BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019087
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 4/138 (2%)
Query: 206 KDAPSIKHVWRIENFSKLRSECCDSQVFNSGDQKWKIQLYPKGRRHGTGTHLAMYLALAD 265
+D P++K W I NFS+ + S VF G KW+I ++PKG HL+MYL ++D
Sbjct: 50 EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSD 106
Query: 266 SATLTPGSKIYAEFTVRLLDQVQARHIAGK-ANFWFSASNPESGWARYVSFAYFNNPGNG 324
+A+L G YA+F++ +++Q+ R+ K F+A + G+ ++ + +P G
Sbjct: 107 AASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRG 166
Query: 325 CLVKDVCSVEAEVTVHGV 342
LV D VEAEV V V
Sbjct: 167 YLVNDTVLVEAEVAVRKV 184
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 10/137 (7%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSS 115
+T I +FS + + K+ + F GGYKW+++++P GN NV +H+S+YL +++ +S
Sbjct: 57 FTWTIPNFS---RQNTRKHYSDVFVVGGYKWRILIFPKGN---NV-DHLSMYLDVSDAAS 109
Query: 116 LQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLKLEWGFDEFIPIKAFNDASNG 175
L GW YA F L +++Q + + ++ + +F+ + +WGF F+P+ D S G
Sbjct: 110 LPYGWSRYAQFSLAVVNQIHTRYTVRKET---QHQFNARESDWGFTSFMPLSELYDPSRG 166
Query: 176 FLLEDTCVFGAEVFVCK 192
+L+ DT + AEV V K
Sbjct: 167 YLVNDTVLVEAEVAVRK 183
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 206 KDAPSIKHVWRIENFSKLRSECCDSQVFNSGDQKWKIQLYPKGRRHGTGTHLAMYLALAD 265
+D PS+K W I F++L + S VF G KW+I ++PKG HL+MYL +AD
Sbjct: 49 EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVAD 105
Query: 266 SATLTPGSKIYAEFTVRLLDQVQARH-IAGKANFWFSASNPESGWARYVSFAYFNNPGNG 324
+A L G Y++F++ +++QV R+ I + F+A + G+ ++ + P G
Sbjct: 106 AANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRG 165
Query: 325 CLVKDVCSVEAEVTVHGV 342
LV D +EAEV V V
Sbjct: 166 YLVNDTVLIEAEVAVRKV 183
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 62 SFSLLLKTSVEKYETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQLGWE 121
+ + + + K+ + F GGYKW+++++P GN NV +H+S+YL +A+ ++L GW
Sbjct: 59 TIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGN---NV-DHLSMYLDVADAANLPYGWS 114
Query: 122 VYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLKLEWGFDEFIPIKAFNDASNGFLLEDT 181
Y+ F L +++Q + + I ++ + +F+ + +WGF F+P+ + + G+L+ DT
Sbjct: 115 RYSQFSLAVVNQVNNRYSIRKET---QHQFNARESDWGFTSFMPLSELYEPTRGYLVNDT 171
Query: 182 CVFGAEVFVCK 192
+ AEV V K
Sbjct: 172 VLIEAEVAVRK 182
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 50 GASPTHYTVKINSFSLLLKTSVEKYE-TGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVY 107
G+ P+ K N++++ + + K E GD FE GGYKW +++YP G +V H+S++
Sbjct: 61 GSKPSQLFGK-NTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGC---DVCNHLSLF 116
Query: 108 LAMANTSSLQLGWEVYAVFRLFLLDQNKD-NFLILQDAMGAERRFHRLKLEWGFDEFIPI 166
L +A+ L GW +A F + + NKD D + RF + + +WG+ +FI +
Sbjct: 117 LCVAHHEKLLPGWSHFAQFTIAV--SNKDPKKSKHSDTL---HRFWKKEHDWGWKKFIEL 171
Query: 167 KAFNDASNGFLLEDTCV-FGAEVFVCKERSTGKGECL 202
+ GF+ + C+ A+V V +ER CL
Sbjct: 172 PKLKE---GFIDDSGCLTIKAQVQVIRERVDRPFRCL 205
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 212 KHVWRIENFSKLRSECCDSQVFNSGDQKWKIQLYPKGRRHGTGTHLAMYLALADSATLTP 271
K+ W IE FS + VF G KW I +YP+G HL+++L +A L P
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQG--CDVCNHLSLFLCVAHHEKLLP 127
Query: 272 GSKIYAEFTVRL--LDQVQARHIAGKANFWFSASNPESGWARYVSFAYFNN---PGNGCL 326
G +A+FT+ + D +++H FW + GW +++ +GCL
Sbjct: 128 GWSHFAQFTIAVSNKDPKKSKHSDTLHRFWKKEH--DWGWKKFIELPKLKEGFIDDSGCL 185
Query: 327 VKDVCSVEAEVTV 339
+++A+V V
Sbjct: 186 -----TIKAQVQV 193
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 13/145 (8%)
Query: 59 KINSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQ 117
KI+ +SL+ + KY D F GGY W + YP G ++ ++S+++A+A+
Sbjct: 38 KISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFIALASE---- 93
Query: 118 LGWEVYAVFRLFLLDQNKDNFLILQDAMG--AERRFHRLKLE---WGFDEFIPIKAFNDA 172
G +V A+F L L+DQ+ + + G E + LK WG+ F
Sbjct: 94 -GADVRALFELTLVDQSGNERHKVHSHFGRTLESGPYTLKYRGSMWGYKRFFKRSLLE-- 150
Query: 173 SNGFLLEDTCVFGAEVFVCKERSTG 197
S+ +L ++ + V V K R+ G
Sbjct: 151 SSDYLKDNGLLVRCCVGVVKSRTEG 175
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 45 ALSISGASPTHYTVKINSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEH 103
+LS++ ++ I +SL + K+ D F GGY+W + YP G ++ +
Sbjct: 38 SLSVTQTINGSHSFTIKGYSLAKGIGIGKHIASDTFTVGGYQWAIYFYPDGKNPEDNSAY 97
Query: 104 ISVYLAMANTSSLQLGWEVYAVFRLFLLDQN 134
+SV++A+A+ G +V A+F L LLDQ+
Sbjct: 98 VSVFIALASD-----GTDVRALFELSLLDQS 123
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 230 SQVFNSGDQKWKIQLYPKGRR-HGTGTHLAMYLALADSATLTPGSKIYAEFTVRLLDQ 286
S F G +W I YP G+ ++++++ALA + G+ + A F + LLDQ
Sbjct: 70 SDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALA-----SDGTDVRALFELSLLDQ 122
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 59 KINSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQ 117
KI +SL V KY D F GGY W + YP G ++ ++S+++A+A+
Sbjct: 39 KICGYSLAKGVGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALASE---- 94
Query: 118 LGWEVYAVFRLFLLDQNKDNFLILQDAMG--AERRFHRLKLE---WGFDEFIPIKAFNDA 172
G +V A+F L L+DQ+ + + G + + LK WG+ F +
Sbjct: 95 -GADVRALFELTLVDQSGNGKHKVHSHFGRALDSGPYTLKYRGSMWGYKRFFRRSSLE-- 151
Query: 173 SNGFLLEDTCVFGAEVFVCKERSTG 197
S+ +L E++ + V V K + G
Sbjct: 152 SSDYLKENSLLVRCRVGVVKSVTEG 176
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 60 INSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQL 118
I +SL S K+ D F GGY W + YP G ++ +IS+++A+A+ S+
Sbjct: 31 IQGYSLAKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDSN--- 87
Query: 119 GWEVYAVFRLFLLDQNKDNFLILQDAM--GAERRFHRLKLE---WGFDEFIPIKAFNDAS 173
++ A+F L L+DQ+ + E + LK + WG+ F A +
Sbjct: 88 --DIRALFELTLMDQSGKGKHKVHSHFDRALEGGPYTLKYKGSMWGYKRFFKRSALE--T 143
Query: 174 NGFLLEDTCVFGAEVFVCKERSTGKGECLSMIKDAPSIKHVWRIENFSKLRSECCDSQV- 232
+ +L +D V V V + R G + V + N + + DS+V
Sbjct: 144 SDYLKDDCLVINCTVGVVRARLEGPKQ----------YGIVLPLSNMGQGLKDLLDSEVG 193
Query: 233 ----FNSGDQKWK 241
F GD+ +K
Sbjct: 194 CDIAFQVGDETYK 206
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 230 SQVFNSGDQKWKIQLYPKGRR-HGTGTHLAMYLALADSATLTPGSKIYAEFTVRLLDQ 286
S +F+ G W I YP G+ +++++++ALA + + I A F + L+DQ
Sbjct: 48 SDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDS-----NDIRALFELTLMDQ 100
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 60 INSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQL 118
I +SL + K+ D F GGY+W + YP G ++ ++SV++A+A+
Sbjct: 35 IQGYSLAKGMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALASE----- 89
Query: 119 GWEVYAVFRLFLLDQN 134
G EV A+F L L+DQ+
Sbjct: 90 GTEVRALFELALVDQS 105
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 60 INSFSLLLKTSVEKYETGD-FEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQL 118
I +SL V K+ D F GGY+W + +YP G ++ ++SV++ +A+ +
Sbjct: 42 IQGYSLAKGIGVGKHIASDNFSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVLASECT--- 98
Query: 119 GWEVYAVFRLFLLDQN 134
EV A+F L L+DQ+
Sbjct: 99 --EVRALFELSLVDQS 112
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 55 HYTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAGNKSKNVKEHISVYLAMA 111
+Y IN+FS + E ++ F AG KW L + P G ++ ++++S+YL +
Sbjct: 97 NYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEES-RDYLSLYLLLV 155
Query: 112 NTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAER--RFHRLKLEWGFDEFIPIKAF 169
+ EV A F+ +L+ ++ AM ++R RF + K +WGF +FI
Sbjct: 156 QCNK----SEVRAKFKFSILNAKREE----TKAMESQRAYRFVQGK-DWGFKKFIRRDFL 206
Query: 170 NDASNGFLLEDTCVFGAEVFVCKE--RSTGKGECLSMIKDAP 209
D +NG L D EV V E TG+ + K P
Sbjct: 207 LDEANGLLPGDRLSIFCEVSVVAETVNVTGQTNVSQLFKVPP 248
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 213 HVWRIENFSKLRSECCD---SQVFNSG---DQKWKIQLYPKGRRHGTGTHLAMYLALADS 266
++W I NFS R E + S F++G KW +++ PKG + +L++YL L
Sbjct: 98 YMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLLVQC 157
Query: 267 ATLTPGSKIYAEFTVRLLD--QVQARHIAGKANFWFSASNPESGWARYVSFAYFNNPGNG 324
S++ A+F +L+ + + + + + + F + G+ +++ + + NG
Sbjct: 158 NK----SEVRAKFKFSILNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 212
Query: 325 CLVKDVCSVEAEVTV 339
L D S+ EV+V
Sbjct: 213 LLPGDRLSIFCEVSV 227
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 118/284 (41%), Gaps = 38/284 (13%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMAN--T 113
+ + IN+FS +++ + F G W+ Y G K + +S++++ +
Sbjct: 1028 WIISINNFS----NRKDQFYSPIFSLIGSNWRCKFYSNG-KDASTSGKLSIFISNCDLLN 1082
Query: 114 SSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLKLEWGFDEFIPIKAFNDAS 173
+ + E ++L L++Q N I + + F + G+ FI + + + +
Sbjct: 1083 NPFTIFLEKSISYKLTLINQKNPNESIQKSS---SHTFSIKEFNHGYGSFIGLFSLLNPN 1139
Query: 174 NGFLLEDTCVFGAE-------VFVCKERSTGKGECLSMIKDAPSIKHVWRIENFSKLRSE 226
NGFL+ +T + V + + G + S + + SK +SE
Sbjct: 1140 NGFLVNNTIKVRIDAAPTSPLVNTYDKYNIGLNQAFS-----------YSVPMMSK-KSE 1187
Query: 227 CCDSQVFNSGDQKWKIQLYPKGRRHGTGTHLAMYLALADSATLTPGSKIYAEFTVRLLDQ 286
S +F S +KW I++YP G+ + +++++L D F++ L+ Q
Sbjct: 1188 PFISPIFMSCGRKWIIKIYPMGQP--SSNYMSVFLEYRDEGEEN------VHFSLELISQ 1239
Query: 287 VQARH-IAGKANFWFSASNPESGWARYVSFAYFNNPGNGCLVKD 329
+ I + F++ + G+ +++ + +P G LV D
Sbjct: 1240 LYPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLVND 1283
Score = 38.9 bits (89), Expect = 0.058, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 56 YTVKIN---SFSL-LLKTSVEKYETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMA 111
Y + +N S+S+ ++ E + + F + G KW + +YP G S N ++SV+L
Sbjct: 1167 YNIGLNQAFSYSVPMMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSN---YMSVFLEYR 1223
Query: 112 NTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLKLEWGFDEFIPIKAFND 171
+ + + + + +L+ K + RF+ +G+ +FI + D
Sbjct: 1224 DEGEENVHFSLELISQLYPEQSIK---------YWVQYRFNSKSNSFGYPKFIGVSTLMD 1274
Query: 172 ASNGFLLEDTCVFGAEVFVCK 192
GFL+ DT + + K
Sbjct: 1275 PDMGFLVNDTIILNVSILQLK 1295
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 25/187 (13%)
Query: 19 PQPQCTCITTNSVRNFAATGDEIDRFALSISGASPTHYTVKINSFSLLLKTSVEKYETGD 78
P P + T N+ T ++ +F+ Y IN+FS + E ++
Sbjct: 462 PSPPLPEVNTPVAENWCYTQVKVVKFS----------YMWTINNFSFCREEMGEVLKSST 511
Query: 79 FEAGG---YKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQLGWEVYAVFRLFLLDQNK 135
F AG KW L + P G ++ L ++ S EV A F+ +L+ +
Sbjct: 512 FSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKS-----EVRAKFKFSILNAKR 566
Query: 136 DNFLILQDAMGAER--RFHRLKLEWGFDEFIPIKAFNDASNGFLLEDTCVFGAEVFVCKE 193
+ AM ++R RF + K +WGF +FI D +NG L ED EV V +
Sbjct: 567 EE----TKAMESQRAYRFVQGK-DWGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVAD 621
Query: 194 RSTGKGE 200
G+
Sbjct: 622 SVNISGQ 628
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G ++SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ LL+ ++ AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGEC-LSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK 180
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 213 HVWRIENFSKLRSECCD---SQVFNSG---DQKWKIQLYPKGRRHGTGTHLAMYLALADS 266
++W I NFS R E + S F+SG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 267 ATLTPGSKIYAEFTVRLLD--QVQARHIAGKANFWFSASNPESGWARYVSFAYFNNPGNG 324
P S++ A+F LL+ + + + + + + F + G+ +++ + + NG
Sbjct: 90 LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 148
Query: 325 CLVKDVCSVEAEVTV 339
L D ++ EV+V
Sbjct: 149 LLPDDKLTLFCEVSV 163
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 27/185 (14%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G ++SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ LL+ ++ AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSLLNDKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGECLSMIKDAPSIK------HVWRIENFSKL 223
D +NG L +D EV V ++ G + P + ++W F
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNVSGHTSTNTLKVPECRLAEDLGNLWENTRF--- 199
Query: 224 RSECC 228
++CC
Sbjct: 200 -TDCC 203
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSG---DQKWKIQLYPKGRRHGTG 254
C + +K ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQVK-VVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQVQARHIAGKANFWFS-ASNPESGWARYV 313
+L++YL P S++ A+F LL+ + A ++ + + G+ +++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKFI 137
Query: 314 SFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + NG L D ++ EV+V
Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E + F +G KW L + P G ++SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ LL+ ++ AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE 200
D +NG L +D EV V ++ G+
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQ 173
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 13/135 (9%)
Query: 213 HVWRIENFSKLRSECCD---SQVFNSG---DQKWKIQLYPKGRRHGTGTHLAMYLALADS 266
++W I NFS R E + S F+SG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 267 ATLTPGSKIYAEFTVRLLD--QVQARHIAGKANFWFSASNPESGWARYVSFAYFNNPGNG 324
P S++ A+F LL+ + + + + + + F + G+ +++ + + NG
Sbjct: 90 LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 148
Query: 325 CLVKDVCSVEAEVTV 339
L D ++ EV+V
Sbjct: 149 LLPDDKLTLFCEVSV 163
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G ++SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ LL+ ++ AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKE 193
D +NG L +D EV V ++
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQD 166
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSG---DQKWKIQLYPKGRRHGTG 254
C + +K ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQVK-VVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLD--QVQARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F LL+ + + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 73 KYETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSL-QLGWEVYAVFRLFLL 131
KY + F G ++W ++L+P GN +K V +VYL L + E+ V
Sbjct: 56 KYNSPRFRIGDFEWDILLFPQGNHNKGV----AVYLEPHPEEKLDETTGEMVPV------ 105
Query: 132 DQNKDNFLILQDAMGAER---------------RFHRLKLEWGFDEFIPIKAFNDASNG- 175
+ D + Q A+G R RF+ L +WGF I + S G
Sbjct: 106 --DPDWYCCAQFAIGISRPGNGDTINLINKSHHRFNALDTDWGFANLIDLNNLKHPSKGR 163
Query: 176 ---FLLEDTCVFGAEVFVCKE 193
FL E T A V + K+
Sbjct: 164 PLSFLNEGTLNITAYVRILKD 184
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 17/151 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAG---GYKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + + E ++ F +G KW L + P G ++SK+ + ++
Sbjct: 34 YMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
EV A F+ LL+ + AM ++R + ++ +WGF ++I
Sbjct: 94 PKN-------EVRAKFKFSLLNSKNEE----TKAMESQRAYRFVQGKDWGFKKYIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE 200
D +NG L +D EV V ++ G+
Sbjct: 143 LDEANGLLPDDKLTLYCEVSVVQDSINISGQ 173
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 213 HVWRIENFSKLRSECCD---SQVFNSGDQ---KWKIQLYPKGRRHGTGTHLAMYLALADS 266
++W I NFS R E + S F+SG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 267 ATLTPGSKIYAEFTVRLLDQVQARHIAGKANFWFS-ASNPESGWARYVSFAYFNNPGNGC 325
P +++ A+F LL+ A ++ + + G+ +Y+ + + NG
Sbjct: 90 LVSCPKNEVRAKFKFSLLNSKNEETKAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGL 149
Query: 326 LVKDVCSVEAEVTV 339
L D ++ EV+V
Sbjct: 150 LPDDKLTLYCEVSV 163
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSECCD---SQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E + S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)
Query: 56 YTVKINSFSLLLKTSVEKYETGDFEAGG---YKWKLVLYPAG--NKSKNVKEHISVYLAM 110
Y IN+FS + E ++ F +G KW L + P G +SK+ + ++
Sbjct: 34 YMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSC 93
Query: 111 ANTSSLQLGWEVYAVFRLFLLDQNKDNFLILQDAMGAERRFHRLK-LEWGFDEFIPIKAF 169
+ EV A F+ +L+ + AM ++R + ++ +WGF +FI
Sbjct: 94 PKS-------EVRAKFKFSILNAKGEE----TKAMESQRAYRFVQGKDWGFKKFIRRDFL 142
Query: 170 NDASNGFLLEDTCVFGAEVFVCKERSTGKGE-CLSMIK 206
D +NG L +D EV V ++ G+ ++M+K
Sbjct: 143 LDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 201 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFNSGDQ---KWKIQLYPKGRRHGTG 254
C + IK ++W I NFS R E S F+SG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 255 THLAMYLALADSATLTPGSKIYAEFTVRLLDQV--QARHIAGKANFWFSASNPESGWARY 312
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 313 VSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ + + NG L D ++ EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q94420|MEL26_CAEEL Protein maternal effect lethal 26 OS=Caenorhabditis elegans
GN=mel-26 PE=1 SV=2
Length = 395
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 211 IKHVWRIENFSKLRSECCDSQVF-NSGDQK--WKIQLYPKG 248
++H W ++NFS E ++ V+ GD++ W I++YPKG
Sbjct: 42 VQHTWTVKNFSHCYQEYLENFVYLQRGDEQLTWSIKIYPKG 82
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 204 MIKDAPSIKHVWRIENFSKLRSE---CCDSQVFNSGDQKWKIQLYPKGRRHGTGTHLAMY 260
+I K VW I+NFSK + + S V G + + LYP G + + L++Y
Sbjct: 297 LISKQEKFKSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSNS-LSLY 355
Query: 261 LALADSATLTPGSKIYAEFTVRL 283
L LT G K + F++ +
Sbjct: 356 LV------LTKGEKTFVNFSISI 372
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 233 FNSGDQKWKIQLYPKGRRHGTGTHLAMYLALADSATLTPGSKIYAEFTVRLLDQVQARHI 292
FNS +K+ + +P G ++++YL L +++ I +F+ +++ + I
Sbjct: 319 FNS--RKYNVSCFPNGFTPANKDYISLYLHLHEAS-----PNINIKFSFEIVNSDPTKSI 371
Query: 293 AGKANFWFSASNPESGWARYVSFAYFNNPGNGCLVKDVCSVEAEVTV 339
+ N +F ++ GW ++ N G G +V + +++ E+ +
Sbjct: 372 KKEKNSYFQ-NDKGIGWEKFAECKTINTLGEGFVVGNKLTIKFEIEI 417
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 205 IKDAPSIKHVWRIENFSKLRSECCDSQVFNSGDQKWKIQLYPKG 248
+++A + W ++NFS L + S +F +G W+I L+PKG
Sbjct: 46 LEEAAHASYSWVVKNFSTLEDKTY-SPLFKAGHTTWRIVLFPKG 88
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 233 FNSGDQKWKIQLYPKGRRHGTGTHLAMYLALADSATLTPGSKIYAEFTVRLLDQVQARHI 292
F GD ++ ++L+P G+ T +L+++L + P + FTV D ++ H+
Sbjct: 73 FGDGDYEFVMKLFPNGKDEETAGYLSLFLLINKCP--NPRLRFRVSFTVETADGPRSCHL 130
Query: 293 AGKANFWFSASNPESGWARYVSFAYFNNPGNGCLVKDVCSVEAEVTVHG 341
N + +++ S + N + D+ ++ E+T+ G
Sbjct: 131 --NKNLVTINRSGIVTASKFFSLDILRSAMNVYIPNDILTIGCELTIFG 177
>sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40 OS=Caenorhabditis elegans
GN=bath-40 PE=1 SV=1
Length = 402
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 86 WKLVLYPAGNKSKNVKEHISVYLAMANTSSLQLGWEVYAVFRLFLLDQNKD 136
W+L LYP G + +N ++S++L M+ TS + + A +R + LD N +
Sbjct: 81 WQLCLYPGGKREENAN-NVSLFLKMSATSPSK-EVVLKAEYRFYFLDDNDE 129
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 14/124 (11%)
Query: 195 STGKGECLSMIKDAPSIKHVWRIENFSKLRS-----ECCDSQVFNSG---DQKWKIQLYP 246
++ K EC++ + + W + NF L C S VF D W++ LYP
Sbjct: 29 TSQKNECMTN-PGSIVLTQRWTVCNFESLLKLSRPGSCLRSTVFKDDAVPDACWQLCLYP 87
Query: 247 KGRRHGTGTHLAMYLALADSATLTPGSKIY--AEFTVRLLDQVQARHIAGKANFWFSASN 304
G+R +++++L + SAT +P ++ AE+ LD + F A
Sbjct: 88 GGKREENANNVSLFLKM--SAT-SPSKEVVLKAEYRFYFLDDNDEPKFSNVNVGEFHAKP 144
Query: 305 PESG 308
P+ G
Sbjct: 145 PKGG 148
>sp|B0UQR1|RLMN_METS4 Dual-specificity RNA methyltransferase RlmN OS=Methylobacterium sp.
(strain 4-46) GN=rlmN PE=3 SV=1
Length = 431
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 218 ENFSKLRSECCDSQVFNSGDQKWKIQLYPKGRR-HGTGTHL-AMYLALADSATLTPGSKI 275
E ++ R E QV G +KW +++ P GR H G + +Y+ D TL S++
Sbjct: 97 EAYTLDRPEVVSEQVSRDGTRKWLLRMPPTGRHDHNRGAEIECVYIPANDRGTLCVSSQV 156
Query: 276 YAEFT 280
T
Sbjct: 157 GCTLT 161
>sp|B1M1U6|RLMN_METRJ Dual-specificity RNA methyltransferase RlmN OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=rlmN PE=3 SV=2
Length = 424
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 218 ENFSKLRSECCDSQVFNSGDQKWKIQLYPKGRR-HGTGTHL-AMYLALADSATLTPGSKI 275
E+F+ R E QV G +KW +++ P R+ H G + +Y+ D TL S++
Sbjct: 91 EHFTLERPEVASRQVSRDGTRKWLLRMAPTNRQEHNRGAEIECVYIPGPDRGTLCVSSQV 150
Query: 276 YAEFT 280
T
Sbjct: 151 GCTLT 155
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 75 ETGDFEAGGYKWKLVLYPAGNKSKNVKEHISVYLAMANTSSLQLGWEVYAVFRLFLLDQN 134
E+ +F G K+K+ YP G S K+ +S+YL + Q +V F L D
Sbjct: 335 ESPEFMVGNLKFKIQFYPNGGLSDESKDFLSIYLYKFDD---QTPSKVQFSFELLNKDFT 391
Query: 135 KDNFLILQDAMGAERRFHRLKLEWGFDEFIPIKAFNDASNGFLLEDTCVFGAEVFVCKE 193
++ L + E + WG+ FI + GF+++++ + + E
Sbjct: 392 RNRKLASTNIFHTENK-------WGWRSFIN-NSLVTTQTGFVIQNSVTLNINIEILPE 442
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,688,897
Number of Sequences: 539616
Number of extensions: 5428074
Number of successful extensions: 9095
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 9033
Number of HSP's gapped (non-prelim): 74
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)