BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019089
(346 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 34/73 (46%)
Query: 258 KMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 317
K P RL EI LIV G DR VP RL I GS + ++CGH Q E
Sbjct: 216 KQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHA 275
Query: 318 EEFVSIVARFLQR 330
+ F +V FL R
Sbjct: 276 DAFNQLVLNFLAR 288
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 1 MVLFHGFGASVFSW---NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK 57
+VL HG G W +R + PL + +V+ D P +G + V ++ ++
Sbjct: 39 VVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSVV-------NSGSRS 90
Query: 58 PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
LN +L ++ +D L K L+G+S G +V + PERV
Sbjct: 91 DLNA-----RILKSV--VDQLDIAKIHLLGNSMGGHSSVAFTLKWPERV 132
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+ L HGF S FSW + LA+ +VLA D +G D+ + +
Sbjct: 259 LCLCHGFPESWFSWRYQIPALAQA-GFRVLAIDMKGYG-------------DSSSPPEIE 304
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y+M + F+D L +A+ +GH ++ N PERV
Sbjct: 305 EYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERV 350
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 328
+I P L+VT + D ++ ++ + + IP I++CGH Q EK E I+ ++L
Sbjct: 482 KILVPALMVTAEKDIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWL 541
Query: 329 Q 329
Q
Sbjct: 542 Q 542
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 218 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 277
Query: 326 RFLQRA 331
FL+ A
Sbjct: 278 DFLRHA 283
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG++ G A+N E P+R+
Sbjct: 94 LMDALDIDRAHLVGNAMGGATALNFALEYPDRI 126
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 280
Query: 326 RFLQRA 331
FL+ A
Sbjct: 281 DFLRHA 286
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG++ G A+N E P+R+
Sbjct: 97 LMDALDIDRAHLVGNAMGGATALNFALEYPDRI 129
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CGH Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVI 280
Query: 326 RFLQRA 331
FL+ A
Sbjct: 281 DFLRHA 286
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG+S G A+N E P+R+
Sbjct: 97 LMDALDIDRAHLVGNSMGGATALNFALEYPDRI 129
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+ L HGF S +SW + LA+ +VLA D +G +S P+ E
Sbjct: 42 VCLCHGFPESWYSWRYQIPALAQA-GYRVLAMDMKGYGESSA-------PPEIEE----- 88
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y M + F+D L +A+ +GH G ++ PERV
Sbjct: 89 -YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERV 133
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 328
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 264 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 323
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+ L HGF S +SW + LA+ +VLA D +G +S P+ E
Sbjct: 57 VCLCHGFPESWYSWRYQIPALAQA-GYRVLAMDMKGYGESSA-------PPEIEE----- 103
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y M + F+D L +A+ +GH G ++ PERV
Sbjct: 104 -YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERV 148
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 328
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 279 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 338
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+ L HGF S +SW + LA+ +VLA D +G +S P+ E
Sbjct: 261 VCLCHGFPESWYSWRYQIPALAQA-GYRVLAMDMKGYGESSA-------PPEIEE----- 307
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y M + F+D L +A+ +GH G ++ PERV
Sbjct: 308 -YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERV 352
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 328
+I P L+VT + D ++ ++ + IP I++CGH Q +K E I+ ++L
Sbjct: 483 KILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWL 542
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 254 DNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQ 313
D E+ M + + ++ + PVL++ G DR+ P A + IP + V CGH Q
Sbjct: 216 DFEAGM---MWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQ 272
Query: 314 EEKVEEFVSIVARFL 328
EK +EF + FL
Sbjct: 273 VEKFDEFNKLTIEFL 287
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 15/106 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSS-KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPL 59
+VL HG G SW + +A VLA D+P +G + + Q
Sbjct: 39 VVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQ----------F 88
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPER 105
N Y+ +A D L + LVG++ G AV + P R
Sbjct: 89 NRYA----AMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPAR 130
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 254 DNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQ 313
D E+ M + + ++ + PVL++ G DR+ P A + IP + V CGH Q
Sbjct: 236 DFEAGM---MWREVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQ 292
Query: 314 EEKVEEFVSIVARFL 328
EK +EF + FL
Sbjct: 293 VEKFDEFNKLTIEFL 307
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 15/106 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSS-KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPL 59
+VL HG G SW + +A VLA D+P +G + + Q
Sbjct: 59 VVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQ----------F 108
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPER 105
N Y+ +A D L + LVG+S G AV + P R
Sbjct: 109 NRYA----AMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPAR 150
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGQWAQWEHADEFNRLVI 280
Query: 326 RFLQRA 331
FL+ A
Sbjct: 281 DFLRHA 286
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG++ G A+N E P+R+
Sbjct: 97 LMDALDIDRAHLVGNAMGGATALNFALEYPDRI 129
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGQWAQWEHADEFNRLVI 280
Query: 326 RFLQRA 331
FL+ A
Sbjct: 281 DFLRHA 286
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG+S G A+N E P+R+
Sbjct: 97 LMDALDIDRAHLVGNSMGGATALNFALEYPDRI 129
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 325
RL EI I G DR VP + +L I + V CG Q E +EF +V
Sbjct: 221 RLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGAWAQWEHADEFNRLVI 280
Query: 326 RFLQRA 331
FL+ A
Sbjct: 281 DFLRHA 286
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+D L ++A LVG++ G A+N E P+R+
Sbjct: 97 LMDALDIDRAHLVGNAMGGATALNFALEYPDRI 129
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 249 AALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC 308
A L D + P L RL EI P LI+ G+ D A++++ IP S ++I
Sbjct: 185 AKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQI-AKKMANLIPNSKCKLISAT 243
Query: 309 GHVPQEEKVEEFVSIVARFLQR 330
GH E +EF +++ FL+
Sbjct: 244 GHTIHVEDSDEFDTMILGFLKE 265
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S +SW + LA +V+A D+ +G +S+ +
Sbjct: 36 VVLLHGFPESWYSWRHQIPALAGA-GYRVVAIDQRGYGRSSKY-------------RVQK 81
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y + V + +D AE+A +VGH GA VA + P+R
Sbjct: 82 AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRC 127
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S +SW + LA +V+A D+ +G +S+ +
Sbjct: 30 VVLLHGFPESWYSWRHQIPALAGA-GYRVVAIDQRGYGRSSKY-------------RVQK 75
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y + V + +D AE+A +VGH GA VA + P+R
Sbjct: 76 AYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRC 121
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 327 FLQ 329
FLQ
Sbjct: 252 FLQ 254
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 327 FLQ 329
FLQ
Sbjct: 252 FLQ 254
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed With
A Product Analogue
Length = 254
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
L + CP LIV G+ D +VP ++A+ + + + GS ++ H +EF +
Sbjct: 192 LPRVQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAED 251
Query: 327 FLQ 329
FLQ
Sbjct: 252 FLQ 254
>pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium
Smegmatis
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 265 KRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 323
RL +++ PVL++ G+ D P +W + IP V H EK EEF ++
Sbjct: 257 DRLPDVTAPVLVIAGEHDEATPKTW--QPFVDHIPDVRSHVFPGTSHCTHLEKPEEFRAV 314
Query: 324 VARFLQR 330
VA+FL +
Sbjct: 315 VAQFLHQ 321
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 328
+I L+V G D +VP ++ + I GS E+++ GH EK EEFV I FL
Sbjct: 145 KIRQKTLLVWGSKDHVVPIALSKEYASIISGSRLEIVEGSGHPVYIEKPEEFVRITVDFL 204
Query: 329 Q 329
+
Sbjct: 205 R 205
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 275 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 331
LI+ G D++VP ++ RL I + V CGH Q E+ + F +V F A
Sbjct: 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 19/109 (17%)
Query: 1 MVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK 57
++L HG G V + W + L+K +V+A D FG T R P+ N
Sbjct: 28 VILIHGSGPGVSAYANWRLTIPALSKFY--RVIAPDMVGFGFTDR--------PENYN-- 75
Query: 58 PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
YS V + +D L EKA +VG++ G +A+ + ERV
Sbjct: 76 ----YSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERV 120
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 275 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 331
LI+ G D++VP ++ RL I + V CGH Q E+ + F +V F A
Sbjct: 217 LIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFFNEA 273
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 19/109 (17%)
Query: 1 MVLFHGFGASVFS---WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKK 57
++L HG G V + W + L+K +V+A D FG T R P+ N
Sbjct: 28 VILIHGSGPGVSAYANWRLTIPALSKFY--RVIAPDMVGFGFTDR--------PENYN-- 75
Query: 58 PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
YS V + +D L EKA +VG+S G +A+ + ERV
Sbjct: 76 ----YSKDSWVDHIIGIMDALEIEKAHIVGNSFGGGLAIATALRYSERV 120
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
+ ++ P L+V G D++VP A + I S +I +CGH E E+F +
Sbjct: 218 IRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDDSWGYIIPHCGHWAMIEHPEDFANATLS 277
Query: 327 FL 328
FL
Sbjct: 278 FL 279
>pdb|4DNP|A Chain A, Crystal Structure Of Dad2
Length = 269
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG-LTSRVFPFQQPTPDTENKKPL 59
+VL HGFG +WNR + + +V+ +D G + F F++ T L
Sbjct: 23 LVLAHGFGTDQSAWNRILPFFLR--DYRVVLYDLVCAGSVNPDFFDFRRYT-------TL 73
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE 104
+PY V L+ +D L + VGHS A++ + + PE
Sbjct: 74 DPY-----VDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPE 113
>pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|B Chain B, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|C Chain C, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|D Chain D, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|E Chain E, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|F Chain F, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|G Chain G, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|H Chain H, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|I Chain I, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|J Chain J, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|K Chain K, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|L Chain L, Crystal Structure Of Dad2 S96a Mutant
Length = 269
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG-LTSRVFPFQQPTPDTENKKPL 59
+VL HGFG +WNR + + +V+ +D G + F F++ T L
Sbjct: 23 LVLAHGFGTDQSAWNRILPFFLR--DYRVVLYDLVCAGSVNPDFFDFRRYT-------TL 73
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE 104
+PY V L+ +D L + VGH+ A++ + + PE
Sbjct: 74 DPY-----VDDLLHILDALGIDCCAYVGHAVSAMIGILASIRRPE 113
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HG+ + W++ + PLA+ V+ D FG + + PD + L+
Sbjct: 32 LLLLHGWPGFWWEWSKVIGPLAEHYD--VIVPDLRGFGDSEK--------PDLND---LS 78
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALV 94
YS+ + +D L EKA +VGH A+V
Sbjct: 79 KYSLDKAADDQAALLDALGIEKAYVVGHDFAAIV 112
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 265 KRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 323
K L + + P LI+ GD+D VP ++ + AIP S +IK H +EF
Sbjct: 215 KDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIPNSKVALIKGGPHGLNATHAKEFNEA 274
Query: 324 VARFLQ 329
+ FL+
Sbjct: 275 LLLFLK 280
>pdb|3RM3|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257
pdb|3RLI|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257 In Complex With Pmsf
Length = 270
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVI--KNCGHV 311
+L I CP LI D D +VP NA+ + + I + E++ +N HV
Sbjct: 200 KLDRIVCPALIFVSDEDHVVPPGNADIIFQGISSTEKEIVRLRNSYHV 247
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S SW R L +V+ +DR FG +S QPT +
Sbjct: 27 VVLIHGFPLSGHSWERQSAALLD-AGYRVITYDRRGFGQSS------QPTTGYD------ 73
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAG 91
Y + L T+ ++ L + A+LVG S G
Sbjct: 74 -YDTFAADLNTV--LETLDLQDAVLVGFSMG 101
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco
Sabp2 As A Methylsalicylate Esterase And Further
Implicate It In Plant Innate Immunity, Northeast
Structural Genomics Target Ar2241
Length = 268
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
VL HG +SW + +KPL + KV A D A G R E + L
Sbjct: 7 FVLVHGACHGGWSWYK-LKPLLEAAGHKVTALDLAASGTDLR---------KIEELRTLY 56
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGA 92
Y++ L D EK ILVGHS G
Sbjct: 57 DYTLPLXELXESLSAD----EKVILVGHSLGG 84
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 14/92 (15%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
VL HG +SW + +KPL + KV A D A G R E + L
Sbjct: 7 FVLVHGACHGGWSWYK-LKPLLEAAGHKVTALDLAASGTDLR---------KIEELRTLY 56
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGA 92
Y++ L D EK ILVGHS G
Sbjct: 57 DYTLPLXELXESLSAD----EKVILVGHSLGG 84
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S SW R L +V+ +DR FG +S QPT +
Sbjct: 26 VVLIHGFPLSGHSWERQSAALLD-AGYRVITYDRRGFGQSS------QPTTGYD------ 72
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAG 91
Y + L T+ ++ L + A+LVG S G
Sbjct: 73 -YDTFAADLNTV--LETLDLQDAVLVGFSTG 100
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 256 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 314
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 315 EKVEEFVSIVARFLQRA 331
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKRG 272
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S SW R L +V+ +DR FG +S QPT +
Sbjct: 26 VVLIHGFPLSGHSWERQSAALLD-AGYRVITYDRRGFGQSS------QPTTGYD------ 72
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAG 91
Y + L T+ ++ L + A+LVG S G
Sbjct: 73 -YDTFAADLNTV--LETLDLQDAVLVGFSMG 100
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 16/91 (17%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGF S SW R L +V+ +DR FG +S QPT +
Sbjct: 26 VVLIHGFPLSGHSWERQSAALLD-AGYRVITYDRRGFGQSS------QPTTGYD------ 72
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAG 91
Y + L T+ ++ L + A+LVG S G
Sbjct: 73 -YDTFAADLNTV--LETLDLQDAVLVGFSMG 100
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 314
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 315 EKVEEFVSIVARFLQR 330
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 314
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 315 EKVEEFVSIVARFLQR 330
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 314
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 315 EKVEEFVSIVARFLQR 330
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 ESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL-SRAIPGSTFEVIKNCGHVPQE 314
E+ P +AK I P L++ GD D+IVP ++ + I G+ +V K+ H
Sbjct: 200 ETDFRPDMAK----IDVPTLVIHGDGDQIVPFETTGKVAAELIKGAELKVYKDAPHGFAV 255
Query: 315 EKVEEFVSIVARFLQR 330
++ + FL+R
Sbjct: 256 THAQQLNEDLLAFLKR 271
>pdb|1Q0R|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (Rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin T (Dcmat)
pdb|1Q0Z|A Chain A, Crystal Structure Of Aclacinomycin Methylesterase (rdmc)
With Bound Product Analogue, 10-
Decarboxymethylaclacinomycin A (dcma)
Length = 298
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 261 PPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGH 310
P A L E++ P L++ + D I P+ + + L+ IP + I GH
Sbjct: 227 PSRAAELREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPTARLAEIPGMGH 276
>pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3V|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3W|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3W|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3X|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R3X|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R40|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
pdb|3R40|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
Length = 306
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HGF + W+R LA+ KV+ D P +G + +Q TP T+
Sbjct: 36 LLLLHGFPQTHVMWHRVAPKLAERF--KVIVADLPGYGWSDMPESDEQHTPYTKR----- 88
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+MA ++ + + L L GH+ GA V+ ++P R+
Sbjct: 89 --AMAKQLIEAM---EQLGHVHFALAGHNRGARVSYRLALDSPGRL 129
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HGF + W+R LA+ KV+ D P +G + +Q TP T+
Sbjct: 36 LLLLHGFPQTHVMWHRVAPKLAERF--KVIVADLPGYGWSDMPESDEQHTPYTKR----- 88
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+MA ++ + + L L GH GA V+ ++P R+
Sbjct: 89 --AMAKQLIEAM---EQLGHVHFALAGHDRGARVSYRLALDSPGRL 129
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HGF + W+R LA+ KV+ D P +G + +Q TP T+
Sbjct: 36 LLLLHGFPQTHVMWHRVAPKLAERF--KVIVADLPGYGWSDMPESDEQHTPYTKR----- 88
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+MA ++ + + L L GH GA V+ ++P R+
Sbjct: 89 --AMAKQLIEAM---EQLGHVHFALAGHDRGARVSYRLALDSPGRL 129
>pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
pdb|3R3Y|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
Length = 306
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HGF + W+R LA+ KV+ D P +G + +Q TP T+
Sbjct: 36 LLLLHGFPQTHVMWHRVAPKLAERF--KVIVADLPGYGWSDMPESDEQHTPYTKR----- 88
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
+MA ++ + + L L GH GA V+ ++P R+
Sbjct: 89 --AMAKQLIEAM---EQLGHVHFALAGHXRGARVSYRLALDSPGRL 129
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 265 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIV 324
+ L +++ P LI+ D I P+ + + + +P S+ + ++ GH P +E + ++
Sbjct: 204 EDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYSSLKQMEARGHCPHMSHPDETIQLI 263
Query: 325 ARFLQ 329
+L+
Sbjct: 264 GDYLK 268
>pdb|3V48|A Chain A, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
pdb|3V48|B Chain B, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
Length = 268
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 270 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320
I CPV I+ D +VP+ + L A+P S V GH E F
Sbjct: 199 IRCPVQIICASDDLLVPTACSSELHAALPDSQKXVXPYGGHACNVTDPETF 249
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSR----VFPFQQPTPDTENKK 57
VL HG + W + +KPL ++ KV A D A G+ R + F+ + +
Sbjct: 14 VLVHGGCLGAWIWYK-LKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFR------DYSE 66
Query: 58 PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGAL---VAVNSYFEAPERV 106
PL V+A+ I EK +L+GHS G + +A+ +Y PE++
Sbjct: 67 PL------MEVMAS-----IPPDEKVVLLGHSFGGMSLGLAMETY---PEKI 104
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNP 61
VL HG + W + +KPL ++ KV A D A G+ R D +PL
Sbjct: 14 VLVHGGCLGAWIWYK-LKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDY--SEPL-- 68
Query: 62 YSMAFSVLATLYFIDILAAEKAILVGHSAGAL---VAVNSYFEAPERV 106
V+A+ I EK +L+GHS G + +A+ +Y PE++
Sbjct: 69 ----MEVMAS-----IPPDEKVVLLGHSFGGMSLGLAMETY---PEKI 104
>pdb|4IH4|A Chain A, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|B Chain B, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|C Chain C, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|D Chain D, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
Length = 267
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 15/105 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG-LTSRVFPFQQPTPDTENKKPL 59
+ L HGFG +W+ + T + +V+ +D G + F F + T L
Sbjct: 22 LFLAHGFGTDQSAWHLILPYF--TQNYRVVLYDLVCAGSVNPDYFDFNRYTT-------L 72
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE 104
+PY V L +D L + VGHS A++ + + PE
Sbjct: 73 DPY-----VDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPE 112
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 28/112 (25%)
Query: 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSR----VFPFQQPTPDTENKK 57
VL HG + W + +KPL ++ KV A D A G+ R + F+ + +
Sbjct: 8 VLVHGGCLGAWIWYK-LKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFR------DYSE 60
Query: 58 PLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGAL---VAVNSYFEAPERV 106
PL V+A+ I EK +L+GHS G + +A+ +Y PE++
Sbjct: 61 PL------MEVMAS-----IPPDEKVVLLGHSFGGMSLGLAMETY---PEKI 98
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNP 61
VL HG + W + +KPL ++ KV A D A G+ R D +PL
Sbjct: 14 VLVHGGCLGAWIWYK-LKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDY--SEPL-- 68
Query: 62 YSMAFSVLATLYFIDILAAEKAILVGHSAGAL---VAVNSYFEAPERV 106
V+A+ I EK +L+GHS G + +A+ +Y PE++
Sbjct: 69 ----MEVMAS-----IPPDEKVVLLGHSFGGMSLGLAMETY---PEKI 104
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In
Complex With 3a,4,7,7a-Tetrahydro-Benzo [1,3]
Dioxol-2-One
Length = 279
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRV 43
+VL HG+ SW R + L +V+ +DR FG +S+V
Sbjct: 26 VVLIHGYPLDGHSWERQTRELL-AQGYRVITYDRRGFGGSSKV 67
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG 38
++L HGFG + + W++ M LAK + V+A D P G
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKRFT--VIAPDLPGLG 68
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG 38
++L HGFG + + W++ M LAK + V+A D P G
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKRFT--VIAPDLPGLG 68
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 265 KRLHEISCPVLIVTGDTDRIV-PSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSI 323
+ L P+L++ G+ + I P R S +P EVIKN GHV E+
Sbjct: 240 EELRSARVPILLLLGEHEVIYDPHSALHRASSFVPDIEAEVIKNAGHVLSXEQPTYVNER 299
Query: 324 VARFLQ 329
V RF
Sbjct: 300 VXRFFN 305
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG 38
++L HGFG + + W++ M LAK + V+A D P G
Sbjct: 33 VMLVHGFGQTWYEWHQLMPELAKRFT--VIAPDLPGLG 68
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 22/106 (20%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HG+G + W + L+ + ++ D P FG SR F L+
Sbjct: 16 LVLLHGWGLNAEVWRCIDEELSSHFTLHLV--DLPGFG-RSRGF------------GALS 60
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
MA +VL A +KAI +G + G LVA PERV
Sbjct: 61 LADMAEAVLQQ-------APDKAIWLGWALGGLVASQIALTHPERV 99
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 19/108 (17%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HG +W R + LA +V+A D+ F ++ KP +
Sbjct: 49 ILLXHGKNFCAGTWERTIDVLADA-GYRVIAVDQVGF---------------CKSSKPAH 92
Query: 61 PYSMAFSVLA--TLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
Y +F LA T ++ L +A ++GHS G +A P +V
Sbjct: 93 -YQYSFQQLAANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQV 139
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
Query: 238 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIV------PSWNAE 291
+G R V + +AL D P+ L + P L++ G+ D P+
Sbjct: 207 RGKGRESVAWNSALTYD--XIFTQPVVYELDRLQXPTLLLIGEKDNTAIGKDAAPAELKA 264
Query: 292 RL----------SRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 329
RL +R IP +T + GH PQ + E F + LQ
Sbjct: 265 RLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQAPERFHQALLEGLQ 312
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 256 ESKMNPP--LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQ 313
ES + PP L + H+ VL+ G DRIVP + L++ + + V+ CGH Q
Sbjct: 212 ESLVIPPATLGRLPHD----VLVFHGRQDRIVPLDTSLYLTKHLKHAELVVLDRCGHWAQ 267
Query: 314 EEK 316
E+
Sbjct: 268 LER 270
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HG G S SW + +++A D + G T +N + L+
Sbjct: 41 LLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETK-----------VKNPEDLS 89
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNS 98
+MA V + + +L+GHS G +AV++
Sbjct: 90 AETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHT 127
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 263 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLS-RAIPGSTFEVIKNCGH 310
+ L I PVL++ GD D+IVP N+ LS + +P + K H
Sbjct: 208 FTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLLPNGALKTYKGYPH 256
>pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W04|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W05|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
pdb|3W05|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
Length = 266
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
+VL HGFG +W+R + L T +V+ +D G + PD + + +
Sbjct: 20 VVLSHGFGTDQSAWSRVLPYL--TRDHRVVLYDLVCAGSVN---------PDHFDFRRYD 68
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE 104
++ V L +D L + VGHS A++ + + P+
Sbjct: 69 --NLDAYVDDLLAILDALRIPRCAFVGHSVSAMIGILASIRRPD 110
>pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IHA|B Chain B, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IH9|A Chain A, Crystal Structure Of Rice Dwarf14 (d14)
pdb|4IH9|B Chain B, Crystal Structure Of Rice Dwarf14 (d14)
Length = 268
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG-LTSRVFPFQQPTPDTENKKPL 59
+VL HGFG +W+R + L T +V+ +D G + F F++ +N L
Sbjct: 22 VVLSHGFGTDQSAWSRVLPYL--TRDHRVVLYDLVCAGSVNPDHFDFRR----YDN---L 72
Query: 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPE 104
+ Y V L +D L + VGHS A++ + + P+
Sbjct: 73 DAY-----VDDLLAILDALRIPRCAFVGHSVSAMIGILASIRRPD 112
>pdb|4FBM|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBM|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 293
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV--IKNCGHVPQEEKVEEFV 321
L + CP LI+ D +VP N E + I + E+ ++N HV + +E +
Sbjct: 212 LPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELI 268
>pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3E3A|B Chain B, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3HSS|A Chain A, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HSS|B Chain B, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HYS|A Chain A, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HYS|B Chain B, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HZO|A Chain A, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
pdb|3HZO|B Chain B, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
Length = 293
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 262 PLAKRL---HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 318
P RL I+ PVL++ D + P + ++ A+P + I + GH+ E+ E
Sbjct: 219 PQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPE 278
Query: 319 EFVSIVARFL 328
+ + +F
Sbjct: 279 AVNTAMLKFF 288
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 263 LAKRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAIPGSTFEVIKNCGH----VPQEEKV 317
+ L + P L+V GD D++VP + ++ IP + +V + H VP ++
Sbjct: 204 FTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAELKVYEGSSHGIAMVPGDK-- 261
Query: 318 EEFVSIVARFLQR 330
E+F + FL +
Sbjct: 262 EKFNRDLLEFLNK 274
>pdb|4FBL|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|C Chain C, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|D Chain D, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 281
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV--IKNCGHVPQEEKVEEFV 321
L + CP LI+ D +VP N E + I + E+ ++N HV + +E +
Sbjct: 214 LPRVKCPALIIQSREDHVVPPHNGELIYNGIGSTEKELLWLENSYHVATLDNDKELI 270
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G I+P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGFIIPPAEAARLAESLPNCKTVDIGPGLHFLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G I+P A RL+ ++P I H QE+ + S +AR
Sbjct: 226 LHQSPVPKLLFWGTPGFIIPPAEAARLAESLPNCKTVDIGPGLHFLQEDNPDLIGSEIAR 285
Query: 327 FL 328
+L
Sbjct: 286 WL 287
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 263 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRA-IPGSTFEVIKNCGHVPQEEKVEEFV 321
+ L +I P L+V GD D++VP + S A + GST ++ H + ++
Sbjct: 205 FTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALVKGSTLKIYSGAPHGLTDTHKDQLN 264
Query: 322 SIVARFLQ 329
+ + F++
Sbjct: 265 ADLLAFIK 272
>pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G8C|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G9G|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
pdb|4G9G|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
Length = 279
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 324
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDGPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 325 ARFLQ 329
ARF++
Sbjct: 263 ARFIR 267
>pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G5X|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G9E|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
pdb|4G9E|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
Length = 279
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 324
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 325 ARFLQ 329
ARF++
Sbjct: 263 ARFIR 267
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HG G S SW + +++A D + G T +N + L+
Sbjct: 45 LLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETK-----------VKNPEDLS 93
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNS 98
+MA V + + +L+GH+ G +AV++
Sbjct: 94 AETMAKDVGNVVEAMYGDLPPPIMLIGHAMGGAIAVHT 131
>pdb|4G8B|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8B|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8D|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
pdb|4G8D|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
Length = 279
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE----VIKNCGHVPQEEKVEEFVSIV 324
E P+ +V G R P + +S+ G+ +E VI N GH P E EF + +
Sbjct: 206 EAQLPIAVVNG---RDEPFVELDFVSKVKFGNLWEGKTHVIDNAGHAPFREAPAEFDAYL 262
Query: 325 ARFLQ 329
ARF++
Sbjct: 263 ARFIR 267
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++L HG+ + W++ LA + V+A D +G +SR P P +N
Sbjct: 28 LLLLHGYPQTHVMWHKIAPLLANNFT--VVATDLRGYGDSSR--PASVP-------HHIN 76
Query: 61 PYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106
YS + + L E+ +VGH GA VA + P RV
Sbjct: 77 -YSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRV 121
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 269 EISCPVLIVTGDTDRIVPSWN--AERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
+ISCPVL++ G+ I ++ A RAI S + CGH EE EE +
Sbjct: 229 KISCPVLVLWGEKGIIGRKYDVLATWRERAIDVSGQSL--PCGHFLPEEAPEETYQAIYN 286
Query: 327 FLQRA 331
FL
Sbjct: 287 FLTHC 291
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 240 LHQSPVPKLLFWGTPGALIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 299
Query: 327 FL 328
+L
Sbjct: 300 WL 301
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 240 LHQSPVPKLLFWGTPGALIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 299
Query: 327 FL 328
+L
Sbjct: 300 WL 301
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|3LHK|A Chain A, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|B Chain B, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|C Chain C, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii.
pdb|3LHK|D Chain D, Crystal Structure Of Putative Dna Binding Protein From
Methanocaldococcus Jannaschii
Length = 154
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 299 GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 333
G+ +I PQEE VE+ ++IV+ F + +G
Sbjct: 94 GTEIVIINKKHKTPQEELVEDLITIVSHFAGKLYG 128
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++ HGF +SW M LA+ + +A D +G T+ P P+
Sbjct: 34 ILFIHGFPELWYSWRHQMVYLAER-GYRAVAPDLRGYGDTTGA-PLNDPSK--------- 82
Query: 61 PYSMAFSVLATLYFIDILAA--EKAILVGHSAGALVAVNSYFEAPERV 106
+S+ V + ++ +A EK +V H GAL+A + P++V
Sbjct: 83 -FSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKV 129
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 14/108 (12%)
Query: 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLN 60
++ HGF +SW M LA+ + +A D +G T+ P P+
Sbjct: 34 ILFIHGFPELWYSWRHQMVYLAER-GYRAVAPDLRGYGDTTGA-PLNDPSK--------- 82
Query: 61 PYSMAFSVLATLYFIDILAA--EKAILVGHSAGALVAVNSYFEAPERV 106
+S+ V + ++ +A EK +V H GAL+A + P++V
Sbjct: 83 -FSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKV 129
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 226 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 285
Query: 327 FL 328
+L
Sbjct: 286 WL 287
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVAR 326
LH+ P L+ G ++P A RL+ ++P I H QE+ + S +AR
Sbjct: 229 LHQSPVPKLLFWGTPGVLIPPAEAARLAESLPNCKTVDIGPGLHYLQEDNPDLIGSEIAR 288
Query: 327 FL 328
+L
Sbjct: 289 WL 290
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,018,372
Number of Sequences: 62578
Number of extensions: 322284
Number of successful extensions: 918
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 839
Number of HSP's gapped (non-prelim): 131
length of query: 346
length of database: 14,973,337
effective HSP length: 100
effective length of query: 246
effective length of database: 8,715,537
effective search space: 2144022102
effective search space used: 2144022102
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)