Query 019089
Match_columns 346
No_of_seqs 124 out of 1644
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 06:34:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019089.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019089hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 6.4E-34 1.4E-38 253.8 24.5 262 1-330 32-293 (294)
2 KOG4178 Soluble epoxide hydrol 100.0 5.5E-34 1.2E-38 244.3 19.0 271 1-331 47-320 (322)
3 PLN02965 Probable pheophorbida 100.0 9.3E-34 2E-38 247.5 17.5 244 1-331 6-253 (255)
4 PLN02679 hydrolase, alpha/beta 100.0 2.9E-32 6.3E-37 249.1 25.2 261 1-331 91-357 (360)
5 PRK03592 haloalkane dehalogena 100.0 1.5E-32 3.2E-37 245.1 19.2 98 1-115 30-127 (295)
6 TIGR02240 PHA_depoly_arom poly 100.0 3.9E-32 8.6E-37 240.0 20.7 240 1-332 28-267 (276)
7 KOG4409 Predicted hydrolase/ac 100.0 6.2E-32 1.3E-36 232.2 20.6 267 1-330 93-363 (365)
8 PRK00870 haloalkane dehalogena 100.0 2.9E-32 6.2E-37 244.0 19.2 101 1-115 49-149 (302)
9 PRK10349 carboxylesterase BioH 100.0 3.5E-31 7.6E-36 231.4 23.2 239 1-330 16-255 (256)
10 PLN02578 hydrolase 100.0 1.1E-30 2.4E-35 238.4 27.2 264 1-329 89-353 (354)
11 PRK03204 haloalkane dehalogena 100.0 5.4E-31 1.2E-35 233.6 20.5 99 1-115 37-135 (286)
12 PLN03087 BODYGUARD 1 domain co 100.0 3.4E-30 7.5E-35 239.3 24.3 102 1-116 204-309 (481)
13 PLN03084 alpha/beta hydrolase 100.0 3.4E-30 7.3E-35 234.9 23.6 102 1-115 130-231 (383)
14 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.8E-30 6.1E-35 228.8 21.8 246 1-329 33-281 (282)
15 PRK10673 acyl-CoA esterase; Pr 100.0 9.1E-30 2E-34 222.2 23.3 236 1-330 19-254 (255)
16 PF12697 Abhydrolase_6: Alpha/ 100.0 2.6E-29 5.6E-34 213.8 24.8 228 1-323 1-228 (228)
17 KOG1454 Predicted hydrolase/ac 100.0 7.2E-31 1.6E-35 234.2 15.0 260 1-331 61-324 (326)
18 PRK06489 hypothetical protein; 100.0 5.4E-29 1.2E-33 227.9 25.1 107 1-115 72-188 (360)
19 PRK11126 2-succinyl-6-hydroxy- 100.0 2.4E-29 5.2E-34 217.8 20.8 96 1-115 5-101 (242)
20 PRK07581 hypothetical protein; 100.0 8.6E-29 1.9E-33 225.1 25.1 72 262-333 266-338 (339)
21 TIGR03611 RutD pyrimidine util 100.0 5.1E-29 1.1E-33 216.8 22.4 239 1-329 16-256 (257)
22 TIGR03056 bchO_mg_che_rel puta 100.0 3.2E-29 6.9E-34 221.3 19.3 248 1-329 31-278 (278)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.6E-28 5.6E-33 211.1 22.8 236 1-329 16-251 (251)
24 TIGR01738 bioH putative pimelo 100.0 1.5E-28 3.3E-33 211.9 20.4 239 1-328 7-245 (245)
25 PLN02385 hydrolase; alpha/beta 100.0 1.3E-28 2.8E-33 224.6 20.2 242 1-332 90-346 (349)
26 PRK08775 homoserine O-acetyltr 100.0 2.3E-28 5.1E-33 222.3 21.6 97 1-115 60-172 (343)
27 PHA02857 monoglyceride lipase; 100.0 1.8E-27 3.8E-32 210.3 22.0 233 1-331 28-273 (276)
28 PLN02211 methyl indole-3-aceta 100.0 2.1E-27 4.6E-32 208.9 21.8 100 1-115 21-121 (273)
29 PLN02894 hydrolase, alpha/beta 100.0 1.7E-27 3.7E-32 220.1 22.1 104 1-117 108-212 (402)
30 TIGR01250 pro_imino_pep_2 prol 100.0 3.7E-27 8E-32 208.4 23.3 104 1-116 28-131 (288)
31 TIGR01392 homoserO_Ac_trn homo 100.0 1.9E-27 4E-32 217.1 20.4 111 1-115 34-161 (351)
32 PRK00175 metX homoserine O-ace 100.0 1.1E-26 2.4E-31 213.7 21.6 113 1-115 51-181 (379)
33 PRK10749 lysophospholipase L2; 100.0 1.4E-26 3.1E-31 209.4 21.9 105 1-115 57-165 (330)
34 PLN02298 hydrolase, alpha/beta 99.9 2.1E-26 4.6E-31 208.6 20.8 100 1-115 62-168 (330)
35 TIGR03695 menH_SHCHC 2-succiny 99.9 2.6E-26 5.6E-31 198.2 19.3 100 1-115 4-104 (251)
36 PLN02980 2-oxoglutarate decarb 99.9 6.3E-26 1.4E-30 239.3 25.8 263 1-340 1374-1648(1655)
37 PRK14875 acetoin dehydrogenase 99.9 7.3E-26 1.6E-30 208.4 21.0 99 1-116 134-232 (371)
38 PLN02652 hydrolase; alpha/beta 99.9 2.6E-25 5.7E-30 204.1 21.5 242 1-334 139-390 (395)
39 TIGR01249 pro_imino_pep_1 prol 99.9 6.7E-24 1.5E-28 190.1 23.4 102 1-117 30-131 (306)
40 PRK06765 homoserine O-acetyltr 99.9 8.4E-24 1.8E-28 193.4 24.2 291 1-330 59-387 (389)
41 KOG1455 Lysophospholipase [Lip 99.9 2.3E-24 5E-29 182.3 18.0 243 1-331 57-312 (313)
42 KOG2382 Predicted alpha/beta h 99.9 2.7E-24 5.9E-29 184.9 16.2 245 1-331 55-313 (315)
43 PLN02511 hydrolase 99.9 8.3E-24 1.8E-28 194.8 19.6 98 1-114 103-208 (388)
44 PF00561 Abhydrolase_1: alpha/ 99.9 1.3E-22 2.9E-27 173.6 23.0 78 27-115 1-78 (230)
45 PRK05855 short chain dehydroge 99.9 1.9E-23 4.1E-28 203.6 18.1 98 1-113 28-128 (582)
46 KOG2984 Predicted hydrolase [G 99.9 1.2E-22 2.6E-27 160.9 11.9 231 1-331 45-276 (277)
47 COG2267 PldB Lysophospholipase 99.9 2.4E-21 5.2E-26 171.4 18.2 101 1-116 37-142 (298)
48 PRK10985 putative hydrolase; P 99.9 5.9E-21 1.3E-25 172.3 21.0 68 265-332 249-321 (324)
49 TIGR01607 PST-A Plasmodium sub 99.9 9.3E-21 2E-25 171.2 18.3 59 271-329 270-331 (332)
50 COG1647 Esterase/lipase [Gener 99.9 1.1E-20 2.4E-25 152.5 16.6 222 1-329 18-242 (243)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 3E-20 6.6E-25 163.6 19.5 97 1-116 29-134 (274)
52 PRK05077 frsA fermentation/res 99.9 3E-20 6.4E-25 172.1 19.7 212 1-332 197-413 (414)
53 TIGR01838 PHA_synth_I poly(R)- 99.8 1.1E-19 2.5E-24 170.7 18.4 101 1-115 191-301 (532)
54 PRK11071 esterase YqiA; Provis 99.8 2.2E-19 4.7E-24 149.0 16.8 86 1-115 4-92 (190)
55 TIGR01836 PHA_synth_III_C poly 99.8 3.3E-19 7.3E-24 162.6 18.0 102 1-116 65-171 (350)
56 PLN02872 triacylglycerol lipas 99.8 1.5E-18 3.3E-23 158.8 20.4 109 1-117 77-198 (395)
57 PRK13604 luxD acyl transferase 99.8 1.2E-18 2.5E-23 151.8 17.9 100 1-115 40-140 (307)
58 COG0596 MhpC Predicted hydrola 99.8 1.3E-18 2.7E-23 150.6 17.2 99 1-116 24-123 (282)
59 COG2021 MET2 Homoserine acetyl 99.8 1.8E-17 4E-22 144.8 23.3 285 1-330 54-367 (368)
60 KOG2564 Predicted acetyltransf 99.8 3.6E-19 7.7E-24 148.3 11.4 99 1-114 77-180 (343)
61 PRK10566 esterase; Provisional 99.8 3.5E-18 7.6E-23 148.6 16.8 101 1-112 30-138 (249)
62 PRK07868 acyl-CoA synthetase; 99.8 9.7E-18 2.1E-22 171.8 19.8 67 266-332 292-362 (994)
63 PF12695 Abhydrolase_5: Alpha/ 99.8 8.6E-18 1.9E-22 133.5 12.8 90 1-114 2-93 (145)
64 KOG1552 Predicted alpha/beta h 99.7 1.2E-16 2.7E-21 133.0 13.1 189 1-333 63-254 (258)
65 TIGR03101 hydr2_PEP hydrolase, 99.7 1.2E-16 2.5E-21 138.5 9.8 99 1-115 28-133 (266)
66 PRK11460 putative hydrolase; P 99.6 8.6E-15 1.9E-19 125.5 16.2 59 271-329 148-210 (232)
67 PF06342 DUF1057: Alpha/beta h 99.6 2.3E-13 5E-18 115.1 20.7 102 1-119 38-140 (297)
68 PLN02442 S-formylglutathione h 99.6 4E-14 8.8E-19 125.1 16.0 115 1-115 50-177 (283)
69 TIGR02821 fghA_ester_D S-formy 99.6 1.7E-13 3.7E-18 120.8 19.0 113 1-115 45-172 (275)
70 PF00326 Peptidase_S9: Prolyl 99.6 8.1E-14 1.8E-18 118.2 15.9 64 270-333 143-211 (213)
71 TIGR03230 lipo_lipase lipoprot 99.6 7.8E-15 1.7E-19 134.5 10.0 101 1-116 44-154 (442)
72 PLN00021 chlorophyllase 99.6 9.8E-14 2.1E-18 123.5 16.0 95 1-115 55-165 (313)
73 KOG4667 Predicted esterase [Li 99.6 1.9E-13 4.1E-18 110.1 15.0 97 1-114 36-137 (269)
74 KOG4391 Predicted alpha/beta h 99.5 1.4E-13 3E-18 110.9 9.9 199 1-333 81-284 (300)
75 cd00707 Pancreat_lipase_like P 99.5 5.5E-14 1.2E-18 123.4 8.0 101 1-116 39-147 (275)
76 KOG2565 Predicted hydrolases o 99.5 7.2E-13 1.6E-17 115.1 14.5 105 1-119 155-267 (469)
77 COG0429 Predicted hydrolase of 99.5 1.6E-12 3.4E-17 112.4 15.1 67 265-331 268-340 (345)
78 COG3208 GrsT Predicted thioest 99.4 4.5E-12 9.8E-17 105.2 15.3 61 268-329 173-234 (244)
79 PF03096 Ndr: Ndr family; Int 99.4 3.3E-11 7.2E-16 103.3 20.4 245 2-331 27-279 (283)
80 TIGR01840 esterase_phb esteras 99.4 2.2E-12 4.9E-17 109.2 11.9 109 1-115 16-129 (212)
81 KOG1838 Alpha/beta hydrolase [ 99.4 4.2E-11 9E-16 107.3 19.4 68 264-331 315-388 (409)
82 PF02230 Abhydrolase_2: Phosph 99.4 8.2E-12 1.8E-16 106.1 12.9 110 1-115 17-139 (216)
83 PF06821 Ser_hydrolase: Serine 99.4 6.1E-12 1.3E-16 102.0 10.7 49 271-320 114-162 (171)
84 KOG2931 Differentiation-relate 99.4 3.6E-10 7.9E-15 95.7 21.0 102 2-116 50-157 (326)
85 TIGR01839 PHA_synth_II poly(R) 99.3 1.2E-10 2.6E-15 109.2 17.2 96 1-115 218-327 (560)
86 PF10230 DUF2305: Uncharacteri 99.3 7.1E-10 1.5E-14 96.8 21.1 107 1-116 5-122 (266)
87 TIGR03502 lipase_Pla1_cef extr 99.3 8.6E-12 1.9E-16 121.5 9.8 97 1-101 452-575 (792)
88 COG1506 DAP2 Dipeptidyl aminop 99.3 2.4E-11 5.3E-16 118.6 12.0 67 267-333 547-618 (620)
89 PRK10162 acetyl esterase; Prov 99.3 8.1E-10 1.7E-14 99.4 19.9 97 1-115 84-194 (318)
90 PF01738 DLH: Dienelactone hyd 99.2 2.2E-10 4.7E-15 97.5 13.9 100 1-114 17-130 (218)
91 PF00975 Thioesterase: Thioest 99.2 2.4E-09 5.2E-14 91.7 19.7 97 1-115 3-103 (229)
92 PF05728 UPF0227: Uncharacteri 99.2 1.3E-09 2.8E-14 89.4 15.1 87 1-116 2-91 (187)
93 PF05448 AXE1: Acetyl xylan es 99.2 6.4E-09 1.4E-13 93.0 20.0 112 1-115 86-208 (320)
94 PRK10252 entF enterobactin syn 99.1 2.4E-09 5.2E-14 114.1 17.4 96 1-115 1071-1170(1296)
95 TIGR00976 /NonD putative hydro 99.1 1.3E-10 2.8E-15 112.4 6.9 98 1-115 25-131 (550)
96 TIGR01849 PHB_depoly_PhaZ poly 99.1 8.6E-09 1.9E-13 94.0 18.0 97 2-116 106-208 (406)
97 PF06500 DUF1100: Alpha/beta h 99.1 3.6E-09 7.8E-14 95.7 15.1 100 1-116 193-296 (411)
98 COG0400 Predicted esterase [Ge 99.1 3E-09 6.5E-14 88.4 12.7 104 1-115 21-133 (207)
99 PF07819 PGAP1: PGAP1-like pro 99.0 2.1E-09 4.6E-14 91.3 8.7 99 1-117 7-124 (225)
100 PTZ00472 serine carboxypeptida 99.0 5E-08 1.1E-12 91.8 18.6 60 271-330 364-458 (462)
101 PF12146 Hydrolase_4: Putative 98.9 2.7E-09 5.8E-14 74.6 5.0 61 1-76 19-79 (79)
102 COG3458 Acetyl esterase (deace 98.9 6.6E-08 1.4E-12 81.3 13.1 112 1-115 86-209 (321)
103 PF07859 Abhydrolase_3: alpha/ 98.9 1.1E-07 2.3E-12 80.4 14.6 95 1-115 1-109 (211)
104 COG3243 PhaC Poly(3-hydroxyalk 98.8 3E-08 6.6E-13 88.7 11.4 100 1-114 110-215 (445)
105 COG0412 Dienelactone hydrolase 98.8 1.2E-07 2.6E-12 81.3 14.4 105 1-113 30-143 (236)
106 PRK05371 x-prolyl-dipeptidyl a 98.8 2.1E-07 4.7E-12 92.6 18.0 68 265-333 449-521 (767)
107 PF08538 DUF1749: Protein of u 98.8 3.2E-08 7E-13 86.0 10.4 96 1-115 36-147 (303)
108 PF06028 DUF915: Alpha/beta hy 98.8 1.3E-07 2.9E-12 81.3 14.0 112 1-115 14-142 (255)
109 COG2945 Predicted hydrolase of 98.8 2.1E-07 4.6E-12 74.4 13.6 58 270-329 148-205 (210)
110 PLN02733 phosphatidylcholine-s 98.8 1.2E-08 2.6E-13 94.6 7.4 92 9-115 105-200 (440)
111 COG3545 Predicted esterase of 98.7 2.9E-07 6.3E-12 72.8 12.6 60 270-330 116-178 (181)
112 COG3571 Predicted hydrolase of 98.7 9.8E-07 2.1E-11 68.4 14.8 102 1-115 17-123 (213)
113 COG4757 Predicted alpha/beta h 98.7 2.5E-07 5.3E-12 76.1 10.7 65 264-328 209-280 (281)
114 PF12740 Chlorophyllase2: Chlo 98.7 5.9E-08 1.3E-12 82.7 7.4 95 1-115 20-130 (259)
115 KOG2624 Triglyceride lipase-ch 98.7 2.8E-06 6.1E-11 77.6 18.2 112 1-117 76-200 (403)
116 PF03959 FSH1: Serine hydrolas 98.7 1.1E-07 2.5E-12 80.3 8.7 49 269-318 159-208 (212)
117 PF02273 Acyl_transf_2: Acyl t 98.6 7.1E-07 1.5E-11 74.1 11.6 86 1-102 33-122 (294)
118 PRK04940 hypothetical protein; 98.6 5.1E-06 1.1E-10 67.0 15.7 52 273-329 126-178 (180)
119 PRK10115 protease 2; Provision 98.6 1.6E-06 3.6E-11 85.7 15.3 107 1-115 448-558 (686)
120 PF07224 Chlorophyllase: Chlor 98.6 1.7E-07 3.6E-12 78.7 6.6 95 1-115 49-156 (307)
121 PF05990 DUF900: Alpha/beta hy 98.5 2.7E-07 5.9E-12 78.9 7.6 102 1-116 21-137 (233)
122 PF01674 Lipase_2: Lipase (cla 98.5 3.7E-07 8.1E-12 76.7 6.9 83 1-100 4-94 (219)
123 PF08840 BAAT_C: BAAT / Acyl-C 98.4 1.5E-06 3.3E-11 73.4 9.3 48 68-116 6-56 (213)
124 KOG4627 Kynurenine formamidase 98.4 3.4E-06 7.4E-11 68.2 10.4 65 266-330 202-266 (270)
125 PF00151 Lipase: Lipase; Inte 98.4 2.4E-07 5.2E-12 83.2 3.9 96 1-116 74-187 (331)
126 COG3319 Thioesterase domains o 98.4 1.2E-06 2.5E-11 75.4 7.8 97 1-116 3-103 (257)
127 KOG3975 Uncharacterized conser 98.4 7.7E-05 1.7E-09 62.4 17.4 110 1-116 32-147 (301)
128 smart00824 PKS_TE Thioesterase 98.3 2.5E-06 5.3E-11 71.5 8.9 95 2-115 1-101 (212)
129 PF09752 DUF2048: Uncharacteri 98.3 8.3E-06 1.8E-10 72.2 12.2 56 273-329 291-347 (348)
130 COG4188 Predicted dienelactone 98.3 7.4E-07 1.6E-11 79.0 5.1 55 266-320 246-303 (365)
131 PF10503 Esterase_phd: Esteras 98.3 2.4E-06 5.1E-11 72.0 7.8 108 1-115 19-131 (220)
132 COG0657 Aes Esterase/lipase [L 98.2 3E-05 6.4E-10 69.7 14.0 97 1-115 82-190 (312)
133 KOG1515 Arylacetamide deacetyl 98.2 3.3E-05 7.1E-10 69.2 13.6 97 1-115 93-206 (336)
134 KOG3043 Predicted hydrolase re 98.1 2.4E-05 5.2E-10 64.4 9.8 62 269-330 162-239 (242)
135 KOG2100 Dipeptidyl aminopeptid 98.1 3E-05 6.5E-10 77.3 11.6 68 269-336 679-752 (755)
136 PF05057 DUF676: Putative seri 98.1 4.9E-06 1.1E-10 70.5 5.2 23 1-23 7-29 (217)
137 PF12715 Abhydrolase_7: Abhydr 98.1 2.2E-05 4.8E-10 70.3 9.4 101 1-113 118-257 (390)
138 PF03583 LIP: Secretory lipase 98.1 0.00044 9.5E-09 61.3 17.4 60 270-332 218-282 (290)
139 PF08386 Abhydrolase_4: TAP-li 98.0 1.8E-05 3.9E-10 58.5 6.6 60 271-330 34-93 (103)
140 COG1075 LipA Predicted acetylt 98.0 8.2E-06 1.8E-10 73.8 5.5 97 1-116 62-164 (336)
141 PF03403 PAF-AH_p_II: Platelet 98.0 2.2E-05 4.8E-10 72.1 8.1 115 1-117 103-263 (379)
142 KOG2112 Lysophospholipase [Lip 98.0 0.00015 3.2E-09 59.4 11.8 107 1-113 6-125 (206)
143 PF02129 Peptidase_S15: X-Pro 98.0 2.5E-05 5.4E-10 68.8 7.6 97 1-114 23-134 (272)
144 PF06057 VirJ: Bacterial virul 98.0 0.0002 4.3E-09 58.2 12.0 96 2-115 6-106 (192)
145 PF05677 DUF818: Chlamydia CHL 97.8 6.1E-05 1.3E-09 66.2 7.5 86 1-101 140-235 (365)
146 PF00756 Esterase: Putative es 97.8 7.8E-05 1.7E-09 64.7 7.1 50 66-115 97-149 (251)
147 COG4814 Uncharacterized protei 97.8 9.7E-05 2.1E-09 62.0 7.1 110 1-115 48-175 (288)
148 PF02450 LCAT: Lecithin:choles 97.7 0.00013 2.8E-09 67.5 7.4 80 13-116 66-160 (389)
149 PF04301 DUF452: Protein of un 97.7 0.0016 3.6E-08 54.3 13.0 37 275-314 169-205 (213)
150 COG4782 Uncharacterized protei 97.6 0.00025 5.4E-09 62.8 8.4 103 1-115 119-233 (377)
151 PF11339 DUF3141: Protein of u 97.6 0.0053 1.1E-07 57.2 15.9 53 63-115 117-174 (581)
152 KOG3253 Predicted alpha/beta h 97.5 0.00061 1.3E-08 63.9 9.9 62 269-330 302-373 (784)
153 KOG3724 Negative regulator of 97.5 0.00032 6.9E-09 67.7 7.6 35 82-116 183-220 (973)
154 PF12048 DUF3530: Protein of u 97.5 0.013 2.9E-07 52.4 17.6 44 71-114 183-227 (310)
155 PRK10439 enterobactin/ferric e 97.5 0.00055 1.2E-08 63.7 8.8 50 66-115 268-322 (411)
156 PF10142 PhoPQ_related: PhoPQ- 97.4 0.0026 5.7E-08 57.7 12.1 62 268-332 259-321 (367)
157 KOG2551 Phospholipase/carboxyh 97.3 0.00073 1.6E-08 55.8 6.9 62 268-332 160-221 (230)
158 COG4099 Predicted peptidase [G 97.3 0.00087 1.9E-08 57.7 7.4 41 74-114 260-302 (387)
159 COG3509 LpqC Poly(3-hydroxybut 97.3 0.0015 3.3E-08 56.4 8.8 106 1-115 64-178 (312)
160 KOG1553 Predicted alpha/beta h 97.2 0.00075 1.6E-08 59.2 6.0 74 25-114 267-343 (517)
161 COG3150 Predicted esterase [Ge 97.2 0.00094 2E-08 52.6 5.7 79 1-102 2-80 (191)
162 PF05577 Peptidase_S28: Serine 97.1 0.0013 2.8E-08 62.0 7.5 92 17-116 50-148 (434)
163 cd00741 Lipase Lipase. Lipase 97.1 0.00089 1.9E-08 53.4 5.5 36 79-114 26-65 (153)
164 KOG1551 Uncharacterized conser 97.1 0.0081 1.8E-07 51.0 11.1 57 274-331 309-366 (371)
165 cd00312 Esterase_lipase Estera 97.1 0.0023 5E-08 61.4 9.3 102 1-117 98-214 (493)
166 COG0627 Predicted esterase [Ge 97.0 0.0018 3.8E-08 57.8 6.8 55 62-116 127-187 (316)
167 PLN02517 phosphatidylcholine-s 97.0 0.0031 6.6E-08 59.9 8.3 84 12-116 156-263 (642)
168 PF01764 Lipase_3: Lipase (cla 96.9 0.0018 4E-08 50.5 5.3 34 70-103 53-86 (140)
169 KOG4840 Predicted hydrolases o 96.8 0.0065 1.4E-07 50.2 7.4 96 1-115 39-143 (299)
170 KOG3847 Phospholipase A2 (plat 96.8 0.0009 2E-08 58.0 2.6 117 1-119 121-278 (399)
171 PF11187 DUF2974: Protein of u 96.6 0.0034 7.4E-08 53.3 4.7 39 81-119 84-126 (224)
172 KOG2281 Dipeptidyl aminopeptid 96.5 0.0025 5.4E-08 60.4 3.8 83 25-114 675-760 (867)
173 KOG2369 Lecithin:cholesterol a 96.5 0.0063 1.4E-07 56.0 6.2 48 68-115 165-224 (473)
174 cd00519 Lipase_3 Lipase (class 96.5 0.0039 8.5E-08 53.3 4.7 25 79-103 126-150 (229)
175 COG2819 Predicted hydrolase of 96.5 0.0037 8E-08 53.5 4.3 46 70-115 123-171 (264)
176 PLN02606 palmitoyl-protein thi 96.3 0.014 3E-07 51.2 7.1 94 1-115 29-131 (306)
177 KOG2541 Palmitoyl protein thio 96.2 0.027 5.9E-07 48.0 8.2 95 1-115 26-127 (296)
178 KOG2183 Prolylcarboxypeptidase 95.8 0.049 1.1E-06 49.4 8.2 82 28-115 113-201 (492)
179 KOG3101 Esterase D [General fu 95.8 0.0065 1.4E-07 49.8 2.3 113 1-115 47-175 (283)
180 COG1073 Hydrolases of the alph 95.7 0.029 6.3E-07 49.3 6.7 66 267-332 227-298 (299)
181 PF06259 Abhydrolase_8: Alpha/ 95.7 0.024 5.3E-07 46.0 5.3 50 68-117 91-145 (177)
182 PLN02454 triacylglycerol lipas 95.6 0.017 3.8E-07 52.9 4.8 31 71-101 216-248 (414)
183 PLN02633 palmitoyl protein thi 95.5 0.066 1.4E-06 47.1 7.5 35 81-115 94-130 (314)
184 PLN02162 triacylglycerol lipas 95.4 0.025 5.5E-07 52.4 5.0 30 71-100 268-297 (475)
185 PF10340 DUF2424: Protein of u 95.3 0.088 1.9E-06 47.9 7.9 102 1-116 125-235 (374)
186 PF00450 Peptidase_S10: Serine 95.2 0.042 9E-07 51.4 5.9 59 271-329 330-414 (415)
187 PLN02571 triacylglycerol lipas 95.1 0.03 6.5E-07 51.5 4.6 33 69-101 212-246 (413)
188 COG2272 PnbA Carboxylesterase 95.1 0.099 2.1E-06 48.8 7.9 109 1-115 97-216 (491)
189 COG2936 Predicted acyl esteras 94.9 0.045 9.8E-07 52.2 5.1 76 25-114 79-157 (563)
190 PLN00413 triacylglycerol lipas 94.8 0.045 9.8E-07 50.9 5.0 32 69-100 272-303 (479)
191 PLN02408 phospholipase A1 94.5 0.056 1.2E-06 49.0 4.6 34 70-103 187-222 (365)
192 PF00135 COesterase: Carboxyle 94.5 0.11 2.3E-06 50.4 6.9 106 1-119 128-248 (535)
193 PF05705 DUF829: Eukaryotic pr 94.4 0.05 1.1E-06 46.8 4.1 60 269-328 176-240 (240)
194 PF07082 DUF1350: Protein of u 94.4 0.2 4.4E-06 42.6 7.4 32 82-113 91-122 (250)
195 PLN02213 sinapoylglucose-malat 94.3 0.14 3E-06 46.2 6.8 59 271-330 233-316 (319)
196 PLN02934 triacylglycerol lipas 94.3 0.061 1.3E-06 50.5 4.5 33 68-100 308-340 (515)
197 PF02089 Palm_thioest: Palmito 94.1 0.046 1E-06 47.6 3.1 99 1-115 8-115 (279)
198 KOG2182 Hydrolytic enzymes of 94.1 0.29 6.3E-06 45.7 8.3 107 2-116 90-207 (514)
199 PLN02324 triacylglycerol lipas 93.7 0.096 2.1E-06 48.2 4.6 31 71-101 203-235 (415)
200 PLN02310 triacylglycerol lipas 93.6 0.1 2.2E-06 47.9 4.6 31 71-101 195-229 (405)
201 PLN02802 triacylglycerol lipas 93.5 0.1 2.2E-06 49.0 4.5 32 71-102 318-351 (509)
202 KOG3967 Uncharacterized conser 93.5 0.059 1.3E-06 44.4 2.6 42 75-116 184-227 (297)
203 PLN02753 triacylglycerol lipas 93.5 0.11 2.4E-06 49.0 4.6 31 71-101 297-332 (531)
204 PF05277 DUF726: Protein of un 93.3 0.13 2.8E-06 46.5 4.6 38 79-116 218-260 (345)
205 PF01083 Cutinase: Cutinase; 93.0 0.25 5.5E-06 40.4 5.6 51 66-116 62-122 (179)
206 PLN02209 serine carboxypeptida 92.9 0.33 7.2E-06 45.6 6.9 59 271-330 351-434 (437)
207 PLN02719 triacylglycerol lipas 92.7 0.16 3.6E-06 47.7 4.5 20 82-101 299-318 (518)
208 PLN03037 lipase class 3 family 92.6 0.17 3.8E-06 47.7 4.6 32 70-101 303-338 (525)
209 COG2382 Fes Enterochelin ester 92.5 0.073 1.6E-06 46.4 1.9 35 81-115 177-211 (299)
210 PLN02761 lipase class 3 family 92.3 0.2 4.3E-06 47.3 4.6 30 71-100 278-313 (527)
211 PLN03016 sinapoylglucose-malat 92.2 0.47 1E-05 44.6 7.0 59 271-330 347-430 (433)
212 PLN02847 triacylglycerol lipas 91.9 0.17 3.7E-06 48.4 3.6 23 79-101 249-271 (633)
213 PF11144 DUF2920: Protein of u 91.8 0.23 5E-06 45.4 4.2 62 272-333 294-370 (403)
214 KOG4372 Predicted alpha/beta h 90.8 0.2 4.3E-06 45.6 2.8 81 1-96 83-165 (405)
215 KOG1282 Serine carboxypeptidas 90.6 0.59 1.3E-05 43.9 5.8 61 271-331 363-448 (454)
216 PF06850 PHB_depo_C: PHB de-po 90.0 0.66 1.4E-05 38.0 4.9 60 271-330 134-201 (202)
217 COG3946 VirJ Type IV secretory 89.7 1.5 3.2E-05 40.1 7.3 91 2-113 264-362 (456)
218 PF11288 DUF3089: Protein of u 89.7 0.76 1.6E-05 38.3 5.2 35 68-102 81-116 (207)
219 KOG4569 Predicted lipase [Lipi 88.6 0.65 1.4E-05 42.2 4.4 33 69-101 159-191 (336)
220 PF00450 Peptidase_S10: Serine 88.2 1.3 2.9E-05 41.3 6.5 102 1-115 43-180 (415)
221 KOG2237 Predicted serine prote 85.8 0.98 2.1E-05 43.6 4.0 37 79-115 547-583 (712)
222 COG4947 Uncharacterized protei 85.7 0.68 1.5E-05 37.0 2.4 43 73-115 93-135 (227)
223 KOG1516 Carboxylesterase and r 85.5 3.3 7.2E-05 40.3 7.7 61 61-121 170-237 (545)
224 PLN02213 sinapoylglucose-malat 83.4 4.5 9.8E-05 36.4 7.1 64 28-100 3-70 (319)
225 COG5153 CVT17 Putative lipase 83.3 1.6 3.6E-05 37.8 3.9 24 79-102 274-297 (425)
226 KOG4540 Putative lipase essent 83.3 1.6 3.6E-05 37.8 3.9 24 79-102 274-297 (425)
227 KOG2029 Uncharacterized conser 82.7 2.2 4.9E-05 40.9 4.9 36 80-115 525-571 (697)
228 COG1770 PtrB Protease II [Amin 82.7 2.1 4.6E-05 41.6 4.8 36 80-115 526-561 (682)
229 PF07519 Tannase: Tannase and 81.9 2.1 4.6E-05 40.8 4.6 48 69-116 100-150 (474)
230 PF08237 PE-PPE: PE-PPE domain 78.8 9.8 0.00021 32.3 7.2 24 79-102 46-69 (225)
231 COG4287 PqaA PhoPQ-activated p 78.2 3.3 7.3E-05 37.4 4.2 61 268-331 326-387 (507)
232 PLN02209 serine carboxypeptida 72.0 10 0.00022 35.9 6.0 74 28-114 119-210 (437)
233 PLN03016 sinapoylglucose-malat 71.8 9.5 0.00021 36.0 5.8 75 27-115 116-209 (433)
234 KOG2551 Phospholipase/carboxyh 71.5 16 0.00035 30.7 6.3 33 1-35 8-44 (230)
235 PF00698 Acyl_transf_1: Acyl t 71.1 4.2 9.1E-05 36.5 3.3 29 71-99 74-102 (318)
236 COG4822 CbiK Cobalamin biosynt 71.1 15 0.00032 30.7 5.9 58 1-86 141-199 (265)
237 COG2939 Carboxypeptidase C (ca 69.3 14 0.00031 35.0 6.2 105 1-116 104-236 (498)
238 smart00827 PKS_AT Acyl transfe 66.7 7 0.00015 34.6 3.7 29 71-99 72-100 (298)
239 PRK10279 hypothetical protein; 66.7 7.8 0.00017 34.5 3.9 39 71-109 23-61 (300)
240 PF07519 Tannase: Tannase and 66.0 8.9 0.00019 36.6 4.4 61 271-331 353-427 (474)
241 TIGR03131 malonate_mdcH malona 62.7 9.3 0.0002 33.8 3.7 29 71-99 66-94 (295)
242 TIGR00128 fabD malonyl CoA-acy 62.0 9.3 0.0002 33.6 3.6 30 71-100 72-102 (290)
243 COG4553 DepA Poly-beta-hydroxy 60.0 1.3E+02 0.0027 26.8 12.8 56 60-116 149-209 (415)
244 cd01714 ETF_beta The electron 58.6 48 0.001 27.6 7.1 41 61-102 90-134 (202)
245 cd07198 Patatin Patatin-like p 57.6 15 0.00033 29.5 3.9 33 71-103 16-48 (172)
246 COG3933 Transcriptional antite 57.4 35 0.00076 31.9 6.3 71 1-98 112-182 (470)
247 PF02129 Peptidase_S15: X-Pro 56.8 18 0.00039 31.5 4.5 45 266-311 223-271 (272)
248 cd07225 Pat_PNPLA6_PNPLA7 Pata 56.4 14 0.00031 33.0 3.7 32 71-102 33-64 (306)
249 cd07207 Pat_ExoU_VipD_like Exo 56.1 16 0.00034 30.0 3.8 31 72-102 18-48 (194)
250 KOG1202 Animal-type fatty acid 55.6 35 0.00075 36.3 6.5 42 73-114 2170-2217(2376)
251 PF05576 Peptidase_S37: PS-10 54.4 21 0.00046 33.1 4.4 96 2-112 67-165 (448)
252 cd07230 Pat_TGL4-5_like Triacy 52.7 18 0.00039 34.0 3.9 39 73-111 93-131 (421)
253 KOG1283 Serine carboxypeptidas 51.1 42 0.0009 30.1 5.5 65 28-106 73-147 (414)
254 cd08769 DAP_dppA_2 Peptidase M 50.4 69 0.0015 28.1 6.8 59 268-332 144-204 (270)
255 KOG2385 Uncharacterized conser 50.1 14 0.00031 35.0 2.7 39 78-116 444-487 (633)
256 cd07231 Pat_SDP1-like Sugar-De 49.2 24 0.00053 31.6 3.9 38 73-110 88-125 (323)
257 cd07210 Pat_hypo_W_succinogene 48.8 25 0.00054 29.7 3.9 30 73-102 20-49 (221)
258 cd07229 Pat_TGL3_like Triacylg 48.2 24 0.00053 32.6 3.9 41 71-111 101-141 (391)
259 COG1752 RssA Predicted esteras 47.2 23 0.0005 31.6 3.6 32 71-102 29-60 (306)
260 cd07227 Pat_Fungal_NTE1 Fungal 47.0 26 0.00056 30.7 3.8 32 71-102 28-59 (269)
261 cd07232 Pat_PLPL Patain-like p 46.8 26 0.00056 32.8 3.9 37 74-110 88-124 (407)
262 cd07209 Pat_hypo_Ecoli_Z1214_l 46.0 32 0.0007 28.9 4.1 31 73-103 18-48 (215)
263 PF13709 DUF4159: Domain of un 45.4 71 0.0015 26.7 6.0 60 271-336 53-113 (207)
264 TIGR02816 pfaB_fam PfaB family 45.4 23 0.00049 34.4 3.4 29 72-100 255-284 (538)
265 PF09949 DUF2183: Uncharacteri 45.0 88 0.0019 22.7 5.7 82 16-111 14-97 (100)
266 COG2939 Carboxypeptidase C (ca 44.2 26 0.00057 33.3 3.5 30 301-330 461-490 (498)
267 cd07228 Pat_NTE_like_bacteria 42.2 39 0.00085 27.2 4.0 31 73-103 20-50 (175)
268 PF10503 Esterase_phd: Esteras 41.0 29 0.00063 29.4 3.1 26 272-297 170-195 (220)
269 cd07222 Pat_PNPLA4 Patatin-lik 40.2 43 0.00093 28.9 4.1 25 84-109 34-58 (246)
270 COG1505 Serine proteases of th 39.6 1E+02 0.0022 30.3 6.6 61 272-332 581-647 (648)
271 KOG1282 Serine carboxypeptidas 38.7 73 0.0016 30.3 5.6 65 28-100 119-187 (454)
272 cd07212 Pat_PNPLA9 Patatin-lik 36.2 54 0.0012 29.4 4.2 20 83-102 33-53 (312)
273 PRK11613 folP dihydropteroate 34.3 1.8E+02 0.0039 25.7 7.0 16 80-95 210-225 (282)
274 PF10605 3HBOH: 3HB-oligomer h 34.2 39 0.00084 33.0 3.0 43 271-313 555-605 (690)
275 cd07205 Pat_PNPLA6_PNPLA7_NTE1 34.2 63 0.0014 25.9 4.0 30 73-102 20-49 (175)
276 PF10081 Abhydrolase_9: Alpha/ 33.4 55 0.0012 28.8 3.6 38 82-119 110-150 (289)
277 COG1073 Hydrolases of the alph 32.8 97 0.0021 26.6 5.3 102 1-104 52-155 (299)
278 cd07224 Pat_like Patatin-like 31.9 64 0.0014 27.5 3.8 32 72-103 18-51 (233)
279 KOG4388 Hormone-sensitive lipa 31.3 1.1E+02 0.0024 30.0 5.4 39 272-310 788-828 (880)
280 cd07204 Pat_PNPLA_like Patatin 31.2 63 0.0014 27.8 3.7 24 84-107 34-58 (243)
281 cd07208 Pat_hypo_Ecoli_yjju_li 31.0 66 0.0014 27.9 3.8 32 74-105 19-51 (266)
282 PF11713 Peptidase_C80: Peptid 30.5 46 0.001 26.5 2.5 35 59-93 74-116 (157)
283 cd07218 Pat_iPLA2 Calcium-inde 30.3 68 0.0015 27.6 3.7 25 84-108 33-58 (245)
284 PF05576 Peptidase_S37: PS-10 29.5 42 0.00091 31.2 2.3 60 267-328 347-411 (448)
285 PF14253 AbiH: Bacteriophage a 28.8 29 0.00062 30.2 1.2 15 79-93 233-247 (270)
286 COG0331 FabD (acyl-carrier-pro 28.4 84 0.0018 28.2 4.0 22 79-100 83-104 (310)
287 COG1448 TyrB Aspartate/tyrosin 28.0 2E+02 0.0042 26.6 6.2 83 1-114 174-263 (396)
288 PRK12467 peptide synthase; Pro 26.3 2.3E+02 0.005 35.4 8.2 94 1-113 3695-3792(3956)
289 smart00824 PKS_TE Thioesterase 26.0 59 0.0013 26.2 2.6 58 269-327 151-211 (212)
290 cd07206 Pat_TGL3-4-5_SDP1 Tria 26.0 96 0.0021 27.6 3.9 30 77-106 93-122 (298)
291 KOG2521 Uncharacterized conser 25.8 1.4E+02 0.003 27.3 4.9 63 271-333 225-292 (350)
292 COG4099 Predicted peptidase [G 25.7 37 0.00081 30.1 1.3 28 271-298 315-342 (387)
293 COG2230 Cfa Cyclopropane fatty 25.5 92 0.002 27.5 3.7 41 71-112 61-104 (283)
294 cd08770 DAP_dppA_3 Peptidase M 25.4 3E+02 0.0064 24.1 6.7 59 268-332 144-203 (263)
295 cd07221 Pat_PNPLA3 Patatin-lik 25.0 97 0.0021 26.8 3.7 28 83-110 34-62 (252)
296 COG4029 Uncharacterized protei 25.0 3.1E+02 0.0067 20.8 6.1 58 271-331 4-61 (142)
297 PF12641 Flavodoxin_3: Flavodo 24.9 3E+02 0.0065 21.9 6.3 59 272-330 40-98 (160)
298 COG3621 Patatin [General funct 24.5 1.2E+02 0.0026 27.4 4.1 33 71-103 27-64 (394)
299 PF11144 DUF2920: Protein of u 22.5 87 0.0019 29.1 3.0 36 82-117 185-220 (403)
300 COG0218 Predicted GTPase [Gene 22.3 52 0.0011 27.3 1.4 19 270-288 134-152 (200)
301 cd08663 DAP_dppA_1 Peptidase M 22.0 4E+02 0.0086 23.4 6.8 59 268-332 144-204 (266)
302 cd07211 Pat_PNPLA8 Patatin-lik 22.0 1E+02 0.0022 27.5 3.4 16 85-100 45-60 (308)
303 cd00281 DAP_dppA Peptidase M55 21.8 4E+02 0.0086 23.3 6.8 59 268-332 143-203 (265)
304 PF03610 EIIA-man: PTS system 21.7 3.3E+02 0.0072 20.0 6.1 76 1-102 3-78 (116)
305 PF00004 AAA: ATPase family as 21.0 1.5E+02 0.0032 21.9 3.8 35 2-38 1-35 (132)
306 PF10686 DUF2493: Protein of u 20.6 1.5E+02 0.0033 19.9 3.2 35 1-38 34-71 (71)
307 COG2830 Uncharacterized protei 20.5 68 0.0015 25.7 1.7 34 276-312 169-202 (214)
308 PRK14194 bifunctional 5,10-met 20.4 1.5E+02 0.0032 26.5 4.0 34 68-101 143-182 (301)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.4e-34 Score=253.78 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=162.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|++ .|+||++|+||||.|+.+... .......|+++..+.++.++++++++
T Consensus 32 vlllHG~~~~~~~w~~~~~~L~~--~~~vi~~DlpG~G~S~~~~~~--------~~~~~~~~~~~~~a~~l~~~l~~l~~ 101 (294)
T PLN02824 32 LVLVHGFGGNADHWRKNTPVLAK--SHRVYAIDLLGYGYSDKPNPR--------SAPPNSFYTFETWGEQLNDFCSDVVG 101 (294)
T ss_pred EEEECCCCCChhHHHHHHHHHHh--CCeEEEEcCCCCCCCCCCccc--------cccccccCCHHHHHHHHHHHHHHhcC
Confidence 69999999999999999999986 379999999999999754211 00112358999999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++||||||||++++.+|+++|++|+++|++++...... ... ......+... .+..
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~-~~~-------------------~~~~~~~~~~---~~~~ 158 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLH-IKK-------------------QPWLGRPFIK---AFQN 158 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccc-ccc-------------------cchhhhHHHH---HHHH
Confidence 9999999999999999999999999999999987431100 000 0000000000 0000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
. +.... .. ...+.... . ....+... ...+..+..+.+.....+..+...++.
T Consensus 159 ~---~~~~~------~~---~~~~~~~~-----~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (294)
T PLN02824 159 L---LRETA------VG---KAFFKSVA-----T---PETVKNIL--------CQCYHDDSAVTDELVEAILRPGLEPGA 210 (294)
T ss_pred H---Hhchh------HH---HHHHHhhc-----C---HHHHHHHH--------HHhccChhhccHHHHHHHHhccCCchH
Confidence 0 00000 00 00000000 0 00000000 000111111111111222111111111
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
...+.+. ... .........+.++++|+|+|+|++|.+++.+.++.+.+..|++++++++++||++++|+|++|
T Consensus 211 ~~~~~~~----~~~---~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~ 283 (294)
T PLN02824 211 VDVFLDF----ISY---SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELV 283 (294)
T ss_pred HHHHHHH----hcc---ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHH
Confidence 1111111 100 001122345788999999999999999999999999888888999999999999999999999
Q ss_pred HHHHHHHHHH
Q 019089 321 VSIVARFLQR 330 (346)
Q Consensus 321 ~~~i~~fl~~ 330 (346)
++.|.+|+++
T Consensus 284 ~~~i~~fl~~ 293 (294)
T PLN02824 284 NPLIESFVAR 293 (294)
T ss_pred HHHHHHHHhc
Confidence 9999999975
No 2
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=5.5e-34 Score=244.28 Aligned_cols=271 Identities=25% Similarity=0.355 Sum_probs=165.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|+|+|||+.+++.|+.+.+.|+. .||||+|+|+||||.|+.|+. ...|++...+.++..++++++.
T Consensus 47 illlHGfPe~wyswr~q~~~la~-~~~rviA~DlrGyG~Sd~P~~-------------~~~Yt~~~l~~di~~lld~Lg~ 112 (322)
T KOG4178|consen 47 VLLLHGFPESWYSWRHQIPGLAS-RGYRVIAPDLRGYGFSDAPPH-------------ISEYTIDELVGDIVALLDHLGL 112 (322)
T ss_pred EEEEccCCccchhhhhhhhhhhh-cceEEEecCCCCCCCCCCCCC-------------cceeeHHHHHHHHHHHHHHhcc
Confidence 68999999999999999999987 469999999999999987642 3579999999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++++|||||+++|+.+|+.+|++|+++|.++.+...|............+.. ..+ ...+
T Consensus 113 ~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~--------~y~-----------~~fQ 173 (322)
T KOG4178|consen 113 KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKS--------YYI-----------CLFQ 173 (322)
T ss_pred ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCcc--------cee-----------Eecc
Confidence 999999999999999999999999999999998655433221111010001000 000 0000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhh-hhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccc
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLR-SAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG 239 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
... ..+. .+.....+.+....+ ..... ....+... .....|. +++.++.+...+...+
T Consensus 174 ~~~-~~E~----------~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~w~-----t~edi~~~~~~f~~~g 232 (322)
T KOG4178|consen 174 EPG-KPET----------ELSKDDTEMLVKTFRTRKTPG---PLIVPKQP--NENPLWL-----TEEDIAFYVSKFQIDG 232 (322)
T ss_pred ccC-cchh----------hhccchhHHhHHhhhccccCC---ccccCCCC--CCccchh-----hHHHHHHHHhcccccc
Confidence 000 0000 000000000000000 00000 00000000 0000111 2222222222221111
Q ss_pred hhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChH-HHHHHHHhCCCC-eEEEecCCCCCCchhCH
Q 019089 240 WDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSW-NAERLSRAIPGS-TFEVIKNCGHVPQEEKV 317 (346)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~p~~-~~~~i~~~GH~~~~e~p 317 (346)
+...+ ++.+++... + . .....+.++++|+++|||+.|.+.+.. +...+.+.+|+. +.++++|+||+++.|+|
T Consensus 233 ~~gpl-Nyyrn~~r~--w--~-a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p 306 (322)
T KOG4178|consen 233 FTGPL-NYYRNFRRN--W--E-AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKP 306 (322)
T ss_pred ccccc-hhhHHHhhC--c--h-hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCH
Confidence 11111 111111110 0 0 123467899999999999999988765 677788889987 67889999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 019089 318 EEFVSIVARFLQRA 331 (346)
Q Consensus 318 e~~~~~i~~fl~~~ 331 (346)
++|++++.+|+++-
T Consensus 307 ~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 307 QEVNQAILGFINSF 320 (322)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 3
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=9.3e-34 Score=247.49 Aligned_cols=244 Identities=17% Similarity=0.191 Sum_probs=155.8
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++.+++.|+.+++.|.+ .+|+|+++|+||||.|+.+. ...|+++..+.++.++++.++.
T Consensus 6 vvllHG~~~~~~~w~~~~~~L~~-~~~~via~Dl~G~G~S~~~~--------------~~~~~~~~~a~dl~~~l~~l~~ 70 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLATLLDA-AGFKSTCVDLTGAGISLTDS--------------NTVSSSDQYNRPLFALLSDLPP 70 (255)
T ss_pred EEEECCCCCCcCcHHHHHHHHhh-CCceEEEecCCcCCCCCCCc--------------cccCCHHHHHHHHHHHHHhcCC
Confidence 69999999999999999999964 46999999999999996421 1257888899999999999987
Q ss_pred -cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCcccccccccccccc-chhhHHHHHH
Q 019089 81 -EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLL-KPFLKVYTIL 158 (346)
Q Consensus 81 -~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 158 (346)
++++||||||||++++.+|.++|++|+++|++++....+.........+...... ........... .+... ..
T Consensus 71 ~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~ 145 (255)
T PLN02965 71 DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTE--KIWDYTFGEGPDKPPTG---IM 145 (255)
T ss_pred CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccc--cceeeeeccCCCCCcch---hh
Confidence 4999999999999999999999999999999987533221100000000000000 00000000000 00000 00
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCCh--HhHHHHHHHhcCccc
Q 019089 159 SMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSK--EVAEHVIEGYTKPLR 236 (346)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 236 (346)
... ... ...++... ....... ....+.
T Consensus 146 -----------------~~~---~~~-----------------------------~~~~~~~~~~~~~~~~~-~~~~~~- 174 (255)
T PLN02965 146 -----------------MKP---EFV-----------------------------RHYYYNQSPLEDYTLSS-KLLRPA- 174 (255)
T ss_pred -----------------cCH---HHH-----------------------------HHHHhcCCCHHHHHHHH-HhcCCC-
Confidence 000 000 00000000 0000000 000000
Q ss_pred ccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhC
Q 019089 237 VKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 316 (346)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~ 316 (346)
.+ +.+.. ..+....+.++++|+++|+|++|.++|++.++.+++.+|+++++++++|||++++|+
T Consensus 175 --~~-~~~~~-------------~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~ 238 (255)
T PLN02965 175 --PV-RAFQD-------------LDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSV 238 (255)
T ss_pred --CC-cchhh-------------hhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcC
Confidence 00 00000 001112445689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 019089 317 VEEFVSIVARFLQRA 331 (346)
Q Consensus 317 pe~~~~~i~~fl~~~ 331 (346)
|++|++.|.+|++..
T Consensus 239 p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 239 PTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.9e-32 Score=249.12 Aligned_cols=261 Identities=26% Similarity=0.395 Sum_probs=157.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|+++++.|.+ +|+||++|+||||.|+.+. ...|++...+.++.++++.+++
T Consensus 91 lvllHG~~~~~~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~--------------~~~~~~~~~a~~l~~~l~~l~~ 154 (360)
T PLN02679 91 VLLVHGFGASIPHWRRNIGVLAK--NYTVYAIDLLGFGASDKPP--------------GFSYTMETWAELILDFLEEVVQ 154 (360)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCC--------------CccccHHHHHHHHHHHHHHhcC
Confidence 69999999999999999998875 5899999999999996421 1258888999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHh-hchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYF-EAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILS 159 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~-~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (346)
++++||||||||++++.+|. .+|++|+++|++++....+... . . . .... ....+.....
T Consensus 155 ~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~--~-----~------~--~~~~-~~~~~~~~~~---- 214 (360)
T PLN02679 155 KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKA--V-----V------D--DWRI-KLLLPLLWLI---- 214 (360)
T ss_pred CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccccccc--c-----c------c--hHHH-hhhcchHHHH----
Confidence 99999999999999998887 4799999999998753211000 0 0 0 0000 0000000000
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccc
Q 019089 160 MFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG 239 (346)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
.++... .......+..... + ..+.+.+ ...+.....+.+...+.+..+....+
T Consensus 215 ---~~~~~~--------~~~~~~~~~~~~~---~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T PLN02679 215 ---DFLLKQ--------RGIASALFNRVKQ---R----DNLKNIL---------LSVYGNKEAVDDELVEIIRGPADDEG 267 (360)
T ss_pred ---HHHhhc--------hhhHHHHHHHhcC---H----HHHHHHH---------HHhccCcccCCHHHHHHHHhhccCCC
Confidence 000000 0000000000000 0 0000000 00000111111112222211111111
Q ss_pred hhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHH-----HHHHHHhCCCCeEEEecCCCCCCch
Q 019089 240 WDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWN-----AERLSRAIPGSTFEVIKNCGHVPQE 314 (346)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~-----~~~~~~~~p~~~~~~i~~~GH~~~~ 314 (346)
....+... ... ....+....+.++++|||+|+|++|.++|++. .+.+.+.+|++++++++++||++++
T Consensus 268 ~~~~~~~~----~~~---~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~ 340 (360)
T PLN02679 268 ALDAFVSI----VTG---PPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHD 340 (360)
T ss_pred hHHHHHHH----Hhc---CCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccc
Confidence 11222111 110 00112334677899999999999999998763 2346667899999999999999999
Q ss_pred hCHHHHHHHHHHHHHHH
Q 019089 315 EKVEEFVSIVARFLQRA 331 (346)
Q Consensus 315 e~pe~~~~~i~~fl~~~ 331 (346)
|+|++|++.|.+|+.+.
T Consensus 341 E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 341 DRPDLVHEKLLPWLAQL 357 (360)
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 99999999999999763
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.5e-32 Score=245.14 Aligned_cols=98 Identities=23% Similarity=0.372 Sum_probs=89.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|+.+++.|.+. ++||++|+||||.|+.+ ...|++...+.++.++++++++
T Consensus 30 vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~~G~G~S~~~---------------~~~~~~~~~a~dl~~ll~~l~~ 92 (295)
T PRK03592 30 IVFLHGNPTSSYLWRNIIPHLAGL--GRCLAPDLIGMGASDKP---------------DIDYTFADHARYLDAWFDALGL 92 (295)
T ss_pred EEEECCCCCCHHHHHHHHHHHhhC--CEEEEEcCCCCCCCCCC---------------CCCCCHHHHHHHHHHHHHHhCC
Confidence 699999999999999999999763 59999999999999642 1248888899999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++++||||||||++|+.+|.++|++|+++|++++.
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 99999999999999999999999999999999973
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.9e-32 Score=240.02 Aligned_cols=240 Identities=23% Similarity=0.310 Sum_probs=155.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|.+ +|+||++|+||||.|+.+ ...|+++..+.++.++++.+++
T Consensus 28 lvllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~---------------~~~~~~~~~~~~~~~~i~~l~~ 90 (276)
T TIGR02240 28 LLIFNGIGANLELVFPFIEALDP--DLEVIAFDVPGVGGSSTP---------------RHPYRFPGLAKLAARMLDYLDY 90 (276)
T ss_pred EEEEeCCCcchHHHHHHHHHhcc--CceEEEECCCCCCCCCCC---------------CCcCcHHHHHHHHHHHHHHhCc
Confidence 69999999999999999999975 489999999999999642 1257788888999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++||||||||++++.+|.++|++|+++|+++++...... .. .+. .. . .+..
T Consensus 91 ~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~-------------------~~~---~~-~---~~~~ 143 (276)
T TIGR02240 91 GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV-PG-------------------KPK---VL-M---MMAS 143 (276)
T ss_pred CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC-CC-------------------chh---HH-H---HhcC
Confidence 99999999999999999999999999999999875321100 00 000 00 0 0000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
...++... ......... +. .. ................. ....++
T Consensus 144 ~~~~~~~~------~~~~~~~~~----~~----------------~~---------~~~~~~~~~~~~~~~~~-~~~~~~ 187 (276)
T TIGR02240 144 PRRYIQPS------HGIHIAPDI----YG----------------GA---------FRRDPELAMAHASKVRS-GGKLGY 187 (276)
T ss_pred chhhhccc------cccchhhhh----cc----------------ce---------eeccchhhhhhhhhccc-CCCchH
Confidence 00000000 000000000 00 00 00000000000000000 000001
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
.. ... .. ........+.++++|+|+|+|++|.++|++.++.+.+.+|++++.++++ ||++++|+|++|
T Consensus 188 ~~---~~~----~~----~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~ 255 (276)
T TIGR02240 188 YW---QLF----AG----LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAV 255 (276)
T ss_pred HH---HHH----HH----cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHH
Confidence 00 000 00 0111224577899999999999999999999999999999999999975 999999999999
Q ss_pred HHHHHHHHHHHh
Q 019089 321 VSIVARFLQRAF 332 (346)
Q Consensus 321 ~~~i~~fl~~~~ 332 (346)
++.|.+|+.+.-
T Consensus 256 ~~~i~~fl~~~~ 267 (276)
T TIGR02240 256 APIIMKFLAEER 267 (276)
T ss_pred HHHHHHHHHHhh
Confidence 999999998753
No 7
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=6.2e-32 Score=232.17 Aligned_cols=267 Identities=23% Similarity=0.273 Sum_probs=161.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+|.+...|.+.++.|++ .++|+++|++|+|+|++|..+.++ .-.....++-+.......++
T Consensus 93 lVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~-----------~~~e~~fvesiE~WR~~~~L 159 (365)
T KOG4409|consen 93 LVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDP-----------TTAEKEFVESIEQWRKKMGL 159 (365)
T ss_pred EEEEeccchhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCc-----------ccchHHHHHHHHHHHHHcCC
Confidence 69999999999999999999987 579999999999999987654211 01122555667778888899
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
+|.+|||||+||+++..+|++||++|++|||++|.+++..... ..+.. .+....+..+..
T Consensus 160 ~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~----------------~~~~~----~~~~~w~~~~~~ 219 (365)
T KOG4409|consen 160 EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDS----------------EPEFT----KPPPEWYKALFL 219 (365)
T ss_pred cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCc----------------chhhc----CCChHHHhhhhh
Confidence 9999999999999999999999999999999999877532100 00000 011111111100
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
+. .....+...+.++.+...++++..+...+.... ...++..-+++.+.. ...++-
T Consensus 220 ~~--~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~--------------------~~~ed~l~~YiY~~n--~~~psg 275 (365)
T KOG4409|consen 220 VA--TNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPS--------------------LIEEDFLHEYIYHCN--AQNPSG 275 (365)
T ss_pred hh--hcCCHHHHHHhccccchHHHhhhhHHHHHhccc--------------------cchhHHHHHHHHHhc--CCCCcH
Confidence 10 001112222233333333332222111110000 001111011111111 111111
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCC--ccEEEEEeCCCCCcChHHHHHHHHh--CCCCeEEEecCCCCCCchhC
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEIS--CPVLIVTGDTDRIVPSWNAERLSRA--IPGSTFEVIKNCGHVPQEEK 316 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvl~i~G~~D~~~~~~~~~~~~~~--~p~~~~~~i~~~GH~~~~e~ 316 (346)
..++. ++ .....+.+.++.+.+..++ ||+++|+|++|++ ....+.++.+. ...+++++|+++||+..+|+
T Consensus 276 E~~fk----~l-~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDn 349 (365)
T KOG4409|consen 276 ETAFK----NL-FEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDN 349 (365)
T ss_pred HHHHH----HH-HhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCC
Confidence 11111 11 2222333445555566555 9999999999986 44556666664 33478999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 019089 317 VEEFVSIVARFLQR 330 (346)
Q Consensus 317 pe~~~~~i~~fl~~ 330 (346)
|+.|++.|.+++++
T Consensus 350 p~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 350 PEFFNQIVLEECDK 363 (365)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2.9e-32 Score=244.02 Aligned_cols=101 Identities=23% Similarity=0.318 Sum_probs=90.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|..+++.|++ .+|+|+++|+||||.|+.+. ....|+++.+++++.++++++++
T Consensus 49 lvliHG~~~~~~~w~~~~~~L~~-~gy~vi~~Dl~G~G~S~~~~-------------~~~~~~~~~~a~~l~~~l~~l~~ 114 (302)
T PRK00870 49 VLLLHGEPSWSYLYRKMIPILAA-AGHRVIAPDLIGFGRSDKPT-------------RREDYTYARHVEWMRSWFEQLDL 114 (302)
T ss_pred EEEECCCCCchhhHHHHHHHHHh-CCCEEEEECCCCCCCCCCCC-------------CcccCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999975 37999999999999996431 11358889999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++++||||||||++++.+|.++|++|+++|++++.
T Consensus 115 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 115 TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 99999999999999999999999999999999864
No 9
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.5e-31 Score=231.40 Aligned_cols=239 Identities=23% Similarity=0.295 Sum_probs=146.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|+.+++.|.+ .|+|+++|+||||.|+.. ..|++...+.++. ++++
T Consensus 16 ivllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~----------------~~~~~~~~~~~l~----~~~~ 73 (256)
T PRK10349 16 LVLLHGWGLNAEVWRCIDEELSS--HFTLHLVDLPGFGRSRGF----------------GALSLADMAEAVL----QQAP 73 (256)
T ss_pred EEEECCCCCChhHHHHHHHHHhc--CCEEEEecCCCCCCCCCC----------------CCCCHHHHHHHHH----hcCC
Confidence 68999999999999999999975 489999999999998631 1356655555433 4578
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++||||||||++++.+|.++|++|+++|++++...... .. . .. .........+..
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~---~~--~--~~----------------~~~~~~~~~~~~ 130 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSA---RD--E--WP----------------GIKPDVLAGFQQ 130 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceec---CC--C--CC----------------cccHHHHHHHHH
Confidence 9999999999999999999999999999999986321100 00 0 00 000000000000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhh-hhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccc
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSAT-LRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG 239 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
.+.. .. ....+..+... ...... .... ......+.. ...+.
T Consensus 131 ---~~~~-------~~----~~~~~~~~~~~~~~~~~~----------------------~~~~-~~~~~~~~~-~~~~~ 172 (256)
T PRK10349 131 ---QLSD-------DF----QRTVERFLALQTMGTETA----------------------RQDA-RALKKTVLA-LPMPE 172 (256)
T ss_pred ---HHHh-------ch----HHHHHHHHHHHHccCchH----------------------HHHH-HHHHHHhhc-cCCCc
Confidence 0000 00 00000000000 000000 0000 000000000 00000
Q ss_pred hhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHH
Q 019089 240 WDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEE 319 (346)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~ 319 (346)
. ..+... ..... +.+....+.++++|||+|+|++|.++|.+.++.+.+.+|++++++++++||++++|+|++
T Consensus 173 ~-~~~~~~-~~~~~------~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~ 244 (256)
T PRK10349 173 V-DVLNGG-LEILK------TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAE 244 (256)
T ss_pred H-HHHHHH-HHHHH------hCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHH
Confidence 0 000000 00000 112345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 019089 320 FVSIVARFLQR 330 (346)
Q Consensus 320 ~~~~i~~fl~~ 330 (346)
|++.|.+|-++
T Consensus 245 f~~~l~~~~~~ 255 (256)
T PRK10349 245 FCHLLVALKQR 255 (256)
T ss_pred HHHHHHHHhcc
Confidence 99999998653
No 10
>PLN02578 hydrolase
Probab=100.00 E-value=1.1e-30 Score=238.37 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=159.9
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|.+ +|+|+++|+||||.|+.+ ...|+....++++.++++.++.
T Consensus 89 vvliHG~~~~~~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~---------------~~~~~~~~~a~~l~~~i~~~~~ 151 (354)
T PLN02578 89 IVLIHGFGASAFHWRYNIPELAK--KYKVYALDLLGFGWSDKA---------------LIEYDAMVWRDQVADFVKEVVK 151 (354)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCc---------------ccccCHHHHHHHHHHHHHHhcc
Confidence 68999999999999999999875 589999999999999753 1357878888889999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhH-HHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLK-VYTILS 159 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (346)
+++++|||||||++++.+|.++|++|+++|+++++........ . ... ...... ....+ +...+.
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~---~---~~~---~~~~~~------~~~~~~~~~~~~ 216 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESR---E---KEE---AIVVEE------TVLTRFVVKPLK 216 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccc---c---ccc---cccccc------chhhHHHhHHHH
Confidence 9999999999999999999999999999999986432110000 0 000 000000 00000 000000
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccc
Q 019089 160 MFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG 239 (346)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
.. ............... ....+.. ....+.......+...+.+..+...++
T Consensus 217 ~~------------------~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (354)
T PLN02578 217 EW------------------FQRVVLGFLFWQAKQ---PSRIESV--------LKSVYKDKSNVDDYLVESITEPAADPN 267 (354)
T ss_pred HH------------------HHHHHHHHHHHHhcC---HHHHHHH--------HHHhcCCcccCCHHHHHHHHhcccCCc
Confidence 00 000000000000000 0000000 000011111111122222211111121
Q ss_pred hhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHH
Q 019089 240 WDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEE 319 (346)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~ 319 (346)
....+.+.....+.. ....+..+.+.++++|+++|+|++|.+++.+.++.+.+.+|+++++++ ++||++++|+|++
T Consensus 268 ~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~ 343 (354)
T PLN02578 268 AGEVYYRLMSRFLFN---QSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQ 343 (354)
T ss_pred hHHHHHHHHHHHhcC---CCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHH
Confidence 111111111111110 011234456788999999999999999999999999999999999998 6999999999999
Q ss_pred HHHHHHHHHH
Q 019089 320 FVSIVARFLQ 329 (346)
Q Consensus 320 ~~~~i~~fl~ 329 (346)
|++.|.+|++
T Consensus 344 ~~~~I~~fl~ 353 (354)
T PLN02578 344 VNKALLEWLS 353 (354)
T ss_pred HHHHHHHHHh
Confidence 9999999985
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=5.4e-31 Score=233.63 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=88.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||++.++..|+.+++.|.+ +|+||++|+||||.|+.+. ...|+++..+.++.++++++++
T Consensus 37 iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 100 (286)
T PRK03204 37 ILLCHGNPTWSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPS--------------GFGYQIDEHARVIGEFVDHLGL 100 (286)
T ss_pred EEEECCCCccHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCC--------------ccccCHHHHHHHHHHHHHHhCC
Confidence 68999999999999999998875 5899999999999996432 1247888888999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+++++|||||||++++.+|..+|++|+++|++++.
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 99999999999999999999999999999998764
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=3.4e-30 Score=239.25 Aligned_cols=102 Identities=21% Similarity=0.361 Sum_probs=86.8
Q ss_pred CEeeccCCCCccchhh-hHHHHhh--hCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHH-HHHHH
Q 019089 1 MVLFHGFGASVFSWNR-AMKPLAK--TTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLAT-LYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~-~~~~l~~--~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~-~~ll~ 76 (346)
|||+||++++...|.. +++.|.+ ..+|+||++|+||||.|+.+. ...|+++..+.++ ..+++
T Consensus 204 VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~--------------~~~ytl~~~a~~l~~~ll~ 269 (481)
T PLN03087 204 VLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA--------------DSLYTLREHLEMIERSVLE 269 (481)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC--------------CCcCCHHHHHHHHHHHHHH
Confidence 6899999999999985 4466653 136999999999999996431 1248888888887 48999
Q ss_pred HhcccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++++++++||||||||++++.+|.++|++|+++|+++|+.
T Consensus 270 ~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 270 RYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 9999999999999999999999999999999999998754
No 13
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=3.4e-30 Score=234.89 Aligned_cols=102 Identities=26% Similarity=0.406 Sum_probs=91.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|+++++.|.+ +|+||++|+||||.|+.+.. .....|++...+.++.++++++++
T Consensus 130 ivllHG~~~~~~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~-----------~~~~~ys~~~~a~~l~~~i~~l~~ 196 (383)
T PLN03084 130 VLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQP-----------GYGFNYTLDEYVSSLESLIDELKS 196 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcc-----------cccccCCHHHHHHHHHHHHHHhCC
Confidence 69999999999999999999975 58999999999999975321 012358999999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++++||||||||++++.+|.++|++|+++|+++|+
T Consensus 197 ~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~ 231 (383)
T PLN03084 197 DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPP 231 (383)
T ss_pred CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCC
Confidence 99999999999999999999999999999999975
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=2.8e-30 Score=228.81 Aligned_cols=246 Identities=26% Similarity=0.390 Sum_probs=148.4
Q ss_pred CEeeccCCCCccchhhh---HHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRA---MKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~---~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
||||||++.+...|..+ +..+.+ .+|+|+++|+||||.|+.+... ..++. ..+.++.++++.
T Consensus 33 ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~-------------~~~~~-~~~~~l~~~l~~ 97 (282)
T TIGR03343 33 VIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMD-------------EQRGL-VNARAVKGLMDA 97 (282)
T ss_pred EEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCc-------------ccccc-hhHHHHHHHHHH
Confidence 69999999999888643 445554 3799999999999999743110 01111 346778899999
Q ss_pred hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHH
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTI 157 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (346)
+++++++++||||||++++.+|.++|++|+++|+++|....+..... .+. .........
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-------------------~~~--~~~~~~~~~ 156 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAP-------------------MPM--EGIKLLFKL 156 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCcccccc-------------------Cch--HHHHHHHHH
Confidence 99999999999999999999999999999999999875321100000 000 000000000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccc
Q 019089 158 LSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRV 237 (346)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (346)
+ . ...... +...+....... .. .+............ ..
T Consensus 157 ~-------~-------~~~~~~----~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~---~~ 194 (282)
T TIGR03343 157 Y-------A-------EPSYET----LKQMLNVFLFDQ--------------------SL-ITEELLQGRWENIQ---RQ 194 (282)
T ss_pred h-------c-------CCCHHH----HHHHHhhCccCc--------------------cc-CcHHHHHhHHHHhh---cC
Confidence 0 0 000000 000000000000 00 00000000000000 00
Q ss_pred cchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCH
Q 019089 238 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV 317 (346)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~p 317 (346)
+ .....+...... ......+....+.++++|+|+|+|++|.+++++.++++++.+|++++++++++||++++|+|
T Consensus 195 ~---~~~~~~~~~~~~--~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p 269 (282)
T TIGR03343 195 P---EHLKNFLISSQK--APLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHA 269 (282)
T ss_pred H---HHHHHHHHhccc--cccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCH
Confidence 0 000000000000 00011223345788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 019089 318 EEFVSIVARFLQ 329 (346)
Q Consensus 318 e~~~~~i~~fl~ 329 (346)
++|++.|.+|+.
T Consensus 270 ~~~~~~i~~fl~ 281 (282)
T TIGR03343 270 DAFNRLVIDFLR 281 (282)
T ss_pred HHHHHHHHHHhh
Confidence 999999999985
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=9.1e-30 Score=222.17 Aligned_cols=236 Identities=19% Similarity=0.266 Sum_probs=153.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++++...|..++..|.+ +|+||++|+||||.|..+ ..|++...++++.++++.+++
T Consensus 19 iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~----------------~~~~~~~~~~d~~~~l~~l~~ 80 (255)
T PRK10673 19 IVLVHGLFGSLDNLGVLARDLVN--DHDIIQVDMRNHGLSPRD----------------PVMNYPAMAQDLLDTLDALQI 80 (255)
T ss_pred EEEECCCCCchhHHHHHHHHHhh--CCeEEEECCCCCCCCCCC----------------CCCCHHHHHHHHHHHHHHcCC
Confidence 69999999999999999999875 589999999999998632 247788889999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++||||||||++++.+|.++|++|+++|++++....... ......+..+..
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~---------------------------~~~~~~~~~~~~ 133 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHV---------------------------RRHDEIFAAINA 133 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccc---------------------------hhhHHHHHHHHH
Confidence 99999999999999999999999999999999742110000 000000000000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
. .. ......... ...+.. ..............+........
T Consensus 134 ~----~~---~~~~~~~~~-~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~- 174 (255)
T PRK10673 134 V----SE---AGATTRQQA-AAIMRQ------------------------------HLNEEGVIQFLLKSFVDGEWRFN- 174 (255)
T ss_pred h----hh---cccccHHHH-HHHHHH------------------------------hcCCHHHHHHHHhcCCcceeEee-
Confidence 0 00 000000000 000000 00000000001000000000000
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
........... ...+.+..+++|+|+|+|++|..++.+..+.+++.+|++++.+++++||++++|+|++|
T Consensus 175 ~~~~~~~~~~~----------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 244 (255)
T PRK10673 175 VPVLWDQYPHI----------VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAV 244 (255)
T ss_pred HHHHHHhHHHH----------hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHH
Confidence 00000000000 00124567889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 019089 321 VSIVARFLQR 330 (346)
Q Consensus 321 ~~~i~~fl~~ 330 (346)
++.|.+|+.+
T Consensus 245 ~~~l~~fl~~ 254 (255)
T PRK10673 245 LRAIRRYLND 254 (255)
T ss_pred HHHHHHHHhc
Confidence 9999999874
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=2.6e-29 Score=213.84 Aligned_cols=228 Identities=30% Similarity=0.451 Sum_probs=149.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|. .+|+|+++|+||||.|+.+.. ...+++...+.++.+++++++.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~-------------~~~~~~~~~~~~l~~~l~~~~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA--RGYRVIAFDLPGHGRSDPPPD-------------YSPYSIEDYAEDLAELLDALGI 65 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH--TTSEEEEEECTTSTTSSSHSS-------------GSGGSHHHHHHHHHHHHHHTTT
T ss_pred eEEECCCCCCHHHHHHHHHHHh--CCCEEEEEecCCccccccccc-------------cCCcchhhhhhhhhhccccccc
Confidence 6999999999999999999995 479999999999999975321 2357888899999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++|+||||||++++.++.++|++|+++|+++|....+.... .. ........+.
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~---------------------~~---~~~~~~~~~~- 120 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPS---------------------RS---FGPSFIRRLL- 120 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHC---------------------HH---HHHHHHHHHH-
T ss_pred ccccccccccccccccccccccccccccceeeccccccccccc---------------------cc---ccchhhhhhh-
Confidence 9999999999999999999999999999999997542110000 00 0000000000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
. .............+. .. .... .....+.. .
T Consensus 121 ------~-------~~~~~~~~~~~~~~~------------~~--------------~~~~-~~~~~~~~---------~ 151 (228)
T PF12697_consen 121 ------A-------WRSRSLRRLASRFFY------------RW--------------FDGD-EPEDLIRS---------S 151 (228)
T ss_dssp ------H-------HHHHHHHHHHHHHHH------------HH--------------HTHH-HHHHHHHH---------H
T ss_pred ------h-------ccccccccccccccc------------cc--------------cccc-cccccccc---------c
Confidence 0 000000000000000 00 0000 00000000 0
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
.+.+.+...... ...+....+..+++|+++|+|++|.+++.+..+.+.+..|++++.+++++||++++|+|++|
T Consensus 152 ~~~~~~~~~~~~------~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 225 (228)
T PF12697_consen 152 RRALAEYLRSNL------WQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEV 225 (228)
T ss_dssp HHHHHHHHHHHH------HHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHH
T ss_pred cccccccccccc------ccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHH
Confidence 000111000000 00123346678899999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 019089 321 VSI 323 (346)
Q Consensus 321 ~~~ 323 (346)
++.
T Consensus 226 ~~a 228 (228)
T PF12697_consen 226 AEA 228 (228)
T ss_dssp HHH
T ss_pred hcC
Confidence 874
No 17
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=7.2e-31 Score=234.21 Aligned_cols=260 Identities=27% Similarity=0.433 Sum_probs=157.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+|||+++...|+++++.|.+..+++|+++|++|||.|+..+ ....|+....+..+..++.+.+.
T Consensus 61 vlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~-------------~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 61 VLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLP-------------RGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred EEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCC-------------CCCceehhHHHHHHHHHHHhhcC
Confidence 68999999999999999999988656899999999999654321 12359988888888899999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhhe---eeccccccccccccccccCCCCCCccccccccccccccchhhHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALI---LIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTI 157 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv---li~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (346)
+++++|||||||++|+.+|+.+|+.|+++| +++++....... .. ...+....
T Consensus 128 ~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~----------------------~~---~~~~~~~~ 182 (326)
T KOG1454|consen 128 EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKG----------------------IK---GLRRLLDK 182 (326)
T ss_pred cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcc----------------------hh---HHHHhhhh
Confidence 999999999999999999999999999999 555433211000 00 00000000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccc
Q 019089 158 LSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRV 237 (346)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (346)
+ +.............. ...+.. ...... .....+.....+....-...+...
T Consensus 183 ~------~~~~~~~~p~~~~~~-~~~~~~---------------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (326)
T KOG1454|consen 183 F------LSALELLIPLSLTEP-VRLVSE---------------GLLRCL------KVVYTDPSRLLEKLLHLLSRPVKE 234 (326)
T ss_pred h------ccHhhhcCccccccc-hhheeH---------------hhhcce------eeeccccccchhhhhhheeccccc
Confidence 0 000000000000000 000000 000000 000000000011111110000000
Q ss_pred cchhHHHHHHHHHHhhcccCCCChhHHhhcccCC-ccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhC
Q 019089 238 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 316 (346)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~ 316 (346)
..+......+. .............+.++. +|+|+|||++|.++|.+.+..+.+++|++++++|+++||.+|+|+
T Consensus 235 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~ 309 (326)
T KOG1454|consen 235 HFHRDARLSLF-----LELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLER 309 (326)
T ss_pred chhhhheeeEE-----EeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCC
Confidence 00111000000 000000012223455666 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 019089 317 VEEFVSIVARFLQRA 331 (346)
Q Consensus 317 pe~~~~~i~~fl~~~ 331 (346)
|++|++.|..|+...
T Consensus 310 Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 310 PEEVAALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999865
No 18
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=5.4e-29 Score=227.92 Aligned_cols=107 Identities=20% Similarity=0.157 Sum_probs=82.8
Q ss_pred CEeeccCCCCccchh--hhHHHHhh------hCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWN--RAMKPLAK------TTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~--~~~~~l~~------~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~ 72 (346)
||||||+++++..|. .+.+.|.. ..+|+||++|+||||.|+.+... .......|+++..+.++.
T Consensus 72 lvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~--------~~~~~~~~~~~~~a~~~~ 143 (360)
T PRK06489 72 VLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG--------LRAAFPRYDYDDMVEAQY 143 (360)
T ss_pred EEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC--------CCCCCCcccHHHHHHHHH
Confidence 699999999998886 34444410 13689999999999999753210 000012488888888877
Q ss_pred HH-HHHhcccceE-EEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 73 YF-IDILAAEKAI-LVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 73 ~l-l~~l~~~~~~-lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++ ++++++++++ ||||||||++|+.+|.++|++|+++|++++.
T Consensus 144 ~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~ 188 (360)
T PRK06489 144 RLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQ 188 (360)
T ss_pred HHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccC
Confidence 75 4889999986 8999999999999999999999999999863
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=2.4e-29 Score=217.80 Aligned_cols=96 Identities=20% Similarity=0.175 Sum_probs=84.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|+++++.|. +|+|+++|+||||.|+.+. .+++...+.++.++++++++
T Consensus 5 vvllHG~~~~~~~w~~~~~~l~---~~~vi~~D~~G~G~S~~~~----------------~~~~~~~~~~l~~~l~~~~~ 65 (242)
T PRK11126 5 LVFLHGLLGSGQDWQPVGEALP---DYPRLYIDLPGHGGSAAIS----------------VDGFADVSRLLSQTLQSYNI 65 (242)
T ss_pred EEEECCCCCChHHHHHHHHHcC---CCCEEEecCCCCCCCCCcc----------------ccCHHHHHHHHHHHHHHcCC
Confidence 6999999999999999998873 5899999999999996421 23677888999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhh-hhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPER-VAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvli~p~ 115 (346)
+++++|||||||.+|+.+|.++|++ |++++++++.
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 9999999999999999999999765 9999998753
No 20
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=8.6e-29 Score=225.06 Aligned_cols=72 Identities=19% Similarity=0.281 Sum_probs=66.7
Q ss_pred hHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecC-CCCCCchhCHHHHHHHHHHHHHHHhC
Q 019089 262 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 262 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~-~GH~~~~e~pe~~~~~i~~fl~~~~~ 333 (346)
+....+.+|++|||+|+|++|.++|+..++.+.+.+|+++++++++ +||++++|+|+.|++.|.+|+++.+.
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999999999999999999998 99999999999999999999998764
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=5.1e-29 Score=216.84 Aligned_cols=239 Identities=23% Similarity=0.367 Sum_probs=154.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|..+++.|.+ +|+|+++|+||||.|..+. ...|++...+.++.+++++++.
T Consensus 16 iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~--------------~~~~~~~~~~~~~~~~i~~~~~ 79 (257)
T TIGR03611 16 VVLSSGLGGSGSYWAPQLDVLTQ--RFHVVTYDHRGTGRSPGEL--------------PPGYSIAHMADDVLQLLDALNI 79 (257)
T ss_pred EEEEcCCCcchhHHHHHHHHHHh--ccEEEEEcCCCCCCCCCCC--------------cccCCHHHHHHHHHHHHHHhCC
Confidence 68999999999999998888864 5899999999999986421 2357888889999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++|+||||||++++.+|.++|++|+++|++++....... ... .+..
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~-----------------------------~~~---~~~~ 127 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPH-----------------------------TRR---CFDV 127 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChh-----------------------------HHH---HHHH
Confidence 99999999999999999999999999999999864211000 000 0000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCC--hHhHHHHHHHhcCccccc
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNS--KEVAEHVIEGYTKPLRVK 238 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 238 (346)
....... ........ ...... + ...|... ............ .+ .
T Consensus 128 ~~~~~~~------~~~~~~~~-~~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~~~-~~--~ 173 (257)
T TIGR03611 128 RIALLQH------AGPEAYVH-AQALFL---Y---------------------PADWISENAARLAADEAHALA-HF--P 173 (257)
T ss_pred HHHHHhc------cCcchhhh-hhhhhh---c---------------------cccHhhccchhhhhhhhhccc-cc--C
Confidence 0000000 00000000 000000 0 0000000 000000000000 00 0
Q ss_pred chhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHH
Q 019089 239 GWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 318 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe 318 (346)
+. ..+...... .. ..+....+.++++|+++++|++|.++|++.++++.+.+|+++++.++++||++++|+|+
T Consensus 174 ~~-~~~~~~~~~-~~------~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 245 (257)
T TIGR03611 174 GK-ANVLRRINA-LE------AFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPE 245 (257)
T ss_pred cc-HHHHHHHHH-HH------cCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHH
Confidence 00 000000000 00 11223456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 019089 319 EFVSIVARFLQ 329 (346)
Q Consensus 319 ~~~~~i~~fl~ 329 (346)
+|++.|.+|++
T Consensus 246 ~~~~~i~~fl~ 256 (257)
T TIGR03611 246 TFNRALLDFLK 256 (257)
T ss_pred HHHHHHHHHhc
Confidence 99999999985
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=3.2e-29 Score=221.26 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=155.0
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++++...|+.+.+.|++ +|+|+++|+||||.|+.+. ...|++...+.++.++++++++
T Consensus 31 vv~~hG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~--------------~~~~~~~~~~~~l~~~i~~~~~ 94 (278)
T TIGR03056 31 LLLLHGTGASTHSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPF--------------RFRFTLPSMAEDLSALCAAEGL 94 (278)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhh--CcEEEeecCCCCCCCCCcc--------------ccCCCHHHHHHHHHHHHHHcCC
Confidence 69999999999999999999975 5899999999999986421 1358888999999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++|+||||||++++.+|.++|++++++|++++......... . . .. ....+. + .
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~--------~----~------~~---~~~~~~---~-~ 149 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMA--------G----T------LF---PYMARV---L-A 149 (278)
T ss_pred CCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccccccc--------c----c------cc---chhhHh---h-h
Confidence 9999999999999999999999999999999986432110000 0 0 00 000000 0 0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
....... .........+..... + . . . ........ .......+.. ...
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~~~~----~----~------------~-~------~~~~~~~~-~~~~~~~~~~----~~~ 196 (278)
T TIGR03056 150 CNPFTPP-MMSRGAADQQRVERL----I----R------------D-T------GSLLDKAG-MTYYGRLIRS----PAH 196 (278)
T ss_pred hcccchH-HHHhhcccCcchhHH----h----h------------c-c------ccccccch-hhHHHHhhcC----chh
Confidence 0000000 000000000000000 0 0 0 0 00000000 0000000000 000
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
.+...+. ... .........+.++++|+++|+|++|.++|.+.++.+.+.+|++++..++++||++++|+|++|
T Consensus 197 ~~~~~~~----~~~---~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 269 (278)
T TIGR03056 197 VDGALSM----MAQ---WDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGV 269 (278)
T ss_pred hhHHHHH----hhc---ccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHH
Confidence 0000000 000 001112345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 019089 321 VSIVARFLQ 329 (346)
Q Consensus 321 ~~~i~~fl~ 329 (346)
++.|.+|++
T Consensus 270 ~~~i~~f~~ 278 (278)
T TIGR03056 270 VGLILQAAE 278 (278)
T ss_pred HHHHHHHhC
Confidence 999999974
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=2.6e-28 Score=211.10 Aligned_cols=236 Identities=23% Similarity=0.410 Sum_probs=153.0
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++.++..|..+++.|.+ +|+|+++|+||||.|+.+ ...|++...+.++.++++.++.
T Consensus 16 li~~hg~~~~~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~---------------~~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 16 LVFINSLGTDLRMWDPVLPALTP--DFRVLRYDKRGHGLSDAP---------------EGPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred EEEEcCcccchhhHHHHHHHhhc--ccEEEEecCCCCCCCCCC---------------CCCCCHHHHHHHHHHHHHHhCC
Confidence 58999999999999999888864 699999999999998532 1257788888999999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++|+||||||++++.+|.++|++|+++|++++....... ..+......+..
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~---------------------------~~~~~~~~~~~~ 131 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTP---------------------------ESWNARIAAVRA 131 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCch---------------------------hhHHHHHhhhhh
Confidence 99999999999999999999999999999999864211000 000000000000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
. .............+...... ............... .....+
T Consensus 132 ------~-------~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~-~~~~~~ 173 (251)
T TIGR02427 132 ------E-------GLAALADAVLERWFTPGFRE------------------------AHPARLDLYRNMLVR-QPPDGY 173 (251)
T ss_pred ------c-------cHHHHHHHHHHHHccccccc------------------------CChHHHHHHHHHHHh-cCHHHH
Confidence 0 00000000000000000000 000000000000000 000000
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
..... .+. ..+....+.++++|+++++|++|.++|.+..+.+.+.+|+.++.+++++||++++|+|+++
T Consensus 174 ~~~~~-----~~~------~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 242 (251)
T TIGR02427 174 AGCCA-----AIR------DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAF 242 (251)
T ss_pred HHHHH-----HHh------cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHH
Confidence 00000 000 1123345678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 019089 321 VSIVARFLQ 329 (346)
Q Consensus 321 ~~~i~~fl~ 329 (346)
++.|.+|+.
T Consensus 243 ~~~i~~fl~ 251 (251)
T TIGR02427 243 NAALRDFLR 251 (251)
T ss_pred HHHHHHHhC
Confidence 999999973
No 24
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=1.5e-28 Score=211.92 Aligned_cols=239 Identities=23% Similarity=0.282 Sum_probs=143.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|.+ +|+|+++|+||||.|+.. ..+++...+.++.++ ..
T Consensus 7 iv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~----------------~~~~~~~~~~~~~~~----~~ 64 (245)
T TIGR01738 7 LVLIHGWGMNAEVFRCLDEELSA--HFTLHLVDLPGHGRSRGF----------------GPLSLADAAEAIAAQ----AP 64 (245)
T ss_pred EEEEcCCCCchhhHHHHHHhhcc--CeEEEEecCCcCccCCCC----------------CCcCHHHHHHHHHHh----CC
Confidence 69999999999999999998875 589999999999998531 134555555544433 33
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
+++++|||||||++++.+|.++|++|+++|++++...... ... ... .........+..
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~---~~~-----------------~~~--~~~~~~~~~~~~ 122 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSA---RED-----------------WPE--GIKPDVLTGFQQ 122 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCccccc---CCc-----------------ccc--cCCHHHHHHHHH
Confidence 7899999999999999999999999999999976421000 000 000 000000000000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
.... ....... ..+... . +. ..............+.. ...+..
T Consensus 123 ---~~~~-------~~~~~~~----~~~~~~-----------~----~~-------~~~~~~~~~~~~~~~~~-~~~~~~ 165 (245)
T TIGR01738 123 ---QLSD-------DYQRTIE----RFLALQ-----------T----LG-------TPTARQDARALKQTLLA-RPTPNV 165 (245)
T ss_pred ---Hhhh-------hHHHHHH----HHHHHH-----------H----hc-------CCccchHHHHHHHHhhc-cCCCCH
Confidence 0000 0000000 000000 0 00 00000000000000000 000000
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
..+...... . ...+....+.++++|+++|+|++|.++|++..+.+.+.+|++++.+++++||++++|+|++|
T Consensus 166 -~~~~~~~~~-~------~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 237 (245)
T TIGR01738 166 -QVLQAGLEI-L------ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAF 237 (245)
T ss_pred -HHHHHHHHH-h------hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHH
Confidence 011110000 0 01123346778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 019089 321 VSIVARFL 328 (346)
Q Consensus 321 ~~~i~~fl 328 (346)
++.|.+|+
T Consensus 238 ~~~i~~fi 245 (245)
T TIGR01738 238 CALLVAFK 245 (245)
T ss_pred HHHHHhhC
Confidence 99999985
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.3e-28 Score=224.63 Aligned_cols=242 Identities=18% Similarity=0.284 Sum_probs=150.0
Q ss_pred CEeeccCCCCccc-hhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFS-WNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~-w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|||+||+++++.. |+.++..|.+ .||+|+++|+||||.|+.+. ...+++...+.++.++++.++
T Consensus 90 iv~lHG~~~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~--------------~~~~~~~~~~~dv~~~l~~l~ 154 (349)
T PLN02385 90 VCFCHGYGDTCTFFFEGIARKIAS-SGYGVFAMDYPGFGLSEGLH--------------GYIPSFDDLVDDVIEHYSKIK 154 (349)
T ss_pred EEEECCCCCccchHHHHHHHHHHh-CCCEEEEecCCCCCCCCCCC--------------CCcCCHHHHHHHHHHHHHHHH
Confidence 6899999998764 6788888876 48999999999999996421 112467778888888888876
Q ss_pred cc------ceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhH
Q 019089 80 AE------KAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLK 153 (346)
Q Consensus 80 ~~------~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (346)
.+ +++|+||||||++++.+|.++|++|+++|+++|....... ..+. .....
T Consensus 155 ~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~---------------------~~~~--~~~~~ 211 (349)
T PLN02385 155 GNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADD---------------------VVPP--PLVLQ 211 (349)
T ss_pred hccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccccc---------------------ccCc--hHHHH
Confidence 43 7999999999999999999999999999999874311000 0000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcC
Q 019089 154 VYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK 233 (346)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
.... +.. ..... .. ... . . .... .+... ..+... .+..
T Consensus 212 ~~~~-------~~~----~~p~~-----~~----~~~--~-~----~~~~-------------~~~~~-~~~~~~-~~~~ 249 (349)
T PLN02385 212 ILIL-------LAN----LLPKA-----KL----VPQ--K-D----LAEL-------------AFRDL-KKRKMA-EYNV 249 (349)
T ss_pred HHHH-------HHH----HCCCc-----ee----cCC--C-c----cccc-------------cccCH-HHHHHh-hcCc
Confidence 0000 000 00000 00 000 0 0 0000 00000 000000 0000
Q ss_pred -cccc-cchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhC--CCCeEEEecCCC
Q 019089 234 -PLRV-KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCG 309 (346)
Q Consensus 234 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~G 309 (346)
.+.. .... ...+.... ..+....+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++|
T Consensus 250 ~~~~~~~~~~-~~~~~l~~---------~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~g 319 (349)
T PLN02385 250 IAYKDKPRLR-TAVELLRT---------TQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAY 319 (349)
T ss_pred ceeCCCcchH-HHHHHHHH---------HHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCe
Confidence 0000 0000 11110000 01233457789999999999999999999999998887 568999999999
Q ss_pred CCCchhCHHH----HHHHHHHHHHHHh
Q 019089 310 HVPQEEKVEE----FVSIVARFLQRAF 332 (346)
Q Consensus 310 H~~~~e~pe~----~~~~i~~fl~~~~ 332 (346)
|++++|+|++ +++.|.+|+.+..
T Consensus 320 H~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 320 HSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred eecccCCChhhHHHHHHHHHHHHHHhc
Confidence 9999999987 7888999998764
No 26
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=2.3e-28 Score=222.33 Aligned_cols=97 Identities=26% Similarity=0.291 Sum_probs=80.5
Q ss_pred CEeeccCCCCcc------------chhhhHH---HHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH
Q 019089 1 MVLFHGFGASVF------------SWNRAMK---PLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMA 65 (346)
Q Consensus 1 ivllHG~~~~~~------------~w~~~~~---~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~ 65 (346)
+|||||+.+++. .|..++. .|.. .+|+||++|+||||.|.. ..|++.
T Consensus 60 ~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~-~~~~Vi~~Dl~G~g~s~~-----------------~~~~~~ 121 (343)
T PRK08775 60 VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP-ARFRLLAFDFIGADGSLD-----------------VPIDTA 121 (343)
T ss_pred EEEEecCCCcccccccccCCCCCCcchhccCCCCccCc-cccEEEEEeCCCCCCCCC-----------------CCCCHH
Confidence 478877777665 6887775 4632 258999999999997731 246777
Q ss_pred HHHHHHHHHHHHhcccce-EEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 66 FSVLATLYFIDILAAEKA-ILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 66 ~~~~~~~~ll~~l~~~~~-~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
..+.++.+++++++++++ +||||||||+||+.+|.++|++|+++|++++.
T Consensus 122 ~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 122 DQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred HHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 889999999999999875 79999999999999999999999999999874
No 27
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=1.8e-27 Score=210.34 Aligned_cols=233 Identities=15% Similarity=0.252 Sum_probs=144.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh--
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-- 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l-- 78 (346)
|+|+||+++++..|..++..|.+ .||+|+++|+||||.|+.... ...++...+.++..+++.+
T Consensus 28 v~llHG~~~~~~~~~~~~~~l~~-~g~~via~D~~G~G~S~~~~~--------------~~~~~~~~~~d~~~~l~~~~~ 92 (276)
T PHA02857 28 VFISHGAGEHSGRYEELAENISS-LGILVFSHDHIGHGRSNGEKM--------------MIDDFGVYVRDVVQHVVTIKS 92 (276)
T ss_pred EEEeCCCccccchHHHHHHHHHh-CCCEEEEccCCCCCCCCCccC--------------CcCCHHHHHHHHHHHHHHHHh
Confidence 46679999999999999999976 479999999999999863210 1123344455555555543
Q ss_pred --cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHH
Q 019089 79 --AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYT 156 (346)
Q Consensus 79 --~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
+.++++|+||||||++|+.+|.++|++|+++|+++|... +.. . +...
T Consensus 93 ~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~-~~~----------------------~-----~~~~--- 141 (276)
T PHA02857 93 TYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN-AEA----------------------V-----PRLN--- 141 (276)
T ss_pred hCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc-ccc----------------------c-----cHHH---
Confidence 346899999999999999999999999999999987431 100 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCccc
Q 019089 157 ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLR 236 (346)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (346)
.+... ... .+ ........ + ...+.... . .........+..
T Consensus 142 ~~~~~---~~~---------------~~---~~~~~~~~------------~-----~~~~~~~~-~-~~~~~~~~~~~~ 181 (276)
T PHA02857 142 LLAAK---LMG---------------IF---YPNKIVGK------------L-----CPESVSRD-M-DEVYKYQYDPLV 181 (276)
T ss_pred HHHHH---HHH---------------Hh---CCCCccCC------------C-----CHhhccCC-H-HHHHHHhcCCCc
Confidence 00000 000 00 00000000 0 00000000 0 000000001110
Q ss_pred c-----cchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhC-CCCeEEEecCCCC
Q 019089 237 V-----KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI-PGSTFEVIKNCGH 310 (346)
Q Consensus 237 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-p~~~~~~i~~~GH 310 (346)
. ..|...+... ..+....+.++++|+|+|+|++|.++|++.+..+.+.+ +++++.+++++||
T Consensus 182 ~~~~~~~~~~~~~~~~------------~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH 249 (276)
T PHA02857 182 NHEKIKAGFASQVLKA------------TNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKH 249 (276)
T ss_pred cCCCccHHHHHHHHHH------------HHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcc
Confidence 0 0111111100 11233567889999999999999999999999998876 5689999999999
Q ss_pred CCchhCH---HHHHHHHHHHHHHH
Q 019089 311 VPQEEKV---EEFVSIVARFLQRA 331 (346)
Q Consensus 311 ~~~~e~p---e~~~~~i~~fl~~~ 331 (346)
.++.|++ +++.+.+.+|+.+.
T Consensus 250 ~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 250 HLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred cccCCchhHHHHHHHHHHHHHHHh
Confidence 9999987 47888999999875
No 28
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=2.1e-27 Score=208.87 Aligned_cols=100 Identities=24% Similarity=0.394 Sum_probs=87.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA- 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~- 79 (346)
|||+||++.+...|+.+...|.+ .||+|+++|+||||.|... +...++++..+.++.+++++++
T Consensus 21 vvliHG~~~~~~~w~~~~~~L~~-~g~~vi~~dl~g~G~s~~~--------------~~~~~~~~~~~~~l~~~i~~l~~ 85 (273)
T PLN02211 21 FVLIHGISGGSWCWYKIRCLMEN-SGYKVTCIDLKSAGIDQSD--------------ADSVTTFDEYNKPLIDFLSSLPE 85 (273)
T ss_pred EEEECCCCCCcCcHHHHHHHHHh-CCCEEEEecccCCCCCCCC--------------cccCCCHHHHHHHHHHHHHhcCC
Confidence 69999999999999999888875 4799999999999987421 1124788888888999999985
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.++++||||||||+++..++.++|++|+++|++++.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 589999999999999999999999999999999764
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.7e-27 Score=220.07 Aligned_cols=104 Identities=31% Similarity=0.366 Sum_probs=83.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY-SMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y-s~~~~~~~~~~ll~~l~ 79 (346)
|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+... ..... ..+..+.++.++++.++
T Consensus 108 vvllHG~~~~~~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~-----------~~~~~~~~~~~~~~i~~~~~~l~ 174 (402)
T PLN02894 108 LVMVHGYGASQGFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFT-----------CKSTEETEAWFIDSFEEWRKAKN 174 (402)
T ss_pred EEEECCCCcchhHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcc-----------cccHHHHHHHHHHHHHHHHHHcC
Confidence 68999999999999988888875 489999999999999753210 00001 11223455678888889
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 117 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~ 117 (346)
+++++|+||||||++++.+|.++|++|+++|+++|..+
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~ 212 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGF 212 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccc
Confidence 99999999999999999999999999999999987654
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=3.7e-27 Score=208.36 Aligned_cols=104 Identities=18% Similarity=0.259 Sum_probs=84.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|...+..+....||+|+++|+||||.|..+.. ....|+++..+.++.+++++++.
T Consensus 28 vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 95 (288)
T TIGR01250 28 LLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD------------SDELWTIDYFVDELEEVREKLGL 95 (288)
T ss_pred EEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc------------ccccccHHHHHHHHHHHHHHcCC
Confidence 689999877665555545555443479999999999999864321 01137888888889999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++++|+||||||++++.+|.++|++|+++|++++..
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 999999999999999999999999999999998643
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=1.9e-27 Score=217.08 Aligned_cols=111 Identities=21% Similarity=0.316 Sum_probs=83.7
Q ss_pred CEeeccCCCCcc-----------chhhhHH---HHhhhCCCeEEEEcCCC--CCCCCCCCCCCCCCCCCCCCCCCCCchh
Q 019089 1 MVLFHGFGASVF-----------SWNRAMK---PLAKTTSSKVLAFDRPA--FGLTSRVFPFQQPTPDTENKKPLNPYSM 64 (346)
Q Consensus 1 ivllHG~~~~~~-----------~w~~~~~---~l~~~~~~~via~Dl~G--~G~S~~~~~~~~~~~~~~~~~~~~~ys~ 64 (346)
|||+||+++++. .|+.++. .|.. .+|+||++|+|| ||.|..... .+... ........|++
T Consensus 34 vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~D~~G~~~g~s~~~~~--~~~~~-~~~~~~~~~~~ 109 (351)
T TIGR01392 34 VLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-DRYFVVCSNVLGGCYGSTGPSSI--NPGGR-PYGSDFPLITI 109 (351)
T ss_pred EEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-CceEEEEecCCCCCCCCCCCCCC--CCCCC-cCCCCCCCCcH
Confidence 689999999874 4776652 4433 469999999999 565532110 00000 00001235899
Q ss_pred HHHHHHHHHHHHHhcccc-eEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 65 AFSVLATLYFIDILAAEK-AILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 65 ~~~~~~~~~ll~~l~~~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
...+.++.++++++++++ ++||||||||++++.+|.++|++|+++|++++.
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 999999999999999999 999999999999999999999999999999864
No 32
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.1e-26 Score=213.72 Aligned_cols=113 Identities=18% Similarity=0.268 Sum_probs=83.1
Q ss_pred CEeeccCCCCccc-------------hhhhHH---HHhhhCCCeEEEEcCCCC-CCCCCCCCCCCCCCCCCCCCCCCCch
Q 019089 1 MVLFHGFGASVFS-------------WNRAMK---PLAKTTSSKVLAFDRPAF-GLTSRVFPFQQPTPDTENKKPLNPYS 63 (346)
Q Consensus 1 ivllHG~~~~~~~-------------w~~~~~---~l~~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~~~ys 63 (346)
|||+||+++++.. |+.++. .|.. .+|+||++|+||+ |.|+.+... .+............|+
T Consensus 51 vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~-~~~~~~~~~~~~~~~~ 128 (379)
T PRK00175 51 VLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSI-NPDTGKPYGSDFPVIT 128 (379)
T ss_pred EEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCC-CCCCCCcccCCCCcCC
Confidence 6999999999985 666542 3322 3689999999993 545432110 0000000000112689
Q ss_pred hHHHHHHHHHHHHHhcccc-eEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 64 MAFSVLATLYFIDILAAEK-AILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 64 ~~~~~~~~~~ll~~l~~~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+...+.++.++++++++++ ++||||||||++++.+|.++|++|+++|++++.
T Consensus 129 ~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 129 IRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 9999999999999999999 599999999999999999999999999999864
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=1.4e-26 Score=209.38 Aligned_cols=105 Identities=19% Similarity=0.117 Sum_probs=87.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh--
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-- 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l-- 78 (346)
|||+||++++...|..++..|.+ .||+|+++|+||||.|+.+... ......+++...+.++.++++++
T Consensus 57 vll~HG~~~~~~~y~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~---------~~~~~~~~~~~~~~d~~~~~~~~~~ 126 (330)
T PRK10749 57 VVICPGRIESYVKYAELAYDLFH-LGYDVLIIDHRGQGRSGRLLDD---------PHRGHVERFNDYVDDLAAFWQQEIQ 126 (330)
T ss_pred EEEECCccchHHHHHHHHHHHHH-CCCeEEEEcCCCCCCCCCCCCC---------CCcCccccHHHHHHHHHHHHHHHHh
Confidence 68999999999999898888876 5899999999999999753210 00112357788888898998886
Q ss_pred --cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 79 --AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 79 --~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+..+++|+||||||++++.+|.++|++|+++|+++|.
T Consensus 127 ~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~ 165 (330)
T PRK10749 127 PGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPM 165 (330)
T ss_pred cCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECch
Confidence 6689999999999999999999999999999999874
No 34
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.1e-26 Score=208.61 Aligned_cols=100 Identities=20% Similarity=0.347 Sum_probs=80.1
Q ss_pred CEeeccCCCCc-cchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~-~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|||+||++.+. +.|......|.+ .||+|+++|+||||.|+... ...++++..++|+.++++.++
T Consensus 62 VvllHG~~~~~~~~~~~~~~~L~~-~Gy~V~~~D~rGhG~S~~~~--------------~~~~~~~~~~~D~~~~i~~l~ 126 (330)
T PLN02298 62 IFMVHGYGNDISWTFQSTAIFLAQ-MGFACFALDLEGHGRSEGLR--------------AYVPNVDLVVEDCLSFFNSVK 126 (330)
T ss_pred EEEEcCCCCCcceehhHHHHHHHh-CCCEEEEecCCCCCCCCCcc--------------ccCCCHHHHHHHHHHHHHHHH
Confidence 69999998765 345555667765 48999999999999986321 112356677888888888875
Q ss_pred c------cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 80 A------EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 80 ~------~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
. .+++|+||||||++++.++.++|++|+++|+++|.
T Consensus 127 ~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 168 (330)
T PLN02298 127 QREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPM 168 (330)
T ss_pred hcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccc
Confidence 4 36999999999999999999999999999999874
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=2.6e-26 Score=198.22 Aligned_cols=100 Identities=29% Similarity=0.423 Sum_probs=86.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH-HHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA-TLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~-~~~ll~~l~ 79 (346)
|||+||++++...|..+.+.|. .+|+|+++|+||||.|+.+.. ...+++...+.+ +..+++.++
T Consensus 4 vv~~hG~~~~~~~~~~~~~~L~--~~~~v~~~d~~g~G~s~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 68 (251)
T TIGR03695 4 LVFLHGFLGSGADWQALIELLG--PHFRCLAIDLPGHGSSQSPDE-------------IERYDFEEAAQDILATLLDQLG 68 (251)
T ss_pred EEEEcCCCCchhhHHHHHHHhc--ccCeEEEEcCCCCCCCCCCCc-------------cChhhHHHHHHHHHHHHHHHcC
Confidence 6899999999999999999997 379999999999999964311 124677777777 677888889
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.++++++||||||++++.+|.++|++|++++++++.
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 999999999999999999999999999999999864
No 36
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=6.3e-26 Score=239.25 Aligned_cols=263 Identities=21% Similarity=0.295 Sum_probs=159.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||||||+++++..|..++..|.+ +|+||++|+||||.|+...... .......|+++..+.++.++++++++
T Consensus 1374 vVllHG~~~s~~~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~-------~~~~~~~~si~~~a~~l~~ll~~l~~ 1444 (1655)
T PLN02980 1374 VLFLHGFLGTGEDWIPIMKAISG--SARCISIDLPGHGGSKIQNHAK-------ETQTEPTLSVELVADLLYKLIEHITP 1444 (1655)
T ss_pred EEEECCCCCCHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccc-------cccccccCCHHHHHHHHHHHHHHhCC
Confidence 68999999999999999998875 4899999999999996432100 00011257888888889999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
++++|+||||||++++.+|.++|++|+++|++++. |...... . ..+... ....
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~---p~~~~~~------------------~----~~~~~~--~~~~ 1497 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS---PGLKDEV------------------A----RKIRSA--KDDS 1497 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC---CccCchH------------------H----HHHHhh--hhhH
Confidence 99999999999999999999999999999999753 1100000 0 000000 0000
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
....+.. .....+...++...+ + . ...........+...... ....+.
T Consensus 1498 ~~~~l~~------~g~~~~~~~~~~~~~---~-------------~---------~~~~~~~~~~~~~~~~~~-~~~~~~ 1545 (1655)
T PLN02980 1498 RARMLID------HGLEIFLENWYSGEL---W-------------K---------SLRNHPHFNKIVASRLLH-KDVPSL 1545 (1655)
T ss_pred HHHHHHh------hhHHHHHHHhccHHH---h-------------h---------hhccCHHHHHHHHHHHhc-CCHHHH
Confidence 0000000 000000000000000 0 0 000000000000000000 000000
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCC------------CeEEEecCC
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG------------STFEVIKNC 308 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~------------~~~~~i~~~ 308 (346)
...+.. + . .....+....+.++++|+|+|+|++|.+++ ..++++.+.+|+ +++++++++
T Consensus 1546 ~~~l~~----~-~---~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~a 1616 (1655)
T PLN02980 1546 AKLLSD----L-S---IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNC 1616 (1655)
T ss_pred HHHHHH----h-h---hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCC
Confidence 000000 0 0 001223445788999999999999999875 567778887776 479999999
Q ss_pred CCCCchhCHHHHHHHHHHHHHHHhCCCCcccc
Q 019089 309 GHVPQEEKVEEFVSIVARFLQRAFGYSESEGK 340 (346)
Q Consensus 309 GH~~~~e~pe~~~~~i~~fl~~~~~~~~~~~~ 340 (346)
||++++|+|++|++.|.+|+.+.....+..+.
T Consensus 1617 GH~~~lE~Pe~f~~~I~~FL~~~~~~~~~~~~ 1648 (1655)
T PLN02980 1617 GHAVHLENPLPVIRALRKFLTRLHNSSTPGEL 1648 (1655)
T ss_pred CCchHHHCHHHHHHHHHHHHHhccccCCCchh
Confidence 99999999999999999999987655555443
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=7.3e-26 Score=208.43 Aligned_cols=99 Identities=42% Similarity=0.598 Sum_probs=87.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++++...|..+...|.+ +|+|+++|+||||.|... ...+++...+.++.++++.++.
T Consensus 134 vl~~HG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 196 (371)
T PRK14875 134 VVLIHGFGGDLNNWLFNHAALAA--GRPVIALDLPGHGASSKA---------------VGAGSLDELAAAVLAFLDALGI 196 (371)
T ss_pred EEEECCCCCccchHHHHHHHHhc--CCEEEEEcCCCCCCCCCC---------------CCCCCHHHHHHHHHHHHHhcCC
Confidence 68999999999999999988875 489999999999998532 1245677888888999999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++++|+||||||++++.+|.++|++|+++|+++|..
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAG 232 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCC
Confidence 999999999999999999999999999999998753
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=2.6e-25 Score=204.05 Aligned_cols=242 Identities=17% Similarity=0.287 Sum_probs=148.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++++...|..+++.|.+ .||+|+++|+||||.|+... ...++++....|+.++++.+..
T Consensus 139 Vl~lHG~~~~~~~~~~~a~~L~~-~Gy~V~~~D~rGhG~S~~~~--------------~~~~~~~~~~~Dl~~~l~~l~~ 203 (395)
T PLN02652 139 LIIIHGLNEHSGRYLHFAKQLTS-CGFGVYAMDWIGHGGSDGLH--------------GYVPSLDYVVEDTEAFLEKIRS 203 (395)
T ss_pred EEEECCchHHHHHHHHHHHHHHH-CCCEEEEeCCCCCCCCCCCC--------------CCCcCHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999976 48999999999999986421 1123556667778888887753
Q ss_pred ----cceEEEEeChhHHHHHHHHhhch---hhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhH
Q 019089 81 ----EKAILVGHSAGALVAVNSYFEAP---ERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLK 153 (346)
Q Consensus 81 ----~~~~lvGhS~GG~ia~~~a~~~p---~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (346)
.+++|+||||||.+++.++ .+| ++|+++|+.+|...-.. . .++..
T Consensus 204 ~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l~~~~---------------------~------~~~~~ 255 (395)
T PLN02652 204 ENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPALRVKP---------------------A------HPIVG 255 (395)
T ss_pred hCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECccccccc---------------------c------hHHHH
Confidence 3699999999999999766 466 48999999986421000 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcC
Q 019089 154 VYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK 233 (346)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
.+... ......+.. ... .. ......... .......+..
T Consensus 256 ---~~~~l------------------~~~~~p~~~---~~~-------------~~---~~~~~~s~~--~~~~~~~~~d 293 (395)
T PLN02652 256 ---AVAPI------------------FSLVAPRFQ---FKG-------------AN---KRGIPVSRD--PAALLAKYSD 293 (395)
T ss_pred ---HHHHH------------------HHHhCCCCc---ccC-------------cc---cccCCcCCC--HHHHHHHhcC
Confidence 00000 000000000 000 00 000000000 0011111112
Q ss_pred cccccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCC--CeEEEecCCCCC
Q 019089 234 PLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHV 311 (346)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~ 311 (346)
+....++.+...... +.. ........+.+|++|+|+|+|++|.++|++.++++++.+++ .+++++++++|.
T Consensus 294 p~~~~g~i~~~~~~~--~~~-----~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~ 366 (395)
T PLN02652 294 PLVYTGPIRVRTGHE--ILR-----ISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHD 366 (395)
T ss_pred CCcccCCchHHHHHH--HHH-----HHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEE
Confidence 221112111100000 000 00112346778999999999999999999999999887654 789999999999
Q ss_pred Cchh-CHHHHHHHHHHHHHHHhCC
Q 019089 312 PQEE-KVEEFVSIVARFLQRAFGY 334 (346)
Q Consensus 312 ~~~e-~pe~~~~~i~~fl~~~~~~ 334 (346)
++.| +++++++.|.+|+...++.
T Consensus 367 l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 367 LLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred eccCCCHHHHHHHHHHHHHHHhhc
Confidence 9777 8999999999999987653
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.93 E-value=6.7e-24 Score=190.12 Aligned_cols=102 Identities=20% Similarity=0.174 Sum_probs=81.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||++++...| .+...+.. .+|+||++|+||||.|+.+.. ...++....+.++..+++++++
T Consensus 30 lvllHG~~~~~~~~-~~~~~~~~-~~~~vi~~D~~G~G~S~~~~~-------------~~~~~~~~~~~dl~~l~~~l~~ 94 (306)
T TIGR01249 30 VVFLHGGPGSGTDP-GCRRFFDP-ETYRIVLFDQRGCGKSTPHAC-------------LEENTTWDLVADIEKLREKLGI 94 (306)
T ss_pred EEEECCCCCCCCCH-HHHhccCc-cCCEEEEECCCCCCCCCCCCC-------------cccCCHHHHHHHHHHHHHHcCC
Confidence 68999998886654 33333432 368999999999999964211 1235666778888899999999
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 117 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~ 117 (346)
++++++||||||++++.++.++|++|+++|++++...
T Consensus 95 ~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 95 KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 9999999999999999999999999999999987543
No 40
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=8.4e-24 Score=193.37 Aligned_cols=291 Identities=14% Similarity=0.147 Sum_probs=154.7
Q ss_pred CEeeccCCCCccc-------------hhhhHHH--HhhhCCCeEEEEcCCCCCCCCCCC----CCCCCCCCCCC--CCCC
Q 019089 1 MVLFHGFGASVFS-------------WNRAMKP--LAKTTSSKVLAFDRPAFGLTSRVF----PFQQPTPDTEN--KKPL 59 (346)
Q Consensus 1 ivllHG~~~~~~~-------------w~~~~~~--l~~~~~~~via~Dl~G~G~S~~~~----~~~~~~~~~~~--~~~~ 59 (346)
||++|+++++++. |+.++.+ ......|.||++|..|-|.|+.|. .+.++.|.+.. ....
T Consensus 59 vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~f 138 (389)
T PRK06765 59 ILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDF 138 (389)
T ss_pred EEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCC
Confidence 6889999997632 6655432 111235889999999988754321 00011111110 0012
Q ss_pred CCchhHHHHHHHHHHHHHhcccceE-EEEeChhHHHHHHHHhhchhhhhhheeecccccc-ccc-ccccc-ccCCCCCCc
Q 019089 60 NPYSMAFSVLATLYFIDILAAEKAI-LVGHSAGALVAVNSYFEAPERVAALILIAPAILA-PRL-IQKVD-EANPLGRNE 135 (346)
Q Consensus 60 ~~ys~~~~~~~~~~ll~~l~~~~~~-lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~-p~~-~~~~~-~~~~~~~~~ 135 (346)
..|++.+.+.++..+++++++++++ ||||||||++++.+|.++|++|+++|++++.... +.. ..-.. ...... ..
T Consensus 139 P~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~-~d 217 (389)
T PRK06765 139 PVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIR-LD 217 (389)
T ss_pred CcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHH-hC
Confidence 2488999999999999999999986 9999999999999999999999999999764321 110 00000 000000 00
Q ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHH--HH
Q 019089 136 QTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLA--AV 213 (346)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 213 (346)
... ..........+. + ++.. .......++++. +.+.+++... ..
T Consensus 218 p~~-~~G~y~~~~~p~-~---------------------Gl~~-----a~~~~~~~~~s~------~~~~~~f~r~~~~~ 263 (389)
T PRK06765 218 PNW-KGGKYYGEEQPM-K---------------------GLTL-----ALRMMTMNAFDE------HFYETTFPRNASIE 263 (389)
T ss_pred CCC-CCCCCCCCCCch-H---------------------HHHH-----HHHHHHHHcCCH------HHHHHHcCcCcccc
Confidence 000 000000000000 0 0000 000000000000 0000000000 00
Q ss_pred Hhhhc--CChHhHHHHHHH----hcCcccccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcCh
Q 019089 214 RRAWY--NSKEVAEHVIEG----YTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPS 287 (346)
Q Consensus 214 ~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~ 287 (346)
...+. ......+.++.. +...+- ...++....++..........+....|.+|++|+|+|+|++|.++|+
T Consensus 264 ~~~~~~~~~~~~~e~yl~~~~~~~~~~~D----an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~ 339 (389)
T PRK06765 264 VDPYEKVSTLTSFEKEINKATYRRAELVD----ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPP 339 (389)
T ss_pred ccccccccchhhHHHHHHHHHHHhhhccC----hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCH
Confidence 00000 000000111111 111110 01122211222111111112245678889999999999999999999
Q ss_pred HHHHHHHHhCC----CCeEEEecC-CCCCCchhCHHHHHHHHHHHHHH
Q 019089 288 WNAERLSRAIP----GSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 288 ~~~~~~~~~~p----~~~~~~i~~-~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
+.++.+.+.+| +++++++++ +||++++|+|++|++.|.+|+++
T Consensus 340 ~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 340 RYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99999999886 688999986 89999999999999999999865
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=2.3e-24 Score=182.32 Aligned_cols=243 Identities=23% Similarity=0.341 Sum_probs=154.8
Q ss_pred CEeeccCCCCc-cchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~-~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|+++||+++.+ +.|...+..|+. .||-|+++|++|||.|+..... --+++..++|+..+.+...
T Consensus 57 v~~~HG~g~~~s~~~~~~a~~l~~-~g~~v~a~D~~GhG~SdGl~~y--------------i~~~d~~v~D~~~~~~~i~ 121 (313)
T KOG1455|consen 57 VFLCHGYGEHSSWRYQSTAKRLAK-SGFAVYAIDYEGHGRSDGLHAY--------------VPSFDLVVDDVISFFDSIK 121 (313)
T ss_pred EEEEcCCcccchhhHHHHHHHHHh-CCCeEEEeeccCCCcCCCCccc--------------CCcHHHHHHHHHHHHHHHh
Confidence 68999999997 677778888887 5899999999999999853321 1246677888888888643
Q ss_pred ------ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhH
Q 019089 80 ------AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLK 153 (346)
Q Consensus 80 ------~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (346)
..+..|.||||||.|++.++.++|+...++|+++|....... .++ ..+...
T Consensus 122 ~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~----------------------~kp-~p~v~~ 178 (313)
T KOG1455|consen 122 EREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISED----------------------TKP-HPPVIS 178 (313)
T ss_pred hccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCc----------------------cCC-CcHHHH
Confidence 246899999999999999999999999999999986432110 000 011111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcC
Q 019089 154 VYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTK 233 (346)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
+...+. +.++. ++.. . .+...+. .+.++ ......+.+
T Consensus 179 ~l~~l~--------------------------~liP~-wk~v-p---~~d~~~~--------~~kdp----~~r~~~~~n 215 (313)
T KOG1455|consen 179 ILTLLS--------------------------KLIPT-WKIV-P---TKDIIDV--------AFKDP----EKRKILRSD 215 (313)
T ss_pred HHHHHH--------------------------HhCCc-eeec-C---Ccccccc--------ccCCH----HHHHHhhcC
Confidence 111110 00000 0000 0 0000000 00000 001111233
Q ss_pred cccccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCC--CCeEEEecCCCCC
Q 019089 234 PLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHV 311 (346)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~GH~ 311 (346)
|+++.+..+.-..+.. + ....+..+.+.++++|.+++||+.|.++.++.++.+.+..+ +.++++|||+-|.
T Consensus 216 pl~y~g~pRl~T~~El--L-----r~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~ 288 (313)
T KOG1455|consen 216 PLCYTGKPRLKTAYEL--L-----RVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHS 288 (313)
T ss_pred CceecCCccHHHHHHH--H-----HHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHH
Confidence 5555444332111110 0 01235567889999999999999999999999999999874 5789999999998
Q ss_pred Cch----hCHHHHHHHHHHHHHHH
Q 019089 312 PQE----EKVEEFVSIVARFLQRA 331 (346)
Q Consensus 312 ~~~----e~pe~~~~~i~~fl~~~ 331 (346)
.+. |+-+.|...|.+|+.+.
T Consensus 289 Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 289 LLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred hhcCCCchhHHHHHHHHHHHHHhc
Confidence 886 33356777788998764
No 42
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.92 E-value=2.7e-24 Score=184.87 Aligned_cols=245 Identities=21% Similarity=0.324 Sum_probs=152.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA- 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~- 79 (346)
++++||+-++..+|+.+...|++..+.+|+++|+|-||.|.... .++....+.|+..||+..+
T Consensus 55 ~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~----------------~h~~~~ma~dv~~Fi~~v~~ 118 (315)
T KOG2382|consen 55 AIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT----------------VHNYEAMAEDVKLFIDGVGG 118 (315)
T ss_pred eEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc----------------ccCHHHHHHHHHHHHHHccc
Confidence 58999999999999999999988778899999999999986421 3445677888889999874
Q ss_pred ---ccceEEEEeChhH-HHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHH
Q 019089 80 ---AEKAILVGHSAGA-LVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 155 (346)
Q Consensus 80 ---~~~~~lvGhS~GG-~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
..+++++|||||| .+++..+..+|+++..+++++- +|..... . . ..+...+
T Consensus 119 ~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~---sP~~~~~-------~--~-------------~e~~e~i 173 (315)
T KOG2382|consen 119 STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDI---SPGGVGR-------S--Y-------------GEYRELI 173 (315)
T ss_pred ccccCCceecccCcchHHHHHHHHHhcCcccceeEEEec---CCccCCc-------c--c-------------chHHHHH
Confidence 6789999999999 7777777889999999999973 2210000 0 0 0011111
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhc---
Q 019089 156 TILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYT--- 232 (346)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 232 (346)
..+......... .+........+.... .++.+.+.+..++.
T Consensus 174 ~~m~~~d~~~~~-----~~~rke~~~~l~~~~-------------------------------~d~~~~~fi~~nl~~~~ 217 (315)
T KOG2382|consen 174 KAMIQLDLSIGV-----SRGRKEALKSLIEVG-------------------------------FDNLVRQFILTNLKKSP 217 (315)
T ss_pred HHHHhccccccc-----cccHHHHHHHHHHHh-------------------------------cchHHHHHHHHhcCcCC
Confidence 111000000000 000000000000000 00000011111111
Q ss_pred ------CcccccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEec
Q 019089 233 ------KPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIK 306 (346)
Q Consensus 233 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~ 306 (346)
+..+..+....+.++. .... + .+. .. ...+.||++|.|.++..++.++-..+.+.+|++++.+++
T Consensus 218 ~~~s~~w~~nl~~i~~~~~~~~----~~s~-~--~~l-~~-~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld 288 (315)
T KOG2382|consen 218 SDGSFLWRVNLDSIASLLDEYE----ILSY-W--ADL-ED-GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELD 288 (315)
T ss_pred CCCceEEEeCHHHHHHHHHHHH----hhcc-c--ccc-cc-cccccceeEEecCCCCCcChhHHHHHHHhccchheeecc
Confidence 0000001111111110 0000 0 011 11 566899999999999999999999999999999999999
Q ss_pred CCCCCCchhCHHHHHHHHHHHHHHH
Q 019089 307 NCGHVPQEEKVEEFVSIVARFLQRA 331 (346)
Q Consensus 307 ~~GH~~~~e~pe~~~~~i~~fl~~~ 331 (346)
++|||+|.|+|++|++.|.+|+.+.
T Consensus 289 ~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 289 EAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999999999999998764
No 43
>PLN02511 hydrolase
Probab=99.92 E-value=8.3e-24 Score=194.79 Aligned_cols=98 Identities=16% Similarity=0.178 Sum_probs=73.3
Q ss_pred CEeeccCCCCccc-hh-hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFS-WN-RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~-w~-~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
|||+||+++++.. |. ..+..+.+ .||+|+++|+||||.|..... .+.......|+.++++++
T Consensus 103 vvllHG~~g~s~~~y~~~~~~~~~~-~g~~vv~~d~rG~G~s~~~~~---------------~~~~~~~~~Dl~~~i~~l 166 (388)
T PLN02511 103 LILLPGLTGGSDDSYVRHMLLRARS-KGWRVVVFNSRGCADSPVTTP---------------QFYSASFTGDLRQVVDHV 166 (388)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHH-CCCEEEEEecCCCCCCCCCCc---------------CEEcCCchHHHHHHHHHH
Confidence 6899999877643 54 45555544 589999999999999864211 111123345666777777
Q ss_pred cc----cceEEEEeChhHHHHHHHHhhchhh--hhhheeecc
Q 019089 79 AA----EKAILVGHSAGALVAVNSYFEAPER--VAALILIAP 114 (346)
Q Consensus 79 ~~----~~~~lvGhS~GG~ia~~~a~~~p~~--v~~lvli~p 114 (346)
+. .++++|||||||++++.++.++|++ |++++++++
T Consensus 167 ~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 167 AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 65 5899999999999999999999988 888888865
No 44
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=1.3e-22 Score=173.58 Aligned_cols=78 Identities=31% Similarity=0.443 Sum_probs=67.9
Q ss_pred CeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcccceEEEEeChhHHHHHHHHhhchhhh
Q 019089 27 SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERV 106 (346)
Q Consensus 27 ~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v 106 (346)
|+||++|+||+|.|+... ......|+..+.+.++..+++.++.+++++|||||||++++.+|.++|++|
T Consensus 1 f~vi~~d~rG~g~S~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW-----------DPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERV 69 (230)
T ss_dssp EEEEEEECTTSTTSSSCC-----------GSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGE
T ss_pred CEEEEEeCCCCCCCCCCc-----------cCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhh
Confidence 589999999999997300 011346888899999999999999999999999999999999999999999
Q ss_pred hhheeeccc
Q 019089 107 AALILIAPA 115 (346)
Q Consensus 107 ~~lvli~p~ 115 (346)
+++|+++++
T Consensus 70 ~~lvl~~~~ 78 (230)
T PF00561_consen 70 KKLVLISPP 78 (230)
T ss_dssp EEEEEESES
T ss_pred cCcEEEeee
Confidence 999999874
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=1.9e-23 Score=203.58 Aligned_cols=98 Identities=22% Similarity=0.327 Sum_probs=81.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|||+||+++++..|+.+++.|. .+|+|+++|+||||.|+.+. ....|++...++++.++++.++.
T Consensus 28 ivllHG~~~~~~~w~~~~~~L~--~~~~Vi~~D~~G~G~S~~~~-------------~~~~~~~~~~a~dl~~~i~~l~~ 92 (582)
T PRK05855 28 VVLVHGYPDNHEVWDGVAPLLA--DRFRVVAYDVRGAGRSSAPK-------------RTAAYTLARLADDFAAVIDAVSP 92 (582)
T ss_pred EEEEcCCCchHHHHHHHHHHhh--cceEEEEecCCCCCCCCCCC-------------cccccCHHHHHHHHHHHHHHhCC
Confidence 6999999999999999999885 36999999999999997432 12358899999999999999998
Q ss_pred cc-eEEEEeChhHHHHHHHHhh--chhhhhhheeec
Q 019089 81 EK-AILVGHSAGALVAVNSYFE--APERVAALILIA 113 (346)
Q Consensus 81 ~~-~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~ 113 (346)
++ ++|+||||||++++.++.+ .|+++..++.++
T Consensus 93 ~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 93 DRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred CCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 76 9999999999999887765 355666655554
No 46
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.89 E-value=1.2e-22 Score=160.91 Aligned_cols=231 Identities=18% Similarity=0.244 Sum_probs=151.9
Q ss_pred CEeecc-CCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHG-FGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG-~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|+++.| +|+.+..|..++..|.+..-+.+|++|-||||.|-.|. + + ...--+..++++.+.+|+.|+
T Consensus 45 iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~-R--------k---f~~~ff~~Da~~avdLM~aLk 112 (277)
T KOG2984|consen 45 ILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE-R--------K---FEVQFFMKDAEYAVDLMEALK 112 (277)
T ss_pred eEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc-c--------c---chHHHHHHhHHHHHHHHHHhC
Confidence 578888 66677889888888766444799999999999885331 0 1 111124566777889999999
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHH
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILS 159 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (346)
.+++.|+|+|=||..++..|+++++.|.++|+.+...+-.- + . ...
T Consensus 113 ~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~-----~----------------------~--~ma----- 158 (277)
T KOG2984|consen 113 LEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH-----L----------------------G--AMA----- 158 (277)
T ss_pred CCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecc-----h----------------------h--HHH-----
Confidence 99999999999999999999999999999999875322100 0 0 000
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccc
Q 019089 160 MFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKG 239 (346)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
.+.+..+.+|..+.... +++-.+...++..|... . +.++.+.. ++. |
T Consensus 159 ------~kgiRdv~kWs~r~R~P---------------------~e~~Yg~e~f~~~wa~w---v-D~v~qf~~-~~d-G 205 (277)
T KOG2984|consen 159 ------FKGIRDVNKWSARGRQP---------------------YEDHYGPETFRTQWAAW---V-DVVDQFHS-FCD-G 205 (277)
T ss_pred ------HhchHHHhhhhhhhcch---------------------HHHhcCHHHHHHHHHHH---H-HHHHHHhh-cCC-C
Confidence 01111122222111000 00000000011111110 0 01111100 000 0
Q ss_pred hhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHH
Q 019089 240 WDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEE 319 (346)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~ 319 (346)
+. -.-.+.+++||+++++|+.|++++..+.-.+.++.+.+++.+.|.++|.+++--+++
T Consensus 206 --------------------~f-Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~e 264 (277)
T KOG2984|consen 206 --------------------RF-CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKE 264 (277)
T ss_pred --------------------ch-HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHH
Confidence 00 112567899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 019089 320 FVSIVARFLQRA 331 (346)
Q Consensus 320 ~~~~i~~fl~~~ 331 (346)
|++.+.+|+++.
T Consensus 265 Fnklv~dFl~~~ 276 (277)
T KOG2984|consen 265 FNKLVLDFLKST 276 (277)
T ss_pred HHHHHHHHHhcc
Confidence 999999999753
No 47
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.88 E-value=2.4e-21 Score=171.38 Aligned_cols=101 Identities=30% Similarity=0.378 Sum_probs=85.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCC-CCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSR-VFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~-~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
||++||++.++.-|.+++..|.. .||.|+++|+||||.|.. ... . .=++..+..|+.++++...
T Consensus 37 Vvl~HG~~Eh~~ry~~la~~l~~-~G~~V~~~D~RGhG~S~r~~rg------------~--~~~f~~~~~dl~~~~~~~~ 101 (298)
T COG2267 37 VVLVHGLGEHSGRYEELADDLAA-RGFDVYALDLRGHGRSPRGQRG------------H--VDSFADYVDDLDAFVETIA 101 (298)
T ss_pred EEEecCchHHHHHHHHHHHHHHh-CCCEEEEecCCCCCCCCCCCcC------------C--chhHHHHHHHHHHHHHHHh
Confidence 68999999999999999999987 589999999999999962 111 0 1126677778888888775
Q ss_pred ----ccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 80 ----AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 80 ----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
..+++|+||||||.|++.++.+++.+|.++||.+|..
T Consensus 102 ~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~ 142 (298)
T COG2267 102 EPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPAL 142 (298)
T ss_pred ccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccc
Confidence 3679999999999999999999999999999998753
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=5.9e-21 Score=172.26 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=55.7
Q ss_pred hhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCH----H-HHHHHHHHHHHHHh
Q 019089 265 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV----E-EFVSIVARFLQRAF 332 (346)
Q Consensus 265 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~p----e-~~~~~i~~fl~~~~ 332 (346)
..+.++++|+++|+|++|.+++++....+.+..|+.++.+++++||++++|.. + ..-+.+.+|+....
T Consensus 249 ~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 249 PLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 46788999999999999999998888888788899999999999999999853 3 34445678876543
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.87 E-value=9.3e-21 Score=171.16 Aligned_cols=59 Identities=14% Similarity=0.279 Sum_probs=52.9
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhC--CCCeEEEecCCCCCCchhC-HHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCGHVPQEEK-VEEFVSIVARFLQ 329 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~--p~~~~~~i~~~GH~~~~e~-pe~~~~~i~~fl~ 329 (346)
++|+|+|+|++|.+++++.++.+.+.. ++.++.++++++|.++.|. ++++.+.|.+|+.
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 799999999999999999888887765 5788999999999999985 7899999999985
No 50
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.87 E-value=1.1e-20 Score=152.49 Aligned_cols=222 Identities=18% Similarity=0.232 Sum_probs=141.9
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
+||||||.++..-.+.....|.+ .||.|+||-+||||...... ...++-.+-..+.+.-..+...+-
T Consensus 18 VLllHGFTGt~~Dvr~Lgr~L~e-~GyTv~aP~ypGHG~~~e~f------------l~t~~~DW~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 18 VLLLHGFTGTPRDVRMLGRYLNE-NGYTVYAPRYPGHGTLPEDF------------LKTTPRDWWEDVEDGYRDLKEAGY 84 (243)
T ss_pred EEEEeccCCCcHHHHHHHHHHHH-CCceEecCCCCCCCCCHHHH------------hcCCHHHHHHHHHHHHHHHHHcCC
Confidence 58999999999999888888877 58999999999999753211 111122333445555566666778
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSM 160 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (346)
+.+.++|-||||.+++.+|..+| ++++|.++++.- ... + ..+ +..+..
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~-~k~-----~---------------------~~i---ie~~l~ 132 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVN-VKS-----W---------------------RII---IEGLLE 132 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcc-ccc-----c---------------------hhh---hHHHHH
Confidence 99999999999999999999998 999999986431 100 0 000 001111
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccccch
Q 019089 161 FLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGW 240 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (346)
+. +.++++.. .+ .+..+.....|.. .+
T Consensus 133 y~-------------------~~~kk~e~----------------------------k~-~e~~~~e~~~~~~-----~~ 159 (243)
T COG1647 133 YF-------------------RNAKKYEG----------------------------KD-QEQIDKEMKSYKD-----TP 159 (243)
T ss_pred HH-------------------HHhhhccC----------------------------CC-HHHHHHHHHHhhc-----ch
Confidence 10 00000000 00 0000111111110 00
Q ss_pred hHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCC--CCeEEEecCCCCCCch-hCH
Q 019089 241 DRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQE-EKV 317 (346)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p--~~~~~~i~~~GH~~~~-e~p 317 (346)
.....++ ..++ .+....+..|..|++++.|.+|.++|.+.+..+....- +.++++++++||.+-. ++-
T Consensus 160 ~~~~~~~-~~~i--------~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Er 230 (243)
T COG1647 160 MTTTAQL-KKLI--------KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKER 230 (243)
T ss_pred HHHHHHH-HHHH--------HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhH
Confidence 1111111 0111 12334678899999999999999999999999988763 4689999999997766 566
Q ss_pred HHHHHHHHHHHH
Q 019089 318 EEFVSIVARFLQ 329 (346)
Q Consensus 318 e~~~~~i~~fl~ 329 (346)
|.+.+.|.+||+
T Consensus 231 d~v~e~V~~FL~ 242 (243)
T COG1647 231 DQVEEDVITFLE 242 (243)
T ss_pred HHHHHHHHHHhh
Confidence 899999999986
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.86 E-value=3e-20 Score=163.61 Aligned_cols=97 Identities=21% Similarity=0.155 Sum_probs=70.3
Q ss_pred CEeeccCCC----CccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGA----SVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~----~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
+|++||.+. +...|..+++.|.+ .||+|+++|+||||.|... .+++.....|+.+.++
T Consensus 29 vv~i~gg~~~~~g~~~~~~~la~~l~~-~G~~v~~~Dl~G~G~S~~~-----------------~~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 29 VLIVVGGPQYRVGSHRQFVLLARRLAE-AGFPVLRFDYRGMGDSEGE-----------------NLGFEGIDADIAAAID 90 (274)
T ss_pred EEEEeCCccccCCchhHHHHHHHHHHH-CCCEEEEeCCCCCCCCCCC-----------------CCCHHHHHHHHHHHHH
Confidence 477888664 33345556777766 4899999999999998531 1233344455555555
Q ss_pred Hh-----cccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 77 IL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 77 ~l-----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
.+ +.++++++||||||++++.+|.. +++|+++|+++|..
T Consensus 91 ~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 91 AFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 54 56789999999999999988764 57899999998753
No 52
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.86 E-value=3e-20 Score=172.06 Aligned_cols=212 Identities=17% Similarity=0.215 Sum_probs=132.2
Q ss_pred CEeeccCCCCc-cchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh-
Q 019089 1 MVLFHGFGASV-FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL- 78 (346)
Q Consensus 1 ivllHG~~~~~-~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l- 78 (346)
||++||+.+.. ..|..+...|.+ .||.|+++|+||||.|..... .+.......++++++...
T Consensus 197 Vli~gG~~~~~~~~~~~~~~~La~-~Gy~vl~~D~pG~G~s~~~~~---------------~~d~~~~~~avld~l~~~~ 260 (414)
T PRK05077 197 VLVCGGLDSLQTDYYRLFRDYLAP-RGIAMLTIDMPSVGFSSKWKL---------------TQDSSLLHQAVLNALPNVP 260 (414)
T ss_pred EEEeCCcccchhhhHHHHHHHHHh-CCCEEEEECCCCCCCCCCCCc---------------cccHHHHHHHHHHHHHhCc
Confidence 35556666653 578777788876 589999999999999853210 011222233444555543
Q ss_pred --cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHH
Q 019089 79 --AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYT 156 (346)
Q Consensus 79 --~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (346)
+.+++.++||||||++++.+|..+|++|+++|+++|+.. ..... . ....
T Consensus 261 ~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~-~~~~~------------------~------~~~~---- 311 (414)
T PRK05077 261 WVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH-TLLTD------------------P------KRQQ---- 311 (414)
T ss_pred ccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc-hhhcc------------------h------hhhh----
Confidence 668899999999999999999999999999999986531 00000 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCccc
Q 019089 157 ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLR 236 (346)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (346)
. .... +...+. ..++. .......+... +.. +
T Consensus 312 ~------------------~p~~----~~~~la----------------~~lg~-----~~~~~~~l~~~-l~~----~- 342 (414)
T PRK05077 312 Q------------------VPEM----YLDVLA----------------SRLGM-----HDASDEALRVE-LNR----Y- 342 (414)
T ss_pred h------------------chHH----HHHHHH----------------HHhCC-----CCCChHHHHHH-hhh----c-
Confidence 0 0000 000000 00000 00000000000 000 0
Q ss_pred ccchhHHHHHHHHHHhhcccCCCChhHHhhc-ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchh
Q 019089 237 VKGWDRALVEFTAALLIDNESKMNPPLAKRL-HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEE 315 (346)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e 315 (346)
.......+ .++++|+|+|+|++|.++|.+.++.+++..|++++.+++++ ++.+
T Consensus 343 -----------------------sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e 396 (414)
T PRK05077 343 -----------------------SLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYR 396 (414)
T ss_pred -----------------------cchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccC
Confidence 00000011 46889999999999999999999999999999999999986 6778
Q ss_pred CHHHHHHHHHHHHHHHh
Q 019089 316 KVEEFVSIVARFLQRAF 332 (346)
Q Consensus 316 ~pe~~~~~i~~fl~~~~ 332 (346)
.|+++++.+.+|+.+.+
T Consensus 397 ~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 397 NFDKALQEISDWLEDRL 413 (414)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998754
No 53
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.84 E-value=1.1e-19 Score=170.74 Aligned_cols=101 Identities=9% Similarity=0.076 Sum_probs=80.7
Q ss_pred CEeeccCCCCccchh-----hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWN-----RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~~~~w~-----~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
||++||+....++|+ .++..|.+ .||+|+++|+||+|.|.... ..+.|..+....++.+++
T Consensus 191 lLiVp~~i~k~yilDL~p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~-------------~~ddY~~~~i~~al~~v~ 256 (532)
T TIGR01838 191 LLIVPPWINKYYILDLRPQNSLVRWLVE-QGHTVFVISWRNPDASQADK-------------TFDDYIRDGVIAALEVVE 256 (532)
T ss_pred EEEECcccccceeeecccchHHHHHHHH-CCcEEEEEECCCCCcccccC-------------ChhhhHHHHHHHHHHHHH
Confidence 689999999999997 67888877 48999999999999875321 234576666666677778
Q ss_pred HHhcccceEEEEeChhHHHH---H-HHHhhc-hhhhhhheeeccc
Q 019089 76 DILAAEKAILVGHSAGALVA---V-NSYFEA-PERVAALILIAPA 115 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia---~-~~a~~~-p~~v~~lvli~p~ 115 (346)
+.++.+++++|||||||.++ + .+++.+ |++|+++++++++
T Consensus 257 ~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~ 301 (532)
T TIGR01838 257 AITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTL 301 (532)
T ss_pred HhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecC
Confidence 88899999999999999985 2 245555 8899999999864
No 54
>PRK11071 esterase YqiA; Provisional
Probab=99.83 E-value=2.2e-19 Score=148.99 Aligned_cols=86 Identities=19% Similarity=0.134 Sum_probs=69.3
Q ss_pred CEeeccCCCCccchhh--hHHHHhhh-CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNR--AMKPLAKT-TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~--~~~~l~~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
|||||||+++...|+. +.+.+.+. .+|+|+++|+||||. ..+..+.+++++
T Consensus 4 illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~--------------------------~~~~~l~~l~~~ 57 (190)
T PRK11071 4 LLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA--------------------------DAAELLESLVLE 57 (190)
T ss_pred EEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH--------------------------HHHHHHHHHHHH
Confidence 6899999999999984 23455432 368999999999862 124456788999
Q ss_pred hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++.+++++|||||||++++.+|.++|. .+|+++|+
T Consensus 58 ~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~ 92 (190)
T PRK11071 58 HGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPA 92 (190)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCC
Confidence 999999999999999999999999983 46888764
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=3.3e-19 Score=162.64 Aligned_cols=102 Identities=12% Similarity=0.189 Sum_probs=75.8
Q ss_pred CEeeccCCCCccch-----hhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSW-----NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~~~~w-----~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
||++||+..+.+.| +.++..|.+ .||+|+++|++|+|.|.... ....|........+..+.
T Consensus 65 vl~v~~~~~~~~~~d~~~~~~~~~~L~~-~G~~V~~~D~~g~g~s~~~~-------------~~~d~~~~~~~~~v~~l~ 130 (350)
T TIGR01836 65 LLIVYALVNRPYMLDLQEDRSLVRGLLE-RGQDVYLIDWGYPDRADRYL-------------TLDDYINGYIDKCVDYIC 130 (350)
T ss_pred EEEeccccccceeccCCCCchHHHHHHH-CCCeEEEEeCCCCCHHHhcC-------------CHHHHHHHHHHHHHHHHH
Confidence 58899987766665 578888876 58999999999999774210 011222111222244455
Q ss_pred HHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 76 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
+..+.++++++||||||++++.++..+|++|+++|+++|+.
T Consensus 131 ~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~ 171 (350)
T TIGR01836 131 RTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPV 171 (350)
T ss_pred HHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccc
Confidence 56788999999999999999999999999999999998754
No 56
>PLN02872 triacylglycerol lipase
Probab=99.82 E-value=1.5e-18 Score=158.82 Aligned_cols=109 Identities=19% Similarity=0.206 Sum_probs=77.4
Q ss_pred CEeeccCCCCccchhh------hHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHH-HHHHH
Q 019089 1 MVLFHGFGASVFSWNR------AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSV-LATLY 73 (346)
Q Consensus 1 ivllHG~~~~~~~w~~------~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~-~~~~~ 73 (346)
|||+||+++++..|.. ....|++ .||+|+++|+||+|.|..-... ++ +....-.|++.+.+ .|+.+
T Consensus 77 Vll~HGl~~ss~~w~~~~~~~sla~~La~-~GydV~l~n~RG~~~s~gh~~~-~~-----~~~~fw~~s~~e~a~~Dl~a 149 (395)
T PLN02872 77 VLLQHGLFMAGDAWFLNSPEQSLGFILAD-HGFDVWVGNVRGTRWSYGHVTL-SE-----KDKEFWDWSWQELALYDLAE 149 (395)
T ss_pred EEEeCcccccccceeecCcccchHHHHHh-CCCCcccccccccccccCCCCC-Cc-----cchhccCCcHHHHHHHHHHH
Confidence 6899999999999852 2234554 5899999999999876321100 00 00111247777777 57888
Q ss_pred HHHHh---cccceEEEEeChhHHHHHHHHhhchh---hhhhheeeccccc
Q 019089 74 FIDIL---AAEKAILVGHSAGALVAVNSYFEAPE---RVAALILIAPAIL 117 (346)
Q Consensus 74 ll~~l---~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvli~p~~~ 117 (346)
+++++ ..+++++|||||||++++. ++.+|+ +|+++++++|..+
T Consensus 150 ~id~i~~~~~~~v~~VGhS~Gg~~~~~-~~~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 150 MIHYVYSITNSKIFIVGHSQGTIMSLA-ALTQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred HHHHHHhccCCceEEEEECHHHHHHHH-HhhChHHHHHHHHHHHhcchhh
Confidence 88876 3478999999999999984 446776 7999999988653
No 57
>PRK13604 luxD acyl transferase; Provisional
Probab=99.81 E-value=1.2e-18 Score=151.85 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=73.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCC-CCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF-GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
||++|||+.+...+.+++..|.+ .||.|+.+|.||| |.|+..... . ...+ ...++..++++++..+
T Consensus 40 vIi~HGf~~~~~~~~~~A~~La~-~G~~vLrfD~rg~~GeS~G~~~~---------~--t~s~-g~~Dl~aaid~lk~~~ 106 (307)
T PRK13604 40 ILIASGFARRMDHFAGLAEYLSS-NGFHVIRYDSLHHVGLSSGTIDE---------F--TMSI-GKNSLLTVVDWLNTRG 106 (307)
T ss_pred EEEeCCCCCChHHHHHHHHHHHH-CCCEEEEecCCCCCCCCCCcccc---------C--cccc-cHHHHHHHHHHHHhcC
Confidence 58999999998778888888987 5899999999988 998642110 0 0011 1234444566666666
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+++.|+||||||.+++..|... .++++|+.+|.
T Consensus 107 ~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~ 140 (307)
T PRK13604 107 INNLGLIAASLSARIAYEVINEI--DLSFLITAVGV 140 (307)
T ss_pred CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCc
Confidence 78899999999999997666533 48888888864
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=1.3e-18 Score=150.65 Aligned_cols=99 Identities=35% Similarity=0.513 Sum_probs=80.0
Q ss_pred CEeeccCCCCccchhhhHHHHhhhC-CCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTT-SSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|+++||++++...|......+.... .|+|+++|+||||.|. .. .++....+.++..++++++
T Consensus 24 i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~----------------~~~~~~~~~~~~~~~~~~~ 86 (282)
T COG0596 24 LVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA----------------GYSLSAYADDLAALLDALG 86 (282)
T ss_pred EEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc----------------cccHHHHHHHHHHHHHHhC
Confidence 6899999999999987434443321 2899999999999985 00 1222333677889999999
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
..+++++||||||.+++.++.++|+++++++++++..
T Consensus 87 ~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 87 LEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred CCceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 9999999999999999999999999999999998653
No 59
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.8e-17 Score=144.84 Aligned_cols=285 Identities=20% Similarity=0.198 Sum_probs=154.8
Q ss_pred CEeeccCCCCccc-----------hhhhHHH---HhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHH
Q 019089 1 MVLFHGFGASVFS-----------WNRAMKP---LAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAF 66 (346)
Q Consensus 1 ivllHG~~~~~~~-----------w~~~~~~---l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~ 66 (346)
||++||+.++++. |+.++.+ +- ...|.||+.+..|.+..+..+.+..+. ..--......++..+
T Consensus 54 Vli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iD-t~r~fvIc~NvlG~c~GStgP~s~~p~-g~~yg~~FP~~ti~D 131 (368)
T COG2021 54 VLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPID-TERFFVICTNVLGGCKGSTGPSSINPG-GKPYGSDFPVITIRD 131 (368)
T ss_pred EEEeccccCcccccccCCCCCCccHHHhcCCCCCCC-ccceEEEEecCCCCCCCCCCCCCcCCC-CCccccCCCcccHHH
Confidence 6899999997644 4333321 11 125789999999988543333221111 000001123467778
Q ss_pred HHHHHHHHHHHhcccceE-EEEeChhHHHHHHHHhhchhhhhhheeeccccc-cccccccccccCCCCCCcccccccccc
Q 019089 67 SVLATLYFIDILAAEKAI-LVGHSAGALVAVNSYFEAPERVAALILIAPAIL-APRLIQKVDEANPLGRNEQTERDTSNL 144 (346)
Q Consensus 67 ~~~~~~~ll~~l~~~~~~-lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (346)
++..-..++++||++++. |||-|||||.+++++..||++|++++.|++... +|..+.
T Consensus 132 ~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia--------------------- 190 (368)
T COG2021 132 MVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA--------------------- 190 (368)
T ss_pred HHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH---------------------
Confidence 887777889999999966 899999999999999999999999999986432 111100
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHhh---------HHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHh
Q 019089 145 VNLLKPFLKVYTILSMFLKYITQAMMQVAKG---------MADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRR 215 (346)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (346)
++.. ....+.....+ .........+..-.-.+++.. .+.++|.......
T Consensus 191 -------------~~~~---~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~------~~~~rF~r~~~~~ 248 (368)
T COG2021 191 -------------FNEV---QRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEE------ELDERFGRRLQAD 248 (368)
T ss_pred -------------HHHH---HHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHH------HHHHHhccccccc
Confidence 0000 00000000000 000000000000000111100 0011111000000
Q ss_pred hhcC--ChHhHHHHHHHhcCcccccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHH
Q 019089 216 AWYN--SKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERL 293 (346)
Q Consensus 216 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~ 293 (346)
.... .....+-+++....++...=-...++....++........+.+....|+.|++|+|++.-+.|..+|++..+..
T Consensus 249 ~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~ 328 (368)
T COG2021 249 PLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRAL 328 (368)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHH
Confidence 0000 00011111111111110000011223333333333333344566778999999999999999999999999999
Q ss_pred HHhCCCCe-EEEec-CCCCCCchhCHHHHHHHHHHHHHH
Q 019089 294 SRAIPGST-FEVIK-NCGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 294 ~~~~p~~~-~~~i~-~~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
.+.++.+. +.+|+ ..||-.++...+.+...|..|++.
T Consensus 329 ~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 329 AEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 99998876 65654 469999999999999999999874
No 60
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.80 E-value=3.6e-19 Score=148.32 Aligned_cols=99 Identities=28% Similarity=0.343 Sum_probs=81.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh--
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL-- 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l-- 78 (346)
++|+||.+.+.-.|..++..|.....+||+|+|+||||.|... +....+.+....|+.++++++
T Consensus 77 l~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~--------------~e~dlS~eT~~KD~~~~i~~~fg 142 (343)
T KOG2564|consen 77 LLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVE--------------NEDDLSLETMSKDFGAVIKELFG 142 (343)
T ss_pred EEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccC--------------ChhhcCHHHHHHHHHHHHHHHhc
Confidence 4789999999999999999997766789999999999998632 223577777788888888876
Q ss_pred -cccceEEEEeChhHHHHHHHHhh--chhhhhhheeecc
Q 019089 79 -AAEKAILVGHSAGALVAVNSYFE--APERVAALILIAP 114 (346)
Q Consensus 79 -~~~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~p 114 (346)
...+++||||||||.||...|.. -|. +.++++|+-
T Consensus 143 e~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 143 ELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred cCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 24679999999999999877753 566 899999874
No 61
>PRK10566 esterase; Provisional
Probab=99.79 E-value=3.5e-18 Score=148.58 Aligned_cols=101 Identities=19% Similarity=0.238 Sum_probs=67.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCC-ch-hHHHHHHHHHHHHH-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNP-YS-MAFSVLATLYFIDI- 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~-ys-~~~~~~~~~~ll~~- 77 (346)
||++||++++...|..++..|.+ .||+|+++|+||||.|...... ..... +. ......++.++++.
T Consensus 30 vv~~HG~~~~~~~~~~~~~~l~~-~G~~v~~~d~~g~G~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l 98 (249)
T PRK10566 30 VFFYHGFTSSKLVYSYFAVALAQ-AGFRVIMPDAPMHGARFSGDEA----------RRLNHFWQILLQNMQEFPTLRAAI 98 (249)
T ss_pred EEEeCCCCcccchHHHHHHHHHh-CCCEEEEecCCcccccCCCccc----------cchhhHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999888888876 4899999999999976321100 00001 00 01112222223332
Q ss_pred -----hcccceEEEEeChhHHHHHHHHhhchhhhhhheee
Q 019089 78 -----LAAEKAILVGHSAGALVAVNSYFEAPERVAALILI 112 (346)
Q Consensus 78 -----l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli 112 (346)
++.+++.++||||||.+++.++.++|+....++++
T Consensus 99 ~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~ 138 (249)
T PRK10566 99 REEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLM 138 (249)
T ss_pred HhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEee
Confidence 24578999999999999999998888644444444
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.78 E-value=9.7e-18 Score=171.83 Aligned_cols=67 Identities=25% Similarity=0.411 Sum_probs=59.2
Q ss_pred hcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeE-EEecCCCCCCch---hCHHHHHHHHHHHHHHHh
Q 019089 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTF-EVIKNCGHVPQE---EKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 266 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~-~~i~~~GH~~~~---e~pe~~~~~i~~fl~~~~ 332 (346)
.+.+|++|+|+|+|++|.++|++.++.+.+.+|++++ .+++++||+.++ .-|+++...|.+||.+.-
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 4789999999999999999999999999999999987 677999999877 456788899999998754
No 63
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=8.6e-18 Score=133.47 Aligned_cols=90 Identities=33% Similarity=0.495 Sum_probs=72.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH--Hh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID--IL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~--~l 78 (346)
||++||++.+...|..++..|.+. ||.|+.+|+||+|.+... ..+..+++.+. ..
T Consensus 2 vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~ 58 (145)
T PF12695_consen 2 VVLLHGWGGSRRDYQPLAEALAEQ-GYAVVAFDYPGHGDSDGA----------------------DAVERVLADIRAGYP 58 (145)
T ss_dssp EEEECTTTTTTHHHHHHHHHHHHT-TEEEEEESCTTSTTSHHS----------------------HHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHC-CCEEEEEecCCCCccchh----------------------HHHHHHHHHHHhhcC
Confidence 689999999999999999999885 899999999999976310 12222333321 23
Q ss_pred cccceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
+.+++.++|||+||.+++.++.++ .+|+++|+++|
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 668899999999999999999988 89999999986
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.72 E-value=1.2e-16 Score=133.04 Aligned_cols=189 Identities=22% Similarity=0.346 Sum_probs=134.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA- 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~- 79 (346)
++++||...+......+...|+.+.+++|+.+|.+|+|.|+..+.+ .+.| ++..++.+.++.-.
T Consensus 63 lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE------------~n~y---~Di~avye~Lr~~~g 127 (258)
T KOG1552|consen 63 LLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE------------RNLY---ADIKAVYEWLRNRYG 127 (258)
T ss_pred EEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc------------ccch---hhHHHHHHHHHhhcC
Confidence 5889999888876666677777666789999999999999865421 1223 44555556666543
Q ss_pred -ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHHH
Q 019089 80 -AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTIL 158 (346)
Q Consensus 80 -~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (346)
.++++|+|+|||....+.+|.+.| ++++||.+|.. .. .+
T Consensus 128 ~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~--S~-------------------------------~r----- 167 (258)
T KOG1552|consen 128 SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFT--SG-------------------------------MR----- 167 (258)
T ss_pred CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccch--hh-------------------------------hh-----
Confidence 578999999999999999999999 99999998631 00 00
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCccccc
Q 019089 159 SMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVK 238 (346)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (346)
. ++... ....|++. +
T Consensus 168 --v---------------------~~~~~-------------------------~~~~~~d~--------------f--- 182 (258)
T KOG1552|consen 168 --V---------------------AFPDT-------------------------KTTYCFDA--------------F--- 182 (258)
T ss_pred --h---------------------hccCc-------------------------ceEEeecc--------------c---
Confidence 0 00000 00000000 0
Q ss_pred chhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCC-eEEEecCCCCCCchhCH
Q 019089 239 GWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQEEKV 317 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~~GH~~~~e~p 317 (346)
...+....|+||+|++||+.|.+++..+++.+.+..++. +..++.|+||.-..-.|
T Consensus 183 -----------------------~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~ 239 (258)
T KOG1552|consen 183 -----------------------PNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYP 239 (258)
T ss_pred -----------------------cccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCH
Confidence 001345678999999999999999999999999999875 77889999998765444
Q ss_pred HHHHHHHHHHHHHHhC
Q 019089 318 EEFVSIVARFLQRAFG 333 (346)
Q Consensus 318 e~~~~~i~~fl~~~~~ 333 (346)
++.+.+.+|+....+
T Consensus 240 -~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 240 -EYIEHLRRFISSVLP 254 (258)
T ss_pred -HHHHHHHHHHHHhcc
Confidence 478888899876543
No 65
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.69 E-value=1.2e-16 Score=138.54 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=76.5
Q ss_pred CEeeccCCCCc----cchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH---HHH
Q 019089 1 MVLFHGFGASV----FSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA---TLY 73 (346)
Q Consensus 1 ivllHG~~~~~----~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~---~~~ 73 (346)
|||+|||+.+. ..|..+++.|.+ .||+|+++|+||||.|.... ..+++...+.| +++
T Consensus 28 VlllHG~g~~~~~~~~~~~~la~~La~-~Gy~Vl~~Dl~G~G~S~g~~---------------~~~~~~~~~~Dv~~ai~ 91 (266)
T TIGR03101 28 VIYLPPFAEEMNKSRRMVALQARAFAA-GGFGVLQIDLYGCGDSAGDF---------------AAARWDVWKEDVAAAYR 91 (266)
T ss_pred EEEECCCcccccchhHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCcc---------------ccCCHHHHHHHHHHHHH
Confidence 58999998753 456666778875 58999999999999986421 12333334444 444
Q ss_pred HHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 74 ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++++.+.++++|+||||||.+++.+|.++|++++++|+++|.
T Consensus 92 ~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 92 WLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPV 133 (266)
T ss_pred HHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccc
Confidence 566667789999999999999999999999999999999874
No 66
>PRK11460 putative hydrolase; Provisional
Probab=99.64 E-value=8.6e-15 Score=125.53 Aligned_cols=59 Identities=12% Similarity=0.233 Sum_probs=46.5
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC----CCeEEEecCCCCCCchhCHHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 329 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~ 329 (346)
..|+++++|++|.++|.+.++++.+.+. +.+++.++++||.+..+.-+...+.+.+++.
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 4799999999999999998888877653 4577888999999976666666666655553
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.61 E-value=2.3e-13 Score=115.09 Aligned_cols=102 Identities=26% Similarity=0.379 Sum_probs=86.0
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
+|-+||-|+|..-|+.+.+.|-+ .|.|+|.+.+||||.++.++ ...|+-.+-..-+.+|++.+++
T Consensus 38 Vv~~hGsPGSH~DFkYi~~~l~~-~~iR~I~iN~PGf~~t~~~~--------------~~~~~n~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 38 VVAFHGSPGSHNDFKYIRPPLDE-AGIRFIGINYPGFGFTPGYP--------------DQQYTNEERQNFVNALLDELGI 102 (297)
T ss_pred EEEecCCCCCccchhhhhhHHHH-cCeEEEEeCCCCCCCCCCCc--------------ccccChHHHHHHHHHHHHHcCC
Confidence 46699999999999888888866 68999999999999987532 2457766666678899999998
Q ss_pred cc-eEEEEeChhHHHHHHHHhhchhhhhhheeeccccccc
Q 019089 81 EK-AILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 119 (346)
Q Consensus 81 ~~-~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p 119 (346)
++ ++.+|||.||-.|+.+|..+| +.+++|++|+++.|
T Consensus 103 ~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 103 KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRP 140 (297)
T ss_pred CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcccc
Confidence 64 888999999999999999996 67999999887765
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=99.59 E-value=4e-14 Score=125.09 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=71.8
Q ss_pred CEeeccCCCCccchhhhH--HHHhhhCCCeEEEEcCCCCCC-----CCC-C---CCCCCCCCCCCCC--CCCCCchhHHH
Q 019089 1 MVLFHGFGASVFSWNRAM--KPLAKTTSSKVLAFDRPAFGL-----TSR-V---FPFQQPTPDTENK--KPLNPYSMAFS 67 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~--~~l~~~~~~~via~Dl~G~G~-----S~~-~---~~~~~~~~~~~~~--~~~~~ys~~~~ 67 (346)
|+|+||++++...|.... ..+....++.|+.||..++|. +.. . ..+...+...... .....|-.++.
T Consensus 50 v~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 129 (283)
T PLN02442 50 LYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKEL 129 (283)
T ss_pred EEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHH
Confidence 689999999988885432 234334589999999987771 100 0 0000000000000 00011222233
Q ss_pred HHHHHHHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 68 VLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 68 ~~~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
...+..+.+.++.++++|+||||||+.++.++.++|+++++++.++|.
T Consensus 130 ~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 130 PKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred HHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 333444455567889999999999999999999999999999998864
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.58 E-value=1.7e-13 Score=120.76 Aligned_cols=113 Identities=19% Similarity=0.174 Sum_probs=75.9
Q ss_pred CEeeccCCCCccchhh--hHHHHhhhCCCeEEEEcC--CCCCCCCCCCC-------CCCCCCCCCCCCCCCCchhHHH-H
Q 019089 1 MVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDR--PAFGLTSRVFP-------FQQPTPDTENKKPLNPYSMAFS-V 68 (346)
Q Consensus 1 ivllHG~~~~~~~w~~--~~~~l~~~~~~~via~Dl--~G~G~S~~~~~-------~~~~~~~~~~~~~~~~ys~~~~-~ 68 (346)
|+|+||++++...|.. .+..+....|+.||+||. +|+|.+..... +...+. ..+ .....|+.... .
T Consensus 45 vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~-~~~-~~~~~~~~~~~~~ 122 (275)
T TIGR02821 45 LWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDA-TEE-PWSQHYRMYSYIV 122 (275)
T ss_pred EEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccC-CcC-cccccchHHHHHH
Confidence 6899999999998854 244565545899999998 66664431100 000000 000 00113444333 4
Q ss_pred HHHHHHHHH---hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 69 LATLYFIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 69 ~~~~~ll~~---l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.++..+++. ++.+++.|+||||||++++.++.++|+.++++++++|.
T Consensus 123 ~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 123 QELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred HHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 566677776 45678999999999999999999999999999998764
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.58 E-value=8.1e-14 Score=118.22 Aligned_cols=64 Identities=25% Similarity=0.381 Sum_probs=51.6
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHHHhC----CCCeEEEecCCCCCCc-hhCHHHHHHHHHHHHHHHhC
Q 019089 270 ISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQ-EEKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 270 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~~-~e~pe~~~~~i~~fl~~~~~ 333 (346)
+++|+|+++|++|..+|...+..+.+.+ .+.++.++|++||... -+....+.+.+.+|+++.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 6799999999999999999888776644 3478999999999554 45556888889999998764
No 71
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.58 E-value=7.8e-15 Score=134.53 Aligned_cols=101 Identities=20% Similarity=0.230 Sum_probs=73.8
Q ss_pred CEeeccCCCCc--cchhh-hHHHHhh-hCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASV--FSWNR-AMKPLAK-TTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~--~~w~~-~~~~l~~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
+|+||||+++. ..|.. +...|.. ..+++||++|++|||.|..+.. ..|+ ...+.++.++++
T Consensus 44 vIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--------------~~~t-~~vg~~la~lI~ 108 (442)
T TIGR03230 44 FIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--------------AAYT-KLVGKDVAKFVN 108 (442)
T ss_pred EEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--------------cccH-HHHHHHHHHHHH
Confidence 58999999764 45665 3344432 2258999999999998764311 1232 233344556666
Q ss_pred Hh------cccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 77 IL------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 77 ~l------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
.| ++++++||||||||.||..++..+|++|.++++++|+.
T Consensus 109 ~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 109 WMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred HHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 54 47899999999999999999999999999999999864
No 72
>PLN00021 chlorophyllase
Probab=99.57 E-value=9.8e-14 Score=123.54 Aligned_cols=95 Identities=18% Similarity=0.235 Sum_probs=69.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH----
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID---- 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~---- 76 (346)
|||+||++.+...|..+++.|.+ .||.|+++|++|++.+.. ...+. .+.++..++.
T Consensus 55 Vv~lHG~~~~~~~y~~l~~~Las-~G~~VvapD~~g~~~~~~------------------~~~i~-d~~~~~~~l~~~l~ 114 (313)
T PLN00021 55 LLFLHGYLLYNSFYSQLLQHIAS-HGFIVVAPQLYTLAGPDG------------------TDEIK-DAAAVINWLSSGLA 114 (313)
T ss_pred EEEECCCCCCcccHHHHHHHHHh-CCCEEEEecCCCcCCCCc------------------hhhHH-HHHHHHHHHHhhhh
Confidence 68999999999999999999976 489999999998753321 01111 1222222222
Q ss_pred H-------hcccceEEEEeChhHHHHHHHHhhchh-----hhhhheeeccc
Q 019089 77 I-------LAAEKAILVGHSAGALVAVNSYFEAPE-----RVAALILIAPA 115 (346)
Q Consensus 77 ~-------l~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvli~p~ 115 (346)
. .+.++++|+||||||.+++.+|.++|+ +|+++|+++|.
T Consensus 115 ~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 115 AVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred hhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 1 345789999999999999999999875 57888888763
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.56 E-value=1.9e-13 Score=110.13 Aligned_cols=97 Identities=21% Similarity=0.266 Sum_probs=71.6
Q ss_pred CEeeccCCCCccchh--hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFSWN--RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~--~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
+||+|||-++...=. .++..|.+ .|+.++.+|.+|-|.|+.... ...|.. .++|+..+++++
T Consensus 36 vvlcHGfrS~Kn~~~~~~vA~~~e~-~gis~fRfDF~GnGeS~gsf~-------------~Gn~~~--eadDL~sV~q~~ 99 (269)
T KOG4667|consen 36 VVLCHGFRSHKNAIIMKNVAKALEK-EGISAFRFDFSGNGESEGSFY-------------YGNYNT--EADDLHSVIQYF 99 (269)
T ss_pred EEEeeccccccchHHHHHHHHHHHh-cCceEEEEEecCCCCcCCccc-------------cCcccc--hHHHHHHHHHHh
Confidence 589999999985432 34555654 589999999999999975431 123443 357788888887
Q ss_pred ccc-c--eEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 79 AAE-K--AILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 79 ~~~-~--~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
... + -+++|||=||.+++.+|.++++ ++.++.++.
T Consensus 100 s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsG 137 (269)
T KOG4667|consen 100 SNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSG 137 (269)
T ss_pred ccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEccc
Confidence 432 2 5679999999999999999987 777777653
No 74
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.50 E-value=1.4e-13 Score=110.95 Aligned_cols=199 Identities=18% Similarity=0.287 Sum_probs=129.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH-HHHHHHH--
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA-TLYFIDI-- 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~-~~~ll~~-- 77 (346)
++.+||..++-...-.++.-+-...+.+|..+++||||+|...+.+ -.+..+.+. +..++.+
T Consensus 81 lLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE---------------~GL~lDs~avldyl~t~~~ 145 (300)
T KOG4391|consen 81 LLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE---------------EGLKLDSEAVLDYLMTRPD 145 (300)
T ss_pred EEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc---------------cceeccHHHHHHHHhcCcc
Confidence 4788999999877766665555556789999999999999764321 011122222 2234443
Q ss_pred hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHHHH
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTI 157 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (346)
++..|++|.|.|+||.+|+.+|.+..+++.++++-++..--|.. ..+..-++.
T Consensus 146 ~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~----------------------~i~~v~p~~----- 198 (300)
T KOG4391|consen 146 LDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHM----------------------AIPLVFPFP----- 198 (300)
T ss_pred CCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhh----------------------hhheeccch-----
Confidence 34567999999999999999999999999999997653110100 000000000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcccc
Q 019089 158 LSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRV 237 (346)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (346)
.+.+..++. ..-|.+
T Consensus 199 -------------------~k~i~~lc~----------------------------kn~~~S------------------ 213 (300)
T KOG4391|consen 199 -------------------MKYIPLLCY----------------------------KNKWLS------------------ 213 (300)
T ss_pred -------------------hhHHHHHHH----------------------------Hhhhcc------------------
Confidence 000000000 000000
Q ss_pred cchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCC--CeEEEecCCCCCCchh
Q 019089 238 KGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEE 315 (346)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~~e 315 (346)
.....+.++|.|+|.|..|.++|+-+.+.+.+..|. .++.++|++.|.--+-
T Consensus 214 --------------------------~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i 267 (300)
T KOG4391|consen 214 --------------------------YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI 267 (300)
T ss_pred --------------------------hhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE
Confidence 012335579999999999999999999999999876 5789999999965554
Q ss_pred CHHHHHHHHHHHHHHHhC
Q 019089 316 KVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 316 ~pe~~~~~i~~fl~~~~~ 333 (346)
. +-..+.|.+|+.+.-.
T Consensus 268 ~-dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 268 C-DGYFQAIEDFLAEVVK 284 (300)
T ss_pred e-ccHHHHHHHHHHHhcc
Confidence 3 3456788999988654
No 75
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.49 E-value=5.5e-14 Score=123.38 Aligned_cols=101 Identities=22% Similarity=0.206 Sum_probs=72.9
Q ss_pred CEeeccCCCCc-cchhhhH-HHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASV-FSWNRAM-KPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~-~~w~~~~-~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
+|+||||+++. ..|...+ ..+....+++||++|++|++.+..+ ...++......++..+++.+
T Consensus 39 vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~---------------~a~~~~~~v~~~la~~l~~L 103 (275)
T cd00707 39 RFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP---------------QAVNNTRVVGAELAKFLDFL 103 (275)
T ss_pred EEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH---------------HHHHhHHHHHHHHHHHHHHH
Confidence 58999999998 7887654 3444434699999999997433211 01122333334444555543
Q ss_pred ------cccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 79 ------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 79 ------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
+.++++||||||||.+|..++.++|++|+++++++|+.
T Consensus 104 ~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 104 VDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 45789999999999999999999999999999999874
No 76
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.49 E-value=7.2e-13 Score=115.05 Aligned_cols=105 Identities=21% Similarity=0.263 Sum_probs=86.9
Q ss_pred CEeeccCCCCccchhhhHHHHhhhC--------CCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTT--------SSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~--------~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~ 72 (346)
||++|||+++-+.|..+++-|.... -|.||+|.+||||.|+.+. ...++-.+.+..+.
T Consensus 155 lLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s--------------k~GFn~~a~Arvmr 220 (469)
T KOG2565|consen 155 LLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS--------------KTGFNAAATARVMR 220 (469)
T ss_pred eEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc--------------cCCccHHHHHHHHH
Confidence 6899999999999999988886531 2579999999999998642 23567667777788
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccc
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 119 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p 119 (346)
.+|-++|.+++.|=|-+||+.|+..+|..+|++|.|+=+--+...+|
T Consensus 221 kLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~ 267 (469)
T KOG2565|consen 221 KLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSP 267 (469)
T ss_pred HHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCc
Confidence 89999999999999999999999999999999999987754443333
No 77
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.47 E-value=1.6e-12 Score=112.35 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=53.4
Q ss_pred hhcccCCccEEEEEeCCCCCcChHHHHHHHH-hCCCCeEEEecCCCCCCchh----CHH-HHHHHHHHHHHHH
Q 019089 265 KRLHEISCPVLIVTGDTDRIVPSWNAERLSR-AIPGSTFEVIKNCGHVPQEE----KVE-EFVSIVARFLQRA 331 (346)
Q Consensus 265 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~-~~p~~~~~~i~~~GH~~~~e----~pe-~~~~~i~~fl~~~ 331 (346)
..|.+|.+|+|+|++.+|++++++..-+... ..|+..+.+-+-+||..++. +|+ +.-+.+.+|++..
T Consensus 268 ~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 268 PLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 4678999999999999999999877666655 67888898888899998887 555 3344567887754
No 78
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.44 E-value=4.5e-12 Score=105.25 Aligned_cols=61 Identities=20% Similarity=0.311 Sum_probs=53.5
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCC-CCeEEEecCCCCCCchhCHHHHHHHHHHHHH
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 329 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~ 329 (346)
..++||+.++.|++|+.++.+....+.+... .-++..++ +||+...++.++|.+.|.+.+.
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 4678999999999999999998888888776 56888887 5999999999999999988875
No 79
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.44 E-value=3.3e-11 Score=103.33 Aligned_cols=245 Identities=22% Similarity=0.312 Sum_probs=122.3
Q ss_pred EeeccCCCCccc-hhhhH-----HHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 2 VLFHGFGASVFS-WNRAM-----KPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 2 vllHG~~~~~~~-w~~~~-----~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
|=.|-.|.+... |..++ ..+.+ .|-++=+|.||+..-....+. ...-.|+++.++.+.+++
T Consensus 27 lT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~-----------~y~yPsmd~LAe~l~~Vl 93 (283)
T PF03096_consen 27 LTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPE-----------GYQYPSMDQLAEMLPEVL 93 (283)
T ss_dssp EEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----T-----------T-----HHHHHCTHHHHH
T ss_pred EEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccc-----------cccccCHHHHHHHHHHHH
Confidence 445667767644 65543 23333 478999999999864322111 011236888888899999
Q ss_pred HHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccccccccccccCCCCCCccccccccccccccchhhHHH
Q 019089 76 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVY 155 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (346)
++++++.++-+|--.|++|-.++|.+||++|.++||++|...+++-. ..++
T Consensus 94 ~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~-----------------------------Ew~~ 144 (283)
T PF03096_consen 94 DHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM-----------------------------EWFY 144 (283)
T ss_dssp HHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH-----------------------------HHHH
T ss_pred HhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH-----------------------------HHHH
Confidence 99999999999999999999999999999999999999754433210 0000
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHhhhhHHHHHhhhcCChHhHHHHHHHhcCcc
Q 019089 156 TILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPL 235 (346)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (346)
..+..+ .+.. ..+.+....++ ....|+..... .+.++.+.....+.+..
T Consensus 145 ~K~~~~--------------------~L~~----~gmt~~~~d~L---l~h~Fg~~~~~----~n~Dlv~~yr~~l~~~~ 193 (283)
T PF03096_consen 145 QKLSSW--------------------LLYS----YGMTSSVKDYL---LWHYFGKEEEE----NNSDLVQTYRQHLDERI 193 (283)
T ss_dssp HHHH-------------------------------CTTS-HHHHH---HHHHS-HHHHH----CT-HHHHHHHHHHHT-T
T ss_pred HHHhcc--------------------cccc----cccccchHHhh---hhccccccccc----ccHHHHHHHHHHHhcCC
Confidence 000000 0000 00000000000 00111100000 11111111111111100
Q ss_pred cccchhHHHHHHHHHHhhcccCCCChhHHhhcccCCccEEEEEeCCCCCcChHHHHHHHHhC-C-CCeEEEecCCCCCCc
Q 019089 236 RVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI-P-GSTFEVIKNCGHVPQ 313 (346)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-p-~~~~~~i~~~GH~~~ 313 (346)
+ ...+..+..+. ..|.++...+....||+|++.|+..+.. +.+..+..++ | .+++..++|||=.+.
T Consensus 194 N----p~Nl~~f~~sy------~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~ 261 (283)
T PF03096_consen 194 N----PKNLALFLNSY------NSRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVL 261 (283)
T ss_dssp T----HHHHHHHHHHH------HT-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HH
T ss_pred C----HHHHHHHHHHH------hccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCccc
Confidence 0 00111111100 1233444455667799999999999864 3456777766 3 357899999999999
Q ss_pred hhCHHHHHHHHHHHHHHH
Q 019089 314 EEKVEEFVSIVARFLQRA 331 (346)
Q Consensus 314 ~e~pe~~~~~i~~fl~~~ 331 (346)
.|+|+++++.+.=|++..
T Consensus 262 eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 262 EEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp HH-HHHHHHHHHHHHHHT
T ss_pred ccCcHHHHHHHHHHHccC
Confidence 999999999999998753
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.41 E-value=2.2e-12 Score=109.23 Aligned_cols=109 Identities=13% Similarity=0.119 Sum_probs=68.4
Q ss_pred CEeeccCCCCccchhh--hHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHH-HHHHH
Q 019089 1 MVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL-YFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~--~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~-~ll~~ 77 (346)
||++||.+.+...|.. -...+.+..||.|++||.+|+|.+......-.+. . ..... .....+.+++ .+.+.
T Consensus 16 vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~----~-~~~~~-~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 16 VLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTH----H-RARGT-GEVESLHQLIDAVKAN 89 (212)
T ss_pred EEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCcc----c-cCCCC-ccHHHHHHHHHHHHHh
Confidence 6899999998877651 1334445468999999999998543210000000 0 00000 0111122222 22223
Q ss_pred hc--ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 78 LA--AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 78 l~--~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+ .++++|+||||||++++.++.++|+++++++.+++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 33 358999999999999999999999999999988754
No 81
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.40 E-value=4.2e-11 Score=107.31 Aligned_cols=68 Identities=19% Similarity=0.326 Sum_probs=50.8
Q ss_pred HhhcccCCccEEEEEeCCCCCcChHH-HHHHHHhCCCCeEEEecCCCCCCchhC----HHHHHHH-HHHHHHHH
Q 019089 264 AKRLHEISCPVLIVTGDTDRIVPSWN-AERLSRAIPGSTFEVIKNCGHVPQEEK----VEEFVSI-VARFLQRA 331 (346)
Q Consensus 264 ~~~l~~i~~Pvl~i~G~~D~~~~~~~-~~~~~~~~p~~~~~~i~~~GH~~~~e~----pe~~~~~-i~~fl~~~ 331 (346)
...+.+|.+|+|+|.+.+|+++|... -....+.-|+.-+++-.-+||..++|. +....+. +.+|+...
T Consensus 315 ~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 315 SNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred hhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 35678999999999999999999853 344455578877788778899999988 2344444 66776643
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.37 E-value=8.2e-12 Score=106.07 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=58.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCC------CCCC--CCCCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPA------FGLT--SRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G------~G~S--~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~ 72 (346)
|||+||+|++...|...........+.+++.+.-|- .|.. .+-... . .+.....+.-.+...+..+.
T Consensus 17 vi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~-~----~~~~~~~~~~~i~~s~~~l~ 91 (216)
T PF02230_consen 17 VILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIY-D----FDPEGPEDEAGIEESAERLD 91 (216)
T ss_dssp EEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BS-C----SSSSSEB-HHHHHHHHHHHH
T ss_pred EEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeecc-C----CCcchhhhHHHHHHHHHHHH
Confidence 689999999997776544312122245677775542 2321 221100 0 00000000111222233344
Q ss_pred HHHHHh-----cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 73 YFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 73 ~ll~~l-----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++++.. +.++++|.|.|.||++++.+++++|+.+.++|.+++.
T Consensus 92 ~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~ 139 (216)
T PF02230_consen 92 ELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGY 139 (216)
T ss_dssp HHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES--
T ss_pred HHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecc
Confidence 555532 4568999999999999999999999999999999753
No 83
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.36 E-value=6.1e-12 Score=101.99 Aligned_cols=49 Identities=22% Similarity=0.474 Sum_probs=39.6
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~ 320 (346)
.+|.++|.+++|+.+|.+.++++++.+ +++++.++++||+.-.+.-..|
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G~~~~ 162 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASGFGPW 162 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGTHSS-
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccCCCch
Confidence 467799999999999999999999999 8899999999999887665443
No 84
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.35 E-value=3.6e-10 Score=95.73 Aligned_cols=102 Identities=24% Similarity=0.232 Sum_probs=77.7
Q ss_pred EeeccCCCCccc-hhhh-----HHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 2 VLFHGFGASVFS-WNRA-----MKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 2 vllHG~~~~~~~-w~~~-----~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
|=.|..+.++.. |..+ +..+.+ .|.++-+|.|||-.-....+. + ..-.|++..++++..++
T Consensus 50 iTyhDlglN~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp~~p~--------~---y~yPsmd~LAd~l~~VL 116 (326)
T KOG2931|consen 50 ITYHDLGLNHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAPSFPE--------G---YPYPSMDDLADMLPEVL 116 (326)
T ss_pred EEecccccchHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCccCCC--------C---CCCCCHHHHHHHHHHHH
Confidence 446888888754 6554 233443 378999999998754221110 0 01236888999999999
Q ss_pred HHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 76 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++++++.++-+|---|++|-.++|+.||+||.+||||++..
T Consensus 117 ~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 117 DHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred HhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 99999999999999999999999999999999999998643
No 85
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.31 E-value=1.2e-10 Score=109.17 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=71.9
Q ss_pred CEeeccCCCCccchh-----hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWN-----RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~~~~w~-----~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
||+++.+-.-.+.|+ .++..|.+ .|++|+.+|+++-|.+.+ ..++++++..+.+.+
T Consensus 218 LLIVPp~INK~YIlDL~P~~SlVr~lv~-qG~~VflIsW~nP~~~~r------------------~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 218 LLVVPPQINKFYIFDLSPEKSFVQYCLK-NQLQVFIISWRNPDKAHR------------------EWGLSTYVDALKEAV 278 (560)
T ss_pred EEEechhhhhhheeecCCcchHHHHHHH-cCCeEEEEeCCCCChhhc------------------CCCHHHHHHHHHHHH
Confidence 578888887778885 57778876 589999999998664431 244555554444444
Q ss_pred HH----hcccceEEEEeChhHHHHHH----HHhhchh-hhhhheeeccc
Q 019089 76 DI----LAAEKAILVGHSAGALVAVN----SYFEAPE-RVAALILIAPA 115 (346)
Q Consensus 76 ~~----l~~~~~~lvGhS~GG~ia~~----~a~~~p~-~v~~lvli~p~ 115 (346)
+. .|.++++++||||||.++.. +++++++ +|+++++++++
T Consensus 279 d~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatp 327 (560)
T TIGR01839 279 DAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSL 327 (560)
T ss_pred HHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecc
Confidence 43 46789999999999999996 7788886 89999998753
No 86
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.30 E-value=7.1e-10 Score=96.82 Aligned_cols=107 Identities=23% Similarity=0.298 Sum_probs=86.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhh--CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKT--TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
||||.|.|+--..|..++..|.+. ..+.|+++.+.||-.+..... .......|++.++++--.++++.+
T Consensus 5 i~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~---------~~~~~~~~sL~~QI~hk~~~i~~~ 75 (266)
T PF10230_consen 5 IVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSK---------FSPNGRLFSLQDQIEHKIDFIKEL 75 (266)
T ss_pred EEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccc---------ccCCCCccCHHHHHHHHHHHHHHH
Confidence 689999999999999999988765 368999999999987653210 001245799998888777777764
Q ss_pred c------ccceEEEEeChhHHHHHHHHhhch---hhhhhheeecccc
Q 019089 79 A------AEKAILVGHSAGALVAVNSYFEAP---ERVAALILIAPAI 116 (346)
Q Consensus 79 ~------~~~~~lvGhS~GG~ia~~~a~~~p---~~v~~lvli~p~~ 116 (346)
- -.+++|+|||.|++|++++..+++ .+|++++++.|.+
T Consensus 76 ~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 76 IPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3 356999999999999999999999 8999999998864
No 87
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=8.6e-12 Score=121.46 Aligned_cols=97 Identities=23% Similarity=0.209 Sum_probs=71.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc-----------hhHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY-----------SMAFSVL 69 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y-----------s~~~~~~ 69 (346)
|||+||+++++..|..++..|.+ .||+||++|+||||.|...... +....+ . ...-.| ++...+.
T Consensus 452 VVllHG~~g~~~~~~~lA~~La~-~Gy~VIaiDlpGHG~S~~~~~~-~~~~a~-~-~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 452 VIYQHGITGAKENALAFAGTLAA-AGVATIAIDHPLHGARSFDANA-SGVNAT-N-ANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHh-CCcEEEEeCCCCCCcccccccc-cccccc-c-cCccceeccccccccccCHHHHHH
Confidence 68999999999999999999976 4799999999999999543110 000000 0 000112 5677778
Q ss_pred HHHHHHHHhc----------------ccceEEEEeChhHHHHHHHHhh
Q 019089 70 ATLYFIDILA----------------AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 70 ~~~~ll~~l~----------------~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
|+..+...++ ..+++++||||||+++..++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 8888877776 3589999999999999988865
No 88
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.28 E-value=2.4e-11 Score=118.61 Aligned_cols=67 Identities=24% Similarity=0.376 Sum_probs=55.0
Q ss_pred cccCCccEEEEEeCCCCCcChHHHHHHHHhC----CCCeEEEecCCCCCCch-hCHHHHHHHHHHHHHHHhC
Q 019089 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 267 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~~~-e~pe~~~~~i~~fl~~~~~ 333 (346)
..++++|+|+|||+.|.-+|.+++..+.+.+ .+.+++++|+.||.+.- ++-..+.+.+.+|+.+.++
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 4578999999999999999999888886654 34678999999997776 5567788888899887654
No 89
>PRK10162 acetyl esterase; Provisional
Probab=99.26 E-value=8.1e-10 Score=99.41 Aligned_cols=97 Identities=22% Similarity=0.218 Sum_probs=66.4
Q ss_pred CEeeccCC---CCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHH---HHHHHH
Q 019089 1 MVLFHGFG---ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSV---LATLYF 74 (346)
Q Consensus 1 ivllHG~~---~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~---~~~~~l 74 (346)
||++||-+ ++...|+.+...|....|+.|+.+|+|.-..... +-.+.+.. ..+.+.
T Consensus 84 vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~------------------p~~~~D~~~a~~~l~~~ 145 (318)
T PRK10162 84 LFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARF------------------PQAIEEIVAVCCYFHQH 145 (318)
T ss_pred EEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCC------------------CCcHHHHHHHHHHHHHh
Confidence 68999955 5667788888888876689999999996332211 01112111 122233
Q ss_pred HHHhcc--cceEEEEeChhHHHHHHHHhhc------hhhhhhheeeccc
Q 019089 75 IDILAA--EKAILVGHSAGALVAVNSYFEA------PERVAALILIAPA 115 (346)
Q Consensus 75 l~~l~~--~~~~lvGhS~GG~ia~~~a~~~------p~~v~~lvli~p~ 115 (346)
.+.+++ ++++|+|+|+||.+++.++.+. +.++++++++.|.
T Consensus 146 ~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~ 194 (318)
T PRK10162 146 AEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGL 194 (318)
T ss_pred HHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCc
Confidence 334554 5899999999999999988753 3678999998764
No 90
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.23 E-value=2.2e-10 Score=97.51 Aligned_cols=100 Identities=20% Similarity=0.031 Sum_probs=59.9
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchh--------HHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSM--------AFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~--------~~~~~~~~ 72 (346)
||++|+..+-...-+.++..|++ .||.|++||+-+-........ ......+ +....++.
T Consensus 17 Vvv~~d~~G~~~~~~~~ad~lA~-~Gy~v~~pD~f~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 83 (218)
T PF01738_consen 17 VVVIHDIFGLNPNIRDLADRLAE-EGYVVLAPDLFGGRGAPPSDP------------EEAFAAMRELFAPRPEQVAADLQ 83 (218)
T ss_dssp EEEE-BTTBS-HHHHHHHHHHHH-TT-EEEEE-CCCCTS--CCCH------------HCHHHHHHHCHHHSHHHHHHHHH
T ss_pred EEEEcCCCCCchHHHHHHHHHHh-cCCCEEecccccCCCCCccch------------hhHHHHHHHHHhhhHHHHHHHHH
Confidence 68999977766555667888887 489999999865332010000 0000111 12223343
Q ss_pred HHHHHh---c---ccceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 73 YFIDIL---A---AEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 73 ~ll~~l---~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
+.++.+ . .+++.++|.||||.+++.+|.+. +++++.|..-|
T Consensus 84 aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 84 AAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 444444 2 46899999999999999988776 68888877654
No 91
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.22 E-value=2.4e-09 Score=91.74 Aligned_cols=97 Identities=24% Similarity=0.240 Sum_probs=74.8
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|+|+|+.+++...|.+++..|... .+.|++++.+|++.... ..-++++.+....+.|.....
T Consensus 3 lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~~-----------------~~~si~~la~~y~~~I~~~~~ 64 (229)
T PF00975_consen 3 LFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRGDDEP-----------------PPDSIEELASRYAEAIRARQP 64 (229)
T ss_dssp EEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSCTTSH-----------------EESSHHHHHHHHHHHHHHHTS
T ss_pred EEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCCCCCC-----------------CCCCHHHHHHHHHHHhhhhCC
Confidence 589999999999999999888753 26899999999983221 123566667666666666555
Q ss_pred c-ceEEEEeChhHHHHHHHHhhch---hhhhhheeeccc
Q 019089 81 E-KAILVGHSAGALVAVNSYFEAP---ERVAALILIAPA 115 (346)
Q Consensus 81 ~-~~~lvGhS~GG~ia~~~a~~~p---~~v~~lvli~p~ 115 (346)
+ +++|+|||+||.+|+++|.+.- ..|..+++++++
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 5 8999999999999999997643 448899999853
No 92
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.18 E-value=1.3e-09 Score=89.40 Aligned_cols=87 Identities=25% Similarity=0.368 Sum_probs=59.6
Q ss_pred CEeeccCCCCccchhhh-H-HHHhhhC-CCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRA-M-KPLAKTT-SSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~-~-~~l~~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
|+.||||.++..+.... + ..+.+.. ..+++++|++-+ .......+..+++.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------------------p~~a~~~l~~~i~~ 55 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------------------PEEAIAQLEQLIEE 55 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------------------HHHHHHHHHHHHHh
Confidence 68999999999887742 2 3343321 245677776621 11222335577777
Q ss_pred hcccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
...+.+.|||+||||..|..+|.+++ +++ ||++|+.
T Consensus 56 ~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 56 LKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred CCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 77777999999999999999998875 333 8888753
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.16 E-value=6.4e-09 Score=92.97 Aligned_cols=112 Identities=21% Similarity=0.175 Sum_probs=61.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCC-CCCCCCCCC--CCCCC-CCCCCC-CCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG-LTSRVFPFQ--QPTPD-TENKKP-LNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G-~S~~~~~~~--~~~~~-~~~~~~-~~~ys~~~~~~~~~~ll 75 (346)
||.+||.++....|...+. ++. .|+-|+++|.||.| .|....... ..... ...... .+.|-+.....|....+
T Consensus 86 vv~~hGyg~~~~~~~~~~~-~a~-~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~rav 163 (320)
T PF05448_consen 86 VVQFHGYGGRSGDPFDLLP-WAA-AGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAV 163 (320)
T ss_dssp EEEE--TT--GGGHHHHHH-HHH-TT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCCcccccc-ccc-CCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHH
Confidence 5789999999888865543 433 58999999999999 332211110 00000 010111 23343433334433333
Q ss_pred HH---h---cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 76 DI---L---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 76 ~~---l---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+. + +.+++.+.|.|.||.+++.+|+.. ++|++++..-|.
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~rv~~~~~~vP~ 208 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-PRVKAAAADVPF 208 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-ST-SEEEEESES
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-ccccEEEecCCC
Confidence 33 2 457899999999999999888866 479988888764
No 94
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.10 E-value=2.4e-09 Score=114.10 Aligned_cols=96 Identities=18% Similarity=0.082 Sum_probs=80.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
++|+||+++++..|..+...|.. +++|+++|++|+|.+. ...++++..+.++.+.++.+..
T Consensus 1071 l~~lh~~~g~~~~~~~l~~~l~~--~~~v~~~~~~g~~~~~-----------------~~~~~l~~la~~~~~~i~~~~~ 1131 (1296)
T PRK10252 1071 LFCFHPASGFAWQFSVLSRYLDP--QWSIYGIQSPRPDGPM-----------------QTATSLDEVCEAHLATLLEQQP 1131 (1296)
T ss_pred eEEecCCCCchHHHHHHHHhcCC--CCcEEEEECCCCCCCC-----------------CCCCCHHHHHHHHHHHHHhhCC
Confidence 68999999999999999888864 4799999999998542 1246888888888888887765
Q ss_pred c-ceEEEEeChhHHHHHHHHhh---chhhhhhheeeccc
Q 019089 81 E-KAILVGHSAGALVAVNSYFE---APERVAALILIAPA 115 (346)
Q Consensus 81 ~-~~~lvGhS~GG~ia~~~a~~---~p~~v~~lvli~p~ 115 (346)
. +++++||||||++|+++|.+ +++++..++++++.
T Consensus 1132 ~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1132 HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 4 79999999999999999986 57889999998763
No 95
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.10 E-value=1.3e-10 Score=112.36 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=71.7
Q ss_pred CEeeccCCCCcc---chh-hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVF---SWN-RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~---~w~-~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
||++||++.+.. .|. .....|.+ .||.|+++|+||+|.|..... .+. ...+.|+.++++
T Consensus 25 Il~~~gyg~~~~~~~~~~~~~~~~l~~-~Gy~vv~~D~RG~g~S~g~~~---------------~~~-~~~~~D~~~~i~ 87 (550)
T TIGR00976 25 ILSRTPYGKDAGLRWGLDKTEPAWFVA-QGYAVVIQDTRGRGASEGEFD---------------LLG-SDEAADGYDLVD 87 (550)
T ss_pred EEEecCCCCchhhccccccccHHHHHh-CCcEEEEEeccccccCCCceE---------------ecC-cccchHHHHHHH
Confidence 688999998763 233 23445555 589999999999999975321 111 223445556666
Q ss_pred Hhcc-----cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 77 ILAA-----EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 77 ~l~~-----~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+.. .++.++||||||++++.+|..+|++++++|..++.
T Consensus 88 ~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 88 WIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGV 131 (550)
T ss_pred HHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcc
Confidence 5532 58999999999999999999999999999998753
No 96
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.09 E-value=8.6e-09 Score=94.00 Aligned_cols=97 Identities=10% Similarity=0.130 Sum_probs=68.4
Q ss_pred EeeccCCCCccchh-hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 2 VLFHGFGASVFSWN-RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 2 vllHG~~~~~~~w~-~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
|++.-+.+...... .+++.|.+ |+.|+..|+.--+.... ....++++++++.+.++++++|.
T Consensus 106 LiV~Pl~g~~~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~---------------~~~~f~ldDYi~~l~~~i~~~G~ 168 (406)
T TIGR01849 106 LIVAPMSGHYATLLRSTVEALLP--DHDVYITDWVNARMVPL---------------SAGKFDLEDYIDYLIEFIRFLGP 168 (406)
T ss_pred EEEcCCchHHHHHHHHHHHHHhC--CCcEEEEeCCCCCCCch---------------hcCCCCHHHHHHHHHHHHHHhCC
Confidence 33433433333333 45667765 78999999985443210 12357888888778899999987
Q ss_pred cceEEEEeChhHHHHHHHHhhc-----hhhhhhheeecccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEA-----PERVAALILIAPAI 116 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvli~p~~ 116 (346)
+ ++|+|+++||..++.+++.+ |+++++++++++++
T Consensus 169 ~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PI 208 (406)
T TIGR01849 169 D-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPI 208 (406)
T ss_pred C-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCc
Confidence 7 99999999999977665544 77899999997653
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.09 E-value=3.6e-09 Score=95.70 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=60.9
Q ss_pred CEeeccCCCCccchhhhH-HHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH--
Q 019089 1 MVLFHGFGASVFSWNRAM-KPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI-- 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~-~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~-- 77 (346)
||++-|+-+-...+...+ +.|.. .|+.++++|.||.|.|..-+.. ..++ .....++..+..
T Consensus 193 VIv~gGlDs~qeD~~~l~~~~l~~-rGiA~LtvDmPG~G~s~~~~l~-------------~D~~--~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 193 VIVCGGLDSLQEDLYRLFRDYLAP-RGIAMLTVDMPGQGESPKWPLT-------------QDSS--RLHQAVLDYLASRP 256 (411)
T ss_dssp EEEE--TTS-GGGGHHHHHCCCHH-CT-EEEEE--TTSGGGTTT-S--------------S-CC--HHHHHHHHHHHHST
T ss_pred EEEeCCcchhHHHHHHHHHHHHHh-CCCEEEEEccCCCcccccCCCC-------------cCHH--HHHHHHHHHHhcCC
Confidence 456666777665544444 44554 5899999999999998532211 1122 112223333333
Q ss_pred -hcccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 78 -LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 78 -l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++-.++.++|-|+||++|.++|..+++|++++|..++++
T Consensus 257 ~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 257 WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred ccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 356789999999999999999999999999999998754
No 98
>COG0400 Predicted esterase [General function prediction only]
Probab=99.07 E-value=3e-09 Score=88.41 Aligned_cols=104 Identities=14% Similarity=0.128 Sum_probs=62.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHH-------HHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFS-------VLATLY 73 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~-------~~~~~~ 73 (346)
|||+||+|++...+-.....+.. ++.++.+ || .+....... - -.......|+.++. +..+.+
T Consensus 21 iilLHG~Ggde~~~~~~~~~~~P--~~~~is~--rG--~v~~~g~~~----~-f~~~~~~~~d~edl~~~~~~~~~~l~~ 89 (207)
T COG0400 21 LILLHGLGGDELDLVPLPELILP--NATLVSP--RG--PVAENGGPR----F-FRRYDEGSFDQEDLDLETEKLAEFLEE 89 (207)
T ss_pred EEEEecCCCChhhhhhhhhhcCC--CCeEEcC--CC--CccccCccc----c-eeecCCCccchhhHHHHHHHHHHHHHH
Confidence 68999999998777663333332 2344433 32 222110000 0 00011223333322 222444
Q ss_pred HHHHhcc--cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 74 FIDILAA--EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 74 ll~~l~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+.++.++ ++++++|.|=|+++++.+.+++|+.++++++.++.
T Consensus 90 ~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~ 133 (207)
T COG0400 90 LAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGM 133 (207)
T ss_pred HHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCc
Confidence 4455565 78999999999999999999999999999999864
No 99
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.98 E-value=2.1e-09 Score=91.34 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=65.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhh-------CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH---HH-HH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKT-------TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMA---FS-VL 69 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~-------~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~---~~-~~ 69 (346)
||||||.+++...|+.+...+.+. ..++++++|+......- ....+. +. ..
T Consensus 7 VlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~------------------~g~~l~~q~~~~~~ 68 (225)
T PF07819_consen 7 VLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF------------------HGRTLQRQAEFLAE 68 (225)
T ss_pred EEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc------------------ccccHHHHHHHHHH
Confidence 699999999999888776555221 13678999987643211 011111 12 22
Q ss_pred HHHHHHHHh-----cccceEEEEeChhHHHHHHHHhhc---hhhhhhheeeccccc
Q 019089 70 ATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEA---PERVAALILIAPAIL 117 (346)
Q Consensus 70 ~~~~ll~~l-----~~~~~~lvGhS~GG~ia~~~a~~~---p~~v~~lvli~p~~~ 117 (346)
.+..+++.. +.++++||||||||.++..+.... ++.|+.+|.+++|..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 233444444 567899999999999998776543 357999999987643
No 100
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.98 E-value=5e-08 Score=91.79 Aligned_cols=60 Identities=25% Similarity=0.403 Sum_probs=47.6
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC-----------------------------------CCeEEEecCCCCCCchh
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP-----------------------------------GSTFEVIKNCGHVPQEE 315 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p-----------------------------------~~~~~~i~~~GH~~~~e 315 (346)
.++||+..|+.|.+++....+.+.+.++ +.+++.|.+|||+++.|
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 5899999999999998765554443221 33456677999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 019089 316 KVEEFVSIVARFLQR 330 (346)
Q Consensus 316 ~pe~~~~~i~~fl~~ 330 (346)
+|+...+.+.+|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999854
No 101
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.89 E-value=2.7e-09 Score=74.65 Aligned_cols=61 Identities=25% Similarity=0.266 Sum_probs=48.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
|+++||++.++..|..++..|.+ .||.|+++|+||||+|+.... ..-+++..++|+..+++
T Consensus 19 v~i~HG~~eh~~ry~~~a~~L~~-~G~~V~~~D~rGhG~S~g~rg--------------~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 19 VVIVHGFGEHSGRYAHLAEFLAE-QGYAVFAYDHRGHGRSEGKRG--------------HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHh-CCCEEEEECCCcCCCCCCccc--------------ccCCHHHHHHHHHHHhC
Confidence 68999999999999999999987 589999999999999974321 11245677777777653
No 102
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=6.6e-08 Score=81.31 Aligned_cols=112 Identities=21% Similarity=0.230 Sum_probs=68.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCC----CCCC-CCCCCCCCCC-CCCCCchhHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSR----VFPF-QQPTPDTENK-KPLNPYSMAFSVLATLYF 74 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~----~~~~-~~~~~~~~~~-~~~~~ys~~~~~~~~~~l 74 (346)
||-.||+++....|...+ .++. .||-|+.+|-||.|.|+. ++.+ +.|.-.+.-. +..+.|-+.....|+..+
T Consensus 86 vV~fhGY~g~~g~~~~~l-~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~a 163 (321)
T COG3458 86 VVQFHGYGGRGGEWHDML-HWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRA 163 (321)
T ss_pred EEEEeeccCCCCCccccc-cccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHH
Confidence 466799999998885543 3333 489999999999998742 1111 1110000000 002234333333333333
Q ss_pred HH------HhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 75 ID------ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 75 l~------~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++ +.+-+++.+-|.|-||.+++..++. ..+|++++.+=|.
T Consensus 164 ve~~~sl~~vde~Ri~v~G~SqGGglalaaaal-~~rik~~~~~~Pf 209 (321)
T COG3458 164 VEILASLDEVDEERIGVTGGSQGGGLALAAAAL-DPRIKAVVADYPF 209 (321)
T ss_pred HHHHhccCccchhheEEeccccCchhhhhhhhc-Chhhhcccccccc
Confidence 33 3456789999999999999966655 4589998887653
No 103
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.85 E-value=1.1e-07 Score=80.36 Aligned_cols=95 Identities=26% Similarity=0.314 Sum_probs=57.8
Q ss_pred CEeeccCCCC---ccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc-hhHHHH-HHHHHHH
Q 019089 1 MVLFHGFGAS---VFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY-SMAFSV-LATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~---~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y-s~~~~~-~~~~~ll 75 (346)
||++||-+-. ..........+.+..|+.|+.+|+|=.... .| +..+++ ..+..++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~--------------------~~p~~~~D~~~a~~~l~ 60 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA--------------------PFPAALEDVKAAYRWLL 60 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS--------------------STTHHHHHHHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc--------------------cccccccccccceeeec
Confidence 6899994332 222234566676656899999999942111 11 122222 2233444
Q ss_pred HH-----hcccceEEEEeChhHHHHHHHHhhchhh----hhhheeeccc
Q 019089 76 DI-----LAAEKAILVGHSAGALVAVNSYFEAPER----VAALILIAPA 115 (346)
Q Consensus 76 ~~-----l~~~~~~lvGhS~GG~ia~~~a~~~p~~----v~~lvli~p~ 115 (346)
++ .+.++++|+|+|-||.+++.++....+. ++++++++|.
T Consensus 61 ~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 61 KNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred cccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 44 4567899999999999999999865553 8999999874
No 104
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.85 E-value=3e-08 Score=88.66 Aligned_cols=100 Identities=13% Similarity=0.136 Sum_probs=68.9
Q ss_pred CEeeccCCCCccchhh-----hHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNR-----AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~~~~w~~-----~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
+|++|-+...-+.|+- .+..|.+ .|+.|+.+|+++=..+.. .+....|-.+.....+....
T Consensus 110 lLiVpP~iNk~yi~Dl~~~~s~V~~l~~-~g~~vfvIsw~nPd~~~~-------------~~~~edYi~e~l~~aid~v~ 175 (445)
T COG3243 110 LLIVPPWINKFYILDLSPEKSLVRWLLE-QGLDVFVISWRNPDASLA-------------AKNLEDYILEGLSEAIDTVK 175 (445)
T ss_pred eEeeccccCceeEEeCCCCccHHHHHHH-cCCceEEEeccCchHhhh-------------hccHHHHHHHHHHHHHHHHH
Confidence 3566666666666652 2334444 478999999986444422 11223344444445555666
Q ss_pred HHhcccceEEEEeChhHHHHHHHHhhchhh-hhhheeecc
Q 019089 76 DILAAEKAILVGHSAGALVAVNSYFEAPER-VAALILIAP 114 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~-v~~lvli~p 114 (346)
+..+.++++++||+.||+++..+++.++.+ |++++++.+
T Consensus 176 ~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts 215 (445)
T COG3243 176 DITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTS 215 (445)
T ss_pred HHhCccccceeeEecchHHHHHHHHhhhhcccccceeeec
Confidence 677889999999999999999888888888 999999864
No 105
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.84 E-value=1.2e-07 Score=81.29 Aligned_cols=105 Identities=20% Similarity=0.127 Sum_probs=66.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCC-CCCCCCCCCCCCCCCCCCCCCC--CCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF-GLTSRVFPFQQPTPDTENKKPL--NPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~--~~ys~~~~~~~~~~ll~~ 77 (346)
||++|+..+-....+.+..+|+. .||-|++||+-+. |.+.... . .+ ...... ...+......++.+.++.
T Consensus 30 VIv~hei~Gl~~~i~~~a~rlA~-~Gy~v~~Pdl~~~~~~~~~~~-~-~~----~~~~~~~~~~~~~~~~~~d~~a~~~~ 102 (236)
T COG0412 30 VIVLHEIFGLNPHIRDVARRLAK-AGYVVLAPDLYGRQGDPTDIE-D-EP----AELETGLVERVDPAEVLADIDAALDY 102 (236)
T ss_pred EEEEecccCCchHHHHHHHHHHh-CCcEEEechhhccCCCCCccc-c-cH----HHHhhhhhccCCHHHHHHHHHHHHHH
Confidence 68999988877788889999987 5899999999873 3332111 0 00 000000 001112223344444444
Q ss_pred h---c---ccceEEEEeChhHHHHHHHHhhchhhhhhheeec
Q 019089 78 L---A---AEKAILVGHSAGALVAVNSYFEAPERVAALILIA 113 (346)
Q Consensus 78 l---~---~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~ 113 (346)
| . .+++.++|.||||.+++.++.+.| .|++.+..-
T Consensus 103 L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fy 143 (236)
T COG0412 103 LARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFY 143 (236)
T ss_pred HHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEec
Confidence 4 3 567999999999999999888776 666666553
No 106
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.83 E-value=2.1e-07 Score=92.56 Aligned_cols=68 Identities=21% Similarity=0.250 Sum_probs=49.3
Q ss_pred hhcccCCccEEEEEeCCCCCcChHHHHHHHHhCC----CCeEEEecCCCCCCc-hhCHHHHHHHHHHHHHHHhC
Q 019089 265 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQ-EEKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 265 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~GH~~~-~e~pe~~~~~i~~fl~~~~~ 333 (346)
..+.+|++|+|+|+|.+|..++..++.++.+.+. ..++. +...+|..+ ...+..+.+.+.+|+.+.+.
T Consensus 449 ~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~-l~~g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 449 KDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLF-LHQGGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred hHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEE-EeCCCccCCCchhHHHHHHHHHHHHHhccc
Confidence 4567899999999999999999877766655442 34554 445688543 34567888888999987653
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.82 E-value=3.2e-08 Score=85.97 Aligned_cols=96 Identities=20% Similarity=0.267 Sum_probs=55.7
Q ss_pred CEeeccCCCCccch---hhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSW---NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w---~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
||||.|++..-..- ..++..|. ..++.|+-+-++ |+.. -.+..+++.+++++..+++.
T Consensus 36 llfIGGLtDGl~tvpY~~~La~aL~-~~~wsl~q~~Ls----SSy~--------------G~G~~SL~~D~~eI~~~v~y 96 (303)
T PF08538_consen 36 LLFIGGLTDGLLTVPYLPDLAEALE-ETGWSLFQVQLS----SSYS--------------GWGTSSLDRDVEEIAQLVEY 96 (303)
T ss_dssp EEEE--TT--TT-STCHHHHHHHHT--TT-EEEEE--G----GGBT--------------TS-S--HHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCchHHHHHHHhc-cCCeEEEEEEec----CccC--------------CcCcchhhhHHHHHHHHHHH
Confidence 68999998876542 23334442 247899988765 2211 11234677777777766665
Q ss_pred h--------cccceEEEEeChhHHHHHHHHhhch-----hhhhhheeeccc
Q 019089 78 L--------AAEKAILVGHSAGALVAVNSYFEAP-----ERVAALILIAPA 115 (346)
Q Consensus 78 l--------~~~~~~lvGhS~GG~ia~~~a~~~p-----~~v~~lvli~p~ 115 (346)
+ +.++++|+|||-||--++.+..... ..|.++||-+|.
T Consensus 97 lr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApV 147 (303)
T PF08538_consen 97 LRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPV 147 (303)
T ss_dssp HHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE-
T ss_pred HHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCC
Confidence 4 2458999999999999998887542 679999998874
No 108
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.82 E-value=1.3e-07 Score=81.35 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=61.4
Q ss_pred CEeeccCCCCccchhhhHHHHh-hhC-CCeEEEEcCCCCCCCC--CCCCC--CCCCCCCCCCCCCCCc--hhHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLA-KTT-SSKVLAFDRPAFGLTS--RVFPF--QQPTPDTENKKPLNPY--SMAFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~-~~~-~~~via~Dl~G~G~S~--~~~~~--~~~~~~~~~~~~~~~y--s~~~~~~~~~ 72 (346)
.|||||++++...+...+..+. +.. ...++..+----|.-. ..-.. .-|.-...- .+.. +....+..+.
T Consensus 14 TifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F---~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 14 TIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNF---EDNRNANYKKQAKWLK 90 (255)
T ss_dssp EEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEE---SSTT-CHHHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEe---cCCCcCCHHHHHHHHH
Confidence 3899999999999999999996 432 2344444433334211 00000 000000000 0111 3344444444
Q ss_pred HHHHH----hcccceEEEEeChhHHHHHHHHhhchh-----hhhhheeeccc
Q 019089 73 YFIDI----LAAEKAILVGHSAGALVAVNSYFEAPE-----RVAALILIAPA 115 (346)
Q Consensus 73 ~ll~~----l~~~~~~lvGhS~GG~ia~~~a~~~p~-----~v~~lvli~p~ 115 (346)
.+|.. .+++++.+|||||||+++..++..+-. +|.++|.|+.+
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~p 142 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGP 142 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccc
Confidence 44444 478999999999999999988877432 68999999864
No 109
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.80 E-value=2.1e-07 Score=74.43 Aligned_cols=58 Identities=26% Similarity=0.368 Sum_probs=45.3
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHH
Q 019089 270 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 329 (346)
Q Consensus 270 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~ 329 (346)
...|+++|+|+.|.+++....-+.++.. ..+++.+++++||.+- +-..+.+.+.+|+.
T Consensus 148 ~P~~~lvi~g~~Ddvv~l~~~l~~~~~~-~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 148 CPSPGLVIQGDADDVVDLVAVLKWQESI-KITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred CCCCceeEecChhhhhcHHHHHHhhcCC-CCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 3579999999999998887777776663 4567788999999774 45557888888884
No 110
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.79 E-value=1.2e-08 Score=94.57 Aligned_cols=92 Identities=18% Similarity=0.105 Sum_probs=65.1
Q ss_pred CCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcccceEEEEe
Q 019089 9 ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGH 88 (346)
Q Consensus 9 ~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~~~~~lvGh 88 (346)
.+...|..+++.|.+ .|| +...|++|+|.+-+... .....+......+.++.+..+.++++||||
T Consensus 105 ~~~~~~~~li~~L~~-~GY-~~~~dL~g~gYDwR~~~-------------~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGH 169 (440)
T PLN02733 105 DEVYYFHDMIEQLIK-WGY-KEGKTLFGFGYDFRQSN-------------RLPETMDGLKKKLETVYKASGGKKVNIISH 169 (440)
T ss_pred chHHHHHHHHHHHHH-cCC-ccCCCcccCCCCccccc-------------cHHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 455788889999987 465 55899999998753210 001223333333444555667889999999
Q ss_pred ChhHHHHHHHHhhchhh----hhhheeeccc
Q 019089 89 SAGALVAVNSYFEAPER----VAALILIAPA 115 (346)
Q Consensus 89 S~GG~ia~~~a~~~p~~----v~~lvli~p~ 115 (346)
||||.+++.++..+|+. |+++|.++++
T Consensus 170 SMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 170 SMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 99999999999888865 6888898764
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.74 E-value=2.9e-07 Score=72.76 Aligned_cols=60 Identities=28% Similarity=0.396 Sum_probs=44.9
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCch---hCHHHHHHHHHHHHHH
Q 019089 270 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQE---EKVEEFVSIVARFLQR 330 (346)
Q Consensus 270 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~---e~pe~~~~~i~~fl~~ 330 (346)
+..|.+++..++|+.++.+.++.+++.. ++.++.+.++||+--. +...+....+.+|+.+
T Consensus 116 lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 116 LPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 3468999999999999999999999988 4566777788996544 3334455556666554
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.73 E-value=9.8e-07 Score=68.39 Aligned_cols=102 Identities=25% Similarity=0.234 Sum_probs=66.2
Q ss_pred CEeeccCCCC--ccchhhhHHHHhhhCCCeEEEEcCCCCCCC--CCCCCCCCCCCCCCCCCCCCCch-hHHHHHHHHHHH
Q 019089 1 MVLFHGFGAS--VFSWNRAMKPLAKTTSSKVLAFDRPAFGLT--SRVFPFQQPTPDTENKKPLNPYS-MAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~~--~~~w~~~~~~l~~~~~~~via~Dl~G~G~S--~~~~~~~~~~~~~~~~~~~~~ys-~~~~~~~~~~ll 75 (346)
|||-||-+.+ +-....+...|.. .|+.|..++++-.-.- +...+ |...-+ ..++...+..+.
T Consensus 17 ilLaHGAGasmdSt~m~~~a~~la~-~G~~vaRfefpYma~Rrtg~rkP------------p~~~~t~~~~~~~~~aql~ 83 (213)
T COG3571 17 ILLAHGAGASMDSTSMTAVAAALAR-RGWLVARFEFPYMAARRTGRRKP------------PPGSGTLNPEYIVAIAQLR 83 (213)
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHh-CceeEEEeecchhhhccccCCCC------------cCccccCCHHHHHHHHHHH
Confidence 6889996654 5566677777776 5889999887654321 11000 000111 123333455555
Q ss_pred HHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 76 DILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 76 ~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
..+.-.+.++-||||||.++-++|..-...|.++++++=+
T Consensus 84 ~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYP 123 (213)
T COG3571 84 AGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYP 123 (213)
T ss_pred hcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCc
Confidence 5566668999999999999999987766669999998743
No 113
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.68 E-value=2.5e-07 Score=76.14 Aligned_cols=65 Identities=9% Similarity=0.148 Sum_probs=51.4
Q ss_pred HhhcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeE--EEecC----CCCCCchhCH-HHHHHHHHHHH
Q 019089 264 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTF--EVIKN----CGHVPQEEKV-EEFVSIVARFL 328 (346)
Q Consensus 264 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~--~~i~~----~GH~~~~e~p-e~~~~~i~~fl 328 (346)
.+.++++++||.++...+|..+|++..+.+...++|+.+ ..++. .||+...-+| |...+.+.+|+
T Consensus 209 ~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 209 RQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 345678899999999999999999999999999988754 33333 4999998887 77666666554
No 114
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.67 E-value=5.9e-08 Score=82.75 Aligned_cols=95 Identities=24% Similarity=0.291 Sum_probs=66.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH----
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID---- 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~---- 76 (346)
+||+|||......|..++.+++. .||-|+++|+...+..... . + ...+..++.++.
T Consensus 20 v~f~~G~~~~~s~Ys~ll~hvAS-hGyIVV~~d~~~~~~~~~~----------~------~---~~~~~~vi~Wl~~~L~ 79 (259)
T PF12740_consen 20 VLFLHGFLLINSWYSQLLEHVAS-HGYIVVAPDLYSIGGPDDT----------D------E---VASAAEVIDWLAKGLE 79 (259)
T ss_pred EEEeCCcCCCHHHHHHHHHHHHh-CceEEEEecccccCCCCcc----------h------h---HHHHHHHHHHHHhcch
Confidence 58999999666666678888876 4899999997664431100 0 0 011111222221
Q ss_pred -H------hcccceEEEEeChhHHHHHHHHhhc-----hhhhhhheeeccc
Q 019089 77 -I------LAAEKAILVGHSAGALVAVNSYFEA-----PERVAALILIAPA 115 (346)
Q Consensus 77 -~------l~~~~~~lvGhS~GG~ia~~~a~~~-----p~~v~~lvli~p~ 115 (346)
. .+..++.|.|||-||-++..+++.+ +.+++++++++|.
T Consensus 80 ~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 80 SKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred hhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 1 1456899999999999999999987 6799999999985
No 115
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.66 E-value=2.8e-06 Score=77.56 Aligned_cols=112 Identities=23% Similarity=0.261 Sum_probs=76.6
Q ss_pred CEeeccCCCCccchhhh-----HHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHH-HHHHH
Q 019089 1 MVLFHGFGASVFSWNRA-----MKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVL-ATLYF 74 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~-----~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~-~~~~l 74 (346)
|+|.||+.+++..|-.. ++.+....||.|..-..||--.|-.-... . +.. .+..=.+|+.+.+. |+-+.
T Consensus 76 Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l-~--~~~--~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 76 VLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKL-S--PSS--DKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred EEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhccc-C--CcC--CcceeecchhhhhhcCHHHH
Confidence 58999999999999754 34444457999999999996666321100 0 000 01111356655443 33344
Q ss_pred ----HHHhcccceEEEEeChhHHHHHHHHhhchh---hhhhheeeccccc
Q 019089 75 ----IDILAAEKAILVGHSAGALVAVNSYFEAPE---RVAALILIAPAIL 117 (346)
Q Consensus 75 ----l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvli~p~~~ 117 (346)
++..+-++++.||||-|+.+.......+|+ +|+.+++++|+++
T Consensus 151 IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 151 IDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred HHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 444577899999999999999988877764 7999999998763
No 116
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.66 E-value=1.1e-07 Score=80.27 Aligned_cols=49 Identities=29% Similarity=0.390 Sum_probs=33.2
Q ss_pred cCCccEEEEEeCCCCCcChHHHHHHHHhCCC-CeEEEecCCCCCCchhCHH
Q 019089 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVE 318 (346)
Q Consensus 269 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~GH~~~~e~pe 318 (346)
+|++|+|.|+|++|.+++++.++.+.+.+.+ .+++..+ .||.++...++
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~~ 208 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKED 208 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HHH
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChhh
Confidence 5689999999999999999889999998877 6666654 69998876554
No 117
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.61 E-value=7.1e-07 Score=74.15 Aligned_cols=86 Identities=16% Similarity=0.262 Sum_probs=52.2
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCC-CCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH---HHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAF-GLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA---TLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~-G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~---~~~ll~ 76 (346)
||+..||+.....+..++.+|+. .||+||.+|-.-| |.|+.. ++.|+|.....+ +..+++
T Consensus 33 iliA~Gf~rrmdh~agLA~YL~~-NGFhViRyDsl~HvGlSsG~---------------I~eftms~g~~sL~~V~dwl~ 96 (294)
T PF02273_consen 33 ILIAPGFARRMDHFAGLAEYLSA-NGFHVIRYDSLNHVGLSSGD---------------INEFTMSIGKASLLTVIDWLA 96 (294)
T ss_dssp EEEE-TT-GGGGGGHHHHHHHHT-TT--EEEE---B----------------------------HHHHHHHHHHHHHHHH
T ss_pred EEEecchhHHHHHHHHHHHHHhh-CCeEEEeccccccccCCCCC---------------hhhcchHHhHHHHHHHHHHHH
Confidence 57889999999999999999987 6999999998766 666531 457887655444 444555
Q ss_pred HhcccceEEEEeChhHHHHHHHHhhc
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
.-|.+++-||..|+.|.||+..|.+.
T Consensus 97 ~~g~~~~GLIAaSLSaRIAy~Va~~i 122 (294)
T PF02273_consen 97 TRGIRRIGLIAASLSARIAYEVAADI 122 (294)
T ss_dssp HTT---EEEEEETTHHHHHHHHTTTS
T ss_pred hcCCCcchhhhhhhhHHHHHHHhhcc
Confidence 55788999999999999999999743
No 118
>PRK04940 hypothetical protein; Provisional
Probab=98.58 E-value=5.1e-06 Score=67.03 Aligned_cols=52 Identities=10% Similarity=0.125 Sum_probs=35.7
Q ss_pred cEEEEEeCCCCCcChHHHHHHHHhCCCC-eEEEecCCCCCCchhCHHHHHHHHHHHHH
Q 019089 273 PVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQ 329 (346)
Q Consensus 273 Pvl~i~G~~D~~~~~~~~~~~~~~~p~~-~~~~i~~~GH~~~~e~pe~~~~~i~~fl~ 329 (346)
.++++..+.|.+..... +.+.+.++ ++.+.+|+.|-. +.-+.....|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~---a~~~y~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQR---TAEELHPYYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHH---HHHHhccCceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 36999999999888654 44555666 777777766632 234447778888874
No 119
>PRK10115 protease 2; Provisional
Probab=98.57 E-value=1.6e-06 Score=85.68 Aligned_cols=107 Identities=12% Similarity=0.002 Sum_probs=65.9
Q ss_pred CEeeccCCCCcc--chhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH-
Q 019089 1 MVLFHGFGASVF--SWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI- 77 (346)
Q Consensus 1 ivllHG~~~~~~--~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~- 77 (346)
||.+||-++.+. .|......|.. .||-|+.+..||-|.=+..-.. ... .....-++++....+..++++
T Consensus 448 ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~------~g~-~~~k~~~~~D~~a~~~~Lv~~g 519 (686)
T PRK10115 448 LVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWYE------DGK-FLKKKNTFNDYLDACDALLKLG 519 (686)
T ss_pred EEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHHH------hhh-hhcCCCcHHHHHHHHHHHHHcC
Confidence 578899666653 34444445655 5899999999996643311000 000 000011222222222233332
Q ss_pred -hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 78 -LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 78 -l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+.+++.+.|.|.||+++...+.++|++++++|...|.
T Consensus 520 ~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 520 YGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred CCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 13578999999999999998888899999999998763
No 120
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.55 E-value=1.7e-07 Score=78.67 Aligned_cols=95 Identities=20% Similarity=0.228 Sum_probs=65.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH----H
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI----D 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll----~ 76 (346)
|+|+|||....+.|..++.+++. .||=|+|+++-.- .. + +.+.....+..+..++ .
T Consensus 49 ilF~HG~~l~ns~Ys~lL~HIAS-HGfIVVAPQl~~~--~~-p----------------~~~~Ei~~aa~V~~WL~~gL~ 108 (307)
T PF07224_consen 49 ILFLHGFNLYNSFYSQLLAHIAS-HGFIVVAPQLYTL--FP-P----------------DGQDEIKSAASVINWLPEGLQ 108 (307)
T ss_pred EEEeechhhhhHHHHHHHHHHhh-cCeEEEechhhcc--cC-C----------------CchHHHHHHHHHHHHHHhhhh
Confidence 68999999998888888888876 4899999998741 11 1 1111111111122222 1
Q ss_pred Hh-------cccceEEEEeChhHHHHHHHHhhch--hhhhhheeeccc
Q 019089 77 IL-------AAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPA 115 (346)
Q Consensus 77 ~l-------~~~~~~lvGhS~GG~ia~~~a~~~p--~~v~~lvli~p~ 115 (346)
++ ++.++.++|||+||-+|..+|+.+- -.+.+||.++|.
T Consensus 109 ~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 109 HVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred hhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 11 4679999999999999999999774 347888888875
No 121
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.53 E-value=2.7e-07 Score=78.90 Aligned_cols=102 Identities=27% Similarity=0.330 Sum_probs=63.0
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCC--eEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSS--KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~--~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
+||||||..+...--.-+..+....++ .+|.+.||..|.-.... .+ ..+.......+..+++.+
T Consensus 21 lvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~---------~d-----~~~a~~s~~~l~~~L~~L 86 (233)
T PF05990_consen 21 LVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYF---------YD-----RESARFSGPALARFLRDL 86 (233)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhh---------hh-----hhhHHHHHHHHHHHHHHH
Confidence 589999999864433333444443444 69999999887522100 00 011112223344455443
Q ss_pred ----cccceEEEEeChhHHHHHHHHhh----c-----hhhhhhheeecccc
Q 019089 79 ----AAEKAILVGHSAGALVAVNSYFE----A-----PERVAALILIAPAI 116 (346)
Q Consensus 79 ----~~~~~~lvGhS~GG~ia~~~a~~----~-----p~~v~~lvli~p~~ 116 (346)
+.++++|++||||+.+.+..... . ..++..++|++|.+
T Consensus 87 ~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 87 ARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred HhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 57899999999999999975532 1 24678888888643
No 122
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.48 E-value=3.7e-07 Score=76.67 Aligned_cols=83 Identities=27% Similarity=0.225 Sum_probs=47.8
Q ss_pred CEeeccCCC-CccchhhhHHHHhhhCCCe---EEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH-
Q 019089 1 MVLFHGFGA-SVFSWNRAMKPLAKTTSSK---VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI- 75 (346)
Q Consensus 1 ivllHG~~~-~~~~w~~~~~~l~~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll- 75 (346)
|||+||..+ ....|....+.|.+ .||. |+++++-....+.... ......+.+..+.+|+
T Consensus 4 VVlVHG~~~~~~~~w~~~~~~l~~-~GY~~~~vya~tyg~~~~~~~~~---------------~~~~~~~~~~~l~~fI~ 67 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNWSTLAPYLKA-AGYCDSEVYALTYGSGNGSPSVQ---------------NAHMSCESAKQLRAFID 67 (219)
T ss_dssp EEEE--TTTTTCGGCCHHHHHHHH-TT--CCCEEEE--S-CCHHTHHH---------------HHHB-HHHHHHHHHHHH
T ss_pred EEEECCCCcchhhCHHHHHHHHHH-cCCCcceeEeccCCCCCCCCccc---------------ccccchhhHHHHHHHHH
Confidence 699999998 66999999999987 5787 8999974333211100 0000112223344444
Q ss_pred ---HHhcccceEEEEeChhHHHHHHHHh
Q 019089 76 ---DILAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 76 ---~~l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
...+- ||.||||||||+++-.+..
T Consensus 68 ~Vl~~TGa-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 68 AVLAYTGA-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHT---EEEEEETCHHHHHHHHHH
T ss_pred HHHHhhCC-EEEEEEcCCcCHHHHHHHH
Confidence 45577 9999999999999986654
No 123
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.42 E-value=1.5e-06 Score=73.35 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=36.5
Q ss_pred HHHHHHHHHHh---cccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 68 VLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 68 ~~~~~~ll~~l---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
.+..++++... +.+++.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 34445555544 3468999999999999999999998 999999998754
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.41 E-value=3.4e-06 Score=68.20 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=49.3
Q ss_pred hcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHHH
Q 019089 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 266 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
.+..+++|+|+++|.+|.-.-.+..+.+......+++.+++|.+|+-.+|+--.--.-+-.|+++
T Consensus 202 ~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~ 266 (270)
T KOG4627|consen 202 EYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRN 266 (270)
T ss_pred HhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHH
Confidence 45678899999999999866677788888888889999999999998887654322333344443
No 125
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.39 E-value=2.4e-07 Score=83.18 Aligned_cols=96 Identities=25% Similarity=0.329 Sum_probs=57.8
Q ss_pred CEeeccCCCCc--cchhhh-HHHHhhh--CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhH-----HHHHH
Q 019089 1 MVLFHGFGASV--FSWNRA-MKPLAKT--TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMA-----FSVLA 70 (346)
Q Consensus 1 ivllHG~~~~~--~~w~~~-~~~l~~~--~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~-----~~~~~ 70 (346)
+|++|||.++. ..|... ...+.+. .++.||++|+...- + ..|... .....
T Consensus 74 ~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a-~-------------------~~Y~~a~~n~~~vg~~ 133 (331)
T PF00151_consen 74 VIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGA-S-------------------NNYPQAVANTRLVGRQ 133 (331)
T ss_dssp EEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHH-S-------------------S-HHHHHHHHHHHHHH
T ss_pred EEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhc-c-------------------ccccchhhhHHHHHHH
Confidence 48999999998 567654 3435443 46899999986321 1 124321 11222
Q ss_pred HHHHHHH------hcccceEEEEeChhHHHHHHHHhhchh--hhhhheeecccc
Q 019089 71 TLYFIDI------LAAEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPAI 116 (346)
Q Consensus 71 ~~~ll~~------l~~~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvli~p~~ 116 (346)
+..+|+. +..++++|||||+|+.||-..+..... +|.+++-++|+.
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAg 187 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAG 187 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccc
Confidence 3333333 246889999999999999988877766 899999999875
No 126
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.38 E-value=1.2e-06 Score=75.35 Aligned_cols=97 Identities=24% Similarity=0.252 Sum_probs=73.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
++|+|+..+...+|..+...|... .+|+..+.||+|.-... .-++++.+...++-|.....
T Consensus 3 LF~fhp~~G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~~~~-----------------~~~l~~~a~~yv~~Ir~~QP 63 (257)
T COG3319 3 LFCFHPAGGSVLAYAPLAAALGPL--LPVYGLQAPGYGAGEQP-----------------FASLDDMAAAYVAAIRRVQP 63 (257)
T ss_pred EEEEcCCCCcHHHHHHHHHHhccC--ceeeccccCcccccccc-----------------cCCHHHHHHHHHHHHHHhCC
Confidence 589999999999998888888753 68999999999853211 12455556655555555543
Q ss_pred -cceEEEEeChhHHHHHHHHhhc---hhhhhhheeecccc
Q 019089 81 -EKAILVGHSAGALVAVNSYFEA---PERVAALILIAPAI 116 (346)
Q Consensus 81 -~~~~lvGhS~GG~ia~~~a~~~---p~~v~~lvli~p~~ 116 (346)
.+++|+|||+||.+|+.+|.+- -+.|..++++++..
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 4799999999999999999763 35789999998753
No 127
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.35 E-value=7.7e-05 Score=62.36 Aligned_cols=110 Identities=18% Similarity=0.195 Sum_probs=78.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCC--CeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTS--SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
|++|.|.|+....|..++..|..... .+++.+-..||-.-.... + ++...+..+-|++.++++-=++|++..
T Consensus 32 i~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl-~-----~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 32 IVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASL-R-----EDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred EEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccc-c-----cccccccccccchhhHHHHHHHHHHHh
Confidence 57899999999999988888755332 568888888877543110 0 011112234689999998888898875
Q ss_pred --cccceEEEEeChhHHHHHHHHhh--chhhhhhheeecccc
Q 019089 79 --AAEKAILVGHSAGALVAVNSYFE--APERVAALILIAPAI 116 (346)
Q Consensus 79 --~~~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~p~~ 116 (346)
...|++++|||-|+++.+.+... .--+|.+++++-|.+
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 34689999999999999988863 234578888887653
No 128
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.35 E-value=2.5e-06 Score=71.53 Aligned_cols=95 Identities=24% Similarity=0.267 Sum_probs=65.6
Q ss_pred EeeccCC--CCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHh
Q 019089 2 VLFHGFG--ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI-DIL 78 (346)
Q Consensus 2 vllHG~~--~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll-~~l 78 (346)
+++|+-+ ++...|..+...|.. +++|+++|++|+|.+... ..+....+......+ +..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~--~~~v~~~~~~g~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~ 61 (212)
T smart00824 1 ICFPSTAAPSGPHEYARLAAALRG--RRDVSALPLPGFGPGEPL-----------------PASADALVEAQAEAVLRAA 61 (212)
T ss_pred CccCCCCCCCcHHHHHHHHHhcCC--CccEEEecCCCCCCCCCC-----------------CCCHHHHHHHHHHHHHHhc
Confidence 3566644 677888888888865 468999999999865421 112333333333333 334
Q ss_pred cccceEEEEeChhHHHHHHHHhhc---hhhhhhheeeccc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEA---PERVAALILIAPA 115 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~---p~~v~~lvli~p~ 115 (346)
+..+++++||||||.++..++.+. ++.+.+++++++.
T Consensus 62 ~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 62 GGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 466899999999999999888763 4668899888753
No 129
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.34 E-value=8.3e-06 Score=72.22 Aligned_cols=56 Identities=21% Similarity=0.344 Sum_probs=47.5
Q ss_pred cEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCC-CCchhCHHHHHHHHHHHHH
Q 019089 273 PVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGH-VPQEEKVEEFVSIVARFLQ 329 (346)
Q Consensus 273 Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH-~~~~e~pe~~~~~i~~fl~ 329 (346)
.+.++.+++|..+|.+....+.+..|++++.++++ || ..++-+.+.|.+.|.+-++
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 48999999999999988889999999999999976 99 5566777888888876543
No 130
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.31 E-value=7.4e-07 Score=79.03 Aligned_cols=55 Identities=24% Similarity=0.361 Sum_probs=45.6
Q ss_pred hcccCCccEEEEEeCCCCCcChH-HHHHHHHhCCCC--eEEEecCCCCCCchhCHHHH
Q 019089 266 RLHEISCPVLIVTGDTDRIVPSW-NAERLSRAIPGS--TFEVIKNCGHVPQEEKVEEF 320 (346)
Q Consensus 266 ~l~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~p~~--~~~~i~~~GH~~~~e~pe~~ 320 (346)
.+.++++|++++.|..|...|.. ...+-...+|+. .+.+++++.|+-++|-.+++
T Consensus 246 gl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 246 GLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 56789999999999999977755 356667778887 57889999999999888775
No 131
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.31 E-value=2.4e-06 Score=71.96 Aligned_cols=108 Identities=18% Similarity=0.192 Sum_probs=66.4
Q ss_pred CEeeccCCCCccchhh--hHHHHhhhCCCeEEEEcCCCCCCCCCC-CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSRV-FPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~~--~~~~l~~~~~~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
||++||.+.+...+.. -...+++..||-|+.|+.......... ....... . ...++. ......+.++..+
T Consensus 19 Vv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~---~--~g~~d~--~~i~~lv~~v~~~ 91 (220)
T PF10503_consen 19 VVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQ---Q--RGGGDV--AFIAALVDYVAAR 91 (220)
T ss_pred EEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCccccccccc---c--cCccch--hhHHHHHHhHhhh
Confidence 6899999999877764 245677777888999985422111100 0000000 0 000001 1111112233344
Q ss_pred hc--ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 78 LA--AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 78 l~--~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+ .+++++.|+|.||+.+..++..+|+.+.++..++..
T Consensus 92 ~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 92 YNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred cccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 44 457999999999999999999999999999888754
No 132
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.24 E-value=3e-05 Score=69.75 Aligned_cols=97 Identities=23% Similarity=0.274 Sum_probs=60.1
Q ss_pred CEeeccCC---CCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFG---ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~---~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
||++||-+ ++....+.....+....|+.|+.+|+|---.-. .+-.+.+....+..+.++
T Consensus 82 vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~------------------~p~~~~d~~~a~~~l~~~ 143 (312)
T COG0657 82 VLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP------------------FPAALEDAYAAYRWLRAN 143 (312)
T ss_pred EEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC------------------CCchHHHHHHHHHHHHhh
Confidence 58899933 233333345555655578999999999422211 111222222223333333
Q ss_pred ---hc--ccceEEEEeChhHHHHHHHHhhchh----hhhhheeeccc
Q 019089 78 ---LA--AEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAPA 115 (346)
Q Consensus 78 ---l~--~~~~~lvGhS~GG~ia~~~a~~~p~----~v~~lvli~p~ 115 (346)
++ .+++.|.|+|-||.+++.++..-.+ ...+.+++.|.
T Consensus 144 ~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 144 AAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred hHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 23 5789999999999999998886554 46777777764
No 133
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.23 E-value=3.3e-05 Score=69.17 Aligned_cols=97 Identities=23% Similarity=0.220 Sum_probs=66.1
Q ss_pred CEeeccCCC--C---ccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 019089 1 MVLFHGFGA--S---VFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFI 75 (346)
Q Consensus 1 ivllHG~~~--~---~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll 75 (346)
||++||-|- . +..++.+...+....+.-|+.+|+|=-=.. .-+-.+++...++..+.
T Consensus 93 lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh------------------~~Pa~y~D~~~Al~w~~ 154 (336)
T KOG1515|consen 93 LVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH------------------PFPAAYDDGWAALKWVL 154 (336)
T ss_pred EEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC------------------CCCccchHHHHHHHHHH
Confidence 689999432 2 345556667776667788999999931111 11223344445555665
Q ss_pred HH------hcccceEEEEeChhHHHHHHHHhhc------hhhhhhheeeccc
Q 019089 76 DI------LAAEKAILVGHSAGALVAVNSYFEA------PERVAALILIAPA 115 (346)
Q Consensus 76 ~~------l~~~~~~lvGhS~GG~ia~~~a~~~------p~~v~~lvli~p~ 115 (346)
++ .+.+++.|+|-|-||.||..+|.+. +-++++.|++-|.
T Consensus 155 ~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~ 206 (336)
T KOG1515|consen 155 KNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPF 206 (336)
T ss_pred HhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecc
Confidence 53 3567899999999999999888752 4678999999875
No 134
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.13 E-value=2.4e-05 Score=64.39 Aligned_cols=62 Identities=16% Similarity=0.260 Sum_probs=44.4
Q ss_pred cCCccEEEEEeCCCCCcChHHHHHHHHhCCC-----CeEEEecCCCCCCc-----hhCHH------HHHHHHHHHHHH
Q 019089 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIPG-----STFEVIKNCGHVPQ-----EEKVE------EFVSIVARFLQR 330 (346)
Q Consensus 269 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~-----~~~~~i~~~GH~~~-----~e~pe------~~~~~i~~fl~~ 330 (346)
.+++|+|+++|+.|.++|++....+.+.+.+ .++..+++.||..+ ++.|| +.-..+.+|+..
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999987777776632 35899999999544 45554 333344556554
No 135
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.09 E-value=3e-05 Score=77.30 Aligned_cols=68 Identities=25% Similarity=0.333 Sum_probs=51.5
Q ss_pred cCCccE-EEEEeCCCCCcChHHHHHHHHhCC--C--CeEEEecCCCCCCchhCH-HHHHHHHHHHHHHHhCCCC
Q 019089 269 EISCPV-LIVTGDTDRIVPSWNAERLSRAIP--G--STFEVIKNCGHVPQEEKV-EEFVSIVARFLQRAFGYSE 336 (346)
Q Consensus 269 ~i~~Pv-l~i~G~~D~~~~~~~~~~~~~~~p--~--~~~~~i~~~GH~~~~e~p-e~~~~~i~~fl~~~~~~~~ 336 (346)
.++.|. |+|||+.|.-++..++..+.+.+. + .+..++|+.+|.+-.-.. ..+...+..|+..+++.+.
T Consensus 679 ~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 679 NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 344454 999999999999888877766442 2 578899999998887554 6677888899988775543
No 136
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.08 E-value=4.9e-06 Score=70.52 Aligned_cols=23 Identities=22% Similarity=0.252 Sum_probs=19.0
Q ss_pred CEeeccCCCCccchhhhHHHHhh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAK 23 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~ 23 (346)
|||+||+.++...|..+...+..
T Consensus 7 vV~vHGL~G~~~d~~~~~~~l~~ 29 (217)
T PF05057_consen 7 VVFVHGLWGNPADMRYLKNHLEK 29 (217)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHH
Confidence 69999999999999777666654
No 137
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.08 E-value=2.2e-05 Score=70.33 Aligned_cols=101 Identities=21% Similarity=0.191 Sum_probs=54.8
Q ss_pred CEeeccCCCCccc--------------hh----hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019089 1 MVLFHGFGASVFS--------------WN----RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY 62 (346)
Q Consensus 1 ivllHG~~~~~~~--------------w~----~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y 62 (346)
||++||-++.++. |+ .+...|.+ .||-|+++|.+|+|........ . ....|
T Consensus 118 VL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk-~GYVvla~D~~g~GER~~~e~~------~----~~~~~ 186 (390)
T PF12715_consen 118 VLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK-RGYVVLAPDALGFGERGDMEGA------A----QGSNY 186 (390)
T ss_dssp EEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT-TTSEEEEE--TTSGGG-SSCCC------T----TTTS-
T ss_pred EEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh-CCCEEEEEcccccccccccccc------c----cccch
Confidence 5788887766522 21 23567776 4899999999999986532210 0 01122
Q ss_pred hhHHH---------------HHH---HHHHHHH---hcccceEEEEeChhHHHHHHHHhhchhhhhhheeec
Q 019089 63 SMAFS---------------VLA---TLYFIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIA 113 (346)
Q Consensus 63 s~~~~---------------~~~---~~~ll~~---l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~ 113 (346)
+.... +-+ +++|+.. .+.++|.++|+||||+.++.+|+. -++|++.|..+
T Consensus 187 ~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL-DdRIka~v~~~ 257 (390)
T PF12715_consen 187 DCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL-DDRIKATVANG 257 (390)
T ss_dssp -HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES
T ss_pred hHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc-chhhHhHhhhh
Confidence 21111 111 2233322 246789999999999999988876 57998888765
No 138
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.06 E-value=0.00044 Score=61.31 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=42.6
Q ss_pred CCccEEEEEeCCCCCcChHHHHHHHHhC-----CCCeEEEecCCCCCCchhCHHHHHHHHHHHHHHHh
Q 019089 270 ISCPVLIVTGDTDRIVPSWNAERLSRAI-----PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 270 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-----p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
.++|+++.+|..|.++|....+.+.+.+ .+.++..++..+|....-. -.....+|+.+++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHH
Confidence 3689999999999999999887776643 2456677788899764311 1133457887776
No 139
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.02 E-value=1.8e-05 Score=58.49 Aligned_cols=60 Identities=22% Similarity=0.367 Sum_probs=53.8
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
..|+|+|.++.|+++|.+.++.+++.+++++++.+++.||......-.=+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999999999999999999874446678888899874
No 140
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.01 E-value=8.2e-06 Score=73.82 Aligned_cols=97 Identities=22% Similarity=0.118 Sum_probs=67.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCe---EEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHH-HHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSK---VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAF-SVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~---via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~-~~~~~~~ll~ 76 (346)
++++||+..+...|..+...+.. .++. ++++++++- ....+ .....+ ...-+.+.+.
T Consensus 62 ivlVhG~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-~~~~~-----------------~~~~~~ql~~~V~~~l~ 122 (336)
T COG1075 62 IVLVHGLGGGYGNFLPLDYRLAI-LGWLTNGVYAFELSGG-DGTYS-----------------LAVRGEQLFAYVDEVLA 122 (336)
T ss_pred EEEEccCcCCcchhhhhhhhhcc-hHHHhccccccccccc-CCCcc-----------------ccccHHHHHHHHHHHHh
Confidence 58999999999999876555543 3444 888888754 11110 011111 1222445555
Q ss_pred HhcccceEEEEeChhHHHHHHHHhhch--hhhhhheeecccc
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPAI 116 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~~~p--~~v~~lvli~p~~ 116 (346)
..+-+++.|+||||||.+...++..++ .+|++++.++++.
T Consensus 123 ~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred hcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 667799999999999999998888877 8999999998753
No 141
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.00 E-value=2.2e-05 Score=72.06 Aligned_cols=115 Identities=22% Similarity=0.241 Sum_probs=55.5
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCC-CCC-CCCC----C--CCCCCC-------CCCCCCCchhH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLT-SRV-FPFQ----Q--PTPDTE-------NKKPLNPYSMA 65 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S-~~~-~~~~----~--~~~~~~-------~~~~~~~ys~~ 65 (346)
|||-||++++...+-.+...|+. .||=|+++|.|..=.+ ... .... . .....+ +......+.+.
T Consensus 103 vIFSHGlgg~R~~yS~~~~eLAS-~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 181 (379)
T PF03403_consen 103 VIFSHGLGGSRTSYSAICGELAS-HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFELR 181 (379)
T ss_dssp EEEE--TT--TTTTHHHHHHHHH-TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHHH
T ss_pred EEEeCCCCcchhhHHHHHHHHHh-CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHHH
Confidence 68999999999999888899987 4899999999952111 000 0000 0 000000 00000111110
Q ss_pred -----HHHHH---HHHHHH-----------------------HhcccceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 66 -----FSVLA---TLYFID-----------------------ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 66 -----~~~~~---~~~ll~-----------------------~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
.-+.+ +...+. +++.+++.++|||+||..++..+.+ ..++++.|+++|
T Consensus 182 ~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~-d~r~~~~I~LD~ 260 (379)
T PF03403_consen 182 NAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ-DTRFKAGILLDP 260 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh-ccCcceEEEeCC
Confidence 00111 222222 2235689999999999999966654 489999999998
Q ss_pred ccc
Q 019089 115 AIL 117 (346)
Q Consensus 115 ~~~ 117 (346)
.++
T Consensus 261 W~~ 263 (379)
T PF03403_consen 261 WMF 263 (379)
T ss_dssp --T
T ss_pred ccc
Confidence 765
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.00 E-value=0.00015 Score=59.36 Aligned_cols=107 Identities=17% Similarity=0.266 Sum_probs=62.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCC--------CCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRP--------AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATL 72 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~--------G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~ 72 (346)
||++||.+++...|.+++..|.- ..-+.|+|--| |.+.-.+-.-- .....-+.+.-++...+..+.
T Consensus 6 Ii~LHglGDsg~~~~~~~~~l~l-~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~-----~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 6 IIFLHGLGDSGSGWAQFLKQLPL-PNIKWICPTAPSRPVTLNGGAFMNAWFDIM-----ELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred EEEEecCCCCCccHHHHHHcCCC-CCeeEEcCCCCCCcccccCCCcccceecce-----eeCcccchhhhHHHHHHHHHH
Confidence 68999999999999777766532 23467777333 21111110000 000000111222333344466
Q ss_pred HHHHHh---c--ccceEEEEeChhHHHHHHHHhhchhhhhhheeec
Q 019089 73 YFIDIL---A--AEKAILVGHSAGALVAVNSYFEAPERVAALILIA 113 (346)
Q Consensus 73 ~ll~~l---~--~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~ 113 (346)
.++++. + ..++.+-|-||||++++..+..+|..+.+++-..
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccc
Confidence 666653 2 4578899999999999999988876666655543
No 143
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.96 E-value=2.5e-05 Score=68.77 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=62.3
Q ss_pred CEeeccCCCCc-cchhhh--H-------HHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH
Q 019089 1 MVLFHGFGASV-FSWNRA--M-------KPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA 70 (346)
Q Consensus 1 ivllHG~~~~~-~~w~~~--~-------~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~ 70 (346)
||..|+++.+. ..+... . ..+.+ .||-|+..|.||+|.|+.... .. ......|
T Consensus 23 il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~-~GY~vV~~D~RG~g~S~G~~~---------------~~-~~~e~~D 85 (272)
T PF02129_consen 23 ILTRTPYGKGDQTASDLAGANPGPPSARRPFAE-RGYAVVVQDVRGTGGSEGEFD---------------PM-SPNEAQD 85 (272)
T ss_dssp EEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH-TT-EEEEEE-TTSTTS-S-B----------------TT-SHHHHHH
T ss_pred EEEccCcCCCCCcccchhhhhcccchhHHHHHh-CCCEEEEECCcccccCCCccc---------------cC-ChhHHHH
Confidence 46777887653 112111 1 11555 589999999999999975321 10 2234445
Q ss_pred HHHHHHHhc-----ccceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 71 TLYFIDILA-----AEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 71 ~~~ll~~l~-----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
..+.|+.+. -.+|-++|.|++|++++..|...|..+++++...+
T Consensus 86 ~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 86 GYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp HHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred HHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 555555542 24799999999999999999989999999998865
No 144
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.96 E-value=0.0002 Score=58.17 Aligned_cols=96 Identities=25% Similarity=0.263 Sum_probs=59.9
Q ss_pred EeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHH-HHHHHHHHHHhcc
Q 019089 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFS-VLATLYFIDILAA 80 (346)
Q Consensus 2 vllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~-~~~~~~ll~~l~~ 80 (346)
||+-|=++-...=..+...|.+ .|+.|+.+|-+=|=.+.+++ -....+ ...+..+.++-+.
T Consensus 6 v~~SGDgGw~~~d~~~a~~l~~-~G~~VvGvdsl~Yfw~~rtP-----------------~~~a~Dl~~~i~~y~~~w~~ 67 (192)
T PF06057_consen 6 VFFSGDGGWRDLDKQIAEALAK-QGVPVVGVDSLRYFWSERTP-----------------EQTAADLARIIRHYRARWGR 67 (192)
T ss_pred EEEeCCCCchhhhHHHHHHHHH-CCCeEEEechHHHHhhhCCH-----------------HHHHHHHHHHHHHHHHHhCC
Confidence 5566644443222246677776 58999999966555443311 111222 2223344445578
Q ss_pred cceEEEEeChhHHHHHHHHhhch----hhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAP----ERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p----~~v~~lvli~p~ 115 (346)
++++|||.|+|+-+.-....+.| ++|+.++|++|.
T Consensus 68 ~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 68 KRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred ceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 89999999999988776666555 668888888763
No 145
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.83 E-value=6.1e-05 Score=66.19 Aligned_cols=86 Identities=22% Similarity=0.305 Sum_probs=53.2
Q ss_pred CEeeccCCCCccch------hhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSW------NRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYF 74 (346)
Q Consensus 1 ivllHG~~~~~~~w------~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~l 74 (346)
||++-|.++.-+.- +.....+++..+-+|+.+.+||.|.|.... +..++....++++.+
T Consensus 140 iL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~---------------s~~dLv~~~~a~v~y 204 (365)
T PF05677_consen 140 ILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP---------------SRKDLVKDYQACVRY 204 (365)
T ss_pred EEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---------------CHHHHHHHHHHHHHH
Confidence 35555655555440 123344555556799999999999996532 123444444444444
Q ss_pred H-HHh-c--ccceEEEEeChhHHHHHHHHhh
Q 019089 75 I-DIL-A--AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 75 l-~~l-~--~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
+ |+- | .+++++-|||+||.++.+...+
T Consensus 205 L~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 205 LRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 4 332 3 3789999999999998864433
No 146
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.76 E-value=7.8e-05 Score=64.69 Aligned_cols=50 Identities=22% Similarity=0.368 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHH-hccc--ceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 66 FSVLATLYFIDI-LAAE--KAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 66 ~~~~~~~~ll~~-l~~~--~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
...++++.+++. ++.. +..|.|+||||..|+.++++||+.+.+++.++|.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 334556666665 3332 2799999999999999999999999999999875
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.75 E-value=9.7e-05 Score=61.98 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=65.9
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCC--C--eEEEEcCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCchhHHHHHH-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTS--S--KVLAFDRPAFGLTSRVFP-----FQQPTPDTENKKPLNPYSMAFSVLA- 70 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~--~--~via~Dl~G~G~S~~~~~-----~~~~~~~~~~~~~~~~ys~~~~~~~- 70 (346)
.|||||++++..+....+.+|..... - =++.+|--| |-.... ...|+-+..-.. +.-+.......
T Consensus 48 TIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dg---slk~tGk~~Kd~~nP~I~~gfe~--n~~s~~~~s~wl 122 (288)
T COG4814 48 TIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDG---SLKVTGKISKDAKNPIIEFGFED--NTASGLDQSKWL 122 (288)
T ss_pred eEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCC---cEEEeeeecccCCCCeEEEEEec--CcCchhhHHHHH
Confidence 37999999999999998888866321 1 155566555 211100 001110000000 00112222222
Q ss_pred ---HHHHHHHhcccceEEEEeChhHHHHHHHHhhch-----hhhhhheeeccc
Q 019089 71 ---TLYFIDILAAEKAILVGHSAGALVAVNSYFEAP-----ERVAALILIAPA 115 (346)
Q Consensus 71 ---~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p-----~~v~~lvli~p~ 115 (346)
+.+|-++.++.++.+|||||||.-...++..+- ..++.+|+++.+
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 445555678999999999999999999988653 248899999754
No 148
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.67 E-value=0.00013 Score=67.49 Aligned_cols=80 Identities=20% Similarity=0.219 Sum_probs=53.2
Q ss_pred chhhhHHHHhhhCCCe-----EEE-EcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH---hcccce
Q 019089 13 SWNRAMKPLAKTTSSK-----VLA-FDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI---LAAEKA 83 (346)
Q Consensus 13 ~w~~~~~~l~~~~~~~-----via-~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~---l~~~~~ 83 (346)
.|..+++.|.+ .||+ ..+ +|+|- |. ...+.....+..+++. ...+++
T Consensus 66 ~~~~li~~L~~-~GY~~~~~l~~~pYDWR~---~~--------------------~~~~~~~~~lk~~ie~~~~~~~~kv 121 (389)
T PF02450_consen 66 YFAKLIENLEK-LGYDRGKDLFAAPYDWRL---SP--------------------AERDEYFTKLKQLIEEAYKKNGKKV 121 (389)
T ss_pred hHHHHHHHHHh-cCcccCCEEEEEeechhh---ch--------------------hhHHHHHHHHHHHHHHHHHhcCCcE
Confidence 68888888875 4653 233 68882 10 0122233334455544 346789
Q ss_pred EEEEeChhHHHHHHHHhhch------hhhhhheeecccc
Q 019089 84 ILVGHSAGALVAVNSYFEAP------ERVAALILIAPAI 116 (346)
Q Consensus 84 ~lvGhS~GG~ia~~~a~~~p------~~v~~lvli~p~~ 116 (346)
+||||||||.++..+....+ ..|+++|.++++.
T Consensus 122 ~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 122 VLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred EEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 99999999999998776653 3699999998753
No 149
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.66 E-value=0.0016 Score=54.27 Aligned_cols=37 Identities=30% Similarity=0.357 Sum_probs=28.1
Q ss_pred EEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCch
Q 019089 275 LIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQE 314 (346)
Q Consensus 275 l~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~ 314 (346)
-.+.|++|.++|+++.+.+=+.. +.+.++ +++|+++.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~-~~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR--CTIVEI-DAPHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc--CcEEEe-cCCCcCch
Confidence 57899999999999877765533 356667 58998863
No 150
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.64 E-value=0.00025 Score=62.84 Aligned_cols=103 Identities=18% Similarity=0.337 Sum_probs=60.8
Q ss_pred CEeeccCCCCc--cchhhhHHHHhhhCC--CeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASV--FSWNRAMKPLAKTTS--SKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~--~~w~~~~~~l~~~~~--~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
+||+|||..+- ..++. .......+ .-+|.+-||--|.--. .+ .| +....|+.......+..+.+
T Consensus 119 lvFvHGfNntf~dav~R~--aqI~~d~g~~~~pVvFSWPS~g~l~~---Yn------~D-reS~~~Sr~aLe~~lr~La~ 186 (377)
T COG4782 119 LVFVHGFNNTFEDAVYRT--AQIVHDSGNDGVPVVFSWPSRGSLLG---YN------YD-RESTNYSRPALERLLRYLAT 186 (377)
T ss_pred EEEEcccCCchhHHHHHH--HHHHhhcCCCcceEEEEcCCCCeeee---cc------cc-hhhhhhhHHHHHHHHHHHHh
Confidence 58999988764 22221 11222223 3588899997664211 10 01 11224555444444444445
Q ss_pred HhcccceEEEEeChhHHHHHHHHh----h----chhhhhhheeeccc
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYF----E----APERVAALILIAPA 115 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~----~----~p~~v~~lvli~p~ 115 (346)
....++++|++||||..+++.... + -+.+++.+||.+|.
T Consensus 187 ~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 187 DKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred CCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 556788999999999999875442 2 35678888888763
No 151
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.56 E-value=0.0053 Score=57.17 Aligned_cols=53 Identities=25% Similarity=0.321 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHHHHhc-----ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 63 SMAFSVLATLYFIDILA-----AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 63 s~~~~~~~~~~ll~~l~-----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
++.+.+.....|++++. ..|++|||+.=||-.++.+|+.+|+.+.-+|+-+++
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAP 174 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCC
Confidence 44555555667777652 348999999999999999999999999999998754
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.55 E-value=0.00061 Score=63.92 Aligned_cols=62 Identities=23% Similarity=0.340 Sum_probs=47.3
Q ss_pred cCCccEEEEEeCCCCCcChHHHHHHHHhCC-CCeEEEecCCCCCCchhC---------HHHHHHHHHHHHHH
Q 019089 269 EISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEK---------VEEFVSIVARFLQR 330 (346)
Q Consensus 269 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p-~~~~~~i~~~GH~~~~e~---------pe~~~~~i~~fl~~ 330 (346)
.+..|+||+-|..|.++++...+.+.+++. ..++++|.+++|..-+.. ..+|...+.++|.+
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~e 373 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKE 373 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHH
Confidence 457899999999999999998888877663 467899999999776654 34555555555544
No 153
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.50 E-value=0.00032 Score=67.73 Aligned_cols=35 Identities=31% Similarity=0.440 Sum_probs=24.7
Q ss_pred ceEEEEeChhHHHHHHHHhh---chhhhhhheeecccc
Q 019089 82 KAILVGHSAGALVAVNSYFE---APERVAALILIAPAI 116 (346)
Q Consensus 82 ~~~lvGhS~GG~ia~~~a~~---~p~~v~~lvli~p~~ 116 (346)
.+++|||||||++|...+.. .++.|.-++-.+++.
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 49999999999999855432 245566666666543
No 154
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.50 E-value=0.013 Score=52.38 Aligned_cols=44 Identities=30% Similarity=0.421 Sum_probs=35.8
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhch-hhhhhheeecc
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAP-ERVAALILIAP 114 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p-~~v~~lvli~p 114 (346)
+.+++...+..+++||||+.|+..+..+....+ ..+.++|+|++
T Consensus 183 a~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 183 AIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 444555556677999999999999999988766 45999999986
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.48 E-value=0.00055 Score=63.67 Aligned_cols=50 Identities=20% Similarity=0.297 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHh-----cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 66 FSVLATLYFIDIL-----AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 66 ~~~~~~~~ll~~l-----~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
..+.+++-+++.. +.++.+|.|+||||+.|+.+++++|+++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3445566666653 3457899999999999999999999999999999864
No 156
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.42 E-value=0.0026 Score=57.66 Aligned_cols=62 Identities=18% Similarity=0.314 Sum_probs=53.0
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCC-CeEEEecCCCCCCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~-~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
.++++|.++|.|..|..+.++....+...+|+ ..+..+||++|..-. ..+.+.|..|...+.
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999987 457889999998877 666777888988765
No 157
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00073 Score=55.80 Aligned_cols=62 Identities=29% Similarity=0.449 Sum_probs=49.6
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
..+++|.|.|.|+.|.++|...+..+++.+++..+.+-+ +||+++--.+ +.+-|.+|+....
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~--~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAK--YKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchH--HHHHHHHHHHHHH
Confidence 467899999999999999999999999999999665544 6999987664 4456666665443
No 158
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.33 E-value=0.00087 Score=57.71 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=35.4
Q ss_pred HHHHhcc--cceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 74 FIDILAA--EKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 74 ll~~l~~--~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
+.++.++ .+++++|-|+||+-++.++.++|+.+++.++++.
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 4445555 4699999999999999999999999999999974
No 159
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.31 E-value=0.0015 Score=56.37 Aligned_cols=106 Identities=19% Similarity=0.088 Sum_probs=67.6
Q ss_pred CEeeccCCCCccchhhhH--HHHhhhCCCeEEEEcCCCCCCCCCC-CCCCCCCCCCCCCCCCCCchhHHHHHHHHHHH--
Q 019089 1 MVLFHGFGASVFSWNRAM--KPLAKTTSSKVLAFDRPAFGLTSRV-FPFQQPTPDTENKKPLNPYSMAFSVLATLYFI-- 75 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~--~~l~~~~~~~via~Dl~G~G~S~~~-~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll-- 75 (346)
+|+|||-.++....++.. +.|++..+|=|.+|| |+.++=.. .......+..+ -.-.+++..+.+++
T Consensus 64 vv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd--g~~~~wn~~~~~~~~~p~~~-------~~g~ddVgflr~lva~ 134 (312)
T COG3509 64 VVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD--GYDRAWNANGCGNWFGPADR-------RRGVDDVGFLRALVAK 134 (312)
T ss_pred EEEEecCCCChHHhhcccchhhhhcccCcEEECcC--ccccccCCCcccccCCcccc-------cCCccHHHHHHHHHHH
Confidence 589999999987776544 677776789999995 22222100 00011001000 00112233333444
Q ss_pred --HHhccc--ceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 76 --DILAAE--KAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 76 --~~l~~~--~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+.+++ +|++.|-|-||..+..++..+|+.+.++..++..
T Consensus 135 l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 135 LVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred HHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 444565 7999999999999999999999999999999753
No 160
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.21 E-value=0.00075 Score=59.18 Aligned_cols=74 Identities=24% Similarity=0.256 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHH-HHHHhc--ccceEEEEeChhHHHHHHHHhh
Q 019089 25 TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY-FIDILA--AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 25 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~-ll~~l~--~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
.||.|..+.+|||+.|...+..+ .-..-+++++. .+..|+ .+.++|.|+|.||..+..+|..
T Consensus 267 lgYsvLGwNhPGFagSTG~P~p~---------------n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~ 331 (517)
T KOG1553|consen 267 LGYSVLGWNHPGFAGSTGLPYPV---------------NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASN 331 (517)
T ss_pred hCceeeccCCCCccccCCCCCcc---------------cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhc
Confidence 58999999999999998654321 11111222333 345565 4679999999999999988888
Q ss_pred chhhhhhheeecc
Q 019089 102 APERVAALILIAP 114 (346)
Q Consensus 102 ~p~~v~~lvli~p 114 (346)
|| .|+++||=++
T Consensus 332 YP-dVkavvLDAt 343 (517)
T KOG1553|consen 332 YP-DVKAVVLDAT 343 (517)
T ss_pred CC-CceEEEeecc
Confidence 98 5888888654
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=97.19 E-value=0.00094 Score=52.56 Aligned_cols=79 Identities=20% Similarity=0.218 Sum_probs=53.6
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||.||||-+|-.+...++ +. +.+..|.|-.+.|..- -+-.+...+..+..++..++.
T Consensus 2 ilYlHGFnSSP~shka~l--~~-----q~~~~~~~~i~y~~p~----------------l~h~p~~a~~ele~~i~~~~~ 58 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LL-----QFIDEDVRDIEYSTPH----------------LPHDPQQALKELEKAVQELGD 58 (191)
T ss_pred eEEEecCCCCcccHHHHH--HH-----HHHhccccceeeecCC----------------CCCCHHHHHHHHHHHHHHcCC
Confidence 689999999888876542 11 2344555655655311 112233334456677888888
Q ss_pred cceEEEEeChhHHHHHHHHhhc
Q 019089 81 EKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
+...|||-|+||+.|..++.++
T Consensus 59 ~~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 59 ESPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred CCceEEeecchHHHHHHHHHHh
Confidence 8899999999999999888765
No 162
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.15 E-value=0.0013 Score=62.02 Aligned_cols=92 Identities=18% Similarity=0.194 Sum_probs=57.8
Q ss_pred hHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-------cceEEEEeC
Q 019089 17 AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA-------EKAILVGHS 89 (346)
Q Consensus 17 ~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~-------~~~~lvGhS 89 (346)
.+..|++..+--||+++.|-||+|...... . .+.+.=.+.+.-..|++.|++++.. .+++++|-|
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~-------s-~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgS 121 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDL-------S-TENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGS 121 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGG-------G-GSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEET
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCcccc-------c-hhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCc
Confidence 345566555557999999999999632111 0 0112223445555678888887641 369999999
Q ss_pred hhHHHHHHHHhhchhhhhhheeecccc
Q 019089 90 AGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 90 ~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
+||++|..+-.+||+.|.+.+..+++.
T Consensus 122 Y~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 122 YGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred chhHHHHHHHhhCCCeeEEEEecccee
Confidence 999999999999999999988887654
No 163
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.15 E-value=0.00089 Score=53.36 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=28.5
Q ss_pred cccceEEEEeChhHHHHHHHHhhchh----hhhhheeecc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAPE----RVAALILIAP 114 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p~----~v~~lvli~p 114 (346)
...+++++|||+||.+|..++...+. .+..++..++
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 56789999999999999999887765 4555665654
No 164
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.14 E-value=0.0081 Score=50.98 Aligned_cols=57 Identities=21% Similarity=0.336 Sum_probs=49.7
Q ss_pred EEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCC-CCchhCHHHHHHHHHHHHHHH
Q 019089 274 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGH-VPQEEKVEEFVSIVARFLQRA 331 (346)
Q Consensus 274 vl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH-~~~~e~pe~~~~~i~~fl~~~ 331 (346)
|.++.+++|..+|......+++..|++++..++ .|| ...+-+-+.|...|.+-+.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 678899999999998899999999999999998 699 566788899999998887764
No 165
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.14 E-value=0.0023 Score=61.37 Aligned_cols=102 Identities=21% Similarity=0.178 Sum_probs=59.0
Q ss_pred CEeeccCCC---CccchhhhHHHHhhhCC-CeEEEEcCC----CCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH--
Q 019089 1 MVLFHGFGA---SVFSWNRAMKPLAKTTS-SKVLAFDRP----AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA-- 70 (346)
Q Consensus 1 ivllHG~~~---~~~~w~~~~~~l~~~~~-~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~-- 70 (346)
||+|||-+- +...+ ....|....+ +-|+.+++| ||+.+... .....+.+.+....
T Consensus 98 ~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-------------~~~~n~g~~D~~~al~ 162 (493)
T cd00312 98 MVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-------------ELPGNYGLKDQRLALK 162 (493)
T ss_pred EEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-------------CCCcchhHHHHHHHHH
Confidence 689999322 12222 2344544333 789999999 33322210 00112333322222
Q ss_pred -HHHHHHHhc--ccceEEEEeChhHHHHHHHHhh--chhhhhhheeeccccc
Q 019089 71 -TLYFIDILA--AEKAILVGHSAGALVAVNSYFE--APERVAALILIAPAIL 117 (346)
Q Consensus 71 -~~~ll~~l~--~~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~p~~~ 117 (346)
+.+-++..| .++|+|.|||.||..+..++.. .+..++++|+.+....
T Consensus 163 wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 163 WVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 223333444 4579999999999999987775 4567999999876543
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=97.03 E-value=0.0018 Score=57.77 Aligned_cols=55 Identities=16% Similarity=0.247 Sum_probs=40.8
Q ss_pred chhHHHH-HHHHHHHHH-hcc----cceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 62 YSMAFSV-LATLYFIDI-LAA----EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 62 ys~~~~~-~~~~~ll~~-l~~----~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
|.+.... .++-..+++ ... ++..++||||||.=|+.+|++||++++.+...++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 6665443 334434443 331 278999999999999999999999999999998754
No 167
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.00 E-value=0.0031 Score=59.95 Aligned_cols=84 Identities=19% Similarity=0.252 Sum_probs=51.7
Q ss_pred cchhhhHHHHhhhCCCe-----EEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH---hc-ccc
Q 019089 12 FSWNRAMKPLAKTTSSK-----VLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI---LA-AEK 82 (346)
Q Consensus 12 ~~w~~~~~~l~~~~~~~-----via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~---l~-~~~ 82 (346)
..|..+++.|.+ .||. ...+|+|= |.. +....+.+...+..+++. ++ .+|
T Consensus 156 ~vw~kLIe~L~~-iGY~~~nL~gAPYDWRl---s~~-----------------~le~rd~YF~rLK~lIE~ay~~nggkK 214 (642)
T PLN02517 156 FVWAVLIANLAR-IGYEEKNMYMAAYDWRL---SFQ-----------------NTEVRDQTLSRLKSNIELMVATNGGKK 214 (642)
T ss_pred eeHHHHHHHHHH-cCCCCCceeeccccccc---Ccc-----------------chhhhhHHHHHHHHHHHHHHHHcCCCe
Confidence 578889999976 4664 33445551 100 011112222334444443 34 579
Q ss_pred eEEEEeChhHHHHHHHHhh---------------chhhhhhheeecccc
Q 019089 83 AILVGHSAGALVAVNSYFE---------------APERVAALILIAPAI 116 (346)
Q Consensus 83 ~~lvGhS~GG~ia~~~a~~---------------~p~~v~~lvli~p~~ 116 (346)
++||||||||.+++.+... ....|+++|.|+++.
T Consensus 215 VVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 215 VVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred EEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 9999999999999975542 235689999998753
No 168
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.92 E-value=0.0018 Score=50.54 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=25.7
Q ss_pred HHHHHHHHhcccceEEEEeChhHHHHHHHHhhch
Q 019089 70 ATLYFIDILAAEKAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 70 ~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p 103 (346)
.+.++++..+..++++.|||+||.+|..+++...
T Consensus 53 ~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 53 ALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 3445555555567999999999999998887643
No 169
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.77 E-value=0.0065 Score=50.24 Aligned_cols=96 Identities=20% Similarity=0.254 Sum_probs=65.4
Q ss_pred CEeeccCCCCccchh---hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWN---RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 1 ivllHG~~~~~~~w~---~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
+|||-|++..--.=. ....+|-+ .++.++-+-++ |+. .-...++++.+++++.-+++|
T Consensus 39 vvfiGGLgdgLl~~~y~~~L~~~lde-~~wslVq~q~~----Ssy--------------~G~Gt~slk~D~edl~~l~~H 99 (299)
T KOG4840|consen 39 VVFIGGLGDGLLICLYTTMLNRYLDE-NSWSLVQPQLR----SSY--------------NGYGTFSLKDDVEDLKCLLEH 99 (299)
T ss_pred EEEEcccCCCccccccHHHHHHHHhh-ccceeeeeecc----ccc--------------cccccccccccHHHHHHHHHH
Confidence 578888887653322 23334433 46788887766 221 012235667778899999998
Q ss_pred hcc----cceEEEEeChhHHHHHHHHh--hchhhhhhheeeccc
Q 019089 78 LAA----EKAILVGHSAGALVAVNSYF--EAPERVAALILIAPA 115 (346)
Q Consensus 78 l~~----~~~~lvGhS~GG~ia~~~a~--~~p~~v~~lvli~p~ 115 (346)
++. .+++|+|||-|+--.+.+.. ..|..|++.|+.+|.
T Consensus 100 i~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApV 143 (299)
T KOG4840|consen 100 IQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPV 143 (299)
T ss_pred hhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCcc
Confidence 864 47999999999988776652 357889999998764
No 170
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.77 E-value=0.0009 Score=58.00 Aligned_cols=117 Identities=17% Similarity=0.186 Sum_probs=67.8
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCC--CCCCCCCC------CCC-chh-------
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPT--PDTENKKP------LNP-YSM------- 64 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~--~~~~~~~~------~~~-ys~------- 64 (346)
+||-||++++...|...--.|+. .||-|-|++.|-+-.+-....-+.++ +....... ... +.+
T Consensus 121 vvFSHGLggsRt~YSa~c~~LAS-hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~~ 199 (399)
T KOG3847|consen 121 VVFSHGLGGSRTLYSAYCTSLAS-HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVGQ 199 (399)
T ss_pred EEEecccccchhhHHHHhhhHhh-CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHHH
Confidence 58999999999888877677765 48999999999655432110000000 00000000 000 100
Q ss_pred -HHHHHHHHHHHHHh------------------------cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccccc
Q 019089 65 -AFSVLATLYFIDIL------------------------AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAP 119 (346)
Q Consensus 65 -~~~~~~~~~ll~~l------------------------~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~~p 119 (346)
...+...+.+++++ +-.++.|+|||+||..++..... -.+++..|+++..+++-
T Consensus 200 R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~-~t~FrcaI~lD~WM~Pl 278 (399)
T KOG3847|consen 200 RAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS-HTDFRCAIALDAWMFPL 278 (399)
T ss_pred HHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc-ccceeeeeeeeeeeccc
Confidence 01111122333322 12479999999999999855544 46788888888887753
No 171
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.57 E-value=0.0034 Score=53.25 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=31.2
Q ss_pred cceEEEEeChhHHHHHHHHhh----chhhhhhheeeccccccc
Q 019089 81 EKAILVGHSAGALVAVNSYFE----APERVAALILIAPAILAP 119 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~----~p~~v~~lvli~p~~~~p 119 (346)
+++++.|||.||.+|+..|.. ..++|.++...++|.+.+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 359999999999999987776 346788988888765543
No 172
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.50 E-value=0.0025 Score=60.41 Aligned_cols=83 Identities=16% Similarity=0.113 Sum_probs=57.7
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh---cccceEEEEeChhHHHHHHHHhh
Q 019089 25 TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 25 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l---~~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
.||-|+.+|.||.-.-+....+. -....+-...+++++.+..+.++. +.+++.|-|+|+||+++++...+
T Consensus 675 lGy~Vv~IDnRGS~hRGlkFE~~-------ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~ 747 (867)
T KOG2281|consen 675 LGYVVVFIDNRGSAHRGLKFESH-------IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQ 747 (867)
T ss_pred cceEEEEEcCCCccccchhhHHH-------HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhc
Confidence 58999999999854322111100 001122233456677677777776 46899999999999999999999
Q ss_pred chhhhhhheeecc
Q 019089 102 APERVAALILIAP 114 (346)
Q Consensus 102 ~p~~v~~lvli~p 114 (346)
+|+-++..|.-+|
T Consensus 748 ~P~IfrvAIAGap 760 (867)
T KOG2281|consen 748 YPNIFRVAIAGAP 760 (867)
T ss_pred CcceeeEEeccCc
Confidence 9999887776654
No 173
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.50 E-value=0.0063 Score=55.99 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=35.5
Q ss_pred HHHHHHHHH---Hh-cccceEEEEeChhHHHHHHHHhhchh--------hhhhheeeccc
Q 019089 68 VLATLYFID---IL-AAEKAILVGHSAGALVAVNSYFEAPE--------RVAALILIAPA 115 (346)
Q Consensus 68 ~~~~~~ll~---~l-~~~~~~lvGhS~GG~ia~~~a~~~p~--------~v~~lvli~p~ 115 (346)
...++..++ ++ |.+|++||+|||||.+.+.+...+++ .|++++-++++
T Consensus 165 l~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 333444444 33 44899999999999999988877665 68999988753
No 174
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.48 E-value=0.0039 Score=53.28 Aligned_cols=25 Identities=28% Similarity=0.315 Sum_probs=20.8
Q ss_pred cccceEEEEeChhHHHHHHHHhhch
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p 103 (346)
...++++.|||+||.+|..++....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 3567999999999999998887543
No 175
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.48 E-value=0.0037 Score=53.54 Aligned_cols=46 Identities=26% Similarity=0.461 Sum_probs=38.2
Q ss_pred HHHHHHHH---hcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 70 ATLYFIDI---LAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 70 ~~~~ll~~---l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+.-+++. ++.++-.++|||+||.+++...+.+|+.+...++++|.
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 35555554 34567899999999999999999999999999999864
No 176
>PLN02606 palmitoyl-protein thioesterase
Probab=96.33 E-value=0.014 Score=51.20 Aligned_cols=94 Identities=20% Similarity=0.177 Sum_probs=58.0
Q ss_pred CEeeccCC--CCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc--hhHHHHHHHHHH--
Q 019089 1 MVLFHGFG--ASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY--SMAFSVLATLYF-- 74 (346)
Q Consensus 1 ivllHG~~--~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y--s~~~~~~~~~~l-- 74 (346)
+|+.||++ ++...+..+...+.+..++.++.+- .|-|..+ .| .+.++++.+-+-
T Consensus 29 vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~-------------------s~~~~~~~Qv~~vce~l~ 88 (306)
T PLN02606 29 FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD-------------------SLFMPLRQQASIACEKIK 88 (306)
T ss_pred EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc-------------------ccccCHHHHHHHHHHHHh
Confidence 68999999 5556777776666422344444433 2322210 11 122233322222
Q ss_pred -HHHhcccceEEEEeChhHHHHHHHHhhchh--hhhhheeeccc
Q 019089 75 -IDILAAEKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPA 115 (346)
Q Consensus 75 -l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvli~p~ 115 (346)
+..+. +-+++||+|=||.++=.++.+.|+ .|+.+|.++++
T Consensus 89 ~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 89 QMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred cchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 22332 359999999999999999999987 49999999864
No 177
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.25 E-value=0.027 Score=48.05 Aligned_cols=95 Identities=21% Similarity=0.179 Sum_probs=64.1
Q ss_pred CEeeccCCCCccc--hhhhHHHHhhhCCCeEEEEcCCCCC--CCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFS--WNRAMKPLAKTTSSKVLAFDRPAFG--LTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~--w~~~~~~l~~~~~~~via~Dl~G~G--~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
+|++||++++..+ ...+...+.+..|..|++.| .|-| .|.- . .+.+++..+-+.+.
T Consensus 26 ~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~le-ig~g~~~s~l-----------------~--pl~~Qv~~~ce~v~ 85 (296)
T KOG2541|consen 26 VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLE-IGDGIKDSSL-----------------M--PLWEQVDVACEKVK 85 (296)
T ss_pred EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEE-ecCCcchhhh-----------------c--cHHHHHHHHHHHHh
Confidence 4899999999988 66777777777788899999 4555 2210 0 11233332223333
Q ss_pred Hhc-c-cceEEEEeChhHHHHHHHHhhch-hhhhhheeeccc
Q 019089 77 ILA-A-EKAILVGHSAGALVAVNSYFEAP-ERVAALILIAPA 115 (346)
Q Consensus 77 ~l~-~-~~~~lvGhS~GG~ia~~~a~~~p-~~v~~lvli~p~ 115 (346)
... + +-+++||.|=||.++-.++..-| ..|+.+|.++.+
T Consensus 86 ~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 86 QMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred cchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 222 2 45999999999999998887655 458888888754
No 178
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.81 E-value=0.049 Score=49.38 Aligned_cols=82 Identities=13% Similarity=0.087 Sum_probs=52.4
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHH-HHHHHHHHHHhcc------cceEEEEeChhHHHHHHHHh
Q 019089 28 KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFS-VLATLYFIDILAA------EKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 28 ~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~-~~~~~~ll~~l~~------~~~~lvGhS~GG~ia~~~a~ 100 (346)
-+|..+.|-||+|-.-. +++-+ + ...-.|=-.++ ..|..+++.+++- .+++++|-|+|||++..+=.
T Consensus 113 llVFaEHRyYGeS~PFG-~~s~k----~-~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl 186 (492)
T KOG2183|consen 113 LLVFAEHRYYGESLPFG-SQSYK----D-ARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRL 186 (492)
T ss_pred eEEEeehhccccCCCCc-chhcc----C-hhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHh
Confidence 58999999999985321 11000 0 00112322222 2345555665542 36999999999999998889
Q ss_pred hchhhhhhheeeccc
Q 019089 101 EAPERVAALILIAPA 115 (346)
Q Consensus 101 ~~p~~v~~lvli~p~ 115 (346)
+||+.|.|..-.+.+
T Consensus 187 KYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 187 KYPHIVLGALAASAP 201 (492)
T ss_pred cChhhhhhhhhccCc
Confidence 999999887776543
No 179
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.76 E-value=0.0065 Score=49.82 Aligned_cols=113 Identities=19% Similarity=0.183 Sum_probs=61.8
Q ss_pred CEeeccCCCCccchhh--hHHHHhhhCCCeEEEEcCCCCCCCCC-CCCCC--------CCCCCCCCCCCCCCchhHHHH-
Q 019089 1 MVLFHGFGASVFSWNR--AMKPLAKTTSSKVLAFDRPAFGLTSR-VFPFQ--------QPTPDTENKKPLNPYSMAFSV- 68 (346)
Q Consensus 1 ivllHG~~~~~~~w~~--~~~~l~~~~~~~via~Dl~G~G~S~~-~~~~~--------~~~~~~~~~~~~~~ys~~~~~- 68 (346)
+.+|-|+.++..++.. -.-..+...|.-|++||----|.--. ...+- ++. .+++ +-...|.|=+++
T Consensus 47 lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvn-At~e-pw~~~yrMYdYv~ 124 (283)
T KOG3101|consen 47 LFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVN-ATQE-PWAKHYRMYDYVV 124 (283)
T ss_pred EEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEe-cccc-hHhhhhhHHHHHH
Confidence 3578888888776642 11122222356799998544332100 00000 000 0000 011234443332
Q ss_pred HHHHHHHH----HhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 69 LATLYFID----ILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 69 ~~~~~ll~----~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
..+..+++ .++..++.+.||||||.=|+-.++++|.+.+++-..+|.
T Consensus 125 kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 125 KELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 33334443 234567999999999999999999999988887766653
No 180
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.73 E-value=0.029 Score=49.32 Aligned_cols=66 Identities=30% Similarity=0.482 Sum_probs=50.8
Q ss_pred cccCC-ccEEEEEeCCCCCcChHHHHHHHHhCCC--CeEEEecCCCCCCchhCHH---HHHHHHHHHHHHHh
Q 019089 267 LHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEKVE---EFVSIVARFLQRAF 332 (346)
Q Consensus 267 l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~p~--~~~~~i~~~GH~~~~e~pe---~~~~~i~~fl~~~~ 332 (346)
+.++. +|+|+++|..|.++|...+..+.+..+. .+...+++++|......+. +-.+.+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 34455 7999999999999999998888777655 4677788999988864444 56677778887653
No 181
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.68 E-value=0.024 Score=46.02 Aligned_cols=50 Identities=24% Similarity=0.264 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhc-----ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccccc
Q 019089 68 VLATLYFIDILA-----AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 117 (346)
Q Consensus 68 ~~~~~~ll~~l~-----~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~ 117 (346)
+.++..|++.|. ..+++++|||+|+.++-..+...+..+..+|++.++..
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 445777777663 23699999999999998666666889999999987544
No 182
>PLN02454 triacylglycerol lipase
Probab=95.62 E-value=0.017 Score=52.93 Aligned_cols=31 Identities=32% Similarity=0.457 Sum_probs=22.6
Q ss_pred HHHHHHHhcccc--eEEEEeChhHHHHHHHHhh
Q 019089 71 TLYFIDILAAEK--AILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 71 ~~~ll~~l~~~~--~~lvGhS~GG~ia~~~a~~ 101 (346)
+..+++.....+ +++.||||||.+|+..|..
T Consensus 216 V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 216 IKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444444 9999999999999988854
No 183
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.45 E-value=0.066 Score=47.13 Aligned_cols=35 Identities=29% Similarity=0.190 Sum_probs=31.4
Q ss_pred cceEEEEeChhHHHHHHHHhhchh--hhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPE--RVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~--~v~~lvli~p~ 115 (346)
+-+++||+|=||.++=.++.+.|+ .|+.+|.++.+
T Consensus 94 ~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 94 QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 359999999999999999999987 59999999864
No 184
>PLN02162 triacylglycerol lipase
Probab=95.40 E-value=0.025 Score=52.44 Aligned_cols=30 Identities=27% Similarity=0.064 Sum_probs=22.9
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHh
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
+..++......++++.|||+||.+|...|.
T Consensus 268 L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 268 LRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555568999999999999998654
No 185
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.25 E-value=0.088 Score=47.86 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=62.3
Q ss_pred CEeeccCCCCccchhhhHHHHhhh----CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKT----TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFID 76 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~----~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~ 76 (346)
||.+||-|---.....+++.|..- ....+++.|+---. +.. . ...-++.+.+.+.....+++
T Consensus 125 lIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~--~~~-----------~-~~~yPtQL~qlv~~Y~~Lv~ 190 (374)
T PF10340_consen 125 LIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTS--SDE-----------H-GHKYPTQLRQLVATYDYLVE 190 (374)
T ss_pred EEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccc--ccc-----------C-CCcCchHHHHHHHHHHHHHh
Confidence 588999776666655555544331 12357777765321 000 0 00123444455555556666
Q ss_pred HhcccceEEEEeChhHHHHHHHHh--hchhh---hhhheeecccc
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYF--EAPER---VAALILIAPAI 116 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~--~~p~~---v~~lvli~p~~ 116 (346)
..|-++++|+|-|-||.+++.+.. ++++. -+++|+|+|..
T Consensus 191 ~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 191 SEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred ccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 668889999999999999987654 22222 47899999875
No 186
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.16 E-value=0.042 Score=51.39 Aligned_cols=59 Identities=29% Similarity=0.458 Sum_probs=45.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC--------------------------CCeEEEecCCCCCCchhCHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP--------------------------GSTFEVIKNCGHVPQEEKVEEFVSIV 324 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p--------------------------~~~~~~i~~~GH~~~~e~pe~~~~~i 324 (346)
.++||+..|+.|.+++.-..+.+.+.++ +.++..|.+|||+++.++|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999999887777766542 12467889999999999999999999
Q ss_pred HHHHH
Q 019089 325 ARFLQ 329 (346)
Q Consensus 325 ~~fl~ 329 (346)
.+|++
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99984
No 187
>PLN02571 triacylglycerol lipase
Probab=95.12 E-value=0.03 Score=51.47 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=24.5
Q ss_pred HHHHHHHHHhccc--ceEEEEeChhHHHHHHHHhh
Q 019089 69 LATLYFIDILAAE--KAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 69 ~~~~~ll~~l~~~--~~~lvGhS~GG~ia~~~a~~ 101 (346)
.++..+++....+ ++++.||||||.+|...|..
T Consensus 212 ~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 212 NEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3455566655443 58999999999999988764
No 188
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.10 E-value=0.099 Score=48.78 Aligned_cols=109 Identities=21% Similarity=0.141 Sum_probs=59.6
Q ss_pred CEeeccC----CCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHH---HHHHH
Q 019089 1 MVLFHGF----GASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSV---LATLY 73 (346)
Q Consensus 1 ivllHG~----~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~---~~~~~ 73 (346)
||+|||- |..+.-|.. -..|.+..++=|+.+++|= |.=+....+. . .+.+....+ .-+.+++ +.+.+
T Consensus 97 mV~IHGG~y~~Gs~s~~~yd-gs~La~~g~vVvVSvNYRL-G~lGfL~~~~-~--~~~~~~~~n-~Gl~DqilALkWV~~ 170 (491)
T COG2272 97 MVYIHGGGYIMGSGSEPLYD-GSALAARGDVVVVSVNYRL-GALGFLDLSS-L--DTEDAFASN-LGLLDQILALKWVRD 170 (491)
T ss_pred EEEEeccccccCCCcccccC-hHHHHhcCCEEEEEeCccc-ccceeeehhh-c--ccccccccc-ccHHHHHHHHHHHHH
Confidence 5899992 333333322 3456665446777777773 2211111100 0 000111111 2233332 23556
Q ss_pred HHHHhcc--cceEEEEeChhHHHHHHHHh--hchhhhhhheeeccc
Q 019089 74 FIDILAA--EKAILVGHSAGALVAVNSYF--EAPERVAALILIAPA 115 (346)
Q Consensus 74 ll~~l~~--~~~~lvGhS~GG~ia~~~a~--~~p~~v~~lvli~p~ 115 (346)
-|+++|. ++|+|.|+|-|++.++.+.+ .....++++|+.++.
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~ 216 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGA 216 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCC
Confidence 6667765 56999999999999986654 244678888888764
No 189
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=94.85 E-value=0.045 Score=52.19 Aligned_cols=76 Identities=16% Similarity=0.056 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHhc--ccceEEEEeChhHHHHHHHHhh
Q 019089 25 TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYS-MAFSVLATLYFIDILA--AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 25 ~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys-~~~~~~~~~~ll~~l~--~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
.||-||..|.||-|.|...... .++ -.++.-|+++.+.... -.+|..+|-||+|...+.+|+.
T Consensus 79 ~GYavV~qDvRG~~~SeG~~~~--------------~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~ 144 (563)
T COG2936 79 QGYAVVNQDVRGRGGSEGVFDP--------------ESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAAL 144 (563)
T ss_pred CceEEEEecccccccCCcccce--------------eccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhc
Confidence 4899999999999999764211 111 1122233555555543 2579999999999999999999
Q ss_pred chhhhhhheeecc
Q 019089 102 APERVAALILIAP 114 (346)
Q Consensus 102 ~p~~v~~lvli~p 114 (346)
.|..+++++...+
T Consensus 145 ~pPaLkai~p~~~ 157 (563)
T COG2936 145 QPPALKAIAPTEG 157 (563)
T ss_pred CCchheeeccccc
Confidence 9999999888764
No 190
>PLN00413 triacylglycerol lipase
Probab=94.83 E-value=0.045 Score=50.93 Aligned_cols=32 Identities=28% Similarity=0.195 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcccceEEEEeChhHHHHHHHHh
Q 019089 69 LATLYFIDILAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 69 ~~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
..+.++++.....++++.|||+||++|...|.
T Consensus 272 ~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 272 RHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34556666666678999999999999998774
No 191
>PLN02408 phospholipase A1
Probab=94.49 E-value=0.056 Score=48.98 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=24.9
Q ss_pred HHHHHHHHhccc--ceEEEEeChhHHHHHHHHhhch
Q 019089 70 ATLYFIDILAAE--KAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 70 ~~~~ll~~l~~~--~~~lvGhS~GG~ia~~~a~~~p 103 (346)
++..+++..+.+ ++++.|||+||.+|...|....
T Consensus 187 eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 187 EIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 355566555443 5999999999999998886543
No 192
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=94.46 E-value=0.11 Score=50.39 Aligned_cols=106 Identities=23% Similarity=0.230 Sum_probs=54.3
Q ss_pred CEeecc--CCCCcc--chhhhHHHHhhhCCCeEEEEcCC----CCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHH--
Q 019089 1 MVLFHG--FGASVF--SWNRAMKPLAKTTSSKVLAFDRP----AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLA-- 70 (346)
Q Consensus 1 ivllHG--~~~~~~--~w~~~~~~l~~~~~~~via~Dl~----G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~-- 70 (346)
+|+||| |...+. ....- ..+....+.=||.+.+| ||-.+... ..+...+-+.++..+
T Consensus 128 ~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~------------~~~~gN~Gl~Dq~~AL~ 194 (535)
T PF00135_consen 128 MVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDL------------DAPSGNYGLLDQRLALK 194 (535)
T ss_dssp EEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSST------------TSHBSTHHHHHHHHHHH
T ss_pred EEEeecccccCCCcccccccc-cccccCCCEEEEEeccccccccccccccc------------ccCchhhhhhhhHHHHH
Confidence 589999 322222 22222 33333346778888887 22222110 001123544444332
Q ss_pred -HHHHHHHhcc--cceEEEEeChhHHHHHHHHhh--chhhhhhheeeccccccc
Q 019089 71 -TLYFIDILAA--EKAILVGHSAGALVAVNSYFE--APERVAALILIAPAILAP 119 (346)
Q Consensus 71 -~~~ll~~l~~--~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~p~~~~p 119 (346)
+.+-|...|. ++|+|.|||-||..+..+... -...++++|+.++....+
T Consensus 195 WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~ 248 (535)
T PF00135_consen 195 WVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSP 248 (535)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTST
T ss_pred HHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccccc
Confidence 3333444554 579999999999999877765 236799999988754443
No 193
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.41 E-value=0.05 Score=46.83 Aligned_cols=60 Identities=18% Similarity=0.311 Sum_probs=47.4
Q ss_pred cCCccEEEEEeCCCCCcChHHHHHHHHhC----CCCeEEEecCCCCCCch-hCHHHHHHHHHHHH
Q 019089 269 EISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQE-EKVEEFVSIVARFL 328 (346)
Q Consensus 269 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----p~~~~~~i~~~GH~~~~-e~pe~~~~~i~~fl 328 (346)
...+|-|+|+++.|.+++.+..++..+.. -+.+...+++++|..|+ .+|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 44689999999999999988665554432 22566778999997777 99999999999884
No 194
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.37 E-value=0.2 Score=42.62 Aligned_cols=32 Identities=28% Similarity=0.120 Sum_probs=25.7
Q ss_pred ceEEEEeChhHHHHHHHHhhchhhhhhheeec
Q 019089 82 KAILVGHSAGALVAVNSYFEAPERVAALILIA 113 (346)
Q Consensus 82 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~ 113 (346)
++.-|||||||.+-+.+...++..-++.++++
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 46779999999999988877765557778876
No 195
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.30 E-value=0.14 Score=46.16 Aligned_cols=59 Identities=27% Similarity=0.411 Sum_probs=46.5
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC------------------------C-CeEEEecCCCCCCchhCHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 325 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p------------------------~-~~~~~i~~~GH~~~~e~pe~~~~~i~ 325 (346)
.++||+..|+.|.+++.-..+.+.+.+. + .++..|-+|||+++ ++|+.-.+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999998876666555442 1 34566778999997 69999999999
Q ss_pred HHHHH
Q 019089 326 RFLQR 330 (346)
Q Consensus 326 ~fl~~ 330 (346)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99864
No 196
>PLN02934 triacylglycerol lipase
Probab=94.29 E-value=0.061 Score=50.48 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcccceEEEEeChhHHHHHHHHh
Q 019089 68 VLATLYFIDILAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 68 ~~~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
...+..+++.....++++.|||+||.+|...|.
T Consensus 308 ~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 308 RSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 344566666666678999999999999998774
No 197
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.10 E-value=0.046 Score=47.56 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=50.1
Q ss_pred CEeeccCCCCc---cchhhhHHHHhhh-CCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCc--hhHHHHHHHHHH
Q 019089 1 MVLFHGFGASV---FSWNRAMKPLAKT-TSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPY--SMAFSVLATLYF 74 (346)
Q Consensus 1 ivllHG~~~~~---~~w~~~~~~l~~~-~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~y--s~~~~~~~~~~l 74 (346)
||+.||++++. ..+..+...+.+. .|-.|+.+++ |-|.++. ..+.| .+...++.+-+.
T Consensus 8 vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D---------------~~~s~f~~v~~Qv~~vc~~ 71 (279)
T PF02089_consen 8 VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSED---------------VENSFFGNVNDQVEQVCEQ 71 (279)
T ss_dssp EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHH---------------HHHHHHSHHHHHHHHHHHH
T ss_pred EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchh---------------hhhhHHHHHHHHHHHHHHH
Confidence 68999999864 3566554444332 3556777774 3222110 00111 122223323333
Q ss_pred HHHhc-c-cceEEEEeChhHHHHHHHHhhchh-hhhhheeeccc
Q 019089 75 IDILA-A-EKAILVGHSAGALVAVNSYFEAPE-RVAALILIAPA 115 (346)
Q Consensus 75 l~~l~-~-~~~~lvGhS~GG~ia~~~a~~~p~-~v~~lvli~p~ 115 (346)
+.... + +-+++||+|=||.++=.++.+.|+ .|+.+|.++++
T Consensus 72 l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 72 LANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp HHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred HhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 33221 2 459999999999999999999875 69999999864
No 198
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.06 E-value=0.29 Score=45.67 Aligned_cols=107 Identities=18% Similarity=0.190 Sum_probs=70.3
Q ss_pred EeeccCCCCccchhh----hHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019089 2 VLFHGFGASVFSWNR----AMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI 77 (346)
Q Consensus 2 vllHG~~~~~~~w~~----~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~ 77 (346)
|||-|=+.....|-. ....+++..|-.|+..+.|-||+|...... +.+...--|......|+++|++.
T Consensus 90 LmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~--------st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 90 LMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDL--------STSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred EEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCC--------cccchhhhhHHHHHHHHHHHHHH
Confidence 567775555555522 123344445668999999999998532110 00111112334445568888888
Q ss_pred hcc-------cceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 78 LAA-------EKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 78 l~~-------~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
++. .+.+..|-|+-|.++..+=+++|+.|.+-|..+.+.
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 753 278889999999999878889999999988876544
No 199
>PLN02324 triacylglycerol lipase
Probab=93.72 E-value=0.096 Score=48.17 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=23.6
Q ss_pred HHHHHHHhccc--ceEEEEeChhHHHHHHHHhh
Q 019089 71 TLYFIDILAAE--KAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 71 ~~~ll~~l~~~--~~~lvGhS~GG~ia~~~a~~ 101 (346)
+..+++....+ ++++.|||+||.+|...|..
T Consensus 203 V~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 203 LKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 55666655443 59999999999999987754
No 200
>PLN02310 triacylglycerol lipase
Probab=93.63 E-value=0.1 Score=47.89 Aligned_cols=31 Identities=19% Similarity=0.344 Sum_probs=22.7
Q ss_pred HHHHHHHhc----ccceEEEEeChhHHHHHHHHhh
Q 019089 71 TLYFIDILA----AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 71 ~~~ll~~l~----~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
+..+++... .-++++.|||+||.+|...|..
T Consensus 195 V~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 195 VKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 455555442 1369999999999999987753
No 201
>PLN02802 triacylglycerol lipase
Probab=93.55 E-value=0.1 Score=49.05 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=23.5
Q ss_pred HHHHHHHhccc--ceEEEEeChhHHHHHHHHhhc
Q 019089 71 TLYFIDILAAE--KAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 71 ~~~ll~~l~~~--~~~lvGhS~GG~ia~~~a~~~ 102 (346)
+..+++....+ ++++.|||+||.+|...|...
T Consensus 318 V~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 318 VRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 45555554433 689999999999999877643
No 202
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.53 E-value=0.059 Score=44.37 Aligned_cols=42 Identities=29% Similarity=0.328 Sum_probs=34.3
Q ss_pred HHHhcccceEEEEeChhHHHHHHHHhhch--hhhhhheeecccc
Q 019089 75 IDILAAEKAILVGHSAGALVAVNSYFEAP--ERVAALILIAPAI 116 (346)
Q Consensus 75 l~~l~~~~~~lvGhS~GG~ia~~~a~~~p--~~v~~lvli~p~~ 116 (346)
+.....+.+.+|.||+||...+.+..++| ++|.+++|.++++
T Consensus 184 v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 184 VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 33446678999999999999999999988 5688888887654
No 203
>PLN02753 triacylglycerol lipase
Probab=93.49 E-value=0.11 Score=49.05 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=23.5
Q ss_pred HHHHHHHhcc-----cceEEEEeChhHHHHHHHHhh
Q 019089 71 TLYFIDILAA-----EKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 71 ~~~ll~~l~~-----~~~~lvGhS~GG~ia~~~a~~ 101 (346)
+..+++..+. -++++.|||+||.+|...|..
T Consensus 297 VkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 297 VKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4556655532 479999999999999988753
No 204
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.32 E-value=0.13 Score=46.47 Aligned_cols=38 Identities=34% Similarity=0.523 Sum_probs=29.8
Q ss_pred cccceEEEEeChhHHHHHHHHhhchhh-----hhhheeecccc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAPER-----VAALILIAPAI 116 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p~~-----v~~lvli~p~~ 116 (346)
+.++++|||||+|+.+.+.......++ |+.++|++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 567899999999999998766554444 78888887543
No 205
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=92.96 E-value=0.25 Score=40.37 Aligned_cols=51 Identities=25% Similarity=0.365 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHh----cccceEEEEeChhHHHHHHHHhh------chhhhhhheeecccc
Q 019089 66 FSVLATLYFIDIL----AAEKAILVGHSAGALVAVNSYFE------APERVAALILIAPAI 116 (346)
Q Consensus 66 ~~~~~~~~ll~~l----~~~~~~lvGhS~GG~ia~~~a~~------~p~~v~~lvli~p~~ 116 (346)
.-+.++..+++.. .-.+++|+|+|-|++++..++.. ..++|.++++++-+.
T Consensus 62 ~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 62 AGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp HHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 3344444555443 34689999999999999988765 458899999987443
No 206
>PLN02209 serine carboxypeptidase
Probab=92.90 E-value=0.33 Score=45.65 Aligned_cols=59 Identities=24% Similarity=0.364 Sum_probs=47.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC------------------------C-CeEEEecCCCCCCchhCHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 325 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p------------------------~-~~~~~i~~~GH~~~~e~pe~~~~~i~ 325 (346)
.++||+..|+.|.+++.-..+.+.+.+. + .++..|-+|||+++ ++|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4789999999999999876666655442 2 34566788999997 69999999999
Q ss_pred HHHHH
Q 019089 326 RFLQR 330 (346)
Q Consensus 326 ~fl~~ 330 (346)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99853
No 207
>PLN02719 triacylglycerol lipase
Probab=92.69 E-value=0.16 Score=47.74 Aligned_cols=20 Identities=35% Similarity=0.541 Sum_probs=17.8
Q ss_pred ceEEEEeChhHHHHHHHHhh
Q 019089 82 KAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 82 ~~~lvGhS~GG~ia~~~a~~ 101 (346)
++++.|||+||.+|...|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999987754
No 208
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.59 E-value=0.17 Score=47.65 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=23.2
Q ss_pred HHHHHHHHhc----ccceEEEEeChhHHHHHHHHhh
Q 019089 70 ATLYFIDILA----AEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 70 ~~~~ll~~l~----~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
++..+++... --+++|.|||+||.+|+..|..
T Consensus 303 eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 303 EVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3455555543 1359999999999999988754
No 209
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=92.51 E-value=0.073 Score=46.44 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=31.8
Q ss_pred cceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 81 EKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+.-+|.|-|+||.+++..++.||+++-.++.-+|.
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps 211 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGS 211 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCc
Confidence 45799999999999999999999999999998764
No 210
>PLN02761 lipase class 3 family protein
Probab=92.31 E-value=0.2 Score=47.32 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=22.2
Q ss_pred HHHHHHHhc------ccceEEEEeChhHHHHHHHHh
Q 019089 71 TLYFIDILA------AEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 71 ~~~ll~~l~------~~~~~lvGhS~GG~ia~~~a~ 100 (346)
+..+++..+ .-++++.|||+||.+|...|.
T Consensus 278 V~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 278 VKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 455555542 136999999999999998775
No 211
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.24 E-value=0.47 Score=44.62 Aligned_cols=59 Identities=27% Similarity=0.411 Sum_probs=47.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC------------------------C-CeEEEecCCCCCCchhCHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP------------------------G-STFEVIKNCGHVPQEEKVEEFVSIVA 325 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p------------------------~-~~~~~i~~~GH~~~~e~pe~~~~~i~ 325 (346)
.++||+..|+.|.+++.-..+.+.+.+. + .+++.|-+|||+++ ++|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999999877666654432 1 34566788999997 69999999999
Q ss_pred HHHHH
Q 019089 326 RFLQR 330 (346)
Q Consensus 326 ~fl~~ 330 (346)
+|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99854
No 212
>PLN02847 triacylglycerol lipase
Probab=91.85 E-value=0.17 Score=48.45 Aligned_cols=23 Identities=30% Similarity=0.245 Sum_probs=19.2
Q ss_pred cccceEEEEeChhHHHHHHHHhh
Q 019089 79 AAEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 34579999999999999987764
No 213
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=91.75 E-value=0.23 Score=45.42 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=45.9
Q ss_pred ccEEEEEeCCCCCcChHHHHHHHHhCC----CCeEEEe-----------cCCCCCCchhCHHHHHHHHHHHHHHHhC
Q 019089 272 CPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVI-----------KNCGHVPQEEKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 272 ~Pvl~i~G~~D~~~~~~~~~~~~~~~p----~~~~~~i-----------~~~GH~~~~e~pe~~~~~i~~fl~~~~~ 333 (346)
+-.+..|+..|..+|.+.-..+.+.+. ++++..+ .+..|..-+.--..|.+.+-..+++..+
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~~ 370 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQG 370 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhhc
Confidence 345667999999999988777766543 4555554 5678988888888888888888877543
No 214
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.83 E-value=0.2 Score=45.61 Aligned_cols=81 Identities=22% Similarity=0.182 Sum_probs=44.6
Q ss_pred CEeeccCCC-CccchhhhHHHHhhhC-CCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGA-SVFSWNRAMKPLAKTT-SSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~-~~~~w~~~~~~l~~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l 78 (346)
+||.||+-+ +...|...+....... +. .+..+|+=..... +.+....-.+... .++.+.+...
T Consensus 83 vVlthGi~~~~~~~~~~~~~~~~kk~p~~---~iv~~g~~~~~~~---------T~~Gv~~lG~Rla---~~~~e~~~~~ 147 (405)
T KOG4372|consen 83 VVLTHGLHGADMEYWKEKIEQMTKKMPDK---LIVVRGKMNNMCQ---------TFDGVDVLGERLA---EEVKETLYDY 147 (405)
T ss_pred EEeccccccccHHHHHHHHHhhhcCCCcc---eEeeeccccchhh---------ccccceeeecccH---HHHhhhhhcc
Confidence 589999777 6788877666664421 22 3333443322210 0111111122222 2233444445
Q ss_pred cccceEEEEeChhHHHHH
Q 019089 79 AAEKAILVGHSAGALVAV 96 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~ 96 (346)
.++++..||||+||.++-
T Consensus 148 si~kISfvghSLGGLvar 165 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVAR 165 (405)
T ss_pred ccceeeeeeeecCCeeee
Confidence 579999999999999876
No 215
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=90.62 E-value=0.59 Score=43.93 Aligned_cols=61 Identities=31% Similarity=0.559 Sum_probs=48.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhC---------C----------------CCeEEEecCCCCCCchhCHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAI---------P----------------GSTFEVIKNCGHVPQEEKVEEFVSIVA 325 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~---------p----------------~~~~~~i~~~GH~~~~e~pe~~~~~i~ 325 (346)
..++++..|+.|.++|.-..+..-+.+ | +..+..|-|+||+++.++|+.-...+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 379999999999999988766643322 1 123466779999999999999999999
Q ss_pred HHHHHH
Q 019089 326 RFLQRA 331 (346)
Q Consensus 326 ~fl~~~ 331 (346)
+|+...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 998754
No 216
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=90.02 E-value=0.66 Score=37.98 Aligned_cols=60 Identities=18% Similarity=0.263 Sum_probs=45.6
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCCC-----CeEEEecCCCCCCchhCH---HHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIPG-----STFEVIKNCGHVPQEEKV---EEFVSIVARFLQR 330 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~-----~~~~~i~~~GH~~~~e~p---e~~~~~i~~fl~~ 330 (346)
+++.|-|-|+.|.++.+.......++..+ ...+..+|+||+...--+ +++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 36778899999999998877777666543 245677899999888666 5666778888764
No 217
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=89.75 E-value=1.5 Score=40.11 Aligned_cols=91 Identities=23% Similarity=0.245 Sum_probs=53.5
Q ss_pred EeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH----
Q 019089 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI---- 77 (346)
Q Consensus 2 vllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~---- 77 (346)
||+.|=|+-...=+.+.+.|.+ .|+.||.+|=.=|=.|.+.+ +..+.|+..+++.
T Consensus 264 v~~SGDGGWr~lDk~v~~~l~~-~gvpVvGvdsLRYfW~~rtP--------------------e~~a~Dl~r~i~~y~~~ 322 (456)
T COG3946 264 VFYSGDGGWRDLDKEVAEALQK-QGVPVVGVDSLRYFWSERTP--------------------EQIAADLSRLIRFYARR 322 (456)
T ss_pred EEEecCCchhhhhHHHHHHHHH-CCCceeeeehhhhhhccCCH--------------------HHHHHHHHHHHHHHHHh
Confidence 3444444333222245666766 48999999855444454321 2334444455544
Q ss_pred hcccceEEEEeChhHHHHHHHHhhch----hhhhhheeec
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFEAP----ERVAALILIA 113 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~~p----~~v~~lvli~ 113 (346)
-+..++.|+|.|.|+-|-=....+.| ++|+-+.|++
T Consensus 323 w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 323 WGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred hCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 46789999999999988765554444 4555555554
No 218
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=89.72 E-value=0.76 Score=38.30 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhc-ccceEEEEeChhHHHHHHHHhhc
Q 019089 68 VLATLYFIDILA-AEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 68 ~~~~~~ll~~l~-~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
..+..++|++.+ .++++|+|||=|+++.+++...+
T Consensus 81 ~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 81 RAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 334556677764 56899999999999999988654
No 219
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.57 E-value=0.65 Score=42.16 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcccceEEEEeChhHHHHHHHHhh
Q 019089 69 LATLYFIDILAAEKAILVGHSAGALVAVNSYFE 101 (346)
Q Consensus 69 ~~~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~ 101 (346)
.++..+++...--++++-|||+||.+|...|..
T Consensus 159 ~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 159 AELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 345566666676679999999999999977753
No 220
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=88.23 E-value=1.3 Score=41.26 Aligned_cols=102 Identities=11% Similarity=0.061 Sum_probs=56.8
Q ss_pred CEeeccCCCCccchhhhHHHHhh---h---------------CCCeEEEEcCC-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAK---T---------------TSSKVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNP 61 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~---~---------------~~~~via~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~~ 61 (346)
||.+.|-|++++.|-.+. +... . ....++.+|.| |.|-|...... ...
T Consensus 43 ~~wlnGGPG~SS~~g~f~-e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~------------~~~ 109 (415)
T PF00450_consen 43 ILWLNGGPGCSSMWGLFG-ENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS------------DYV 109 (415)
T ss_dssp EEEEE-TTTB-THHHHHC-TTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG------------GGS
T ss_pred EEEecCCceecccccccc-ccCceEEeecccccccccccccccccceEEEeecCceEEeeccccc------------ccc
Confidence 467788888887773321 1110 0 01369999955 99998642210 012
Q ss_pred chhHHHHHHHHHHHHHh-------cccceEEEEeChhHHHHHHHHhh----c------hhhhhhheeeccc
Q 019089 62 YSMAFSVLATLYFIDIL-------AAEKAILVGHSAGALVAVNSYFE----A------PERVAALILIAPA 115 (346)
Q Consensus 62 ys~~~~~~~~~~ll~~l-------~~~~~~lvGhS~GG~ia~~~a~~----~------p~~v~~lvli~p~ 115 (346)
.+.+..+.++..+|..+ ...+++|.|.|+||.-+-.+|.. . +=.++++++.++.
T Consensus 110 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~ 180 (415)
T PF00450_consen 110 WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGW 180 (415)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-
T ss_pred chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcc
Confidence 34556666666666543 34579999999999877666643 2 2336777776654
No 221
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=85.84 E-value=0.98 Score=43.59 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=32.1
Q ss_pred cccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
..++..+.|.|-||.++-...-++|+.+.++|+=-|.
T Consensus 547 ~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 547 QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred CccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 3567999999999999999999999999999885543
No 222
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.71 E-value=0.68 Score=37.01 Aligned_cols=43 Identities=28% Similarity=0.392 Sum_probs=34.7
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
+++++.-.....+-|.||||+.|..+..+||+...++|.++..
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 3344433455677899999999999999999999999999754
No 223
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=85.47 E-value=3.3 Score=40.32 Aligned_cols=61 Identities=21% Similarity=0.175 Sum_probs=40.0
Q ss_pred CchhHHHHHH---HHHHHHHhc--ccceEEEEeChhHHHHHHHHhh--chhhhhhheeeccccccccc
Q 019089 61 PYSMAFSVLA---TLYFIDILA--AEKAILVGHSAGALVAVNSYFE--APERVAALILIAPAILAPRL 121 (346)
Q Consensus 61 ~ys~~~~~~~---~~~ll~~l~--~~~~~lvGhS~GG~ia~~~a~~--~p~~v~~lvli~p~~~~p~~ 121 (346)
.+.+.+.+.+ +..-|...| .++++|.|||-||.++..+... ....+.++|.++...+.+..
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~~~ 237 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSPWA 237 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccchh
Confidence 4444444332 344444554 4679999999999999877763 23678888888766555543
No 224
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=83.45 E-value=4.5 Score=36.42 Aligned_cols=64 Identities=13% Similarity=0.141 Sum_probs=35.7
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh---cccceEEEEeChhHHHHHHHHh
Q 019089 28 KVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDIL---AAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 28 ~via~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l---~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
+++.+|.| |-|-|....... .+.+.-...+....+..|++.. ..++++|.|-|+||.-+=.+|.
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~---------~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~ 70 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPID---------KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 70 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCC---------ccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHH
Confidence 68999999 999885321110 0001011111222233444332 4567999999999986665554
No 225
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=83.31 E-value=1.6 Score=37.83 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=19.7
Q ss_pred cccceEEEEeChhHHHHHHHHhhc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
.-.++.|-|||+||.+|-.+-.++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 345799999999999998777654
No 226
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=83.31 E-value=1.6 Score=37.83 Aligned_cols=24 Identities=25% Similarity=0.253 Sum_probs=19.7
Q ss_pred cccceEEEEeChhHHHHHHHHhhc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
.-.++.|-|||+||.+|-.+-.++
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCceEEEeccccchHHHHHhcccc
Confidence 345799999999999998777654
No 227
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.70 E-value=2.2 Score=40.89 Aligned_cols=36 Identities=22% Similarity=0.511 Sum_probs=25.6
Q ss_pred ccceEEEEeChhHHHHHHHHhh-----ch------hhhhhheeeccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFE-----AP------ERVAALILIAPA 115 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~-----~p------~~v~~lvli~p~ 115 (346)
.++++.|||||||..+-.+.+. .| ...+++++++.+
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 4579999999999988766653 22 235677777654
No 228
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=82.69 E-value=2.1 Score=41.63 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=32.3
Q ss_pred ccceEEEEeChhHHHHHHHHhhchhhhhhheeeccc
Q 019089 80 AEKAILVGHSAGALVAVNSYFEAPERVAALILIAPA 115 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~ 115 (346)
.+.++++|-|-|||++-.++...|+.++++|.--|+
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPF 561 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPF 561 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChhhhhheeecCCc
Confidence 357999999999999999999999999999987664
No 229
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=81.88 E-value=2.1 Score=40.80 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=39.4
Q ss_pred HHHHHHHHHh---cccceEEEEeChhHHHHHHHHhhchhhhhhheeecccc
Q 019089 69 LATLYFIDIL---AAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 69 ~~~~~ll~~l---~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
...+++++.. ..+.-+..|.|-||..++..|.+||+...+++.-+|+.
T Consensus 100 ~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 100 VVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 3344555543 35678999999999999999999999999999998875
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=78.79 E-value=9.8 Score=32.33 Aligned_cols=24 Identities=33% Similarity=0.382 Sum_probs=19.9
Q ss_pred cccceEEEEeChhHHHHHHHHhhc
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
..++++|+|+|.|+.++-..+.+.
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHH
Confidence 346799999999999999877653
No 231
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=78.17 E-value=3.3 Score=37.40 Aligned_cols=61 Identities=20% Similarity=0.240 Sum_probs=48.8
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCe-EEEecCCCCCCchhCHHHHHHHHHHHHHHH
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGST-FEVIKNCGHVPQEEKVEEFVSIVARFLQRA 331 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~-~~~i~~~GH~~~~e~pe~~~~~i~~fl~~~ 331 (346)
..+..|..++.|+.|..++++++......+|+.+ +..+||+.|... ++.+.+.|..|++.-
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999965 677899888654 555566677777654
No 232
>PLN02209 serine carboxypeptidase
Probab=71.98 E-value=10 Score=35.86 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=42.0
Q ss_pred eEEEEc-CCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH----h---cccceEEEEeChhHHHHHHHH
Q 019089 28 KVLAFD-RPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI----L---AAEKAILVGHSAGALVAVNSY 99 (346)
Q Consensus 28 ~via~D-l~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~----l---~~~~~~lvGhS~GG~ia~~~a 99 (346)
+++.+| ..|.|-|...... ..-+-+..+.++..++.. . ...+++|.|.|+||.-+=.+|
T Consensus 119 nllfiDqPvGtGfSy~~~~~-------------~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPI-------------ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred cEEEecCCCCCCccCCCCCC-------------CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 689999 6788888432110 000112233444444443 2 345799999999998666555
Q ss_pred hhch----------hhhhhheeecc
Q 019089 100 FEAP----------ERVAALILIAP 114 (346)
Q Consensus 100 ~~~p----------~~v~~lvli~p 114 (346)
...- =.++++++.++
T Consensus 186 ~~i~~~~~~~~~~~inl~Gi~igng 210 (437)
T PLN02209 186 HEISKGNYICCNPPINLQGYVLGNP 210 (437)
T ss_pred HHHHhhcccccCCceeeeeEEecCc
Confidence 4321 13466666654
No 233
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=71.85 E-value=9.5 Score=35.97 Aligned_cols=75 Identities=17% Similarity=0.202 Sum_probs=42.9
Q ss_pred CeEEEEc-CCCCCCCCCCCCCCCCCCCCCCCCCCCCch-hHHHHHHHHHHHH----Hh---cccceEEEEeChhHHHHHH
Q 019089 27 SKVLAFD-RPAFGLTSRVFPFQQPTPDTENKKPLNPYS-MAFSVLATLYFID----IL---AAEKAILVGHSAGALVAVN 97 (346)
Q Consensus 27 ~~via~D-l~G~G~S~~~~~~~~~~~~~~~~~~~~~ys-~~~~~~~~~~ll~----~l---~~~~~~lvGhS~GG~ia~~ 97 (346)
..++.+| .-|.|-|...... .++ -...+.++..++. .. ...+++|.|.|+||..+=.
T Consensus 116 anllfiDqPvGtGfSy~~~~~--------------~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~ 181 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPI--------------DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPA 181 (433)
T ss_pred CcEEEecCCCCCCccCCCCCC--------------CccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHH
Confidence 3699999 7788988532111 011 0112233333333 22 3467999999999986665
Q ss_pred HHhhc----------hhhhhhheeeccc
Q 019089 98 SYFEA----------PERVAALILIAPA 115 (346)
Q Consensus 98 ~a~~~----------p~~v~~lvli~p~ 115 (346)
+|... +=.++++++-+|.
T Consensus 182 la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 182 LVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred HHHHHHhhcccccCCcccceeeEecCCC
Confidence 55432 1245677776653
No 234
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=71.47 E-value=16 Score=30.73 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=23.4
Q ss_pred CEeeccCCCCccchhhh----HHHHhhhCCCeEEEEcCC
Q 019089 1 MVLFHGFGASVFSWNRA----MKPLAKTTSSKVLAFDRP 35 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~----~~~l~~~~~~~via~Dl~ 35 (346)
|||||||-.|...|..- .+.+.+. +.++.+|-|
T Consensus 8 vLcLHGfrQsg~~F~~Ktg~~rK~l~k~--~el~f~~aP 44 (230)
T KOG2551|consen 8 VLCLHGFRQSGKVFSEKTGSLRKLLKKL--AELVFPDAP 44 (230)
T ss_pred EEEecchhhccHHHHHHhhhHHHHHHhh--heEEecCCC
Confidence 69999999999887642 3333332 578888877
No 235
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=71.15 E-value=4.2 Score=36.55 Aligned_cols=29 Identities=17% Similarity=0.266 Sum_probs=24.2
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHH
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSY 99 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a 99 (346)
+.++++..|+++-.++|||+|=+.|+..+
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 55667788999999999999999988554
No 236
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.08 E-value=15 Score=30.71 Aligned_cols=58 Identities=10% Similarity=0.118 Sum_probs=38.4
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCC-eEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSS-KVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~-~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~ 79 (346)
|+|.||-..++...+..+++.....|| .|+.--.-||-. ++.+++.++.-+
T Consensus 141 vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~----------------------------~d~vi~~l~~~~ 192 (265)
T COG4822 141 VLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPL----------------------------VDTVIEYLRKNG 192 (265)
T ss_pred EEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCc----------------------------HHHHHHHHHHcC
Confidence 578899888887777778877665566 555544443221 344667777778
Q ss_pred ccceEEE
Q 019089 80 AEKAILV 86 (346)
Q Consensus 80 ~~~~~lv 86 (346)
+++++|+
T Consensus 193 ~~~v~L~ 199 (265)
T COG4822 193 IKEVHLI 199 (265)
T ss_pred CceEEEe
Confidence 8876664
No 237
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=69.32 E-value=14 Score=34.99 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=60.1
Q ss_pred CEeeccCCCCccchhhhHHHHhhh---CC---------------CeEEEEc-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKT---TS---------------SKVLAFD-RPAFGLTSRVFPFQQPTPDTENKKPLNP 61 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~---~~---------------~~via~D-l~G~G~S~~~~~~~~~~~~~~~~~~~~~ 61 (346)
|+.+-|-|++++.|-.+. .+... .+ -.++.+| --|.|-|-... +....+-
T Consensus 104 i~wlNGGPGcSS~~g~l~-elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~----------~e~~~d~ 172 (498)
T COG2939 104 IFWLNGGPGCSSVTGLLG-ELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALG----------DEKKKDF 172 (498)
T ss_pred EEEecCCCChHhhhhhhh-hcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccc----------cccccch
Confidence 467788888887775432 12110 00 1588889 67888875311 1111222
Q ss_pred chhHHHHHHHHH-HHHHh---c--ccceEEEEeChhHHHHHHHHhhchhh---hhhheeecccc
Q 019089 62 YSMAFSVLATLY-FIDIL---A--AEKAILVGHSAGALVAVNSYFEAPER---VAALILIAPAI 116 (346)
Q Consensus 62 ys~~~~~~~~~~-ll~~l---~--~~~~~lvGhS~GG~ia~~~a~~~p~~---v~~lvli~p~~ 116 (346)
..+..++..+.+ |.+++ . ..+.+|+|-|+||.-+-.+|...-++ .++++++.+..
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 223333332222 22222 2 35899999999999888788765553 77888876643
No 238
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=66.75 E-value=7 Score=34.61 Aligned_cols=29 Identities=21% Similarity=0.216 Sum_probs=23.9
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHH
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSY 99 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a 99 (346)
+.+++...|+++-.++|||+|-+.|+.++
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHh
Confidence 44566778899999999999999998655
No 239
>PRK10279 hypothetical protein; Provisional
Probab=66.69 E-value=7.8 Score=34.55 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=30.1
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhh
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAAL 109 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~l 109 (346)
++..+++.++..-.++|-|+|+.++..+|....+.+..+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~~l~~~ 61 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDW 61 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChHHHHHH
Confidence 445666678888889999999999999998765544443
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=66.02 E-value=8.9 Score=36.65 Aligned_cols=61 Identities=10% Similarity=0.219 Sum_probs=45.1
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHh----CCC--------CeEEEecCCCCCCchh--CHHHHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRA----IPG--------STFEVIKNCGHVPQEE--KVEEFVSIVARFLQRA 331 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~----~p~--------~~~~~i~~~GH~~~~e--~pe~~~~~i~~fl~~~ 331 (346)
--..++.||-.|.++|+..+..+.+. .++ .++..+||.+|+.--. .+-.....|.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 46789999999999998876655443 332 3688999999976554 3345677888999864
No 241
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=62.74 E-value=9.3 Score=33.85 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=23.8
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHH
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSY 99 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a 99 (346)
+.+++...++++-.++|||+|=+.|..++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 44566777889999999999999988655
No 242
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=61.97 E-value=9.3 Score=33.63 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=23.2
Q ss_pred HHHHHHHhc-ccceEEEEeChhHHHHHHHHh
Q 019089 71 TLYFIDILA-AEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 71 ~~~ll~~l~-~~~~~lvGhS~GG~ia~~~a~ 100 (346)
+..++...+ +++-.++|||+|=+.|..++-
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 344555666 899999999999999886653
No 243
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=59.96 E-value=1.3e+02 Score=26.81 Aligned_cols=56 Identities=13% Similarity=0.183 Sum_probs=41.1
Q ss_pred CCchhHHHHHHHHHHHHHhcccceEEEEeChh-----HHHHHHHHhhchhhhhhheeecccc
Q 019089 60 NPYSMAFSVLATLYFIDILAAEKAILVGHSAG-----ALVAVNSYFEAPERVAALILIAPAI 116 (346)
Q Consensus 60 ~~ys~~~~~~~~~~ll~~l~~~~~~lvGhS~G-----G~ia~~~a~~~p~~v~~lvli~p~~ 116 (346)
+.+.++++.+-+++++..+|.+ +++++..-- +.+++.-+...|..-.++++++.++
T Consensus 149 G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPI 209 (415)
T COG4553 149 GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPI 209 (415)
T ss_pred CCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcc
Confidence 4688888888889999999977 677766543 3445544456788889999987654
No 244
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=58.56 E-value=48 Score=27.57 Aligned_cols=41 Identities=15% Similarity=-0.064 Sum_probs=30.9
Q ss_pred CchhHHHHHHHHHHHHHhcccceEEEEeCh----hHHHHHHHHhhc
Q 019089 61 PYSMAFSVLATLYFIDILAAEKAILVGHSA----GALVAVNSYFEA 102 (346)
Q Consensus 61 ~ys~~~~~~~~~~ll~~l~~~~~~lvGhS~----GG~ia~~~a~~~ 102 (346)
.|+-+.++..+.++++..+ -.++|+|||. |+.++-.+|.+.
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 3455566677778887777 5799999999 888888888753
No 245
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=57.55 E-value=15 Score=29.49 Aligned_cols=33 Identities=24% Similarity=0.112 Sum_probs=25.4
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhch
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p 103 (346)
+...+++.++..-.++|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334455557777888999999999999888643
No 246
>COG3933 Transcriptional antiterminator [Transcription]
Probab=57.44 E-value=35 Score=31.92 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=50.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||+-||...-++. -.++.+|.... -++++|+|= ..+..+..+.+.+.+++.+.
T Consensus 112 IiiAHG~sTASSm-aevanrLL~~~--~~~aiDMPL------------------------dvsp~~vle~l~e~~k~~~~ 164 (470)
T COG3933 112 IIIAHGYSTASSM-AEVANRLLGEE--IFIAIDMPL------------------------DVSPSDVLEKLKEYLKERDY 164 (470)
T ss_pred EEEecCcchHHHH-HHHHHHHhhcc--ceeeecCCC------------------------cCCHHHHHHHHHHHHHhcCc
Confidence 5788998765544 57777776532 589999882 12233445567788888888
Q ss_pred cceEEEEeChhHHHHHHH
Q 019089 81 EKAILVGHSAGALVAVNS 98 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~ 98 (346)
.+=.++=-+||......=
T Consensus 165 ~~GlllLVDMGSL~~f~~ 182 (470)
T COG3933 165 RSGLLLLVDMGSLTSFGS 182 (470)
T ss_pred cCceEEEEecchHHHHHH
Confidence 887888899999998743
No 247
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=56.85 E-value=18 Score=31.54 Aligned_cols=45 Identities=27% Similarity=0.236 Sum_probs=27.0
Q ss_pred hcccCCccEEEEEeCCCCCcChHHHHHHHHhCCCC----eEEEecCCCCC
Q 019089 266 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS----TFEVIKNCGHV 311 (346)
Q Consensus 266 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~----~~~~i~~~GH~ 311 (346)
.+.++++|+|++.|-.|..+.....+.+..+.... +++ +-..+|.
T Consensus 223 ~~~~i~vP~l~v~Gw~D~~~~~~~~~~~~~l~~~~~~~~~Li-igpw~H~ 271 (272)
T PF02129_consen 223 RLDKIDVPVLIVGGWYDTLFLRGALRAYEALRAPGSKPQRLI-IGPWTHG 271 (272)
T ss_dssp HHGG--SEEEEEEETTCSSTSHHHHHHHHHHCTTSTC-EEEE-EESESTT
T ss_pred HHhhCCCCEEEecccCCcccchHHHHHHHHhhcCCCCCCEEE-EeCCCCC
Confidence 45789999999999999666644444444443333 443 3335774
No 248
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=56.39 E-value=14 Score=33.00 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=25.9
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
++..+++.++.-=.++|.|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44566666887778889999999999999764
No 249
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.12 E-value=16 Score=29.98 Aligned_cols=31 Identities=26% Similarity=0.188 Sum_probs=24.0
Q ss_pred HHHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 72 LYFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 72 ~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
...+++.++..=.++|-|.|+++|..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3444555777778899999999999988754
No 250
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=55.57 E-value=35 Score=36.32 Aligned_cols=42 Identities=29% Similarity=0.329 Sum_probs=30.8
Q ss_pred HHHHHhc----ccceEEEEeChhHHHHHHHHhhc--hhhhhhheeecc
Q 019089 73 YFIDILA----AEKAILVGHSAGALVAVNSYFEA--PERVAALILIAP 114 (346)
Q Consensus 73 ~ll~~l~----~~~~~lvGhS~GG~ia~~~a~~~--p~~v~~lvli~p 114 (346)
.+++++. ..+..|+|.|+|+.++..+|... .+....+|+++.
T Consensus 2170 ~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2170 YYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDG 2217 (2376)
T ss_pred HHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecC
Confidence 4555542 35799999999999999988643 344666888874
No 251
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=54.36 E-value=21 Score=33.08 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=62.0
Q ss_pred EeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc--
Q 019089 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA-- 79 (346)
Q Consensus 2 vllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~-- 79 (346)
+.--|++.+..-.+.-...|. +-+-+.++.|-||.|...+ ....-.++..-+.|...+++.++
T Consensus 67 ~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p------------~DW~~Lti~QAA~D~Hri~~A~K~i 131 (448)
T PF05576_consen 67 LYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEP------------ADWSYLTIWQAASDQHRIVQAFKPI 131 (448)
T ss_pred EEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCC------------CCcccccHhHhhHHHHHHHHHHHhh
Confidence 344466665544433222332 3477889999999884211 11233455556667666666553
Q ss_pred -ccceEEEEeChhHHHHHHHHhhchhhhhhheee
Q 019089 80 -AEKAILVGHSAGALVAVNSYFEAPERVAALILI 112 (346)
Q Consensus 80 -~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli 112 (346)
..|=+=-|-|=|||.++.+=..||+.|.+.|--
T Consensus 132 Y~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 132 YPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred ccCCceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 356566799999999997777799999988874
No 252
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=52.67 E-value=18 Score=33.97 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=29.2
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhhee
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALIL 111 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl 111 (346)
..+.+.++..-++.|-|.|+.+|..++...++++..+..
T Consensus 93 kaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~~l~ 131 (421)
T cd07230 93 KALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPELLE 131 (421)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHHH
Confidence 334444666678999999999999999877777655543
No 253
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=51.07 E-value=42 Score=30.10 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=43.9
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCCCCCCCCCCCCCch--hHHHHHHHHHHHHHh-------cccceEEEEeChhHHHHHH
Q 019089 28 KVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYS--MAFSVLATLYFIDIL-------AAEKAILVGHSAGALVAVN 97 (346)
Q Consensus 28 ~via~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~~ys--~~~~~~~~~~ll~~l-------~~~~~~lvGhS~GG~ia~~ 97 (346)
.++.+|.| |-|.|--. . ...|+ .+..+.|+.++++.+ +-.+++++..|+||-++-.
T Consensus 73 dllfvDnPVGaGfSyVd------------g--~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k 138 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVD------------G--SSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAK 138 (414)
T ss_pred cEEEecCCCcCceeeec------------C--cccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhh
Confidence 47788876 66666311 1 12343 456677888888764 3457999999999999998
Q ss_pred HHhhchhhh
Q 019089 98 SYFEAPERV 106 (346)
Q Consensus 98 ~a~~~p~~v 106 (346)
+++..-+-|
T Consensus 139 ~al~l~~aI 147 (414)
T KOG1283|consen 139 FALELDDAI 147 (414)
T ss_pred hhhhHHHHH
Confidence 887544433
No 254
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=50.42 E-value=69 Score=28.08 Aligned_cols=59 Identities=17% Similarity=0.298 Sum_probs=42.7
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCC-CC-CCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC-GH-VPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~-GH-~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
....|||+++.|++ ...+...+.+|+.+.+.+..+ |+ ..---.|++..+.|.+=.++.+
T Consensus 144 g~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~Al 204 (270)
T cd08769 144 GEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKEAL 204 (270)
T ss_pred hhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHHHH
Confidence 45679999999987 234556677899998888764 74 4445777888888877666554
No 255
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=50.12 E-value=14 Score=35.03 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=29.7
Q ss_pred hcccceEEEEeChhHHHHHHHHhh-----chhhhhhheeecccc
Q 019089 78 LAAEKAILVGHSAGALVAVNSYFE-----APERVAALILIAPAI 116 (346)
Q Consensus 78 l~~~~~~lvGhS~GG~ia~~~a~~-----~p~~v~~lvli~p~~ 116 (346)
.|.++++|||.|+|+.+....... .-..|+.++++++|+
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv 487 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPV 487 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCc
Confidence 467899999999999998854442 235688899987654
No 256
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=49.18 E-value=24 Score=31.59 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=28.9
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhhe
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 110 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 110 (346)
..+.+.++..-++.|-|.|+.+|..++...++.+..+.
T Consensus 88 kaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~~ 125 (323)
T cd07231 88 RTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSFF 125 (323)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 34444577777899999999999999987666666554
No 257
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.78 E-value=25 Score=29.74 Aligned_cols=30 Identities=27% Similarity=0.123 Sum_probs=23.4
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
..+++.+++.-.++|-|.|+.+|..+|...
T Consensus 20 ~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 344455777778999999999999988754
No 258
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=48.18 E-value=24 Score=32.65 Aligned_cols=41 Identities=17% Similarity=0.177 Sum_probs=32.4
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhhee
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALIL 111 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl 111 (346)
++..+.+.|+.+=++.|-|.|+++|..+|...++.+..+..
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 44455666777778999999999999999977777777654
No 259
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=47.17 E-value=23 Score=31.63 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=27.4
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
+++-+++.++..-.|.|-|+|+.++..+|...
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 55667778899999999999999999999753
No 260
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=47.02 E-value=26 Score=30.73 Aligned_cols=32 Identities=22% Similarity=0.108 Sum_probs=25.6
Q ss_pred HHHHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 71 TLYFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 71 ~~~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
++..+++.++.-=.++|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44556777887778889999999999998763
No 261
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.78 E-value=26 Score=32.78 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=28.9
Q ss_pred HHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhhe
Q 019089 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALI 110 (346)
Q Consensus 74 ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lv 110 (346)
.+.+.++..=+++|-|.|+.+|..++..-++.+..++
T Consensus 88 aL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 88 ALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3344467777899999999999999987777776654
No 262
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.98 E-value=32 Score=28.86 Aligned_cols=31 Identities=23% Similarity=0.159 Sum_probs=24.2
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhch
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p 103 (346)
..+++.++.-=.++|.|.|+.+|..+|...+
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3445557766678899999999999998764
No 263
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=45.44 E-value=71 Score=26.74 Aligned_cols=60 Identities=18% Similarity=0.228 Sum_probs=43.0
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCC-CCCCchhCHHHHHHHHHHHHHHHhCCCC
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC-GHVPQEEKVEEFVSIVARFLQRAFGYSE 336 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~-GH~~~~e~pe~~~~~i~~fl~~~~~~~~ 336 (346)
..|.+++.|..+...+++..+.+.+.+.+.-+.+++++ ++... |.+.+.+.++++++.++
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~~~~~~~------~~~~~r~~~~~v~p~~~ 113 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDRDCGSAG------FDASFRRLMKRVFPEPP 113 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECCCccccc------ccHHHHHHHHHhcCCCC
Confidence 57999999999998888889999998877778788766 33322 33334556666665333
No 264
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=45.43 E-value=23 Score=34.42 Aligned_cols=29 Identities=21% Similarity=0.155 Sum_probs=23.3
Q ss_pred HHHH-HHhcccceEEEEeChhHHHHHHHHh
Q 019089 72 LYFI-DILAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 72 ~~ll-~~l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
.+++ +..|+++-.++|||+|=+.|+-.|-
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhC
Confidence 3445 5788999999999999999986553
No 265
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.95 E-value=88 Score=22.73 Aligned_cols=82 Identities=11% Similarity=0.038 Sum_probs=47.1
Q ss_pred hhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcccceEEEEeChhHH--
Q 019089 16 RAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGAL-- 93 (346)
Q Consensus 16 ~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~~~~~lvGhS~GG~-- 93 (346)
..+..+.+..++..=.+.++.+|.+-..... .... +.-...+..+++.+.-.+++|||=|=-.=
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~-----------~~~~---~~K~~~i~~i~~~fP~~kfiLIGDsgq~Dpe 79 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFK-----------SGAE---EHKRDNIERILRDFPERKFILIGDSGQHDPE 79 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccccccc-----------CCch---hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHH
Confidence 4444554445666666777777654211100 0001 11123355777888889999999664332
Q ss_pred HHHHHHhhchhhhhhhee
Q 019089 94 VAVNSYFEAPERVAALIL 111 (346)
Q Consensus 94 ia~~~a~~~p~~v~~lvl 111 (346)
+-.++|.++|++|.++.+
T Consensus 80 iY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 80 IYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHCCCCEEEEEE
Confidence 222367889999988754
No 266
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=44.25 E-value=26 Score=33.26 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=24.2
Q ss_pred eEEEecCCCCCCchhCHHHHHHHHHHHHHH
Q 019089 301 TFEVIKNCGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 301 ~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
.+..+-++||+++.++|+...+.+..|+..
T Consensus 461 ~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 461 TFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred eEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 344444689999999999999999988764
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=42.20 E-value=39 Score=27.21 Aligned_cols=31 Identities=26% Similarity=0.165 Sum_probs=23.3
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhch
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p 103 (346)
..+++.++.-=.++|-|.|+.+|..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3344556665677899999999998887654
No 268
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=41.04 E-value=29 Score=29.37 Aligned_cols=26 Identities=27% Similarity=0.423 Sum_probs=22.3
Q ss_pred ccEEEEEeCCCCCcChHHHHHHHHhC
Q 019089 272 CPVLIVTGDTDRIVPSWNAERLSRAI 297 (346)
Q Consensus 272 ~Pvl~i~G~~D~~~~~~~~~~~~~~~ 297 (346)
.|++++||+.|..+.+.++..+.+..
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHH
Confidence 69999999999999988887776654
No 269
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.24 E-value=43 Score=28.86 Aligned_cols=25 Identities=40% Similarity=0.522 Sum_probs=19.2
Q ss_pred EEEEeChhHHHHHHHHhhchhhhhhh
Q 019089 84 ILVGHSAGALVAVNSYFEAPERVAAL 109 (346)
Q Consensus 84 ~lvGhS~GG~ia~~~a~~~p~~v~~l 109 (346)
.++|-|.|+.+|..++. .|+++..+
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~~~ 58 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIEEC 58 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHHHH
Confidence 78999999999998884 35555443
No 270
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=39.59 E-value=1e+02 Score=30.26 Aligned_cols=61 Identities=21% Similarity=0.207 Sum_probs=42.0
Q ss_pred ccEEEEEeCCCCCcChHHHHHHHHhCCC--Ce--EEEecCCCCCCchhCHHHHHH--HHHHHHHHHh
Q 019089 272 CPVLIVTGDTDRIVPSWNAERLSRAIPG--ST--FEVIKNCGHVPQEEKVEEFVS--IVARFLQRAF 332 (346)
Q Consensus 272 ~Pvl~i~G~~D~~~~~~~~~~~~~~~p~--~~--~~~i~~~GH~~~~e~pe~~~~--~i~~fl~~~~ 332 (346)
-|+|+-.+.+|.=+.|.++++++..+.. .. +.+=-++||..--+..+.-.+ .+-.|+.+.+
T Consensus 581 P~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 581 PPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 4899999999988888999999776632 22 333345799887776663333 3456777654
No 271
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=38.71 E-value=73 Score=30.27 Aligned_cols=65 Identities=11% Similarity=0.046 Sum_probs=34.2
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHH---hcccceEEEEeChhHHHHHHHHh
Q 019089 28 KVLAFDRP-AFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDI---LAAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 28 ~via~Dl~-G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~---l~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
.++.+|.| |-|-|-....+ +.++.+.-+-.+....+..++++ ..-+++.|.|-|++|..+=.+|.
T Consensus 119 NiLfLd~PvGvGFSYs~~~~--------~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~ 187 (454)
T KOG1282|consen 119 NILFLDQPVGVGFSYSNTSS--------DYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQ 187 (454)
T ss_pred cEEEEecCCcCCccccCCCC--------cCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHH
Confidence 58888876 67776432111 11111111111222223344443 24578999999999966655553
No 272
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=36.17 E-value=54 Score=29.42 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=16.4
Q ss_pred eEE-EEeChhHHHHHHHHhhc
Q 019089 83 AIL-VGHSAGALVAVNSYFEA 102 (346)
Q Consensus 83 ~~l-vGhS~GG~ia~~~a~~~ 102 (346)
+.+ .|.|+||.||..+|..+
T Consensus 33 fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 33 FDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred ccEEEeeChHHHHHHHHHcCC
Confidence 544 69999999999998753
No 273
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=34.28 E-value=1.8e+02 Score=25.68 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=11.8
Q ss_pred ccceEEEEeChhHHHH
Q 019089 80 AEKAILVGHSAGALVA 95 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia 95 (346)
+...+++|+|==..++
T Consensus 210 lg~Pilvg~SRKsfig 225 (282)
T PRK11613 210 FNLPLLVGMSRKSMIG 225 (282)
T ss_pred CCCCEEEEecccHHHH
Confidence 4568999999666555
No 274
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=34.22 E-value=39 Score=33.03 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=31.2
Q ss_pred CccEEEEEeCCCCCcChHHH-HHHHHhC-------CCCeEEEecCCCCCCc
Q 019089 271 SCPVLIVTGDTDRIVPSWNA-ERLSRAI-------PGSTFEVIKNCGHVPQ 313 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~-~~~~~~~-------p~~~~~~i~~~GH~~~ 313 (346)
.+|.++++|..|.++|..+. +-+..+. ...++++|.++-|+-.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 58999999999999998753 3332222 2357889999888654
No 275
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=34.18 E-value=63 Score=25.92 Aligned_cols=30 Identities=23% Similarity=0.148 Sum_probs=22.3
Q ss_pred HHHHHhcccceEEEEeChhHHHHHHHHhhc
Q 019089 73 YFIDILAAEKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 73 ~ll~~l~~~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
..+++.++.-=.++|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334445665567889999999999888654
No 276
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.43 E-value=55 Score=28.79 Aligned_cols=38 Identities=26% Similarity=0.471 Sum_probs=29.0
Q ss_pred ceEEEEeChhHHHHHHHHh---hchhhhhhheeeccccccc
Q 019089 82 KAILVGHSAGALVAVNSYF---EAPERVAALILIAPAILAP 119 (346)
Q Consensus 82 ~~~lvGhS~GG~ia~~~a~---~~p~~v~~lvli~p~~~~p 119 (346)
|++|.|.|+|++-+..... ..-+++.+.++++|+.+++
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~ 150 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSP 150 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCCh
Confidence 5999999999988875432 2346799999999876654
No 277
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=32.77 E-value=97 Score=26.59 Aligned_cols=102 Identities=25% Similarity=0.142 Sum_probs=48.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCC-CCCCCCCCCCCCCCch-hHHHHHHHHHHHHHh
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQ-QPTPDTENKKPLNPYS-MAFSVLATLYFIDIL 78 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~-~~~~~~~~~~~~~~ys-~~~~~~~~~~ll~~l 78 (346)
+++.||++.+...-......+.. .+++++..|...+|.+....... .+.....+. ....+. ....+.+.....-..
T Consensus 52 v~~~h~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 129 (299)
T COG1073 52 VVFLHGFGSSKEQSLGYAVLLAE-KGYRVLAGDASLFGESGGDPRGLADSEGYAEDF-SAAVLLLLSEGVLDKDYRLLGA 129 (299)
T ss_pred EEeccCccccccCcchHHHHhhh-ceeEEeeeccccccccccccccccCcccccccc-chhheeeeccccccHHHHHHhh
Confidence 47899999998775444555554 35677777753333332211100 000000000 000000 000000000001111
Q ss_pred cccceEEEEeChhHHHHHHHHhhchh
Q 019089 79 AAEKAILVGHSAGALVAVNSYFEAPE 104 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~~~p~ 104 (346)
...+....|+++||..+..++...+.
T Consensus 130 ~~~~~~~~g~~~~~~~~~~~~~~~~~ 155 (299)
T COG1073 130 SLGPRILAGLSLGGPSAGALLAWGPT 155 (299)
T ss_pred hcCcceEEEEEeeccchHHHhhcchh
Confidence 22678889999999999888877763
No 278
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.89 E-value=64 Score=27.49 Aligned_cols=32 Identities=28% Similarity=0.187 Sum_probs=23.5
Q ss_pred HHHHHHhccc--ceEEEEeChhHHHHHHHHhhch
Q 019089 72 LYFIDILAAE--KAILVGHSAGALVAVNSYFEAP 103 (346)
Q Consensus 72 ~~ll~~l~~~--~~~lvGhS~GG~ia~~~a~~~p 103 (346)
...+.+.++. --.++|-|.|++++..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3444445665 3479999999999999998644
No 279
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=31.28 E-value=1.1e+02 Score=29.98 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=27.0
Q ss_pred ccEEEEEeCCCCCcChH--HHHHHHHhCCCCeEEEecCCCC
Q 019089 272 CPVLIVTGDTDRIVPSW--NAERLSRAIPGSTFEVIKNCGH 310 (346)
Q Consensus 272 ~Pvl~i~G~~D~~~~~~--~~~~~~~~~p~~~~~~i~~~GH 310 (346)
-||-++...-|++.... .++++.+.-....+.++++.-|
T Consensus 788 Pp~~i~ac~mDP~LDD~vmfA~kLr~lG~~v~l~vle~lPH 828 (880)
T KOG4388|consen 788 PPVHIVACAMDPMLDDSVMFARKLRNLGQPVTLRVLEDLPH 828 (880)
T ss_pred CCceEEEeccCcchhHHHHHHHHHHhcCCceeehhhhcCCc
Confidence 37888888888887654 2455555445566777888777
No 280
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=31.20 E-value=63 Score=27.76 Aligned_cols=24 Identities=33% Similarity=0.403 Sum_probs=19.7
Q ss_pred EEEEeChhHHHHHHHHhhch-hhhh
Q 019089 84 ILVGHSAGALVAVNSYFEAP-ERVA 107 (346)
Q Consensus 84 ~lvGhS~GG~ia~~~a~~~p-~~v~ 107 (346)
.++|-|.|+.+|..+|...+ +.+.
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~~~~~~ 58 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVSMEEAC 58 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCCHHHHH
Confidence 88999999999999998654 5543
No 281
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.96 E-value=66 Score=27.93 Aligned_cols=32 Identities=25% Similarity=0.194 Sum_probs=23.3
Q ss_pred HHHHhcccc-eEEEEeChhHHHHHHHHhhchhh
Q 019089 74 FIDILAAEK-AILVGHSAGALVAVNSYFEAPER 105 (346)
Q Consensus 74 ll~~l~~~~-~~lvGhS~GG~ia~~~a~~~p~~ 105 (346)
.+.+.++.+ =.++|.|.|+.++..++...+.+
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 344445553 47889999999999998875544
No 282
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=30.52 E-value=46 Score=26.47 Aligned_cols=35 Identities=23% Similarity=0.139 Sum_probs=20.3
Q ss_pred CCCchhHHHHHHHH----HHHHHh----cccceEEEEeChhHH
Q 019089 59 LNPYSMAFSVLATL----YFIDIL----AAEKAILVGHSAGAL 93 (346)
Q Consensus 59 ~~~ys~~~~~~~~~----~ll~~l----~~~~~~lvGhS~GG~ 93 (346)
...|+-...+..+. .|.+.. .+++++|||.||++.
T Consensus 74 l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 74 LAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp ETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 34566666665553 333333 357899999999987
No 283
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=30.27 E-value=68 Score=27.65 Aligned_cols=25 Identities=32% Similarity=0.440 Sum_probs=19.7
Q ss_pred EEEEeChhHHHHHHHHhhch-hhhhh
Q 019089 84 ILVGHSAGALVAVNSYFEAP-ERVAA 108 (346)
Q Consensus 84 ~lvGhS~GG~ia~~~a~~~p-~~v~~ 108 (346)
.+.|-|.|+.+|..+|...+ +++..
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~~~~~~~ 58 (245)
T cd07218 33 KISGASAGALAACCLLCDLPLGEMTS 58 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCcHHHHHH
Confidence 49999999999999998644 45443
No 284
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=29.53 E-value=42 Score=31.21 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=36.5
Q ss_pred cccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchh-----CHHHHHHHHHHHH
Q 019089 267 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEE-----KVEEFVSIVARFL 328 (346)
Q Consensus 267 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e-----~pe~~~~~i~~fl 328 (346)
+..-.-.+|+|+|+.|+..-.. -.+.+-..+..+...||++|..-+. +-++....|.+|.
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~--f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEP--FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCc--cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 3334456999999999875432 2222223467888999999966552 2234444455553
No 285
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=28.80 E-value=29 Score=30.17 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=12.5
Q ss_pred cccceEEEEeChhHH
Q 019089 79 AAEKAILVGHSAGAL 93 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ 93 (346)
++..+++.|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999975
No 286
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=28.36 E-value=84 Score=28.21 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=18.2
Q ss_pred cccceEEEEeChhHHHHHHHHh
Q 019089 79 AAEKAILVGHSAGALVAVNSYF 100 (346)
Q Consensus 79 ~~~~~~lvGhS~GG~ia~~~a~ 100 (346)
+.++..+.|||+|=+.|+..+-
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999999986654
No 287
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=28.01 E-value=2e+02 Score=26.64 Aligned_cols=83 Identities=23% Similarity=0.327 Sum_probs=51.3
Q ss_pred CEeeccCCC-------CccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 019089 1 MVLFHGFGA-------SVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLY 73 (346)
Q Consensus 1 ivllHG~~~-------~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ 73 (346)
||+|||-+. +...|..+++-+.+ .+ .+-.+|.--.|.-+. +++++-.+..
T Consensus 174 vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~-r~-lip~~D~AYQGF~~G---------------------leeDa~~lR~ 230 (396)
T COG1448 174 VVLLHGCCHNPTGIDPTEEQWQELADLIKE-RG-LIPFFDIAYQGFADG---------------------LEEDAYALRL 230 (396)
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHH-cC-Ceeeeehhhhhhccc---------------------hHHHHHHHHH
Confidence 578887554 45789888777665 33 466667655443221 2223322222
Q ss_pred HHHHhcccceEEEEeChhHHHHHHHHhhchhhhhhheeecc
Q 019089 74 FIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAP 114 (346)
Q Consensus 74 ll~~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p 114 (346)
++.. + +-.+|..|..=..++ |-+||-++.+++.
T Consensus 231 ~a~~-~--~~~lva~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 231 FAEV-G--PELLVASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred HHHh-C--CcEEEEehhhhhhhh-----hhhccceeEEEeC
Confidence 3222 2 228999998877776 7899999999964
No 288
>PRK12467 peptide synthase; Provisional
Probab=26.34 E-value=2.3e+02 Score=35.38 Aligned_cols=94 Identities=18% Similarity=0.022 Sum_probs=54.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILA- 79 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~- 79 (346)
+++.|....+...+..+...+.. +..|+.+..++.-.-.+ ...++...+.....++....
T Consensus 3695 l~~~h~~~r~~~~~~~l~~~l~~--~~~~~~l~~~~~~~d~~-----------------~~~~~~~~~~~y~~~~~~~~~ 3755 (3956)
T PRK12467 3695 LFCRHEGLGTVFDYEPLAVILEG--DRHVLGLTCRHLLDDGW-----------------QDTSLQAMAVQYADYILWQQA 3755 (3956)
T ss_pred eeeechhhcchhhhHHHHHHhCC--CCcEEEEeccccccccC-----------------CccchHHHHHHHHHHHHHhcc
Confidence 46788877777666555555533 35788877665432111 11233333333334444443
Q ss_pred ccceEEEEeChhHHHHHHHHhhc---hhhhhhheeec
Q 019089 80 AEKAILVGHSAGALVAVNSYFEA---PERVAALILIA 113 (346)
Q Consensus 80 ~~~~~lvGhS~GG~ia~~~a~~~---p~~v~~lvli~ 113 (346)
..+..+.|+|+||.++..++..- -+.+.-+.+++
T Consensus 3756 ~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3756 KGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred CCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEe
Confidence 34689999999999999887642 24455444443
No 289
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=26.00 E-value=59 Score=26.22 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=36.5
Q ss_pred cCCccEEEEEeCCCCCc-ChHHHHHHHHhC-CCCeEEEecCCCCCCch-hCHHHHHHHHHHH
Q 019089 269 EISCPVLIVTGDTDRIV-PSWNAERLSRAI-PGSTFEVIKNCGHVPQE-EKVEEFVSIVARF 327 (346)
Q Consensus 269 ~i~~Pvl~i~G~~D~~~-~~~~~~~~~~~~-p~~~~~~i~~~GH~~~~-e~pe~~~~~i~~f 327 (346)
.+.+|+.++.|+.|... +......+.+.. ...++..++ ++|+.++ +++..+.+.|..|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 151 PVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred CCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 46789999999999654 222223344433 356777777 5787764 5666666665554
No 290
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=25.97 E-value=96 Score=27.64 Aligned_cols=30 Identities=27% Similarity=0.209 Sum_probs=23.0
Q ss_pred HhcccceEEEEeChhHHHHHHHHhhchhhh
Q 019089 77 ILAAEKAILVGHSAGALVAVNSYFEAPERV 106 (346)
Q Consensus 77 ~l~~~~~~lvGhS~GG~ia~~~a~~~p~~v 106 (346)
..++..-++.|.|.|+.+|..++..-.+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345666689999999999999887644444
No 291
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.80 E-value=1.4e+02 Score=27.31 Aligned_cols=63 Identities=16% Similarity=0.227 Sum_probs=48.9
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhC--C--CCeEEEecCCCCCCch-hCHHHHHHHHHHHHHHHhC
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAI--P--GSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQRAFG 333 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~--p--~~~~~~i~~~GH~~~~-e~pe~~~~~i~~fl~~~~~ 333 (346)
..+.+.++++.|.++|....+++.++. . +.+-..+.++-|..+. ..|..+.+...+|++....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~ 292 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVIS 292 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccc
Confidence 467899999999999998887774433 2 2344556778897666 8899999999999998653
No 292
>COG4099 Predicted peptidase [General function prediction only]
Probab=25.75 E-value=37 Score=30.11 Aligned_cols=28 Identities=18% Similarity=0.462 Sum_probs=22.9
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCC
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIP 298 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p 298 (346)
+.|+.++|+.+|+++|.++++-..+.+.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHHH
Confidence 4799999999999999998766655443
No 293
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=25.48 E-value=92 Score=27.48 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=27.9
Q ss_pred HHHHHHHhcccc--eEE-EEeChhHHHHHHHHhhchhhhhhheee
Q 019089 71 TLYFIDILAAEK--AIL-VGHSAGALVAVNSYFEAPERVAALILI 112 (346)
Q Consensus 71 ~~~ll~~l~~~~--~~l-vGhS~GG~ia~~~a~~~p~~v~~lvli 112 (346)
+...++.+++++ -+| ||..|||+.-. +|.++-.+|-|+.+.
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCGWG~l~~~-aA~~y~v~V~GvTlS 104 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCGWGGLAIY-AAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCChhHHHHH-HHHHcCCEEEEeeCC
Confidence 556667777654 344 89999999876 555565666666654
No 294
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=25.37 E-value=3e+02 Score=24.10 Aligned_cols=59 Identities=15% Similarity=0.180 Sum_probs=42.6
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCC-CCCCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC-GHVPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~-GH~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
....|||+++.|++-. .++..+.+|+.+.+.+..+ |....--.|++..+.|.+=.++.+
T Consensus 144 g~~gVPV~lvsGD~~~------~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~~~Al 203 (263)
T cd08770 144 AYLGVPVVFVSGDAGL------CAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGVKKAL 203 (263)
T ss_pred hhcCCCEEEEecCHHH------HHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHHHHHH
Confidence 4567999999997542 2334667899988777654 655555788888888887776653
No 295
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.97 E-value=97 Score=26.84 Aligned_cols=28 Identities=29% Similarity=0.492 Sum_probs=21.5
Q ss_pred eEEEEeChhHHHHHHHHhhch-hhhhhhe
Q 019089 83 AILVGHSAGALVAVNSYFEAP-ERVAALI 110 (346)
Q Consensus 83 ~~lvGhS~GG~ia~~~a~~~p-~~v~~lv 110 (346)
-.++|-|.|+.++..++...+ +++..++
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~~~~~~~~~ 62 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLPLDQILQIL 62 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCCHHHHHHHH
Confidence 468999999999999988654 5555443
No 296
>COG4029 Uncharacterized protein conserved in archaea [Function unknown]
Probab=24.97 E-value=3.1e+02 Score=20.76 Aligned_cols=58 Identities=14% Similarity=0.106 Sum_probs=41.4
Q ss_pred CccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHHHH
Q 019089 271 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 331 (346)
Q Consensus 271 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~~ 331 (346)
++-..++-+..+.+.|.+.++++...-+..++. ...-...++.||.....+.+-+.+.
T Consensus 4 ~vtk~ivlapsa~vsp~elv~~l~~~~~PvtiK---eTCfGaii~G~Ed~v~klveriR~~ 61 (142)
T COG4029 4 NVTKYIVLAPSAGVSPKELVQKLLELSPPVTIK---ETCFGAIIDGPEDEVRKLVERIREL 61 (142)
T ss_pred cceEEEEEcCccCcChHHHHHHHHhcCCCeEee---eeeeeeeecCcHHHHHHHHHHHHHh
Confidence 345678889999999999899998877665543 3455667788877666666555543
No 297
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=24.95 E-value=3e+02 Score=21.91 Aligned_cols=59 Identities=14% Similarity=0.258 Sum_probs=46.8
Q ss_pred ccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCCchhCHHHHHHHHHHHHHH
Q 019089 272 CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 330 (346)
Q Consensus 272 ~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~~~e~pe~~~~~i~~fl~~ 330 (346)
.-++++..--|...+....+++.+.+.+.++.++--+|..+--+.-+.+.+.+.+++.+
T Consensus 40 yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 40 YDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPK 98 (160)
T ss_pred CCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhcc
Confidence 45788888888877777788888888888888887788888777778887777777754
No 298
>COG3621 Patatin [General function prediction only]
Probab=24.54 E-value=1.2e+02 Score=27.39 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=23.3
Q ss_pred HHHHHHHhcc----cceEEE-EeChhHHHHHHHHhhch
Q 019089 71 TLYFIDILAA----EKAILV-GHSAGALVAVNSYFEAP 103 (346)
Q Consensus 71 ~~~ll~~l~~----~~~~lv-GhS~GG~ia~~~a~~~p 103 (346)
+...+++... +-+.++ |.|-||.+++.+|+..+
T Consensus 27 ~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 27 KLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred HHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 4455666433 346665 99999999999997543
No 299
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=22.51 E-value=87 Score=29.14 Aligned_cols=36 Identities=25% Similarity=0.163 Sum_probs=30.8
Q ss_pred ceEEEEeChhHHHHHHHHhhchhhhhhheeeccccc
Q 019089 82 KAILVGHSAGALVAVNSYFEAPERVAALILIAPAIL 117 (346)
Q Consensus 82 ~~~lvGhS~GG~ia~~~a~~~p~~v~~lvli~p~~~ 117 (346)
+++++|+|.||++|...|.-.|..|.+++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 789999999999999999889999998877665443
No 300
>COG0218 Predicted GTPase [General function prediction only]
Probab=22.30 E-value=52 Score=27.32 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=14.1
Q ss_pred CCccEEEEEeCCCCCcChH
Q 019089 270 ISCPVLIVTGDTDRIVPSW 288 (346)
Q Consensus 270 i~~Pvl~i~G~~D~~~~~~ 288 (346)
..+|++++.-+-|.+-..+
T Consensus 134 ~~i~~~vv~tK~DKi~~~~ 152 (200)
T COG0218 134 LGIPVIVVLTKADKLKKSE 152 (200)
T ss_pred cCCCeEEEEEccccCChhH
Confidence 3578889999999876533
No 301
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.03 E-value=4e+02 Score=23.36 Aligned_cols=59 Identities=22% Similarity=0.287 Sum_probs=42.0
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCC-C-CCCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC-G-HVPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~-G-H~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
....+||+++.|++= ..++..+..|+.+.+.+..+ | +..---.|++..+.|.+=.++.+
T Consensus 144 g~~gVPV~lVsGDd~------~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~~Al 204 (266)
T cd08663 144 GEYGVPVVLVTGDDA------ACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAAAEAV 204 (266)
T ss_pred hhcCCCEEEEecCHH------HHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHHHHHH
Confidence 356799999999753 22445667899988887664 6 45555778888888887775543
No 302
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=22.03 E-value=1e+02 Score=27.54 Aligned_cols=16 Identities=31% Similarity=0.401 Sum_probs=14.3
Q ss_pred EEEeChhHHHHHHHHh
Q 019089 85 LVGHSAGALVAVNSYF 100 (346)
Q Consensus 85 lvGhS~GG~ia~~~a~ 100 (346)
+.|-|.||.||..++.
T Consensus 45 i~GTStGgiiA~~la~ 60 (308)
T cd07211 45 ICGVSTGAILAFLLGL 60 (308)
T ss_pred EEecChhHHHHHHHhc
Confidence 5699999999998886
No 303
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=21.80 E-value=4e+02 Score=23.34 Aligned_cols=59 Identities=14% Similarity=0.163 Sum_probs=41.1
Q ss_pred ccCCccEEEEEeCCCCCcChHHHHHHHHhCCCCeEEEecCC-CC-CCchhCHHHHHHHHHHHHHHHh
Q 019089 268 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC-GH-VPQEEKVEEFVSIVARFLQRAF 332 (346)
Q Consensus 268 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~-GH-~~~~e~pe~~~~~i~~fl~~~~ 332 (346)
....+||+++.|++-. .+...+.+|+.+.+.+..+ |+ ..---.|++..+.|.+=.++.+
T Consensus 143 g~~gVPV~lvsGDd~~------~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~~Al 203 (265)
T cd00281 143 GYYGVPVVMVAGDAEV------CKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGTEGSL 203 (265)
T ss_pred hhcCCCEEEEecCHHH------HHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHHHHHH
Confidence 4567999999997542 2334667899998888764 75 4444677888888877665543
No 304
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=21.68 E-value=3.3e+02 Score=19.95 Aligned_cols=76 Identities=13% Similarity=0.009 Sum_probs=43.7
Q ss_pred CEeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019089 1 MVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAA 80 (346)
Q Consensus 1 ivllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~~~~~~~~~ys~~~~~~~~~~ll~~l~~ 80 (346)
||.-|| .-+......+..+....-..+.++++.-.. +.......+.+.++.++-
T Consensus 3 ii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~~~------------------------~~~~~~~~l~~~i~~~~~ 56 (116)
T PF03610_consen 3 IIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYPDE------------------------SIEDFEEKLEEAIEELDE 56 (116)
T ss_dssp EEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETTTS------------------------CHHHHHHHHHHHHHHCCT
T ss_pred EEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcCCC------------------------CHHHHHHHHHHHHHhccC
Confidence 466788 333444455566544211368888765211 223344556677777776
Q ss_pred cceEEEEeChhHHHHHHHHhhc
Q 019089 81 EKAILVGHSAGALVAVNSYFEA 102 (346)
Q Consensus 81 ~~~~lvGhS~GG~ia~~~a~~~ 102 (346)
.+-+||=-+++|......+.+.
T Consensus 57 ~~~vlil~Dl~ggsp~n~a~~~ 78 (116)
T PF03610_consen 57 GDGVLILTDLGGGSPFNEAARL 78 (116)
T ss_dssp TSEEEEEESSTTSHHHHHHHHH
T ss_pred CCcEEEEeeCCCCccchHHHHH
Confidence 6666776777777766666543
No 305
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=20.96 E-value=1.5e+02 Score=21.86 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=24.2
Q ss_pred EeeccCCCCccchhhhHHHHhhhCCCeEEEEcCCCCC
Q 019089 2 VLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFG 38 (346)
Q Consensus 2 vllHG~~~~~~~w~~~~~~l~~~~~~~via~Dl~G~G 38 (346)
|+|||-+++.-.. ++..+++..++.++.+|..-..
T Consensus 1 ill~G~~G~GKT~--l~~~la~~l~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKTT--LARALAQYLGFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHHH--HHHHHHHHTTSEEEEEETTHHH
T ss_pred CEEECcCCCCeeH--HHHHHHhhcccccccccccccc
Confidence 6899988887442 3455666567788888866433
No 306
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=20.61 E-value=1.5e+02 Score=19.89 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=18.3
Q ss_pred CEeeccCC-CCccchhhhHHHHhhhCCCeEEEE--cCCCCC
Q 019089 1 MVLFHGFG-ASVFSWNRAMKPLAKTTSSKVLAF--DRPAFG 38 (346)
Q Consensus 1 ivllHG~~-~~~~~w~~~~~~l~~~~~~~via~--Dl~G~G 38 (346)
++++||-. ... +..+..-++..+..++.+ |+.-||
T Consensus 34 ~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 34 MVLVHGGAPKGA---DRIAARWARERGVPVIRFPADWQRHG 71 (71)
T ss_pred EEEEECCCCCCH---HHHHHHHHHHCCCeeEEeCcChhhCC
Confidence 46788855 232 445555555555554443 544443
No 307
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.52 E-value=68 Score=25.68 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=24.3
Q ss_pred EEEeCCCCCcChHHHHHHHHhCCCCeEEEecCCCCCC
Q 019089 276 IVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP 312 (346)
Q Consensus 276 ~i~G~~D~~~~~~~~~~~~~~~p~~~~~~i~~~GH~~ 312 (346)
.+.|++|.++|+.+...+-. +.+.+.++. .+|+.
T Consensus 169 a~v~skDkIFpp~nq~ayw~--~rc~v~ei~-g~H~~ 202 (214)
T COG2830 169 AYVGSKDKIFPPANQHAYWN--ARCAVIEIN-GEHYL 202 (214)
T ss_pred hhccCCCcccCCcchhhhhc--cceeEEEec-CcceE
Confidence 46799999999987665433 456777885 57854
No 308
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.35 E-value=1.5e+02 Score=26.49 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhcc----cceEEEEeC--hhHHHHHHHHhh
Q 019089 68 VLATLYFIDILAA----EKAILVGHS--AGALVAVNSYFE 101 (346)
Q Consensus 68 ~~~~~~ll~~l~~----~~~~lvGhS--~GG~ia~~~a~~ 101 (346)
...+.+++++.++ +++.+||.| ||-.++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4557788998754 579999996 999999877643
Done!