Query 019088
Match_columns 346
No_of_seqs 243 out of 1662
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:42:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.7E-44 5.7E-49 346.1 22.8 253 66-343 8-296 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 6.5E-45 2.2E-49 344.6 18.4 218 76-341 51-282 (370)
3 1b5f_A Protein (cardosin A); h 100.0 1.1E-44 3.9E-49 323.1 17.5 216 77-340 9-238 (239)
4 2x0b_A Renin; hydrolase-hormon 100.0 1.1E-44 3.8E-49 343.9 18.0 215 77-340 57-291 (383)
5 2apr_A Rhizopuspepsin; hydrola 100.0 1.5E-43 5E-48 330.0 19.8 217 78-342 12-242 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-42 5.8E-47 326.2 20.6 217 77-341 19-251 (351)
7 3cms_A Chymosin B; hydrolase, 100.0 9.5E-43 3.3E-47 324.3 18.5 215 77-340 10-238 (323)
8 1mpp_A Pepsin; hydrolase(acid 100.0 2.6E-42 8.8E-47 326.2 21.8 218 77-341 14-260 (361)
9 1am5_A Pepsin, acid proteinase 100.0 1.5E-42 5.1E-47 323.1 19.2 216 77-341 8-237 (324)
10 4aa9_A Chymosin; hydrolase, as 100.0 1.3E-42 4.3E-47 323.1 18.6 217 77-341 7-236 (320)
11 1j71_A Candidapepsin, aspartic 100.0 4.2E-42 1.4E-46 321.4 20.6 215 79-342 10-242 (334)
12 3c9x_A Trichoderma reesei aspa 100.0 9.9E-43 3.4E-47 324.9 16.4 215 78-339 12-240 (329)
13 1dpj_A Proteinase A; proteinas 100.0 4.6E-42 1.6E-46 320.5 20.8 214 77-340 9-240 (329)
14 1htr_B Gastricsin; aspartyl pr 100.0 7.6E-42 2.6E-46 319.0 22.0 217 78-341 9-240 (329)
15 1oew_A Endothiapepsin; hydrola 100.0 1.8E-42 6.1E-47 323.2 17.4 212 79-338 13-238 (329)
16 1qdm_A Prophytepsin; aspartic 100.0 1.5E-42 5.1E-47 337.9 17.4 217 77-340 48-281 (478)
17 2qzx_A Candidapepsin-5; aspart 100.0 1.1E-41 3.7E-46 319.7 21.3 215 79-342 10-242 (342)
18 3k1w_A Renin; protease, altern 100.0 6.1E-42 2.1E-46 321.2 19.3 215 77-341 14-249 (341)
19 3aup_A SBG7S, BG, basic 7S glo 100.0 3.2E-41 1.1E-45 323.1 23.9 249 68-342 11-289 (403)
20 3pvk_A Candidapepsin-2; hydrol 100.0 2.8E-41 9.5E-46 316.8 21.7 216 79-342 10-242 (342)
21 3fv3_A SAPP1P-secreted asparti 100.0 5.2E-41 1.8E-45 314.6 23.0 208 79-342 10-244 (339)
22 1miq_A Plasmepsin; aspartic pr 100.0 4E-41 1.4E-45 319.2 19.3 209 77-340 58-284 (375)
23 3lpj_A Beta-secretase 1; alzhe 100.0 1.6E-40 5.4E-45 323.0 23.8 220 79-342 72-314 (455)
24 3qvc_A Histo-aspartic protease 100.0 4.8E-41 1.6E-45 324.6 17.6 210 77-341 133-360 (451)
25 2qp8_A Beta-secretase 1; BACE1 100.0 4.7E-40 1.6E-44 314.3 23.8 219 79-342 19-261 (395)
26 2ewy_A Beta-secretase 2; BACE2 100.0 2.3E-40 7.9E-45 315.2 21.4 220 79-342 11-250 (383)
27 1yg9_A Aspartic protease BLA G 100.0 1.1E-40 3.9E-45 311.1 18.1 212 77-341 13-242 (330)
28 3vf3_A Beta-secretase 1; struc 100.0 1.3E-39 4.4E-44 312.0 25.1 220 79-342 26-268 (402)
29 2bju_A Plasmepsin II; aspartic 100.0 7.4E-41 2.5E-45 323.0 15.5 211 77-340 134-360 (453)
30 1ibq_A Aspergillopepsin; aspar 100.0 7.9E-40 2.7E-44 304.8 17.3 210 79-339 12-235 (325)
31 1t6e_X Xylanase inhibitor; two 100.0 2.7E-39 9.4E-44 307.5 21.4 234 77-343 10-260 (381)
32 1izd_A Aspartic proteinase; su 100.0 1.9E-39 6.3E-44 302.0 17.8 209 79-339 13-235 (323)
33 1bxo_A Protein (penicillopepsi 100.0 1.8E-39 6.3E-44 302.1 13.4 207 79-338 13-233 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 4.5E-38 1.6E-42 294.7 19.7 198 80-341 11-235 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 1.8E-23 6.1E-28 159.0 8.5 84 77-190 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 3.4E-21 1.1E-25 171.4 13.1 131 201-341 5-149 (241)
37 1fmb_A EIAV protease; hydrolas 86.7 0.65 2.2E-05 34.6 3.9 26 84-111 10-35 (104)
38 2hs1_A HIV-1 protease; ultra-h 86.6 0.8 2.8E-05 33.7 4.3 28 84-113 10-37 (99)
39 2i1a_A DNA damage-inducible pr 85.7 0.69 2.4E-05 36.6 3.9 31 79-111 23-53 (148)
40 3ec0_A Protease; HIV-2, inhibi 83.8 1.3 4.5E-05 32.6 4.3 27 84-112 10-36 (99)
41 3liy_A Protease; hydrolase, hy 82.4 1.1 3.9E-05 33.7 3.5 31 84-114 12-45 (116)
42 3s8i_A Protein DDI1 homolog 1; 79.9 1.5 5.1E-05 34.9 3.7 31 80-112 22-52 (148)
43 2i1a_A DNA damage-inducible pr 78.4 2.1 7.2E-05 33.6 4.2 35 284-334 25-59 (148)
44 2hah_A Protease, retropepsin; 78.4 1.9 6.5E-05 32.7 3.6 25 84-111 16-40 (116)
45 3s8i_A Protein DDI1 homolog 1; 77.9 1.6 5.4E-05 34.7 3.3 34 285-334 24-57 (148)
46 3sqf_A Protease; folded monome 74.0 3.3 0.00011 31.2 3.9 28 84-113 11-38 (114)
47 3slz_A GAG-Pro-POL polyprotein 68.4 5.3 0.00018 31.0 4.1 29 82-112 22-50 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 62.9 6.2 0.00021 33.0 3.7 26 84-111 10-35 (203)
49 2rsp_A RSV protease; hydrolase 60.8 7.6 0.00026 29.7 3.6 23 89-113 27-49 (124)
50 1lya_A Cathepsin D; lysosomal 57.5 7.6 0.00026 28.1 3.0 39 277-329 5-44 (97)
51 1bxo_A Protein (penicillopepsi 49.4 15 0.00052 32.7 4.3 38 275-329 7-44 (323)
52 1wkr_A Polyporopepsin; hydrola 49.0 14 0.00046 33.2 3.9 38 277-328 5-42 (340)
53 1ibq_A Aspergillopepsin; aspar 49.0 16 0.00056 32.5 4.4 38 275-329 6-43 (325)
54 1izd_A Aspartic proteinase; su 48.6 16 0.00055 32.5 4.3 38 275-329 7-44 (323)
55 1fmb_A EIAV protease; hydrolas 48.5 11 0.00037 27.9 2.5 33 286-331 6-38 (104)
56 3fv3_A SAPP1P-secreted asparti 48.1 12 0.00041 33.5 3.4 38 277-328 5-42 (339)
57 1j71_A Candidapepsin, aspartic 47.7 12 0.00042 33.5 3.4 38 277-328 5-42 (334)
58 2hs1_A HIV-1 protease; ultra-h 47.2 11 0.00037 27.6 2.3 30 286-328 6-35 (99)
59 2hah_A Protease, retropepsin; 45.9 13 0.00045 28.0 2.7 30 285-328 11-40 (116)
60 2qzx_A Candidapepsin-5; aspart 45.3 14 0.00047 33.2 3.4 38 277-328 5-42 (342)
61 3ec0_A Protease; HIV-2, inhibi 43.8 14 0.00049 26.9 2.5 30 285-327 5-34 (99)
62 3pvk_A Candidapepsin-2; hydrol 41.2 18 0.0006 32.4 3.4 38 277-328 5-42 (342)
63 3slz_A GAG-Pro-POL polyprotein 39.7 23 0.0008 27.3 3.3 26 290-328 24-49 (132)
64 3c9x_A Trichoderma reesei aspa 39.1 31 0.0011 30.7 4.7 32 282-329 13-46 (329)
65 3ka2_A [L-Ala51;Gly51']HIV-1 p 38.6 26 0.0009 29.1 3.7 26 84-111 114-139 (203)
66 1oew_A Endothiapepsin; hydrola 37.4 37 0.0013 30.2 4.9 32 282-329 13-46 (329)
67 1mpp_A Pepsin; hydrolase(acid 33.7 34 0.0012 30.8 4.0 40 274-329 7-49 (361)
68 2apr_A Rhizopuspepsin; hydrola 33.6 37 0.0013 30.1 4.2 31 282-328 13-45 (325)
69 1htr_B Gastricsin; aspartyl pr 32.1 31 0.0011 30.6 3.5 39 277-329 5-43 (329)
70 3cms_A Chymosin B; hydrolase, 30.6 43 0.0015 29.6 4.2 41 275-329 4-45 (323)
71 1b5f_A Protein (cardosin A); h 30.0 43 0.0015 28.2 3.8 31 81-111 188-226 (239)
72 3aup_A SBG7S, BG, basic 7S glo 29.9 34 0.0012 31.4 3.4 40 276-329 11-52 (403)
73 1yg9_A Aspartic protease BLA G 28.9 33 0.0011 30.6 3.0 31 283-329 16-46 (330)
74 1am5_A Pepsin, acid proteinase 25.0 61 0.0021 28.6 4.1 16 314-329 28-43 (324)
75 1tzs_A Cathepsin E; hydrolase, 24.9 42 0.0014 30.1 3.0 39 277-329 15-54 (351)
76 1lya_B Cathepsin D; lysosomal 22.4 73 0.0025 26.6 3.9 32 81-112 99-137 (241)
77 3liy_A Protease; hydrolase, hy 22.2 44 0.0015 25.0 2.0 28 288-328 10-42 (116)
78 2bju_A Plasmepsin II; aspartic 22.1 60 0.0021 30.5 3.5 40 276-329 129-169 (453)
79 1dpj_A Proteinase A; proteinas 20.1 61 0.0021 28.6 3.0 14 315-328 30-43 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.7e-44 Score=346.11 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=206.8
Q ss_pred ccccccCCCCCCCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCc
Q 019088 66 SIDLELGGNGHPSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSD 145 (346)
Q Consensus 66 ~~~~~~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~ 145 (346)
...+|+.+. ..+++|+++|.||||||+|.|+|||||+++||+|..| .+|+|++.+.|.+
T Consensus 8 ~~~~pv~~d---~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s 66 (413)
T 3vla_A 8 ALVVPVKKD---ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRT 66 (413)
T ss_dssp EEEEEEEEC---TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTS
T ss_pred cEEEEeeec---CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCc
Confidence 445677653 4678999999999999999999999999999999765 3689999999999
Q ss_pred ccccccCCCC--------CCCCCCCccceeEEEe-CCCCeEeEEEEEEEEEEcccCCCccc-cCCCceeeEEeeecccCC
Q 019088 146 NFCRTTYNNR--------YPSCSPGVRCEYVVTY-GDGSSTSGYFVRDIIQLNQASGNLKT-APLNSSVIFGCGNRQSGD 215 (346)
Q Consensus 146 ~~C~~~~~~~--------~~~C~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~~-~~~~~~~~fg~~~~~~~~ 215 (346)
+.|...++.. .+.|. ++.|.|.+.| ++++.+.|++++|+|+|++.++.... ...++++.|||+......
T Consensus 67 ~~C~~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~ 145 (413)
T 3vla_A 67 SQCSLSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQ 145 (413)
T ss_dssp HHHHHTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGT
T ss_pred ccccccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECccccccc
Confidence 9998765422 13454 3569999999 48877899999999999865433110 124568999999986321
Q ss_pred CCCCCCCCcceeeecCCCCCcHHHHHHhcCCCCCcceEeeccC-CCeeEEEeCCCCC---------CC-ceEeeCcCCC-
Q 019088 216 LGSSTDAAVDGILGFGQANSSLLSQLAAAGNVRKEFAHCLDVV-KGGGIFAIGDVVS---------PK-VKTTPMVPNM- 283 (346)
Q Consensus 216 ~~~~~~~~~~GilGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~-~~~G~l~~Gg~d~---------~~-~~~~p~~~~~- 283 (346)
. ....+|||||||++..|++.||.++++++++||+||.+. ..+|.|+||++|. +. +.|+||+.++
T Consensus 146 g---~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~ 222 (413)
T 3vla_A 146 N---LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222 (413)
T ss_dssp T---SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSS
T ss_pred C---cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCc
Confidence 1 124689999999999999999999998899999999974 4679999999874 24 9999998653
Q ss_pred ------------CceeEEEeEEEEcCEEecCCCCCcCCC--CCCcEEEcccccccccCHHHHHHHHHHHHHHHh
Q 019088 284 ------------PHYNVILEEVEVGGNPLDLPTSLLGTG--DERGTIIDSGTTLAYLPPMLYDLVLSQFRFWIA 343 (346)
Q Consensus 284 ------------~~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~~ 343 (346)
.+|.|++++|+||++.+.++...+... +.+++||||||++++||+++|++|.++|.+++.
T Consensus 223 ~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~ 296 (413)
T 3vla_A 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA 296 (413)
T ss_dssp CCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc
Confidence 699999999999999998887666433 357899999999999999999999999998874
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6.5e-45 Score=344.61 Aligned_cols=218 Identities=27% Similarity=0.455 Sum_probs=187.2
Q ss_pred CCCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCC
Q 019088 76 HPSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (346)
Q Consensus 76 ~~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 153 (346)
.++.+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 51 ~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~-------~~y~~~~SsT~~~~~----------- 112 (370)
T 3psg_A 51 ENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH-------NQFNPDDSSTFEATS----------- 112 (370)
T ss_dssp GGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEEEE-----------
T ss_pred eeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC-------CCCCCccCcCcEECC-----------
Confidence 3567899999999999999999999999999999999996 46554 689999999999866
Q ss_pred CCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCC
Q 019088 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQA 233 (346)
Q Consensus 154 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~ 233 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+.+. ....+|||||||++
T Consensus 113 -----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~ 170 (370)
T 3psg_A 113 -----------QELSITYGTGS-MTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFL--YYAPFDGILGLAYP 170 (370)
T ss_dssp -----------EEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCSEEEECSCG
T ss_pred -----------cEEEEEeCCce-EEEEEEEEEEeeCCc--------ccCCeEEEEEEeeccccc--ccCCccceeccCCc
Confidence 79999999999 899999999999986 456899999998765322 24568999999987
Q ss_pred CC------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEec
Q 019088 234 NS------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLD 301 (346)
Q Consensus 234 ~~------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 301 (346)
.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|++ ++.|+|+. .+.+|.|.+++|+|+++.+.
T Consensus 171 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~ 249 (370)
T 3psg_A 171 SISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIA 249 (370)
T ss_dssp GGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEE
T ss_pred cccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEe
Confidence 54 6899999999997 9999999985 45799999999975 59999998 56899999999999998764
Q ss_pred CCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 302 LPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 302 ~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
. ..+..+||||||+++++|.+++++|.+++.+.
T Consensus 250 ~-------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (370)
T 3psg_A 250 C-------SGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS 282 (370)
T ss_dssp C-------TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE
T ss_pred c-------CCCceEEEcCCCCcEECCHHHHHHHHHHhCCc
Confidence 2 23577999999999999999999999988654
No 3
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-44 Score=323.06 Aligned_cols=216 Identities=24% Similarity=0.409 Sum_probs=185.8
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCCcccccccCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 153 (346)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~----------- 70 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH-------SMYESSDSSTYKENG----------- 70 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS-------CCBCGGGCTTCEEEE-----------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC-------CCCCCccCCCeeeCC-----------
Confidence 356789999999999999999999999999999999996 57654 589999999999865
Q ss_pred CCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccC-CCCCCCCCCcceeeecCC
Q 019088 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-DLGSSTDAAVDGILGFGQ 232 (346)
Q Consensus 154 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~ 232 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ .| ....++||||||+
T Consensus 71 -----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f---~~~~~~GilGLg~ 127 (239)
T 1b5f_A 71 -----------TFGAIIYGTGS-ITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVF---LHRLFDGILGLSF 127 (239)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH---TTCSCCEEEECSC
T ss_pred -----------cEEEEEECCCc-EEEEEEEEEEEECCc--------EEccEEEEEEEeccCccc---cccCcceEEecCc
Confidence 78999999998 799999999999875 356899999987643 23 1345799999999
Q ss_pred CCCc--HHHHHHhcCCCC-CcceEeeccC---CCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEEecC
Q 019088 233 ANSS--LLSQLAAAGNVR-KEFAHCLDVV---KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (346)
Q Consensus 233 ~~~s--~~~~l~~~g~i~-~~FS~~l~~~---~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 302 (346)
+..+ ++++|+++++|+ ++||+||.+. ...|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8765 788999999997 9999999874 357999999999864 8999997 567999999999999998754
Q ss_pred CCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 303 ~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
.. ....+||||||+++++|++++++|.++|.+
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 246799999999999999999999998864
No 4
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=343.93 Aligned_cols=215 Identities=22% Similarity=0.404 Sum_probs=186.1
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccccccCCCCCCCcceecCCcccccccC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTY 152 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~ 152 (346)
++.+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+||+...
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~-------~~y~~~~SsT~~~~~---------- 119 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKHNG---------- 119 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS-------CCBCGGGCTTCEEEE----------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC-------CCCCCCCCCcEEECC----------
Confidence 456789999999999999999999999999999999995 57655 589999999999865
Q ss_pred CCCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCC
Q 019088 153 NNRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQ 232 (346)
Q Consensus 153 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~ 232 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||+....+... ....+|||||||+
T Consensus 120 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~ 175 (383)
T 2x0b_A 120 ------------TELTLRYSTGT-VSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPF--MLAEFDGVVGMGF 175 (383)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHH--TTCSSSEEEECSC
T ss_pred ------------cEEEEEcCCcc-EEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCccc--ccCCCceEeccCC
Confidence 89999999998 899999999999975 456 99999998754221 2356899999999
Q ss_pred CCC------cHHHHHHhcCCCC-CcceEeeccC-C----CeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEc
Q 019088 233 ANS------SLLSQLAAAGNVR-KEFAHCLDVV-K----GGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVG 296 (346)
Q Consensus 233 ~~~------s~~~~l~~~g~i~-~~FS~~l~~~-~----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~ 296 (346)
+.. +++++|++||+|+ ++||+||.+. . .+|+|+|||+|++ ++.|+|+. ...+|.|.+++|+|+
T Consensus 176 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 176 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEES
T ss_pred CccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeC
Confidence 765 5899999999997 9999999885 2 3799999999986 48999998 578999999999999
Q ss_pred CEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 297 GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
++.+. +..+..+||||||+++++|.+++++|.+++.+
T Consensus 255 ~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 291 (383)
T 2x0b_A 255 SSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGA 291 (383)
T ss_dssp SCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCC
Confidence 97642 23467899999999999999999999999865
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.5e-43 Score=330.02 Aligned_cols=217 Identities=27% Similarity=0.460 Sum_probs=185.8
Q ss_pred CCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCC
Q 019088 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYP 157 (346)
Q Consensus 78 ~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~ 157 (346)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| .+ .++.|+|++|+|++...
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~-----~~~~y~~~~SsT~~~~~--------------- 70 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS-----GQTKYDPNQSSTYQADG--------------- 70 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT-----TSCCBCGGGCTTCEEEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc-----CCCCCCcccCCCeeeCC---------------
Confidence 4578899999999999999999999999999999999888 22 23699999999999854
Q ss_pred CCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC--
Q 019088 158 SCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS-- 235 (346)
Q Consensus 158 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 235 (346)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.|. ....+||||||++..
T Consensus 71 -------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~---~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 71 -------RTWSISYGDGSSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFA---SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp -------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH---TSSCSEEEECSCGGGCS
T ss_pred -------CEEEEEECCCCCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccc---cCCCceEEEeCCccccc
Confidence 899999999998899999999999975 355899999998765442 234799999998653
Q ss_pred -----cHHHHHHhcCCCC-CcceEeeccC--CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecCC
Q 019088 236 -----SLLSQLAAAGNVR-KEFAHCLDVV--KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (346)
Q Consensus 236 -----s~~~~l~~~g~i~-~~FS~~l~~~--~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 303 (346)
+++++|+++|+|. ++||+||.+. ...|.|+||++|++ ++.|+|+.....+|.|.+++|+|++. +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 5899999999997 9999999653 56799999999975 58999998667899999999999993 31
Q ss_pred CCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 304 ~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
.....+||||||+++++|+++|+++.+++.+++
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~ 242 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASD 242 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhccc
Confidence 124579999999999999999999999987654
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=326.17 Aligned_cols=217 Identities=25% Similarity=0.420 Sum_probs=186.3
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 79 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH-------SRFQPSQSSTYSQPG------------ 79 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS-------CCBCGGGCTTCBCCS------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC-------CcCCcccCcceEECC------------
Confidence 456789999999999999999999999999999999996 67654 589999999999755
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .+.++.|||+....+... .....+||||||++.
T Consensus 80 ----------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 138 (351)
T 1tzs_A 80 ----------QSFSIQYGTGS-LSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTF--VDAEFDGILGLGYPS 138 (351)
T ss_dssp ----------CEEEEESSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGG--GGCSCSEEEECSCGG
T ss_pred ----------CEEEEEeCCCC-eEEEEEEeEEEECCe--------EECCeEEEEEEecccccc--ccCCCceEEecCCcc
Confidence 79999999998 799999999999975 356899999988755321 234679999999975
Q ss_pred C------cHHHHHHhcCCCC-CcceEeeccCC---CeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEe
Q 019088 235 S------SLLSQLAAAGNVR-KEFAHCLDVVK---GGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPL 300 (346)
Q Consensus 235 ~------s~~~~l~~~g~i~-~~FS~~l~~~~---~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 300 (346)
. +++++|+++|+|. ++||+||.+.. .+|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++.+
T Consensus 139 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~ 217 (351)
T 1tzs_A 139 LAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVM 217 (351)
T ss_dssp GSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEE
T ss_pred ccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceE
Confidence 4 5899999999997 99999998852 2799999999975 58999998 5689999999999999875
Q ss_pred cCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
. ......+||||||+++++|.+++++|.+++.+.
T Consensus 218 ~-------~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~ 251 (351)
T 1tzs_A 218 F-------CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAA 251 (351)
T ss_dssp E-------CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred E-------cCCCceEEeccCCcceeCCHHHHHHHHHHhCCc
Confidence 3 123567999999999999999999999998653
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=9.5e-43 Score=324.30 Aligned_cols=215 Identities=24% Similarity=0.378 Sum_probs=185.7
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCC--CCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGC--SRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C--~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|+|||||+++||+|..| ..|..+ +.|||++|+|++...
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 70 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH-------QRFDPRKSSTFQNLG------------ 70 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC-------CCCCCccCCCeEECC------------
Confidence 35678999999999999999999999999999999999 467654 589999999999866
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccC-CCCCCCCCCcceeeecCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-DLGSSTDAAVDGILGFGQA 233 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~~ 233 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ .| .....+||||||++
T Consensus 71 ----------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~---~~~~~~GilGLg~~ 128 (323)
T 3cms_A 71 ----------KPLSIHYGTGS-MQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFF---TYAEFDGILGMAYP 128 (323)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHH---HHSSCSEEEECSCG
T ss_pred ----------cEEEEEeCCCC-eEEEEEEEEEEECCe--------EEeccEEEEEEecccccc---cccCCceEEecCcc
Confidence 79999999998 799999999999875 356899999998754 22 12357999999986
Q ss_pred CC------cHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEEecC
Q 019088 234 NS------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (346)
Q Consensus 234 ~~------s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 302 (346)
.. +++++|+++|+|. ++||+||.+....|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVAC 207 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEES
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeec
Confidence 53 6899999999997 9999999986445999999999864 8999998 568999999999999988753
Q ss_pred CCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 303 ~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
+ ....+||||||+++++|++++++|.+++.+
T Consensus 208 ~-------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 238 (323)
T 3cms_A 208 E-------GGCQAILDTGTSKLVGPSSDILNIQQAIGA 238 (323)
T ss_dssp T-------TCEEEEECTTCCSEEECHHHHHHHHHHHTC
T ss_pred C-------CCcEEEEecCCccEeCCHHHHHHHHHHhCC
Confidence 2 246799999999999999999999999864
No 8
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.6e-42 Score=326.17 Aligned_cols=218 Identities=26% Similarity=0.426 Sum_probs=187.7
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCCcccccccCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 153 (346)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|+|++|+|++...
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~----------- 75 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKETD----------- 75 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEEE-----------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEecC-----------
Confidence 356789999999999999999999999999999999998 78765 589999999999865
Q ss_pred CCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccC-----CCCCCCCCCcceee
Q 019088 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-----DLGSSTDAAVDGIL 228 (346)
Q Consensus 154 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~Gil 228 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ .+. .....+|||
T Consensus 76 -----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~--~~~~~~Gil 133 (361)
T 1mpp_A 76 -----------YNLNITYGTGG-ANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPD--SELFLDGIF 133 (361)
T ss_dssp -----------EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTT--CSSCCCEEE
T ss_pred -----------CeEEEEECCce-EEEEEEEEEEEECCE--------EEeceEEEEEEeccCcccccccc--ccCCCCCEE
Confidence 79999999999 899999999999975 456899999998765 222 235689999
Q ss_pred ecCCCC------------CcHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCC----CceEeeCcCCCC---ceeE
Q 019088 229 GFGQAN------------SSLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMP---HYNV 288 (346)
Q Consensus 229 GLg~~~------------~s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~---~w~v 288 (346)
|||++. .+++++|+++|+|. ++||+||.+....|.|+||++|++ ++.|+|+....+ +|.|
T Consensus 134 GLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 134 GAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp ECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred EeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 999863 46888999999997 999999998545899999999975 589999985544 8999
Q ss_pred EEeEEEEcCEEecCCCCCcCCCCCCcEE-EcccccccccCHHHHHHHHHHHHHH
Q 019088 289 ILEEVEVGGNPLDLPTSLLGTGDERGTI-IDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 289 ~l~~i~v~~~~~~~~~~~~~~~~~~~~i-iDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
.+++|+|+++.+..+ ....+| |||||++++||++++++|++++.+.
T Consensus 214 ~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~ 260 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPD 260 (361)
T ss_dssp EEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTT
T ss_pred EEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCc
Confidence 999999999876421 245699 9999999999999999999998763
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-42 Score=323.12 Aligned_cols=216 Identities=24% Similarity=0.417 Sum_probs=186.1
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 68 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH-------NKFKPRQSSTYVETG------------ 68 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS-------CCBCGGGCTTCEEEE------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC-------CcCCCccCCCeEeCC------------
Confidence 346789999999999999999999999999999999996 47654 589999999999865
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+.+. .....+||||||++.
T Consensus 69 ----------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 69 ----------KTVDLTYGTGG-MRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQ--AAAPFDGILGLAYPS 127 (324)
T ss_dssp ----------EEEEEECSSCE-EEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTT--TTCSSSEEEECSCGG
T ss_pred ----------cEEEEEECCCC-eEEEEEECceeECCc--------EEcccEEEEEEecccccc--cCCCCceEEecCCcc
Confidence 79999999998 599999999999875 456899999998765332 235689999999975
Q ss_pred C------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecC
Q 019088 235 S------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (346)
Q Consensus 235 ~------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 302 (346)
. +++++|+++|+|. ++||+||.+. ..+|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec
Confidence 4 5899999999997 9999999885 34899999999975 58999998 568999999999999987521
Q ss_pred CCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 303 ~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
.+ ..+||||||+++++|++++++|.+++.+.
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 12 67999999999999999999999988653
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.3e-42 Score=323.10 Aligned_cols=217 Identities=24% Similarity=0.410 Sum_probs=187.3
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 67 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH-------HRFDPRKSSTFRNLG------------ 67 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC-------CCCCCCCCcCeEcCC------------
Confidence 567889999999999999999999999999999999997 46554 689999999999876
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+... .....+||||||++.
T Consensus 68 ----------~~~~i~Yg~gs-~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 126 (320)
T 4aa9_A 68 ----------KPLSIHYGTGS-MEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVF--TYSEFDGILGLAYPS 126 (320)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHH--HSCCCSEEEECSCGG
T ss_pred ----------cEEEEEECCcE-EEEEEEEEEEEECCE--------eecCeEEEEEEEcccccc--cccCcccEEecCccc
Confidence 79999999999 799999999999985 456899999998765211 124579999999864
Q ss_pred ------CcHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEEecCC
Q 019088 235 ------SSLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (346)
Q Consensus 235 ------~s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 303 (346)
.+++++|+++|+|+ ++||+||.+...+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+..+
T Consensus 127 ~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~ 205 (320)
T 4aa9_A 127 LASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV 205 (320)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST
T ss_pred ccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC
Confidence 36999999999997 9999999985468999999999864 8999997 6789999999999999887532
Q ss_pred CCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 304 ~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
....++|||||+++++|++++++|++++.+.
T Consensus 206 -------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 206 -------GGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp -------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred -------CCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2467999999999999999999999988653
No 11
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.2e-42 Score=321.41 Aligned_cols=215 Identities=22% Similarity=0.358 Sum_probs=183.5
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCC--CCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA--GCSRCPT--KSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~--~C~~C~~--~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------------
Confidence 3678999999999999999999999999999976 6764421 11223445799999999999866
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+.... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 78 ----------QDFSIEYGDLTSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ----------EEEEEEBTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CceEEEECCCCEEEEEEEEEEEEECCE--------EEccEEEEEEEecC---------CCccEEEEcCCc
Confidence 899999999998899999999999975 35689999999762 368999999975
Q ss_pred C--------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEEe
Q 019088 235 S--------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPL 300 (346)
Q Consensus 235 ~--------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~ 300 (346)
. +++++|+++|+|+ ++||+||.+. ...|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 4 7999999999997 9999999874 568999999999875 8899998 5569999999999999887
Q ss_pred cCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
.. ...+||||||+++++|++++++|++++.+..
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATW 242 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcc
Confidence 43 2459999999999999999999999987643
No 12
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=9.9e-43 Score=324.95 Aligned_cols=215 Identities=27% Similarity=0.415 Sum_probs=181.6
Q ss_pred CCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCC
Q 019088 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYP 157 (346)
Q Consensus 78 ~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~ 157 (346)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|..+. ++.|||++|+|++.+.
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~-----~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATG-----HAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTT-----SCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCC-----CCcCCcccCcCceEcC---------------
Confidence 35788999999999999999999999999999999998764322 2689999999999864
Q ss_pred CCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC--
Q 019088 158 SCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS-- 235 (346)
Q Consensus 158 ~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 235 (346)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.+. .....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 2799999999998899999999999975 356899999998654332 1235799999998643
Q ss_pred -------cHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecCC
Q 019088 236 -------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLP 303 (346)
Q Consensus 236 -------s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 303 (346)
+++++|+++ |. ++||+||.+ ..+|.|+||++|++ ++.|+|+.....+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 589999986 65 999999987 46899999999965 58999998667899999999999998652
Q ss_pred CCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHH
Q 019088 304 TSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFR 339 (346)
Q Consensus 304 ~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~ 339 (346)
.....+||||||+++++|++++++|+++|.
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~ 240 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQ 240 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCT
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCC
Confidence 224679999999999999999999998873
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4.6e-42 Score=320.47 Aligned_cols=214 Identities=27% Similarity=0.472 Sum_probs=184.4
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSR--CPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~--C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+|++...
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 69 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKANG------------ 69 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEECC------------
Confidence 3457899999999999999999999999999999999975 7654 589999999999855
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccC-CCCCCCCCCcceeeecCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSG-DLGSSTDAAVDGILGFGQA 233 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~~ 233 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .| .....+||||||++
T Consensus 70 ----------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 127 (329)
T 1dpj_A 70 ----------TEFAIQYGTGS-LEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTF---AFGKFDGILGLGYD 127 (329)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHH---TTCSCSEEEECSCG
T ss_pred ----------cEEEEEECCce-EEEEEEEEEEEECCe--------EECCeEEEEEEecCcccc---ccCCcceEEEeCCc
Confidence 89999999995 899999999999975 356899999998654 23 13457999999997
Q ss_pred CC------cHHHHHHhcCCCC-CcceEeeccCC----CeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCE
Q 019088 234 NS------SLLSQLAAAGNVR-KEFAHCLDVVK----GGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGN 298 (346)
Q Consensus 234 ~~------s~~~~l~~~g~i~-~~FS~~l~~~~----~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~ 298 (346)
.. +++++|+++|+|+ ++||+||.+.. .+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 4789999999997 99999997642 37999999999764 8999998 56899999999999998
Q ss_pred EecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
.+.. ....+||||||+++++|++++++|++++.+
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 240 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGA 240 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTC
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCC
Confidence 8742 246799999999999999999999999864
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=7.6e-42 Score=319.01 Aligned_cols=217 Identities=26% Similarity=0.463 Sum_probs=186.1
Q ss_pred CCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCC
Q 019088 78 SATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNR 155 (346)
Q Consensus 78 ~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 155 (346)
+.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------- 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH-------SRFNPSESSTYSTNG------------- 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE-------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC-------CcCCCccCCCeEECC-------------
Confidence 45789999999999999999999999999999999996 47654 589999999999865
Q ss_pred CCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC
Q 019088 156 YPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS 235 (346)
Q Consensus 156 ~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~ 235 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+.+. .....+||||||++..
T Consensus 69 ---------~~~~i~Yg~gs-~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 69 ---------QTFSLQYGSGS-LTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp ---------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred ---------cEEEEEeCCCC-eEEEEEeeeEEEcce--------EECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 79999999998 599999999999875 356899999998755321 2346799999999764
Q ss_pred ------cHHHHHHhcCCCC-CcceEeeccCC-C-eeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecC
Q 019088 236 ------SLLSQLAAAGNVR-KEFAHCLDVVK-G-GGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDL 302 (346)
Q Consensus 236 ------s~~~~l~~~g~i~-~~FS~~l~~~~-~-~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 302 (346)
+++++|+++|+|. ++||+||.+.. . +|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 5899999999997 99999998852 2 799999999976 48999998 568999999999999987531
Q ss_pred CCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 303 PTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 303 ~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
......+||||||+++++|++++++|++++.+.
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 123567999999999999999999999998653
No 15
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.8e-42 Score=323.24 Aligned_cols=212 Identities=25% Similarity=0.418 Sum_probs=180.5
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|.. .++.|||++|+|++.+.
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57889999999999999999999999999999999987643 13689999999999864
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 235 (346)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.+. .....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 2799999999998899999999999975 356899999998754332 1135799999998643
Q ss_pred ------cHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecCCC
Q 019088 236 ------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (346)
Q Consensus 236 ------s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (346)
+++++|+++ |. ++||+||.+ ..+|.|+||++|++ ++.|+|+..+..+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 589999886 65 999999987 46899999999976 48999998667899999999999997652
Q ss_pred CCcCCCCCCcEEEcccccccccCHHHHHHHHHHH
Q 019088 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQF 338 (346)
Q Consensus 305 ~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l 338 (346)
.....+||||||+++++|++++++|+++|
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i 238 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQV 238 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTS
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhC
Confidence 12457999999999999999999999887
No 16
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.5e-42 Score=337.90 Aligned_cols=217 Identities=26% Similarity=0.399 Sum_probs=184.7
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCccccccCCCCCCCcceecCCcccccccCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS---RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 153 (346)
++.+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+||+...
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~----------- 109 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH-------SRYKAGASSTYKKNG----------- 109 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS-------CCBCGGGCTTCBCCC-----------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC-------CCCCcccCCCeeeCC-----------
Confidence 346789999999999999999999999999999999985 57654 589999999998754
Q ss_pred CCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCC
Q 019088 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQA 233 (346)
Q Consensus 154 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~ 233 (346)
+.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+... ....++||||||++
T Consensus 110 -----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~ 167 (478)
T 1qdm_A 110 -----------KPAAIQYGTGS-IAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITF--LVAKFDGILGLGFK 167 (478)
T ss_dssp -----------CEEEEEETTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHH--HHCSSSEEEECSCG
T ss_pred -----------cEEEEEcCCCC-eEEEEEEEEEEECCe--------EECCEEEEEEEecCCccc--ccccccceeccccc
Confidence 79999999998 899999999999975 356899999987654211 12457999999997
Q ss_pred CC------cHHHHHHhcCCCC-CcceEeeccC---CCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEE
Q 019088 234 NS------SLLSQLAAAGNVR-KEFAHCLDVV---KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNP 299 (346)
Q Consensus 234 ~~------s~~~~l~~~g~i~-~~FS~~l~~~---~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~ 299 (346)
.. +++++|++||+|+ ++||+||.+. ..+|.|+||++|+++ +.|+|+. ..++|.|.+++|.|+++.
T Consensus 168 ~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 168 EISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKS 246 (478)
T ss_dssp GGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEE
T ss_pred ccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEE
Confidence 65 4789999999997 9999999874 347999999999875 8999997 568999999999999988
Q ss_pred ecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 300 LDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 300 ~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
+.+.. ....+||||||+++++|++++++|.++|.+
T Consensus 247 ~~~~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 247 TGFCA------GGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp CSTTT------TCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred EeecC------CCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 75432 356799999999999999999999998864
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.1e-41 Score=319.65 Aligned_cols=215 Identities=24% Similarity=0.373 Sum_probs=183.9
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCCC--CCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA--GCSRCPTK--SDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~--~C~~C~~~--~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|... ...|..++.|||++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC------------
Confidence 4678999999999999999999999999999976 67654221 2234445799999999999876
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+.... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 78 ----------TRFDIKYGDGSYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ----------CcEEEEeCCCCeEEEEEEEEEEEECCE--------EecceEEEEEEecC---------CCcCEEEEcccc
Confidence 899999999998899999999999975 35689999999763 358999999975
Q ss_pred C--------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEe
Q 019088 235 S--------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPL 300 (346)
Q Consensus 235 ~--------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 300 (346)
. +++++|+++|+|+ ++||+||.+. ...|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEec
Confidence 3 8999999999997 9999999874 56899999999976 48999998 4569999999999999887
Q ss_pred cCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
.. ...+||||||+++++|++++++|++++.+.+
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQM 242 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCee
Confidence 43 2459999999999999999999999997643
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.1e-42 Score=321.19 Aligned_cols=215 Identities=22% Similarity=0.410 Sum_probs=185.9
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccccccCCCCCCCcceecCCcccccccC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTY 152 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~ 152 (346)
++.+..|+++|.||||||++.|+|||||+++||+|..|. .|..+ +.|+|++|+|++...
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~-------~~y~~~~SsT~~~~~---------- 76 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH-------KLFDASDSSSYKHNG---------- 76 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS-------CCBCGGGCTTCEEEE----------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC-------CCCCCCcCcCeeECC----------
Confidence 456789999999999999999999999999999999997 46543 689999999999865
Q ss_pred CCCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCC-CCCCCCCCcceeeecC
Q 019088 153 NNRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGD-LGSSTDAAVDGILGFG 231 (346)
Q Consensus 153 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg 231 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .+ ++.|||+....+. + .....+||||||
T Consensus 77 ------------~~~~i~Yg~gs-~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~---~~~~~~GilGLg 131 (341)
T 3k1w_A 77 ------------TELTLRYSTGT-VSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPF---MLAEFDGVVGMG 131 (341)
T ss_dssp ------------EEEEEEETTEE-EEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHH---TTCSSSEEEECS
T ss_pred ------------CEEEEEECCcE-EEEEEEEEEEEECCc--------ee-eEEEEEEEEcccccc---ccCCcceEEECC
Confidence 89999999998 899999999999975 34 7999999987653 3 234579999999
Q ss_pred CCCC------cHHHHHHhcCCCC-CcceEeeccCC-----CeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEE
Q 019088 232 QANS------SLLSQLAAAGNVR-KEFAHCLDVVK-----GGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEV 295 (346)
Q Consensus 232 ~~~~------s~~~~l~~~g~i~-~~FS~~l~~~~-----~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v 295 (346)
++.. +++++|++||+|+ ++||+||.+.. .+|.|+||++|+++ +.|+|+. ...+|.|.+++|+|
T Consensus 132 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 210 (341)
T 3k1w_A 132 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSV 210 (341)
T ss_dssp CGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEE
T ss_pred chhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEE
Confidence 9765 4899999999997 99999998852 27999999999874 8999998 67899999999999
Q ss_pred cCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 296 GGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
+++.+.. .....++|||||+++++|++++++|++++.+.
T Consensus 211 ~~~~~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 249 (341)
T 3k1w_A 211 GSSTLLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAK 249 (341)
T ss_dssp TTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred CCEEeec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCe
Confidence 9987532 23467999999999999999999999998653
No 19
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.2e-41 Score=323.12 Aligned_cols=249 Identities=22% Similarity=0.357 Sum_probs=193.8
Q ss_pred ccccCCCCCCCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCccc
Q 019088 68 DLELGGNGHPSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNF 147 (346)
Q Consensus 68 ~~~~~~~~~~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~ 147 (346)
..|+.+ ++.++.|+++|.||||||+|.|+|||||+++||+|..| .+|+|++.+.|.+..
T Consensus 11 ~~pl~~---~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~ 69 (403)
T 3aup_A 11 VLPVQN---DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQ 69 (403)
T ss_dssp EEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHH
T ss_pred EEeeec---CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCcc
Confidence 456653 34678999999999999999999999999999998753 368999999999999
Q ss_pred ccccCCC--------CCCCCCCCccceeEEEeC-CCCeEeEEEEEEEEEEcccCCCcc---ccCCCceeeEEeeecccCC
Q 019088 148 CRTTYNN--------RYPSCSPGVRCEYVVTYG-DGSSTSGYFVRDIIQLNQASGNLK---TAPLNSSVIFGCGNRQSGD 215 (346)
Q Consensus 148 C~~~~~~--------~~~~C~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~~---~~~~~~~~~fg~~~~~~~~ 215 (346)
|...+.. ....|. ++.|.|.+.|+ +++.+.|.+++|+|+|++.++..+ ....++++.|||+......
T Consensus 70 C~~~~~~~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~ 148 (403)
T 3aup_A 70 CSRANTHQCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQ 148 (403)
T ss_dssp HHHTTCCCEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGS
T ss_pred ccCccccCccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccc
Confidence 9876543 123464 35799999998 788899999999999998543210 0014568999999987533
Q ss_pred -CCCCCCCCcceeeecCCCCCcHHHHHHhcCCCCCcceEeeccC-CCeeEEEeCCCCC-------C-----CceEeeCcC
Q 019088 216 -LGSSTDAAVDGILGFGQANSSLLSQLAAAGNVRKEFAHCLDVV-KGGGIFAIGDVVS-------P-----KVKTTPMVP 281 (346)
Q Consensus 216 -~~~~~~~~~~GilGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~-~~~G~l~~Gg~d~-------~-----~~~~~p~~~ 281 (346)
+ ....++||||||++..+++.||.+..+.+++||+||.+. ..+|.|+||+ |+ + ++.|+|++.
T Consensus 149 ~~---~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~ 224 (403)
T 3aup_A 149 KG---LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTI 224 (403)
T ss_dssp SS---SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEE
T ss_pred cC---CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeeccccc
Confidence 2 235689999999999999999976544459999999874 5689999999 63 2 789999985
Q ss_pred C-CCceeEEEeEEEEcCEEe-cCCCCCcC--CCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 282 N-MPHYNVILEEVEVGGNPL-DLPTSLLG--TGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 282 ~-~~~w~v~l~~i~v~~~~~-~~~~~~~~--~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
+ ..+|.|.+++|+|+++.+ .++...+. ..+...+||||||++++||+++|++|+++|.+++
T Consensus 225 ~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~ 289 (403)
T 3aup_A 225 TLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL 289 (403)
T ss_dssp CTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS
T ss_pred CCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh
Confidence 5 379999999999999988 66655442 1234579999999999999999999999997654
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.8e-41 Score=316.81 Aligned_cols=216 Identities=25% Similarity=0.421 Sum_probs=185.0
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCC--CCCCCCC--CCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAG--CSRCPTK--SDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~--C~~C~~~--~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
.+..|+++|.||||||++.|++||||+++||++.. |..|... ...|..++.|+|++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 46789999999999999999999999999999765 7555321 1234445799999999999876
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN 234 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 234 (346)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+.... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCE--------EecceEEEEEEccC---------CCccEEEecCcc
Confidence 899999999998999999999999985 45689999998763 358999999976
Q ss_pred -------CcHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEec
Q 019088 235 -------SSLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLD 301 (346)
Q Consensus 235 -------~s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 301 (346)
.+++++|+++|+|+ ++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|.|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 47999999999997 9999999875 45799999999976 48999998 55699999999999999875
Q ss_pred CCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 302 LPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 302 ~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
.+ ...++|||||++++||++++++|++++.+..
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 32 3569999999999999999999999987543
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=5.2e-41 Score=314.63 Aligned_cols=208 Identities=25% Similarity=0.454 Sum_probs=181.6
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEe-----CCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVN-----CAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYN 153 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~-----~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~ 153 (346)
.+..|+++|.||||||++.|+|||||+++||+ |..|..|..+ +.|+|++|+|++...
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~----------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSS-------GTFTPSSSSSYKNLG----------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTT-------CCBCGGGCTTCEEEE-----------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCC-------CcCCCccCcceeeCC-----------
Confidence 35789999999999999999999999999998 5555567654 689999999999876
Q ss_pred CCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCC
Q 019088 154 NRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQA 233 (346)
Q Consensus 154 ~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~ 233 (346)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+ .+||||||++
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGV--------SITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCE--------EECceEEEEEEecCC---------CceeEEecCc
Confidence 899999999988999999999999986 456899999998642 4899999986
Q ss_pred CC----------------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEe
Q 019088 234 NS----------------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILE 291 (346)
Q Consensus 234 ~~----------------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~ 291 (346)
.. +|+++|+++|+|+ ++||+||.+. ...|.|+|||+|++ ++.|+|+. ...+|.|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEE
Confidence 53 3999999999998 9999999875 45899999999976 48999998 5569999999
Q ss_pred EEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 292 EVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 292 ~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
+|.|+++.+.. ...++|||||++++||++++++|++++.+..
T Consensus 203 ~i~v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 244 (339)
T 3fv3_A 203 SVNLKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARL 244 (339)
T ss_dssp EEEESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEE
T ss_pred EEEECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEE
Confidence 99999988743 2569999999999999999999999997654
No 22
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4e-41 Score=319.18 Aligned_cols=209 Identities=23% Similarity=0.439 Sum_probs=182.2
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~------------ 118 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK-------NLYDSSKSKSYEKDG------------ 118 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS-------CCBCGGGCTTCEEEE------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC-------CcCCCccCCceEECC------------
Confidence 456789999999999999999999999999999999995 57654 689999999999865
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeec----ccCCCCCCCCCCcceeeec
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNR----QSGDLGSSTDAAVDGILGF 230 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 230 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .+.+ .|||+.. .. .| .....+|||||
T Consensus 119 ----------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGL 174 (375)
T 1miq_A 119 ----------TKVDITYGSGT-VKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY---SSVEFDGILGL 174 (375)
T ss_dssp ----------EEEEEEETTEE-EEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH---HHSCCCEEEEC
T ss_pred ----------cEEEEEeCCCe-EEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc---ccCCCceEEeC
Confidence 79999999999 799999999999975 3457 9999998 43 33 12457999999
Q ss_pred CCCCC------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCE
Q 019088 231 GQANS------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGN 298 (346)
Q Consensus 231 g~~~~------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 298 (346)
|++.. +++++|++||+|. ++||+||.+. ..+|.|+|||+|++ ++.|+|+. ...+|.|.++ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99754 5899999999997 9999999985 35899999999976 48999997 5789999999 999998
Q ss_pred EecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
.+ ....+||||||+++++|.+++++|++++.+
T Consensus 253 ~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 284 (375)
T 1miq_A 253 TM----------EKANVIVDSGTTTITAPSEFLNKFFANLNV 284 (375)
T ss_dssp EE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTC
T ss_pred Ec----------ccceEEecCCCccEEcCHHHHHHHHHHhCC
Confidence 76 145699999999999999999999999876
No 23
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.6e-40 Score=322.99 Aligned_cols=220 Identities=22% Similarity=0.295 Sum_probs=184.6
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.||||+|+|.|+|||||+++||+|..| |..+ +.|+|++|+||+...
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~~-------~~y~~~~SsT~~~~~---------------- 126 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRDLR---------------- 126 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cccC-------CcccCCCCCCcccCC----------------
Confidence 456899999999999999999999999999999988 5433 589999999999876
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC----
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN---- 234 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~---- 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++... ....+.|+++....+.|. ....++||||||++.
T Consensus 127 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~------~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~ 191 (455)
T 3lpj_A 127 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIARP 191 (455)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------ccEEEEeCCeE-EEEEEEEEEEEECCCcc------eeeEEEEEEEEccCcccc--cCCCcceEEEeCccccccc
Confidence 89999999999 59999999999985211 112367888887765552 235679999999853
Q ss_pred ----CcHHHHHHhcCCCCCcceEeeccC-----------CCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEE
Q 019088 235 ----SSLLSQLAAAGNVRKEFAHCLDVV-----------KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEV 295 (346)
Q Consensus 235 ----~s~~~~l~~~g~i~~~FS~~l~~~-----------~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v 295 (346)
.+++++|++|++|+++||+||.+. ..+|.|+||++|+++ +.|+|+. ...+|.|.+++|.|
T Consensus 192 ~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 270 (455)
T 3lpj_A 192 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 270 (455)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEE
T ss_pred cCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEEE
Confidence 369999999999989999999741 457999999999864 8999998 56899999999999
Q ss_pred cCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 296 GGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
+++.+.++...+ ....+||||||+++++|.+++++|+++|.+..
T Consensus 271 ~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 314 (455)
T 3lpj_A 271 NGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 314 (455)
T ss_dssp TTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHT
T ss_pred CCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhc
Confidence 999987654433 24679999999999999999999999999874
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=4.8e-41 Score=324.62 Aligned_cols=210 Identities=21% Similarity=0.356 Sum_probs=182.7
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCC--CCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGC--SRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C--~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|++||||+++||+|..| ..|..+ +.|||++|+|++...
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~-------~~ydps~SsT~~~~~------------ 193 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK-------NHYDSSKSKTYEKDD------------ 193 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS-------CCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC-------CCCCCCCCcccccCC------------
Confidence 45688999999999999999999999999999999999 468665 589999999999865
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeec----ccCCCCCCCCCCcceeeec
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNR----QSGDLGSSTDAAVDGILGF 230 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 230 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||+.. .++ + .....+|||||
T Consensus 194 ----------~~f~i~YgdGs-~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 194 ----------TPVKLTSKAGT-ISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp ----------EEEEEECSSEE-EEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred ----------CEEEEEECCCE-EEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 79999999999 899999999999985 456 99999988 544 3 13457999999
Q ss_pred CCCC------CcHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCE
Q 019088 231 GQAN------SSLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGN 298 (346)
Q Consensus 231 g~~~------~s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~ 298 (346)
|++. .+++++|+++|+|+ ++||+||.+. ..+|.|+|||+|+++ +.|+|+. .+.+|.|.++ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 9865 36999999999997 9999999986 358999999999864 8999998 6789999999 999997
Q ss_pred EecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
. .....++|||||+++++|++++++|++++.+.
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~ 360 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVF 360 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCE
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCe
Confidence 1 12456999999999999999999999988653
No 25
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4.7e-40 Score=314.30 Aligned_cols=219 Identities=22% Similarity=0.293 Sum_probs=182.8
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|+ +.|||++|+|++...
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~~---------------- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDLR---------------- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeCC----------------
Confidence 3568999999999999999999999999999999886553 489999999999876
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcc-cCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC---
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQ-ASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN--- 234 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~--- 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++ .+.. ..+.|++.....+.|. .....+||||||++.
T Consensus 74 ------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 74 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ceEEEEECCcE-EEEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 79999999998 59999999999983 3211 1366787776555442 134679999999864
Q ss_pred -----CcHHHHHHhcCCCCCcceEeeccC-----------CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEE
Q 019088 235 -----SSLLSQLAAAGNVRKEFAHCLDVV-----------KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVE 294 (346)
Q Consensus 235 -----~s~~~~l~~~g~i~~~FS~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 294 (346)
.+++++|++|++|+++||+||.+. ..+|.|+||++|+. ++.|+|+. +..+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 368999999999989999999752 35799999999976 48999998 5689999999999
Q ss_pred EcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 295 VGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 295 v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
|+++.+.++...+. ...+||||||+++++|++++++|+++|.+..
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 261 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 261 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhc
Confidence 99998876554332 3579999999999999999999999998764
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=315.20 Aligned_cols=220 Identities=25% Similarity=0.344 Sum_probs=182.1
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|+ +.|||++|+|++...
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~~---------------- 65 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSKG---------------- 65 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEEE----------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeCC----------------
Confidence 4567999999999999999999999999999999887663 489999999999876
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 235 (346)
|.|.+.|++|+ +.|.+++|+|+|++.... ...+.|++..+..+.|. .....+||||||++..
T Consensus 66 ------~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~~ 130 (383)
T 2ewy_A 66 ------FDVTVKYTQGS-WTGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAKP 130 (383)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------ceEEEEECCcE-EEEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhcccc
Confidence 79999999998 699999999999863110 11366888776555442 1245799999998643
Q ss_pred -----cHHHHHHhcCCCCCcceEeecc--------CCCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCE
Q 019088 236 -----SLLSQLAAAGNVRKEFAHCLDV--------VKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGN 298 (346)
Q Consensus 236 -----s~~~~l~~~g~i~~~FS~~l~~--------~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 298 (346)
+++++|++|+.++++||+||.+ ...+|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++
T Consensus 131 ~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 131 SSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQ 209 (383)
T ss_dssp CTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTE
T ss_pred cccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCE
Confidence 5899999999888899999963 145799999999965 58999998 56899999999999999
Q ss_pred EecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
.+.++...+. ...+||||||+++++|++++++|+++|.+..
T Consensus 210 ~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~ 250 (383)
T 2ewy_A 210 SLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARAS 250 (383)
T ss_dssp ECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTT
T ss_pred EccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhc
Confidence 9876554332 4679999999999999999999999998764
No 27
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.1e-40 Score=311.08 Aligned_cols=212 Identities=16% Similarity=0.198 Sum_probs=182.2
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CC--CCCCCCCccccccCCCCCCCcceecCCcccccccC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RC--PTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTY 152 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C--~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~ 152 (346)
++.+..|+++|.|| +|++.|+|||||+++||+|..|. .| ..+ +.|||++| |++...
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~-------~~y~~~~S-T~~~~~---------- 72 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNL-------QKYEKLKP-KYISDG---------- 72 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTC-------CCCCCSSC-EEEEEE----------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccccc-------CccCCCCC-ceEECC----------
Confidence 45678899999999 89999999999999999999996 68 444 58999999 998755
Q ss_pred CCCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCC
Q 019088 153 NNRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQ 232 (346)
Q Consensus 153 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~ 232 (346)
+.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+......|. ...++||||||+
T Consensus 73 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f~---~~~~~GilGLg~ 128 (330)
T 1yg9_A 73 ------------NVQVKFFDTGS-AVGRGIEDSLTISQL--------TTSQQDIVLADELSQEVC---ILSADVVVGIAA 128 (330)
T ss_dssp ------------EEEEEETTTEE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEECTHHH---HTTCSEEEECSC
T ss_pred ------------CEEEEEECCce-EEEEEEEEEEEECCE--------EEcCeEEEEEEEcccccc---cccCceEEEcCc
Confidence 79999999998 599999999999975 356899999998733331 245799999999
Q ss_pred CCCc-------HHHHHHhcCCCCCcceEeeccC-CC--eeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCE
Q 019088 233 ANSS-------LLSQLAAAGNVRKEFAHCLDVV-KG--GGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGN 298 (346)
Q Consensus 233 ~~~s-------~~~~l~~~g~i~~~FS~~l~~~-~~--~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 298 (346)
+..+ ++++|+++|+|+++||+||.+. .. +|.|+||++|++ ++.|+|+. ...+|.|.+++|+|+++
T Consensus 129 ~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~ 207 (330)
T 1yg9_A 129 PGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDT 207 (330)
T ss_dssp TTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTE
T ss_pred chhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCE
Confidence 7665 9999999998899999999885 22 899999999986 48999998 67899999999999998
Q ss_pred EecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 299 PLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 299 ~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
.+. .....+||||||+++++|++++++|++++.+.
T Consensus 208 ~~~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~ 242 (330)
T 1yg9_A 208 TVA--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCV 242 (330)
T ss_dssp EEE--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCE
T ss_pred EEc--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCc
Confidence 763 12467999999999999999999999998653
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.3e-39 Score=311.98 Aligned_cols=220 Identities=22% Similarity=0.292 Sum_probs=181.3
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.||||||+|.|+|||||+++||+|..| |..+ +.|+|++|+|++...
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~~-------~~y~~~~SsT~~~~~---------------- 80 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFLH-------RYYQRQLSSTYRDLR---------------- 80 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTCS-------CCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cccc-------CCcCcccCcccccCC----------------
Confidence 346899999999999999999999999999999988 4333 589999999999876
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC----
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN---- 234 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~---- 234 (346)
|.|.+.|++|+ +.|.+++|+|+|++... ....+.|++.....+.+. ....++||||||++.
T Consensus 81 ------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~------~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~ 145 (402)
T 3vf3_A 81 ------KGVYVPYTQGK-WEGELGTDLVSIPHGPN------VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIARP 145 (402)
T ss_dssp ------EEEEEECSSCE-EEEEEEEEEEECTTSCS------CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred ------CEEEEEECcEE-EEEEEEEEEEEECCccc------cceeeeEEEEEccccccc--cCCCccceEEcCchhhccc
Confidence 89999999999 69999999999985211 111345788777665542 234679999999853
Q ss_pred ----CcHHHHHHhcCCCCCcceEeecc-----------CCCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEE
Q 019088 235 ----SSLLSQLAAAGNVRKEFAHCLDV-----------VKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEV 295 (346)
Q Consensus 235 ----~s~~~~l~~~g~i~~~FS~~l~~-----------~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v 295 (346)
.+++++|++|+.|+++||+||.+ ...+|.|+||++|+.+ +.|+|+. ...+|.|.+++|+|
T Consensus 146 ~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 224 (402)
T 3vf3_A 146 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 224 (402)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEEE
T ss_pred CCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEEE
Confidence 47999999999998999999964 1347999999999864 8899998 56899999999999
Q ss_pred cCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHH
Q 019088 296 GGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWI 342 (346)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~ 342 (346)
+++.+.++...+. ...+||||||+++++|.+++++|+++|.+..
T Consensus 225 ~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~ 268 (402)
T 3vf3_A 225 NGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAAS 268 (402)
T ss_dssp TTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHT
T ss_pred CCEEecccccccC---CCeEEEECCCCcccCCHHHHHHHHHHHhhhc
Confidence 9999876544321 4679999999999999999999999999874
No 29
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.4e-41 Score=323.00 Aligned_cols=211 Identities=24% Similarity=0.416 Sum_probs=180.9
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCccccccCCCCCCCcceecCCcccccccCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS--RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNN 154 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 154 (346)
++.+..|+++|.||||||++.|++||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~-------~~ydps~SsT~~~~~------------ 194 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK-------HLYDSSKSRTYEKDG------------ 194 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS-------CCBCGGGCTTCEEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC-------CcCCCccCCceeECC------------
Confidence 346789999999999999999999999999999999996 57554 689999999999865
Q ss_pred CCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeeccc--CCCCCCCCCCcceeeecCC
Q 019088 155 RYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQS--GDLGSSTDAAVDGILGFGQ 232 (346)
Q Consensus 155 ~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GilGLg~ 232 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++ +.|||+.... +.+. .....+||||||+
T Consensus 195 ----------~~~~i~YgdGs-~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 195 ----------TKVEMNYVSGT-VSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp ----------EEEEEECSSSE-EEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred ----------cEEEEEcCCCC-eEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 89999999999 899999999999975 456 9999999875 4321 1245799999998
Q ss_pred CCC------cHHHHHHhcCCCC-CcceEeeccC-CCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEe
Q 019088 233 ANS------SLLSQLAAAGNVR-KEFAHCLDVV-KGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPL 300 (346)
Q Consensus 233 ~~~------s~~~~l~~~g~i~-~~FS~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 300 (346)
+.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|++ ++.|+|+. .+.+|.|.++ |+|+++ +
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~-~ 329 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI-M 329 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-E
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-E
Confidence 643 6899999999997 9999999985 35899999999976 48999997 5689999999 999993 3
Q ss_pred cCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHH
Q 019088 301 DLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRF 340 (346)
Q Consensus 301 ~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~ 340 (346)
. ....+||||||+++++|++++++|++++.+
T Consensus 330 -~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~ 360 (453)
T 2bju_A 330 -L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDV 360 (453)
T ss_dssp -E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSC
T ss_pred -e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCC
Confidence 1 246799999999999999999999888754
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=7.9e-40 Score=304.82 Aligned_cols=210 Identities=22% Similarity=0.345 Sum_probs=175.8
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++..
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 66 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT-----GHDLYTPSSSA-TKLS----------------- 66 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT-----TSCCCBCCSSC-EECT-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC-----CCCCCCchhcC-CccC-----------------
Confidence 578899999999 8999999999999999999999865322 12689999998 4421
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 235 (346)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.+. .....+||||||++..
T Consensus 67 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 67 -----GYSWDISYGDGSSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp -----TCBEEEECSSSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred -----CCEEEEEeCCCCEEEEEEEEeEEEECCE--------EEcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 3799999999998899999999999975 356899999998755432 1245799999998643
Q ss_pred ------cHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecCCC
Q 019088 236 ------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (346)
Q Consensus 236 ------s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (346)
+++++|.++ +. ++||+||.+ +.+|.|+||++|++ ++.|+|+.....+|.|.+++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 488999987 65 999999987 46899999999975 58999998667899999999999997652
Q ss_pred CCcCCCCCCcEEEcccccccccCHHHHHHHHHHHH
Q 019088 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFR 339 (346)
Q Consensus 305 ~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~ 339 (346)
.....+||||||+++++|++++++|+++|.
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~ 235 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVS 235 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCC
Confidence 235679999999999999999999998873
No 31
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=2.7e-39 Score=307.48 Aligned_cols=234 Identities=23% Similarity=0.406 Sum_probs=181.2
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRY 156 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~ 156 (346)
++.+..|+++|.|||| |+|||||+++||+|..| .+++.+.|.+..|...++...
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~---------------------~~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGG---------------------QPPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTT---------------------CCCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCC---------------------CCCCccCCCCchhccccCCCC
Confidence 4567899999999997 99999999999998754 124456677777765443333
Q ss_pred CCCCC--------Cccc-eeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCccee
Q 019088 157 PSCSP--------GVRC-EYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGI 227 (346)
Q Consensus 157 ~~C~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~Gi 227 (346)
..|.. ++.| .|.+.|++|+.+.|.+++|+|+|++.++.........++.|||+....... ....+|||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~---~~~~~dGI 140 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS---LPRGSTGV 140 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTT---SCTTEEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCC---CCCCCceE
Confidence 35532 2346 599999999977999999999999754321111111124789998762211 12468999
Q ss_pred eecCCCCCcHHHHHHhcCCCCCcceEeeccCCCeeEEEeCCCCC------CCceEeeCcCC--CCceeEEEeEEEEcCEE
Q 019088 228 LGFGQANSSLLSQLAAAGNVRKEFAHCLDVVKGGGIFAIGDVVS------PKVKTTPMVPN--MPHYNVILEEVEVGGNP 299 (346)
Q Consensus 228 lGLg~~~~s~~~~l~~~g~i~~~FS~~l~~~~~~G~l~~Gg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v~~~~ 299 (346)
||||++..|++.||.++++++++||+||.+. .+|+|+||++|. +++.|+|++.+ ..+|.|.+++|+||++.
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTR 219 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEE
Confidence 9999999999999999987779999999874 789999999875 36999999854 24788999999999999
Q ss_pred ecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHHHh
Q 019088 300 LDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFWIA 343 (346)
Q Consensus 300 ~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~~~ 343 (346)
+.++...+. .+++||||||++++||+++|++|.++|.+++.
T Consensus 220 ~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~ 260 (381)
T 1t6e_X 220 VPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALA 260 (381)
T ss_dssp CCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhc
Confidence 877665443 46799999999999999999999999998763
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.9e-39 Score=302.02 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=174.7
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.|| ||++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS-----GHDYYTPGSSA-QKID----------------- 67 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TCCCBCCCTTC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc-----CCCCCCccccC-CccC-----------------
Confidence 468899999999 7999999999999999999999765321 12689999998 5532
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC---
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS--- 235 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 235 (346)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 68 -----GATWSISYGDGSSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEcCCCCeEEEEEEEEEEEECCE--------EECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 3899999999998899999999999975 356899999998754332 1135799999998643
Q ss_pred ------cHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCCC----ceEeeCcCCCCceeEEEeEEEEcCEEecCCC
Q 019088 236 ------SLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (346)
Q Consensus 236 ------s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (346)
+++++|+++ +. ++||+||.+ +.+|.|+||++|+++ +.|+|+.....+|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~--- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS--LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS--- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE---
T ss_pred CCCCCCCHHHHHHHh--ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc---
Confidence 588999987 65 999999987 468999999999875 899999866789999999999999 542
Q ss_pred CCcCCCCCCcEEEcccccccccCHHHHHHHHHHHH
Q 019088 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFR 339 (346)
Q Consensus 305 ~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~ 339 (346)
.....+||||||+++++|++++++|+++|.
T Consensus 206 -----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ 235 (323)
T 1izd_A 206 -----SDSITGIADTGTTLLLLDDSIVDAYYEQVN 235 (323)
T ss_dssp -----CCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCcceeCCHHHHHHHHHhCC
Confidence 235679999999999999999999998873
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.8e-39 Score=302.09 Aligned_cols=207 Identities=23% Similarity=0.362 Sum_probs=173.5
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPS 158 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~ 158 (346)
.+..|+++|.|| ||++.|+|||||+++||+|..|..|..+ .++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS-----GHSVYNPSATG-KELS----------------- 67 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCHHHHC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc-----CCCCCCcccCC-cccC-----------------
Confidence 467899999999 8999999999999999999999865322 12689999998 5532
Q ss_pred CCCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCC----
Q 019088 159 CSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQAN---- 234 (346)
Q Consensus 159 C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~---- 234 (346)
.|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++..++.+. .....+||||||++.
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 68 -----GYTWSISYGDGSSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 3899999999998899999999999975 356899999998755432 124579999999854
Q ss_pred -----CcHHHHHHhcCCCC-CcceEeeccCCCeeEEEeCCCCCC----CceEeeCcCCCCceeEEEeEEEEcCEEecCCC
Q 019088 235 -----SSLLSQLAAAGNVR-KEFAHCLDVVKGGGIFAIGDVVSP----KVKTTPMVPNMPHYNVILEEVEVGGNPLDLPT 304 (346)
Q Consensus 235 -----~s~~~~l~~~g~i~-~~FS~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 304 (346)
.+++++|+++ |. ++||+||.+ +.+|.|+||++|++ ++.|+|+..+..+|.|.+++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 2589999987 65 999999987 46899999999965 5899999866789999999999998 21
Q ss_pred CCcCCCCCCcEEEcccccccccCHHHHHHHHHHH
Q 019088 305 SLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQF 338 (346)
Q Consensus 305 ~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l 338 (346)
.....+||||||+++++|++++++|+++|
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i 233 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQV 233 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTS
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhC
Confidence 12457999999999999999999999887
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4.5e-38 Score=294.74 Aligned_cols=198 Identities=25% Similarity=0.404 Sum_probs=169.6
Q ss_pred CeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCccccccCCCCCCCcceecCCcccccccCCCCCCCC
Q 019088 80 TGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCSRCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTYNNRYPSC 159 (346)
Q Consensus 80 ~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~~~~C 159 (346)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 468999999999999999999999999999864 3799998876543
Q ss_pred CCCccceeEEEeCCCCeEeEEEEEEEEEEcccCCCccccCCCceeeEEeeecccCCCCCCCCCCcceeeecCCCCC----
Q 019088 160 SPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQASGNLKTAPLNSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS---- 235 (346)
Q Consensus 160 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~---- 235 (346)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ | ...+||||||++..
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 89999999998 899999999999875 456899999998754 3 24799999998643
Q ss_pred ----------cHHHHHHhcCCCC-CcceEeeccC----CCeeEEEeCCCCCC----CceEeeCcCC---CCceeEEEeEE
Q 019088 236 ----------SLLSQLAAAGNVR-KEFAHCLDVV----KGGGIFAIGDVVSP----KVKTTPMVPN---MPHYNVILEEV 293 (346)
Q Consensus 236 ----------s~~~~l~~~g~i~-~~FS~~l~~~----~~~G~l~~Gg~d~~----~~~~~p~~~~---~~~w~v~l~~i 293 (346)
+++++|+++|+|+ ++||+||.+. ...|.|+||++|++ ++.|+|+..+ ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 5799999999997 9999999863 34799999999975 5899999864 5789999 999
Q ss_pred EEcC-EEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 294 EVGG-NPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 294 ~v~~-~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
+|++ +.+.. ...+||||||+++++|++++++|.+++.++
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~ 235 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAV 235 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCE
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCE
Confidence 9998 77631 246999999999999999999999888754
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.8e-23 Score=159.04 Aligned_cols=84 Identities=32% Similarity=0.604 Sum_probs=76.4
Q ss_pred CCCCeeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCccccccCCCCCCCcceecCCcccccccC
Q 019088 77 PSATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCAGCS----RCPTKSDLGIKLTLFDPSKSSTSGEIACSDNFCRTTY 152 (346)
Q Consensus 77 ~~~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~ 152 (346)
++.+..|+++|.||||||+|.|+|||||+++||+|..|. .|..+ +.|||++|+|++...
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~-------~~y~p~~SsT~~~~~---------- 71 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH-------HKYNSDKSSTYVKNG---------- 71 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS-------CCBCGGGCTTCEEEE----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC-------CCCCchhCCCceeCC----------
Confidence 346789999999999999999999999999999999996 57654 589999999999876
Q ss_pred CCCCCCCCCCccceeEEEeCCCCeEeEEEEEEEEEEcc
Q 019088 153 NNRYPSCSPGVRCEYVVTYGDGSSTSGYFVRDIIQLNQ 190 (346)
Q Consensus 153 ~~~~~~C~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 190 (346)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 89999999999 89999999999976
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.85 E-value=3.4e-21 Score=171.43 Aligned_cols=131 Identities=22% Similarity=0.244 Sum_probs=109.5
Q ss_pred CceeeEEeeecccCCCCCCCCCCcceeeecCCCCC------cHHHHHHhcCCCC-CcceEeeccCC-C--eeEEEeCCCC
Q 019088 201 NSSVIFGCGNRQSGDLGSSTDAAVDGILGFGQANS------SLLSQLAAAGNVR-KEFAHCLDVVK-G--GGIFAIGDVV 270 (346)
Q Consensus 201 ~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~------s~~~~l~~~g~i~-~~FS~~l~~~~-~--~G~l~~Gg~d 270 (346)
++++.|||++...+.+. .....+||||||++.. +++++|+++|+|. ++||+||.+.. . +|.|+||++|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 46899999998766432 2456899999999754 5899999999997 99999998852 2 7999999999
Q ss_pred CCC----ceEeeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHHHHHHHHH
Q 019088 271 SPK----VKTTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLVLSQFRFW 341 (346)
Q Consensus 271 ~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l~~~l~~~ 341 (346)
+++ +.|+|+. ...+|.|.+++|+|+++.+. ......+||||||+++++|++++++|++++.+.
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 149 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAV 149 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCe
Confidence 864 8999998 57899999999999997642 123567999999999999999999999998653
No 37
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=86.67 E-value=0.65 Score=34.62 Aligned_cols=26 Identities=27% Similarity=0.226 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~ 111 (346)
++.|.|| +|.+.+++|||++++-+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 6789999 6999999999999999973
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=86.60 E-value=0.8 Score=33.74 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=24.2
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCAG 113 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (346)
++.|.|| +|.+.+++|||.+++-+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5679999 699999999999999997543
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.74 E-value=0.69 Score=36.56 Aligned_cols=31 Identities=13% Similarity=0.218 Sum_probs=27.1
Q ss_pred CCeeEEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019088 79 ATGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 79 ~~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~ 111 (346)
..+.+++++.|+ ++++.+++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 356789999998 6899999999999998864
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=83.84 E-value=1.3 Score=32.58 Aligned_cols=27 Identities=22% Similarity=0.118 Sum_probs=23.8
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~ 112 (346)
++.|.|| +|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5679999 79999999999999999654
No 41
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=82.39 E-value=1.1 Score=33.67 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=25.4
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCceeEeCCCC
Q 019088 84 FTKVGLG---TPTDEYYVQVDTGSDLLWVNCAGC 114 (346)
Q Consensus 84 ~~~i~iG---tP~q~~~v~lDTGS~~~Wv~~~~C 114 (346)
.+.|.|| +|+|.+..++|||.+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4556666 789999999999999999987543
No 42
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=79.90 E-value=1.5 Score=34.86 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=27.0
Q ss_pred CeeEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019088 80 TGLYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (346)
Q Consensus 80 ~~~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~ 112 (346)
...|++++.|. ++++.+++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 35689999998 69999999999999999764
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=78.43 E-value=2.1 Score=33.63 Aligned_cols=35 Identities=17% Similarity=0.409 Sum_probs=27.5
Q ss_pred CceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHH
Q 019088 284 PHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLV 334 (346)
Q Consensus 284 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l 334 (346)
+++.++ +.|+|+.+. ++||||++.+.++.+..+.+
T Consensus 25 ~~~~v~---v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp CCCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred ceEEEE---EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 345555 678998763 89999999999998887764
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=78.40 E-value=1.9 Score=32.71 Aligned_cols=25 Identities=20% Similarity=0.199 Sum_probs=22.3
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~ 111 (346)
++ |.|| +|.+.+++|||.+++-+..
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 44 9999 6999999999999999975
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.85 E-value=1.6 Score=34.68 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=27.5
Q ss_pred ceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHHHHH
Q 019088 285 HYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLYDLV 334 (346)
Q Consensus 285 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~~~l 334 (346)
.+.|+ ++|+|+.+. +++|||++.+.++.+..+.+
T Consensus 24 ~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 45555 558888764 89999999999999988875
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=74.05 E-value=3.3 Score=31.21 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=24.4
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNCAG 113 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (346)
.+.|.|| +|.+..++|||.+++-+...+
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5679999 799999999999999998654
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=68.42 E-value=5.3 Score=30.96 Aligned_cols=29 Identities=17% Similarity=0.077 Sum_probs=24.9
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 019088 82 LYFTKVGLGTPTDEYYVQVDTGSDLLWVNCA 112 (346)
Q Consensus 82 ~Y~~~i~iGtP~q~~~v~lDTGS~~~Wv~~~ 112 (346)
.-++.+.|+ +|++.+++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 357789999 69999999999999999754
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=62.87 E-value=6.2 Score=32.95 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=23.4
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~ 111 (346)
.+.|.|| +|.+.+++|||.+++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 6789999 7999999999999999864
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=60.76 E-value=7.6 Score=29.70 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=19.4
Q ss_pred eCCCCceEEEEEEcCCCceeEeCCC
Q 019088 89 LGTPTDEYYVQVDTGSDLLWVNCAG 113 (346)
Q Consensus 89 iGtP~q~~~v~lDTGS~~~Wv~~~~ 113 (346)
|| +|.+..++|||.+++-+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 588899999999999998643
No 50
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=57.50 E-value=7.6 Score=28.12 Aligned_cols=39 Identities=15% Similarity=0.344 Sum_probs=24.5
Q ss_pred eeCcC-CCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 277 TPMVP-NMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 277 ~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
.|+.. ....|.++ |.||. |++. ..++||||++.+++|..
T Consensus 5 ~~l~n~~~~~Y~~~---i~iGT-----P~Q~------~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNYMDAQYYGE---IGIGT-----PPQC------FTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTTEEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEBT
T ss_pred EeeEECCCCeEEEE---EEECC-----CCeE------EEEEEeCCCCceEEeEc
Confidence 45532 23456664 77773 2222 23899999999998854
No 51
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=49.40 E-value=15 Score=32.66 Aligned_cols=38 Identities=26% Similarity=0.408 Sum_probs=26.3
Q ss_pred eEeeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 275 KTTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 275 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
...|+. ....|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 7 ~~~~~~-~~~~Y~~~---i~iG~Q~~-------------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 7 TNTPTA-NDEEYITP---VTIGGTTL-------------NLNFDTGSADLWVFST 44 (323)
T ss_dssp EEEECG-GGSCEEEE---EEETTEEE-------------EEEEETTCCCEEECBT
T ss_pred eeeecC-CCCEEEEE---EEECCEEE-------------EEEEeCCCcceEEecC
Confidence 344543 44567655 77885554 2899999999999864
No 52
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=49.04 E-value=14 Score=33.21 Aligned_cols=38 Identities=26% Similarity=0.519 Sum_probs=24.2
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+|+......|.++ |.||. |++. ..++||||++.+++|.
T Consensus 5 ~~l~n~~~~Y~~~---i~iGT-----P~q~------~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 5 VPATNQLVDYVVN---VGVGS-----PATT------YSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEECSSCEEEE---EEETT-----TTEE------EEEEEETTCCCCEECS
T ss_pred EeeeccCcEEEEE---EEECC-----CCcE------EEEEEeCCChhheecC
Confidence 4554334467665 77773 2221 2389999999999874
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=49.04 E-value=16 Score=32.48 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=26.2
Q ss_pred eEeeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 275 KTTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 275 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
..+|+. ....|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 6 ~~~~~~-~~~~Y~~~---i~iG~Q~~-------------~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 6 VTTPQN-NDEEYLTP---VTVGKSTL-------------HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEECT-TTSCEEEE---EEEBTEEE-------------EEEEETTCCCEEEECT
T ss_pred EeEEcC-CCCEEEEE---EEECCEEE-------------EEEEeCCCccceEeeC
Confidence 344543 45567665 67775554 2899999999998754
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=48.64 E-value=16 Score=32.51 Aligned_cols=38 Identities=29% Similarity=0.404 Sum_probs=26.2
Q ss_pred eEeeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 275 KTTPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 275 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
...|+. ....|.++ |.||.+.+ .++||||++.+++|..
T Consensus 7 ~~~~~~-~~~~Y~~~---i~iG~q~~-------------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 7 TTNPTS-NDEEYITQ---VTVGDDTL-------------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEECG-GGCCEEEE---EEETTEEE-------------EEEEETTCCCEEECBT
T ss_pred eeeEcC-CCCEEEEE---EEECCEEE-------------EEEEcCCCcceEEecC
Confidence 344543 44567655 77885554 2899999999999864
No 55
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=48.49 E-value=11 Score=27.88 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=25.3
Q ss_pred eeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHHHH
Q 019088 286 YNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPMLY 331 (346)
Q Consensus 286 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~~~ 331 (346)
|.=++..++|+|+.+. +++|||+-.+.+.....
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 4445566999998763 89999999998886544
No 56
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=48.05 E-value=12 Score=33.54 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=25.3
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+|+......|.++ |.||. |++. ..+++|||++.+++|.
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~Q~------~~v~~DTGSs~~Wv~~ 42 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGS-----NKQQ------QTVIIDTGSSDFWVVD 42 (339)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcC-----CCcE------EEEEEeCCCCceEEec
Confidence 4665455677766 67773 2221 2389999999999873
No 57
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=47.65 E-value=12 Score=33.47 Aligned_cols=38 Identities=21% Similarity=0.409 Sum_probs=24.7
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+|+......|.++ |.||. |++. ..+++|||++.+++|.
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~------~~v~~DTGSs~~Wv~~ 42 (334)
T 1j71_A 5 TTLINEGPSYAAD---IVVGS-----NQQK------QTVVIDTGSSDLWVVD 42 (334)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEE
T ss_pred EEEecCCcEEEEE---EEEcC-----CCcE------EEEEEcCCCCCEEEec
Confidence 4554444567765 67773 2222 2389999999999874
No 58
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=47.21 E-value=11 Score=27.63 Aligned_cols=30 Identities=17% Similarity=0.437 Sum_probs=23.3
Q ss_pred eeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 286 YNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 286 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
|.=++..++|+|+.+. +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 5555667999998763 89999999887753
No 59
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=45.85 E-value=13 Score=27.98 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=24.9
Q ss_pred ceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 285 HYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 285 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
.|.=++. ++|+|+.+. +++|||+-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 5777778 999999763 89999999888764
No 60
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=45.35 E-value=14 Score=33.19 Aligned_cols=38 Identities=18% Similarity=0.378 Sum_probs=24.2
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+|+......|.++ |.||. |++. ..++||||++.+++|.
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~------~~v~~DTGSs~~Wv~~ 42 (342)
T 2qzx_A 5 VTLHNEAITYTAD---ITVGS-----DNQK------LNVIVDTGSSDLWIPD 42 (342)
T ss_dssp EEEEECSSCEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEE
T ss_pred EEEecCCeEEEEE---EEECC-----CCcE------EEEEEeCCCCCeEEec
Confidence 3444344567765 67773 2221 2389999999999873
No 61
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=43.81 E-value=14 Score=26.94 Aligned_cols=30 Identities=13% Similarity=0.388 Sum_probs=23.5
Q ss_pred ceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccC
Q 019088 285 HYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLP 327 (346)
Q Consensus 285 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp 327 (346)
.|.=++..++|+|+.+. +++|||+-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 35556677999999874 8999999887764
No 62
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=41.16 E-value=18 Score=32.40 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=24.3
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+|+......|.++ |.||. |++. ..+++|||++.+++|.
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~------~~v~~DTGSs~~Wv~~ 42 (342)
T 3pvk_A 5 VTLHNEQVTYAAD---ITVGS-----NNQK------LNVIVDTGSSDLWVPD 42 (342)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEE
T ss_pred eEEecCCcEEEEE---EEEcC-----CCcE------EEEEEECCCcceEEEc
Confidence 3444344567766 67773 2222 2389999999999874
No 63
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=39.75 E-value=23 Score=27.26 Aligned_cols=26 Identities=27% Similarity=0.562 Sum_probs=20.9
Q ss_pred EeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 290 LEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 290 l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
+..++|+|+.+. +++|||...+.++.
T Consensus 24 ~v~i~I~G~~~~-------------~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVGGQPVT-------------FLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEECS
T ss_pred EEEEEECCEEEE-------------EEEeCCCCeEEEcc
Confidence 345889998763 89999999998865
No 64
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=39.10 E-value=31 Score=30.65 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=22.9
Q ss_pred CCCceeEEEeEEEEc--CEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 282 ~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
....|.++ |.|| .+.+ .++||||++.+++|..
T Consensus 13 ~~~~Y~~~---i~iGTP~Q~~-------------~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 13 ADSEYITS---VSIGTPAQVL-------------PLDFDTGSSDLWVFSS 46 (329)
T ss_dssp TCCCEEEE---EEETTTTEEE-------------EEEEETTCCCEEECBT
T ss_pred CCCEEEEE---EEECCCCeEE-------------EEEEcCCCCCeEEecC
Confidence 44567654 7787 3333 3899999999999864
No 65
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=38.64 E-value=26 Score=29.13 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=23.2
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeC
Q 019088 84 FTKVGLGTPTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 84 ~~~i~iGtP~q~~~v~lDTGS~~~Wv~~ 111 (346)
.+.+.|| +|.+..++|||.+++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 6789999 6999999999999999864
No 66
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=37.43 E-value=37 Score=30.15 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=22.9
Q ss_pred CCCceeEEEeEEEEc--CEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 282 ~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
....|.++ |.|| .+.+ .++||||++.+++|..
T Consensus 13 ~~~~Y~~~---i~iGTP~Q~~-------------~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 13 LDDAYITP---VQIGTPAQTL-------------NLDFDTGSSDLWVFSS 46 (329)
T ss_dssp TCCCEEEE---EEETTTTEEE-------------EEEEETTCCCEEECBT
T ss_pred CCCEEEEE---EEECCCCeEE-------------EEEECCCCCCeEEecC
Confidence 45567654 7787 3333 3899999999999853
No 67
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=33.71 E-value=34 Score=30.82 Aligned_cols=40 Identities=23% Similarity=0.522 Sum_probs=26.7
Q ss_pred ceEeeCcC-CCCceeEEEeEEEEc--CEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 274 VKTTPMVP-NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 274 ~~~~p~~~-~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
+...|+.. ....|.++ |.|| .+.+ .++||||++.+++|..
T Consensus 7 ~~~~~l~~~~~~~Y~~~---i~iGtP~q~~-------------~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAIP---VSIGTPGQDF-------------YLLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEEEEEETTTTEEEEE---EEETTTTEEE-------------EEEEETTCCCCEEEBT
T ss_pred cceEEeecCCCCEEEEE---EEECCCCcEE-------------EEEEcCCCCCeEECCC
Confidence 34566653 24567665 7777 3333 3899999999998754
No 68
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=33.63 E-value=37 Score=30.12 Aligned_cols=31 Identities=23% Similarity=0.389 Sum_probs=22.3
Q ss_pred CCCceeEEEeEEEEc--CEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 282 NMPHYNVILEEVEVG--GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 282 ~~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
....|.++ |.|| .+.+ .+++|||++.+++|.
T Consensus 13 ~~~~Y~~~---i~iGTP~q~~-------------~v~~DTGSs~lWv~~ 45 (325)
T 2apr_A 13 NDIEYYGQ---VTIGTPGKKF-------------NLDFDTGSSDLWIAS 45 (325)
T ss_dssp TTTEEEEE---EEETTTTEEE-------------EEEEETTCCCCEEEB
T ss_pred CCCEEEEE---EEECCCCeEE-------------EEEEcCCCCCEEEcc
Confidence 44567665 7777 3333 389999999999875
No 69
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=32.12 E-value=31 Score=30.59 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=24.7
Q ss_pred eeCcCCCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 277 TPMVPNMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 277 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
.|+......|.++ |.||. |++. ..+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~q~------~~v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 5 EPMAYMDAAYFGE---ISIGT-----PPQN------FLVLFDTGSSNLWVPSV 43 (329)
T ss_dssp CGGGGTTCCEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEBT
T ss_pred eeeEEcCCEEEEE---EEECC-----CCcE------EEEEEcCCCccEEEecC
Confidence 3444234567766 67773 2222 23899999999998753
No 70
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=30.60 E-value=43 Score=29.55 Aligned_cols=41 Identities=17% Similarity=0.357 Sum_probs=25.5
Q ss_pred eEeeCcC-CCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 275 KTTPMVP-NMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 275 ~~~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
...|+.. .+..|.++ |.||. |++. ..+++|||++.+++|..
T Consensus 4 ~~~~l~n~~~~~Y~~~---i~iGt-----P~q~------~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGK---IYLGT-----PPQE------FTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEEETTTEEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEBT
T ss_pred ceeeeEeccCCEEEEE---EEECC-----CCeE------EEEEEeCCccceEEcCC
Confidence 3455542 23467665 67773 2222 23899999999998853
No 71
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=30.03 E-value=43 Score=28.23 Aligned_cols=31 Identities=19% Similarity=0.097 Sum_probs=22.7
Q ss_pred eeEEEE---EEeCC-----CCceEEEEEEcCCCceeEeC
Q 019088 81 GLYFTK---VGLGT-----PTDEYYVQVDTGSDLLWVNC 111 (346)
Q Consensus 81 ~~Y~~~---i~iGt-----P~q~~~v~lDTGS~~~Wv~~ 111 (346)
+.|.++ |.||. +.....++||||++.+++|.
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 345554 66775 23457899999999999986
No 72
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.95 E-value=34 Score=31.42 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=25.3
Q ss_pred EeeCcC--CCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 276 TTPMVP--NMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 276 ~~p~~~--~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
..|+.. ....|.++ |.||. |++. ..++||||++.+++|..
T Consensus 11 ~~pl~~~~~~~~Y~~~---i~iGT-----P~Q~------~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWAN---LQKRT-----PLMQ------VPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEEE---EEETT-----TTEE------EEEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEEE---EECCC-----CCce------eEEEEECCCCceeECCC
Confidence 355542 23467664 66773 2222 23899999999998754
No 73
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=28.91 E-value=33 Score=30.55 Aligned_cols=31 Identities=19% Similarity=0.291 Sum_probs=22.8
Q ss_pred CCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 283 MPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 283 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
...|.++ |.||.+.+ .+++|||++.+++|..
T Consensus 16 ~~~Y~~~---i~iG~Q~~-------------~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 16 NTQYAGI---TKIGNQNF-------------LTVFDSTSCNVVVASQ 46 (330)
T ss_dssp CTTSEEE---EEETTEEE-------------EEEEETTCCCEEEECT
T ss_pred CCEEEEE---EEECCEEE-------------EEEEeCCCcceEEecC
Confidence 3467765 77885554 2899999999998753
No 74
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=25.05 E-value=61 Score=28.57 Aligned_cols=16 Identities=19% Similarity=0.434 Sum_probs=13.8
Q ss_pred cEEEcccccccccCHH
Q 019088 314 GTIIDSGTTLAYLPPM 329 (346)
Q Consensus 314 ~~iiDTGts~~~lp~~ 329 (346)
.+++|||++.+++|..
T Consensus 28 ~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 28 KVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEETTCCCEEECBT
T ss_pred EEEEeCCCcceEEecC
Confidence 3899999999999854
No 75
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=24.89 E-value=42 Score=30.06 Aligned_cols=39 Identities=21% Similarity=0.440 Sum_probs=24.7
Q ss_pred eeCcC-CCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 277 TPMVP-NMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 277 ~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
.|+.. ....|.++ |.||. |++. ..+++|||++.+++|..
T Consensus 15 ~~l~n~~~~~Y~~~---i~iGt-----P~Q~------~~v~~DTGSs~lWv~~~ 54 (351)
T 1tzs_A 15 EPLINYLDMEYFGT---ISIGS-----PPQN------FTVIFDTGSSNLWVPSV 54 (351)
T ss_dssp CTTGGGSSSCCCEE---EEETT-----TTEE------EEEEEETTCCCEEEEBT
T ss_pred eeceecCCCEEEEE---EEECC-----CCeE------EEEEEeCCCcceEEecC
Confidence 45542 23467665 77773 2221 23899999999998753
No 76
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=22.40 E-value=73 Score=26.57 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=23.4
Q ss_pred eeEEE---EEEeCCC----CceEEEEEEcCCCceeEeCC
Q 019088 81 GLYFT---KVGLGTP----TDEYYVQVDTGSDLLWVNCA 112 (346)
Q Consensus 81 ~~Y~~---~i~iGtP----~q~~~v~lDTGS~~~Wv~~~ 112 (346)
..|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 34544 4668752 24578999999999999874
No 77
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=22.16 E-value=44 Score=25.00 Aligned_cols=28 Identities=14% Similarity=0.382 Sum_probs=20.6
Q ss_pred EEEeEEEEc-----CEEecCCCCCcCCCCCCcEEEcccccccccCH
Q 019088 288 VILEEVEVG-----GNPLDLPTSLLGTGDERGTIIDSGTTLAYLPP 328 (346)
Q Consensus 288 v~l~~i~v~-----~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~ 328 (346)
=.+..|+|+ |+.+ .+++|||.-.+.++.
T Consensus 10 RPlvtikI~~~~~~Gq~~-------------eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 10 RPVIKAQVDTQTSHPKTI-------------EALLDTGADMTVIPI 42 (116)
T ss_dssp CCEEEEEEECSSSCCEEE-------------EEEECTTBSSCEEEG
T ss_pred CCeEEEEEccccCCCeEe-------------EEEeccCCCccEEec
Confidence 345567787 6654 389999999888764
No 78
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=22.11 E-value=60 Score=30.48 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=25.4
Q ss_pred EeeCcC-CCCceeEEEeEEEEcCEEecCCCCCcCCCCCCcEEEcccccccccCHH
Q 019088 276 TTPMVP-NMPHYNVILEEVEVGGNPLDLPTSLLGTGDERGTIIDSGTTLAYLPPM 329 (346)
Q Consensus 276 ~~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~~iiDTGts~~~lp~~ 329 (346)
..|+.. ....|.++ |.||. |++. ..+++|||++.+++|..
T Consensus 129 ~~~L~n~~~~~Y~~~---I~IGT-----P~Q~------~~vi~DTGSs~lWV~~~ 169 (453)
T 2bju_A 129 NIELVDFQNIMFYGD---AEVGD-----NQQP------FTFILDTGSANLWVPSV 169 (453)
T ss_dssp EEEEEEETTTEEEEE---EEETT-----TTEE------EEEEEETTCCCEEEEBT
T ss_pred ceeeEecCCCEEEEE---EEECC-----CCeE------EEEEEECCCcceEEecc
Confidence 355542 23567765 66773 2222 23899999999998864
No 79
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=20.09 E-value=61 Score=28.62 Aligned_cols=14 Identities=29% Similarity=0.769 Sum_probs=12.8
Q ss_pred EEEcccccccccCH
Q 019088 315 TIIDSGTTLAYLPP 328 (346)
Q Consensus 315 ~iiDTGts~~~lp~ 328 (346)
+++|||++.+++|.
T Consensus 30 v~~DTGSs~lWv~~ 43 (329)
T 1dpj_A 30 VILDTGSSNLWVPS 43 (329)
T ss_dssp EEEETTCCCEEEEB
T ss_pred EEEeCCCcCeEEec
Confidence 89999999999875
Done!