||+|.+ |+.+++++|++|++|+||||+. +||.+|+++||.+|+|.
T Consensus 176 -----------------~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 224 (257)
T TIGR01458 176 -----------------VVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVR 224 (257)
T ss_pred -----------------eecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 012666666 9999999999999999999996 89999999999999997
Q ss_pred CC
Q 019086 345 SR 346 (346)
Q Consensus 345 ~~ 346 (346)
++
T Consensus 225 ~G 226 (257)
T TIGR01458 225 TG 226 (257)
T ss_pred CC
Confidence 64
No 77
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.40 E-value=4.6e-12 Score=111.45 Aligned_cols=119 Identities=18% Similarity=0.317 Sum_probs=92.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHH
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFV 163 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 163 (346)
.++|.||||.|++..+.+ .+.....|+. +......+..+++..++.+.+..++.+
T Consensus 16 ~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~l------------- 70 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSL------------- 70 (227)
T ss_pred cCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHH-------------
Confidence 469999999999987765 5666677887 666667777777788887788777633
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--chhhe
Q 019086 164 KNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIK 233 (346)
Q Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~f~~~ 233 (346)
+.-.......++......+-||++|++..|+++|.+|+++|+ +++..+..+.+.||++. .+...
T Consensus 71 ---lqp~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~ 136 (227)
T KOG1615|consen 71 ---LQPLQVQVEQFVIKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANE 136 (227)
T ss_pred ---hcccHHHHHHHHhcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhhe
Confidence 333333344444455688999999999999999999999999 99999999999999985 44433
No 78
>PLN02645 phosphoglycolate phosphatase
Probab=99.38 E-value=5.5e-12 Score=121.33 Aligned_cols=41 Identities=10% Similarity=-0.005 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++++|+++++++||||+. .||.+|+++||.+|+|.++
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCC
Confidence 9999999999999999999997 8999999999999999764
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.37 E-value=5.4e-12 Score=116.69 Aligned_cols=98 Identities=7% Similarity=0.163 Sum_probs=71.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhCc--ccchhheecchhhHHHhhhhccccccccccCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lgl--~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
..+.||+.++|+.|+++|++++++||...+ .+..+..+++.+|+ .++|+.. ++. +.. .
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi-l~g--------------d~~--~-- 173 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI-FAG--------------DKP--G-- 173 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE-EcC--------------CCC--C--
Confidence 558999999999999999999999994211 24567777878999 7766543 222 110 0
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
||+ +. .+++.+++ +|||||+.+|+.+|++||+.
T Consensus 174 --------------------------K~~-------K~----------~~l~~~~i----~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 174 --------------------------QYT-------KT----------QWLKKKNI----RIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred --------------------------CCC-------HH----------HHHHhcCC----eEEEcCCHHHHHHHHHcCCc
Confidence 222 11 13456665 99999999999999999999
Q ss_pred EEEecCC
Q 019086 340 CVVMRSR 346 (346)
Q Consensus 340 ~i~v~~~ 346 (346)
+|.|.++
T Consensus 207 ~I~v~~G 213 (237)
T PRK11009 207 GIRILRA 213 (237)
T ss_pred EEEEecC
Confidence 9998764
No 80
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.8e-12 Score=121.58 Aligned_cols=228 Identities=14% Similarity=0.116 Sum_probs=133.4
Q ss_pred CCCceEEEEeccCccccccc-cccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCC-hHHHHHHHHHH-hCCCCCCCCh
Q 019086 81 PPRDLAVLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLVLFFNR-IGWPTSVPTN 157 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~-~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~-~g~~~~~~~~ 157 (346)
...+++++||+||||++... +.-...+.+.+++.|++. ++-..++. ..++....+.. .+.+...
T Consensus 5 ~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~----------iflTNn~~~s~~~~~~~L~~~~~~~~~~--- 71 (269)
T COG0647 5 MDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV----------IFLTNNSTRSREVVAARLSSLGGVDVTP--- 71 (269)
T ss_pred hhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE----------EEEeCCCCCCHHHHHHHHHhhcCCCCCH---
Confidence 34688999999999998554 222344555666788873 11111122 22223333333 3332211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 158 EKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
+.++.. ......|.........-..=|...+.+.|+..|+.+.-..+ . ....+--+|+++.+.+
T Consensus 72 --~~i~TS--~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~---~----~~~d~Vv~g~d~~~~~----- 135 (269)
T COG0647 72 --DDIVTS--GDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEE---P----ARVDAVVVGLDRTLTY----- 135 (269)
T ss_pred --HHeecH--HHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCC---C----CcccEEEEecCCCCCH-----
Confidence 011111 11111222111011122344666777788888776654333 1 1111112233322211
Q ss_pred hhHHHhhhhccccc-cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC
Q 019086 238 EEVERSLYGQFVLG-KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 316 (346)
Q Consensus 238 ~e~~~~~f~~i~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~ 316 (346)
+.....+..+..| ..+...+|-..+.+.+-.++++-..-+.+.+..++| ..++||++. .|+.+++.++.+
T Consensus 136 -e~l~~a~~~i~~g~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~-~~~GKP~~~-------i~~~al~~~~~~ 206 (269)
T COG0647 136 -EKLAEALLAIAAGAPFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP-TVIGKPSPA-------IYEAALEKLGLD 206 (269)
T ss_pred -HHHHHHHHHHHcCCcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc-cccCCCCHH-------HHHHHHHHhCCC
Confidence 1111123333333 334555666666667777888888889999999999 888887766 399999999999
Q ss_pred CCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 317 VRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 317 p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
.++++||||+. .||.+|+++||.+++|.++
T Consensus 207 ~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TG 237 (269)
T COG0647 207 RSEVLMVGDRLDTDILGAKAAGLDTLLVLTG 237 (269)
T ss_pred cccEEEEcCCchhhHHHHHHcCCCEEEEccC
Confidence 99999999997 7999999999999999874
No 81
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.31 E-value=4.3e-12 Score=120.84 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=88.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcch
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
...++||+.++|+.|+++|++++++|| ......+..++.+++.. +|+.. ++.+....
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~---r~~~~~~~~l~~l~~~~~~f~~i-~~~~~~~~------------------ 242 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSG---RDGVCEEDTVEWLRQTDIWFDDL-IGRPPDMH------------------ 242 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeC---CChhhHHHHHHHHHHcCCchhhh-hCCcchhh------------------
Confidence 456899999999999999999999999 66788999999999986 77653 22221100
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv-~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
+......+||+|.+ ++.++++++. ++++|++|||+.+|+.+|+++||.
T Consensus 243 -----------------~~~~~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 243 -----------------FQREQGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred -----------------hcccCCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 00000123777777 9999999988 679999999999999999999999
Q ss_pred EEEecCC
Q 019086 340 CVVMRSR 346 (346)
Q Consensus 340 ~i~v~~~ 346 (346)
+|+|.++
T Consensus 292 ~i~v~~g 298 (300)
T PHA02530 292 CWQVAPG 298 (300)
T ss_pred EEEecCC
Confidence 9999875
No 82
>PRK10444 UMP phosphatase; Provisional
Probab=99.31 E-value=3.6e-11 Score=112.15 Aligned_cols=41 Identities=10% Similarity=0.243 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++.+++++++|+||||+. .||.+|+++|+.+++|.++
T Consensus 180 ~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G 221 (248)
T PRK10444 180 IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 221 (248)
T ss_pred HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCC
Confidence 9999999999999999999997 8999999999999999864
No 83
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.27 E-value=3.5e-11 Score=111.52 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=71.6
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHH
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 265 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~ 265 (346)
+|++.++++.++++|+++ |+||. +.......+..+|...++.... . ..++.+.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~---d~~~~~~~~~~~~~g~~~~~i~------------~-~g~~~~~---------- 192 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANP---DRGINQHGIYRYGAGYYAELIK------------Q-LGGKVIY---------- 192 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECC---CEeccCCCceEecccHHHHHHH------------H-hCCcEec----------
Confidence 689999999998899997 88993 3444444445555544433210 0 1111111
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCC-hhhHHHHHHcCCCEEEe
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~-p~e~i~VGDs-~~Di~aA~~aG~~~i~v 343 (346)
..||+|.+ |+.+++++|.. +++|+||||+ .+||.+|+++||.+++|
T Consensus 193 ------------------~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 193 ------------------SGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred ------------------CCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 12677666 99999999975 6799999999 59999999999999998
Q ss_pred cC
Q 019086 344 RS 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 241 ~t 242 (242)
T TIGR01459 241 LT 242 (242)
T ss_pred eC
Confidence 75
No 84
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.25 E-value=2.2e-10 Score=106.86 Aligned_cols=41 Identities=5% Similarity=0.207 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.+++.+++++++++||||+. .||.+|+++||++|+|.++
T Consensus 184 ~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G 225 (249)
T TIGR01457 184 MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTG 225 (249)
T ss_pred HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCC
Confidence 9999999999999999999997 8999999999999999764
No 85
>PRK08238 hypothetical protein; Validated
Probab=99.24 E-value=1.8e-10 Score=116.73 Aligned_cols=94 Identities=19% Similarity=0.178 Sum_probs=68.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.++.+||+.++|++++++|++++++|+ +++..++.+++++|+ |+. +++.++...
T Consensus 70 ~lp~~pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl---Fd~-Vigsd~~~~------------------- 123 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL---FDG-VFASDGTTN------------------- 123 (479)
T ss_pred hCCCChhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC---CCE-EEeCCCccc-------------------
Confidence 356889999999999999999999999 778999999999997 443 333322111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.||+++ .+.+.+.++ .++++++||+.+|+.+++.+|-..+
T Consensus 124 ------------------------------~kg~~K--------~~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~~av~ 163 (479)
T PRK08238 124 ------------------------------LKGAAK--------AAALVEAFG--ERGFDYAGNSAADLPVWAAARRAIV 163 (479)
T ss_pred ------------------------------cCCchH--------HHHHHHHhC--ccCeeEecCCHHHHHHHHhCCCeEE
Confidence 122222 233445555 3669999999999999999994443
No 86
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.23 E-value=2.4e-11 Score=118.48 Aligned_cols=108 Identities=14% Similarity=0.182 Sum_probs=79.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCC---CC---------chhHHHHHHHHhCcccchhheecchhhHHHhhhhcccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 250 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~---~~---------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~ 250 (346)
..++||+.++|++|+++|++++|+||.. .+ .......+++.+|+. |+..+++.. ..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~----------~~ 96 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPH----------FP 96 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCC----------cC
Confidence 4599999999999999999999999931 00 123455566777773 333222210 00
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 019086 251 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 251 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
.+.. ..+||+|.+ +..+++.+++++++++||||+.+|+
T Consensus 97 sd~~----------------------------~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs~sDi 134 (354)
T PRK05446 97 EDNC----------------------------SCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDRETDV 134 (354)
T ss_pred cccC----------------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHH
Confidence 0111 123788777 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEec
Q 019086 331 AGAQRIGMPCVVMR 344 (346)
Q Consensus 331 ~aA~~aG~~~i~v~ 344 (346)
.+|+++||.+|++.
T Consensus 135 ~aAk~aGi~~I~v~ 148 (354)
T PRK05446 135 QLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHCCCeEEEEE
Confidence 99999999999984
No 87
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.20 E-value=4.6e-11 Score=115.36 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=76.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH----hCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~----lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
++||+.++|..|+++|++++|+|+ +....+..++++ +++.++|+....+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 578999999999999999999999 778889999998 8888877653211
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
.||+|+. ++.+++++|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 0555555 9999999999999999999999999999997753
No 88
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.20 E-value=7.1e-10 Score=104.54 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=79.8
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcch
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 260 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~ 260 (346)
..+++.||+.++++.|+++|++++|+|+ +....++.+++.+|+.+.+. .++++.- ....+++..|
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~~~-~IvSN~L--------~f~~dGvltG--- 182 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHPNV-KVVSNFM--------DFDEDGVLKG--- 182 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCcCc-eEEeeeE--------EECCCCeEeC---
Confidence 4688999999999999999999999999 78899999999999864442 2433311 0112334444
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHHHc
Q 019086 261 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~~Di~aA~~a 336 (346)
||.|-|-.-.+ ... +++.+++.++ .++++||+|||+.+|+.||.-+
T Consensus 183 -------------------------~~~P~i~~~~K--~~~---v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 183 -------------------------FKGPLIHTFNK--NHD---VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred -------------------------CCCCccccccc--HHH---HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 45553311111 111 2667888998 8999999999999999998765
No 89
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.17 E-value=4.3e-10 Score=105.12 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 203 ~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 203 RLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred HHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 38999999999999999999999999999999986543
No 90
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.16 E-value=1.9e-11 Score=105.10 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc-hhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~-f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
..++||+.++|+.|+ ++++++|+|+ +....++.+++++++..+ |+. +++.++ +..+
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts---~~~~~~~~il~~l~~~~~~f~~-i~~~~d--------------~~~~---- 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTA---GLRMYADPVLDLLDPKKYFGYR-RLFRDE--------------CVFV---- 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeC---CcHHHHHHHHHHhCcCCCEeee-EEECcc--------------cccc----
Confidence 458999999999999 5799999999 778999999999999653 344 233322 2111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
||+ |..+++++|++|++||+|||+..|+.++.++|+.+
T Consensus 101 ------------------------KP~-----------------~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 ------------------------KGK-----------------YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred ------------------------CCe-----------------EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 443 45678999999999999999999999999999875
No 91
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.15 E-value=5e-11 Score=104.66 Aligned_cols=101 Identities=16% Similarity=0.291 Sum_probs=68.6
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc----------cchhheecchhhHHHhhhhccccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 251 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~----------~~f~~~i~~~~e~~~~~f~~i~~g 251 (346)
.+.++|++.+.|.+|+++|++++++|.. +..+.++.+|+.+++. ++|+..
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~------------------ 102 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYL------------------ 102 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEE------------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchh------------------
Confidence 3669999999999999999999999963 3457899999999999 544432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 252 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
+|+..++. +=|+.+.+..|++.++++||+|-..++.
T Consensus 103 --------------------------------------eI~~gsK~------~Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 103 --------------------------------------EIYPGSKT------THFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp --------------------------------------EESSS-HH------HHHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred --------------------------------------heecCchH------HHHHHHHHhcCCChhHEEEecCchhcce
Confidence 11111111 1188889999999999999999999999
Q ss_pred HHHHcCCCEEEecCC
Q 019086 332 GAQRIGMPCVVMRSR 346 (346)
Q Consensus 332 aA~~aG~~~i~v~~~ 346 (346)
..+..|..+|.|+++
T Consensus 139 ~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHTTT-EEEE-SSS
T ss_pred eeEecCcEEEEeCCC
Confidence 999999999999874
No 92
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.14 E-value=8.1e-11 Score=103.59 Aligned_cols=83 Identities=16% Similarity=0.090 Sum_probs=72.2
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|..|+++|++++|+|| +....++..++.+|+..+|+..
T Consensus 42 ~~~~L~~~Gi~laIiT~---k~~~~~~~~l~~lgi~~~f~~~-------------------------------------- 80 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITS---KKSGAVRHRAEELKIKRFHEGI-------------------------------------- 80 (169)
T ss_pred HHHHHHHCCCEEEEEEC---CCcHHHHHHHHHCCCcEEEecC--------------------------------------
Confidence 35678899999999999 7789999999999999876531
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEe
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v 343 (346)
||+|+. ++.+++++|+++++|++|||+.+|+.|++.+|+..++-
T Consensus 81 --------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 81 --------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred --------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 555555 99999999999999999999999999999999987753
No 93
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.14 E-value=7.5e-11 Score=99.02 Aligned_cols=87 Identities=8% Similarity=0.012 Sum_probs=69.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCC-chhHHHHHHHHhC-------cccchhheecchhhHHHhhhhcccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 256 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~-~~~~~~~~l~~lg-------l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~ 256 (346)
++||+.++|+.|+++|++++|+|| + ....+...++.++ +.++|+..+ .+.
T Consensus 30 ~~~gv~e~L~~Lk~~g~~l~i~Sn---~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~---------------~~~---- 87 (128)
T TIGR01681 30 TIKEIRDKLQTLKKNGFLLALASY---NDDPHVAYELLKIFEDFGIIFPLAEYFDPLT---------------IGY---- 87 (128)
T ss_pred HHHHHHHHHHHHHHCCeEEEEEeC---CCCHHHHHHHHHhccccccchhhHhhhhhhh---------------hcC----
Confidence 789999999999999999999999 5 6777888888887 555555432 111
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHH
Q 019086 257 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 334 (346)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg--v~p~e~i~VGDs~~Di~aA~ 334 (346)
.||+|.+ |..+++++| ++|++|+||||+..|+...+
T Consensus 88 ----------------------------~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 88 ----------------------------WLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ----------------------------CCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 1455555 999999999 99999999999999988766
Q ss_pred H
Q 019086 335 R 335 (346)
Q Consensus 335 ~ 335 (346)
.
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.09 E-value=2.7e-09 Score=97.07 Aligned_cols=108 Identities=12% Similarity=0.033 Sum_probs=71.3
Q ss_pred CCCCcHHHHHH-HHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchh-hHHHhhhhccccccccccCcchh
Q 019086 184 PLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 184 ~~~pgv~elL~-~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~-e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.++||+.++|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++. .+..+.|. +.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~le~~---~gg~~~g~------~c- 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQIERG---NGGWVLPL------RC- 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEEeEEe---CCceEcCc------cC-
Confidence 47999999996 78889999999999 77899999998866533222 22221 110 11111111 00
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+.|| ...+.+.+|.+.+.+.+.|||.+|+.|.+.+|-+.+
T Consensus 159 --------~g~~K-------------------------------v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~ 199 (210)
T TIGR01545 159 --------LGHEK-------------------------------VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWR 199 (210)
T ss_pred --------CChHH-------------------------------HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEE
Confidence 11122 333334446566789999999999999999999988
Q ss_pred EecC
Q 019086 342 VMRS 345 (346)
Q Consensus 342 ~v~~ 345 (346)
+-++
T Consensus 200 Vnp~ 203 (210)
T TIGR01545 200 VSKR 203 (210)
T ss_pred ECcc
Confidence 7554
No 95
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.07 E-value=3.4e-10 Score=115.56 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=72.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCC---------chhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 255 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~---------~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~ 255 (346)
++||+.+.|..|+++|++++|+||...- ....+..+++.+|+. |+. +++.++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdv-iia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQV-FIAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEE-EEeCCCC---------------
Confidence 6899999999999999999999995320 013467788888875 443 2222110
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCChhhHH
Q 019086 256 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs~~Di~ 331 (346)
..+||+|++ +..+++.++ +++++++||||+..|+.
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 234888888 999999884 89999999999999998
Q ss_pred HHHHcCCC
Q 019086 332 GAQRIGMP 339 (346)
Q Consensus 332 aA~~aG~~ 339 (346)
+|+++|..
T Consensus 299 ~g~~ag~~ 306 (526)
T TIGR01663 299 NGKAAGKK 306 (526)
T ss_pred HHHhcCCC
Confidence 88887753
No 96
>PTZ00445 p36-lilke protein; Provisional
Probab=99.05 E-value=7.3e-10 Score=99.65 Aligned_cols=52 Identities=6% Similarity=-0.056 Sum_probs=46.7
Q ss_pred HHhhccccccCCCCCchhHHHHHHH--HHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 282 ASMLKLSVDIDTSSPESLDKIVAAL--RAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 282 ~~~~KP~p~i~~p~~~~~~~~~~~~--~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++.||+|.| + .| +.++++.|+.|++|+||+|...++++|+++||.++.+++
T Consensus 153 ~gl~KPdp~i----K--------~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 153 LGLDAPMPLD----K--------SYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred hcccCCCccc----h--------HHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 4667999998 2 27 999999999999999999999999999999999999875
No 97
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=99.02 E-value=2.6e-09 Score=103.33 Aligned_cols=71 Identities=11% Similarity=0.177 Sum_probs=51.2
Q ss_pred HhhHHHHHHHHHHH----Hhhcccc-ccCCCCCchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hh
Q 019086 269 AVSAQKQEIAEEVA----SMLKLSV-DIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SG 329 (346)
Q Consensus 269 ~~~~~~~~~~~~~~----~~~KP~p-~i~~p~~~~~~~~~~~~~~~~e~l--------gv-----~p~e~i~VGDs~-~D 329 (346)
.++.+-..-+.+.+ ..+.|.+ .++||++.. |+.+++.+ ++ ++++++||||+. .|
T Consensus 204 ~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~-------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tD 276 (321)
T TIGR01456 204 RFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLT-------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASD 276 (321)
T ss_pred eechHHHHHHHHHHHHHhcCCCcceEEcCCCChHH-------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhh
Confidence 45566655555553 3334443 458888774 67666666 43 457999999998 89
Q ss_pred HHHHHHcCCCEEEecCC
Q 019086 330 VAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~~ 346 (346)
|.+|+++||.+|+|+++
T Consensus 277 I~ga~~~G~~silV~tG 293 (321)
T TIGR01456 277 IIGAQNYGWFSCLVKTG 293 (321)
T ss_pred hhhHHhCCceEEEeccc
Confidence 99999999999999864
No 98
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.00 E-value=1.1e-08 Score=94.36 Aligned_cols=115 Identities=14% Similarity=0.239 Sum_probs=72.2
Q ss_pred EEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhCCCCCCCChhHHHHHHH
Q 019086 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIGWPTSVPTNEKKAFVKN 165 (346)
Q Consensus 86 ~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 165 (346)
.|+||+|+||+|.... ..+++.++.. .+..+.. ..... +....++...+..+...
T Consensus 2 LvvfDFD~TIvd~dsd------~~v~~~l~~~--~~~~~l~-~~~~~--~~wt~~m~~vl~~L~~~-------------- 56 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD------DWVIELLPPE--ELPEELR-ESYPK--GGWTEYMDRVLQLLHEQ-------------- 56 (234)
T ss_pred EEEEeCCCCccCCccH------HHHHHhcCCc--ccHHHHH-Hhccc--cchHHHHHHHHHHHHHc--------------
Confidence 6899999999998875 3345555544 1222222 22211 22223323333222110
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHH--HhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 166 VLQEKKNALDEFLASKDAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L--~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
....+.+.+.+ +..++.||+.++++.+ +..|+.+.|+|. +...+.+.++++.|+...|+-
T Consensus 57 --gvt~~~I~~~l--~~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~ 118 (234)
T PF06888_consen 57 --GVTPEDIRDAL--RSIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSE 118 (234)
T ss_pred --CCCHHHHHHHH--HcCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccce
Confidence 01112223333 3478999999999999 567999999999 778999999999999988765
No 99
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.97 E-value=5.1e-09 Score=96.84 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCCCcE-EEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~-i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
|+.++++++++++++ +||||+. .||.+|+++||.+|+|.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 999999999999887 9999998 8999999999999999875
No 100
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.94 E-value=1.8e-09 Score=96.16 Aligned_cols=81 Identities=11% Similarity=0.121 Sum_probs=66.9
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhh
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 271 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~ 271 (346)
.|+.|+++|++++|+|| .....+..+++.+|+..+|.. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~---~~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITG---RKSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 55677889999999999 667889999999999876531 0
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
++.+. +++.+++++|+++++|+||||+.+|+.+++++|+.++
T Consensus 95 --------------~~k~~--------------~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 95 --------------SNKLI--------------AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred --------------CcHHH--------------HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 11112 2899999999999999999999999999999999954
No 101
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=98.93 E-value=6.9e-10 Score=84.34 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=44.9
Q ss_pred hccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEecCC
Q 019086 285 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 285 ~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs-~~Di~aA~~aG~~~i~v~~~ 346 (346)
+||+|.+ |+.+++++++++++|+||||+ ..||.+|+++||.+|+|.++
T Consensus 3 gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG 51 (75)
T PF13242_consen 3 GKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTG 51 (75)
T ss_dssp STTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred CCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence 4888888 999999999999999999999 79999999999999999874
No 102
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.88 E-value=1.4e-08 Score=88.96 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHHHHHHcCC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEecCC
Q 019086 306 LRAGAEYAEK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~lgv-----~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~~ 346 (346)
++.+++.++. .|+|+++|||.. .||.+|..+|+.+|+|+.+
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 5666666654 499999999997 8999999999999999864
No 103
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.85 E-value=2.3e-09 Score=97.90 Aligned_cols=38 Identities=18% Similarity=0.130 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 161 al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 198 (230)
T PRK01158 161 GLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV 198 (230)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe
Confidence 48999999999999999999999999999999998765
No 104
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.84 E-value=5.6e-09 Score=94.87 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||+.|++.+|+..++
T Consensus 153 ~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 190 (225)
T TIGR01482 153 AVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV 190 (225)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc
Confidence 38899999999999999999999999999999998654
No 105
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.82 E-value=2.6e-08 Score=87.86 Aligned_cols=39 Identities=23% Similarity=0.582 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCc
Confidence 6666999999999999999999 78999999999999986
No 106
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.80 E-value=1.8e-08 Score=97.89 Aligned_cols=130 Identities=12% Similarity=0.065 Sum_probs=87.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-C-------cccchhheecchhhHHHhhhhcccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 254 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-g-------l~~~f~~~i~~~~e~~~~~f~~i~~g~~v 254 (346)
+...||+.++|+.|+++|++++|+|| +....+..+++.+ | +.++|+.+|.+... .++|+.-..=..|
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTN---S~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~K--P~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTN---SDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARK--PGFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCC--CcccCCCCceEEE
Confidence 55799999999999999999999999 6789999999996 7 88999986655432 2344421000111
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcccccc-CCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHH
Q 019086 255 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDI-DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAG 332 (346)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i-~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~a 332 (346)
.... ...|+.... .+|......+= +....+.+|+.++++++|||+. .||.+
T Consensus 258 ~~~~------------------------g~~~~~~~~~l~~g~vY~gGn---~~~~~~~l~~~~~~vlYvGD~i~~Di~~ 310 (343)
T TIGR02244 258 DVET------------------------GSLKWGEVDGLEPGKVYSGGS---LKQFHELLKWRGKEVLYFGDHIYGDLLR 310 (343)
T ss_pred eCCC------------------------CcccCCccccccCCCeEeCCC---HHHHHHHHCCCCCcEEEECCcchHHHHh
Confidence 1000 000111110 11111111111 6778889999999999999997 79999
Q ss_pred HH-HcCCCEEEec
Q 019086 333 AQ-RIGMPCVVMR 344 (346)
Q Consensus 333 A~-~aG~~~i~v~ 344 (346)
++ .+||.||+|-
T Consensus 311 ~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 311 SKKKRGWRTAAII 323 (343)
T ss_pred hHHhcCcEEEEEc
Confidence 98 9999999874
No 107
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.79 E-value=5.2e-08 Score=91.69 Aligned_cols=48 Identities=15% Similarity=0.277 Sum_probs=38.0
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
...+.||+.++|+.|+++|++++++||............+.++|+...
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~ 163 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQA 163 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCC
Confidence 356899999999999999999999999543334445577788888753
No 108
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.78 E-value=6.9e-08 Score=90.99 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p-~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|+++ +++++|||+.||++|++.+|+.+++
T Consensus 194 al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam 232 (273)
T PRK00192 194 AVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV 232 (273)
T ss_pred HHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe
Confidence 4889999999999 9999999999999999999998775
No 109
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.75 E-value=5.8e-09 Score=97.98 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 229 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM 229 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec
Confidence 59999999999999999999999999999999987654
No 110
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.74 E-value=4.2e-08 Score=92.22 Aligned_cols=155 Identities=15% Similarity=0.037 Sum_probs=96.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH-------hhhhccccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER-------SLYGQFVLGKGIS 255 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~-------~~f~~i~~g~~v~ 255 (346)
.....|...+-++|++.|++.......+. .+......+...++++-...++++.++... ..|-+=.....+.
T Consensus 108 ~Vyvig~~gi~~eL~~aG~~~~g~~~~~~-~~~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL~kA~~yLqnP~clfla 186 (306)
T KOG2882|consen 108 KVYVIGEEGIREELDEAGFEYFGGGPDGK-DTDGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKLMKALNYLQNPGCLFLA 186 (306)
T ss_pred eEEEecchhhhHHHHHcCceeecCCCCcc-cccccccchhhcCCCCCCCEEEEecccccCHHHHHHHHHHhCCCCcEEEe
Confidence 44568889999999999977766544211 111122334445555444444444432210 0011100111223
Q ss_pred cCcchhHH-HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHH
Q 019086 256 SGVDEQLA-TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGA 333 (346)
Q Consensus 256 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA 333 (346)
.+.|...+ .+.+-+++++--.=+.+.+..|+| ..++||++. .++.+.++.+++|++++||||+. .||.-+
T Consensus 187 tn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P-~v~GKP~~~-------m~~~l~~~~~i~psRt~mvGDRL~TDIlFG 258 (306)
T KOG2882|consen 187 TNRDATTPPTPGVEIPGAGSFVAAVKFATGRQP-IVLGKPSTF-------MFEYLLEKFNIDPSRTCMVGDRLDTDILFG 258 (306)
T ss_pred ccCccccCCCCCeeccCCccHHHHHHHHhcCCC-eecCCCCHH-------HHHHHHHHcCCCcceEEEEcccchhhhhHh
Confidence 33333222 222445666666667788899999 566788777 27888999999999999999998 599999
Q ss_pred HHcCCCEEEecCC
Q 019086 334 QRIGMPCVVMRSR 346 (346)
Q Consensus 334 ~~aG~~~i~v~~~ 346 (346)
++.|+.|++|.++
T Consensus 259 ~~~G~~TLLvltG 271 (306)
T KOG2882|consen 259 KNCGFKTLLVLSG 271 (306)
T ss_pred hccCcceEEEecC
Confidence 9999999998764
No 111
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.72 E-value=1.1e-08 Score=95.69 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 59999999999999999999999999999999997665
No 112
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.69 E-value=6e-09 Score=94.52 Aligned_cols=38 Identities=13% Similarity=0.105 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||++|++.+|+..++
T Consensus 151 ~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 151 GVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 38999999999999999999999999999999998765
No 113
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.69 E-value=3e-08 Score=87.85 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-------------hhHHHHHHHHhCcccchhheecchhhHHHhhhhccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFV 249 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-------------~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~ 249 (346)
+++.||+.+.+..|++.|++++++||.+ +- .......++..|. .++.+.+.. .
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQs-Gi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp-----------h 95 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQS-GIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP-----------H 95 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCC-CccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-----------C
Confidence 3488999999999999999999999942 10 0112222223332 111111111 1
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 019086 250 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 329 (346)
Q Consensus 250 ~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~D 329 (346)
..+.. -..|||.|.+ ++.++++.++++++.++|||...|
T Consensus 96 ~p~~~---------------------------c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~D 134 (181)
T COG0241 96 HPEDN---------------------------CDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTD 134 (181)
T ss_pred CCCCC---------------------------CcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHH
Confidence 11100 1456899988 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEecC
Q 019086 330 VAGAQRIGMPCVVMRS 345 (346)
Q Consensus 330 i~aA~~aG~~~i~v~~ 345 (346)
+++|.++|+..+.+..
T Consensus 135 lq~a~n~gi~~~~~~~ 150 (181)
T COG0241 135 LQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHCCCCceEEEc
Confidence 9999999999776643
No 114
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.67 E-value=2.7e-07 Score=80.85 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=70.5
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...++|++.+.|++.++.|+++.|.|. +.-....-.+ |-.+.-| ..++|+...+ ...|+
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSS---GSV~AQkL~F---ghs~agd---------L~~lfsGyfD---ttiG~--- 159 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSS---GSVKAQKLFF---GHSDAGD---------LNSLFSGYFD---TTIGK--- 159 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcC---CCchhHHHhh---ccccccc---------HHhhhcceee---ccccc---
Confidence 367899999999999999999999998 4434332222 2211111 1112222111 11121
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|-... .|..++...|++|.+++|+.|....+.+|+.+||.|+
T Consensus 160 ------------------------KrE~~--------------SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~ 201 (229)
T COG4229 160 ------------------------KRESQ--------------SYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATG 201 (229)
T ss_pred ------------------------cccch--------------hHHHHHHhcCCCchheEEecCCHHHHHHHHhcchhee
Confidence 11111 2999999999999999999999999999999999998
Q ss_pred Eec
Q 019086 342 VMR 344 (346)
Q Consensus 342 ~v~ 344 (346)
++.
T Consensus 202 l~~ 204 (229)
T COG4229 202 LAV 204 (229)
T ss_pred eee
Confidence 864
No 115
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.65 E-value=1.6e-06 Score=78.83 Aligned_cols=38 Identities=8% Similarity=-0.009 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 183 al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 183 AANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 38899999999999999999999999999999988764
No 116
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.65 E-value=1e-06 Score=79.53 Aligned_cols=120 Identities=18% Similarity=0.308 Sum_probs=75.3
Q ss_pred CceEEEEeccCccccccccccHHHHHHHHHHcCCCCCCCChHHHHHHHhhc-cCChHHHHHHHHHHhCCCCCCCChhHHH
Q 019086 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKS-AGDEDRMLVLFFNRIGWPTSVPTNEKKA 161 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~gi~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~ 161 (346)
+-..++||+|-||+|.... .-+.+.++.. +...++.... .|..-.++...+.+++ +..+..
T Consensus 12 ~ril~~FDFD~TIid~dSD------~wVv~~lp~~------~l~~qL~~t~p~~~Wne~M~rv~k~Lh-eqgv~~----- 73 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD------NWVVDELPTT------DLFNQLRDTYPKGFWNELMDRVFKELH-EQGVRI----- 73 (256)
T ss_pred CcEEEEEecCceeecCCcc------hHHHHhcccc------hhHHHHHHhcccchHHHHHHHHHHHHH-HcCCCH-----
Confidence 3448999999999998775 2233444444 2223333221 1223333333444443 222211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCC-CEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 162 FVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi-~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
++.. ..+ ..++..||+.++|..++..|. .+.|+|. .....++.+++.+|+.++|.. |++
T Consensus 74 ------~~ik----~~~--r~iP~~Pgmv~lik~~ak~g~~eliIVSD---aNsfFIe~~Lea~~~~d~F~~-IfT 133 (256)
T KOG3120|consen 74 ------AEIK----QVL--RSIPIVPGMVRLIKSAAKLGCFELIIVSD---ANSFFIEEILEAAGIHDLFSE-IFT 133 (256)
T ss_pred ------HHHH----HHH--hcCCCCccHHHHHHHHHhCCCceEEEEec---CchhHHHHHHHHccHHHHHHH-Hhc
Confidence 1111 111 247799999999999999986 9999998 668999999999999998874 344
No 117
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.63 E-value=4.5e-08 Score=91.50 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam 230 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM 230 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec
Confidence 48999999999999999999999999999999998765
No 118
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=3e-07 Score=80.67 Aligned_cols=55 Identities=33% Similarity=0.526 Sum_probs=45.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC-cccchhheecchhh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEE 239 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg-l~~~f~~~i~~~~e 239 (346)
...+.||.+++++.+++++++++|+|+ +.+.++..+++.++ -++.....+++++.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~ 126 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNND 126 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCc
Confidence 356999999999999999999999999 88999999999754 45555666666543
No 119
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.61 E-value=1.9e-07 Score=83.45 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=91.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc----chhh--------------eecchhhHHHhhhh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER----ISKI--------------KIVGNEEVERSLYG 246 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~----~f~~--------------~i~~~~e~~~~~f~ 246 (346)
..||..|.+..|+..+.+|-.+||........+...|.++|++- .|.- ..+--++...+.|+
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~d~a~~dF~ 103 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVDDDALEDFD 103 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEcccchhhCC
Confidence 67999999999999999999999987766777777888888641 1100 00001122223455
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHH----H---------------------------------HHHHHHhhcccc
Q 019086 247 QFVLGKGISSGVDEQLATEARKAVSAQKQE----I---------------------------------AEEVASMLKLSV 289 (346)
Q Consensus 247 ~i~~g~~v~~~~~~~~~~~~~~~~~~~~~~----~---------------------------------~~~~~~~~KP~p 289 (346)
+|-+. .++.--.+++.+.-+++..- + +.|-+... -..
T Consensus 104 gidTs-----~pn~VViglape~F~y~~ln~AFrvL~e~~k~~LIai~kgryykr~~Gl~lgpG~fv~aLeyatg~-~a~ 177 (262)
T KOG3040|consen 104 GIDTS-----DPNCVVIGLAPEGFSYQRLNRAFRVLLEMKKPLLIAIGKGRYYKRVDGLCLGPGPFVAALEYATGC-EAT 177 (262)
T ss_pred CccCC-----CCCeEEEecCcccccHHHHHHHHHHHHcCCCCeEEEecCceeeeeccccccCchHHHHHhhhccCc-eEE
Confidence 54221 11111111111111111110 0 11111111 122
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEecCC
Q 019086 290 DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 290 ~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~-Di~aA~~aG~~~i~v~~~ 346 (346)
.++||++.+ |+.+++.+|++|++|+||||-.+ |+-+|+++||+.|.|+++
T Consensus 178 vvGKP~~~f-------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 178 VVGKPSPFF-------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred EecCCCHHH-------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 345666665 88999999999999999999885 999999999999999864
No 120
>PRK10976 putative hydrolase; Provisional
Probab=98.55 E-value=9.7e-08 Score=89.25 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|++++++++|||+.||++|.+.+|...++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm 231 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM 231 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee
Confidence 59999999999999999999999999999999998765
No 121
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.48 E-value=4.3e-07 Score=84.47 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++.+|++++++++|||+.||+.|++.+|+.+++
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 49999999999999999999999999999999998765
No 122
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.45 E-value=7.3e-07 Score=83.95 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=35.6
Q ss_pred HHHHHHHHcCC---CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv---~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++++|+ ++++++.|||+.||++|.+.+|...++
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 59999999999 999999999999999999999988765
No 123
>PLN02887 hydrolase family protein
Probab=98.44 E-value=6.9e-08 Score=99.96 Aligned_cols=38 Identities=5% Similarity=0.016 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence 49999999999999999999999999999999997665
No 124
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.43 E-value=4.9e-07 Score=93.32 Aligned_cols=87 Identities=11% Similarity=0.137 Sum_probs=70.0
Q ss_pred CCCCCcHHHHHHHHHhCCC-CEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi-~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|++|+++|+ +++++|| .....++.+++++|++++|...
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~---------------------------- 409 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAEL---------------------------- 409 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhcc----------------------------
Confidence 4589999999999999999 9999999 7789999999999998765431
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 340 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~ 340 (346)
.|. + -..++++++...++++||||+.+|+.++++||+..
T Consensus 410 ------------------------~p~---------~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 410 ------------------------LPE---------D-------KLEIVKELREKYGPVAMVGDGINDAPALAAADVGI 448 (536)
T ss_pred ------------------------CcH---------H-------HHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEE
Confidence 010 0 11245556666789999999999999999999743
No 125
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.43 E-value=4.3e-07 Score=85.95 Aligned_cols=48 Identities=19% Similarity=0.252 Sum_probs=41.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 236 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~ 236 (346)
.||+.++|++|+++|++++|+|+ +.+..+...++.+|++.+|+..+.+
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvIIs~ 195 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDIIISG 195 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEEEEC
Confidence 38899999999999999999999 6678889999999999998764433
No 126
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.42 E-value=1e-06 Score=81.68 Aligned_cols=91 Identities=10% Similarity=0.176 Sum_probs=66.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHH--HHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR--SVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVD 259 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~--~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~ 259 (346)
..++||+.++|++|+++|++++++||+. +.... ..++++|+.. .|+.. ++.++....
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~---~~~~~~~~~L~~~gl~~~~~~~I-i~s~~~~~~---------------- 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSP---RNIFSLHKTLKSLGINADLPEMI-ISSGEIAVQ---------------- 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCC---CChHHHHHHHHHCCCCccccceE-EccHHHHHH----------------
Confidence 4579999999999999999999999953 34433 6889999987 77764 333322110
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 260 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
.+..+++++++++++|++|||+..|+.....+|.
T Consensus 83 ---------------------------------------------~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 ---------------------------------------------MILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ---------------------------------------------HHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 1555566777888888888888777776655554
No 127
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.39 E-value=7.6e-07 Score=92.31 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=68.9
Q ss_pred CCCCCcHHHHHHHHHhCC-CCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~G-i~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.+++||+.++|+.|+++| ++++++|| .....++.+++++|++++|... .
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~------------------------- 432 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--L------------------------- 432 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--C-------------------------
Confidence 568999999999999999 99999999 7789999999999998766431 0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
|+.++ ..+++++..+++|+||||+.+|+.++++||+.+.
T Consensus 433 ----------------------------------p~~K~-------~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 433 ----------------------------------PEDKL-------AIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred ----------------------------------HHHHH-------HHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 00001 1234444467899999999999999999996443
No 128
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.31 E-value=9.4e-07 Score=81.25 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=32.3
Q ss_pred HHHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv--~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++..++.+++ .++++++|||+.||+.|.+.+|+..++
T Consensus 185 al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 185 AIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred HHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 37777888765 677999999999999999999998653
No 129
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.31 E-value=2.6e-07 Score=80.73 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=75.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
...+||+.+||++|.+. ++++|.|+ +.+.+++.+++.+++.. +|+..++... ....
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts---~~~~yA~~il~~ldp~~~~f~~~l~r~~---------------~~~~---- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTA---SLEEYADPVLDILDRGGKVISRRLYRES---------------CVFT---- 97 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcC---CcHHHHHHHHHHHCcCCCEEeEEEEccc---------------cEEe----
Confidence 44899999999999988 99999999 77899999999999875 6665443221 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
||. |...+..+|.++++||+|||+..++.++...|+.+.
T Consensus 98 ------------------------~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 ------------------------NGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ------------------------CCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 111 334577889999999999999999999999998865
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
.
T Consensus 137 ~ 137 (162)
T TIGR02251 137 S 137 (162)
T ss_pred C
Confidence 4
No 130
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.23 E-value=1.8e-06 Score=89.67 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=39.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+++||+.++|++|+++|++++++|+ +....++.+++.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc
Confidence 45899999999999999999999999 7789999999999996
No 131
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.18 E-value=2.4e-05 Score=72.71 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=36.8
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
+++.+++.+|+++++|++|||+.||++|++.+|..++.+.+
T Consensus 171 al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 171 ALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 38999999999999999999999999999998877777654
No 132
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.14 E-value=1.5e-05 Score=83.26 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEE--cCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~V--GDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++.++++.| ||+.||+.|.+.+|...++
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 5899999999999999998 9999999999999998765
No 133
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.09 E-value=3.1e-05 Score=72.20 Aligned_cols=38 Identities=16% Similarity=0.209 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCC--CCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~--p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++ .+++++|||+.||+.|.+.+|...++
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 388999999999 99999999999999999999988775
No 134
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.08 E-value=9.3e-06 Score=88.13 Aligned_cols=89 Identities=11% Similarity=0.185 Sum_probs=70.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
.+++||+.+.|++|++.|++++++|+ .....++.+.+.+|+++++....
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~---------------------------- 697 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL---------------------------- 697 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC----------------------------
Confidence 36799999999999999999999999 67888999999999987543210
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
| +. -..++++++..+++++||||+.||+.++++||+...+
T Consensus 698 ------------------------p---------~~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 698 ------------------------P---------DG-------KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred ------------------------H---------HH-------HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 0 00 1124556677789999999999999999999995443
No 135
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.08 E-value=7.3e-06 Score=71.43 Aligned_cols=98 Identities=15% Similarity=0.214 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCch-----------hHHHHHHHHhCcccchhheecchhhHHHhhhhccccccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~-----------~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~ 253 (346)
..|++.+.|.+|.++|++|+|+||.+--.. ..+..+++.+++.-. .+++.. .
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~~---~~~a~~-------------~- 92 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPIQ---VYAAPH-------------K- 92 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-EE---EEECGC-------------S-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCceE---EEecCC-------------C-
Confidence 456899999999999999999999631111 223344444544411 011110 0
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCC---
Q 019086 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGS--- 326 (346)
Q Consensus 254 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lg----v~p~e~i~VGDs--- 326 (346)
-..|||.+++ ++.+++.+. ++.++++||||.
T Consensus 93 ----------------------------d~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 93 ----------------------------DPCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------------------STTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------------------CCCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 0356999999 888888876 488999999996
Q ss_pred --------hhhHHHHHHcCCCEE
Q 019086 327 --------QSGVAGAQRIGMPCV 341 (346)
Q Consensus 327 --------~~Di~aA~~aG~~~i 341 (346)
..|..-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 579999999999853
No 136
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.07 E-value=8.3e-06 Score=77.39 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=42.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.|++.++|++|+++|++++|+|| +.+..+...++.+|+..+|+..+.++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTN---g~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSY---GNREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHHcCCCccccEEEECC
Confidence 37888999999999999999999 66788999999999999998754444
No 137
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.06 E-value=5.6e-05 Score=69.64 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=36.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++.|++.++++.|+++|++|.++|+.....+.....-|...|+..
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~ 164 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG 164 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC
Confidence 346799999999999999999999999943222233555666777764
No 138
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.05 E-value=4.8e-05 Score=71.21 Aligned_cols=115 Identities=17% Similarity=0.270 Sum_probs=76.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--c-hhh-------eecchhhHHHhhhhccccccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--I-SKI-------KIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~-f~~-------~i~~~~e~~~~~f~~i~~g~~ 253 (346)
...+.+.++|..|.++|++|..+|..+.+.+......|..+|++- . +.. ...........++.++....+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 367899999999999999999999977666677777778888861 1 100 001111112222333333333
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH-
Q 019086 254 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG- 332 (346)
Q Consensus 254 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~a- 332 (346)
..+| .++...++++|..|+.+|||+|+..++..
T Consensus 161 ~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 161 QDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLKSV 194 (252)
T ss_pred CccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHHHH
Confidence 3222 13899999999999999999999876654
Q ss_pred ---HHHcCCCEEEec
Q 019086 333 ---AQRIGMPCVVMR 344 (346)
Q Consensus 333 ---A~~aG~~~i~v~ 344 (346)
.+..|+..+++.
T Consensus 195 ~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 195 EKACKKSGIDFIGFH 209 (252)
T ss_pred HHHHhhCCCcEEEEE
Confidence 345677766653
No 139
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.00 E-value=1.1e-05 Score=74.42 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=37.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
.++.||+.+|+..++++|++|.++||.....+.....-|.+.|...
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~ 159 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPG 159 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTST
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCc
Confidence 4689999999999999999999999965554566666777888653
No 140
>PLN02382 probable sucrose-phosphatase
Probab=97.97 E-value=2.3e-05 Score=78.45 Aligned_cols=40 Identities=15% Similarity=-0.034 Sum_probs=35.0
Q ss_pred HHHHHHHHc---CCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 305 ALRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 305 ~~~~~~e~l---gv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|++.+++++ |+++++++++||+.||++|.+.+|...|.+.
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~ 221 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS 221 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc
Confidence 488889998 9999999999999999999999996555544
No 141
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.95 E-value=2e-05 Score=67.67 Aligned_cols=81 Identities=12% Similarity=0.198 Sum_probs=67.1
Q ss_pred HHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHHhhH
Q 019086 193 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 272 (346)
Q Consensus 193 L~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~~~~ 272 (346)
|..|.+.|++++|+|+ .....++...+.||+..++-.. .+
T Consensus 44 ik~l~~~Gi~vAIITG---r~s~ive~Ra~~LGI~~~~qG~----~d--------------------------------- 83 (170)
T COG1778 44 IKLLLKSGIKVAIITG---RDSPIVEKRAKDLGIKHLYQGI----SD--------------------------------- 83 (170)
T ss_pred HHHHHHcCCeEEEEeC---CCCHHHHHHHHHcCCceeeech----Hh---------------------------------
Confidence 4577888999999999 5678999999999999754221 00
Q ss_pred HHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 273 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 273 ~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
..++|+..++++++.++||.+|||-.+|+.+.+.+|++...
T Consensus 84 -----------------------------K~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 84 -----------------------------KLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred -----------------------------HHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 11259999999999999999999999999999999998653
No 142
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.86 E-value=0.00074 Score=69.11 Aligned_cols=100 Identities=18% Similarity=0.203 Sum_probs=63.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchh-hH-HHhhhhccccccccccCcchh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~-e~-~~~~f~~i~~g~~v~~~~~~~ 261 (346)
++|.+.+. ++++|. ++|+|. +++.+++.+.+. +|++.. ++.+ ++ ..++|++.+.|.+...|
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~G---- 174 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVG---- 174 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCcc----
Confidence 55665554 456774 499999 778999999975 899863 3332 22 24455555554322222
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+| ...+.+.+|.+... ++.|||.+|..+.+.++-..+
T Consensus 175 ----------e~K-------------------------------v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 175 ----------DHK-------------------------------RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred ----------HHH-------------------------------HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 111 23333556644344 899999999999999997765
Q ss_pred E
Q 019086 342 V 342 (346)
Q Consensus 342 ~ 342 (346)
+
T Consensus 213 V 213 (497)
T PLN02177 213 V 213 (497)
T ss_pred e
Confidence 5
No 143
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.86 E-value=5e-05 Score=81.40 Aligned_cols=42 Identities=24% Similarity=0.354 Sum_probs=39.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++||+.+.|++|++.|++++++|+ .....++.+.+.+|++.
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~ 609 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDF 609 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCe
Confidence 6899999999999999999999999 77899999999999974
No 144
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.79 E-value=5.5e-05 Score=67.52 Aligned_cols=29 Identities=21% Similarity=0.427 Sum_probs=22.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG 210 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~ 210 (346)
.+++.||+.|.|++|.+.|..++++|...
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 46799999999999999998888888743
No 145
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.75 E-value=0.00034 Score=60.80 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=29.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 223 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~ 223 (346)
..|++.++++.++++|++++++|+...+.....+..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 468999999999999999999999543222233456655
No 146
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.74 E-value=7e-05 Score=81.85 Aligned_cols=114 Identities=22% Similarity=0.307 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHH
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 263 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~ 263 (346)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+...++.. +++.+.. .-.++.+.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~-v~g~~l~--------------~~~~~~l~ 589 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQS-VSGEKLD--------------AMDDQQLS 589 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCce-eEhHHhH--------------hCCHHHHH
Confidence 6799999999999999999999999 7789999999999998654432 2222211 11111100
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 264 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
.+. +-..-....+|+.+-.+ .+.++-..+.+.|+||+.||+.|.++|++...
T Consensus 590 ------------~~~-------~~~~Vfar~~P~~K~~i-------v~~lq~~g~~v~mvGDGvND~pAl~~AdVGia 641 (884)
T TIGR01522 590 ------------QIV-------PKVAVFARASPEHKMKI-------VKALQKRGDVVAMTGDGVNDAPALKLADIGVA 641 (884)
T ss_pred ------------HHh-------hcCeEEEECCHHHHHHH-------HHHHHHCCCEEEEECCCcccHHHHHhCCeeEe
Confidence 000 00111122333333333 23333335889999999999999999997544
No 147
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.68 E-value=0.00011 Score=69.95 Aligned_cols=37 Identities=11% Similarity=-0.018 Sum_probs=27.5
Q ss_pred HHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 306 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 306 ~~~~~e~lgv--~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
.+...+.+.- .+=.+|.+|||.||+.|.+.+....|+
T Consensus 213 ~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 213 VQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred HHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 4444444433 344799999999999999999988775
No 148
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.68 E-value=0.00013 Score=61.00 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=44.1
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
.+.++|.+++++.++|+.|+-+..+|= |...-+-..+..+++..||+..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 366999999999999999998888886 77888888999999999998864
No 149
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.67 E-value=0.00048 Score=64.80 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=35.1
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++.|++.+|.+.++++|++|.++||.....+.....-|.+.|+..
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 456789999999999999999999999953322333444455566653
No 150
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.56 E-value=0.00014 Score=76.77 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=40.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++|++.|++++++|+ .....+..+.+.+|+++++
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~ 489 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFI 489 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEE
Confidence 6899999999999999999999999 7789999999999998643
No 151
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.00034 Score=74.24 Aligned_cols=45 Identities=24% Similarity=0.489 Sum_probs=41.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
-+++|++.+.|++|++.|++++++|+ ..+..++.+.+.+|+++++
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~ 580 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVR 580 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhe
Confidence 45899999999999999999999999 7789999999999998754
No 152
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.41 E-value=0.0058 Score=55.85 Aligned_cols=103 Identities=11% Similarity=0.188 Sum_probs=71.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
...++++...++..+++|+++.|.|. +.......+..+-+-.+. .+-..++|+--+ |.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSS---gsv~AqKllfg~s~~gdl--------~~y~~gyfDt~i-G~---------- 179 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSS---GSVAAQKLLFGYSDAGDL--------RKYISGYFDTTI-GL---------- 179 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcC---CcHHHHHHHHcccCcchH--------HHHhhhhhhccc-cc----------
Confidence 36799999999999999999999998 544444444433221111 112222333311 11
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|-.-. .|..+.+.+|.++.|.+|+-|-..-..+|+.+|+.+.+
T Consensus 180 -----------------------K~e~~--------------sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l 222 (254)
T KOG2630|consen 180 -----------------------KVESQ--------------SYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGL 222 (254)
T ss_pred -----------------------eehhH--------------HHHHHHHHhCCChhheEEeccChHHHHHHHhcccceee
Confidence 11112 29999999999999999999999999999999999877
Q ss_pred ec
Q 019086 343 MR 344 (346)
Q Consensus 343 v~ 344 (346)
+.
T Consensus 223 ~~ 224 (254)
T KOG2630|consen 223 VS 224 (254)
T ss_pred ee
Confidence 54
No 153
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.41 E-value=0.00033 Score=74.11 Aligned_cols=44 Identities=16% Similarity=0.334 Sum_probs=40.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++||+.|+++.++|+ .....+..+.+.+|++++|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~ 484 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFV 484 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEE
Confidence 5899999999999999999999999 7788999999999998754
No 154
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.36 E-value=0.00039 Score=73.64 Aligned_cols=44 Identities=16% Similarity=0.363 Sum_probs=40.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
+++||+.+.+++||+.|++++++|+ .....+..+.+.+|+++++
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~ 488 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFL 488 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEE
Confidence 4689999999999999999999999 7788999999999998743
No 155
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.36 E-value=0.0015 Score=61.47 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=30.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|+..+++++|||..+|+.|.+.+
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 48999999999999999999999999999988
No 156
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.34 E-value=0.00061 Score=74.84 Aligned_cols=42 Identities=26% Similarity=0.523 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 5899999999999999999999999 66788999999999963
No 157
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.28 E-value=0.0005 Score=69.39 Aligned_cols=128 Identities=10% Similarity=0.068 Sum_probs=72.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh-C--------cccchhheecchhhHHHhhhhccccccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G--------SERISKIKIVGNEEVERSLYGQFVLGKG 253 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l-g--------l~~~f~~~i~~~~e~~~~~f~~i~~g~~ 253 (346)
+...|.+..+|+.||++|.++-++|| ++-.++..+++.+ | +.++||++|+..... ++|..-..=..
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP--~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKP--GFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CC--HHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCC--cccCCCCceEE
Confidence 34568999999999999999999999 5668888888853 3 457888887765422 23432110011
Q ss_pred c--ccCcchhHHHHHHHHhhHHHHHHHHHHHHhhcccc--ccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-h
Q 019086 254 I--SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV--DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-S 328 (346)
Q Consensus 254 v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p--~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~ 328 (346)
| ..|.. +... .-.++......+= .....+.+|....++++|||+. .
T Consensus 257 vd~~~g~l--------------------------~~~~~~~~l~~g~vY~gGn---~~~l~~ll~~~g~~VLY~GDhi~~ 307 (448)
T PF05761_consen 257 VDTETGKL--------------------------KWGKYVGPLEKGKVYSGGN---WDQLHKLLGWRGKEVLYFGDHIYG 307 (448)
T ss_dssp EETTTSSE--------------------------ECS---SS--TC-EEEE-----HHHHHHHCT--GGGEEEEESSTTT
T ss_pred EECCCCcc--------------------------ccccccccccCCCEeecCC---HHHHHHHHccCCCeEEEECCchhh
Confidence 1 01100 0000 0001111112222 5677788999999999999998 7
Q ss_pred hHHHHHHc-CCCEEEec
Q 019086 329 GVAGAQRI-GMPCVVMR 344 (346)
Q Consensus 329 Di~aA~~a-G~~~i~v~ 344 (346)
||...+.. ||+|+.|-
T Consensus 308 Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 308 DILKSKKRHGWRTAAII 324 (448)
T ss_dssp THHHHHHHH-SEEEEE-
T ss_pred hhhhhccccceEEEEEe
Confidence 98877777 99998873
No 158
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.23 E-value=0.00062 Score=59.16 Aligned_cols=51 Identities=18% Similarity=0.284 Sum_probs=43.1
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc-chhheecch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGN 237 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~-~f~~~i~~~ 237 (346)
..++||+.++|+.|++. ++++|+|+ +.+.++..+++.+++.. +|...+++.
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~---~~~~yA~~vl~~ldp~~~~F~~ri~~r 108 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTM---GTRAYAQAIAKLIDPDGKYFGDRIISR 108 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeC---CcHHHHHHHHHHhCcCCCeeccEEEEe
Confidence 55899999999999965 99999999 77899999999999984 774445443
No 159
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.08 E-value=0.0035 Score=50.32 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=34.7
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
++.||+.++|+.|+++|++++++||.+..........+..+|+.-
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 478999999999999999999999966444455666678889873
No 160
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.00 E-value=0.0041 Score=52.12 Aligned_cols=92 Identities=8% Similarity=0.130 Sum_probs=66.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
.-++++.+.+.|++|++. +.|.|.|+ .-.-.+....+..|+...- ++...+
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASg---Dr~gsl~~lae~~gi~~~r---v~a~a~---------------------- 78 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASG---DRKGSLVQLAEFVGIPVER---VFAGAD---------------------- 78 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecC---CcchHHHHHHHHcCCceee---eecccC----------------------
Confidence 345899999999999999 99999998 4455677778888875321 111000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
++- =..+++.|+-+.+-|+||||+.||+.+.++|.+...
T Consensus 79 ----------------------------------~e~-------K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~ 117 (152)
T COG4087 79 ----------------------------------PEM-------KAKIIRELKKRYEKVVMVGNGANDILALREADLGIC 117 (152)
T ss_pred ----------------------------------HHH-------HHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceE
Confidence 010 234567777777999999999999999999987754
Q ss_pred Ee
Q 019086 342 VM 343 (346)
Q Consensus 342 ~v 343 (346)
.+
T Consensus 118 ti 119 (152)
T COG4087 118 TI 119 (152)
T ss_pred Ee
Confidence 43
No 161
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.98 E-value=0.0025 Score=70.05 Aligned_cols=118 Identities=17% Similarity=0.223 Sum_probs=74.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh-heecchhhHHHhhhhccccccccccCcchh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~-~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
-+|+|++.+.|+.|+++|+++.++|+ .+...+..+...+|+..--. ..++.+.+. ..-.++.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el--------------~~l~~~e 608 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAEL--------------DALSDEE 608 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHh--------------hhcCHHH
Confidence 56999999999999999999999999 77899999999999864321 112222221 1111111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 341 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i 341 (346)
+.... . +-+ -+..=+|+.+..+ -.++++. ..-+.|.||+.||+.|.++|.+...
T Consensus 609 l~~~~----------------~--~~~-VfARvsP~qK~~I----V~~lq~~---g~vVamtGDGvNDapALk~ADVGIa 662 (917)
T COG0474 609 LAELV----------------E--ELS-VFARVSPEQKARI----VEALQKS---GHVVAMTGDGVNDAPALKAADVGIA 662 (917)
T ss_pred HHHHh----------------h--hCc-EEEEcCHHHHHHH----HHHHHhC---CCEEEEeCCCchhHHHHHhcCccEE
Confidence 00000 0 000 1112223333333 3334444 4679999999999999999998875
Q ss_pred Ee
Q 019086 342 VM 343 (346)
Q Consensus 342 ~v 343 (346)
+.
T Consensus 663 mg 664 (917)
T COG0474 663 MG 664 (917)
T ss_pred ec
Confidence 54
No 162
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.98 E-value=0.011 Score=51.45 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=32.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
.+||+.++...+.++|+++.-+|+.........+..+..+
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 6789999999999999999999996544455666666665
No 163
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=96.95 E-value=0.003 Score=69.11 Aligned_cols=41 Identities=17% Similarity=0.463 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~ 555 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGID 555 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 5789999999999999999999999 7788899999999996
No 164
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=96.92 E-value=0.0086 Score=52.81 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=23.6
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
.--|+.|||-+||.+|+.+|.+.|.+.
T Consensus 185 ~~~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 185 NIRIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred CceEEecCCchhhhHHHhcCccceeEE
Confidence 337999999999999999999988753
No 165
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.86 E-value=0.0041 Score=68.26 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~ 590 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLD 590 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 5789999999999999999999999 7788999999999995
No 166
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=96.84 E-value=0.0044 Score=68.06 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=38.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLE 590 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 6889999999999999999999999 7788899999999996
No 167
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.81 E-value=0.0041 Score=67.06 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=39.2
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|++|++.|+++.++|+ .....+..+.+.+|+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999 77889999999999964
No 168
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.78 E-value=0.012 Score=54.31 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=32.7
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCc-hhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~~ 228 (346)
..+.||+.||+.+.-++|.+|..+||..... ......=|.++|+..
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 5588999999999999999999999953221 112333344566664
No 169
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.71 E-value=0.0039 Score=68.76 Aligned_cols=42 Identities=29% Similarity=0.512 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~ 620 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILT 620 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCC
Confidence 6889999999999999999999999 77888999999999963
No 170
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=96.68 E-value=0.0049 Score=68.66 Aligned_cols=42 Identities=21% Similarity=0.310 Sum_probs=38.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+++|++.+.|+.|+++|++++++|+ .....+..+...+|+.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGII 686 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 7788899999999995
No 171
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.59 E-value=0.0029 Score=56.49 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.++++++++++++++|||+.+|+.|++.+|+..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 167 ALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 38999999999999999999999999999999998763
No 172
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.48 E-value=0.0029 Score=57.17 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=35.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
|++.+++.+|++++++++|||+.||++|.+.+|...++
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am 227 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM 227 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE
Confidence 58999999999999999999999999999999998665
No 173
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.39 E-value=0.003 Score=57.96 Aligned_cols=38 Identities=18% Similarity=0.120 Sum_probs=34.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 342 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~ 342 (346)
+++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 163 al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 163 ALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 38999999999999999999999999999999976653
No 174
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.37 E-value=0.01 Score=63.63 Aligned_cols=43 Identities=30% Similarity=0.483 Sum_probs=39.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
-+++|++...+..|++.|++++++|+ ..+..++.+.+.+|++.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~ 764 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDN 764 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcce
Confidence 45899999999999999999999999 77899999999999765
No 175
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=96.24 E-value=0.035 Score=52.46 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=38.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhh
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKI 232 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~ 232 (346)
...++||+.++|+.|+++|++++++||++....+.....+.. ++++--.+.
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~ 73 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD 73 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH
Confidence 356899999999999999999999999765555545566666 555443343
No 176
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.18 E-value=0.13 Score=47.33 Aligned_cols=130 Identities=20% Similarity=0.214 Sum_probs=71.0
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc--c------hhheecchhhH--HHhhhhcc--c
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--I------SKIKIVGNEEV--ERSLYGQF--V 249 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~--~------f~~~i~~~~e~--~~~~f~~i--~ 249 (346)
.+++.||+.+.+..|.+.=-++++ |. +...+++.+...+|+.. . +|..-+..++- ....|+.+ .
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~-ST---SY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~ 156 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVI-ST---SYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASL 156 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEE-ec---cHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccc
Confidence 367999999999999887445544 54 45788999999998831 1 12111222111 11122211 2
Q ss_pred cccccccCcchhHH----HHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 019086 250 LGKGISSGVDEQLA----TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 325 (346)
Q Consensus 250 ~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGD 325 (346)
.|+..-...|+... .|.+|.+++=|... -+ .+.++ ++..++--+.+.+ +++|||
T Consensus 157 ~geelfe~lDe~F~rLip~E~gki~~~vk~VG-------------gg-----~ka~i---~e~~~ele~~d~s-a~~VGD 214 (315)
T COG4030 157 SGEELFEKLDELFSRLIPSEVGKIVESVKAVG-------------GG-----EKAKI---MEGYCELEGIDFS-AVVVGD 214 (315)
T ss_pred cHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-------------Cc-----chhHH---HHHHHhhcCCCcc-eeEecC
Confidence 23333333344332 35555554433211 00 01111 4555555555544 999999
Q ss_pred ChhhHHHHHHcC
Q 019086 326 SQSGVAGAQRIG 337 (346)
Q Consensus 326 s~~Di~aA~~aG 337 (346)
|..|++|.+.+.
T Consensus 215 SItDv~ml~~~r 226 (315)
T COG4030 215 SITDVKMLEAAR 226 (315)
T ss_pred cccchHHHHHhh
Confidence 999999988764
No 177
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.01 E-value=0.022 Score=63.37 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=37.5
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|++|+++|++++++|+ .....+..+.+.+|+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 6799999999999999999999999 6678889999999984
No 178
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=95.99 E-value=0.052 Score=55.25 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=36.2
Q ss_pred HHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hCcccchhheecchh-hHH-Hhhhhcccccc
Q 019086 192 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EVE-RSLYGQFVLGK 252 (346)
Q Consensus 192 lL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lgl~~~f~~~i~~~~-e~~-~~~f~~i~~g~ 252 (346)
.++..+..| +++|+|. +++-.++..++. +|.+.. ++.+ +.. .++|++.+.|.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~V-----vGTEL~v~~~G~~TG~~~G~ 155 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADEV-----IGSELVVNRFGFATGFIRGT 155 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCceE-----EeeeEEEeeccEEEEEEecC
Confidence 556778888 9999999 788999999987 888863 3322 222 24566655543
No 179
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.89 E-value=0.037 Score=55.37 Aligned_cols=101 Identities=11% Similarity=0.111 Sum_probs=74.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 262 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~ 262 (346)
+-+.....++.+++.++|.+|+++|..- -+...++.++...|.+-.--....+++....
T Consensus 98 Lypn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nipiY~S~e~rl~-------------------- 156 (635)
T COG5610 98 LYPNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIPIYMSSEFRLK-------------------- 156 (635)
T ss_pred eeccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCceeeecceeehh--------------------
Confidence 4455567799999999999999999854 3467788888888887433222233322111
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 263 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
|-+-.+ |.++++.-+++|.+-+++||.. .|+.+++..|+.|.
T Consensus 157 -----------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 -----------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred -----------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 222222 8999999999999999999987 69999999999864
No 180
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.85 E-value=0.035 Score=62.12 Aligned_cols=41 Identities=20% Similarity=0.376 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+++|++.+.|+.|+++|+++.++|+ .....+..+...+|+-
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 5899999999999999999999999 7778899999999994
No 181
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.84 E-value=0.069 Score=50.47 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=32.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.||+.++|+.|+++|++++++||............+..+|+..
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 67899999999999999999999943222333335667788764
No 182
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.76 E-value=0.059 Score=55.20 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
+++|++.+.++.|++.|+++.++|+ .....+..+.+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 777888899998886
No 183
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.63 E-value=0.024 Score=51.15 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 189 v~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
..+.|++|+++|++++++|+ .....+..++..+++.
T Consensus 20 ~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 20 TIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGID 55 (254)
T ss_dssp HHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHC
T ss_pred HHHHHHhhcccceEEEEEcc---Ccccccccccccccch
Confidence 34666788889999999999 4456677888888876
No 184
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.54 E-value=0.11 Score=56.68 Aligned_cols=32 Identities=9% Similarity=-0.122 Sum_probs=27.2
Q ss_pred HHHHH---HHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 306 LRAGA---EYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 306 ~~~~~---e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
++.++ +.+|..++++++|||..+|..|.+.++
T Consensus 767 l~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 767 AKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 55554 457999999999999999999999886
No 185
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.38 E-value=0.05 Score=60.89 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=37.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+++||+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCC
Confidence 35899999999999999999999999 6678888888888874
No 186
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.28 E-value=0.067 Score=57.18 Aligned_cols=43 Identities=26% Similarity=0.465 Sum_probs=39.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
-+|+|++.+.++.|++.|++|.++|+ .....+..+...+|+-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~ 625 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFS 625 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCc
Confidence 46899999999999999999999999 77888999999999753
No 187
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.22 E-value=0.02 Score=53.33 Aligned_cols=40 Identities=23% Similarity=0.115 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|++.+++++++++++++++|||.||+.|. ..+...|+|.+
T Consensus 169 Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 169 ALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 59999999999999999999999999999 77778888765
No 188
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.20 E-value=0.031 Score=51.77 Aligned_cols=39 Identities=5% Similarity=-0.082 Sum_probs=35.0
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc-------CCCEEEe
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVM 343 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~a-------G~~~i~v 343 (346)
+++.++++++..++++++|||+.+|+.|++.+ |..+|.|
T Consensus 171 a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v 216 (244)
T TIGR00685 171 IVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI 216 (244)
T ss_pred HHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE
Confidence 38899999999999999999999999999999 6667666
No 189
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=94.65 E-value=0.092 Score=58.51 Aligned_cols=44 Identities=23% Similarity=0.260 Sum_probs=35.7
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+-++..||.|.|+.|+++|+|+.++|+ .-.+.+-.+.-..++.+
T Consensus 649 EDkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll~ 692 (1151)
T KOG0206|consen 649 EDKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLLR 692 (1151)
T ss_pred echhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCCC
Confidence 356889999999999999999999999 55666666766666653
No 190
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=94.58 E-value=0.1 Score=49.39 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=41.0
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.|.+.+.|.+|++.|.-+++=|. |.++.+..-++.+++.++|+..+.++
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCC
Confidence 34556777899999999988888 77899999999999999999866554
No 191
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.46 E-value=0.27 Score=55.58 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-++++|+.+.|+.|+++|+++.++|+ .....+..+....|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36899999999999999999999999 5667777777777763
No 192
>PTZ00174 phosphomannomutase; Provisional
Probab=94.31 E-value=0.036 Score=51.44 Aligned_cols=37 Identities=5% Similarity=-0.046 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEecC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (346)
|++.+++. ++++++||| +.||++|.+.+|...+.|.+
T Consensus 192 al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 192 CLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 47777777 599999999 89999999998888777653
No 193
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.27 E-value=0.35 Score=46.55 Aligned_cols=35 Identities=29% Similarity=0.521 Sum_probs=21.1
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEEeccCccccccc
Q 019086 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYR 100 (346)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~k~viFDlDGTL~d~~~ 100 (346)
.++++.+|...+ ..+++. .-++.||+||||+....
T Consensus 17 r~~~~kf~~~~s-~~ss~~-~fgfafDIDGVL~RG~~ 51 (389)
T KOG1618|consen 17 RPPMRKFISEIS-FESSPP-TFGFAFDIDGVLFRGHR 51 (389)
T ss_pred CCchhhhhcccC-CCCCCC-ceeEEEecccEEEecCC
Confidence 355555554433 223333 33999999999987443
No 194
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=94.25 E-value=0.38 Score=42.16 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=24.4
Q ss_pred HHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 310 AEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
.+...+ -+|++|+. |-++.|+.+|++.+.+-+
T Consensus 130 vrth~i----dlf~ed~~~na~~iAk~~~~~vilins 162 (194)
T COG5663 130 VRTHNI----DLFFEDSHDNAGQIAKNAGIPVILINS 162 (194)
T ss_pred hHhhcc----CccccccCchHHHHHHhcCCcEEEecC
Confidence 444544 46899986 778888999999998754
No 195
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.93 E-value=0.43 Score=41.27 Aligned_cols=31 Identities=13% Similarity=0.155 Sum_probs=28.5
Q ss_pred CCCCcEEEEcCCh-hhHHHHHHcCCCEEEecC
Q 019086 315 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 315 v~p~e~i~VGDs~-~Di~aA~~aG~~~i~v~~ 345 (346)
..++|.+||||.. .||.+|...|-..||++.
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 5789999999997 899999999999999875
No 196
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.79 E-value=0.4 Score=44.59 Aligned_cols=50 Identities=14% Similarity=0.212 Sum_probs=37.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhhee
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i 234 (346)
+.|++.++|++|+++|++++++||............++.+|++...+..+
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ii 67 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVF 67 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe
Confidence 56799999999999999999999843233455677788899875444433
No 197
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=93.71 E-value=0.2 Score=40.10 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=21.6
Q ss_pred EEEeccCccccccc-cccHHHHHHHHHHcCCCC
Q 019086 87 VLLEVDGVLVDAYR-FGNRQAFNVAFQKLGLDC 118 (346)
Q Consensus 87 viFDlDGTL~d~~~-~~~~~a~~~~~~~~gi~~ 118 (346)
++||+||||++... +.-...+.+.+++.|.+.
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~ 33 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPV 33 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCE
Confidence 68999999998443 223345566677778763
No 198
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=93.53 E-value=0.068 Score=45.85 Aligned_cols=48 Identities=19% Similarity=0.527 Sum_probs=37.4
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc-ccchhhee
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 234 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl-~~~f~~~i 234 (346)
..++||+.+||+.|.+. +.++|.|. +...+++.+++.+.. ..+|+..+
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~---~~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTS---ASEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-S---S-HHHHHHHHHHHTTTTSSEEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEe---ehhhhhhHHHHhhhhhcccccccc
Confidence 44799999999999665 99999999 778999999999998 45665543
No 199
>PRK10444 UMP phosphatase; Provisional
Probab=93.24 E-value=0.57 Score=43.69 Aligned_cols=43 Identities=23% Similarity=0.505 Sum_probs=33.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.||+.++|+.|+++|++++++||............+..+|++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 6899999999999999999999996543334455556667875
No 200
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=92.92 E-value=0.66 Score=43.30 Aligned_cols=57 Identities=30% Similarity=0.514 Sum_probs=39.2
Q ss_pred HHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 177 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 177 ~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
.+......+++|+.++++.|+++++++.|+|+ +--..++.++++.|... -++.|+|+
T Consensus 83 ~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~~~-~Nv~VvSN 139 (246)
T PF05822_consen 83 AVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGVFH-PNVKVVSN 139 (246)
T ss_dssp HHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT--B-TTEEEEEE
T ss_pred HHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCCCC-CCeEEEee
Confidence 33345688999999999999999999999999 77899999999875432 24446664
No 201
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=92.72 E-value=0.17 Score=51.52 Aligned_cols=43 Identities=16% Similarity=0.394 Sum_probs=38.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
..||++|-.++||+-|++++.+|+ ...-.+..+....|++++.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfi 490 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFI 490 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhh
Confidence 469999999999999999999999 5667788888999999864
No 202
>PLN02423 phosphomannomutase
Probab=92.23 E-value=0.13 Score=47.90 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=30.0
Q ss_pred HHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEecC
Q 019086 310 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGD----s~~Di~aA~~aG~~~i~v~~ 345 (346)
++.+. +++++++||| +.||++|.+.-|..++-|++
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 33444 9999999999 79999999999999998875
No 203
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=91.97 E-value=0.25 Score=48.08 Aligned_cols=129 Identities=14% Similarity=0.081 Sum_probs=72.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHH-hC--cccchhheecchhhHHHhhhhccccccccccCcchh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LG--SERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 261 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~-lg--l~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~ 261 (346)
-.|....+++.|+++|.++-++||+ +-..+...+.. .| +.++||++|+-.+.. ++|+.-.-..- .-|+
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNS---PysFVd~GM~flvG~~WRdlFDVVIvqA~KP--~Fftde~rPfR---~~de- 311 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNS---PYSFVDKGMRFLVGDDWRDLFDVVIVQANKP--EFFTDERRPFR---KYDE- 311 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCC---chhhhhcCceeeeCccHHhhhheeEEecCCC--cccccccCcch---hhcc-
Confidence 4578889999999999999999994 44444444443 23 347888876554322 12322110000 0000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHH-HcCCC
Q 019086 262 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RIGMP 339 (346)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~-~Di~aA~-~aG~~ 339 (346)
| ++ ...|-..-|.+++ +-...+- +...++--|....+++++||+. +|+.... ..||+
T Consensus 312 ------k-----~~--sl~wdkv~klekg-----kiYy~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWR 370 (510)
T KOG2470|consen 312 ------K-----RG--SLLWDKVDKLEKG-----KIYYQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWR 370 (510)
T ss_pred ------c-----cc--chhhhhhhhcccC-----ceeeecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccc
Confidence 0 00 0001111111111 0111111 4566677788899999999997 8998877 89998
Q ss_pred EEEe
Q 019086 340 CVVM 343 (346)
Q Consensus 340 ~i~v 343 (346)
|-.|
T Consensus 371 TgAI 374 (510)
T KOG2470|consen 371 TGAI 374 (510)
T ss_pred cccc
Confidence 7543
No 204
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=91.70 E-value=0.23 Score=43.04 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=40.9
Q ss_pred CCceEEEEeccCcccccccc-----ccHHHH-------HHHHHHcCCCCCCCChHHHHHHHhhccCChHHHHHHHHHHhC
Q 019086 82 PRDLAVLLEVDGVLVDAYRF-----GNRQAF-------NVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRIG 149 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~-----~~~~a~-------~~~~~~~gi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g 149 (346)
..+|.+|||+||||.|..-+ ....+| .+++.+.|+. ..+.+|+...+.+...+.+|
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~------------vAIITGr~s~ive~Ra~~LG 73 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIK------------VAIITGRDSPIVEKRAKDLG 73 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCe------------EEEEeCCCCHHHHHHHHHcC
Confidence 46889999999999984321 011222 3566777777 23556777778778888888
Q ss_pred CCCCC
Q 019086 150 WPTSV 154 (346)
Q Consensus 150 ~~~~~ 154 (346)
+..-+
T Consensus 74 I~~~~ 78 (170)
T COG1778 74 IKHLY 78 (170)
T ss_pred Cceee
Confidence 76443
No 205
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=91.58 E-value=0.3 Score=44.75 Aligned_cols=22 Identities=0% Similarity=-0.094 Sum_probs=16.6
Q ss_pred CCCc-EEEEcCChhhHHHHHHcC
Q 019086 316 PVRN-CFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 316 ~p~e-~i~VGDs~~Di~aA~~aG 337 (346)
...+ ++.+||+.||+.+.....
T Consensus 207 ~~~r~t~~~GDg~nD~Pl~ev~d 229 (274)
T COG3769 207 GGARTTLGLGDGPNDAPLLEVMD 229 (274)
T ss_pred CceeEEEecCCCCCcccHHHhhh
Confidence 3444 888999999998876543
No 206
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=91.47 E-value=0.4 Score=44.84 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=35.0
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.||+.++|+.|+++|++++++||............++.+|++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6889999999999999999999995433334566777888986
No 207
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=91.09 E-value=0.77 Score=48.02 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=30.1
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
||..|-..++++|+++..||....+.....+..|..+..+.
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG 602 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDG 602 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcC
Confidence 56666678889999999999866666666777777666553
No 208
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.58 E-value=0.82 Score=41.22 Aligned_cols=39 Identities=21% Similarity=0.451 Sum_probs=35.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+|++.+||+.+.+ .+.|+|-|. +...++..+++.+|+.
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTA---a~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSA---TSMKWIEIKMTELGVL 84 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEec---CCHHHHHHHHHHhccc
Confidence 68999999999999 599999999 6689999999998874
No 209
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=90.45 E-value=0.32 Score=40.43 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=13.3
Q ss_pred eEEEEeccCcccccc
Q 019086 85 LAVLLEVDGVLVDAY 99 (346)
Q Consensus 85 k~viFDlDGTL~d~~ 99 (346)
|+++||+||||++..
T Consensus 1 kli~~DlD~Tl~~~~ 15 (128)
T TIGR01681 1 KVIVFDLDNTLWTGE 15 (128)
T ss_pred CEEEEeCCCCCCCCC
Confidence 589999999999874
No 210
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=90.02 E-value=3.5 Score=37.91 Aligned_cols=49 Identities=18% Similarity=0.305 Sum_probs=34.1
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCch-hHHHHHHHHhCcccchhh
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-RIARSVVEKLGSERISKI 232 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~-~~~~~~l~~lgl~~~f~~ 232 (346)
.++|++.++|..++++|+++.++||...... ...+.+.+.+|+.--.+.
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~ 63 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQ 63 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 3688999999999999999999999652223 333344443787643333
No 211
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=89.79 E-value=1.9 Score=40.71 Aligned_cols=32 Identities=3% Similarity=-0.105 Sum_probs=24.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
++.++++++....-.++.||-..|=.+.+.+.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 77778888777667999999987766666555
No 212
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=89.64 E-value=0.63 Score=45.91 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=19.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
++|.+..=|..+.+.|+.++|.||.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecc
Confidence 4555556677888889999999985
No 213
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=89.39 E-value=0.2 Score=41.94 Aligned_cols=25 Identities=8% Similarity=0.041 Sum_probs=20.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
+.+++.+.|.+++++|+.++++|+.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR 49 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSR 49 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5566778888888899999999984
No 214
>PTZ00174 phosphomannomutase; Provisional
Probab=88.99 E-value=0.44 Score=44.12 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=24.2
Q ss_pred CCCceEEEEeccCccccccccccHHHHHHHH---HHcCCC
Q 019086 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAF---QKLGLD 117 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d~~~~~~~~a~~~~~---~~~gi~ 117 (346)
.|++|.|+|||||||++.... ..+...+++ ++.|+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFK 40 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCE
Confidence 367899999999999987653 223334443 445765
No 215
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=88.70 E-value=1.8 Score=46.83 Aligned_cols=42 Identities=26% Similarity=0.442 Sum_probs=38.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
-+.+||+.+.++.|+.+|++|-.+|+ +.-..++.+...+|+.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGIL 687 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGIL 687 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHcccc
Confidence 45799999999999999999999999 6678899999999985
No 216
>PLN02423 phosphomannomutase
Probab=88.68 E-value=0.47 Score=44.03 Aligned_cols=31 Identities=13% Similarity=0.186 Sum_probs=19.8
Q ss_pred CCceEEE-EeccCccccccccccHHHHHHHHHH
Q 019086 82 PRDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (346)
Q Consensus 82 ~~~k~vi-FDlDGTL~d~~~~~~~~a~~~~~~~ 113 (346)
.+++.++ |||||||++.... ..+...+++++
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred CccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 3566666 9999999987653 22344444444
No 217
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=86.92 E-value=1.1 Score=48.22 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=26.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 019086 305 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 337 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG 337 (346)
+++.+++ +++++.++++||+.||+.|.+.++
T Consensus 661 al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 661 AVRRLLE--AGPYDFVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred HHHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence 3666666 788899999999999999999974
No 218
>PLN03017 trehalose-phosphatase
Probab=86.32 E-value=1.6 Score=43.16 Aligned_cols=32 Identities=13% Similarity=-0.099 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCC---CcEEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p---~e~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|... .-.|||||-..|-.|.+.+
T Consensus 287 Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 287 ALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred HHHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 5888899988753 3489999999888777766
No 219
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=85.63 E-value=3 Score=41.94 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=27.7
Q ss_pred HHHHHHHHcCCCCCcEE-EEcCChhhHHHHHHcCCC
Q 019086 305 ALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e~i-~VGDs~~Di~aA~~aG~~ 339 (346)
||..-++.++.++..-+ -+|....|+.+=+.+|++
T Consensus 481 ayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 481 AYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 57777777877776544 688999999999888887
No 220
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=85.39 E-value=0.44 Score=42.13 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.5
Q ss_pred CceEEEEeccCccccc
Q 019086 83 RDLAVLLEVDGVLVDA 98 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~ 98 (346)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999985
No 221
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=85.19 E-value=5.9 Score=42.20 Aligned_cols=27 Identities=26% Similarity=0.363 Sum_probs=24.3
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTA 208 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn 208 (346)
.-++..+++-.|+.||++|++|..+|+
T Consensus 656 EDkLQ~dVk~tLElLRNAgikiWMLTG 682 (1051)
T KOG0210|consen 656 EDKLQDDVKPTLELLRNAGIKIWMLTG 682 (1051)
T ss_pred HHHHhhhhHhHHHHHhhcCcEEEEEcC
Confidence 345788999999999999999999998
No 222
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=84.50 E-value=3.9 Score=34.35 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=36.8
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
...++++...|..|+++|+++++.|+... ..++...|+.+.+..
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~a--p~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTMA--PQIASQGLETFKVKQ 86 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCCC--HHHHHHHHHHhccCc
Confidence 44899999999999999999999999642 577888888877654
No 223
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=84.24 E-value=9.2 Score=36.70 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=33.8
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
.+.||+.|.++.|++.|.++.++||.+...++.....++++|+.+
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~ 82 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS 82 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc
Confidence 478999999999999999999999944333333334455677765
No 224
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=83.84 E-value=0.58 Score=41.12 Aligned_cols=17 Identities=41% Similarity=0.597 Sum_probs=15.0
Q ss_pred CceEEEEeccCcccccc
Q 019086 83 RDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~ 99 (346)
.+|++|||+||||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 48899999999999963
No 225
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=83.80 E-value=7 Score=36.54 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=36.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~~ 345 (346)
|+.+.+++|-+.-.-++|||+..--.+|+..+|+.+.|..
T Consensus 219 Fe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 219 FKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 9999999998788899999999999999999999998764
No 226
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=83.12 E-value=1.8 Score=40.56 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=34.4
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
.|.+.++|+.|+++|++++++|+ .....+..+++.+|+..+
T Consensus 23 ~~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~ 63 (273)
T PRK00192 23 YEPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDP 63 (273)
T ss_pred cHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Confidence 45677899999999999999999 556778889999998753
No 227
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=81.09 E-value=1.4 Score=38.37 Aligned_cols=13 Identities=31% Similarity=0.468 Sum_probs=11.9
Q ss_pred eEEEEeccCcccc
Q 019086 85 LAVLLEVDGVLVD 97 (346)
Q Consensus 85 k~viFDlDGTL~d 97 (346)
|+++||.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 6899999999994
No 228
>PLN02580 trehalose-phosphatase
Probab=81.06 E-value=3.3 Score=41.24 Aligned_cols=32 Identities=9% Similarity=-0.030 Sum_probs=27.2
Q ss_pred HHHHHHHHcCCCCCc---EEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPVRN---CFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e---~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.+|+...+ .++|||..+|..|.+.+
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L 339 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVL 339 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHhh
Confidence 588999999988764 38999999999999963
No 229
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=79.95 E-value=0.92 Score=38.73 Aligned_cols=16 Identities=31% Similarity=0.598 Sum_probs=13.0
Q ss_pred eEEEEeccCccccccc
Q 019086 85 LAVLLEVDGVLVDAYR 100 (346)
Q Consensus 85 k~viFDlDGTL~d~~~ 100 (346)
|.+|||+||||+.+..
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999998665
No 230
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.83 E-value=3 Score=39.06 Aligned_cols=44 Identities=30% Similarity=0.453 Sum_probs=32.9
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHH-HhCccc
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSER 228 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~-~lgl~~ 228 (346)
...++.|..++.+.|+.+++++.|.|. +.-..++.+.. +.++-+
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSA---GigdiiEev~~q~~~~~p 180 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSA---GIGDIIEEVTRQKLVLHP 180 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEec---chHHHHHHHHHHHhccCc
Confidence 345788999999999999999999999 55555555554 344443
No 231
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=78.74 E-value=3.5 Score=40.98 Aligned_cols=129 Identities=10% Similarity=-0.045 Sum_probs=71.5
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhcccccccc-ccCcchhHHHH
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI-SSGVDEQLATE 265 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v-~~~~~~~~~~~ 265 (346)
+-...++..+++.|.++-++||+............-..+...+|+++++......- ++.+.+..+.. .+|.
T Consensus 201 ~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~f-f~e~~vlreV~t~~g~------- 272 (424)
T KOG2469|consen 201 GTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGF-FHEGTVLREVEPQEGL------- 272 (424)
T ss_pred CccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCcc-ccccceeeeecccccc-------
Confidence 33444899999999999999996443322222222223577899988766532211 11111111111 1110
Q ss_pred HHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-h-HHHHHHcCCCEEEe
Q 019086 266 ARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-G-VAGAQRIGMPCVVM 343 (346)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~-D-i~aA~~aG~~~i~v 343 (346)
.....--+|.-....++... .+.+++.+++...+++++||+.. | +..-+.-|++++.|
T Consensus 273 -------------l~~g~~~~p~e~~~~ySggs-------~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv 332 (424)
T KOG2469|consen 273 -------------LKNGDNTGPLEQGGVYSGGS-------LKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLV 332 (424)
T ss_pred -------------ccccccCCcchhcccCCcch-------HHHHHHHhcccccceeecccceeeeEEecceecceEEEEE
Confidence 00000012222222333332 67778889999999999999985 5 45567788887765
No 232
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=78.69 E-value=5.2 Score=38.39 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=34.8
Q ss_pred cCCCCCCCcHHHHHHHHHhCC-CCEEEEcCCCCCchhHHHHHHHHhCcccc
Q 019086 180 SKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERI 229 (346)
Q Consensus 180 ~~~~~~~pgv~elL~~L~~~G-i~v~ilTn~~~~~~~~~~~~l~~lgl~~~ 229 (346)
++...++|..-++|+.+|+.| +++.|+||+ .. ..+++.+...++
T Consensus 88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNg---sl---pdv~~~L~~~dq 132 (296)
T COG0731 88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNG---SL---PDVLEELKLPDQ 132 (296)
T ss_pred CCCcccccCHHHHHHHHHhcCCceEEEEeCC---Ch---HHHHHHhccCCE
Confidence 567889999999999999999 799999994 33 566666664333
No 233
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=78.59 E-value=1.7 Score=39.57 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=12.3
Q ss_pred EEEEeccCccccccc
Q 019086 86 AVLLEVDGVLVDAYR 100 (346)
Q Consensus 86 ~viFDlDGTL~d~~~ 100 (346)
+|++||||||++...
T Consensus 1 li~~DlDgTLl~~~~ 15 (236)
T TIGR02471 1 LIITDLDNTLLGDDE 15 (236)
T ss_pred CeEEeccccccCCHH
Confidence 478999999998554
No 234
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=78.40 E-value=3.4 Score=37.05 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 189 v~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
..+.|+.|+++|++++++|+ .+...+..+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~Tg---R~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTS---KTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 67899999999999999999 6678888999999986
No 235
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=77.54 E-value=4.1 Score=37.23 Aligned_cols=40 Identities=15% Similarity=0.280 Sum_probs=33.3
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
.|...++|++|+++|++++++|+ .....+..+++.+|+..
T Consensus 17 ~~~~~~ai~~l~~~G~~~vi~Tg---R~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 17 PGPAREALEELKDLGFPIVFVSS---KTRAEQEYYREELGVEP 56 (225)
T ss_pred chHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCCC
Confidence 45688999999999999999999 44566777888999854
No 236
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=77.15 E-value=3.7 Score=36.77 Aligned_cols=41 Identities=20% Similarity=0.342 Sum_probs=33.6
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|++|+++|++++++|+ .....+..+.+.+++..
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TG---R~~~~~~~~~~~l~~~~ 59 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTG---NTVPFARALAVLIGTSG 59 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcC---CcchhHHHHHHHhCCCC
Confidence 456777999999999999999999 44566777888888864
No 237
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=76.97 E-value=1.3 Score=38.47 Aligned_cols=16 Identities=19% Similarity=0.478 Sum_probs=11.8
Q ss_pred eEEEEeccCccccccc
Q 019086 85 LAVLLEVDGVLVDAYR 100 (346)
Q Consensus 85 k~viFDlDGTL~d~~~ 100 (346)
|.++||+||||+.+..
T Consensus 1 Kia~fD~DgTLi~~~s 16 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS 16 (159)
T ss_dssp SEEEE-SCTTTEE-ST
T ss_pred CEEEEeCCCCccCCCC
Confidence 5789999999998654
No 238
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=76.74 E-value=15 Score=35.33 Aligned_cols=43 Identities=26% Similarity=0.287 Sum_probs=32.0
Q ss_pred CCCcHHHHHHHHHhC----CCCEEEEcCCCCCc-hhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSG-DRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~----Gi~v~ilTn~~~~~-~~~~~~~l~~lgl~ 227 (346)
+.||+.++++.|+.+ |+++.++||.+... ...++.+.+.+|++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 589999999999998 99999999943111 23344455778875
No 239
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=75.43 E-value=12 Score=38.24 Aligned_cols=93 Identities=16% Similarity=0.164 Sum_probs=63.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 264 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~ 264 (346)
++....++|..|+.+|+-++|+|- |..+.+..++.+..-- ++..+ .|+++-...
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SK---N~~~da~evF~khp~M------iLkee-----dfa~~~iNW------------ 309 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSK---NTEKDAKEVFRKHPDM------ILKEE-----DFAVFQINW------------ 309 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecC---CchhhHHHHHhhCCCe------EeeHh-----hhhhheecC------------
Confidence 344567889999999999999998 7778888888764421 11111 122222111
Q ss_pred HHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 019086 265 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~ 338 (346)
-|.. + -++.+++++++..+..+|++|++...+--+.-+=
T Consensus 310 ---------------------~~K~-------e-------NirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 310 ---------------------DPKA-------E-------NIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred ---------------------Ccch-------h-------hHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 0111 1 1899999999999999999999987776666553
No 240
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=74.66 E-value=8 Score=42.01 Aligned_cols=42 Identities=19% Similarity=0.369 Sum_probs=34.2
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.++.|+.+..|++|.+.+++++.+|+ ...-.+-++.+.+|+-
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITG---DnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITG---DNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeC---CCccchheehheeeee
Confidence 56889999999999999999999998 4445566666666664
No 241
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=73.97 E-value=5.1 Score=36.02 Aligned_cols=41 Identities=24% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|.+|+++|++++++|+ .+...+..++..+|+..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATG---NVLCFARAAAKLIGTSG 61 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcC---CchHHHHHHHHHhCCCC
Confidence 345667888999999999999999 44556677788888864
No 242
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=73.90 E-value=8.8 Score=33.59 Aligned_cols=26 Identities=23% Similarity=0.469 Sum_probs=19.6
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
-++||++.. ...|++.|++++.+.++
T Consensus 127 ~viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 127 DVIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp -EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred cEEECCHHH-HHHHHHcCCcEEEEEec
Confidence 467888864 78899999999998763
No 243
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=73.45 E-value=5.5 Score=36.62 Aligned_cols=40 Identities=15% Similarity=0.413 Sum_probs=32.8
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+.+...+.|++|+++|++++++|+ .....+..+++.+++.
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTG---R~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATG---RPYKEVKNILKELGLD 56 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 446677899999999999999999 4456677788888876
No 244
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=73.15 E-value=5.1 Score=37.26 Aligned_cols=41 Identities=12% Similarity=0.045 Sum_probs=33.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|++|+++|++++++|+ .+-..+..+++.+++..
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATG---RHVLEMQHILGALSLDA 60 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCCC
Confidence 445567889999999999999999 44566778888888864
No 245
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=73.13 E-value=5.7 Score=36.76 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|++|+++|++++++|+ .+-..+..+++.+++..
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTG---RPYAGVHRYLKELHMEQ 61 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecC---CChHHHHHHHHHhCCCC
Confidence 344566889999999999999999 44556777888888753
No 246
>PRK10976 putative hydrolase; Provisional
Probab=72.90 E-value=5.4 Score=36.87 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=32.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|.+++++|++++++|+ .....+..+++.+|++.
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATG---RHHVDVGQIRDNLEIKS 60 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHhcCCCC
Confidence 345567889999999999999999 44455677888888864
No 247
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=72.02 E-value=6.4 Score=36.39 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=37.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
....+...+.|++++++|++++++|+ .+-..+..+++.+++..
T Consensus 19 ~~i~~~~~~al~~~~~~g~~v~iaTG---R~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 19 KTISPETKEALARLREKGVKVVLATG---RPLPDVLSILEELGLDG 61 (264)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCc
Confidence 34778899999999999999999999 55578899999999985
No 248
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=71.42 E-value=7.5 Score=35.85 Aligned_cols=41 Identities=15% Similarity=0.222 Sum_probs=33.2
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|.+++++|++++++|+ .....+..+++.++++.
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTG---R~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTG---RHHVAIHPFYQALALDT 61 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHhcCCCC
Confidence 566778999999999999999999 44455677888888763
No 249
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=71.11 E-value=2.5 Score=39.03 Aligned_cols=16 Identities=31% Similarity=0.569 Sum_probs=13.4
Q ss_pred CceEEEEeccCccccc
Q 019086 83 RDLAVLLEVDGVLVDA 98 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~ 98 (346)
+.++++||+||||++.
T Consensus 2 ~~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEI 17 (244)
T ss_pred CcEEEEEecCccccCC
Confidence 3468999999999974
No 250
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=69.56 E-value=37 Score=35.29 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=27.3
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++...|..+++.+-++++++.. +....++.+.+.++++
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~--~~~~~~~~~~~ll~~~ 122 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQ--DTPPALRRFQAAFNLD 122 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecC--cccHHHHHHHHHhCCc
Confidence 4556666777778899999874 3356677777777776
No 251
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=69.55 E-value=8.2 Score=35.62 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=31.3
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
...+.|+.|+++|++++++|+ .....+..+++.+|+.
T Consensus 20 ~~~~~i~~l~~~g~~~~~~Tg---R~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTS---KTAAEVEYLRKELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 467899999999999999999 4556678888888875
No 252
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=68.90 E-value=40 Score=31.50 Aligned_cols=97 Identities=25% Similarity=0.304 Sum_probs=60.8
Q ss_pred CCCCCCcHHHHHHHHHhC---CCCEE-EEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccC
Q 019086 182 DAPLRPGVEDFVDDAYNE---GIPLI-VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 257 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~---Gi~v~-ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~ 257 (346)
...++|+..++++.++.- |+.+. ++++ +...-..+..+|.+-. ...|.-+.++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~d-----d~~~ar~l~~~G~~~v------------------mPlg~pIGsg 158 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTD-----DPVLAKRLEDAGCAAV------------------MPLGSPIGSG 158 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCEe------------------CCCCcCCCCC
Confidence 455899999999998887 99999 6665 3444455555566531 1223333333
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC---hhhHHHHH
Q 019086 258 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQ 334 (346)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs---~~Di~aA~ 334 (346)
.- --+ |+. ++.+.+..++ .|++|.+ ..|+..|-
T Consensus 159 ~G--------------------------i~~-----------~~~---I~~I~e~~~v----pVI~egGI~tpeda~~Am 194 (248)
T cd04728 159 QG--------------------------LLN-----------PYN---LRIIIERADV----PVIVDAGIGTPSDAAQAM 194 (248)
T ss_pred CC--------------------------CCC-----------HHH---HHHHHHhCCC----cEEEeCCCCCHHHHHHHH
Confidence 10 001 222 5555555433 4666654 47999999
Q ss_pred HcCCCEEEecC
Q 019086 335 RIGMPCVVMRS 345 (346)
Q Consensus 335 ~aG~~~i~v~~ 345 (346)
..|...|+|.+
T Consensus 195 elGAdgVlV~S 205 (248)
T cd04728 195 ELGADAVLLNT 205 (248)
T ss_pred HcCCCEEEECh
Confidence 99999999875
No 253
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=68.81 E-value=7.9 Score=34.56 Aligned_cols=41 Identities=20% Similarity=0.429 Sum_probs=31.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+.|...+.|.+|+++|++++++|+ .+...+..++..+|+..
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTG---R~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTG---NSVQFARALAKLIGTPD 56 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcC---CchHHHHHHHHHhCCCC
Confidence 445667889999999999999999 44556677788888543
No 254
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=67.75 E-value=7.4 Score=41.15 Aligned_cols=53 Identities=23% Similarity=0.335 Sum_probs=46.6
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc-cchhheecchhh
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 239 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~-~~f~~~i~~~~e 239 (346)
.+++|++.+||+++.+. +.+.|+|- +.+.++..+...+..+ .+|..+|++.++
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTm---g~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTM---GTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEec---cchHHHHHHHHHhCCCCccccceEEEecC
Confidence 56899999999999976 99999999 7789999999999997 778877888755
No 255
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=67.24 E-value=8.9 Score=35.77 Aligned_cols=38 Identities=11% Similarity=0.214 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+...+.|.+|+++|++++++|+ .....+..+++.+|++
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTG---R~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSS---KTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHhCCC
Confidence 4456888999999999999999 5556778888999985
No 256
>PRK00208 thiG thiazole synthase; Reviewed
Probab=67.11 E-value=47 Score=31.11 Aligned_cols=97 Identities=25% Similarity=0.309 Sum_probs=61.0
Q ss_pred CCCCCCcHHHHHHHHHhC---CCCEE-EEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccC
Q 019086 182 DAPLRPGVEDFVDDAYNE---GIPLI-VLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 257 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~---Gi~v~-ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~ 257 (346)
...+.|+..++++.++.- |+.+. ++++ +...-..+..+|.+-. ...|.-+.++
T Consensus 102 ~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~-----d~~~ak~l~~~G~~~v------------------mPlg~pIGsg 158 (250)
T PRK00208 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTD-----DPVLAKRLEEAGCAAV------------------MPLGAPIGSG 158 (250)
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCEe------------------CCCCcCCCCC
Confidence 345789999999988887 99999 6766 3444455555666532 1223333333
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC---hhhHHHHH
Q 019086 258 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQ 334 (346)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs---~~Di~aA~ 334 (346)
.. --+ |.. ++.+.+..++ .|++|-+ ..|+..|-
T Consensus 159 ~g--------------------------i~~-----------~~~---i~~i~e~~~v----pVIveaGI~tpeda~~Am 194 (250)
T PRK00208 159 LG--------------------------LLN-----------PYN---LRIIIEQADV----PVIVDAGIGTPSDAAQAM 194 (250)
T ss_pred CC--------------------------CCC-----------HHH---HHHHHHhcCC----eEEEeCCCCCHHHHHHHH
Confidence 10 001 222 5555555443 4666655 46999999
Q ss_pred HcCCCEEEecC
Q 019086 335 RIGMPCVVMRS 345 (346)
Q Consensus 335 ~aG~~~i~v~~ 345 (346)
..|...|+|.+
T Consensus 195 elGAdgVlV~S 205 (250)
T PRK00208 195 ELGADAVLLNT 205 (250)
T ss_pred HcCCCEEEECh
Confidence 99999999876
No 257
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=65.70 E-value=9.5 Score=36.67 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=32.3
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+-+.+.|++|+++|++++++|+ .....+..+.+.+++..
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTG---Rt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSL---RTRAQLEHLCRQLRLEH 59 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHhCCCC
Confidence 3466889999999999999999 44566778889999875
No 258
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=65.34 E-value=6 Score=34.39 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=21.9
Q ss_pred CCceEEEEeccCccccccccc-c--HHHHHHHHHHcCCC
Q 019086 82 PRDLAVLLEVDGVLVDAYRFG-N--RQAFNVAFQKLGLD 117 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~~~~-~--~~a~~~~~~~~gi~ 117 (346)
..+++|++|+||||+...... + ...+.+.+++.|+.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~g~~ 61 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAAGRK 61 (170)
T ss_pred CCCCEEEEecCCccccCCCCCcChhHHHHHHHHHHcCCE
Confidence 357899999999999644311 1 12234444555655
No 259
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=65.26 E-value=53 Score=30.63 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=29.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh--hhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQ--SGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~--~Di~aA~~aG~~~i~v~~ 345 (346)
-+..+...|+ .||+|||.+ -+....+.-|+..|.+.-
T Consensus 79 ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 79 AREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred HHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEec
Confidence 5666777776 599999987 467899999999998753
No 260
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=65.14 E-value=55 Score=30.91 Aligned_cols=26 Identities=8% Similarity=0.051 Sum_probs=22.9
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEecCC
Q 019086 320 CFLIAGSQSGVAGAQRIGMPCVVMRSR 346 (346)
Q Consensus 320 ~i~VGDs~~Di~aA~~aG~~~i~v~~~ 346 (346)
-||++|....++.|. .+.+++.|+.+
T Consensus 235 hIFFDDQ~~H~~~a~-~~vps~hVP~g 260 (264)
T PF06189_consen 235 HIFFDDQDGHLESAS-KVVPSGHVPYG 260 (264)
T ss_pred CEeecCchhhhhHhh-cCCCEEeccCC
Confidence 689999999999998 88999988753
No 261
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=64.89 E-value=8.5 Score=41.51 Aligned_cols=36 Identities=3% Similarity=0.047 Sum_probs=26.4
Q ss_pred CCCcHHHHHHHHHh-CCCCEEEEcCCCCCchhHHHHHHHH
Q 019086 185 LRPGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVEK 223 (346)
Q Consensus 185 ~~pgv~elL~~L~~-~Gi~v~ilTn~~~~~~~~~~~~l~~ 223 (346)
+.+.+.+.|+.|.+ .|+.|+|+|+ .....++..+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSG---R~~~~l~~~~~~ 551 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISG---RDRDTLERWFGD 551 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeC---CCHHHHHHHhCC
Confidence 45788899999999 4999999999 334445444443
No 262
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=64.61 E-value=7.4 Score=33.36 Aligned_cols=50 Identities=14% Similarity=0.078 Sum_probs=32.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCC---CchhHHHHHHHHhCcccchhhe
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGK---SGDRIARSVVEKLGSERISKIK 233 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~---~~~~~~~~~l~~lgl~~~f~~~ 233 (346)
+...|++++.+.+|-+. +.|.|+|..-. +...-.+-+.+.+.+-.+-.++
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~v 119 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIV 119 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEE
Confidence 45789999999999997 99999998421 1122334445555555444443
No 263
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=64.15 E-value=21 Score=38.95 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=34.9
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
-+|++.+.+.+..+|++|+++..+|+ .....+..+...-|+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTg---dhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKSVGI 629 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEec---Cccchhhhhhhheee
Confidence 46889999999999999999999999 666777777777774
No 264
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=63.49 E-value=28 Score=32.70 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=14.0
Q ss_pred CceEEEEeccCcccccc
Q 019086 83 RDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~ 99 (346)
..++++||+||||.+..
T Consensus 157 ~~~~~~~D~dgtl~~~~ 173 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMG 173 (300)
T ss_pred CCCEEEEECCCcCcCCC
Confidence 35799999999999744
No 265
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=63.28 E-value=13 Score=31.13 Aligned_cols=15 Identities=7% Similarity=0.217 Sum_probs=12.8
Q ss_pred ceEEEEeccCccccc
Q 019086 84 DLAVLLEVDGVLVDA 98 (346)
Q Consensus 84 ~k~viFDlDGTL~d~ 98 (346)
+|+|+||+||||+..
T Consensus 1 ~K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 1 MKRLVMDLDNTITLT 15 (126)
T ss_pred CCEEEEeCCCCcccC
Confidence 479999999999753
No 266
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=61.07 E-value=29 Score=33.62 Aligned_cols=29 Identities=14% Similarity=0.325 Sum_probs=25.9
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
+...++|.+.++++.++++|+.+.|.||.
T Consensus 139 GEPlL~p~l~eli~~~k~~Gi~~~L~TNG 167 (322)
T PRK13762 139 GEPTLYPYLPELIEEFHKRGFTTFLVTNG 167 (322)
T ss_pred ccccchhhHHHHHHHHHHcCCCEEEECCC
Confidence 44557899999999999999999999994
No 267
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=59.61 E-value=6.4 Score=36.50 Aligned_cols=39 Identities=18% Similarity=0.248 Sum_probs=22.6
Q ss_pred HHHHHHHHHhCCCCEEEE-cCCC--------CCchhHHHHHHHHhCcc
Q 019086 189 VEDFVDDAYNEGIPLIVL-TAYG--------KSGDRIARSVVEKLGSE 227 (346)
Q Consensus 189 v~elL~~L~~~Gi~v~il-Tn~~--------~~~~~~~~~~l~~lgl~ 227 (346)
+.++-+.|+++|+.+-++ |+.. -+-...++.+.+++++.
T Consensus 133 ~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~ 180 (247)
T PF05116_consen 133 LEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIP 180 (247)
T ss_dssp HHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCC
Confidence 445556677888887654 4310 01126688888888886
No 268
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=59.16 E-value=40 Score=32.47 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=25.4
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
+..-++|++.++++.++++|+.+.++||.
T Consensus 81 GEPLL~pdl~eiv~~~~~~g~~v~l~TNG 109 (318)
T TIGR03470 81 GEPLLHPEIDEIVRGLVARKKFVYLCTNA 109 (318)
T ss_pred ccccccccHHHHHHHHHHcCCeEEEecCc
Confidence 34557899999999999999999999994
No 269
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=59.10 E-value=7 Score=35.23 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=14.8
Q ss_pred CCceEEEEeccCcccccc
Q 019086 82 PRDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~ 99 (346)
...|++|+|+|+||++..
T Consensus 19 ~~kklLVLDLDeTLvh~~ 36 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHR 36 (195)
T ss_pred CCCcEEEEeCCCceEccc
Confidence 345799999999999853
No 270
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=56.84 E-value=82 Score=32.91 Aligned_cols=38 Identities=11% Similarity=-0.071 Sum_probs=27.1
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
++...|..+++.+-++++++.. +....++.+.+.++++
T Consensus 95 Dil~al~~a~~~~~~iavv~~~--~~~~~~~~~~~~l~~~ 132 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQ--ETIPALVAFQKTFNLR 132 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecC--cccHHHHHHHHHhCCc
Confidence 4556666777778899999875 3356677777777775
No 271
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=56.30 E-value=11 Score=42.19 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCcE-EEEcCChh-hHHHHHHcCCC-EEEec
Q 019086 304 AALRAGAEYAEKPVRNC-FLIAGSQS-GVAGAQRIGMP-CVVMR 344 (346)
Q Consensus 304 ~~~~~~~e~lgv~p~e~-i~VGDs~~-Di~aA~~aG~~-~i~v~ 344 (346)
+|++..+.++|++.+++ ||+||+.+ |++... .|.+ +|+++
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~~tvi~~ 1001 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLHKTVILK 1001 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCceeEEEEe
Confidence 46899999999999999 55999999 988763 4444 66554
No 272
>PLN02580 trehalose-phosphatase
Probab=56.04 E-value=17 Score=36.32 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=12.9
Q ss_pred ceEEEEeccCcccccc
Q 019086 84 DLAVLLEVDGVLVDAY 99 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~ 99 (346)
-.+++||+||||.+..
T Consensus 119 ~~~LfLDyDGTLaPIv 134 (384)
T PLN02580 119 KIALFLDYDGTLSPIV 134 (384)
T ss_pred CeEEEEecCCccCCCC
Confidence 4588999999998643
No 273
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=55.98 E-value=12 Score=34.08 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=20.2
Q ss_pred ceEEEEeccCccccccccccHHHHHHHHHHc
Q 019086 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKL 114 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~~~~~~a~~~~~~~~ 114 (346)
.-.++||+||||...... ..+.+.++++++
T Consensus 11 ~~l~lfdvdgtLt~~r~~-~~~e~~~~l~~l 40 (252)
T KOG3189|consen 11 ETLCLFDVDGTLTPPRQK-VTPEMLEFLQKL 40 (252)
T ss_pred ceEEEEecCCcccccccc-CCHHHHHHHHHH
Confidence 348899999999986554 234445555553
No 274
>PLN02151 trehalose-phosphatase
Probab=55.70 E-value=10 Score=37.30 Aligned_cols=32 Identities=13% Similarity=-0.030 Sum_probs=24.4
Q ss_pred HHHHHHHHcCCCCCc---EEEEcCChhhHHHHHHc
Q 019086 305 ALRAGAEYAEKPVRN---CFLIAGSQSGVAGAQRI 336 (346)
Q Consensus 305 ~~~~~~e~lgv~p~e---~i~VGDs~~Di~aA~~a 336 (346)
|++.+++.++..... .+||||-..|-.|.+.+
T Consensus 273 Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L 307 (354)
T PLN02151 273 ALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL 307 (354)
T ss_pred HHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHH
Confidence 478888888765332 89999999887777654
No 275
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=55.29 E-value=7.7 Score=32.83 Aligned_cols=15 Identities=27% Similarity=0.479 Sum_probs=13.4
Q ss_pred eEEEEeccCcccccc
Q 019086 85 LAVLLEVDGVLVDAY 99 (346)
Q Consensus 85 k~viFDlDGTL~d~~ 99 (346)
+.+++|+||||+.+.
T Consensus 3 ~~lvldld~tl~~~~ 17 (148)
T smart00577 3 KTLVLDLDETLVHST 17 (148)
T ss_pred cEEEEeCCCCeECCC
Confidence 579999999999975
No 276
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=51.67 E-value=90 Score=30.51 Aligned_cols=98 Identities=16% Similarity=0.251 Sum_probs=62.4
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHHHH
Q 019086 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKA 269 (346)
Q Consensus 190 ~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~~~ 269 (346)
+.++.+|+++|+.|.|.+- + ...+..+++.+|++.. .++.. | . ....+-.
T Consensus 17 k~~I~eL~~~GheV~it~R---~-~~~~~~LL~~yg~~y~----~iG~~------------------g-~---~~~~Kl~ 66 (335)
T PF04007_consen 17 KNIIRELEKRGHEVLITAR---D-KDETEELLDLYGIDYI----VIGKH------------------G-D---SLYGKLL 66 (335)
T ss_pred HHHHHHHHhCCCEEEEEEe---c-cchHHHHHHHcCCCeE----EEcCC------------------C-C---CHHHHHH
Confidence 4678899999999988776 2 3567888998888753 22210 0 0 0112233
Q ss_pred hhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh
Q 019086 270 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (346)
Q Consensus 270 ~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~ 328 (346)
.+.+.+.-+.+.+...|||.-+..+++. ...++.-+|.+ +|++-|+..
T Consensus 67 ~~~~R~~~l~~~~~~~~pDv~is~~s~~--------a~~va~~lgiP---~I~f~D~e~ 114 (335)
T PF04007_consen 67 ESIERQYKLLKLIKKFKPDVAISFGSPE--------AARVAFGLGIP---SIVFNDTEH 114 (335)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEecCcHH--------HHHHHHHhCCC---eEEEecCch
Confidence 3445555556666677899888777766 55566667753 566667654
No 277
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=50.70 E-value=9 Score=33.12 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=13.7
Q ss_pred eEEEEeccCccccccc
Q 019086 85 LAVLLEVDGVLVDAYR 100 (346)
Q Consensus 85 k~viFDlDGTL~d~~~ 100 (346)
+.+++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 4799999999998754
No 278
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=50.47 E-value=2.5e+02 Score=28.20 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
|+.+.+++|- .-.-|+|||+.---.+|++..|+.+.|.
T Consensus 414 FerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~ 451 (468)
T KOG3107|consen 414 FERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRIS 451 (468)
T ss_pred HHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeec
Confidence 9999999997 4456779999999999999999998775
No 279
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=50.31 E-value=24 Score=30.96 Aligned_cols=37 Identities=14% Similarity=0.328 Sum_probs=29.3
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHh
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 224 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~l 224 (346)
+.|.+.+.|++|+++|++++++|+ .....+..++..+
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~i~TG---R~~~~~~~~~~~~ 54 (204)
T TIGR01484 18 LSPETIEALERLREAGVKVVLVTG---RSLAEIKELLKQL 54 (204)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHhC
Confidence 456778999999999999999999 4456666666653
No 280
>PRK08005 epimerase; Validated
Probab=48.77 E-value=1.4e+02 Score=27.09 Aligned_cols=24 Identities=8% Similarity=-0.049 Sum_probs=20.7
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
.+...++|+.+|+.|.+.++.=|-
T Consensus 92 ~~~~~~~l~~Ik~~G~k~GlAlnP 115 (210)
T PRK08005 92 VQNPSEILADIRAIGAKAGLALNP 115 (210)
T ss_pred ccCHHHHHHHHHHcCCcEEEEECC
Confidence 356789999999999999998874
No 281
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=48.50 E-value=2e+02 Score=28.03 Aligned_cols=36 Identities=28% Similarity=0.247 Sum_probs=27.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCC---hhhHHHHHHcCCCEEEecC
Q 019086 306 LRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRIGMPCVVMRS 345 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs---~~Di~aA~~aG~~~i~v~~ 345 (346)
++.+.+... =-+++|-+ ..|+..|-..|...|++.+
T Consensus 241 i~~~~e~~~----vpVivdAGIg~~sda~~AmelGadgVL~nS 279 (326)
T PRK11840 241 IRLIVEGAT----VPVLVDAGVGTASDAAVAMELGCDGVLMNT 279 (326)
T ss_pred HHHHHHcCC----CcEEEeCCCCCHHHHHHHHHcCCCEEEEcc
Confidence 677777643 34677765 4799999999999999876
No 282
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=47.55 E-value=27 Score=29.84 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=21.9
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
..+.+.++++.++++|+++.+.||+
T Consensus 73 ~~~~l~~ll~~lk~~Gl~i~l~Tg~ 97 (147)
T TIGR02826 73 NREALLSLLKIFKEKGLKTCLYTGL 97 (147)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC
Confidence 4467889999999999999999995
No 283
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=47.10 E-value=12 Score=32.17 Aligned_cols=19 Identities=21% Similarity=0.468 Sum_probs=15.6
Q ss_pred CceEEEEeccCcccccccc
Q 019086 83 RDLAVLLEVDGVLVDAYRF 101 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~~~~ 101 (346)
+...+|+|+|.||+.+...
T Consensus 5 ~kl~LVLDLDeTLihs~~~ 23 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKD 23 (156)
T ss_pred CceEEEEeCCCCccccccc
Confidence 3458999999999997764
No 284
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=46.15 E-value=1e+02 Score=30.00 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=67.4
Q ss_pred cHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCcchhHHHHHH
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 267 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~~~~~~~~~~ 267 (346)
=.+.+|.+++.+|+.+.|.+- ....+..+++.+|+.... ++..- ++ .-..+
T Consensus 15 fFk~lI~elekkG~ev~iT~r----d~~~v~~LLd~ygf~~~~----Igk~g-------------~~--------tl~~K 65 (346)
T COG1817 15 FFKNLIWELEKKGHEVLITCR----DFGVVTELLDLYGFPYKS----IGKHG-------------GV--------TLKEK 65 (346)
T ss_pred HHHHHHHHHHhCCeEEEEEEe----ecCcHHHHHHHhCCCeEe----ecccC-------------Cc--------cHHHH
Confidence 345788999999999987665 245577889999987532 22110 00 00113
Q ss_pred HHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh
Q 019086 268 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 328 (346)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~ 328 (346)
-..+.+++...-+.+..-||+..+++.|++ ..+.+--+|.+ .|++-|+..
T Consensus 66 l~~~~eR~~~L~ki~~~~kpdv~i~~~s~~--------l~rvafgLg~p---sIi~~D~eh 115 (346)
T COG1817 66 LLESAERVYKLSKIIAEFKPDVAIGKHSPE--------LPRVAFGLGIP---SIIFVDNEH 115 (346)
T ss_pred HHHHHHHHHHHHHHHhhcCCceEeecCCcc--------hhhHHhhcCCc---eEEecCChh
Confidence 345667778888888999999999988888 66676666653 455556553
No 285
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=45.00 E-value=23 Score=33.21 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=39.1
Q ss_pred cCCCCCchhHHHHHHHHHHHHHcCCCC--CcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 291 IDTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 291 i~~p~~~~~~~~~~~~~~~~e~lgv~p--~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
|-||+|....++ |..-++.+|++| .++-||+|.- +--.+|.-.||.+.
T Consensus 79 iiKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVW 129 (279)
T cd00733 79 IIKPSPDNIQEL---YLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVW 129 (279)
T ss_pred EECCCCccHHHH---HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 347777777787 999999999987 5599999985 77788888888754
No 286
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=44.30 E-value=61 Score=28.20 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=24.2
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
...++|.+.++++.+++.|+.+.+.||.
T Consensus 72 EPll~~~l~~li~~~~~~g~~v~i~TNg 99 (191)
T TIGR02495 72 EPTLQAGLPDFLRKVRELGFEVKLDTNG 99 (191)
T ss_pred cccCcHhHHHHHHHHHHCCCeEEEEeCC
Confidence 3446788999999999999999999994
No 287
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=42.60 E-value=25 Score=33.01 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=39.0
Q ss_pred cCCCCCchhHHHHHHHHHHHHHcCCCC--CcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 291 IDTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 291 i~~p~~~~~~~~~~~~~~~~e~lgv~p--~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
|-||+|....++ |..-++.+|++| .++-||+|.- +--.+|.-.||.+.
T Consensus 83 ilKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 133 (283)
T PRK09348 83 ILKPSPDNIQEL---YLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVW 133 (283)
T ss_pred EEcCCCccHHHH---HHHHHHHhCCCccccceeEeecCCCCCcccccccceEEE
Confidence 357778777787 999999999997 4599999985 77778888888654
No 288
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=41.42 E-value=36 Score=33.60 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=40.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecch
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 237 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~ 237 (346)
..-+||+.-|+..|. +.+.|++.|. ...-.+..+++.++...+....++.+
T Consensus 213 f~kRPgvD~FL~~~a-~~yEIVi~ss---e~gmt~~pl~d~lDP~g~IsYkLfr~ 263 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLA-KYYEIVVYSS---EQGMTVFPLLDALDPKGYISYKLFRG 263 (393)
T ss_pred eccCchHHHHHHhhc-ccceEEEEec---CCccchhhhHhhcCCcceEEEEEecC
Confidence 336899999999988 6699999998 55566778999888887666655443
No 289
>PLN02887 hydrolase family protein
Probab=41.05 E-value=37 Score=35.80 Aligned_cols=41 Identities=7% Similarity=0.211 Sum_probs=33.6
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+.+...+.|++++++|++++++|+ .....+..+++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATG---R~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATG---KARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHhCcc
Confidence 3568889999999999999999999 4455667778888865
No 290
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=40.97 E-value=34 Score=33.33 Aligned_cols=41 Identities=24% Similarity=0.499 Sum_probs=29.5
Q ss_pred HHHHHHHc-CC-CCCcEEEEcCCh-hhHHHHH---------------HcCCCEEEecCC
Q 019086 306 LRAGAEYA-EK-PVRNCFLIAGSQ-SGVAGAQ---------------RIGMPCVVMRSR 346 (346)
Q Consensus 306 ~~~~~e~l-gv-~p~e~i~VGDs~-~Di~aA~---------------~aG~~~i~v~~~ 346 (346)
+...++.. +. ++....+|||.+ +|+.+|. .-||..|+|+++
T Consensus 284 l~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 284 LRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred HHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 44444333 33 468899999998 7999996 777888888753
No 291
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=40.23 E-value=30 Score=32.64 Aligned_cols=48 Identities=10% Similarity=0.140 Sum_probs=39.0
Q ss_pred cCCCCCchhHHHHHHHHHHHHHcCCCC--CcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 291 IDTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 291 i~~p~~~~~~~~~~~~~~~~e~lgv~p--~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
|-||+|....++ |..-++.+|++| .++-||+|.- +--.+|.-.||.+.
T Consensus 80 ilKPsP~niQel---YL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 130 (293)
T TIGR00388 80 VIKPSPDNIQEL---YLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVW 130 (293)
T ss_pred EECCCCccHHHH---HHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 347777777777 999999999988 4599999985 77778888888754
No 292
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=38.47 E-value=1.1e+02 Score=30.09 Aligned_cols=24 Identities=4% Similarity=-0.015 Sum_probs=17.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHH
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVA 331 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~ 331 (346)
++..++.+ +|+.|++|.|+..|=.
T Consensus 90 ld~vl~~~--~~~~~i~VsDGaeDE~ 113 (344)
T PF04123_consen 90 LDEVLSKF--DPDSAIVVSDGAEDER 113 (344)
T ss_pred HHHHHHhC--CCCEEEEEecChhhhh
Confidence 44555555 5679999999998843
No 293
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=37.49 E-value=2e+02 Score=22.46 Aligned_cols=27 Identities=7% Similarity=0.008 Sum_probs=21.1
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 318 RNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 318 ~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
..+++.-+.....+..+.+|+..|+.|
T Consensus 90 ~~ii~~~~~~~~~~~l~~~g~d~vi~P 116 (116)
T PF02254_consen 90 IRIIARVNDPENAELLRQAGADHVISP 116 (116)
T ss_dssp SEEEEEESSHHHHHHHHHTT-SEEEEH
T ss_pred CeEEEEECCHHHHHHHHHCCcCEEECc
Confidence 567777788888888999999988754
No 294
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=36.92 E-value=3.3e+02 Score=25.76 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=63.7
Q ss_pred CCCCCCcHHHHHHH---HHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 182 DAPLRPGVEDFVDD---AYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 182 ~~~~~pgv~elL~~---L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...++|+..|+++. |-+.|+.|.-+++ ++..+-..++..|-.- .+..|.-+.+|+
T Consensus 116 ~~~LlPD~~etl~Aae~Lv~eGF~VlPY~~----~D~v~a~rLed~Gc~a------------------VMPlgsPIGSg~ 173 (267)
T CHL00162 116 PKYLLPDPIGTLKAAEFLVKKGFTVLPYIN----ADPMLAKHLEDIGCAT------------------VMPLGSPIGSGQ 173 (267)
T ss_pred CcccCCChHHHHHHHHHHHHCCCEEeecCC----CCHHHHHHHHHcCCeE------------------EeeccCcccCCC
Confidence 45588988888854 5578999999998 2455666666666542 123344444432
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC---hhhHHHHHH
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQR 335 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs---~~Di~aA~~ 335 (346)
- =.+|.. ++.+.+...+ -|++|-+ ..|+..|-.
T Consensus 174 G--------------------------l~n~~~--------------l~~i~e~~~v----pVivdAGIgt~sDa~~AmE 209 (267)
T CHL00162 174 G--------------------------LQNLLN--------------LQIIIENAKI----PVIIDAGIGTPSEASQAME 209 (267)
T ss_pred C--------------------------CCCHHH--------------HHHHHHcCCC----cEEEeCCcCCHHHHHHHHH
Confidence 0 011111 6777776654 3566654 479999999
Q ss_pred cCCCEEEecC
Q 019086 336 IGMPCVVMRS 345 (346)
Q Consensus 336 aG~~~i~v~~ 345 (346)
.|...|++.+
T Consensus 210 lGaDgVL~nS 219 (267)
T CHL00162 210 LGASGVLLNT 219 (267)
T ss_pred cCCCEEeecc
Confidence 9999999876
No 295
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=36.58 E-value=1.7e+02 Score=25.98 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhhccccccCCCCCchhHHH-HHHHHHHHHHcCCCCCcEEEEcCChhhHH---HHHHcCCCEEEec
Q 019086 272 AQKQEIAEEVASMLKLSVDIDTSSPESLDKI-VAALRAGAEYAEKPVRNCFLIAGSQSGVA---GAQRIGMPCVVMR 344 (346)
Q Consensus 272 ~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~-~~~~~~~~e~lgv~p~e~i~VGDs~~Di~---aA~~aG~~~i~v~ 344 (346)
+.|.+...+.....-|+..+..|+....|.. ++.++..++. ..++++++||-|.-+.- .|+..|+++|+|.
T Consensus 14 S~Ka~~l~~~~~~~~~~~~~~~p~l~~~p~~a~~~l~~~i~~--~~~~~~~liGSSlGG~~A~~La~~~~~~avLiN 88 (187)
T PF05728_consen 14 SFKAQALKQYFAEHGPDIQYPCPDLPPFPEEAIAQLEQLIEE--LKPENVVLIGSSLGGFYATYLAERYGLPAVLIN 88 (187)
T ss_pred CHHHHHHHHHHHHhCCCceEECCCCCcCHHHHHHHHHHHHHh--CCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEc
Confidence 3566666676666677777766664444443 2223333333 34566999999987655 4666799998874
No 296
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=35.32 E-value=3.6e+02 Score=24.82 Aligned_cols=42 Identities=7% Similarity=0.026 Sum_probs=31.3
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhC
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 225 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lg 225 (346)
.+..+...++|+++|+.|++.+++=|-. .+-...+.+++.+.
T Consensus 92 ~E~~~~~~r~i~~Ik~~G~kaGv~lnP~-Tp~~~i~~~l~~vD 133 (220)
T COG0036 92 AEATEHIHRTIQLIKELGVKAGLVLNPA-TPLEALEPVLDDVD 133 (220)
T ss_pred eccCcCHHHHHHHHHHcCCeEEEEECCC-CCHHHHHHHHhhCC
Confidence 4467889999999999999999998843 34455556665444
No 297
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=34.95 E-value=41 Score=30.82 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=28.9
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
|...+++++++++|++++++|+ ..-..++.+...+++.
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTG---R~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTG---RSPHSYKELQKQKPLL 61 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcC---CCHHHHHHHHhcCCCC
Confidence 4555888899999999999999 4455666777767764
No 298
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=34.08 E-value=76 Score=23.81 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=28.2
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh
Q 019086 191 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (346)
Q Consensus 191 elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (346)
+++++++++|.++.+..- ...+..+++.+|+.+++.
T Consensus 61 ~l~~~~~~~g~~v~i~~~-----~~~~~~~l~~~gl~~~~~ 96 (99)
T cd07043 61 GAYKRARAAGGRLVLVNV-----SPAVRRVLELTGLDRLFP 96 (99)
T ss_pred HHHHHHHHcCCeEEEEcC-----CHHHHHHHHHhCcceeee
Confidence 667788899988877654 467889999999987654
No 299
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=33.70 E-value=3.4e+02 Score=24.86 Aligned_cols=24 Identities=8% Similarity=-0.057 Sum_probs=20.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
.+...++|+.+|+.|++.++.=|-
T Consensus 96 ~~~~~~~l~~Ir~~g~k~GlalnP 119 (223)
T PRK08745 96 SRHVHRTIQLIKSHGCQAGLVLNP 119 (223)
T ss_pred cccHHHHHHHHHHCCCceeEEeCC
Confidence 356789999999999999999884
No 300
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=33.42 E-value=58 Score=24.65 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=33.9
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 019086 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 294 p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
|...|+-.. ++.++|++++++..+..|-+-..+|.-++.||--
T Consensus 23 pE~aPftAv---lkfaAEeFkv~~~TsAiiTndGvGINP~qtAGnv 65 (82)
T cd01766 23 PESTPFTAV---LKFAAEEFKVPAATSAIITNDGIGINPAQTAGNV 65 (82)
T ss_pred cccCchHHH---HHHHHHhcCCCccceeEEecCccccChhhcccce
Confidence 334444444 8999999999999998888888888888888853
No 301
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=33.25 E-value=50 Score=32.54 Aligned_cols=16 Identities=19% Similarity=0.486 Sum_probs=13.9
Q ss_pred ceEEEEeccCcccccc
Q 019086 84 DLAVLLEVDGVLVDAY 99 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~ 99 (346)
.|+++||.||||+...
T Consensus 2 ~k~l~lDrDgtl~~~~ 17 (354)
T PRK05446 2 QKILFIDRDGTLIEEP 17 (354)
T ss_pred CcEEEEeCCCCccCCC
Confidence 5799999999999863
No 302
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=32.84 E-value=2e+02 Score=27.13 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=31.0
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHH
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 242 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~ 242 (346)
+...+.+.++.+.+++.|-+|-+.|+ ...+..........+++ ++++..-+...
T Consensus 111 ~~~V~d~~ea~~~~~~~~~rVflt~G-----~~~l~~f~~~~~~~~~~-~Rvlp~~~~~~ 164 (257)
T COG2099 111 WIEVADIEEAAEAAKQLGRRVFLTTG-----RQNLAHFVAADAHSHVL-ARVLPPPDVLA 164 (257)
T ss_pred eEEecCHHHHHHHHhccCCcEEEecC-----ccchHHHhcCcccceEE-EEEcCchHHHH
Confidence 44567899999999988855555554 34455555544443332 33444434433
No 303
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=32.83 E-value=54 Score=30.66 Aligned_cols=39 Identities=3% Similarity=-0.076 Sum_probs=28.4
Q ss_pred CCCCcHHHHHHHHHh-CCCCEEEEcCCCCCchhHHHHHHHHhC
Q 019086 184 PLRPGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVEKLG 225 (346)
Q Consensus 184 ~~~pgv~elL~~L~~-~Gi~v~ilTn~~~~~~~~~~~~l~~lg 225 (346)
.+.|.+.+.|+.|.+ .|++++|+|+ .....+..++..++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SG---R~~~~~~~~~~~~~ 75 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISG---RSMVELDALAKPYR 75 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeC---CCHHHHHHhcCccc
Confidence 356888899999998 7999999999 33444555554333
No 304
>KOG4380 consensus Carnitine deficiency associated protein [General function prediction only]
Probab=32.39 E-value=2.5e+02 Score=25.27 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=62.0
Q ss_pred CChHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCch
Q 019086 135 GDEDRMLVLFFNRIGWPTSVPTNEKKAFVKNVLQEKKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGD 214 (346)
Q Consensus 135 g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~ 214 (346)
.....+.+.++.+++.|-+. ..+...++.++........+.-..+.-.+.|.....++..+.+--++.=+--++.++.
T Consensus 54 s~W~~~~EKY~~~~~~P~~~--~~R~~AID~~L~~AV~~~Y~~~~~~~~~~~~~~~K~~~~~~~~~~PL~~LD~~~P~F~ 131 (244)
T KOG4380|consen 54 SDWPKFFEKYLRDVNCPFKI--QDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPLINLDVNNPDFK 131 (244)
T ss_pred ccchHHHHHHHHHcCCCccc--ccHHHHHHHHHHHHHHHHHHhcccchhhhhhhhHHHHHhhhcccCchhhcCCCCccHH
Confidence 34555666788888887432 4444555665543333222222123334689999999998887666665554444667
Q ss_pred hHHHHHHHHhCcccchhhee
Q 019086 215 RIARSVVEKLGSERISKIKI 234 (346)
Q Consensus 215 ~~~~~~l~~lgl~~~f~~~i 234 (346)
..++.+...||+.+.-|..+
T Consensus 132 ~~~~AL~~iL~I~~H~D~~V 151 (244)
T KOG4380|consen 132 AGVMALANLLQIQRHDDYLV 151 (244)
T ss_pred HHHHHHHHHhccccCCCHHH
Confidence 88889999999987666543
No 305
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=32.12 E-value=3.7e+02 Score=25.15 Aligned_cols=98 Identities=23% Similarity=0.304 Sum_probs=57.0
Q ss_pred CCCCCCcHHHHHH---HHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhheecchhhHHHhhhhccccccccccCc
Q 019086 182 DAPLRPGVEDFVD---DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 258 (346)
Q Consensus 182 ~~~~~pgv~elL~---~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~~i~~~~e~~~~~f~~i~~g~~v~~~~ 258 (346)
...++|+..++++ .|-+.|+.|.-.++ ++..+-..++..|-.- .+..|.-+.+|+
T Consensus 102 ~~~L~PD~~etl~Aae~Lv~eGF~VlPY~~----~D~v~akrL~d~Gcaa------------------vMPlgsPIGSg~ 159 (247)
T PF05690_consen 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCT----DDPVLAKRLEDAGCAA------------------VMPLGSPIGSGR 159 (247)
T ss_dssp TTT--B-HHHHHHHHHHHHHTT-EEEEEE-----S-HHHHHHHHHTT-SE------------------BEEBSSSTTT--
T ss_pred CCCcCCChhHHHHHHHHHHHCCCEEeecCC----CCHHHHHHHHHCCCCE------------------EEecccccccCc
Confidence 3457888888885 55688999999998 2455666666667652 133344444432
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC---hhhHHHHHH
Q 019086 259 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQR 335 (346)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs---~~Di~aA~~ 335 (346)
- =-+|. .++.++++.+++ ++|+-+ ++|...|-.
T Consensus 160 G--------------------------i~n~~--------------~l~~i~~~~~vP----vIvDAGiG~pSdaa~AME 195 (247)
T PF05690_consen 160 G--------------------------IQNPY--------------NLRIIIERADVP----VIVDAGIGTPSDAAQAME 195 (247)
T ss_dssp ---------------------------SSTHH--------------HHHHHHHHGSSS----BEEES---SHHHHHHHHH
T ss_pred C--------------------------CCCHH--------------HHHHHHHhcCCc----EEEeCCCCCHHHHHHHHH
Confidence 0 01111 278888898774 345543 589999999
Q ss_pred cCCCEEEecC
Q 019086 336 IGMPCVVMRS 345 (346)
Q Consensus 336 aG~~~i~v~~ 345 (346)
.|+..|+|.+
T Consensus 196 lG~daVLvNT 205 (247)
T PF05690_consen 196 LGADAVLVNT 205 (247)
T ss_dssp TT-SEEEESH
T ss_pred cCCceeehhh
Confidence 9999999854
No 306
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=31.95 E-value=22 Score=32.41 Aligned_cols=35 Identities=11% Similarity=-0.014 Sum_probs=24.6
Q ss_pred HHHHHHHHcCCC---CCcEEEEcCChhhHHHHHHcCCC
Q 019086 305 ALRAGAEYAEKP---VRNCFLIAGSQSGVAGAQRIGMP 339 (346)
Q Consensus 305 ~~~~~~e~lgv~---p~e~i~VGDs~~Di~aA~~aG~~ 339 (346)
|.+.+++.++.. +.-++++||-..|-.|.+.+.-.
T Consensus 169 av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 169 AVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred HHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 478888888765 77899999999999998887654
No 307
>PRK09482 flap endonuclease-like protein; Provisional
Probab=31.89 E-value=8.3 Score=36.25 Aligned_cols=32 Identities=19% Similarity=0.002 Sum_probs=20.8
Q ss_pred HHHHHHcCCCCCc----EEEEcCChhhHHHHHHcCC
Q 019086 307 RAGAEYAEKPVRN----CFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 307 ~~~~e~lgv~p~e----~i~VGDs~~Di~aA~~aG~ 338 (346)
+...+++|+.|++ ..++||+..+|.+..-+|-
T Consensus 157 ~~v~~~~Gv~P~q~~D~~aL~GD~sDnIpGVpGIG~ 192 (256)
T PRK09482 157 PFIEQEFGVEPQQLPDYWGLAGISSSKIPGVAGIGP 192 (256)
T ss_pred HHHHHHhCCCHHHHHHHHHHhCCCccCCCCCCCcCh
Confidence 4455677887766 3478888777766555553
No 308
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=31.50 E-value=67 Score=34.57 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=31.5
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
+...+.|+.|+++|++++++|+ .....+..+++.+|+..
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATG---Rs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSA---KTMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCCC
Confidence 4567889999999999999999 44566778888888753
No 309
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=31.32 E-value=70 Score=29.09 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=23.1
Q ss_pred CCCCCc-HHHHHHHHHhCCCCEEEEcCC
Q 019086 183 APLRPG-VEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 183 ~~~~pg-v~elL~~L~~~Gi~v~ilTn~ 209 (346)
..++++ +.++++.++++|+.+++.||.
T Consensus 49 Pllq~~fl~~l~~~~k~~gi~~~leTnG 76 (213)
T PRK10076 49 VLMQAEFATRFLQRLRLWGVSCAIETAG 76 (213)
T ss_pred HHcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 445666 689999999999999999994
No 310
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=29.44 E-value=36 Score=30.28 Aligned_cols=17 Identities=24% Similarity=0.284 Sum_probs=14.7
Q ss_pred ceEEEEeccCccccccc
Q 019086 84 DLAVLLEVDGVLVDAYR 100 (346)
Q Consensus 84 ~k~viFDlDGTL~d~~~ 100 (346)
.++|++|-||||.....
T Consensus 5 ~k~lflDRDGtin~d~~ 21 (181)
T COG0241 5 QKALFLDRDGTINIDKG 21 (181)
T ss_pred CcEEEEcCCCceecCCC
Confidence 67999999999997555
No 311
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=28.90 E-value=1e+02 Score=29.92 Aligned_cols=46 Identities=15% Similarity=0.172 Sum_probs=31.5
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+..-++|++.++++.+++.|+.+.+.||...-.++.++.+. ..|++
T Consensus 62 GEPll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~L~-~~g~~ 107 (358)
T TIGR02109 62 GEPLARPDLVELVAHARRLGLYTNLITSGVGLTEARLDALA-DAGLD 107 (358)
T ss_pred ccccccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHHHH-hCCCC
Confidence 34557899999999999999999999994322233444333 34554
No 312
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=28.77 E-value=1.9e+02 Score=28.64 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCccc
Q 019086 189 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 228 (346)
Q Consensus 189 v~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~ 228 (346)
..+.+..|+++|++|+++|.. .+-..+..||+..
T Consensus 33 l~~~ia~L~~~G~eVilVSSG------AiaaG~~~Lg~~~ 66 (369)
T COG0263 33 LVRQVAALHKAGHEVVLVSSG------AIAAGRTRLGLPK 66 (369)
T ss_pred HHHHHHHHHhCCCEEEEEccc------hhhhChhhcCCCC
Confidence 347778999999999999982 3445666777764
No 313
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=28.76 E-value=48 Score=30.51 Aligned_cols=28 Identities=14% Similarity=0.221 Sum_probs=24.4
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
..-++++..++++.+++.|+++.+.||.
T Consensus 82 EPll~~~l~~li~~l~~~g~~v~leTNG 109 (238)
T TIGR03365 82 NPALQKPLGELIDLGKAKGYRFALETQG 109 (238)
T ss_pred chhhhHhHHHHHHHHHHCCCCEEEECCC
Confidence 3446688999999999999999999994
No 314
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=28.59 E-value=4.5e+02 Score=23.88 Aligned_cols=37 Identities=8% Similarity=-0.024 Sum_probs=26.1
Q ss_pred CCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHH
Q 019086 185 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE 222 (346)
Q Consensus 185 ~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~ 222 (346)
..+...++|+.+|+.|++.++.-|-. .+-+.+..+++
T Consensus 91 a~~~~~~~l~~ik~~g~k~GlalnP~-Tp~~~i~~~l~ 127 (220)
T PRK08883 91 ASEHVDRTLQLIKEHGCQAGVVLNPA-TPLHHLEYIMD 127 (220)
T ss_pred CcccHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHH
Confidence 34568899999999999999998843 23343444444
No 315
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=28.50 E-value=67 Score=25.71 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=21.4
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
.+.+.+.++.++++|.+++.+|+.
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~ 82 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNV 82 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECC
Confidence 467889999999999999999994
No 316
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=28.39 E-value=60 Score=28.76 Aligned_cols=24 Identities=4% Similarity=-0.057 Sum_probs=12.6
Q ss_pred HHHHHHcCCCCCcEEEEcCChhhH
Q 019086 307 RAGAEYAEKPVRNCFLIAGSQSGV 330 (346)
Q Consensus 307 ~~~~e~lgv~p~e~i~VGDs~~Di 330 (346)
..-+.++|++++++.+.||---|.
T Consensus 161 a~r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 161 AERFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp HHHHHTTT-S--SEEE---GGG--
T ss_pred HHHHHHcCCCcceEEEeCcchhcc
Confidence 344778999999999999977665
No 317
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=28.18 E-value=1e+02 Score=23.78 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=29.2
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchhh
Q 019086 191 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 232 (346)
Q Consensus 191 elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~~ 232 (346)
++.+.++++|.++.++.- ...+..+++.+|+...+..
T Consensus 66 ~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~~l~~~~~i 102 (108)
T TIGR00377 66 GRYKQVRRVGGQLVLVSV-----SPRVARLLDITGLLRIIPI 102 (108)
T ss_pred HHHHHHHhcCCEEEEEeC-----CHHHHHHHHHhChhheecc
Confidence 556678889999888765 5778899999999886654
No 318
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=27.94 E-value=58 Score=26.16 Aligned_cols=24 Identities=17% Similarity=0.350 Sum_probs=21.8
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
.+.+.+.++.++++|.+++.+|+.
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~ 83 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGN 83 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCC
Confidence 478899999999999999999994
No 319
>smart00475 53EXOc 5'-3' exonuclease.
Probab=27.79 E-value=6.4 Score=37.02 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=23.7
Q ss_pred HHHHHHHcCCCCCc----EEEEcCChhhHHHHHHcCC
Q 019086 306 LRAGAEYAEKPVRN----CFLIAGSQSGVAGAQRIGM 338 (346)
Q Consensus 306 ~~~~~e~lgv~p~e----~i~VGDs~~Di~aA~~aG~ 338 (346)
.+.+.+++|++|++ ++++||+..+|.+...+|.
T Consensus 160 ~~~v~~~~Gv~p~q~~d~~aL~GD~sDnipGV~GIG~ 196 (259)
T smart00475 160 PENVIEKYGLTPEQIIDYKALMGDSSDNIPGVPGIGE 196 (259)
T ss_pred HHHHHHHhCcCHHHHHHHHHHhCCcccCCCCCCCCCH
Confidence 45556788999887 7789988777766555554
No 320
>COG2237 Predicted membrane protein [Function unknown]
Probab=27.66 E-value=1.7e+02 Score=28.87 Aligned_cols=20 Identities=15% Similarity=0.305 Sum_probs=14.2
Q ss_pred HHHHHHHHhCC--CCEEEEcCC
Q 019086 190 EDFVDDAYNEG--IPLIVLTAY 209 (346)
Q Consensus 190 ~elL~~L~~~G--i~v~ilTn~ 209 (346)
...-++||++| +.|+++|+.
T Consensus 54 lkiydeLk~~geDveIA~vsG~ 75 (364)
T COG2237 54 LKIYDELKAKGEDVEIAVVSGD 75 (364)
T ss_pred HHHHHHHhccCCceEEEEEecC
Confidence 35567777775 778888883
No 321
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=27.23 E-value=52 Score=28.69 Aligned_cols=35 Identities=23% Similarity=0.184 Sum_probs=29.3
Q ss_pred CCCchhHHHHHHHHHHHHH---cCCCCCcEEEEcCChh
Q 019086 294 SSPESLDKIVAALRAGAEY---AEKPVRNCFLIAGSQS 328 (346)
Q Consensus 294 p~~~~~~~~~~~~~~~~e~---lgv~p~e~i~VGDs~~ 328 (346)
+-+....++.++|+.+.+. +|.++++++++|||.-
T Consensus 44 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAG 81 (211)
T PF07859_consen 44 PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAG 81 (211)
T ss_dssp STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHH
T ss_pred cccccccccccceeeeccccccccccccceEEeecccc
Confidence 3467778888889888887 7999999999999974
No 322
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=26.86 E-value=1.2e+02 Score=23.48 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccchh
Q 019086 191 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 231 (346)
Q Consensus 191 elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f~ 231 (346)
.+.++++++|.++.++.- ...+..+++..|+.+.+.
T Consensus 62 ~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 62 GRYKKIKNEGGEVIVCNV-----SPAVKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHcCCEEEEEeC-----CHHHHHHHHHhCCceEEE
Confidence 556778889999988754 578899999999988763
No 323
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=26.85 E-value=1.1e+02 Score=25.71 Aligned_cols=14 Identities=0% Similarity=0.119 Sum_probs=12.0
Q ss_pred CCceEEEEeccCcc
Q 019086 82 PRDLAVLLEVDGVL 95 (346)
Q Consensus 82 ~~~k~viFDlDGTL 95 (346)
+.+..|+|||.+||
T Consensus 43 ~~P~iV~FDmK~Tl 56 (128)
T PRK13717 43 NAPVTAAFNMKQTV 56 (128)
T ss_pred CCCeEEEEehHHHH
Confidence 45679999999998
No 324
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=26.78 E-value=3e+02 Score=27.03 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=26.2
Q ss_pred CCCCCCcHHHHHHHHHhCC-CCEEEEcCCCC
Q 019086 182 DAPLRPGVEDFVDDAYNEG-IPLIVLTAYGK 211 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~G-i~v~ilTn~~~ 211 (346)
.-+++|||..+.+.|.+.| .++.-+||+.+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw 224 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPW 224 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChh
Confidence 3568999999999999998 99999999654
No 325
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.72 E-value=38 Score=34.86 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=14.3
Q ss_pred CCCceEEEEeccCcccc
Q 019086 81 PPRDLAVLLEVDGVLVD 97 (346)
Q Consensus 81 ~~~~k~viFDlDGTL~d 97 (346)
....|++++|+||||+-
T Consensus 219 g~~kK~LVLDLDNTLWG 235 (574)
T COG3882 219 GKSKKALVLDLDNTLWG 235 (574)
T ss_pred CcccceEEEecCCcccc
Confidence 34578999999999985
No 326
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=26.53 E-value=3.7e+02 Score=24.65 Aligned_cols=23 Identities=22% Similarity=0.392 Sum_probs=19.9
Q ss_pred CcHHHHHHHHHhCCCCEEEEcCC
Q 019086 187 PGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 187 pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
....++++.++++|++.+++-|.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p 138 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSP 138 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECC
Confidence 57788999999999999998873
No 327
>PF03671 Ufm1: Ubiquitin fold modifier 1 protein; InterPro: IPR005375 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade. There are many different E3 ligases, which are responsible for the type of ubiquitin chain formed, the specificity of the target protein, and the regulation of the ubiquitinylation process []. Ubiquitinylation is an important regulatory tool that controls the concentration of key signalling proteins, such as those involved in cell cycle control, as well as removing misfolded, damaged or mutant proteins that could be harmful to the cell. Several ubiquitin-like molecules have been discovered, such as Ufm1 (IPR005375 from INTERPRO), SUMO1 (IPR003653 from INTERPRO), NEDD8, Rad23 (IPR004806 from INTERPRO), Elongin B and Parkin (IPR003977 from INTERPRO), the latter being involved in Parkinson's disease []. Ubiquitin-like molecules (UBLs) can be divided into two subclasses: type-1 UBLs, which ligate to target proteins in a manner similar, but not identical, to the ubiquitylation pathway, such as SUMO, NEDD8, and UCRP/ISG15, and type-2 UBLs (also called UDPs, ubiquitin-domain proteins), which contain ubiquitin-like structure embedded in a variety of different classes of large proteins with apparently distinct functions, such as Rad23, Elongin B, Scythe, Parkin, and HOIL-1. This entry represents Ufm1 (ubiquitin-fold modifier), which is a ubiquitin-like protein with structural similarities to ubiquitin [, ]. Ufm1 is one of a number of ubiquitin-like modifiers that conjugate to target proteins in cells through Uba5 (E1) and Ufc1 (E2). The Ufm1-system is conserved in metazoa and plants, suggesting it has a potential role in multicellular organisms []. Human Ufm1 is synthesized as a precursor consisting of 85 amino-acid residues. Prior to activation by Uba5, the extra amino acids at the C-terminal region of Ufm1 are removed to expose Gly, which is necessary for conjugation to target molecule(s). C-terminal processing of Ufm1 requires two specific cysteine peptidases (IPR012462 from INTERPRO): UfSP1 and UfSP2; both peptidases are also able to release Ufm1 from Ufm1-conjugated cellular proteins. UfSP2 is present in most, if not all, of multi-cellular organisms including plant, nematode, fly, and mammal, whereas UfSP1 is not present in plants and nematodes []. For further information on ubiquitin, please see Protein of the Month [].; PDB: 1J0G_A 1WXS_A 1L7Y_A.
Probab=26.40 E-value=21 Score=26.85 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=25.8
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 019086 294 SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 334 (346)
Q Consensus 294 p~~~~~~~~~~~~~~~~e~lgv~p~e~i~VGDs~~Di~aA~ 334 (346)
|...|+.+. ++.++|++.+++..+..|-+...+|.-.+
T Consensus 23 PE~apftaV---lkfaAeeF~vp~~tsaiItndG~GInP~Q 60 (76)
T PF03671_consen 23 PEEAPFTAV---LKFAAEEFKVPPATSAIITNDGVGINPQQ 60 (76)
T ss_dssp ETTSBHHHH---HHHHHHHTTS-SSSEEEEESSS-EE-TTS
T ss_pred CCCCchHHH---HHHHHHHcCCCCceEEEEecCCcccccch
Confidence 445556665 99999999999999988876655544433
No 328
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=26.30 E-value=1.2e+02 Score=29.58 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=31.7
Q ss_pred CCCCCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 181 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 181 ~~~~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
+..-++|++.++++.+++.|+.+.+.||...-.++.++. +...|++
T Consensus 71 GEPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~~-L~~~g~~ 116 (378)
T PRK05301 71 GEPLLRKDLEELVAHARELGLYTNLITSGVGLTEARLAA-LKDAGLD 116 (378)
T ss_pred CccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHHH-HHHcCCC
Confidence 445578999999999999999999999943212333433 3344554
No 329
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=26.28 E-value=2.6e+02 Score=27.16 Aligned_cols=25 Identities=28% Similarity=0.559 Sum_probs=19.3
Q ss_pred EEEEcCChhhHH-HHHHcCCCEEEecC
Q 019086 320 CFLIAGSQSGVA-GAQRIGMPCVVMRS 345 (346)
Q Consensus 320 ~i~VGDs~~Di~-aA~~aG~~~i~v~~ 345 (346)
.++||||. +|. -|-..|.++|.++.
T Consensus 260 ~~vvgdSs-GI~eEa~~lg~P~v~iR~ 285 (346)
T PF02350_consen 260 DLVVGDSS-GIQEEAPSLGKPVVNIRD 285 (346)
T ss_dssp SEEEESSH-HHHHHGGGGT--EEECSS
T ss_pred eEEEEcCc-cHHHHHHHhCCeEEEecC
Confidence 46799999 888 99999999999843
No 330
>PRK10537 voltage-gated potassium channel; Provisional
Probab=25.85 E-value=6.5e+02 Score=25.11 Aligned_cols=34 Identities=6% Similarity=0.009 Sum_probs=23.2
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEec
Q 019086 310 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 310 ~e~lgv~p~e~i~VGDs~~Di~aA~~aG~~~i~v~ 344 (346)
++.++ +.-+++..-+...+.+..+.+|...+..+
T Consensus 323 ar~l~-p~~kIIa~v~~~~~~~~L~~~GaD~VIsp 356 (393)
T PRK10537 323 AKEMS-SDVKTVAAVNDSKNLEKIKRVHPDMIFSP 356 (393)
T ss_pred HHHhC-CCCcEEEEECCHHHHHHHHhcCCCEEECH
Confidence 45555 22356666666777888888998887654
No 331
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=25.18 E-value=72 Score=29.90 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=36.4
Q ss_pred CCCCCchhHHHHHHHHHHHHHcCCCC--CcEEEEcCCh-hhHHHHHHcCCCEE
Q 019086 292 DTSSPESLDKIVAALRAGAEYAEKPV--RNCFLIAGSQ-SGVAGAQRIGMPCV 341 (346)
Q Consensus 292 ~~p~~~~~~~~~~~~~~~~e~lgv~p--~e~i~VGDs~-~Di~aA~~aG~~~i 341 (346)
-||+|+...++ |..-++.+|++| .++=||+|.- +--.+|.-.||.+.
T Consensus 85 lKPsP~NiQeL---YL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWEVW 134 (298)
T COG0752 85 IKPSPDNIQEL---YLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWEVW 134 (298)
T ss_pred ecCCCccHHHH---HHHHHHHcCCChhhcceeeeccCCCCCcccccccceeEE
Confidence 47777777777 999999999998 4589999985 55667777777643
No 332
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=24.59 E-value=1.2e+02 Score=29.65 Aligned_cols=38 Identities=24% Similarity=0.194 Sum_probs=31.3
Q ss_pred CCCchhHHHHHHHHHHHHH----cCCCCCcEEEEcCCh-hhHH
Q 019086 294 SSPESLDKIVAALRAGAEY----AEKPVRNCFLIAGSQ-SGVA 331 (346)
Q Consensus 294 p~~~~~~~~~~~~~~~~e~----lgv~p~e~i~VGDs~-~Di~ 331 (346)
|-|..+++.+.|+.++.+. .++++++|++.|||. -+|.
T Consensus 138 ~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia 180 (336)
T KOG1515|consen 138 PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIA 180 (336)
T ss_pred CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHH
Confidence 4588889999999988874 799999999999997 3553
No 333
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=24.45 E-value=46 Score=36.44 Aligned_cols=15 Identities=20% Similarity=0.390 Sum_probs=13.0
Q ss_pred ceEEEEeccCccccc
Q 019086 84 DLAVLLEVDGVLVDA 98 (346)
Q Consensus 84 ~k~viFDlDGTL~d~ 98 (346)
.++++||+||||++.
T Consensus 507 ~rll~LDyDGTL~~~ 521 (797)
T PLN03063 507 NRLLILGFYGTLTEP 521 (797)
T ss_pred CeEEEEecCccccCC
Confidence 469999999999964
No 334
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=24.20 E-value=1.2e+02 Score=27.44 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=7.9
Q ss_pred EEeccCccccccc
Q 019086 88 LLEVDGVLVDAYR 100 (346)
Q Consensus 88 iFDlDGTL~d~~~ 100 (346)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6999999998543
No 335
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.18 E-value=70 Score=23.52 Aligned_cols=22 Identities=27% Similarity=0.356 Sum_probs=19.9
Q ss_pred CCcHHHHHHHHHhCCCCEEEEc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLT 207 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilT 207 (346)
.+.+.++++.++++|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 4779999999999999999887
No 336
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=23.83 E-value=1.1e+02 Score=29.38 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=28.6
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.||+..+-+.|+..|.++.|+|.. .....++..++.+++.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~--~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDE--RCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECH--HHHHHHHHHHHHHhhC
Confidence 489999999999999999999983 1233444444455553
No 337
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=23.48 E-value=46 Score=37.11 Aligned_cols=16 Identities=13% Similarity=0.349 Sum_probs=13.4
Q ss_pred CceEEEEeccCccccc
Q 019086 83 RDLAVLLEVDGVLVDA 98 (346)
Q Consensus 83 ~~k~viFDlDGTL~d~ 98 (346)
+.++++||+||||++.
T Consensus 590 ~~RLlfLDyDGTLap~ 605 (934)
T PLN03064 590 NNRLLILGFNATLTEP 605 (934)
T ss_pred cceEEEEecCceeccC
Confidence 3469999999999974
No 338
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=23.43 E-value=5.9e+02 Score=23.44 Aligned_cols=22 Identities=9% Similarity=0.150 Sum_probs=19.3
Q ss_pred cHHHHHHHHHhCCCCEEEEcCC
Q 019086 188 GVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn~ 209 (346)
...++|+.+|+.|++.+|.=|-
T Consensus 96 ~~~~~i~~Ik~~G~kaGlalnP 117 (229)
T PRK09722 96 QAFRLIDEIRRAGMKVGLVLNP 117 (229)
T ss_pred hHHHHHHHHHHcCCCEEEEeCC
Confidence 5678999999999999998874
No 339
>KOG0391 consensus SNF2 family DNA-dependent ATPase [General function prediction only]
Probab=23.40 E-value=1.7e+02 Score=33.89 Aligned_cols=20 Identities=15% Similarity=0.307 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCCEEEEcCC
Q 019086 190 EDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 190 ~elL~~L~~~Gi~v~ilTn~ 209 (346)
.=+|++|+.+|+++-|+|-.
T Consensus 1266 AiLLqQLk~eghRvLIfTQM 1285 (1958)
T KOG0391|consen 1266 AILLQQLKSEGHRVLIFTQM 1285 (1958)
T ss_pred HHHHHHHHhcCceEEehhHH
Confidence 34789999999999999973
No 340
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=23.36 E-value=58 Score=23.81 Aligned_cols=25 Identities=0% Similarity=-0.134 Sum_probs=15.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 019086 306 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 334 (346)
Q Consensus 306 ~~~~~e~lgv~p~e~i~VGDs~~Di~aA~ 334 (346)
.+..++++|+ .|++||..+|+++.+
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5677888988 899999999998865
No 341
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=23.25 E-value=1.2e+02 Score=27.72 Aligned_cols=28 Identities=29% Similarity=0.299 Sum_probs=23.1
Q ss_pred CCCCCCc-HHHHHHHHHhCCCCEEEEcCC
Q 019086 182 DAPLRPG-VEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 182 ~~~~~pg-v~elL~~L~~~Gi~v~ilTn~ 209 (346)
...++++ +.++++.+++.|+++++.||.
T Consensus 80 EPll~~~~~~~l~~~~k~~g~~i~l~TNG 108 (246)
T PRK11145 80 EAILQAEFVRDWFRACKKEGIHTCLDTNG 108 (246)
T ss_pred cHhcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3446777 469999999999999999994
No 342
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=23.25 E-value=1.4e+02 Score=26.93 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=23.1
Q ss_pred CCCCCCc-HHHHHHHHHhCCCCEEEEcCC
Q 019086 182 DAPLRPG-VEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 182 ~~~~~pg-v~elL~~L~~~Gi~v~ilTn~ 209 (346)
...++|+ +.++++.+++.|+++.+.||.
T Consensus 75 EPll~~~~~~~li~~~~~~g~~~~i~TNG 103 (235)
T TIGR02493 75 EPLLQPEFLSELFKACKELGIHTCLDTSG 103 (235)
T ss_pred ccccCHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 3446777 459999999999999999993
No 343
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=22.43 E-value=1.1e+02 Score=24.01 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=29.6
Q ss_pred HHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcccch
Q 019086 190 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 230 (346)
Q Consensus 190 ~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~~~f 230 (346)
.++.+.++.+|+++.++.- ...+...++.+|+...+
T Consensus 70 ~~~~~~~~~~g~~~~l~~~-----~~~v~~~l~~~~~~~~~ 105 (117)
T PF01740_consen 70 VDIIKELRRRGVQLVLVGL-----NPDVRRILERSGLIDFI 105 (117)
T ss_dssp HHHHHHHHHTTCEEEEESH-----HHHHHHHHHHTTGHHHS
T ss_pred HHHHHHHHHCCCEEEEEEC-----CHHHHHHHHHcCCChhc
Confidence 3677889999999988754 67888999999998765
No 344
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=22.28 E-value=3.6e+02 Score=24.84 Aligned_cols=24 Identities=0% Similarity=-0.208 Sum_probs=20.4
Q ss_pred CCcHHHHHHHHHhCCC--CEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGI--PLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi--~v~ilTn~ 209 (346)
.+...++|+.+|+.|. +.++.=|-
T Consensus 102 ~~~~~~~l~~Ik~~g~~~kaGlalnP 127 (228)
T PRK08091 102 THDLALTIEWLAKQKTTVLIGLCLCP 127 (228)
T ss_pred cccHHHHHHHHHHCCCCceEEEEECC
Confidence 4568899999999999 99998773
No 345
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=22.22 E-value=74 Score=30.06 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=32.4
Q ss_pred CCCCcHHHHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCc
Q 019086 184 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 226 (346)
Q Consensus 184 ~~~pgv~elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl 226 (346)
..+|++.+||..+-+. +.+++.|+ +...++..+++.|.-
T Consensus 131 ~kRP~vdeFL~~~s~~-~e~v~FTA---s~~~Ya~~v~D~LD~ 169 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKW-YELVLFTA---SLEVYADPLLDILDP 169 (262)
T ss_pred EcCCCHHHHHHHhHHH-HHHHHHHh---hhHHHHHHHHHHccC
Confidence 3678999999888877 88888888 668888888888876
No 346
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=21.85 E-value=1.3e+02 Score=24.12 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=20.8
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTA 208 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn 208 (346)
.+.+.+.++.++++|.+++.+|+
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~ 78 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITS 78 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeC
Confidence 46788999999999999999997
No 347
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=21.68 E-value=1.6e+02 Score=29.68 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=24.5
Q ss_pred CCCCCCcHHHHHHHHHhCCCCEEEE-cCC
Q 019086 182 DAPLRPGVEDFVDDAYNEGIPLIVL-TAY 209 (346)
Q Consensus 182 ~~~~~pgv~elL~~L~~~Gi~v~il-Tn~ 209 (346)
..-++|.+.++++.+++.|+++++. ||.
T Consensus 84 epl~~~~l~eLl~~lk~~gi~taI~~TnG 112 (404)
T TIGR03278 84 DVSCYPELEELTKGLSDLGLPIHLGYTSG 112 (404)
T ss_pred ccccCHHHHHHHHHHHhCCCCEEEeCCCC
Confidence 4557899999999999999999995 984
No 348
>PF01381 HTH_3: Helix-turn-helix; InterPro: IPR001387 This is large family of DNA binding helix-turn helix proteins that include a bacterial plasmid copy control protein, bacterial methylases, various bacteriophage transcription control proteins and a vegetative specific protein from Dictyostelium discoideum (Slime mould).; GO: 0043565 sequence-specific DNA binding; PDB: 2AXU_A 2AWI_D 2AXV_D 2AXZ_C 2AW6_A 3KXA_C 3BS3_A 2CRO_A 1ZUG_A 3CRO_R ....
Probab=21.50 E-value=46 Score=22.57 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=26.3
Q ss_pred HHHhhHHHHHHHHHHHHhhccccccCCCCCchhHHHHHHHHHHHHHcCCCCC
Q 019086 267 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 318 (346)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~KP~p~i~~p~~~~~~~~~~~~~~~~e~lgv~p~ 318 (346)
++..+..++.|.....+.+.|+++. ...+++.+|++++
T Consensus 16 a~~~gis~~~i~~~~~g~~~~~~~~--------------~~~ia~~l~~~~~ 53 (55)
T PF01381_consen 16 AEKLGISRSTISRIENGKRNPSLDT--------------LKKIAKALGVSPE 53 (55)
T ss_dssp HHHHTS-HHHHHHHHTTSSTSBHHH--------------HHHHHHHHTSEHH
T ss_pred HHHhCCCcchhHHHhcCCCCCCHHH--------------HHHHHHHHCCCHH
Confidence 4445556666666666667788777 8888999998754
No 349
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=21.48 E-value=8e+02 Score=24.29 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=22.4
Q ss_pred HcCCCCCcEEEEcCC--hhhHHHHHHcCCCEEEe
Q 019086 312 YAEKPVRNCFLIAGS--QSGVAGAQRIGMPCVVM 343 (346)
Q Consensus 312 ~lgv~p~e~i~VGDs--~~Di~aA~~aG~~~i~v 343 (346)
.+|+++++++|-|-. ..+++.|...|+.++.+
T Consensus 75 ~~G~~~~~Iif~gp~K~~~~l~~a~~~Gv~~i~v 108 (394)
T cd06831 75 ELGVSPENIIYTNPCKQASQIKYAAKVGVNIMTC 108 (394)
T ss_pred hcCCCcCCEEEeCCCCCHHHHHHHHHCCCCEEEE
Confidence 567778877777764 35777777777766544
No 350
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.45 E-value=1.6e+02 Score=22.31 Aligned_cols=21 Identities=14% Similarity=0.400 Sum_probs=18.7
Q ss_pred cHHHHHHHHHhCCCCEEEEcC
Q 019086 188 GVEDFVDDAYNEGIPLIVLTA 208 (346)
Q Consensus 188 gv~elL~~L~~~Gi~v~ilTn 208 (346)
...++++.|+++|+++.++|.
T Consensus 54 ~~~~i~~~L~~~G~~~~~~~~ 74 (85)
T cd04906 54 ELAELLEDLKSAGYEVVDLSD 74 (85)
T ss_pred HHHHHHHHHHHCCCCeEECCC
Confidence 388999999999999998887
No 351
>COG2044 Predicted peroxiredoxins [General function prediction only]
Probab=21.09 E-value=1.2e+02 Score=25.09 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=23.5
Q ss_pred CCCCCcHHHHHHHHHhCCCCEEEEcC
Q 019086 183 APLRPGVEDFVDDAYNEGIPLIVLTA 208 (346)
Q Consensus 183 ~~~~pgv~elL~~L~~~Gi~v~ilTn 208 (346)
.+.+|-+.+++++++++|+++.+|.-
T Consensus 58 ~~~~~~l~~~~~~a~e~GVk~yvCe~ 83 (120)
T COG2044 58 HPNFPPLEELIKQAIEAGVKIYVCEQ 83 (120)
T ss_pred CCCCCCHHHHHHHHHHcCCEEEEEcc
Confidence 35679999999999999999999987
No 352
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.98 E-value=1.1e+02 Score=24.70 Aligned_cols=24 Identities=21% Similarity=0.061 Sum_probs=21.6
Q ss_pred CCcHHHHHHHHHhCCCCEEEEcCC
Q 019086 186 RPGVEDFVDDAYNEGIPLIVLTAY 209 (346)
Q Consensus 186 ~pgv~elL~~L~~~Gi~v~ilTn~ 209 (346)
.+.+.+.++.++++|.+++.+|+.
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~ 83 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDD 83 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECC
Confidence 478889999999999999999994
No 353
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=20.95 E-value=1.4e+02 Score=24.08 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCCEEEEcCCCCCchhHHHHHHHHhCcc
Q 019086 191 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 227 (346)
Q Consensus 191 elL~~L~~~Gi~v~ilTn~~~~~~~~~~~~l~~lgl~ 227 (346)
.+-++|+++|++|.++|. ... +..++..|++
T Consensus 17 ala~~L~~rGh~V~~~~~-----~~~-~~~v~~~Gl~ 47 (139)
T PF03033_consen 17 ALARALRRRGHEVRLATP-----PDF-RERVEAAGLE 47 (139)
T ss_dssp HHHHHHHHTT-EEEEEET-----GGG-HHHHHHTT-E
T ss_pred HHHHHHhccCCeEEEeec-----ccc-eecccccCce
Confidence 567899999999999998 333 4444888987
No 354
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.23 E-value=5.9e+02 Score=25.48 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=25.5
Q ss_pred HHHHHHHhCC-CC-EEEEcCCCCCch--hHHHHHHHHhCcc-cchhh
Q 019086 191 DFVDDAYNEG-IP-LIVLTAYGKSGD--RIARSVVEKLGSE-RISKI 232 (346)
Q Consensus 191 elL~~L~~~G-i~-v~ilTn~~~~~~--~~~~~~l~~lgl~-~~f~~ 232 (346)
.++.++.+.+ +. ++++|+. +. +....+++.+++. +-++.
T Consensus 21 pli~~~~~~~~~~~~vi~TGQ---H~d~em~~~~le~~~i~~pdy~L 64 (383)
T COG0381 21 PLVKALEKDPDFELIVIHTGQ---HRDYEMLDQVLELFGIRKPDYDL 64 (383)
T ss_pred HHHHHHHhCCCCceEEEEecc---cccHHHHHHHHHHhCCCCCCcch
Confidence 4566777764 43 5567773 34 7788888888887 44443
No 355
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=20.13 E-value=23 Score=33.47 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=15.1
Q ss_pred CCceEEEEeccCcccccc
Q 019086 82 PRDLAVLLEVDGVLVDAY 99 (346)
Q Consensus 82 ~~~k~viFDlDGTL~d~~ 99 (346)
...|.+++|+|+||+.+.
T Consensus 87 ~~kk~lVLDLDeTLvHss 104 (262)
T KOG1605|consen 87 VGRKTLVLDLDETLVHSS 104 (262)
T ss_pred CCCceEEEeCCCcccccc
Confidence 456799999999998766
No 356
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=20.12 E-value=7.1e+02 Score=23.19 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=13.5
Q ss_pred hhHHHHHHcCCCEEEec
Q 019086 328 SGVAGAQRIGMPCVVMR 344 (346)
Q Consensus 328 ~Di~aA~~aG~~~i~v~ 344 (346)
.=+++|++.|+++|+|.
T Consensus 214 eKi~AA~~lgi~vivI~ 230 (256)
T TIGR00715 214 EKVKAAEALGINVIRIA 230 (256)
T ss_pred HHHHHHHHcCCcEEEEe
Confidence 45788888888888875
Done!