Query 019093
Match_columns 346
No_of_seqs 151 out of 1213
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 06:37:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019093.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019093hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0044 PyrC Dihydroorotase an 100.0 2E-80 4.4E-85 606.8 30.4 323 3-345 50-411 (430)
2 PRK07369 dihydroorotase; Provi 100.0 3.3E-78 7.1E-83 594.1 32.1 326 2-346 53-416 (418)
3 cd01302 Cyclic_amidohydrolases 100.0 1.1E-74 2.4E-79 555.4 29.9 314 2-346 1-337 (337)
4 cd01316 CAD_DHOase The eukaryo 100.0 2.3E-74 5E-79 552.7 30.4 312 2-346 2-324 (344)
5 PRK09059 dihydroorotase; Valid 100.0 3.1E-74 6.8E-79 567.9 32.1 326 2-345 56-418 (429)
6 cd01294 DHOase Dihydroorotase 100.0 6.7E-74 1.4E-78 549.7 33.5 323 4-339 2-333 (335)
7 cd01318 DHOase_IIb Dihydroorot 100.0 4.5E-74 9.8E-79 555.3 31.2 323 2-346 2-357 (361)
8 TIGR00856 pyrC_dimer dihydroor 100.0 3.3E-72 7.1E-77 537.5 34.2 338 2-344 1-341 (341)
9 PRK01211 dihydroorotase; Provi 100.0 2.1E-73 4.6E-78 557.3 26.5 306 3-345 43-380 (409)
10 PRK07627 dihydroorotase; Provi 100.0 5.2E-72 1.1E-76 551.5 31.9 326 2-345 51-413 (425)
11 PRK05451 dihydroorotase; Provi 100.0 3.4E-71 7.5E-76 532.2 35.6 338 2-344 4-344 (345)
12 PLN02599 dihydroorotase 100.0 2E-70 4.4E-75 526.8 35.2 339 2-344 22-363 (364)
13 PRK08417 dihydroorotase; Provi 100.0 2.7E-71 5.8E-76 541.0 29.2 315 2-346 26-377 (386)
14 PLN02795 allantoinase 100.0 7.1E-71 1.5E-75 553.7 29.5 331 2-345 95-479 (505)
15 PRK08044 allantoinase; Provisi 100.0 2E-70 4.3E-75 544.3 30.2 332 2-346 49-425 (449)
16 PRK00369 pyrC dihydroorotase; 100.0 2.9E-70 6.2E-75 532.5 28.3 300 2-346 43-364 (392)
17 PRK04250 dihydroorotase; Provi 100.0 1.6E-68 3.4E-73 522.4 29.9 314 2-346 43-376 (398)
18 PRK06189 allantoinase; Provisi 100.0 8.7E-68 1.9E-72 526.2 30.8 331 2-346 50-423 (451)
19 cd01317 DHOase_IIa Dihydroorot 100.0 6.9E-67 1.5E-71 508.2 32.0 327 2-346 10-374 (374)
20 PRK13404 dihydropyrimidinase; 100.0 3.4E-67 7.5E-72 524.5 30.0 332 2-346 50-436 (477)
21 PRK07575 dihydroorotase; Provi 100.0 5.7E-67 1.2E-71 518.3 30.8 324 2-345 52-411 (438)
22 PRK09060 dihydroorotase; Valid 100.0 1.6E-66 3.5E-71 515.8 31.0 326 2-346 52-414 (444)
23 TIGR00857 pyrC_multi dihydroor 100.0 6.4E-66 1.4E-70 507.2 31.3 329 2-346 35-401 (411)
24 PRK02382 dihydroorotase; Provi 100.0 5.8E-65 1.3E-69 504.9 28.4 323 2-345 50-409 (443)
25 TIGR03178 allantoinase allanto 100.0 5.1E-64 1.1E-68 498.3 29.6 331 2-346 47-420 (443)
26 PRK09236 dihydroorotase; Revie 100.0 3.8E-62 8.3E-67 484.8 29.6 327 2-346 50-418 (444)
27 PLN02942 dihydropyrimidinase 100.0 5.8E-61 1.2E-65 481.0 29.0 329 2-346 53-433 (486)
28 cd01315 L-HYD_ALN L-Hydantoina 100.0 9.5E-61 2E-65 475.4 30.3 331 2-346 48-424 (447)
29 KOG2584 Dihydroorotase and rel 100.0 6.4E-62 1.4E-66 456.1 17.4 333 2-345 62-444 (522)
30 PRK09357 pyrC dihydroorotase; 100.0 5E-60 1.1E-64 467.1 30.7 326 2-345 49-412 (423)
31 cd01314 D-HYD D-hydantoinases 100.0 1.8E-58 3.9E-63 459.0 28.4 333 2-346 47-427 (447)
32 PRK08323 phenylhydantoinase; V 100.0 2.8E-58 6.1E-63 459.0 28.1 333 2-346 45-427 (459)
33 TIGR02033 D-hydantoinase D-hyd 100.0 4.8E-58 1E-62 456.6 27.8 333 2-346 47-429 (454)
34 COG0418 PyrC Dihydroorotase [N 100.0 4.1E-51 8.9E-56 369.3 32.4 342 1-344 3-344 (344)
35 KOG2902 Dihydroorotase [Nucleo 100.0 7.7E-43 1.7E-47 306.1 27.9 337 1-344 3-343 (344)
36 PRK09061 D-glutamate deacylase 100.0 8.6E-41 1.9E-45 336.2 24.2 305 2-338 67-479 (509)
37 cd01297 D-aminoacylase D-amino 100.0 8.9E-38 1.9E-42 307.9 20.3 261 2-314 49-372 (415)
38 TIGR02318 phosphono_phnM phosp 100.0 4.1E-30 8.8E-35 250.0 18.1 271 2-315 44-358 (376)
39 PRK15446 phosphonate metabolis 100.0 2.4E-29 5.1E-34 245.3 15.6 274 2-315 48-362 (383)
40 cd01308 Isoaspartyl-dipeptidas 99.9 2.5E-21 5.4E-26 189.2 20.9 165 149-319 169-364 (387)
41 PRK10657 isoaspartyl dipeptida 99.9 1.1E-20 2.3E-25 184.7 20.1 164 149-317 171-363 (388)
42 PRK12394 putative metallo-depe 99.8 2.5E-19 5.4E-24 174.8 22.8 258 2-314 52-339 (379)
43 cd01307 Met_dep_hydrolase_B Me 99.8 7.2E-18 1.6E-22 162.0 23.1 255 2-314 30-314 (338)
44 PRK13985 ureB urease subunit b 99.8 4.3E-19 9.3E-24 176.3 14.3 263 2-320 125-444 (568)
45 PRK13206 ureC urease subunit a 99.8 2.2E-18 4.8E-23 172.4 18.4 154 2-187 131-295 (573)
46 PRK13308 ureC urease subunit a 99.8 3.7E-18 7.9E-23 170.2 19.1 153 2-187 129-292 (569)
47 TIGR01178 ade adenine deaminas 99.8 1.7E-17 3.7E-22 168.3 22.4 248 2-319 46-320 (552)
48 cd00375 Urease_alpha Urease al 99.8 8.1E-18 1.8E-22 167.7 19.5 144 2-177 125-276 (567)
49 PRK13207 ureC urease subunit a 99.8 1.6E-17 3.4E-22 166.7 19.0 153 2-186 125-291 (568)
50 PRK13309 ureC urease subunit a 99.8 2.6E-17 5.7E-22 165.4 19.7 269 2-319 129-447 (572)
51 PF12890 DHOase: Dihydro-orota 99.7 1.5E-18 3.2E-23 140.2 3.9 124 2-180 2-142 (142)
52 cd01298 ATZ_TRZ_like TRZ/ATZ f 99.7 1.3E-15 2.7E-20 149.5 19.4 197 94-333 176-390 (411)
53 cd01295 AdeC Adenine deaminase 99.7 3.9E-15 8.5E-20 147.3 22.3 244 2-314 5-272 (422)
54 PRK09237 dihydroorotase; Provi 99.7 7.1E-15 1.5E-19 143.4 23.4 251 2-314 49-333 (380)
55 PRK07583 cytosine deaminase-li 99.6 8E-15 1.7E-19 145.8 18.2 193 82-314 186-397 (438)
56 TIGR01792 urease_alph urease, 99.6 6E-15 1.3E-19 148.3 16.4 155 2-187 124-288 (567)
57 PF13147 Amidohydro_4: Amidohy 99.6 1.4E-15 2.9E-20 140.7 10.7 262 2-311 5-304 (304)
58 cd01299 Met_dep_hydrolase_A Me 99.6 1.2E-14 2.6E-19 139.5 16.6 187 83-314 124-332 (342)
59 cd01292 metallo-dependent_hydr 99.6 2.5E-14 5.4E-19 130.9 17.7 218 29-300 46-275 (275)
60 PLN02303 urease 99.6 7.6E-15 1.6E-19 151.2 12.8 119 2-139 394-519 (837)
61 TIGR01975 isoAsp_dipep isoaspa 99.6 1.6E-13 3.4E-18 134.1 21.4 271 2-316 52-363 (389)
62 PRK07228 N-ethylammeline chlor 99.6 2E-14 4.3E-19 143.1 14.8 158 117-317 199-379 (445)
63 TIGR03583 EF_0837 probable ami 99.6 5.7E-13 1.2E-17 129.4 21.9 132 2-141 46-189 (365)
64 PF01979 Amidohydro_1: Amidohy 99.4 1.7E-13 3.7E-18 130.1 4.4 111 198-314 193-333 (333)
65 cd00854 NagA N-acetylglucosami 99.4 8.9E-12 1.9E-16 121.5 15.0 266 2-320 47-368 (374)
66 cd01296 Imidazolone-5PH Imidaz 99.4 9.3E-11 2E-15 113.9 21.1 159 94-314 178-348 (371)
67 cd01304 FMDH_A Formylmethanofu 99.3 2E-10 4.4E-15 114.8 23.0 43 284-326 427-477 (541)
68 cd01306 PhnM PhnM is believed 99.3 7.4E-10 1.6E-14 105.6 23.4 271 5-314 1-310 (325)
69 PRK10027 cryptic adenine deami 99.2 1.8E-09 3.8E-14 110.4 21.8 242 2-314 80-347 (588)
70 TIGR00221 nagA N-acetylglucosa 99.2 2.2E-10 4.7E-15 111.8 14.3 71 2-73 52-131 (380)
71 TIGR01224 hutI imidazoloneprop 99.2 5E-09 1.1E-13 102.0 21.7 163 92-314 180-352 (377)
72 PRK08203 hydroxydechloroatrazi 99.1 1.1E-08 2.4E-13 102.1 20.1 159 117-314 214-388 (451)
73 TIGR03121 one_C_dehyd_A formyl 99.1 1.7E-08 3.7E-13 101.6 20.7 32 283-314 429-467 (556)
74 PRK09356 imidazolonepropionase 99.1 1.3E-08 2.7E-13 100.2 19.7 147 117-314 222-378 (406)
75 PRK11170 nagA N-acetylglucosam 99.1 4.3E-09 9.4E-14 102.8 15.6 71 2-74 49-132 (382)
76 PRK14085 imidazolonepropionase 99.0 3.6E-08 7.7E-13 96.5 20.6 160 94-315 192-362 (382)
77 COG3964 Predicted amidohydrola 99.0 4.8E-08 1E-12 89.9 18.8 252 3-314 54-337 (386)
78 PRK08393 N-ethylammeline chlor 99.0 5.2E-08 1.1E-12 96.6 20.8 175 117-333 189-384 (424)
79 PRK06687 chlorohydrolase; Vali 99.0 3E-08 6.5E-13 98.1 19.0 171 96-314 180-372 (419)
80 PRK07572 cytosine deaminase; V 99.0 6E-08 1.3E-12 96.2 20.7 166 117-314 191-376 (426)
81 PRK09045 N-ethylammeline chlor 99.0 1.4E-07 3E-12 94.0 23.3 162 117-319 202-384 (443)
82 TIGR02967 guan_deamin guanine 99.0 7.9E-08 1.7E-12 94.5 20.8 155 117-314 186-361 (401)
83 PRK05985 cytosine deaminase; P 99.0 5.2E-08 1.1E-12 95.6 19.1 154 117-314 191-363 (391)
84 PRK09230 cytosine deaminase; P 99.0 1.2E-07 2.6E-12 94.2 21.7 168 117-314 195-380 (426)
85 cd01309 Met_dep_hydrolase_C Me 98.9 8.6E-08 1.9E-12 93.0 19.7 165 118-338 181-357 (359)
86 PRK06151 N-ethylammeline chlor 98.9 1.3E-07 2.8E-12 95.5 20.7 157 117-319 221-407 (488)
87 PRK08204 hypothetical protein; 98.9 5.9E-07 1.3E-11 89.6 23.0 155 117-314 201-380 (449)
88 PRK15493 5-methylthioadenosine 98.9 5.9E-07 1.3E-11 89.5 22.7 156 117-314 197-372 (435)
89 cd01293 Bact_CD Bacterial cyto 98.9 4.3E-07 9.3E-12 88.6 21.1 166 117-314 189-374 (398)
90 COG1228 HutI Imidazolonepropio 98.9 4.5E-08 9.8E-13 96.2 14.2 89 235-340 302-401 (406)
91 cd01310 TatD_DNAse TatD like p 98.8 2.2E-07 4.8E-12 84.8 17.4 233 8-302 1-251 (251)
92 cd01300 YtcJ_like YtcJ_like me 98.8 1.2E-07 2.6E-12 95.4 14.9 166 117-312 295-479 (479)
93 PRK07203 putative chlorohydrol 98.8 1.2E-06 2.6E-11 87.4 21.5 151 117-314 205-378 (442)
94 PRK07213 chlorohydrolase; Prov 98.8 1.6E-06 3.5E-11 84.6 21.5 150 117-314 179-343 (375)
95 PRK12393 amidohydrolase; Provi 98.7 1.9E-06 4.1E-11 86.4 22.1 154 117-314 218-392 (457)
96 PRK09228 guanine deaminase; Pr 98.7 5.6E-06 1.2E-10 82.4 22.2 154 117-314 211-386 (433)
97 cd01313 Met_dep_hydrolase_E Me 98.6 9.5E-06 2.1E-10 80.4 23.3 151 117-314 207-383 (418)
98 PRK06846 putative deaminase; V 98.6 5.3E-06 1.1E-10 82.0 21.0 23 117-139 206-228 (410)
99 cd01303 GDEase Guanine deamina 98.6 1.1E-05 2.4E-10 80.2 23.1 154 117-314 208-389 (429)
100 TIGR03314 Se_ssnA putative sel 98.6 5.4E-06 1.2E-10 82.7 19.9 162 117-324 204-389 (441)
101 cd01312 Met_dep_hydrolase_D Me 98.6 1.9E-05 4E-10 77.4 23.1 155 117-314 163-352 (381)
102 PRK06380 metal-dependent hydro 98.5 2.7E-05 5.9E-10 77.0 22.4 161 117-314 186-361 (418)
103 PRK09229 N-formimino-L-glutama 98.4 8.2E-05 1.8E-09 74.5 23.9 156 117-314 216-393 (456)
104 PRK06038 N-ethylammeline chlor 98.4 1.8E-05 3.9E-10 78.7 18.5 154 117-314 190-364 (430)
105 PRK08418 chlorohydrolase; Prov 98.4 6.4E-05 1.4E-09 74.3 21.8 153 117-314 190-375 (408)
106 TIGR02022 hutF formiminoglutam 98.4 7.5E-05 1.6E-09 74.9 22.5 151 117-314 216-393 (455)
107 PF04909 Amidohydro_2: Amidohy 98.3 1.4E-05 3.1E-10 73.4 13.5 192 67-303 71-273 (273)
108 COG1001 AdeC Adenine deaminase 98.3 1.1E-05 2.3E-10 81.0 12.6 252 2-319 73-347 (584)
109 TIGR00010 hydrolase, TatD fami 98.3 3.4E-05 7.3E-10 70.5 15.0 143 117-303 108-252 (252)
110 cd01311 PDC_hydrolase 2-pyrone 98.3 0.00037 8.1E-09 64.6 22.1 97 81-199 82-187 (263)
111 COG2159 Predicted metal-depend 98.2 0.00014 3E-09 68.7 18.0 184 67-304 99-291 (293)
112 COG1574 Predicted metal-depend 98.2 0.00012 2.5E-09 74.3 17.9 193 112-340 317-532 (535)
113 cd01305 archeal_chlorohydrolas 98.1 0.00025 5.4E-09 65.6 18.1 136 119-300 127-263 (263)
114 COG0402 SsnA Cytosine deaminas 98.1 0.00011 2.4E-09 72.8 15.6 158 117-314 198-373 (421)
115 COG3653 N-acyl-D-aspartate/D-g 98.1 0.0011 2.4E-08 64.2 21.1 31 284-314 474-511 (579)
116 COG1820 NagA N-acetylglucosami 98.0 2.2E-05 4.7E-10 75.6 9.3 36 285-320 326-369 (380)
117 PF07969 Amidohydro_3: Amidohy 97.9 0.00018 3.9E-09 70.5 14.2 161 117-312 225-404 (404)
118 PF13594 Amidohydro_5: Amidohy 97.9 5.1E-06 1.1E-10 60.8 1.6 34 2-35 30-68 (68)
119 PRK06886 hypothetical protein; 97.9 0.0013 2.8E-08 63.1 18.0 157 117-304 162-328 (329)
120 PRK10812 putative DNAse; Provi 97.7 0.006 1.3E-07 56.8 19.4 119 8-140 3-134 (265)
121 cd00530 PTE Phosphotriesterase 97.3 0.0036 7.8E-08 58.7 12.6 153 117-301 136-293 (293)
122 PF01026 TatD_DNase: TatD rela 97.3 0.0094 2E-07 55.0 15.1 233 9-302 1-255 (255)
123 COG0084 TatD Mg-dependent DNas 97.2 0.05 1.1E-06 50.3 18.8 138 117-303 112-256 (256)
124 PRK11449 putative deoxyribonuc 97.2 0.053 1.2E-06 50.2 18.6 138 117-303 114-258 (258)
125 COG0804 UreC Urea amidohydrola 97.2 0.0029 6.2E-08 61.0 9.9 157 2-188 125-290 (568)
126 COG3454 Metal-dependent hydrol 96.8 0.0021 4.5E-08 60.4 5.8 64 232-314 286-358 (377)
127 PRK09875 putative hydrolase; P 96.6 0.054 1.2E-06 51.1 13.8 146 117-302 139-292 (292)
128 COG1099 Predicted metal-depend 96.6 0.028 6E-07 50.3 10.9 151 8-182 2-171 (254)
129 PRK10425 DNase TatD; Provision 96.6 0.49 1.1E-05 43.9 19.8 36 268-303 221-258 (258)
130 KOG3968 Atrazine chlorohydrola 96.4 0.04 8.7E-07 53.6 11.5 72 234-317 316-400 (439)
131 cd01308 Isoaspartyl-dipeptidas 94.9 0.093 2E-06 51.2 7.9 176 2-201 50-255 (387)
132 COG1831 Predicted metal-depend 93.1 2 4.4E-05 39.7 12.1 135 117-304 145-283 (285)
133 PF02126 PTE: Phosphotriestera 92.4 0.24 5.1E-06 47.2 5.4 152 117-301 142-307 (308)
134 smart00518 AP2Ec AP endonuclea 90.0 8.6 0.00019 35.4 13.3 112 82-198 13-142 (273)
135 cd01320 ADA Adenosine deaminas 89.5 19 0.00042 34.1 17.8 68 117-198 173-241 (325)
136 COG4464 CapC Capsular polysacc 88.6 1.2 2.6E-05 39.9 5.9 47 8-54 1-58 (254)
137 PF07969 Amidohydro_3: Amidohy 87.6 0.2 4.3E-06 49.0 0.5 15 3-17 1-15 (404)
138 COG1735 Php Predicted metal-de 87.5 6.4 0.00014 37.2 10.3 155 117-303 152-314 (316)
139 KOG4245 Predicted metal-depend 86.0 5 0.00011 35.5 8.2 192 82-305 82-289 (297)
140 PTZ00372 endonuclease 4-like p 84.6 45 0.00097 33.1 18.2 124 66-198 131-277 (413)
141 COG1229 FwdA Formylmethanofura 84.5 0.86 1.9E-05 44.5 3.1 53 285-338 439-507 (575)
142 KOG3892 N-acetyl-glucosamine-6 84.3 1.1 2.3E-05 41.6 3.5 49 273-321 336-394 (407)
143 cd01300 YtcJ_like YtcJ_like me 84.2 0.4 8.6E-06 48.3 0.8 16 2-17 34-49 (479)
144 TIGR01430 aden_deam adenosine 83.9 36 0.00078 32.2 14.1 67 117-199 172-241 (324)
145 PRK01060 endonuclease IV; Prov 81.4 44 0.00095 30.7 14.2 111 84-199 17-149 (281)
146 COG1574 Predicted metal-depend 80.4 0.51 1.1E-05 48.3 -0.1 16 2-17 59-74 (535)
147 PF03102 NeuB: NeuB family; I 80.4 22 0.00047 32.6 10.5 73 81-177 78-150 (241)
148 PRK09358 adenosine deaminase; 76.4 72 0.0016 30.4 17.2 69 117-199 182-251 (340)
149 PF10566 Glyco_hydro_97: Glyco 71.8 5 0.00011 37.5 4.0 48 84-139 111-159 (273)
150 TIGR03569 NeuB_NnaB N-acetylne 68.6 89 0.0019 30.0 11.9 72 81-177 98-172 (329)
151 COG3454 Metal-dependent hydrol 68.6 24 0.00052 33.8 7.6 92 3-94 46-157 (377)
152 COG2089 SpsE Sialic acid synth 68.0 62 0.0013 31.1 10.2 18 81-99 112-129 (347)
153 cd01301 rDP_like renal dipepti 67.6 25 0.00055 33.4 7.9 133 164-299 164-308 (309)
154 TIGR00587 nfo apurinic endonuc 64.3 1.2E+02 0.0026 28.0 14.5 102 68-177 3-111 (274)
155 PF07071 DUF1341: Protein of u 60.8 25 0.00054 31.3 5.8 72 85-177 141-212 (218)
156 TIGR03581 EF_0839 conserved hy 58.2 45 0.00098 30.0 7.1 72 85-177 141-212 (236)
157 PF00701 DHDPS: Dihydrodipicol 58.2 56 0.0012 30.4 8.4 10 239-248 179-188 (289)
158 COG1229 FwdA Formylmethanofura 56.9 4.9 0.00011 39.5 0.9 15 2-16 52-66 (575)
159 TIGR02313 HpaI-NOT-DapA 2,4-di 56.0 74 0.0016 29.9 8.8 30 177-206 81-112 (294)
160 COG3618 Predicted metal-depend 55.9 1.8E+02 0.0039 27.3 19.4 49 117-178 124-172 (279)
161 cd00019 AP2Ec AP endonuclease 55.6 1.7E+02 0.0036 26.8 12.9 16 161-176 92-107 (279)
162 PTZ00124 adenosine deaminase; 55.5 2.1E+02 0.0045 27.9 13.7 71 117-198 206-277 (362)
163 TIGR00683 nanA N-acetylneurami 53.1 1E+02 0.0022 28.9 9.1 35 174-208 79-115 (290)
164 cd00951 KDGDH 5-dehydro-4-deox 51.5 1.2E+02 0.0025 28.4 9.3 9 130-138 69-77 (289)
165 PRK03170 dihydrodipicolinate s 50.8 1.1E+02 0.0023 28.6 8.9 11 266-276 203-213 (292)
166 cd01321 ADGF Adenosine deamina 50.6 2.4E+02 0.0052 27.2 14.3 74 117-199 179-254 (345)
167 TIGR00674 dapA dihydrodipicoli 50.0 92 0.002 29.0 8.4 10 266-275 200-209 (285)
168 TIGR03586 PseI pseudaminic aci 49.2 2.5E+02 0.0054 27.0 12.2 45 81-139 99-143 (327)
169 PLN02417 dihydrodipicolinate s 49.1 1.1E+02 0.0024 28.4 8.7 10 266-275 198-207 (280)
170 cd00408 DHDPS-like Dihydrodipi 46.7 1.2E+02 0.0025 28.0 8.5 9 131-139 67-75 (281)
171 cd00952 CHBPH_aldolase Trans-o 44.9 1.2E+02 0.0025 28.8 8.3 11 239-249 186-196 (309)
172 cd00954 NAL N-Acetylneuraminic 44.2 1.5E+02 0.0033 27.6 8.9 8 131-138 71-78 (288)
173 PRK04147 N-acetylneuraminate l 41.4 1.7E+02 0.0037 27.3 8.7 28 177-204 85-114 (293)
174 TIGR03249 KdgD 5-dehydro-4-deo 40.5 2E+02 0.0044 26.9 9.1 47 86-138 33-82 (296)
175 COG1312 UxuA D-mannonate dehyd 38.5 1.6E+02 0.0034 28.5 7.8 23 120-142 195-217 (362)
176 cd00443 ADA_AMPD Adenosine/AMP 37.9 3.5E+02 0.0075 25.4 16.2 68 117-199 153-222 (305)
177 PRK12738 kbaY tagatose-bisphos 37.8 1.6E+02 0.0036 27.7 7.9 25 226-253 157-184 (286)
178 KOG0333 U5 snRNP-like RNA heli 36.2 1E+02 0.0022 31.7 6.4 82 149-257 500-584 (673)
179 PRK03620 5-dehydro-4-deoxygluc 36.0 2.6E+02 0.0057 26.2 9.2 47 86-138 35-84 (303)
180 cd00950 DHDPS Dihydrodipicolin 35.7 2.3E+02 0.005 26.1 8.6 50 85-140 27-79 (284)
181 cd00953 KDG_aldolase KDG (2-ke 33.3 3.1E+02 0.0067 25.4 9.0 27 176-202 76-104 (279)
182 COG0191 Fba Fructose/tagatose 30.1 2.1E+02 0.0045 27.0 7.1 22 117-138 29-50 (286)
183 PF00962 A_deaminase: Adenosin 29.8 4.7E+02 0.01 24.5 14.4 66 118-199 181-249 (331)
184 COG1197 Mfd Transcription-repa 29.6 47 0.001 37.1 3.2 93 153-247 602-704 (1139)
185 PRK06361 hypothetical protein; 29.2 1.9E+02 0.004 25.4 6.6 19 285-303 192-210 (212)
186 TIGR00695 uxuA mannonate dehyd 28.2 1.3E+02 0.0027 29.8 5.6 25 118-142 215-239 (394)
187 cd00127 DSPc Dual specificity 26.9 2.4E+02 0.0053 22.3 6.5 54 118-188 69-122 (139)
188 COG2089 SpsE Sialic acid synth 26.7 3.3E+02 0.0072 26.2 7.8 102 117-238 160-265 (347)
189 TIGR01858 tag_bisphos_ald clas 26.1 2.2E+02 0.0049 26.7 6.7 22 119-140 60-82 (282)
190 PRK09195 gatY tagatose-bisphos 24.2 2.4E+02 0.0052 26.5 6.5 25 226-253 157-184 (284)
191 PRK12857 fructose-1,6-bisphosp 23.3 2.6E+02 0.0057 26.2 6.6 23 118-140 61-84 (284)
192 PF03786 UxuA: D-mannonate deh 22.5 97 0.0021 30.1 3.6 24 119-142 188-211 (351)
193 TIGR03569 NeuB_NnaB N-acetylne 21.9 5.1E+02 0.011 24.9 8.4 106 113-237 143-252 (329)
194 PRK12737 gatY tagatose-bisphos 20.9 3.3E+02 0.0071 25.6 6.7 22 119-140 62-84 (284)
195 PRK00912 ribonuclease P protei 20.6 3.4E+02 0.0073 24.4 6.6 61 230-305 157-218 (237)
No 1
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2e-80 Score=606.83 Aligned_cols=323 Identities=26% Similarity=0.289 Sum_probs=284.4
Q ss_pred EEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093 3 LTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL 76 (346)
Q Consensus 3 ~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~ 76 (346)
+|+||+||+|||||+ |.++||||+|+| ||+|||++||||.|+++++++++.+.+++++.+. |||++|+++
T Consensus 50 ~v~PG~ID~HVH~repg~~~ke~~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~i-- 125 (430)
T COG0044 50 LVLPGLVDLHVHFREPGFEHKETFETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSV--VDYAFYGGL-- 125 (430)
T ss_pred EEccCeeEEEEecCCCCcchhhhHHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccce--eEEEEEEEE--
Confidence 799999999999999 999999999985 9999999999999999999999999988876555 999999998
Q ss_pred CCCCCH-HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C----
Q 019093 77 TDTTSP-DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---- 145 (346)
Q Consensus 77 ~~~~~~-~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---- 145 (346)
+.+... .++.++ +.+.++|+||.+. .+..+. ..+++.|++++..|.++++||||++++. +
T Consensus 126 t~~~~~~~~~~~~---~~~~g~~~F~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g~~~~ 196 (430)
T COG0044 126 TKGNLGKLELTER---GVEAGFKGFMDDS-----TGALDD-DVLEEALEYAAELGALILVHAEDDDLIAEGVMNEGLRAP 196 (430)
T ss_pred eccccchhhhhhh---hhccceEEEecCC-----cCcCCH-HHHHHHHHHHHhcCCeEEEecCChhHhhhHHHhcCccch
Confidence 544322 233333 2247889999642 133355 7899999999999999999999997531 1
Q ss_pred -------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCc
Q 019093 146 -------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPH 216 (346)
Q Consensus 146 -------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~ 216 (346)
...+|..+++|.+ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.. +++.
T Consensus 197 ~~~~~~~p~~aE~~~iar~~--~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~--~~~~ 272 (430)
T COG0044 197 ELGLAGRPPIAEASAIARDL--ELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED--LGTL 272 (430)
T ss_pred hhccCCCChHHHHHHHHHHH--HHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhc--cCcc
Confidence 1468999999999 8999999999999999999999999999 7999999999999999999875 6799
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHHH
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEAF 292 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~ 292 (346)
+|||||||+++||++||++|++|+||+ |+||||||+.++|..+|. ++|++|+|+.||++|+ ++++ .+|++++++
T Consensus 273 ~k~nPPLR~~~dr~aL~~~l~~G~ID~-iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~ 350 (430)
T COG0044 273 AKVNPPLRDEEDREALWEALKDGVIDV-IASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVEL 350 (430)
T ss_pred eEECCCCCCHHHHHHHHHHHhCCCCcE-EEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHH
Confidence 999999999999999999999999999 999999999999986654 4699999999999998 4443 489999999
Q ss_pred HchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 293 TSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 293 ~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
+|.||||+|||+.| +|||+||| ++|+|+++.++||++|||| +|++++|+|++
T Consensus 351 ~S~nPA~ifgl~~~g~i~~G~~ADl~lvD~~~~~~i~~~~~~sk~~~sPf-~G~~~~g~v~~ 411 (430)
T COG0044 351 LSTNPARIFGLPPKGAIEEGADADLVLVDPDEEWTIRAEELYSKAKNSPF-EGFELKGRVVA 411 (430)
T ss_pred HhhCHHHHhCCCCCCcccCCCccCEEEEcCCCCeEEchhhhccccCCCCc-CCCEEeeeEEE
Confidence 99999999999533 89999999 8999999999999999999 79999999986
No 2
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=3.3e-78 Score=594.14 Aligned_cols=326 Identities=19% Similarity=0.167 Sum_probs=287.4
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|||+|+ +..++||+.+++ ||||||++|||+.|++++.+.++.+++++++.+. |||.+|+++.
T Consensus 53 ~~vlPG~ID~H~H~~~~~~~~~e~~~s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~ 130 (418)
T PRK07369 53 LILGPGLVDLYSHSGEPGFEERETLASLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPP--VQLHFWGALT 130 (418)
T ss_pred CEEecCEEecccccCCCCcCCCccHHHHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCc--eeEEEEEEEe
Confidence 4899999999999999 888999998865 9999999999999999999999998888776554 9999999874
Q ss_pred eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093 76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D--- 145 (346)
Q Consensus 76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~--- 145 (346)
.. .+.+.++|.+|.+.| +++||.+ .++.+. ..++++|++++++|+++++||||++++. +
T Consensus 131 ~~~~~~~~~ei~~l~~~G-v~~f~~~---------~~~~~~-~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~g~~~ 199 (418)
T PRK07369 131 LGGQGKQLTELAELAAAG-VVGFTDG---------QPLENL-ALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMREGLLA 199 (418)
T ss_pred eCCCCccHhhHHHHHHCC-CEEEECC---------CcCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhcCcccCChhH
Confidence 21 223577899998888 7899832 233455 7899999999999999999999988731 1
Q ss_pred --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
+..+|.+++.|++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.. +++
T Consensus 200 ~~~~~~~~p~~aE~~av~r~~--~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~--~~~ 275 (418)
T PRK07369 200 LRLGLPGDPASAETTALAALL--ELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS--YDP 275 (418)
T ss_pred HHhCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc--cCC
Confidence 2468999999999 8999999999999999999999999988 7899999999999999999864 468
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEA 291 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~ 291 (346)
++|||||||+++||++||++|++|+||+ |+||||||+.++|..+|+ .+|++|+|+.||++++.++++ .+++++++
T Consensus 276 ~~kv~PPLR~~~d~~aL~~~l~~G~Id~-i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~ 354 (418)
T PRK07369 276 NLRLDPPLGNPSDRQALIEGVRTGVIDA-IAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQ 354 (418)
T ss_pred CcEECCCCCCHHHHHHHHHHHhcCCCCE-EEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 8999999999999999999999999999 999999999999976665 359999999999999766643 48999999
Q ss_pred HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++|.||||+|||+.+ +|||+|+| ++|+|++++++|+++|||| +|++++|||+++
T Consensus 355 ~~s~nPA~~lgl~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t 416 (418)
T PRK07369 355 ALSTNPARCLGQEPPSLAPGQPAELILFDPQKTWTVSAQTLHSLSRNTPW-LGQTLKGRVLQT 416 (418)
T ss_pred HHHHhHHHHhCCCcCcccCCCcCCEEEEcCCCCEEECcccccCCCCCCCC-CCCEeeeEEEEE
Confidence 999999999999632 89999999 8999999999999999999 799999999863
No 3
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=1.1e-74 Score=555.36 Aligned_cols=314 Identities=22% Similarity=0.260 Sum_probs=276.3
Q ss_pred eEEecCccccceecCC-Ccc-ccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDL-LKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~-~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++||||+||+|||+|+ |.+ ++|||+|++ ||||||++|||+.|++++.+.++.+.+++++.+. |||++|+++
T Consensus 1 ~~vlPG~iD~HvH~r~pg~~~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~ 78 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPGGTTYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSY--VDFSFHAGI 78 (337)
T ss_pred CEecCCeeEeeeccCCCCCCCchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcE--eeEEEEEec
Confidence 4899999999999999 777 899999975 9999999999999999999999988888766544 899999887
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI 154 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av 154 (346)
+++.+.+||.++.++| +.|||+|+++. .+.....++ ..++++|+++++.|+++++|||
T Consensus 79 --~~~~~~~el~~l~~~G-v~g~K~f~~~~--~~~~~~~~~-~~l~~~~~~~~~~g~~v~~H~E---------------- 136 (337)
T cd01302 79 --GPGDVTDELKKLFDAG-INSLKVFMNYY--FGELFDVDD-GTLMRTFLEIASRGGPVMVHAE---------------- 136 (337)
T ss_pred --cCccCHHHHHHHHHcC-CcEEEEEEecc--CCCccccCH-HHHHHHHHHHHhcCCeEEEeHH----------------
Confidence 5544688999998889 78999999642 111212344 7899999999999999999999
Q ss_pred HHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHH
Q 019093 155 DTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAV 232 (346)
Q Consensus 155 ~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL 232 (346)
+.+ .+++.+|+|+||+|+|+++++++|+++| |.+||||||||||+|+++++.. +++++|||||||+++||++|
T Consensus 137 -r~~--~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~--~~~~~k~~Pplr~~~~~~~L 211 (337)
T cd01302 137 -RAA--QLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL--NGAWGKVNPPLRSKEDREAL 211 (337)
T ss_pred -HHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhC--CCceEEEeCCCCCHHHHHHH
Confidence 455 6888899999999999999999999987 8999999999999999999864 46899999999999999999
Q ss_pred HHHHHcCCccEEeecCCCCCCcccccc--CCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCC-CCC
Q 019093 233 VSAVTSGSRKFFLGTDSAPHERGRKEC--ACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGL-PRN 306 (346)
Q Consensus 233 ~~al~~G~Id~~i~SDHaP~~~~~K~~--~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl-~~k 306 (346)
|++|++|.||+ |+|||+||+.++|.. +|. .+|++|+|+.+|++++.+++. .+++++++++|.||||+||| +++
T Consensus 212 ~~~l~~G~id~-i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~~~~~~~~i~~~~~~~~~s~~pA~~~gl~~~g 290 (337)
T cd01302 212 WEGVKNGKIDT-IASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILLTEGVKRGLSLETLVEILSENPARIFGLYPKG 290 (337)
T ss_pred HHHHhCCCCCE-EecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999 999999999988864 343 359999999999999766664 48999999999999999999 433
Q ss_pred ------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 307 ------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 307 ------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+|||+||| .+|+|+.++++|+++|||| +|++++|||+++
T Consensus 291 ~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t 337 (337)
T cd01302 291 TIAVGYDADLVIVDPKKEWKVTAEEIESKADWTPF-EGMEVTGKPVST 337 (337)
T ss_pred ccccCCcCCEEEEeCCCcEEEcHHHhcccCCCCCc-CCcEEEEEEEEC
Confidence 89999999 8999999999999999999 799999999874
No 4
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=2.3e-74 Score=552.67 Aligned_cols=312 Identities=17% Similarity=0.224 Sum_probs=263.9
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++||||+||+|||+|+ |.+++|||+|+| ||||||++||||.|++++.+.++.+.+++++.+. +||++|+++
T Consensus 2 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~--vd~~~~~~~- 78 (344)
T cd01316 2 TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKAR--CDYAFSIGA- 78 (344)
T ss_pred eEEeCCeEEeeeccCCCCcCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcE--EeEEEEeee-
Confidence 6899999999999999 999999999975 9999999999999999999999999888776554 999999776
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID 155 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~ 155 (346)
+.+ +.+++.+|.. + +.|||+|+.+. .....+++ ...++.+.+....+.++.+|+|+. .+.
T Consensus 79 -~~~-~~~~~~~l~~-~-~~g~k~f~~~~--~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~e~~------------~~~ 138 (344)
T cd01316 79 -TST-NAATVGELAS-E-AVGLKFYLNET--FSTLILDK--ITAWASHFNAWPSTKPIVTHAKSQ------------TLA 138 (344)
T ss_pred -cCC-CHHHHHHHHh-c-cCeEEEEECCC--CCCCccch--HHHHHHHHHhcccCCCeEEehhhH------------HHH
Confidence 443 4566777754 3 58999998542 11222334 233344444545588999999975 356
Q ss_pred HHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHH
Q 019093 156 TILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVV 233 (346)
Q Consensus 156 ~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~ 233 (346)
+++ .+++.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.. +.+|||||||+++||++||
T Consensus 139 ~~l--~la~~~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~----~~~k~~PPLR~~~dr~aL~ 212 (344)
T cd01316 139 AVL--LLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR----GQYEVRPFLPTREDQEALW 212 (344)
T ss_pred HHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc----CCceeCCCCcCHHHHHHHH
Confidence 778 8999999999999999999999999988 7899999999999999999853 5799999999999999999
Q ss_pred HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCCCccEEE
Q 019093 234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRNTSKIKL 312 (346)
Q Consensus 234 ~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~kdAdlvi 312 (346)
++|. +||+ |+||||||+.++|..+...+|++|+|++||++|+.+.+ +++|+++++++|.||||+|||+.+++||+|
T Consensus 213 ~~l~--~id~-i~SDHaP~~~~~K~~~~a~~G~~g~e~~lpl~~~~v~~~~i~l~~l~~~~s~nPAk~~gl~~~~~~lvi 289 (344)
T cd01316 213 ENLD--YIDC-FATDHAPHTLAEKTGNKPPPGFPGVETSLPLLLTAVHEGRLTIEDIVDRLHTNPKRIFNLPPQSDTYVE 289 (344)
T ss_pred HHHh--cCCE-EEcCCCCCCHHHhcCCCCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHHhCCCCCCCCEEE
Confidence 9994 6999 99999999999986443346999999999999986444 358999999999999999999544579999
Q ss_pred Ee--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 313 TK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 313 ~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
|| ++|+|+++.++|+++|||| +|++++|+|+++
T Consensus 290 ~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t 324 (344)
T cd01316 290 VDLDEEWTIPKNPLQSKKGWTPF-EGKKVKGKVQRV 324 (344)
T ss_pred EeCCCcEEEChhhccccCCCCCC-CCCEEeeEEEEE
Confidence 99 9999999999999999999 799999999863
No 5
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=3.1e-74 Score=567.94 Aligned_cols=326 Identities=18% Similarity=0.181 Sum_probs=282.7
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +.++++++.+++ |||||+++|||+.|+.++.+.++.+.+.+++.+. +||.+++++.
T Consensus 56 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~~ 133 (429)
T PRK09059 56 KAVAPGLVDARVFVGEPGAEHRETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAI--VNIHPAAAIT 133 (429)
T ss_pred CEEeccEEecccccCCCCchhhhhHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCc--ccEEEEeEEe
Confidence 4799999999999998 777889997754 9999999999999999999988888887765444 8999998873
Q ss_pred eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093 76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D--- 145 (346)
Q Consensus 76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~--- 145 (346)
.+ .+.+.+++.+|.+.| +++||.+ +.++.|. ..++++|++++++|+++++||||.+++. +
T Consensus 134 ~~~~~~~l~e~~~l~~~G-v~~f~~~--------~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~~ 203 (429)
T PRK09059 134 KGLAGEEMTEFGLLRAAG-AVAFTDG--------RRSVANT-QVMRRALTYARDFDAVIVHETRDPDLGGNGVMNEGLFA 203 (429)
T ss_pred cCCCCcchHHHHHHHhcC-cEEEecC--------CcccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCCcHHH
Confidence 21 123467888888888 6777622 2334465 6799999999999999999999998742 1
Q ss_pred --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
+..+|..+++|++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+|+++++.. +++
T Consensus 204 ~~~~~~~rP~~aE~~av~r~~--~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~--~~~ 279 (429)
T PRK09059 204 SWLGLSGIPREAEVIPLERDL--RLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE--YRT 279 (429)
T ss_pred HHcCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc--cCC
Confidence 2458999999999 8999999999999999999999999987 7899999999999999999864 568
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAF 292 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~ 292 (346)
.+|||||||+++||++||++|++|+||+ |+|||+||+.++|..+|+ .+|++|+|+++|++++...+ ..++++++++
T Consensus 280 ~~kvnPPLR~~~d~~~L~~~l~~g~id~-i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~~~v~~~~l~l~~~~~~ 358 (429)
T PRK09059 280 FFKLSPPLRTEDDRVAMVEAVASGTIDI-IVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAALRLYHNGEVPLLRLIEA 358 (429)
T ss_pred ccEEcCCCCCHHHHHHHHHHHHcCCCcE-EEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 9999999999999999999999999999 999999999999976665 35999999999999875444 3589999999
Q ss_pred HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
+|.||||+|||+.+ +||||||| ++|+|+++.++|+++|||| +|++++|||++
T Consensus 359 ~s~nPA~~~gl~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sPf-~G~~l~G~v~~ 418 (429)
T PRK09059 359 LSTRPAEIFGLPAGTLKPGAPADIIVIDLDEPWVVDPEDLKSRSKNTPF-EEARFQGRVVR 418 (429)
T ss_pred HhHHHHHHhCCCcCcccCCCcCCEEEECCCCCEEECcccCccCCCCCCC-CCCEEeeEEEE
Confidence 99999999999642 89999999 9999999999999999999 79999999975
No 6
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=6.7e-74 Score=549.75 Aligned_cols=323 Identities=60% Similarity=0.968 Sum_probs=271.6
Q ss_pred EecCccccceecCCCccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEEEEeC
Q 019093 4 TLTQPDDWHLHLRDGDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMTLYLT 77 (346)
Q Consensus 4 vlPG~ID~HvH~r~g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~~~ 77 (346)
-+||+||+|||+|++ |++.+++ || ||+++|||+.|+.++.+.++.++.++.+.+ . +||.+++++..+
T Consensus 2 ~~Pg~iD~h~h~~~~----~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~ 74 (335)
T cd01294 2 TIPRPDDMHLHLRDG----AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPG--PNFTPLMTLYLT 74 (335)
T ss_pred cCCCcceeEecCCCc----hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCC--CcEEEEEEEecc
Confidence 589999999999974 7777654 99 999999999999988887888877776544 3 688887776434
Q ss_pred CCCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH
Q 019093 78 DTTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT 156 (346)
Q Consensus 78 ~~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~ 156 (346)
++...+||.++.+. | ++|||+||.+....++.++.|+ ..++++|++++++|++|++||||..+.......|.+.+.+
T Consensus 75 ~~~~~~el~~~~~~~G-~~g~Klf~~~~~~~~~~~~~d~-~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~~~~~~ 152 (335)
T cd01294 75 ENTTPEELREAKKKGG-IRGVKLYPAGATTNSQGGVTDL-EKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREAKFIPV 152 (335)
T ss_pred CCCCHHHHHHHHHhCC-ceEEEEecCCCccCCCCCcCCH-HHHHHHHHHHHHcCCeEEEecCCCcccccchhhHHHHHHH
Confidence 44357899999876 8 8999999853222223345555 7999999999999999999999987643344566667777
Q ss_pred HHHHHHHh-CCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHH
Q 019093 157 ILQPLIQR-LPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSA 235 (346)
Q Consensus 157 ~l~~~la~-~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~a 235 (346)
++ .+|+ ++|+|+||+|+||++++++|+++|. +||||||||||+||++++...++|+++|||||||+++||++||++
T Consensus 153 ~~--~lA~~~p~~~v~i~Hvst~~~~~~i~~ak~-~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~ 229 (335)
T cd01294 153 LE--PLAQRFPKLKIVLEHITTADAVEYVKSCNE-NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKA 229 (335)
T ss_pred HH--HHHHHcCCCeEEEecccHHHHHHHHHhCCC-CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHH
Confidence 77 6777 5799999999999999999999986 899999999999999998642246899999999999999999999
Q ss_pred HHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEe
Q 019093 236 VTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTK 314 (346)
Q Consensus 236 l~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d 314 (346)
|++|+|| + |+||||||+.++|..+++.+|++++|+++|+++++.++++++++++++||+||||+|||+.++++|+++|
T Consensus 230 l~~G~id~~-i~SDHaP~~~~~K~~~~g~~Gi~~~~~~l~~~~~~~~~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 230 ATSGHPKFF-LGSDSAPHPKSNKESSCGCAGIFSAPIALPYLAEVFEEHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHcCCCCeE-EECCCCCCCCccccCCCCCccccCHHHHHHHHHHHHhccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 9999999 8 8999999999999877777899999999999987666667999999999999999999943369999999
Q ss_pred cceeecCCccccCCcccccCCCcEE
Q 019093 315 IPWKVPEAFSFSFGDIIPMFAGNTL 339 (346)
Q Consensus 315 ~~~~v~~~~~~s~~~~sp~~~G~~l 339 (346)
++|+|++++++|+++||||..|.++
T Consensus 309 ~~~~v~~~~~~s~~~~sp~~g~~~~ 333 (335)
T cd01294 309 EPWKVPEKIPFGNNGVVPFRAGETL 333 (335)
T ss_pred eceEcCchhccCCCceecccCCccC
Confidence 9999999999999999999433444
No 7
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=4.5e-74 Score=555.29 Aligned_cols=323 Identities=20% Similarity=0.244 Sum_probs=281.9
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|||+|+ |.+++|||.|++ ||||||++|||+.|++++.+.++.+.+++++.+. |||++|+++
T Consensus 2 ~~vlPG~iD~HvH~r~pg~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~--vd~~~~~~~- 78 (361)
T cd01318 2 LLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSV--VDYGLYFGV- 78 (361)
T ss_pred CEEecCeeEeeecCCCCCCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCce--eEEEEEEee-
Confidence 5899999999999999 899999999975 9999999999999999999999998888766544 999999886
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------- 144 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------- 144 (346)
+++ +++.++.+.| +.|||+|+++.. .... .++ ..|+++|++++ +++++||||+++..
T Consensus 79 -~~~---~~l~~~~~~~-~~g~k~f~~~~~--~~~~-~~~-~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~ 146 (361)
T cd01318 79 -TGS---EDLEELDKAP-PAGYKIFMGDST--GDLL-DDE-ETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESA 146 (361)
T ss_pred -cCh---hhHHHHHHhh-CcEEEEEEecCC--CCcC-CCH-HHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccC
Confidence 442 4577777778 789999985311 1122 355 89999999985 78999999987631
Q ss_pred ----ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEe
Q 019093 145 ----DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCL 220 (346)
Q Consensus 145 ----~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~ 220 (346)
.+..+|..+++|++ .+|+.+|+|+||+|+||++++++|+++| .+||||||||||+|+++++.+ +|+++||+
T Consensus 147 ~~~~~P~~aE~~av~r~~--~la~~~~~~~hi~Hvs~~~~~~~i~~~k-~~vt~ev~ph~L~l~~~~~~~--~~~~~k~~ 221 (361)
T cd01318 147 HPRIRDAEAAAVATARAL--KLARRHGARLHICHVSTPEELKLIKKAK-PGVTVEVTPHHLFLDVEDYDR--LGTLGKVN 221 (361)
T ss_pred CCCcCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHhC-CCeEEEeCHHHhhcCHHHHhc--CCCeEEEe
Confidence 12468999999999 8999999999999999999999999998 789999999999999999863 56899999
Q ss_pred CCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhh
Q 019093 221 PVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNG 297 (346)
Q Consensus 221 PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nP 297 (346)
||||+++||++||++|++|+||+ |+|||+||+.++|..+|. .+|++|+|+++|++++...+. .+++++++++|.||
T Consensus 222 PPlr~~~d~~aL~~~l~~G~id~-i~SDh~P~~~~~k~~~~~~a~~G~~g~e~~l~~~~~~v~~~~l~l~~a~~~~t~nP 300 (361)
T cd01318 222 PPLRSREDRKALLQALADGRIDV-IASDHAPHTLEEKRKGYPAAPSGIPGVETALPLMLTLVNKGILSLSRVVRLTSHNP 300 (361)
T ss_pred CCCCCHHHHHHHHHHHhCCCCCE-EeeCCCCCCHHHccCChhhCCCCCccHHHHHHHHHHHHHcCCCCHHHHHHHHhHHH
Confidence 99999999999999999999999 999999999999987654 359999999999998765543 59999999999999
Q ss_pred hhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 298 PDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 298 Aki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
||+||++. + +|||+||| .+|+|++++++|+++|||| +|++++|||+++
T Consensus 301 A~~lgl~~~G~i~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~tp~-~G~~l~G~v~~t 357 (361)
T cd01318 301 ARIFGIKNKGRIAEGYDADLTVVDLKEERTIRAEEFHSKAGWTPF-EGFEVTGFPVMT 357 (361)
T ss_pred HHHhCCCCCCccCCCCcCCEEEEeCCCCEEECHHHccccCCCCCC-CCCEEeeEEEEE
Confidence 99999964 2 89999999 9999999999999999999 799999999863
No 8
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=100.00 E-value=3.3e-72 Score=537.46 Aligned_cols=338 Identities=58% Similarity=0.972 Sum_probs=281.6
Q ss_pred eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS 81 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~ 81 (346)
++.+|-.-|+|+|+|++.+-+-......-|||++++|||+.|+.++.+.++.+.+++++.+...+||.+|+++..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v~~~~~~~ 80 (341)
T TIGR00856 1 ELTIRRPDDWHLHLRDGAMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTLYLTDSLT 80 (341)
T ss_pred CceecCccceeeeccCchHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEEECCCCCC
Confidence 36789999999999996555554444445599999999999999999999999888877653126999999985433335
Q ss_pred HHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 82 PDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 82 ~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
.+||.++.++ | +.|||+||++....++.++.|+ +.++++|++++++|+++++||||..........|..++.+.+.
T Consensus 81 ~~Ei~~l~~~~G-v~g~Klf~~~~~~~~~~~v~dd-~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~e~~a~~~~i~- 157 (341)
T TIGR00856 81 PEELERAKNEGV-VRAVKLYPAGATTNSSHGVTDI-DAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDREARFIESVLE- 157 (341)
T ss_pred HHHHHHHHHcCC-eEEEEEccCCcccCCCcCCCCH-HHHHHHHHHHHHcCCeEEEeecCCCCCcccccchhhhhHHHHH-
Confidence 7899999877 8 8999999864322234556676 7999999999999999999999973111223346666665553
Q ss_pred HHH-hCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093 161 LIQ-RLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 239 (346)
Q Consensus 161 ~la-~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G 239 (346)
.+| +++|+|+||+|+||++++++|+++|+ +||||||||||+||++++...++|+.+|||||||+++||++||++|++|
T Consensus 158 ~lA~~~~~~~~~i~H~st~~~~~~i~~a~~-~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G 236 (341)
T TIGR00856 158 PLRQRFPALKVVLEHITTKDAIDYVEDGNN-RLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASG 236 (341)
T ss_pred HHHHHccCCeEEEEecCcHHHHHHHHHcCC-CEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence 344 68899999999999999999999985 5999999999999999986422568999999999999999999999999
Q ss_pred Ccc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093 240 SRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK 318 (346)
Q Consensus 240 ~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~ 318 (346)
+|| + |+||||||+.++|..+...+|++|+|+++|++++++.+.++++++++++|+||||+|||++|||||+|||++|+
T Consensus 237 ~id~~-i~SDHaP~~~~~K~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~v~~~s~nPAk~~gl~~~dAdi~~~~~~~~ 315 (341)
T TIGR00856 237 FPKFF-LGTDSAPHARHRKESSCGCAGCFSAPTALPSYAEVFEEMNALENLEAFCSDNGPQFYGLPVNSTKIELVKKEQQ 315 (341)
T ss_pred CCCEE-EeCCCCCCChhHcCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHhHhHHHHhCCCCCCceEEEEeccEE
Confidence 999 8 99999999999997543346999999999999877655569999999999999999999767999999999999
Q ss_pred ecCCccccCCcccccCCCcEEEEEEE
Q 019093 319 VPEAFSFSFGDIIPMFAGNTLEWQPS 344 (346)
Q Consensus 319 v~~~~~~s~~~~sp~~~G~~l~G~v~ 344 (346)
|+++.++|+++||||..|++++|+|.
T Consensus 316 i~~~~~~s~~~~sp~~~~~~~~~~v~ 341 (341)
T TIGR00856 316 IPESIALTDDTLVPFRAGETLSWSVK 341 (341)
T ss_pred eCchhccCCCCcccccCCcccceeeC
Confidence 99999999999999977999999984
No 9
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=2.1e-73 Score=557.28 Aligned_cols=306 Identities=20% Similarity=0.255 Sum_probs=257.9
Q ss_pred EEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093 3 LTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL 76 (346)
Q Consensus 3 ~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~ 76 (346)
+||||+||+|||+|+ |++++|||.|+| ||||||++||||.|++++.+.++.+++++++.+. |||++|+++
T Consensus 43 ~vlPG~ID~HvH~r~pg~~~ked~~s~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~--vd~~~~~~~-- 118 (409)
T PRK01211 43 AILPAATDIHVHFRTPGETEKEDFSTGTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAY--VDFSLYSME-- 118 (409)
T ss_pred EEcCCeEEeeeccCCCCCcccCcHHHHHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCce--eeEEEEecc--
Confidence 699999999999999 999999999975 9999999999999999999999999888766554 999999875
Q ss_pred CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-----------
Q 019093 77 TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----------- 145 (346)
Q Consensus 77 ~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~----------- 145 (346)
+++ + .++ .+.| +.|||+||++.....+. ....+.|++++++|+++++||||++++..
T Consensus 119 ~~~-~-~~~---~~~g-~~~~k~f~~~~~~~~~~------~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~ 186 (409)
T PRK01211 119 TGN-N-ALI---LDER-SIGLKVYMGGTTNTNGT------DIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDH 186 (409)
T ss_pred CCc-h-hhH---Hhcc-CcEEEEEcCCCcCCCcc------ccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhC
Confidence 432 2 233 3347 78999998642111111 12234667888999999999999887421
Q ss_pred ----hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093 146 ----IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP 221 (346)
Q Consensus 146 ----~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P 221 (346)
+..+|.+++.+++ .++++ ++||+|+||++++ .+||||||||||+||+++ . +++.+||||
T Consensus 187 ~~~rP~~aE~~ai~~~~--~la~~---~~hi~HvSt~~~~--------~~vt~Ev~phhL~l~~~~-~---~~~~~kvnP 249 (409)
T PRK01211 187 DLARPIECEIKAVKYVK--NLDLK---TKIIAHVSSIDVI--------GRFLREVTPHHLLLNDDM-P---LGSYGKVNP 249 (409)
T ss_pred CCCCCHHHHHHHHHHHH--HHhCC---CcEEEEecChhhc--------CceEEEecHHHHcccccc-c---cCCceeEcC
Confidence 2468999999999 78887 6999999999998 279999999999999987 2 468999999
Q ss_pred CCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhh
Q 019093 222 VLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGP 298 (346)
Q Consensus 222 PLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPA 298 (346)
|||+++||++||++|++|+||+ |+||||||+.++|. +|. .+|++|+|++||+||+...++ ++++++++++|.|||
T Consensus 250 PLRs~~d~~aL~~~l~dG~ID~-i~SDHaP~~~~eK~-~~~~a~~G~~gle~~lpl~~~~v~~~~isl~~~v~~~s~nPA 327 (409)
T PRK01211 250 PLRDRWTQERLLEEYISGRFDI-LSSDHAPHTEEDKQ-EFEYAKSGIIGVETRVPLFLALVKKKILPLDVLYKTAIERPA 327 (409)
T ss_pred CCCCHHHHHHHHHHHhCCCCCE-EeCCCCCCChhHhC-CHhhCCCCCCcHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999 99999999999983 444 469999999999999754443 589999999999999
Q ss_pred hhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 299 DFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 299 ki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
|+|||+++ +||||||| ++|+|+.+.++|+++|||| +|++++ +|.+
T Consensus 328 ki~gl~kG~l~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~spf-~G~~~~-~v~~ 380 (409)
T PRK01211 328 SLFGIKKGKIEEGYDADFMAFDFTNIKKINDKRLHSKCPVSPF-NGFDAI-FPSH 380 (409)
T ss_pred HHhCCCCCcccCCCcCCEEEEcCCCeEEEChHHhhccCCCCCC-CCCEec-cEEE
Confidence 99999532 89999999 8999999999999999999 799987 7765
No 10
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=5.2e-72 Score=551.54 Aligned_cols=326 Identities=17% Similarity=0.151 Sum_probs=280.0
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|||+|+ |..++|++++++ ||||||++|||+.|+.++.+.++.+.++.+..+. +++.+++.+.
T Consensus 51 ~~vlPG~iD~H~H~~~~g~~~~e~~~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 128 (425)
T PRK07627 51 LIVCPGLVDLSARLREPGYEYKATLESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQ--AHVYPLGALT 128 (425)
T ss_pred CEEeccEEeccccccCCCccccCcHHHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCc--eeEEEeCeEE
Confidence 4899999999999999 888899998864 9999999999999999988877776665544333 7766665542
Q ss_pred eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093 76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D--- 145 (346)
Q Consensus 76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~--- 145 (346)
.. .+.+.+++.+|.+.| +++||.|. ....++ ..++++|++++++|+++++||||..+.. +
T Consensus 129 ~g~~~~~~~~i~~l~~~G-~~~fk~~~--------~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~~g~~~ 198 (425)
T PRK07627 129 VGLKGEVLTEMVELTEAG-CVGFSQAN--------VPVVDT-QVLLRALQYASTFGFTVWLRPLDAFLGRGGVAASGAVA 198 (425)
T ss_pred cCCCccCHHHHHHHHhCC-EEEEEcCC--------cccCCH-HHHHHHHHHHHhcCCEEEEecCChhhhhCCCcCCCHhH
Confidence 21 123578899998889 78999652 112344 7899999999999999999999987642 1
Q ss_pred --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
+..+|..++.|++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+|+++++.. +++
T Consensus 199 ~~~~~~~~P~~aE~~av~r~~--~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~--~~~ 274 (425)
T PRK07627 199 SRLGLSGVPVAAETIALHTIF--ELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY--FDS 274 (425)
T ss_pred HHcCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc--cCC
Confidence 2458999999999 8999999999999999999999999988 7899999999999999999864 468
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAF 292 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~ 292 (346)
.+|||||||+++||++||++|++|+||+ |+||||||+.++|..+|. .+|++|+|+.+|++++.+.+. .++++++++
T Consensus 275 ~~k~~PPLR~~~d~~~L~~~l~~G~id~-i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~~~~~~i~~~~~l~~ 353 (425)
T PRK07627 275 QFRLDPPLRSQRDREAIRAALADGTIDA-ICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKWADEAKVPLARALAR 353 (425)
T ss_pred ceEEeCCCCCHHHHHHHHHHHhcCCCcE-EEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999999999999999999999999999 999999999999976665 359999999999988765553 589999999
Q ss_pred HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
+|.|||++||++.+ +|||++|| .+|+++.++++|+++|||| +|++++|+|.+
T Consensus 354 ~t~~pA~~lg~~~G~l~~G~~ADlvv~d~~~~~~v~~~~~~s~~~~sp~-~g~~~~g~v~~ 413 (425)
T PRK07627 354 ITSAPARVLGLPAGRLAEGAPADLCVFDPDAHWRVEPRALKSQGKNTPF-LGYELPGRVRA 413 (425)
T ss_pred HHHHHHHHhCCCCCcccCCCcCCEEEECCCCcEEEChhhccccCCCCCC-cCCEeeeEEEE
Confidence 99999999998432 89999999 6899999999999999999 79999999975
No 11
>PRK05451 dihydroorotase; Provisional
Probab=100.00 E-value=3.4e-71 Score=532.17 Aligned_cols=338 Identities=64% Similarity=1.063 Sum_probs=279.3
Q ss_pred eEEecCccccceecCCCccccccccccC-CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV-SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT 80 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s-GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~ 80 (346)
++.+|-.||+|||+|++.++| ++.+++ .++|++++|||+.|+.++.+.++.+.+++++.+...+||.+++++....+.
T Consensus 4 ~~~~~~~~d~h~hl~~~~~~~-~~~~~~~~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i~~~~~~ 82 (345)
T PRK05451 4 TLTIRRPDDWHLHLRDGAMLK-AVVPYTARQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTLYLTDNT 82 (345)
T ss_pred eEEecCcceEEEecCCchHHH-HHHHHHHHhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEEEeCCCC
Confidence 468899999999999986677 887776 689999999999999999999999988887654333799988887443323
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
..+||.++.+.|++.|||+||++.....+.++.|+ ..++++|++++++|+++++||||.++.......|..++.+.+.
T Consensus 83 ~~~El~~~~~~Gvv~g~Kl~~~~~~~~~~~~~~dd-~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~e~~~~~~~l~- 160 (345)
T PRK05451 83 DPDELERAKASGVVTAAKLYPAGATTNSDAGVTDI-EKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDREAVFIDRVLE- 160 (345)
T ss_pred CHHHHHHHHHCCCEEEEEEecccCccCCccCcCCH-HHHHHHHHHHHHcCCEEEEecCCCCcccccccchHHHHHHHHH-
Confidence 47899999888955699999975221222334455 7999999999999999999999966522233446666766653
Q ss_pred HHH-hCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093 161 LIQ-RLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 239 (346)
Q Consensus 161 ~la-~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G 239 (346)
.+| +++|+|+||+|+||++++++|++++ .+||||||||||+||++++...++++.+|||||||+++||++||++|++|
T Consensus 161 ~lA~~~pg~~lhI~Hlst~~~~e~i~~a~-~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G 239 (345)
T PRK05451 161 PLRRRFPKLKIVFEHITTKDAVDYVREAN-DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSG 239 (345)
T ss_pred HHHHhcCCCcEEEEecCcHHHHHHHHhcC-CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcC
Confidence 477 5669999999999999999999884 79999999999999999986434568899999999999999999999999
Q ss_pred Ccc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093 240 SRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK 318 (346)
Q Consensus 240 ~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~ 318 (346)
+|| + |+||||||+.++|+.+++.+|+.+++..+|+++..++++++|+++++++|+||||+|||+.+++.|++.|++|+
T Consensus 240 ~Id~~-i~SDHaP~~~~~K~~~~G~~gi~~~~~g~~~~~~~~~~~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~~~~~~ 318 (345)
T PRK05451 240 NPKFF-LGTDSAPHARHAKESACGCAGIFSAPAALELYAEVFEEAGALDKLEAFASLNGPDFYGLPRNTDTITLVREPWT 318 (345)
T ss_pred CCCEE-EeCCCCCCChHHhCCCCCCCchhhHHHHHHHHHHHHHcCCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEeccee
Confidence 999 8 99999999999997544445555555588888877666679999999999999999999433589999999999
Q ss_pred ecCCccccCCcccccCCCcEEEEEEE
Q 019093 319 VPEAFSFSFGDIIPMFAGNTLEWQPS 344 (346)
Q Consensus 319 v~~~~~~s~~~~sp~~~G~~l~G~v~ 344 (346)
|+++.++|+++||||.+|.+|+|+|.
T Consensus 319 v~~~~~~s~~~~sp~~~~~~~~~~~~ 344 (345)
T PRK05451 319 VPESIPFGDETVVPFRAGETLRWSVK 344 (345)
T ss_pred cCcccccCCCceeeecCCceeeeEec
Confidence 99999999999999966999999985
No 12
>PLN02599 dihydroorotase
Probab=100.00 E-value=2e-70 Score=526.80 Aligned_cols=339 Identities=78% Similarity=1.245 Sum_probs=291.1
Q ss_pred eEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS 81 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~ 81 (346)
++.||-..|+|||+|+|.+-+......+||+|++++|||+.|++++.+.++.+++++++.+...+||.+|++++++++..
T Consensus 22 ~~~~~~~~d~h~hlr~~~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l~lt~~~~ 101 (364)
T PLN02599 22 ELTITRPDDWHLHLRDGAKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMTLYLTDNTT 101 (364)
T ss_pred eEEecCCcceeeEccCcHHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEEecCCCCC
Confidence 57899999999999998777777777789999999999999999999999999999877522238999999987665445
Q ss_pred HHHHHHHHHcCCee-EEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 82 PDEIKLARKTGVVF-AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 82 ~~el~~l~~~G~v~-~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
.+||.++.+.| |+ |||+||.+.+++++.++.|+ +.++++|++++++|+++++||||.+...+....|...+.|++..
T Consensus 102 l~Ei~~~~~~G-vv~gfKlyp~~~tt~s~~gv~d~-~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~E~~~i~r~l~~ 179 (364)
T PLN02599 102 PEEIKAAKASG-VVFAVKLYPAGATTNSQAGVTDL-GKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDREKVFIDTILAP 179 (364)
T ss_pred HHHHHHHHHCC-CcEEEEECcccCcCCCccccCCH-HHHHHHHHHHHhcCCEEEEecCCCcccccccccHHHHHHHHHHH
Confidence 78999998889 66 99999976444555667776 89999999999999999999999775444455677777788755
Q ss_pred HHHhCCCCcEEEEccCCHHHHHHHHccC-CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC
Q 019093 161 LIQRLPQLKVVMEHITTMDAVKFVESCK-EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG 239 (346)
Q Consensus 161 ~la~~~g~~lhi~HvSt~~~l~~i~~ak-g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G 239 (346)
.+++++|+|+||+|+||++++++|+++| + +|+||||||||+||++++...++++.+|||||||+++||++||++|.+|
T Consensus 180 ~la~~~g~kI~i~HiSt~~~ve~v~~ak~~-~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G 258 (364)
T PLN02599 180 LVQKLPQLKIVMEHITTMDAVEFVESCGDG-NVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSG 258 (364)
T ss_pred HHHhccCCeEEEEecChHHHHHHHHhccCC-CEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcC
Confidence 6899999999999999999999999998 4 8999999999999999986544678899999999999999999999999
Q ss_pred Cc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEeccee
Q 019093 240 SR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWK 318 (346)
Q Consensus 240 ~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~ 318 (346)
.| |+ |+||||||+.++|+.+++.+|+.++++.+|++++.+++.++|++|++++|.||||+|||+.++..|+|.+++|+
T Consensus 259 ~i~~~-i~SDHaPh~~~~K~~~~g~~Gi~~~~~~l~~l~~~~~~~g~l~~l~~~~S~npA~~~gL~~~kg~i~l~~~~~~ 337 (364)
T PLN02599 259 SKKFF-LGTDSAPHPKRAKEASCGCAGIYSAPVALSLYAKAFEEAGALDKLEAFTSFNGPDFYGLPRNTSTITLVKSAWK 337 (364)
T ss_pred CCCEE-EecCCCCCChHHhcCCCCCCCcccHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHhCCCCCCCeEEEEECCcc
Confidence 96 88 99999999999998767777888888899998888777679999999999999999999744589999999999
Q ss_pred ecCCccccCCcccccCCCcEEEEEEE
Q 019093 319 VPEAFSFSFGDIIPMFAGNTLEWQPS 344 (346)
Q Consensus 319 v~~~~~~s~~~~sp~~~G~~l~G~v~ 344 (346)
|.+.-..+.....||..|.+|.|+|+
T Consensus 338 ~~~~~~~~~~~~~p~~~~~~~~w~~~ 363 (364)
T PLN02599 338 VPEAYSFGGGTVVPMFAGETIPWSVV 363 (364)
T ss_pred CCCEeecCCCeEeeecCCCeeeeeec
Confidence 98654323333789989999999986
No 13
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=2.7e-71 Score=540.95 Aligned_cols=315 Identities=16% Similarity=0.160 Sum_probs=267.8
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|||+|+ +.+ +|+|+|++ ||||||++|||+.|++++.+.++.+.+++++.....+||. .+.
T Consensus 26 ~~vlPG~ID~HvH~~~~~~~-~e~~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 101 (386)
T PRK08417 26 KTLLPALVDLNVSLKNDSLS-SKNLKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELPMQIFPSI---RAL 101 (386)
T ss_pred CEEccCeeEEeeeeCCCCcC-hhhHHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccCCcEEEEE---EEE
Confidence 5899999999999998 655 58998875 9999999999999999999988888776654211115553 231
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C----
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D---- 145 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~---- 145 (346)
..+.+.+++.++.+.| +.+||+|. .. +. ..++++|+++++.|+++++||||.+++. +
T Consensus 102 -~~~~~~~~i~~l~~~G-v~~~k~~~---------~~-~~-~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~ 168 (386)
T PRK08417 102 -DEDGKLSNIATLLKKG-AKALELSS---------DL-DA-NLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSF 168 (386)
T ss_pred -CCCccHHHHHHHHHCC-CEEEECCC---------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhH
Confidence 2333577899998889 77988652 12 34 7899999999999999999999987632 1
Q ss_pred -------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCCc
Q 019093 146 -------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRPH 216 (346)
Q Consensus 146 -------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~~ 216 (346)
+..+|..++.|++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.. +++.
T Consensus 169 ~~~~~~rp~~aE~~~v~~~~--~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~--~~~~ 244 (386)
T PRK08417 169 ELGLPGIPSIAETKEVAKMK--ELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACEN--FNTA 244 (386)
T ss_pred HhCCCCCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcC--cCcc
Confidence 2468999999999 8999999999999999999999999887 7899999999999999999854 5689
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHHH
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEAF 292 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~~ 292 (346)
+|||||||+++||++||++|++|+||+ |+||||||+.++|..+|+ .+|++|+|+++|++|+.++++ .++++++++
T Consensus 245 ~k~~PPlR~~~d~~~L~~~l~~g~Id~-i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~ 323 (386)
T PRK08417 245 AKLNPPLRSKEDRLALLEALKEGKIDF-LTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTYLVKEGIITWSELSRF 323 (386)
T ss_pred cEECCCCCCHHHHHHHHHHHhcCCceE-EEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 999999999999999999999999999 999999999999976654 469999999999999876654 489999999
Q ss_pred HchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 293 TSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 293 ~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+|.||||+||++.+ +|||++|| .+|+++. +|+|| +|++++|+|.++
T Consensus 324 ~t~~pA~~lgl~~G~l~~G~~ADlvi~d~~~~~~~~~-------~~~p~-~g~~~~g~v~~t 377 (386)
T PRK08417 324 TSYNPAQFLGLNSGEIEVGKEADLVLFDPNESTIIDD-------NFSLY-SGDELYGKIEAV 377 (386)
T ss_pred HHHHHHHHhCCCCCccCCCCcCCEEEEcCCCCeEeCC-------CCCCc-cCCEEeccEEEE
Confidence 99999999999533 89999999 7899874 69999 799999998753
No 14
>PLN02795 allantoinase
Probab=100.00 E-value=7.1e-71 Score=553.68 Aligned_cols=331 Identities=18% Similarity=0.207 Sum_probs=280.1
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|+|+++ +..++|++.+++ |||||++||| |+.|+.++.+.++.+.+.++..+. +||+++.++
T Consensus 95 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~--vd~~~~~~~ 172 (505)
T PLN02795 95 AVVMPGLIDVHVHLNEPGRTEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLY--VDVGFWGGL 172 (505)
T ss_pred CEEecCEEecccCcCCCCccchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCce--eeeeceecc
Confidence 4799999999999998 777888888764 9999999999 578888888888877766544333 899888765
Q ss_pred EeCCC--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC--------
Q 019093 75 YLTDT--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------- 144 (346)
Q Consensus 75 ~~~~~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-------- 144 (346)
.++ .+.+++.++.+.| +++||+||+.+..+ .....++ ..++++|++++++|+++++||||.+++.
T Consensus 173 --~~~~~~~~~~l~~~~~~G-~~g~k~f~~~~~~~-~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~~~ 247 (505)
T PLN02795 173 --VPENAHNASVLEELLDAG-ALGLKSFMCPSGIN-DFPMTTA-THIKAALPVLAKYGRPLLVHAEVVSPVESDSRLDAD 247 (505)
T ss_pred --cCcchhHHHHHHHHHHCC-CcEEEEEecccCCC-CcccCCH-HHHHHHHHHHHHhCCEEEEecCChhHhhhhhhhhcC
Confidence 322 1355677777788 78999998643211 2223355 7899999999999999999999988531
Q ss_pred --C--------hhhhHHHHHHHHHHHHHHhCC-------CCcEEEEccCCH-HHHHHHHccC--CCeeEEEccchhhccc
Q 019093 145 --D--------IFDREKVFIDTILQPLIQRLP-------QLKVVMEHITTM-DAVKFVESCK--EGFVAATVTPQHLVLN 204 (346)
Q Consensus 145 --~--------~~~~E~~av~~~l~~~la~~~-------g~~lhi~HvSt~-~~l~~i~~ak--g~~vt~Et~ph~L~l~ 204 (346)
+ +..+|.+++.+++ .+++.+ |+|+||+|+||+ +++++|+++| |.+||||||||||+||
T Consensus 248 ~~~~~~~~~~rP~~aE~~ai~~~~--~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~ 325 (505)
T PLN02795 248 PRSYSTYLKSRPPSWEQEAIRQLL--EVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFS 325 (505)
T ss_pred CcChhHhcccCCHHHHHHHHHHHH--HHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhccc
Confidence 1 2357999999999 899999 999999999999 9999999988 7899999999999999
Q ss_pred hhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccC---CC--CCCccchhHHHHHHHHH
Q 019093 205 RNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA---CG--CAGIYNAPVALSLYAKV 279 (346)
Q Consensus 205 ~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~---~~--~~G~~g~e~~lp~l~~~ 279 (346)
++++.. +++++|||||||+++||++||++|++|+||+ |+||||||+.++|..+ |+ .+|++|+|++||++|+.
T Consensus 326 ~~~~~~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~-i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~ 402 (505)
T PLN02795 326 AEEIPD--GDTRYKCAPPIRDAANRELLWKALLDGDIDM-LSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTA 402 (505)
T ss_pred HHHccC--CCCceEEcCCCCChHHHHHHHHHHhCCCceE-EecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHH
Confidence 999864 4689999999999999999999999999999 9999999999999643 43 36999999999999976
Q ss_pred HHhc-CCHHHHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCc-cccCCc-ccccCCCcEEEEEEEE
Q 019093 280 FEEM-GALDKLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAF-SFSFGD-IIPMFAGNTLEWQPSL 345 (346)
Q Consensus 280 ~~~~-~~l~~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~-~~s~~~-~sp~~~G~~l~G~v~~ 345 (346)
++++ .+++++++++|.||||+|||+++ +|||+||| ++|+|+++. ++|+++ |||| +|++++|+|++
T Consensus 403 ~~~~~l~l~~~v~~~s~~pA~~~gl~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~~s~~~~~sp~-~G~~l~g~v~~ 479 (505)
T PLN02795 403 GRAYGLTLEQLARWWSERPAKLAGLDSKGAIAPGKDADIVVWDPEAEFVLDESYPIYHKHKSLSPY-LGTKLSGKVIA 479 (505)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEEcCCcceEECcchhhhhcCCCcCCC-CCeEEEeEEEE
Confidence 6665 49999999999999999999542 89999999 899999885 789997 9999 79999999976
No 15
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=2e-70 Score=544.25 Aligned_cols=332 Identities=16% Similarity=0.148 Sum_probs=287.4
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
.+|+||+||+|+|++. +..++|++.+++ ||+||+++|| |+.|+.++.+.++.+.+++++.+. |||.+++++
T Consensus 49 ~~v~Pg~iD~h~h~~~~~~~~~e~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~--vd~~~~~~~ 126 (449)
T PRK08044 49 LVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLT--IDAAQLGGL 126 (449)
T ss_pred CEEcCCeeccccccCCCCccccccHHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCe--eeEEEEeee
Confidence 3789999999999998 766789998864 9999999999 788999999999988887765554 999998886
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccC---CCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-------
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTN---SQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------- 144 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~---~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------- 144 (346)
+.+ +..++.+|.+.| +++||+||.+.... .+....++ ..++++|++++++|.++++||||.+++.
T Consensus 127 --~~~-~~~ei~~l~~~g-v~~fk~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~ 201 (449)
T PRK08044 127 --VSY-NLDRLHELDEVG-VVGFKCFVATCGDRGIDNDFRDVND-WQFYKGAQKLGELGQPVLVHCENALICDELGEEAK 201 (449)
T ss_pred --CCC-CHHHHHHHHHcC-ceEEEEEecccCcccccCCccCcCH-HHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHH
Confidence 543 688999998889 78999998652111 11122244 7899999999999999999999988621
Q ss_pred --C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhc
Q 019093 145 --D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALF 209 (346)
Q Consensus 145 --~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~ 209 (346)
+ +..+|.+++.+++ .+|+.+|+|+||+|+|+++++++++++| |.++|||||||||+|+++++.
T Consensus 202 ~~G~~~~~~~~~~~P~~~E~~~v~r~~--~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~ 279 (449)
T PRK08044 202 REGRVTAHDYVASRPVFTEVEAIRRVL--YLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFE 279 (449)
T ss_pred hcCCCChhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhh
Confidence 1 2458999999999 8999999999999999999999999887 789999999999999999986
Q ss_pred cCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CC
Q 019093 210 QGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GA 285 (346)
Q Consensus 210 ~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~ 285 (346)
. +|+.+|||||||+++||++||++|++|+||+ |+|||+||+.++|..++. .+|++|+|+.||++++.++++ .+
T Consensus 280 ~--~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~-i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~ 356 (449)
T PRK08044 280 E--IGTLAKCSPPIRDLENQKGMWEKLFNGEIDC-LVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMS 356 (449)
T ss_pred C--CCCcEEEcCCCCChHHHHHHHHHHhCCCceE-EEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHHHHHcCCCC
Confidence 4 4689999999999999999999999999999 999999999999976654 359999999999998765543 48
Q ss_pred HHHHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 286 LDKLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 286 l~~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++++++++|.||||+||++++ +|||+||| ++|+|+++.++|+++|||| +|++++|||+++
T Consensus 357 ~~~~v~~~s~npA~~lgl~~~G~i~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~sp~-~G~~l~G~v~~t 425 (449)
T PRK08044 357 LPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLKNEDLEYRHKVSPY-VGRTIGARITKT 425 (449)
T ss_pred HHHHHHHHHHhHHHHhCCCCCCcCCCCCccCEEEECCCCcEEECHHHccccCCCCCC-CCCEEeeeEEEE
Confidence 999999999999999999532 89999999 8999999999999999999 799999999863
No 16
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=2.9e-70 Score=532.49 Aligned_cols=300 Identities=17% Similarity=0.213 Sum_probs=248.8
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++||||+||+|||+|+ |.+++|||+|+| ||||||++||||.|++++.+.++.+++++++.+. |||++|+++
T Consensus 43 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~--vd~~~~~~~- 119 (392)
T PRK00369 43 TLILPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSR--VDYFVYSGV- 119 (392)
T ss_pred CEEeCCEEEcccccCCCCCcccccHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCe--EEEEEEeec-
Confidence 5899999999999999 999999999976 9999999999999999999999999888776554 999999865
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC------hhhh
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD------IFDR 149 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~------~~~~ 149 (346)
++ +.+||.++ | +.|||+|+. + ..+. . +|+.+.+.+.++++||||++++.. ...+
T Consensus 120 -~~--~~~el~~~---~-~~g~k~f~~------~--~~~~-~----~~~~~~~~~~~v~~HaE~~~l~~~~~~~~rp~~a 179 (392)
T PRK00369 120 -TK--DPEKVDKL---P-IAGYKIFPE------D--LERE-E----TFRVLLKSRKLKILHPEVPLALKSNRKLRRNCWY 179 (392)
T ss_pred -cC--CHHHHHHh---h-CceEEEECC------C--CchH-H----HHHHHHHhCCEEEEeCCCHHHhhcchhcccCHHH
Confidence 43 34456554 6 789999952 1 1232 3 333444455899999999886431 2357
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhH
Q 019093 150 EKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHR 229 (346)
Q Consensus 150 E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~ 229 (346)
|.+++.++. .+ +|+||+|+||+++++.+++ +| ||||||||||+||+++ ++.+|||||||+++||
T Consensus 180 E~~ai~~~~--~~-----~~lhi~HvSt~~~v~~ak~-~g--vt~Ev~pHhL~l~~~~------~~~~k~~PPLR~~~dr 243 (392)
T PRK00369 180 EIAALYYVK--DY-----QNVHITHASNPRTVRLAKE-LG--FTVDITPHHLLVNGEK------DCLTKVNPPIRDINER 243 (392)
T ss_pred HHHHHHHHH--Hh-----CCEEEEECCCHHHHHHHHH-CC--CeEEechhHheeccCC------CCceEEeCCCCCHHHH
Confidence 888876666 34 8999999999999886643 33 8999999999999862 3689999999999999
Q ss_pred HHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCC
Q 019093 230 QAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN 306 (346)
Q Consensus 230 ~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~k 306 (346)
++||++|++ ||+ |+||||||+.++|..+|. .+|++|+|+++|++|+...+ ..+++++++++|.|||++|||+.+
T Consensus 244 ~aL~~~l~~--id~-i~SDHaP~~~~~K~~~f~~~~~Gi~GlE~~lpll~~~v~~~~lsl~~~v~~~s~nPA~ilgl~~g 320 (392)
T PRK00369 244 LWLLQALSE--VDA-IASDHAPHSSFEKLQPYEVCPPGIAALSFTPPFIYTLVSKGILSIDRAVELISTNPARILGIPYG 320 (392)
T ss_pred HHHHHHHHh--CCE-EEeCCCCCCHHHccCCHhhCCCCCeeHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999 999 999999999999976665 36999999999999975444 358999999999999999999532
Q ss_pred ------CccEEEEe-cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 307 ------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 307 ------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+|||+||| .+|++ +.++|+++|||| +|++++|+|.++
T Consensus 321 ~i~~G~~ADlvi~d~~~~~~--~~~~sk~~~sp~-~G~~l~G~v~~t 364 (392)
T PRK00369 321 EIKEGYRANFTVIQFEDWRY--STKYSKVIETPL-DGFELKASVYAT 364 (392)
T ss_pred ccCCCCccCEEEEeCCceeE--ccccccCCCCCC-CCCEeeeEEEEE
Confidence 89999999 88987 557999999999 799999999863
No 17
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=1.6e-68 Score=522.41 Aligned_cols=314 Identities=21% Similarity=0.239 Sum_probs=262.4
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|||+++ +..++|++.+++ ||+||+++|||+.|++++.+.++.+.+++++.+. |||++++ +
T Consensus 43 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~--vd~~~~~-~- 118 (398)
T PRK04250 43 GIILPGLIDVHVHLRDFEESYKETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSY--ADYALNF-L- 118 (398)
T ss_pred CEEccCEEeccccccCCCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCce--eeEEEEE-e-
Confidence 4799999999999998 777889998764 9999999999999999999999988887766554 9999987 5
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC----hhhhHH
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD----IFDREK 151 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~----~~~~E~ 151 (346)
+++ +.+++.++.. .++|+||.+ + +..+.. ..+... .++.+.++++||||.++... +..+|.
T Consensus 119 -~~~-~~~~l~~l~~----~~~k~f~~~--~--~~~~~~--~~~~~~---~~~~~~~v~~H~E~~~~~~~~~~~p~~aE~ 183 (398)
T PRK04250 119 -IAG-NCEKAEEIKA----DFYKIFMGA--S--TGGIFS--ENFEVD---YACAPGIVSVHAEDPELIREFPERPPEAEV 183 (398)
T ss_pred -cCC-CHHHHHHHHh----hheEEEEec--C--CCchhH--HHHHHH---HHhcCCeEEEEecChhhhhcccCCCHHHHH
Confidence 443 5667887752 258999853 1 111111 112111 33446789999999887432 356899
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCe-eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH
Q 019093 152 VFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGF-VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ 230 (346)
Q Consensus 152 ~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~-vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~ 230 (346)
+++.|++ .||+.+|+|+||+|+||++++++|+++ |.+ ||||||||||+||++++ . +++.+|||||||+++||+
T Consensus 184 ~av~r~~--~la~~~~~~lhi~HvSt~~~~~~i~~~-g~~~vt~Ev~ph~L~l~~~~~-~--~~~~~k~~PPLR~~~d~~ 257 (398)
T PRK04250 184 VAIERAL--EAGKKLKKPLHICHISTKDGLKLILKS-NLPWVSFEVTPHHLFLTRKDY-E--RNPLLKVYPPLRSEEDRK 257 (398)
T ss_pred HHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHc-CCCcEEEEeCHHHhccCHHHH-C--CCCceEEcCCCCCHHHHH
Confidence 9999999 899999999999999999999999864 776 99999999999999998 3 468999999999999999
Q ss_pred HHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCCC---
Q 019093 231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPRN--- 306 (346)
Q Consensus 231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~k--- 306 (346)
+||++|. .||+ |+||||||+.++|+. +.+|++|+|++||++|+...+ .++++++++++|.||||+|||+.+
T Consensus 258 aL~~~l~--~Id~-i~sDHaP~~~~~k~~--~~~G~~g~e~~lpl~~~~v~~~~lsl~~~v~~~t~npAk~lgl~~~GL~ 332 (398)
T PRK04250 258 ALWENFS--KIPI-IASDHAPHTLEDKEA--GAAGIPGLETEVPLLLDAANKGMISLFDIVEKMHDNPARIFGIKNYGIE 332 (398)
T ss_pred HHHHhhc--cCCE-EEcCCcccCHHHhhc--CCCCcchHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCcCcc
Confidence 9999995 5999 999999999999863 357999999999999975444 359999999999999999999632
Q ss_pred ---CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 307 ---TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 307 ---dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+|||+||| ++|+++.++++|+++|||| +|++++|+|.++
T Consensus 333 ~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~-~g~~l~g~v~~t 376 (398)
T PRK04250 333 EGNYANFAVFDMKKEWTIKAEELYTKAGWTPY-EGFKLKGKVIMT 376 (398)
T ss_pred CCCcCCEEEEcCCCcEEEChhhccccCCCCCC-CCCEEeeEEEEE
Confidence 89999999 8899999999999999999 799999998753
No 18
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=8.7e-68 Score=526.20 Aligned_cols=331 Identities=17% Similarity=0.174 Sum_probs=283.8
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|+|+++ +..++|++.+++ ||+||+++|| |+.|+.++.+.+..+.+.++..+. +||.+++++
T Consensus 50 ~~vlPG~ID~H~H~~~~~~~~~~~~~~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~ 127 (451)
T PRK06189 50 LYVFPGMIDVHVHFNEPGRTHWEGFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSA--VDFALWGGL 127 (451)
T ss_pred CEEecCEEEeeeccCCCCCCCcccHHHHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCce--EeEEEEecc
Confidence 4799999999999998 677889998754 9999999999 778999998888888776665444 899998665
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------C
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------D 145 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------~ 145 (346)
+++ +.++|.+|.+.| +++||+||.+. +..+....++ ..++++|++++++|.++++||||++++. +
T Consensus 128 --~~~-~~~~l~~l~~~G-v~~~k~f~~~~-~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g 201 (451)
T PRK06189 128 --VPG-NLEHLRELAEAG-VIGFKAFMSNS-GTDEFRSSDD-LTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQG 201 (451)
T ss_pred --ccc-CHHHHHHHHHcC-CcEEEEEcccc-CCCCcCcCCH-HHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcC
Confidence 443 578999998889 78999998541 1112334455 7899999999999999999999987531 1
Q ss_pred -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093 146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG 212 (346)
Q Consensus 146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~ 212 (346)
+..+|..++.+++ .+|+++|+|+||+|+||++++++|+++| |.+||||||||||+|+++++..
T Consensus 202 ~~~~~~~~~~~P~~~E~~~v~~~l--~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~-- 277 (451)
T PRK06189 202 KTDVRDYLESRPVVAELEAVQRAL--LYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER-- 277 (451)
T ss_pred CCChhHccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC--
Confidence 1357999999999 8999999999999999999999999887 7899999999999999999864
Q ss_pred CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc-cCCC--CCCccchhHHHHHHHHHHH-h-cCCHH
Q 019093 213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE-CACG--CAGIYNAPVALSLYAKVFE-E-MGALD 287 (346)
Q Consensus 213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~-~~~~--~~G~~g~e~~lp~l~~~~~-~-~~~l~ 287 (346)
+++.+||+||||++++|++||++|++|.||+ |+|||+||+.++|. .++. ++|++|+|+.+|++++..+ + ..+++
T Consensus 278 ~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~-i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~ 356 (451)
T PRK06189 278 IGAVAKCAPPLRSRSQKEELWRGLLAGEIDM-ISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLE 356 (451)
T ss_pred cCCceEEeCCCCChhhHHHHHHHHhCCCceE-EECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHH
Confidence 4689999999999999999999999999999 99999999998886 3443 3599999999999987543 3 34899
Q ss_pred HHHHHHchhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 288 KLEAFTSFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 288 ~lv~~~s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++++++|.||||+|||+++ +|||+||| ++|++++++++|+++|||| +|++++|+|.++
T Consensus 357 ~~~~~~t~npA~~lgl~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t 423 (451)
T PRK06189 357 TIARLLATNPAKRFGLPQKGRLEVGADADFVLVDLDETYTLTKEDLFYRHKQSPY-EGRTFPGRVVAT 423 (451)
T ss_pred HHHHHHhhhHHHHhCCCCCCcccCCCcCCEEEEcCCCCEEECHHHhhhcCCCCCc-CCcEEEeEEEEE
Confidence 9999999999999999632 89999999 7999999999999999999 799999999764
No 19
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=6.9e-67 Score=508.25 Aligned_cols=327 Identities=22% Similarity=0.271 Sum_probs=283.9
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++||||+||+|||+|+ +..++||+.+++ ||||||++|||+.|+.++.+.++.+++++++.+. +||.+++++.
T Consensus 10 ~~vlPG~iD~HvH~~~~~~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 87 (374)
T cd01317 10 KILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGI--VRVLPIGALT 87 (374)
T ss_pred CEEecCEEeeccccCCCCccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCc--eeEEEEEEEe
Confidence 5899999999999999 778899998875 9999999999999999999999888887765443 7888888873
Q ss_pred eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093 76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D--- 145 (346)
Q Consensus 76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~--- 145 (346)
.. ++.+.++|.+|.+.| +++||.|. ....++ ..++++|++++++|+++++||||.+++. +
T Consensus 88 ~~~~~~~~~~i~~l~~~G-~~~~k~~~--------~~~~~~-~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~~~g~~~ 157 (374)
T cd01317 88 KGLKGEELTEIGELLEAG-AVGFSDDG--------KPIQDA-ELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNEGKVA 157 (374)
T ss_pred eCCCcccHHHHHHHHHCC-cEEEEcCC--------cCCCCH-HHHHHHHHHHHhcCCeEEEecCChhhhhccCccCChhh
Confidence 21 111367899998889 78999652 122355 7899999999999999999999988642 1
Q ss_pred --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
...+|..++.+++ .+|+.+|+|+||+|+|+++++++++++| |..+++|+|||||+||++++.. +++
T Consensus 158 ~~~~~~~~p~~~e~~~v~~~~--~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~--~~~ 233 (374)
T cd01317 158 SRLGLPGIPPEAETIMVARDL--ELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES--YDT 233 (374)
T ss_pred HHhCCCCCCHHHHHHHHHHHH--HHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc--cCC
Confidence 1357888999999 8999999999999999999999999987 8889999999999999999864 468
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc--CCHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM--GALDKLEA 291 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~--~~l~~lv~ 291 (346)
++||+||||+++++++||+++++|.||+ |||||+||+.++|..+|+ .+|++|+|+.||++++.+++. .+++++++
T Consensus 234 ~~k~~Pplr~~~~~~~l~~~~~~G~i~~-igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~~~~~~~~~~~~~ 312 (374)
T cd01317 234 NAKVNPPLRSEEDREALIEALKDGTIDA-IASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLVKGGLLTLPDLIR 312 (374)
T ss_pred ceEEcCCCCCHHHHHHHHHHHhcCCceE-EEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 9999999999999999999999999999 999999999888876554 469999999999998766553 38999999
Q ss_pred HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++|.||||+||++.+ +|||+||| .+|+++++.++|+++|||| +|++++|+|+++
T Consensus 313 ~~t~npA~~lgl~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~-~G~~l~g~~~~t 374 (374)
T cd01317 313 ALSTNPAKILGLPPGRLEVGAPADLVLFDPDAEWIVDEETFRSKSKNTPF-DGQKLKGRVLAT 374 (374)
T ss_pred HHHHHHHHHhCCCCCcccCCCcCCEEEECCCCCEEEChhhccccCCCCCC-CCCEEeEEEEEC
Confidence 999999999999532 89999999 9999999999999999999 799999999874
No 20
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=3.4e-67 Score=524.46 Aligned_cols=332 Identities=17% Similarity=0.201 Sum_probs=279.4
Q ss_pred eEEecCccccceecCC----CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD----GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM 72 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~----g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 72 (346)
++|+||+||+|+|+++ +..++|++.+++ |||||+++||++.|+.++.+.++.+++..+..+. +||++|+
T Consensus 50 ~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~--vd~~~~~ 127 (477)
T PRK13404 50 RLVLPGGVDSHCHIDQPSGDGIMMADDFYTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAV--IDYAFHL 127 (477)
T ss_pred CEEecCEEEeEEcCCccccCCccccchHHHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcE--EEEEEEE
Confidence 4799999999999986 355688888764 9999999999988888888888887776554443 8999987
Q ss_pred EEEeCCCCCH-HHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-------
Q 019093 73 TLYLTDTTSP-DEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------- 144 (346)
Q Consensus 73 ~~~~~~~~~~-~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------- 144 (346)
++..+..... +++.++.+.| +.+||+|+.+ +...+ ++ ..+++++++++++|.++++||||.+++.
T Consensus 128 ~~~~~~~~~~~~~v~~l~~~G-~~~iKi~~~~----~~~~~-~~-~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~ 200 (477)
T PRK13404 128 IVADPTEEVLTEELPALIAQG-YTSFKVFMTY----DDLKL-DD-RQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLL 200 (477)
T ss_pred EecCCChhhHHHHHHHHHHcC-CCEEEEEecC----CCCCC-CH-HHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH
Confidence 7621111123 5788888888 7899999842 12234 34 7899999999999999999999987631
Q ss_pred --C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhc
Q 019093 145 --D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALF 209 (346)
Q Consensus 145 --~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~ 209 (346)
+ ...+|..++.+++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.
T Consensus 201 ~~G~~~~~~~~~~rp~~~E~~~v~~~~--~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~ 278 (477)
T PRK13404 201 AAGLTAPKYHAISRPMLAEREATHRAI--ALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLD 278 (477)
T ss_pred HCCCcchhhccccCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhc
Confidence 1 1358999999999 8999999999999999999999999988 789999999999999999986
Q ss_pred cCC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc--------ccCCC--CCCccchhHHHHHHHH
Q 019093 210 QGG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK--------ECACG--CAGIYNAPVALSLYAK 278 (346)
Q Consensus 210 ~~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K--------~~~~~--~~G~~g~e~~lp~l~~ 278 (346)
..+ +|+.+|||||||+++||++||++|.+|.||+ |+|||+||+.++| ..+|+ .+|++|+|+.+|++++
T Consensus 279 ~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~-i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~ 357 (477)
T PRK13404 279 RPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEV-FSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFS 357 (477)
T ss_pred CccccCCceEECCCCCChHHHHHHHHHHhCCCceE-EecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHH
Confidence 421 4689999999999999999999999999999 9999999998887 22344 3599999999999997
Q ss_pred HHHh--cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 279 VFEE--MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 279 ~~~~--~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
.+++ ..+++++++++|.||||+||| +++ +|||+||| .+|+|+++.++++++|||| +|++++|+|.++
T Consensus 358 ~~v~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~~v~~~~~~~~~~~sp~-~g~~~~g~v~~t 436 (477)
T PRK13404 358 EGVVKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREVTITNADLHHAADYTPY-EGMRVTGWPVTV 436 (477)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccEEEchHHhcccCCCCcc-cceEEeeeEEEE
Confidence 5543 358999999999999999999 542 89999999 8999999999999999999 799999999763
No 21
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=5.7e-67 Score=518.32 Aligned_cols=324 Identities=21% Similarity=0.203 Sum_probs=274.4
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +..++|++.+++ ||+||+++|||+.|++++.+.+..+.+++++.+. +||++++++
T Consensus 52 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~--v~~~~~~~~- 128 (438)
T PRK07575 52 LTLLPGVIDPQVHFREPGLEHKEDLFTASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCV--VNYGFFIGA- 128 (438)
T ss_pred CEEcccEEEeeeccCCCCCcCcchHHHHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcE--EEEEEEccc-
Confidence 4799999999999998 778899998865 9999999999999999999988888777665444 899999776
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC-----------
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------- 144 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------- 144 (346)
+++ +.+++.++. | +.|||+|+.+ ...+..+.+. ..+++++ ++.|.++++||||.+++.
T Consensus 129 -~~~-~l~~l~~~~--~-~~g~~~f~~~--~~~~~~~~~~-~~~~~~~---~~~~~~v~~h~e~~~l~~~~~~~~~g~~~ 197 (438)
T PRK07575 129 -TPD-NLPELLTAN--P-TCGIKIFMGS--SHGPLLVDEE-AALERIF---AEGTRLIAVHAEDQARIRARRAEFAGISD 197 (438)
T ss_pred -ccc-CHHHHHHhh--C-CeEEEEEEee--CCCCcccCcH-HHHHHHH---HhCCCEEEEeCcChHHHHhhhHhhccCcC
Confidence 443 566665442 5 6899999842 1112234443 4455544 356999999999987521
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCce
Q 019093 145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHN 217 (346)
Q Consensus 145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~ 217 (346)
.+..+|.+++.+++ .+|+.+|+|+||+|+||++++++|+++|+.+||||||||||+||++++.+ +++.+
T Consensus 198 ~~~~~~~~p~~aE~~av~~~~--~la~~~g~~lhi~HiSt~~~v~~i~~~k~~~vt~ev~phhL~l~~~~~~~--~~~~~ 273 (438)
T PRK07575 198 PADHSQIQDEEAALLATRLAL--KLSKKYQRRLHILHLSTAIEAELLRQDKPSWVTAEVTPQHLLLNTDAYER--IGTLA 273 (438)
T ss_pred cccccccCcHHHHHHHHHHHH--HHHHHHCCCEEEEECCCHHHHHHHHHhcCCCEEEEEchhhheeCHHHHhC--CCceE
Confidence 12358999999999 89999999999999999999999999987789999999999999999864 46899
Q ss_pred EEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh-cCCHHHHHHHHc
Q 019093 218 YCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE-MGALDKLEAFTS 294 (346)
Q Consensus 218 k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s 294 (346)
|||||||+++||++||++|++|+||+ |+|||+||+.++|..+|+. +|++|+|+.+|++|+.+.+ +.+++++++++|
T Consensus 274 k~~PPLR~~~d~~~L~~~l~~G~id~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~~~~~lsl~~~~~~~s 352 (438)
T PRK07575 274 QMNPPLRSPEDNEALWQALRDGVIDF-IATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAMRGKCTVAQVVRWMS 352 (438)
T ss_pred EEeCCCCCHHHHHHHHHHHhCCCCCE-EecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHHhcCCCCHHHHHHHHh
Confidence 99999999999999999999999999 9999999999999877653 5999999999999876554 358999999999
Q ss_pred hhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 295 FNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 295 ~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
.||||+||++++ +|||+||| .+|+++.+.++|+++|||| +|++++|+|.+
T Consensus 353 ~npAk~lgl~~~G~L~~G~~ADlvi~D~~~~~~v~~~~~~s~~~~sp~-~g~~~~G~v~~ 411 (438)
T PRK07575 353 TAVARAYGIPNKGRIAPGYDADLVLVDLNTYRPVRREELLTKCGWSPF-EGWNLTGWPVT 411 (438)
T ss_pred hhHHHHcCCCCCCccCCCCcCCEEEEcCCCCEEEchHHccccCCCCCC-CCCEEeeEEEE
Confidence 999999999532 89999999 8899999999999999999 79999999975
No 22
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=1.6e-66 Score=515.77 Aligned_cols=326 Identities=17% Similarity=0.209 Sum_probs=274.3
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +..++|++.+++ ||+||+++|||+.|+.++.+.+..+.+++++.+. +||+++++.
T Consensus 52 ~~v~PG~ID~HvH~~~~~~~~~e~~~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~--~d~~~~~~~- 128 (444)
T PRK09060 52 LHVLPGVIDSQVHFREPGLEHKEDLETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMH--CDFAFYVGG- 128 (444)
T ss_pred CEEccCEEeccccccCCCCCccchHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccce--eeEEEEecc-
Confidence 4799999999999998 778889998864 9999999999999999999988888777665444 899998765
Q ss_pred eCCCCCHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093 76 LTDTTSPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------- 144 (346)
Q Consensus 76 ~~~~~~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------- 144 (346)
.. .+.+++.++.. .| +.|||+||.+ +.....+.|. ..+.++++++ |.++++||||.+++.
T Consensus 129 -~~-~~~~~l~el~~~~g-v~g~k~fm~~--~~~~~~~~d~-~~l~~~~~~~---~~~v~~H~E~~~l~~~~~~~~~~g~ 199 (444)
T PRK09060 129 -TR-DNADELAELERLPG-CAGIKVFMGS--STGDLLVEDD-EGLRRILRNG---RRRAAFHSEDEYRLRERKGLRVEGD 199 (444)
T ss_pred -CC-CCHHHHHHHHhhcC-ceEEEEEecc--CCCCcccCCH-HHHHHHHHhC---CCeEEEECCCHHHHHHHHHHHhcCC
Confidence 33 24456666643 46 7899999853 1122234565 6677776554 889999999987521
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhh-hccCCCCCc
Q 019093 145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNA-LFQGGLRPH 216 (346)
Q Consensus 145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~-~~~~~~~~~ 216 (346)
.+..+|..++++++ .+|+.+|+|+||+|+||++++++|+++|. .||||||||||+|++++ +.. ++++
T Consensus 200 ~~~~~~~~p~~aE~~av~~~~--~la~~~~~~lhi~h~st~~~v~~i~~~~~-~vt~ev~ph~l~l~~~~~~~~--~~~~ 274 (444)
T PRK09060 200 PSSHPVWRDEEAALLATRRLV--RLARETGRRIHVLHVSTAEEIDFLADHKD-VATVEVTPHHLTLAAPECYER--LGTL 274 (444)
T ss_pred cccccccCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHhCC-CeEEEeChHHhccCchhhccc--CCce
Confidence 12358889999999 89999999999999999999999999884 59999999999999998 543 5689
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHHHHHHH
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDKLEAFT 293 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~ 293 (346)
+|||||||+++||++||+++++|+||+ |+|||+||+.++|..+|. .+|++|+|+++|++++.+.+ +.+++++++++
T Consensus 275 ~k~~PPlr~~~~~~~l~~al~~G~id~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~l~~~~v~~g~l~~~~~~~~~ 353 (444)
T PRK09060 275 AQMNPPIRDARHRDGLWRGVRQGVVDV-LGSDHAPHTLEEKAKPYPASPSGMTGVQTLVPIMLDHVNAGRLSLERFVDLT 353 (444)
T ss_pred EEEeCCCCCHHHHHHHHHHHhCCCccE-EecCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999999999999999999 999999999999976654 35999999999999976433 35899999999
Q ss_pred chhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 294 SFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 294 s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
|.||||+|||+++ +||||||| ++|+|+.+.++|+++|||| +|++++|+|.++
T Consensus 354 s~~pa~~~gl~~~G~l~~G~~ADlvl~d~~~~~~v~~~~~~s~~~~sp~-~g~~l~g~~~~t 414 (444)
T PRK09060 354 SAGPARIFGIAGKGRIAVGYDADFTIVDLKRRETITNEWIASRCGWTPY-DGKEVTGWPVGT 414 (444)
T ss_pred hHhHHHHhCCCCCCcccCCCcCCEEEEcCCCCEEEChHHhcccCCCCCC-CCCEEeeeEEEE
Confidence 9999999999543 89999999 8999999999999999999 799999999753
No 23
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=6.4e-66 Score=507.17 Aligned_cols=329 Identities=23% Similarity=0.314 Sum_probs=280.4
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +...++++.+++ |||||+++||++.|+.++.+.++.+++++++.+. |||.+++++.
T Consensus 35 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~--vd~~~~~~~~ 112 (411)
T TIGR00857 35 LLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSL--VDVHLYGGVT 112 (411)
T ss_pred CEEecCEEEcccCCCCCCCccHhHHHHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEe
Confidence 4799999999999997 666778887653 9999999999999999999988888877665444 9999998873
Q ss_pred eCC-CCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093 76 LTD-TTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------- 144 (346)
Q Consensus 76 ~~~-~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------- 144 (346)
... +....++.+|.++| ++| |+|..+ +....+. ..++++|++++++|+++++||||++++.
T Consensus 113 ~~~~~~~l~e~~~l~~~G-v~g-~~f~~~-----~~~~~~~-~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~ 184 (411)
T TIGR00857 113 QGNQGKELTEAYELKEAG-AVG-RMFTDD-----GSEVQDI-LSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSA 184 (411)
T ss_pred cCCccccHHHHHHHHHCC-cEE-EEEEeC-----CcccCCH-HHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCccc
Confidence 211 11356788888788 778 444321 1122355 8899999999999999999999987632
Q ss_pred -------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 145 -------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 145 -------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
.+..+|..++.+++ .+|+.+|+|+||+|+||++++++|+++| |.+||||||||||+||++++.. +++
T Consensus 185 ~~~~~~~~p~~aE~~ai~~~~--~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~--~~~ 260 (411)
T TIGR00857 185 AQLGLPARPPEAEEVAVARLL--ELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVAR--LDG 260 (411)
T ss_pred HhhCCCCCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhC--CCc
Confidence 12468999999999 8999999999999999999999999988 7899999999999999999864 468
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHhc-CCHHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEEM-GALDKLEAF 292 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~ 292 (346)
++|||||||+++||++||++|++|.||+ |+|||+||+.++|..++. .+|++|+|+.+|++++.+++. .++++++++
T Consensus 261 ~~k~~Pplr~~~~~~~L~~~l~~g~i~~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~ 339 (411)
T TIGR00857 261 NGKVNPPLREKEDRLALIEGLKDGIIDI-IATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQLLVKGLISLKDLIRM 339 (411)
T ss_pred cEEEcCCCCCHHHHHHHHHHHhcCCCcE-EEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 9999999999999999999999999999 999999999999876554 469999999999999876654 589999999
Q ss_pred HchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 293 TSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 293 ~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+|.|||++||++. + +|||+||| ..|+++.++++++++|||| +|++++|+|.++
T Consensus 340 ~t~~pa~~~g~~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~~~~~~sp~-~g~~~~g~v~~t 401 (411)
T TIGR00857 340 LSINPARIFGLPDKGTLEEGNPADITVFDLKKEWTINAETFYSKAKNTPF-EGMSLKGKPIAT 401 (411)
T ss_pred HhHHHHHHhCCCCCCccCCCCcCCEEEEcCCCCEEEchHHCccCCCCCCc-CCCEEEeEEEEE
Confidence 9999999999964 2 79999999 7899999999999999999 799999998763
No 24
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=5.8e-65 Score=504.89 Aligned_cols=323 Identities=21% Similarity=0.254 Sum_probs=275.2
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +..++|++.+++ |||||+++|||+.|+.++.+.++.+.+.+++.+. +||.++++.
T Consensus 50 ~~v~PG~ID~H~H~~~~g~~~~e~~~~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~--v~~~~~~~~- 126 (443)
T PRK02382 50 MLLLPGGIDVHVHFREPGYTHKETWYTGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSI--VDFGINGGV- 126 (443)
T ss_pred CEEcCCEeeeeeeccCCCCCchhhHHHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCce--EEEEEEeee-
Confidence 4799999999999998 777888887754 9999999999999999998888887776655443 899888664
Q ss_pred eCCCCCHHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------
Q 019093 76 LTDTTSPDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV---------- 144 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~---------- 144 (346)
.. +.+++.+|.+.| +.++ |+|+.+. .+...+ +. ..++++|++++++|+++++||||.++..
T Consensus 127 -~~--~~~~l~~l~~~g-v~~~gkv~~~~~--~~~~~~-~~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~g~~ 198 (443)
T PRK02382 127 -TG--NWDPLESLWERG-VFALGEIFMADS--TGGMGI-DE-ELFEEALAEAARLGVLATVHAEDEDLFDELAKLLKGDA 198 (443)
T ss_pred -cc--chhhHHHHHhcC-ccceeEEEEEec--CCCccc-CH-HHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHhhcCCC
Confidence 32 466788888888 7888 9998531 122333 44 7899999999999999999999986521
Q ss_pred --------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093 145 --------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH 216 (346)
Q Consensus 145 --------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~ 216 (346)
.+..+|..++.+++ .+|+.+|+|+||+|+||++++++|+++| ||||||||||+||++++.. +++.
T Consensus 199 ~~~~~~~~~p~~~E~~av~~~~--~la~~~g~~~hi~h~ss~~~~~~i~~~~---vt~ev~ph~L~l~~~~~~~--~~~~ 271 (443)
T PRK02382 199 DADAWSAYRPAAAEAAAVERAL--EVASETGARIHIAHISTPEGVDAARREG---ITCEVTPHHLFLSRRDWER--LGTF 271 (443)
T ss_pred CHhhCCCcCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHCC---cEEEEchhhhhcCHHHHhc--cCce
Confidence 01358999999999 8999999999999999999999999875 9999999999999999864 4688
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC--CCccchhHHHHHHHHHHHh-cCCHHHHHHHH
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC--AGIYNAPVALSLYAKVFEE-MGALDKLEAFT 293 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~ 293 (346)
+|||||||+++||++||++|++|+||+ |+|||+||+.++|..+++. +|++|+|+++|++++.+.+ +.+++++++++
T Consensus 272 ~k~~PPlr~~~d~~aL~~~l~~g~i~~-i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~l~~~~~~~ 350 (443)
T PRK02382 272 GKMNPPLRSEKRREALWERLNDGTIDV-VASDHAPHTREEKDADIWDAPSGVPGVETMLPLLLAAVRKNRLPLERVRDVT 350 (443)
T ss_pred EEEcCCCCChHHHHHHHHHHhCCCCCE-EEcCCCCCCHHHhcCChhhCCCCcccHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999999999999999999 9999999999999876653 5999999999999876544 35899999999
Q ss_pred chhhhhhcCCCCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 294 SFNGPDFYGLPRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 294 s~nPAki~gl~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
|.|||++||++.+ +|||+||| ..|+++.+.++|+++|||| +|+++. +|.+
T Consensus 351 t~~pA~~~g~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~-~v~~ 409 (443)
T PRK02382 351 AANPARIFGLDGKGRIAEGYDADLVLVDPDAAREIRGDDLHSKAGWTPF-EGMEGV-FPEL 409 (443)
T ss_pred hHHHHHHcCCCCCCccCCCCcCCEEEEcCCCcEEEcHHHhcccCCCCCc-CCCEec-eEEE
Confidence 9999999999542 79999999 8899999999999999999 799866 5543
No 25
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=5.1e-64 Score=498.26 Aligned_cols=331 Identities=17% Similarity=0.165 Sum_probs=281.8
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|+|+++ +..++|++.+++ |||||+++|| |+.|+.++.+.+..+.+.+++.+. +||+++++.
T Consensus 47 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~ 124 (443)
T TIGR03178 47 LVVFPGVVDTHVHINEPGRTEWEGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLA--VDVGFWGGL 124 (443)
T ss_pred CEEeccEeccccccCCCCccccchHHHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCc--eeEEEEecc
Confidence 4799999999999998 777888888763 9999999999 788988888888887776654333 899988665
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC---------
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD--------- 145 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~--------- 145 (346)
++ .+.+++.++.+.| +.+||+||++. +.......+. ..++++|+++++.|+++++|||+.++...
T Consensus 125 --~~-~~~~~i~~~~~~G-~~~ik~~~~~~-~~~~~~~~~~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g 198 (443)
T TIGR03178 125 --VP-YNLDDLRELDEAG-VVGFKAFLSPS-GDDEFPHVDD-WQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQG 198 (443)
T ss_pred --CC-CCHHHHHHHHHCC-CcEEEEEeccc-CCCCcccCCH-HHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcC
Confidence 44 3678899998889 78999998642 1112223344 78999999999999999999999875320
Q ss_pred -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093 146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG 212 (346)
Q Consensus 146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~ 212 (346)
+..+|.+++.+++ .+++.+|+|+|++|+|+.+++++|+++| |.++++|||||||+|+++++..
T Consensus 199 ~~~~~~~~~~~p~~ae~~~~~~~~--~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~-- 274 (443)
T TIGR03178 199 GVGADAYLASRPVFAEVEAIRRTL--ALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD-- 274 (443)
T ss_pred CCChhHhcCcCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC--
Confidence 1357889999999 8999999999999999999999999987 7899999999999999999864
Q ss_pred CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc-ccCCC--CCCccchhHHHHHHHHHHHh--cCCHH
Q 019093 213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK-ECACG--CAGIYNAPVALSLYAKVFEE--MGALD 287 (346)
Q Consensus 213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K-~~~~~--~~G~~g~e~~lp~l~~~~~~--~~~l~ 287 (346)
+++.++|+||||++++|++||++|++|.||+ |+|||+||+.++| ..+|. .+|++|+|+.+|++++..++ +.+++
T Consensus 275 ~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~-i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~ 353 (443)
T TIGR03178 275 GGTLAKCAPPIRDLANQEGLWEALLNGLIDC-VVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLE 353 (443)
T ss_pred cCcceEEcCCCCChHHHHHHHHHHHcCCccE-EeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHH
Confidence 4689999999999999999999999999999 9999999999888 44443 35999999999999875533 45899
Q ss_pred HHHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 288 KLEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 288 ~lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++++++|.|||++||++. + +|||+||| ++|+++.+.++|+++|||| +|++++|+|.++
T Consensus 354 ~~~~~~t~~pA~~~g~~~~G~l~~G~~Ad~vi~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t 420 (443)
T TIGR03178 354 DIARLMATNPAKRFGLAQKGRIAPGKDADFVFVDPDESYTLTPDDLYYRHKVSPY-VGRTIGGRVRAT 420 (443)
T ss_pred HHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEcCCCcEEEcHHHhhhcCCCCCc-CCcEEeeEEEEE
Confidence 999999999999999943 2 89999999 6899999999999999999 799999999763
No 26
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=3.8e-62 Score=484.84 Aligned_cols=327 Identities=20% Similarity=0.216 Sum_probs=276.2
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+++ +..++|++.+++ |||||+++|||+.|+.++.+.+..+++.+++.+. +||++++++
T Consensus 50 ~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~- 126 (444)
T PRK09236 50 RYLLPGMIDDQVHFREPGLTHKGDIASESRAAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSL--ANYSFYFGA- 126 (444)
T ss_pred CEECCCEEEcccccccCcccccccHHHHHHHHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeE--EEEEEEecc-
Confidence 4799999999999998 777788887654 9999999999999999999988887776654443 899998764
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC----------C
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV----------D 145 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~----------~ 145 (346)
.. .+.+++.+|.+.| +.|||+|+.+. .+..++.+. ..++++++ ..|.++++||||.+++. +
T Consensus 127 -~~-~~~~e~~~l~~~g-~~g~k~~~~~~--~~~~~~~~~-~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g 197 (444)
T PRK09236 127 -TN-DNLDEIKRLDPKR-VCGVKVFMGAS--TGNMLVDNP-ETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYG 197 (444)
T ss_pred -Cc-ccHHHHHHHHHcc-CcEEEEEeccC--CCCcccCcH-HHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcC
Confidence 43 3678898988888 78999998531 122334554 45666654 44899999999875431 1
Q ss_pred ------------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093 146 ------------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG 211 (346)
Q Consensus 146 ------------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~ 211 (346)
...+|..++.+++ .+|+.+|+|+||+|+||++++++++++| |.+||||||||||+|+++++..
T Consensus 198 ~~~~~~~~~~~rp~~ae~~av~~~~--~la~~~~~~~hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~- 274 (444)
T PRK09236 198 DDIPAEMHPLIRSAEACYKSSSLAV--SLAKKHGTRLHVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR- 274 (444)
T ss_pred CCCChhhccccCCHHHHHHHHHHHH--HHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc-
Confidence 1257888899999 8999999999999999999999999887 7899999999999999999875
Q ss_pred CCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh-cCCHHH
Q 019093 212 GLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE-MGALDK 288 (346)
Q Consensus 212 ~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~-~~~l~~ 288 (346)
+++.+++|||||++++|++||+++++|.||+ |+|||+||+.++|..+|. .+|++|+|+++|++++.+.+ ..++++
T Consensus 275 -~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~-igtDh~p~~~~~k~~~~~~~~~G~~~~e~~l~~l~~~v~~~~~~~~~ 352 (444)
T PRK09236 275 -LGNLIKCNPAIKTASDREALRQALADDRIDV-IATDHAPHTWEEKQGPYFQAPSGLPLVQHALPALLELVHEGKLSLEK 352 (444)
T ss_pred -cCceEEECCCCCCHHHHHHHHHHHhCCCCcE-EECCCCCCCHHHhcCCcccCCCCcccHHHHHHHHHHHHHhcCCCHHH
Confidence 4689999999999999999999999999999 999999999999976665 35999999999999875444 358999
Q ss_pred HHHHHchhhhhhcCCCC-C------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 289 LEAFTSFNGPDFYGLPR-N------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 289 lv~~~s~nPAki~gl~~-k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+++++|.||||+||++. + +|||+||| ++|+++.++++|+++|||| +|++++|+|.++
T Consensus 353 ~~~~~t~~pA~~lgl~~~G~l~~G~~ADlvi~d~~~~~~~~~~~~~s~~~~sp~-~g~~~~g~v~~t 418 (444)
T PRK09236 353 VVEKTSHAPAILFDIKERGFIREGYWADLVLVDLNSPWTVTKENILYKCGWSPF-EGRTFRSRVATT 418 (444)
T ss_pred HHHHHHHhHHHhcCCCCCCccccCCcCCEEEEcCCCCEEEchHHhcccCCCCCC-CCCEEeeeEEEE
Confidence 99999999999999953 2 89999999 8899999999999999999 799999999764
No 27
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=5.8e-61 Score=481.01 Aligned_cols=329 Identities=16% Similarity=0.126 Sum_probs=272.1
Q ss_pred eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|+|+++ +..++|++.|++ ||||||+||++.. .....+.++.+++++.+ +. +||+++++
T Consensus 53 ~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s~aAl~gGvTTv~D~~~~~-~~~~~~~~~~~~~~~~~-~~--~d~~~~~~ 128 (486)
T PLN02942 53 KFVMPGGIDPHTHLAMPFMGTETIDDFFSGQAAALAGGTTMHIDFVIPV-NGNLLAGYEAYEKKAEK-SC--MDYGFHMA 128 (486)
T ss_pred CEEecCEeeeeeccCcccCCCcccchHHHHHHHHHcCCCeEEEeCCCCC-CCCHHHHHHHHHHHHhh-cC--CCEEEEEE
Confidence 4899999999999997 356789998875 9999999996433 22336777777666653 33 89998876
Q ss_pred EEeCCCC--CHHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------
Q 019093 74 LYLTDTT--SPDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------ 144 (346)
Q Consensus 74 ~~~~~~~--~~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------ 144 (346)
. ++.. ..+++.++.+ .| +.+||+|+++. ....+ ++ +.+++++++++++|.++++||||.++..
T Consensus 129 ~--~~~~~~~~~e~~~l~~~~g-v~~~k~~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~ 200 (486)
T PLN02942 129 I--TKWDDTVSRDMETLVKEKG-INSFKFFMAYK---GSLMV-TD-ELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRM 200 (486)
T ss_pred e--cCCcHhHHHHHHHHHHhCC-CceEEEEEecC---CCCCC-CH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence 5 3321 2457777754 57 78999998642 11223 44 7899999999999999999999976421
Q ss_pred --------------ChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093 145 --------------DIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL 208 (346)
Q Consensus 145 --------------~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~ 208 (346)
.+..+|..++.+++ .+++++|+|+||+|+|++++++.|+.+| |.+|+||||||||+|+++++
T Consensus 201 ~~~G~~~~~~~~~~rP~~~E~~av~~~~--~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~ 278 (486)
T PLN02942 201 IELGITGPEGHALSRPPLLEGEATARAI--RLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKL 278 (486)
T ss_pred HHcCCCChhhhhccCCchHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHh
Confidence 12358999999999 8999999999999999999999999887 89999999999999999998
Q ss_pred ccCC--CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHH
Q 019093 209 FQGG--LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFE 281 (346)
Q Consensus 209 ~~~~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~ 281 (346)
...+ +++.+|||||||++++|++||+++++|.||+ |||||+||+.++|.. +|. .+|++|+|+.+|++++.++
T Consensus 279 ~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~-igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~ 357 (486)
T PLN02942 279 WDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQL-VGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMV 357 (486)
T ss_pred cCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEE-EECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHH
Confidence 5311 4688999999999999999999999999999 999999999988853 343 3599999999999987655
Q ss_pred hc--CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 282 EM--GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 282 ~~--~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
+. .+++++++++|.||||+||| +++ +|||+||| .+|+|+.+.++|+++|||| +|++++|+|.++
T Consensus 358 ~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~~~~~~s~~~~~py-~g~~l~g~v~~t 433 (486)
T PLN02942 358 ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTISAKTHHSRIDTNVY-EGRRGKGKVEVT 433 (486)
T ss_pred HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEcHHHccccCCCCCc-cCcEeeeeEEEE
Confidence 54 48999999999999999999 432 89999999 8999999999999999999 799999999863
No 28
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=9.5e-61 Score=475.39 Aligned_cols=331 Identities=17% Similarity=0.188 Sum_probs=280.6
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCC-CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMP-NLKPPITTTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mP-nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|+|+++ +..++|++.+++ ||||||++|| |+.|+.++.+.++.+.+..+..+. +||++++++
T Consensus 48 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~ 125 (447)
T cd01315 48 LVVMPGLIDTHVHINEPGRTEWEGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLH--VDVGFWGGL 125 (447)
T ss_pred CEEeccEeeceeccCCCCccccccHHHHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCce--eeEEEEEee
Confidence 4799999999999998 777888887764 9999999999 667888888888877776544333 899888765
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC---------
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD--------- 145 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~--------- 145 (346)
++. ..+++.++.+.| +.+||+|+.+.. ..+....+. ..+++++++++++|+++++|+||.+++..
T Consensus 126 --~~~-~~~ei~~l~~~G-~~giKv~~~~~~-~~~~~~~~~-~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g 199 (447)
T cd01315 126 --VPG-NLDQLRPLDEAG-VVGFKCFLCPSG-VDEFPAVDD-EQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKG 199 (447)
T ss_pred --cCC-CHHHHHHHHHcC-CcEEEEEecccC-CCCcccCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcC
Confidence 443 678899998888 789999986421 122223344 78999999999999999999999875320
Q ss_pred -----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCC
Q 019093 146 -----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGG 212 (346)
Q Consensus 146 -----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~ 212 (346)
...+|..++.+++ .+|+.+|+|+||+|+|+++++++++++| |.+++||||||||+|+++++..
T Consensus 200 ~~~~~~~~~~~p~~~e~~~~~~~~--~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~-- 275 (447)
T cd01315 200 KRDYRDYLASRPVFTEVEAIQRIL--LLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD-- 275 (447)
T ss_pred CCChHHhhccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC--
Confidence 1246888999999 8999999999999999999999999887 7899999999999999999865
Q ss_pred CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc---cCCC--CCCccchhHHHHHHHHHHHh--cCC
Q 019093 213 LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE---CACG--CAGIYNAPVALSLYAKVFEE--MGA 285 (346)
Q Consensus 213 ~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~---~~~~--~~G~~g~e~~lp~l~~~~~~--~~~ 285 (346)
+++.++|+||||+++||++||++|++|.||+ |+|||+||+.++|. .++. ..|++|+|+.+|++++.+++ ..+
T Consensus 276 ~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~-i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~ 354 (447)
T cd01315 276 GGTEFKCAPPIRDAANQEQLWEALENGDIDM-VVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLS 354 (447)
T ss_pred CCCceEECCCCCChHHHHHHHHHHhCCceeE-EeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999 99999999999986 3333 35999999999999876554 358
Q ss_pred HHHHHHHHchhhhhhcCCC-CC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 286 LDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 286 l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
++++++++|.|||++||++ ++ +|||+|+| .+|+++.+.++++++|+|| +|++++|+|.++
T Consensus 355 ~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~t 424 (447)
T cd01315 355 LEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEEEFTVDAEDLYYKNKISPY-VGRTLKGRVHAT 424 (447)
T ss_pred HHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCCCEEEcHHHccccCCCCCc-cCeEEeeeEEEE
Confidence 9999999999999999995 32 89999999 7899999999999999999 799999999763
No 29
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=6.4e-62 Score=456.07 Aligned_cols=333 Identities=16% Similarity=0.136 Sum_probs=288.5
Q ss_pred eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|+|++. |.+.+|||.+|+ ||+|+||||+-..++.+..+.++.+++++.... +|||++|++
T Consensus 62 ~~ViPGgID~Hthlq~p~~G~ts~DdF~~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~--cCDyglhv~ 139 (522)
T KOG2584|consen 62 KMVIPGGIDPHTHLQMPFMGMTSVDDFFQGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKV--CCDYGLHVG 139 (522)
T ss_pred cEEecCccCccceeccccCCccchhhhhcccHHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCce--eeeeeeeEe
Confidence 5799999999999997 788899999985 999999999866667888999999988776443 399999999
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------- 144 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~--------- 144 (346)
++.+.....+||+-|.+.-+|.|||+||+|. +-.++.| .+||++|+.++++|.+.+|||||.+++.
T Consensus 140 It~W~~~v~eem~~l~~ekGvnsF~~fmayk---~~~~v~d--~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~ 214 (522)
T KOG2584|consen 140 ITWWSPSVKEEMEILVKEKGVNSFKFFMAYK---DLYMVRD--SELYEALKVCAELGALAMVHAENGDAIAEGQQRLLEL 214 (522)
T ss_pred eeecCcchHHHHHHHhhhcCcceEEeeeeec---cccccCH--HHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHc
Confidence 9643334677888887643399999999873 3345666 7999999999999999999999998762
Q ss_pred C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093 145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG 211 (346)
Q Consensus 145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~ 211 (346)
+ +..-|++|+.|++ .+|+..+||+|++||.|+.+.++|.++| |.-|+.|+.-..|.++...|...
T Consensus 215 gitgPEgh~lSRPee~EaEA~~rai--~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~ 292 (522)
T KOG2584|consen 215 GITGPEGHELSRPEELEAEATNRAI--TIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSK 292 (522)
T ss_pred CCcCcccccccCchhhhHHHHHHHH--HHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccC
Confidence 1 2457999999999 8999999999999999999999999998 78899999999999998887654
Q ss_pred CC--CCceEEeCCCCChh-hHHHHHHHHHcCCccEEeecCCCCCCccccccC---CC-CC-CccchhHHHHHHHHHHHhc
Q 019093 212 GL--RPHNYCLPVLKREI-HRQAVVSAVTSGSRKFFLGTDSAPHERGRKECA---CG-CA-GIYNAPVALSLYAKVFEEM 283 (346)
Q Consensus 212 ~~--~~~~k~~PPLR~~~-d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~---~~-~~-G~~g~e~~lp~l~~~~~~~ 283 (346)
.+ .++|+|+||||+.. .++.||.+|+.|.+.. ++||||||+.++|..+ |. .+ |+.|+|.+|+++|+-.+..
T Consensus 293 ~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~-tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~ 371 (522)
T KOG2584|consen 293 DWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQL-TGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHS 371 (522)
T ss_pred ChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccce-eecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhccc
Confidence 43 37899999999976 8999999999999999 9999999999999754 43 24 9999999999999755554
Q ss_pred C--CHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 284 G--ALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 284 ~--~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
| +..++|.++|+|.|||||| |+| |||||||| ...+|+++..+++++++.| |||+++|.|..
T Consensus 372 G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tIS~~th~~~~d~Nif-EGm~~~G~plv 444 (522)
T KOG2584|consen 372 GKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTISAKTHHSANDFNIF-EGMTVHGVPLV 444 (522)
T ss_pred CccCcccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEeccccccccccceee-cCcEecceeEE
Confidence 4 5779999999999999999 887 99999999 8899999999999999999 89999998863
No 30
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=5e-60 Score=467.12 Aligned_cols=326 Identities=24% Similarity=0.289 Sum_probs=274.2
Q ss_pred eEEecCccccceecCC-CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~ 75 (346)
++|+||+||+|+|+|. +..++|++.+++ |||||+++||++.|+.++.+.++.+.+.+++... +||.+++.+.
T Consensus 49 ~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 126 (423)
T PRK09357 49 LVVAPGLVDLHVHLREPGQEDKETIETGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGL--VDVLPVGAIT 126 (423)
T ss_pred CEEeCCEEecccccCCCCccccccHHHHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCc--ccEEEEEEEE
Confidence 4799999999999998 667788887654 9999999999999999988888777766554433 7898887652
Q ss_pred eC-CCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC------C---
Q 019093 76 LT-DTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV------D--- 145 (346)
Q Consensus 76 ~~-~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~------~--- 145 (346)
.. .+...+++.++.+.| +.+||.+. ....+. +.++++++.++++|.++++|+|+..+.. +
T Consensus 127 ~~~~~~~~~~~~~l~~~g-v~~~~~~~--------~~~~~~-~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~g~~~ 196 (423)
T PRK09357 127 KGLAGEELTEFGALKEAG-VVAFSDDG--------IPVQDA-RLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNEGEVS 196 (423)
T ss_pred eCCCCccHHHHHHHHhCC-cEEEECCC--------cccCCH-HHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccCChhh
Confidence 11 112466777777777 66776431 112244 7899999999999999999999876532 1
Q ss_pred --------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccCCCCC
Q 019093 146 --------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQGGLRP 215 (346)
Q Consensus 146 --------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~~~~~ 215 (346)
...+|..++.+.+ .+|+.+|+|+||+|+|+++++++++.+| |.+|+||+|||||+||++++.. +++
T Consensus 197 ~~~~~~~~p~~~E~~~i~~~~--~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~--~~~ 272 (423)
T PRK09357 197 ARLGLPGIPAVAEEVMIARDV--LLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT--YDP 272 (423)
T ss_pred HHhCCCCCCHHHHHHHHHHHH--HHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC--cCC
Confidence 1357999999999 8999999999999999999999999987 7899999999999999999864 468
Q ss_pred ceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCC--CCCccchhHHHHHHHHHHHh--cCCHHHHHH
Q 019093 216 HNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACG--CAGIYNAPVALSLYAKVFEE--MGALDKLEA 291 (346)
Q Consensus 216 ~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~--~~G~~g~e~~lp~l~~~~~~--~~~l~~lv~ 291 (346)
.+||+||||+++++++||++|++|.||+ +||||+||+.++|..+|. .+|++|+|+.+|++++.++. ..+++++++
T Consensus 273 ~~k~~Pplr~~~~~~~l~~~l~~G~~~~-i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~ 351 (423)
T PRK09357 273 NYKVNPPLRTEEDREALIEGLKDGTIDA-IATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLE 351 (423)
T ss_pred ceEECCCCCCHHHHHHHHHHHHcCCCeE-EecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 8999999999999999999999999999 999999999999875554 36999999999999875443 358999999
Q ss_pred HHchhhhhhcCCCCC------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEE
Q 019093 292 FTSFNGPDFYGLPRN------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSL 345 (346)
Q Consensus 292 ~~s~nPAki~gl~~k------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~ 345 (346)
++|.|||++||++.+ +|||+|+| .+|+++++.++++++|||| +|++++|+|.+
T Consensus 352 ~~t~~~A~~~g~~~G~i~~G~~AD~~i~d~~~~~~v~~~~~~~~~~~~p~-~g~~~~g~v~~ 412 (423)
T PRK09357 352 KMTINPARILGLPAGPLAEGEPADLVIFDPEAEWTVDGEDFASKGKNTPF-IGMKLKGKVVY 412 (423)
T ss_pred HHhHHHHHHhCCCCCccCCCCcCCEEEEcCCCCEEEchhhcccCCCCCCC-cCCEEeeEEEE
Confidence 999999999999532 89999999 7899999999999999999 79999999975
No 31
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=1.8e-58 Score=459.03 Aligned_cols=333 Identities=17% Similarity=0.146 Sum_probs=272.3
Q ss_pred eEEecCccccceecCC-C--ccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-G--DLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g--~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
.+||||+||+|+|++. . ...+|++.+++ |||||+++||++.|+....+.++....++..... +||+++..
T Consensus 47 ~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~ 124 (447)
T cd01314 47 KYVLPGGIDPHTHLELPFMGTVTADDFESGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSV--IDYGFHMI 124 (447)
T ss_pred CEEecCEEeccccccccccCccCcchHHHHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCc--ccEEEEEe
Confidence 4799999999999987 3 35678887653 9999999999988877777777776655443332 78888766
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------- 144 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~--------- 144 (346)
.........+++.++.+.| +.++|+|+++. .....+. +.+.++++++++.|.++.+|||+...+.
T Consensus 125 ~~~~~~~~~~~~~~l~~~g-~~~ik~~~~~~----~~~~~s~-~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~ 198 (447)
T cd01314 125 ITDWTDSVIEELPELVKKG-ISSFKVFMAYK----GLLMVDD-EELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQ 198 (447)
T ss_pred ecCCChHHHHHHHHHHHcC-CCEEEEEeccC----CCCCCCH-HHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHc
Confidence 4111111345777777778 68999998542 1122244 7899999999999999999999865421
Q ss_pred C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093 145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG 211 (346)
Q Consensus 145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~ 211 (346)
+ +..+|..++.+++ .+++++|+|+||+|+|+++++++|+.+| |.+|+||+|||||+|+++++.+.
T Consensus 199 g~~~~~~~~~~~p~~~e~~~v~~~~--~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~ 276 (447)
T cd01314 199 GKTGPEYHALSRPPEVEAEATARAI--RLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKD 276 (447)
T ss_pred CCCChHHhhhcCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhccc
Confidence 1 1347888899988 7999999999999999999999999887 78999999999999999998421
Q ss_pred -CCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc---CCC--CCCccchhHHHHHHHHHHHhc--
Q 019093 212 -GLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC---ACG--CAGIYNAPVALSLYAKVFEEM-- 283 (346)
Q Consensus 212 -~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~---~~~--~~G~~g~e~~lp~l~~~~~~~-- 283 (346)
.+|+.+|||||||++++|++||+++++|.||+ |||||+||+.++|.. +|. ++|++|+|+++|++|+..+++
T Consensus 277 ~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~-igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~ 355 (447)
T cd01314 277 WFEGAKYVCSPPLRPKEDQEALWDGLSSGTLQT-VGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGR 355 (447)
T ss_pred cccccceEECCCCCChHHHHHHHHHHhCCCeeE-EECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCC
Confidence 24688999999999999999999999999999 999999999888853 343 359999999999999755443
Q ss_pred CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 284 GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 284 ~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
.+++++++++|.||||+||| +++ +|||+||| ++|+++.++++|+++|||| +|++++|+|.++
T Consensus 356 ~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~v~~t 427 (447)
T cd01314 356 ITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEKTISADTHHHNVDYNIF-EGMKVKGWPVVT 427 (447)
T ss_pred CCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCEEecHHHhhccCCCCcc-cCeEEeeeEEEE
Confidence 58999999999999999999 542 89999999 8999999999999999999 799999999763
No 32
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=2.8e-58 Score=459.02 Aligned_cols=333 Identities=17% Similarity=0.142 Sum_probs=273.2
Q ss_pred eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|+|++. +..++|++++++ |||||+++||++.|+.+..+.++.+.+.....+. +||++++.
T Consensus 45 ~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~ 122 (459)
T PRK08323 45 KYVMPGGIDPHTHMEMPFGGTVSSDDFETGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAV--IDYGFHMI 122 (459)
T ss_pred CEEeccEEeeeeccccccCCccccCcHHHHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCce--EEEEEEEE
Confidence 4799999999999986 245678887653 9999999999998877777777777665443333 89988766
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC---------
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV--------- 144 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~--------- 144 (346)
+...+....+++.++.+.| +.+||+|+++.. .... +. +.+.++++.+++.|.++.+|+|+.+.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~~---~~~~-s~-~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~ 196 (459)
T PRK08323 123 ITDWNEVVLDEMPELVEEG-ITSFKLFMAYKG---ALML-DD-DELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAE 196 (459)
T ss_pred ecCCcHHHHHHHHHHHHcC-CCEEEEEEecCC---CCCC-CH-HHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHc
Confidence 5211221245777777888 689999986421 1223 34 7899999999999999999999865421
Q ss_pred C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhccC
Q 019093 145 D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQG 211 (346)
Q Consensus 145 ~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~~ 211 (346)
+ +..+|..++.+++ .+++.+|+|+||+|+|+++++++|+.+| |.+||||+|||||+|++++++..
T Consensus 197 g~~~~~~~~~~~p~~~e~~~v~~~~--~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~ 274 (459)
T PRK08323 197 GKTGPEYHALSRPPEVEGEATNRAI--MLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGP 274 (459)
T ss_pred CCCChhhhhccCCHHHHHHHHHHHH--HHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCC
Confidence 1 2356888999999 8999999999999999999999999887 78999999999999999998643
Q ss_pred C--CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccccc----CC--CCCCccchhHHHHHHHHHHHh-
Q 019093 212 G--LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKEC----AC--GCAGIYNAPVALSLYAKVFEE- 282 (346)
Q Consensus 212 ~--~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~----~~--~~~G~~g~e~~lp~l~~~~~~- 282 (346)
+ +|..+|+|||||+++|+++||++|++|.||+ |+|||+||+.++|.. +| .++|++|+|+.+|++++..+.
T Consensus 275 ~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~-i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~ 353 (459)
T PRK08323 275 DWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQV-VATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMT 353 (459)
T ss_pred ccccccceEECCCCCChHHHHHHHHHhhcCCeeE-EECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHc
Confidence 2 3688999999999999999999999999999 999999999888753 33 245999999999999854333
Q ss_pred -cCCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 283 -MGALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 283 -~~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
..+++++++++|.||||+||| +++ +|||+||| ++|+|+.++++|+++|||| +|++++|+|.++
T Consensus 354 ~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~~~v~~~~~~s~~~~s~~-~g~~~~g~v~~v 427 (459)
T PRK08323 354 GRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNATKTISASTLHSNVDYNPY-EGFEVTGWPVTT 427 (459)
T ss_pred CCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcccccCHHHHhhcCCCCcc-cCcEEeeeEEEE
Confidence 358999999999999999999 442 89999999 8899999999999999999 799999998763
No 33
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=4.8e-58 Score=456.56 Aligned_cols=333 Identities=19% Similarity=0.172 Sum_probs=268.8
Q ss_pred eEEecCccccceecCC---CccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD---GDLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~---g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++||||+||+|+|++. +..++|++.+++ |||||+++||++.|+.+..+.++...+.....+. +||+++..
T Consensus 47 ~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 124 (454)
T TIGR02033 47 KYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSV--IDYGFHMM 124 (454)
T ss_pred CEEecCEecceeccCcccCCCCCcchHHHHHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCce--EEEEEEec
Confidence 4799999999999986 256678886654 9999999999998877778877777665433332 78887765
Q ss_pred EEeCCCCCHHH-HHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCC--------
Q 019093 74 LYLTDTTSPDE-IKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIV-------- 144 (346)
Q Consensus 74 ~~~~~~~~~~e-l~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~-------- 144 (346)
.........++ +..+.+.| +.++|+|+++. ....+ +. +.++++++++++.|.++.+|+|+.....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~g-~~~ik~~~~~~---~~~~~-~~-~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~ 198 (454)
T TIGR02033 125 ITHWNDEVLEEHIPELVEEG-ITSFKVFMAYK---NLLMV-DD-EELFEILKRAKELGALLQVHAENGDVIAELQARLLA 198 (454)
T ss_pred ccCCcHHHHHHHHHHHHhcC-CcEEEEEeecC---CCCCC-CH-HHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHH
Confidence 31111111334 44555677 68999998542 11223 44 7899999999999999999999865321
Q ss_pred -C-----------hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC--CCeeEEEccchhhccchhhhcc
Q 019093 145 -D-----------IFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNALFQ 210 (346)
Q Consensus 145 -~-----------~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~~~ 210 (346)
+ +..+|..++.+.+ .+++++|+|+||+|+|++++++.|+.+| |.+|+||+|||||+||.+++..
T Consensus 199 ~G~~~~~~~~~~~p~~~e~~~v~~~~--~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~ 276 (454)
T TIGR02033 199 QGKTGPEYHALSRPPESEAEAVARAI--ALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDK 276 (454)
T ss_pred cCCCChhHhhhcCCHHHHHHHHHHHH--HHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcC
Confidence 1 1346788898888 7999999999999999999999998776 7899999999999999999863
Q ss_pred CC-CCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCcccc----ccCCC--CCCccchhHHHHHHHHHHHhc
Q 019093 211 GG-LRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK----ECACG--CAGIYNAPVALSLYAKVFEEM 283 (346)
Q Consensus 211 ~~-~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K----~~~~~--~~G~~g~e~~lp~l~~~~~~~ 283 (346)
.+ .++.+|||||||+++||++||++|.+|.||+ |||||+||+.++| ..+|. .+|++|+|+.+|++|+.++++
T Consensus 277 ~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~-igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~ 355 (454)
T TIGR02033 277 PGFEGAKYVCSPPLREKEDQDALWSALSSGALQT-VGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVAT 355 (454)
T ss_pred cccccceeEECCCCCChhhHHHHHHHhhcCCeEE-EECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHc
Confidence 21 3578999999999999999999999999999 9999999998887 23443 359999999999999765543
Q ss_pred --CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe--cceeecCCccccCCcccccCCCcEEEEEEEEC
Q 019093 284 --GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK--IPWKVPEAFSFSFGDIIPMFAGNTLEWQPSLI 346 (346)
Q Consensus 284 --~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d--~~~~v~~~~~~s~~~~sp~~~G~~l~G~v~~~ 346 (346)
.+++++++++|.||||+||| +++ +|||+||| .+|+++.++++|+++|||| +|++++|+|.++
T Consensus 356 ~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~~~~~~~~~~~~~~~p~-~g~~~~g~v~~t 429 (454)
T TIGR02033 356 GRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTTVISAETHHDNADYNPF-EGFKVQGAVVSV 429 (454)
T ss_pred CCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCeeechHHhhccCCCCcc-cCeEEeeeEEEE
Confidence 48999999999999999999 442 89999999 8999999999999999999 699999999764
No 34
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.1e-51 Score=369.26 Aligned_cols=342 Identities=63% Similarity=1.047 Sum_probs=313.7
Q ss_pred CeEEecCccccceecCCCccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093 1 MELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT 80 (346)
Q Consensus 1 ~~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~ 80 (346)
|++.+....|.|+|+|+|..-+......+.++...+.|||..||+++.+...+|++|+.++.+..-+|.+.|+++++++.
T Consensus 3 ~~l~i~rPdDwHlHLRdg~mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlYLtd~~ 82 (344)
T COG0418 3 QELTIRRPDDWHLHLRDGAMLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLYLTDST 82 (344)
T ss_pred eeeeccCccceeEEecCccHHHHhhhhhhhhcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEEecCCC
Confidence 57889999999999999888777776667899999999999999999999999999998876644689999999999888
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
.++|+.+..+.|.|.++|+||++.++||+.|+.|. +.++.+|+.+++.|++++||.|-.+...++.++|+..+.+++++
T Consensus 83 ~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~-~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~p 161 (344)
T COG0418 83 TPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDI-EKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEP 161 (344)
T ss_pred CHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcH-HHHHHHHHHHHHcCCeEEEecccCCccccchhhHHHHHHHHHHH
Confidence 99999999999989999999999999999999987 89999999999999999999998877778889999999999988
Q ss_pred HHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCC
Q 019093 161 LIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGS 240 (346)
Q Consensus 161 ~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~ 240 (346)
...+++..|+.+.|++|+++++.|+++. .++.+.+|||||++|.+++..+|..+.+.|-|=++.++||+||.++..+|.
T Consensus 162 l~~~fP~LKIV~EHiTT~dav~~v~~~~-~nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~ 240 (344)
T COG0418 162 LRQRFPKLKIVLEHITTKDAVEYVKDAN-NNLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGH 240 (344)
T ss_pred HHhhCCcceEEEEEeccHHHHHHHHhcC-cceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCC
Confidence 8889999999999999999999999874 569999999999999999987666799999999999999999999999999
Q ss_pred ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCCCCccEEEEecceeec
Q 019093 241 RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPRNTSKIKLTKIPWKVP 320 (346)
Q Consensus 241 Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~kdAdlvi~d~~~~v~ 320 (346)
-.+|+|||.|||....|+..++.+|+.+....+|++.+++++.+.|+.|-.++|.|..++||||..+.-++++.++|.|.
T Consensus 241 ~kfFlGtDSAPH~~~~Ke~~cgcAG~fsap~al~~~AevFE~~naL~~LeaF~S~nGp~fY~lp~n~~~itL~k~~~~vP 320 (344)
T COG0418 241 PKFFLGTDSAPHARSRKESACGCAGIFSAPFALPLYAEVFEEENALDNLEAFASDNGPKFYGLPRNDKTITLVKEEWQVP 320 (344)
T ss_pred CcEEecCCCCCCcccccccccccccccccHhHHHHHHHHHHHhcHHHHHHHHHhhcCcceecccCCCceEEEEecccccc
Confidence 99999999999999999887888999999999999999999999999999999999999999987677788999999998
Q ss_pred CCccccCCcccccCCCcEEEEEEE
Q 019093 321 EAFSFSFGDIIPMFAGNTLEWQPS 344 (346)
Q Consensus 321 ~~~~~s~~~~sp~~~G~~l~G~v~ 344 (346)
++--.......||..|.+++|.+.
T Consensus 321 ~~i~~g~~~vvpf~aGe~L~W~v~ 344 (344)
T COG0418 321 ESIPFGDDIVVPFRAGETLSWSVK 344 (344)
T ss_pred ceeccCCCceEEecCCCeeeeeeC
Confidence 876666667899999999999873
No 35
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=100.00 E-value=7.7e-43 Score=306.09 Aligned_cols=337 Identities=66% Similarity=1.059 Sum_probs=292.0
Q ss_pred CeEEecCccccceecCCCccccccc-cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCC
Q 019093 1 MELTLTQPDDWHLHLRDGDLLKAVV-PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDT 79 (346)
Q Consensus 1 ~~~vlPG~ID~HvH~r~g~~~ke~~-~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~ 79 (346)
|++-+|+.-|+|||+|+|.+-+.-. .+.+||+.....|||..||+++.++.-.|++.+.+-.. .-.+.+++++++.
T Consensus 3 mel~i~~~~DmHvHlR~g~ml~aVvP~~a~ggvs~AyvMPNL~PPiTt~da~i~YkK~i~kL~s---kttfLMslYLs~~ 79 (344)
T KOG2902|consen 3 MELTITQPDDMHVHLRDGDMLHAVVPHSASGGVSRAYVMPNLKPPITTTDAAIIYKKFIMKLPS---KTTFLMSLYLSDK 79 (344)
T ss_pred eEEecCCccceeEEeccCCeeeeeccccccCceeEEEEcCCCCCCcchHHHHHHHHHHHHhcCc---cceeEEEEeecCC
Confidence 7899999999999999976665433 34679999999999999999998876667766655332 2344778888887
Q ss_pred CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-hhhhHHHHHHHHH
Q 019093 80 TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-IFDREKVFIDTIL 158 (346)
Q Consensus 80 ~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-~~~~E~~av~~~l 158 (346)
..+++|.+..+.|+|.|+|+|+++.++++..|++++++..|.+|+.+++.|+++-+|-|-+..+.+ ...+|...+-.++
T Consensus 80 ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~Vf~aE~~Flptll 159 (344)
T KOG2902|consen 80 TTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHVFDAEKIFLPTLL 159 (344)
T ss_pred CCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCCceecchhhhHHHHH
Confidence 788999999999889999999999999999999885589999999999999999999997654433 4678888887777
Q ss_pred HHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHc
Q 019093 159 QPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTS 238 (346)
Q Consensus 159 ~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~ 238 (346)
. ...++++.++.+.|++|.++++.++.+++..|-+.+++|||+|+.+++.. ++...|.|-.+.+.||+||.+|..+
T Consensus 160 ~-LhqrfP~LKivlEHcTt~dAv~~ve~a~~~sVaaTvTahHL~Lt~~dwqg---~P~nfCkPVaK~e~dr~AlvkAatS 235 (344)
T KOG2902|consen 160 Q-LHQRFPQLKIVLEHCTTMDAVNFVESAKEGSVAATVTAHHLLLTRNDWQG---QPHNFCKPVAKREIDREALVKAATS 235 (344)
T ss_pred H-HHHhCccceeHHHhcccHHHHHHHHhhcCCceeeEeehheeEEehhhhcC---CCcccccccccCcccHHHHHHHHhc
Confidence 5 67899999999999999999999999998889999999999999999863 4889999999999999999999999
Q ss_pred CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC--CCCccEEEEecc
Q 019093 239 GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP--RNTSKIKLTKIP 316 (346)
Q Consensus 239 G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~--~kdAdlvi~d~~ 316 (346)
|.--+|+|||.|||.+..|....+.+|+.+..+.+|++.+++.+.+.|+.|-.+.|.+.-++||+| ++..+|++-+++
T Consensus 236 g~pkFFfGsDSAPHprs~K~~~~~cAGvysqpfA~sy~A~VFde~gaLd~Lk~F~s~fG~~FY~~p~e~~sS~I~lKKe~ 315 (344)
T KOG2902|consen 236 GSPKFFFGSDSAPHPRSRKESSCGCAGVYSQPFALSYYAKVFDEAGALDKLKAFTSFFGPDFYGLPDERNSSKITLKKEP 315 (344)
T ss_pred CCCceeecCCCCCCcccccccCCCcceeecccchHHHHHHHHhhhchHHHHhhhHhhcCcceecccccccccceeeecCc
Confidence 999999999999999999987667789999999999999999999999999999999999999996 445676666699
Q ss_pred eeecCCccccCCcccccCCCcEEEEEEE
Q 019093 317 WKVPEAFSFSFGDIIPMFAGNTLEWQPS 344 (346)
Q Consensus 317 ~~v~~~~~~s~~~~sp~~~G~~l~G~v~ 344 (346)
|+|++-.-..+....||..|.+|+|.+.
T Consensus 316 ~~vP~v~~~~~~~ivPf~age~LqW~~~ 343 (344)
T KOG2902|consen 316 WKVPDVFNFPFGEIVPFFAGETLQWQPL 343 (344)
T ss_pred ccCcchhcCCCCceeeecCCCeeeeeeC
Confidence 9998766566778889889999999874
No 36
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=8.6e-41 Score=336.24 Aligned_cols=305 Identities=10% Similarity=0.025 Sum_probs=228.9
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeC-CCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE----
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM-PNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY---- 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m-Pnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~---- 75 (346)
++|+||+||+|+|+++ +. .-....|||||+++| +++.|. . .+.+...+.. ..+||+++++..
T Consensus 67 ~~v~PG~ID~H~H~~~~~~----~~~~~~~GvTtvv~~~~~~~p~---~----~~~~~~~~~~-~~vn~~~~~~~~~~R~ 134 (509)
T PRK09061 67 LVVAPGFIDLHAHGQSVAA----YRMQAFDGVTTALELEAGVLPV---A----RWYAEQAGEG-RPLNYGASVGWTPARI 134 (509)
T ss_pred CEEecCeEeeeeCCCCCcc----chhhccCCceeEEeeccCCCCH---H----HHHHHHHhcC-CcceeehhcCcHHHHH
Confidence 4799999999999876 31 223346999999999 444432 1 2222222222 127898877652
Q ss_pred -eCCC------------------C-----CHHH---HHHHHH----cCCeeEEEEeecCCccCCCCCccChHHHHHHHHH
Q 019093 76 -LTDT------------------T-----SPDE---IKLARK----TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLE 124 (346)
Q Consensus 76 -~~~~------------------~-----~~~e---l~~l~~----~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~ 124 (346)
+..+ . ..+| |.++.+ +| +.+||.++.|. ... +. +.++++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~G-a~gis~~~~y~-----p~~-~~-~eL~~l~~ 206 (509)
T PRK09061 135 AVLTGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEG-ALGIGIGAGYA-----PGT-GH-KEYLELAR 206 (509)
T ss_pred HHhCCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCC-CCEEecCCccC-----CCC-CH-HHHHHHHH
Confidence 0010 0 1234 555543 78 68999876431 122 44 78999999
Q ss_pred HhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC------HHHHHHHHccC--CCeeEEEc
Q 019093 125 EMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT------MDAVKFVESCK--EGFVAATV 196 (346)
Q Consensus 125 ~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt------~~~l~~i~~ak--g~~vt~Et 196 (346)
.++++|.++.+|+|+.++.. ..+|.+++.+++ .+++.+|+|+||+|+|+ ++++++|+++| |.+||||+
T Consensus 207 ~A~~~g~~v~~H~e~~~~~~--~~~e~~av~~~i--~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~ 282 (509)
T PRK09061 207 LAARAGVPTYTHVRYLSNVD--PRSSVDAYQELI--AAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEA 282 (509)
T ss_pred HHHHcCCEEEEEecCcccCC--chhHHHHHHHHH--HHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEe
Confidence 99999999999999976421 246778899999 89999999999999999 99999999998 89999999
Q ss_pred cchh--------hccchhhhccCCCCCce---EE---eCCCCC-------------------------hhhHHHHHHHHH
Q 019093 197 TPQH--------LVLNRNALFQGGLRPHN---YC---LPVLKR-------------------------EIHRQAVVSAVT 237 (346)
Q Consensus 197 ~ph~--------L~l~~~~~~~~~~~~~~---k~---~PPLR~-------------------------~~d~~aL~~al~ 237 (346)
|||| |+|+++...+ ++..+ ++ +||||+ ++++++||+++.
T Consensus 283 ~P~~~~~t~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 360 (509)
T PRK09061 283 YPYGAGSTVVGAAFFDPGWLER--MGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVL 360 (509)
T ss_pred cCcchhhhhhcccccCHHHHHH--hCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhC
Confidence 9999 9997777654 34555 88 999999 678999999999
Q ss_pred cCCccEEeecCCCCCCccccccCCCC--CCccchh------HHHHHHHHHHHh-c--CCHHHHHHHHchhhhhhcC----
Q 019093 238 SGSRKFFLGTDSAPHERGRKECACGC--AGIYNAP------VALSLYAKVFEE-M--GALDKLEAFTSFNGPDFYG---- 302 (346)
Q Consensus 238 ~G~Id~~i~SDHaP~~~~~K~~~~~~--~G~~g~e------~~lp~l~~~~~~-~--~~l~~lv~~~s~nPAki~g---- 302 (346)
+|.| + |+|||+||+.++|...|.. .|+.|.+ ..+|.+++.+++ + .+++++++++|.|||++||
T Consensus 361 ~p~~-~-i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~lg~~~~ 438 (509)
T PRK09061 361 FPGA-A-IASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQILEDSVP 438 (509)
T ss_pred CCCc-e-EecCCccccccccccccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhccccc
Confidence 9999 8 9999999999999766654 4777777 788888775444 2 4899999999999999999
Q ss_pred -CC-CC------CccEEEEe-cceeecCCccccCCcccccCCCcE
Q 019093 303 -LP-RN------TSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNT 338 (346)
Q Consensus 303 -l~-~k------dAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~ 338 (346)
++ ++ +|||+||| .. ..+...+++. ++|| +|.+
T Consensus 439 ~l~~~G~i~~G~~ADlvv~D~~~-~~~~~~~~~~--~~~~-~gi~ 479 (509)
T PRK09061 439 AMRRKGRLQAGADADIVVFDPET-ITDRATFEDP--NRPS-EGVR 479 (509)
T ss_pred cccCCEeeCCCCCcCEEEEchhh-cccccccccc--CCCC-CCce
Confidence 74 32 89999999 44 4444445443 6788 5743
No 37
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=8.9e-38 Score=307.88 Aligned_cols=261 Identities=15% Similarity=0.094 Sum_probs=191.8
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeCCC-CCCCCCcH------------------------HHHHHHH
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVMPN-LKPPITTT------------------------AAAVAYR 55 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~mPn-t~p~~~~~------------------------~~~~~~~ 55 (346)
++|+||+||+|+|++. +.....+-....||+||+++||+ +.|+.++. +.++.++
T Consensus 49 ~~v~PG~iD~H~H~~~~~~~~~~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (415)
T cd01297 49 LVVAPGFIDVHTHYDGQVFWDPDLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYL 128 (415)
T ss_pred CEEccCEeeeeecCCcccccCcchhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHH
Confidence 4899999999999987 43322222234599999999998 55665544 4556677
Q ss_pred HHHHhhCCCCccEE---EEEEEEe-C------CC--CCHHHHHHHH----HcCCeeEEEEeecCCccCCCCCccChHHHH
Q 019093 56 ESILKALPASSNFT---PLMTLYL-T------DT--TSPDEIKLAR----KTGVVFAVKLYPAGATTNSQDGVTDLFGKC 119 (346)
Q Consensus 56 ~~~~~~~~~~vd~~---~~~~~~~-~------~~--~~~~el~~l~----~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l 119 (346)
+.+++.. ..+||. +|+++.. . +. ...++|.+|. ++| +.|||.++.|.. .... +. +.+
T Consensus 129 ~~~~~~~-~~~~~~~~~~h~~l~~~~~g~~~~~~~~~~~~~~~~l~~~al~~G-a~g~~~~~~y~~---~~~~-~~-~~l 201 (415)
T cd01297 129 DALEARP-PAVNVAALVGHAALRRAVMGLDAREATEEELAKMRELLREALEAG-ALGISTGLAYAP---RLYA-GT-AEL 201 (415)
T ss_pred HHHHhcC-CCcCeeeccCcHHHHHHHhCcCCCCCCHHHHHHHHHHHHHHHHCC-CeEEEcccccCC---cccC-CH-HHH
Confidence 7664432 138998 7766521 0 00 1244566664 568 789999885521 1123 44 899
Q ss_pred HHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH---------HHHHHccC--
Q 019093 120 VHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA---------VKFVESCK-- 188 (346)
Q Consensus 120 ~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~---------l~~i~~ak-- 188 (346)
+++|+.+++.|.++.+|||+.+ .+|.+++.+++ .+++.+|+|+||+|+|+.++ +++|+++|
T Consensus 202 ~~~~~~a~~~g~~v~~H~e~~~------~~e~~av~~~~--~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~ 273 (415)
T cd01297 202 VALARVAARYGGVYQTHVRYEG------DSILEALDELL--RLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAE 273 (415)
T ss_pred HHHHHHHHHcCCEEEEEECccc------ccHHHHHHHHH--HHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHh
Confidence 9999999999999999999875 47888999999 89999999999999999999 99999988
Q ss_pred CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093 189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 268 (346)
Q Consensus 189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g 268 (346)
|.+|++||||||+.+ .++ |+++.++.+++ |+|||+|+. |. .+...|
T Consensus 274 G~~v~~e~~p~~~~~----------------------~~~----~~~l~~~~~~~-i~SDh~~~~---~~----~~~~~~ 319 (415)
T cd01297 274 GLQVTADVYPYGAGS----------------------EDD----VRRIMAHPVVM-GGSDGGALG---KP----HPRSYG 319 (415)
T ss_pred CCcEEEEeCCCCCCc----------------------HHH----HHHHHcCCCce-eeeCCCcCC---CC----CcchhC
Confidence 799999999998876 233 34444448999 999999985 21 111222
Q ss_pred hhHHHHHHHHHHH-hc--CCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe
Q 019093 269 APVALSLYAKVFE-EM--GALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK 314 (346)
Q Consensus 269 ~e~~lp~l~~~~~-~~--~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d 314 (346)
. +|+++...+ ++ .+++++++++|.||||+||++ ++ +|||+|||
T Consensus 320 ~---~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~~gl~~~G~l~~G~~ADlvv~d 372 (415)
T cd01297 320 D---FTRVLGHYVRERKLLSLEEAVRKMTGLPARVFGLADRGRIAPGYRADIVVFD 372 (415)
T ss_pred C---HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEEc
Confidence 2 777765332 32 589999999999999999995 32 89999999
No 38
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.97 E-value=4.1e-30 Score=249.99 Aligned_cols=271 Identities=11% Similarity=0.007 Sum_probs=187.3
Q ss_pred eEEecCccccceecCC-Cc-----ccc---cccccc-----CCceeEEEeCC-CC--CCCCCcHHHHHHHH---HHHHhh
Q 019093 2 ELTLTQPDDWHLHLRD-GD-----LLK---AVVPHS-----VSHYGRAIVMP-NL--KPPITTTAAAVAYR---ESILKA 61 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~-----~~k---e~~~s~-----sGGvTtvv~mP-nt--~p~~~~~~~~~~~~---~~~~~~ 61 (346)
++|+||+||+|+|+.+ .. ..+ +.|.++ +|||||+++|| +. .|+..+.+.++.+. +.++..
T Consensus 44 ~~v~PGlID~H~h~~e~~~~prp~~~~~~~~~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (376)
T TIGR02318 44 DLLLPGLIDLHTDNLERHMSPRPGVDWPIDAAIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDR 123 (376)
T ss_pred CEEeccEEEcccCccccCcCCCCCCCcchHHHHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhc
Confidence 5899999999999876 11 123 556554 39999999999 43 57777888888888 433322
Q ss_pred CCCCccEEEEEEEEe-CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093 62 LPASSNFTPLMTLYL-TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT 140 (346)
Q Consensus 62 ~~~~vd~~~~~~~~~-~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~ 140 (346)
....+||.+|+.+.. .+ .+.+++..+.+.| +.+||.||... .+.+...+. ..+++.+.. +.| ++|||+.
T Consensus 124 ~~~~~d~~~h~~~e~~~~-~~~~~l~~~~~~g-~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~--~~g---~~~~e~~ 193 (376)
T TIGR02318 124 GLLRADHRLHLRCELPNE-EVLPELEELIDDP-RVDLISLMDHT--PGQRQFRDL-EKYREYYRG--KRG---LSDDEFD 193 (376)
T ss_pred CchhhhceeEEEEEecCc-cHHHHHHHHhcCC-CcCEEEEeCCC--CCcccccCH-HHHHHHHHh--hcC---CCHHHHH
Confidence 112289999999742 34 3678999998889 88999999752 233334454 566666644 566 7799997
Q ss_pred CCCCChh----hhHHHHHHHHHHHHHHhCCCCcEEEEcc-CCHHHHHHHHccCCC-----eeEEEccchhhccchhhhcc
Q 019093 141 DPIVDIF----DREKVFIDTILQPLIQRLPQLKVVMEHI-TTMDAVKFVESCKEG-----FVAATVTPQHLVLNRNALFQ 210 (346)
Q Consensus 141 ~~~~~~~----~~E~~av~~~l~~~la~~~g~~lhi~Hv-St~~~l~~i~~akg~-----~vt~Et~ph~L~l~~~~~~~ 210 (346)
+++.... ....+++.+++ .+|+..|+|+ ..|. .+.+.++..++. |. +++.|+ .+....
T Consensus 194 ~~~~~~~~~~~~~~~e~i~~~v--~~A~~~G~~v-~sH~~~~~e~i~~a~~~-Gv~~~E~~~t~e~--------a~~~~~ 261 (376)
T TIGR02318 194 EIVEERIARRAEYGLANRSEIA--ALARARGIPL-ASHDDDTPEHVAEAHDL-GVTISEFPTTLEA--------AKEARS 261 (376)
T ss_pred HHHHHHHHHHhhccHHHHHHHH--HHHHHCCCeE-EEecCCCHHHHHHHHHC-CCChhccCCCHHH--------HHHHHH
Confidence 7532110 01135677777 7899999997 7888 466665554443 54 333333 112222
Q ss_pred CCCCCc-eEEeC-CCCChhh--HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh--cC
Q 019093 211 GGLRPH-NYCLP-VLKREIH--RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE--MG 284 (346)
Q Consensus 211 ~~~~~~-~k~~P-PLR~~~d--~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~--~~ 284 (346)
.|.. .++.| |+|...+ +.++|+++.+|.+|+ ++|||.|++ .++.++..... ..
T Consensus 262 --~G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~-l~SD~~p~~------------------~l~~~~~~~~~~~gl 320 (376)
T TIGR02318 262 --LGMQILMGAPNIVRGGSHSGNLSARELAHEGLLDV-LASDYVPAS------------------LLLAAFQLADDVEGI 320 (376)
T ss_pred --cCCeEEECCccccccccccchHHHHHHHHCCCcEE-EEcCCCcHH------------------HHHHHHHHHHhhcCC
Confidence 2344 66778 8998776 889999999999999 999998841 24444443332 34
Q ss_pred CHHHHHHHHchhhhhhcCCCC-C------CccEEEEec
Q 019093 285 ALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTKI 315 (346)
Q Consensus 285 ~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d~ 315 (346)
+++++++++|.|||+++|++. + +|||+++|.
T Consensus 321 ~~~~al~~~T~npA~~lgl~~~G~I~~G~~ADlvvvd~ 358 (376)
T TIGR02318 321 PLPQAVKMVTKNPARAVGLSDRGSIAPGKRADLVRVHR 358 (376)
T ss_pred CHHHHHHHHhHHHHHHcCCCCCCcCCCCCcccEEEEcC
Confidence 899999999999999999953 2 899999994
No 39
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.96 E-value=2.4e-29 Score=245.28 Aligned_cols=274 Identities=12% Similarity=-0.004 Sum_probs=179.2
Q ss_pred eEEecCccccceecCC-----C-c---cccccccccC-----CceeEEEeCC-CCC-CC-----CCcHHHHHHHHHHHHh
Q 019093 2 ELTLTQPDDWHLHLRD-----G-D---LLKAVVPHSV-----SHYGRAIVMP-NLK-PP-----ITTTAAAVAYRESILK 60 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-----g-~---~~ke~~~s~s-----GGvTtvv~mP-nt~-p~-----~~~~~~~~~~~~~~~~ 60 (346)
++||||+||.|+|.-+ + . ..+++|.+++ ||+||++||+ ++. |+ .+..+.+..+.+....
T Consensus 48 ~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (383)
T PRK15446 48 DYLLPGLVDLHTDNLEKHLAPRPGVDWPADAALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARA 127 (383)
T ss_pred CEEEeCeEEcccCCcccccCCCCCCccchHHHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhh
Confidence 5899999999995432 1 1 2237787764 9999999985 543 42 2222234445542111
Q ss_pred hCCCCccEEEEEEEEe-CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093 61 ALPASSNFTPLMTLYL-TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV 139 (346)
Q Consensus 61 ~~~~~vd~~~~~~~~~-~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~ 139 (346)
...+.|||++|+.+.. ++ ...+||.++.+.| +++||+||.......+ ..+. .. ++.+. .++.| ++|||+
T Consensus 128 ~~~~~vD~~~h~~~~~~~~-~~~~~l~~~~~~g-~~~~k~fm~~~p~~~~--~~~~-~~-~~~~~-~~~~g---~~~~e~ 197 (383)
T PRK15446 128 RGLLRADHRLHLRCELTNP-DALELFEALLAHP-RVDLVSLMDHTPGQRQ--FRDL-EK-YREYY-AGKYG---LSDEEF 197 (383)
T ss_pred cCchhccceeEEEEEecCc-chHHHHHHHhcCC-CcCEEEEeCCCCcccc--ccCH-HH-HHHHH-HhhcC---CCHHHH
Confidence 1222399999999843 33 3578999999889 8999999975211111 2232 33 44454 55777 679999
Q ss_pred CCCCCC----hhhhHHHHHHHHHHHHHHhCCCCcEEEEcc-CCHHHHHHHHccCCCeeEEEccchhhccchhhh---ccC
Q 019093 140 TDPIVD----IFDREKVFIDTILQPLIQRLPQLKVVMEHI-TTMDAVKFVESCKEGFVAATVTPQHLVLNRNAL---FQG 211 (346)
Q Consensus 140 ~~~~~~----~~~~E~~av~~~l~~~la~~~g~~lhi~Hv-St~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~---~~~ 211 (346)
.+++.. ....|.+++++++ .+|+..|+++ ..|. .+.+.++..++. |+.++ | | ..+.+.+ .+.
T Consensus 198 ~~~~~~~~~~~~~~~~e~i~~~v--~~A~~~g~~v-~sH~~~~~~~i~~a~~~-Gv~~~-e---~--~~~~e~~~~~~~~ 267 (383)
T PRK15446 198 DAFVEERIALSARYAPPNRRAIA--ALARARGIPL-ASHDDDTPEHVAEAHAL-GVAIA-E---F--PTTLEAARAARAL 267 (383)
T ss_pred HHHHHHHHHhHhhcCHHHHHHHH--HHHHHCCCce-eecCCCCHHHHHHHHHc-CCcee-e---C--CCcHHHHHHHHHC
Confidence 876421 1234566788888 7999999998 7888 577766555543 66654 3 1 1222222 111
Q ss_pred CCCCceEEeC-CCCC--hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHH
Q 019093 212 GLRPHNYCLP-VLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALD 287 (346)
Q Consensus 212 ~~~~~~k~~P-PLR~--~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~ 287 (346)
| ....++.| |+|. ...+..+|+++..|.+++ ++|||.|++ .++.++..... ..+++
T Consensus 268 g-~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~-lgSD~~p~~------------------~~~~~~~~~~~~gls~~ 327 (383)
T PRK15446 268 G-MSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDI-LSSDYYPAS------------------LLDAAFRLADDGGLDLP 327 (383)
T ss_pred C-CEEEeCCcccccCCcccchHhHHHHHHCCCcEE-EEcCCChhh------------------HHHHHHHHHHhcCCCHH
Confidence 2 12333445 5776 567889999999999999 999998753 23333333333 35899
Q ss_pred HHHHHHchhhhhhcCCCC-C------CccEEEEec
Q 019093 288 KLEAFTSFNGPDFYGLPR-N------TSKIKLTKI 315 (346)
Q Consensus 288 ~lv~~~s~nPAki~gl~~-k------dAdlvi~d~ 315 (346)
+++++.+.|||+++|++. + +|||+|+|.
T Consensus 328 ~al~~~T~npA~~lgl~~~G~I~~G~~ADlvv~d~ 362 (383)
T PRK15446 328 QAVALVTANPARAAGLDDRGEIAPGKRADLVRVRR 362 (383)
T ss_pred HHHHHHhHHHHHHcCCCCCcCcCCCCcCCEEEEcC
Confidence 999999999999999943 2 899999993
No 40
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.88 E-value=2.5e-21 Score=189.17 Aligned_cols=165 Identities=13% Similarity=0.060 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCcEEEEcc--C-CHHHHHHHHccC---CCeeEEEccchhhccchhhhcc----CCCCC---
Q 019093 149 REKVFIDTILQPLIQRLPQLKVVMEHI--T-TMDAVKFVESCK---EGFVAATVTPQHLVLNRNALFQ----GGLRP--- 215 (346)
Q Consensus 149 ~E~~av~~~l~~~la~~~g~~lhi~Hv--S-t~~~l~~i~~ak---g~~vt~Et~ph~L~l~~~~~~~----~~~~~--- 215 (346)
.|..++.+.+ .+++..+++.|+.|+ + +..+++.+.+.+ |.+++ |+||||+.++.++++. ...|.
T Consensus 169 ~~~~~~~~~a--~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 245 (387)
T cd01308 169 EELARIAAEA--RVGGLLGGKAGIVHIHLGDGKRALSPIFELIEETEIPIT-QFLPTHINRTAPLFEQGVEFAKMGGTID 245 (387)
T ss_pred HHHHHHHHHH--HHHHHhcCCCcEEEEEeCCchHHHHHHHHHHHhcCCCcc-eeECCcccCCHHHHHHHHHHHHcCCcEE
Confidence 3444444444 334434555444443 3 336666664432 56677 7777777777664211 00011
Q ss_pred -ceEEeCCCCChh---hHHHHHHHHHcCCc-c--EEeecCCC---CCCccccccCCCCCCccchhHHHHHHHHHHHhc-C
Q 019093 216 -HNYCLPVLKREI---HRQAVVSAVTSGSR-K--FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEEM-G 284 (346)
Q Consensus 216 -~~k~~PPLR~~~---d~~aL~~al~~G~I-d--~~i~SDHa---P~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~ 284 (346)
...++||+|+.. +++.||.++++|.. | + ++|||+ |+..+++. ....|+++++++++.+....... .
T Consensus 246 i~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~d~i~-l~TD~~~~~p~~~~~g~--~~~~g~~~~~~~~~~~~~~v~~~~i 322 (387)
T cd01308 246 LTSSIDPQFRKEGEVRPSEALKRLLEQGVPLERIT-FSSDGNGSLPKFDENGN--LVGLGVGSVDTLLREVREAVKCGDI 322 (387)
T ss_pred EECCCCccccccCccChHHHHHHHHHhCCCCCcEE-EEECCCCCcccCccCCe--EEecCcCcHHHHHHHHHHHHHhCCC
Confidence 244556655432 46788899998863 2 6 899996 43322221 12358889999999887554444 5
Q ss_pred CHHHHHHHHchhhhhhcCCC-CC------CccEEEEecceee
Q 019093 285 ALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTKIPWKV 319 (346)
Q Consensus 285 ~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d~~~~v 319 (346)
++++++++++.|||++||++ .+ +|||+|||..+.+
T Consensus 323 ~~~~al~~~T~npA~~lg~~~~G~i~~G~~ADlvv~d~~~~~ 364 (387)
T cd01308 323 PLEVALRVITSNVARILKLRKKGEIQPGFDADLVILDKDLDI 364 (387)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEcCCCCE
Confidence 99999999999999999985 22 8999999944433
No 41
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.87 E-value=1.1e-20 Score=184.71 Aligned_cols=164 Identities=13% Similarity=0.042 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCc--EEEEccC-CHHHHHHHHcc-C--CCeeEEEccchhhccchhhh------ccCCCCCc
Q 019093 149 REKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESC-K--EGFVAATVTPQHLVLNRNAL------FQGGLRPH 216 (346)
Q Consensus 149 ~E~~av~~~l~~~la~~~g~~--lhi~HvS-t~~~l~~i~~a-k--g~~vt~Et~ph~L~l~~~~~------~~~~~~~~ 216 (346)
.|..++.+.. ..++..+++ .+++|++ ++.+++.++++ + |+.+++ +|+||+.++.+.. .+.|.-..
T Consensus 171 ~~l~~~~~~a--~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~~~~~~~~~~~G~~~~ 247 (388)
T PRK10657 171 EELARLAAEA--RVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPLFEQALEFAKKGGVID 247 (388)
T ss_pred HHHHHHHHHH--HHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHHHHHHHHHHHcCCeEE
Confidence 4444555555 344455543 8999999 79999998444 2 788885 9999999865541 22121011
Q ss_pred eE-EeCCCCChhh---HHHHHHHHHcCC-cc--EEeecCCCCCCcc--ccccCCCCCCccchhHHHHHHHHHHHh-cCCH
Q 019093 217 NY-CLPVLKREIH---RQAVVSAVTSGS-RK--FFLGTDSAPHERG--RKECACGCAGIYNAPVALSLYAKVFEE-MGAL 286 (346)
Q Consensus 217 ~k-~~PPLR~~~d---~~aL~~al~~G~-Id--~~i~SDHaP~~~~--~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l 286 (346)
+. ++||+|.+.+ .+.||+++++|. +| + ++|||++.... +|. .+...|.++++.+++.+...... ..++
T Consensus 248 v~~~~~~~~~~~~~~~~~~l~~~~~~G~~~d~v~-l~tD~~~~~~~~~~~g-~~~~~g~~~~~~l~~~~~~~~~~~gis~ 325 (388)
T PRK10657 248 LTTSDPDFLGEGEVAPAEALKRALEAGVPLSRVT-LSSDGNGSLPKFDEDG-NLVGLGVGSVESLLEEVRELVKDEGLPL 325 (388)
T ss_pred EecCCCcccccCccCHHHHHHHHHHcCCChhheE-EECCCCCCCceeccCC-CEeccCcCchhhHHHHHHHHHHhcCCCH
Confidence 24 8999998744 489999999997 88 7 89999654321 121 11234888999999988766544 4599
Q ss_pred HHHHHHHchhhhhhcCCCC-------CCccEEEEecce
Q 019093 287 DKLEAFTSFNGPDFYGLPR-------NTSKIKLTKIPW 317 (346)
Q Consensus 287 ~~lv~~~s~nPAki~gl~~-------kdAdlvi~d~~~ 317 (346)
++++++++.||||+||++. ++||+++||.++
T Consensus 326 ~~~l~~aT~npA~~lg~~~~G~l~~G~~AD~vv~~~~~ 363 (388)
T PRK10657 326 EDALKPLTSNVARFLKLNGKGEILPGKDADLLVLDDDL 363 (388)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCCCccCEEEECCCC
Confidence 9999999999999999842 289999999444
No 42
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.84 E-value=2.5e-19 Score=174.78 Aligned_cols=258 Identities=11% Similarity=0.042 Sum_probs=145.3
Q ss_pred eEEecCccccceecCC-Ccccc--ccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCC-CccEEEEEEEEe-
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLK--AVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPA-SSNFTPLMTLYL- 76 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~k--e~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~~- 76 (346)
.+|+||+||+|+|+.. |.... .+.....+|+||++||++.. ..+.+.+.......++.... .+++.+++....
T Consensus 52 ~~v~PGliD~H~H~~~~g~~~~~~~~~~~l~~G~Ttv~d~g~~~--~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~ 129 (379)
T PRK12394 52 CIVTPGLIDYHAHVFYDGTEGGVRPDMYMPPNGVTTVVDAGSAG--TANFDAFYRTVICASKVRIKAFLTVSPPGQTWSG 129 (379)
T ss_pred CEEECCEEEeeecCCCCCcccccCHHHHHHhCCccEEEECCCCC--cccHHHHHHHHhhhhcceeeeEEeeecccccccC
Confidence 4799999999999965 42221 11122349999999998543 23444444332212111010 134443321100
Q ss_pred -CC-----CCCHHHHHHHHHc--CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhh
Q 019093 77 -TD-----TTSPDEIKLARKT--GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD 148 (346)
Q Consensus 77 -~~-----~~~~~el~~l~~~--G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~ 148 (346)
.+ ....+++.++.+. ..+.++|+++.... .. ...+ +.+.+.++.++++|+++.+|+++...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ki~~~~~~--~~-~~~~--~~l~~~~~~A~~~g~~v~iH~~e~~~------ 198 (379)
T PRK12394 130 YQENYDPDNIDENKIHALFRQYRNVLQGLKLRVQTED--IA-EYGL--KPLTETLRIANDLRCPVAVHSTHPVL------ 198 (379)
T ss_pred cccccChhHCCHHHHHHHHHHCcCcEEEEEEEEeccc--cc-ccch--HHHHHHHHHHHHcCCCEEEEeCCCCc------
Confidence 00 0113566677542 33789999863211 01 1223 68999999999999999999998643
Q ss_pred hHHHHHHHHHHHHHHhCCCCcEEEEc-------cCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeC
Q 019093 149 REKVFIDTILQPLIQRLPQLKVVMEH-------ITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLP 221 (346)
Q Consensus 149 ~E~~av~~~l~~~la~~~g~~lhi~H-------vSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~P 221 (346)
| ..+++ .+.+....-.|..| .+..+..+.+++++...++..+ .+|
T Consensus 199 -~---~~~~~--~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~----------------------~~g 250 (379)
T PRK12394 199 -P---MKELV--SLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDA----------------------ANG 250 (379)
T ss_pred -c---HHHHH--HhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEe----------------------cCC
Confidence 1 12222 12111112233332 3333334444443311121111 011
Q ss_pred CCCChhhHHHHHHHHHcCC-ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhh
Q 019093 222 VLKREIHRQAVVSAVTSGS-RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPD 299 (346)
Q Consensus 222 PLR~~~d~~aL~~al~~G~-Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAk 299 (346)
|+..+.+.+|+++.+|. .++ |+|||+|... ..+ .+ ..|+.++...... .++++++++.+.|||+
T Consensus 251 --~s~~~~~~~~~~l~~G~~~~~-lgTD~~~~~~---~~~----~~----~~l~~~~~~~~~~~~~~~~~~~~at~~~a~ 316 (379)
T PRK12394 251 --RSHFDMNVARRAIANGFLPDI-ISSDLSTITK---LAW----PV----YSLPWVLSKYLALGMALEDVINACTHTPAV 316 (379)
T ss_pred --ccccchHHHHHHHHCCCCceE-EECCCCCCCc---ccC----cc----chHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 34446788999999996 788 8999999752 110 11 2345554433333 4899999999999999
Q ss_pred hcCCC-CC-------CccEEEEe
Q 019093 300 FYGLP-RN-------TSKIKLTK 314 (346)
Q Consensus 300 i~gl~-~k-------dAdlvi~d 314 (346)
+||++ ++ +|||+++|
T Consensus 317 ~~g~~~~~G~i~~G~~ADl~~~~ 339 (379)
T PRK12394 317 LMGMAAEIGTLAPGAFADIAIFK 339 (379)
T ss_pred HhCCCCCCCccCCCCccCEEEEe
Confidence 99995 32 79999999
No 43
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.80 E-value=7.2e-18 Score=162.04 Aligned_cols=255 Identities=13% Similarity=0.079 Sum_probs=138.6
Q ss_pred eEEecCccccceecCC-Ccccccccc--ccCCceeEEEeCCCCCCCCCcHHHHHHHH-HHHHhhCCCCccEEEEEEEEeC
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVP--HSVSHYGRAIVMPNLKPPITTTAAAVAYR-ESILKALPASSNFTPLMTLYLT 77 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~--s~sGGvTtvv~mPnt~p~~~~~~~~~~~~-~~~~~~~~~~vd~~~~~~~~~~ 77 (346)
++|+||+||+|+|+++ |.+++++-. ...||+||+++|||+.+ ++.+.+..+. ++....-.+.+||++++.. .
T Consensus 30 ~~v~PG~iD~H~H~~~~g~~~~~~~~~~a~~~GvTtvvd~~~~~~--~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~--~ 105 (338)
T cd01307 30 CYVSPGWIDLHVHVYQGGTRYGDRPDMIGVKSGVTTVVDAGSAGA--DNIDGFRYTVIERSATRVYAFLNISRVGLV--A 105 (338)
T ss_pred CEEecCeEEeeecCCCCCcccCCCHhHHHHcCceeEEEeCCCCCC--CCHHHHHHHHHHhhhceEEEEEeeeccccc--c
Confidence 4799999999999998 666655421 23499999999997665 5555534333 3333211112788877654 2
Q ss_pred CCC-------CHHHHHHH---HHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChh
Q 019093 78 DTT-------SPDEIKLA---RKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF 147 (346)
Q Consensus 78 ~~~-------~~~el~~l---~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~ 147 (346)
+.. ..+++.++ ...| |.|||+|+....+. ...+ ..+.+.++.++++|+|+++|+++...
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~e~~~g-i~gik~~~~~~~~~-~~~~----~~l~~~~~~a~~~~~pi~vH~~~~~~----- 174 (338)
T cd01307 106 QDELPDPDNIDEDAVVAAAREYPDV-IVGLKARASKSVVG-EWGI----KPLELAKKIAKEADLPLMVHIGSPPP----- 174 (338)
T ss_pred ccccCChhHCCHHHHHHHHHHCcCc-EEEEEEEeeccccc-ccCC----cHHHHHHHHHHHcCCCEEEEeCCCCC-----
Confidence 211 12233333 2357 89999998532211 1122 33778899999999999999998642
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH-------HHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEe
Q 019093 148 DREKVFIDTILQPLIQRLPQLKVVMEHITTMDA-------VKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCL 220 (346)
Q Consensus 148 ~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~-------l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~ 220 (346)
+ +..++ .+.+......|..+-+.... .+.++++....++..++.+ . ..+ ..
T Consensus 175 --~---~~~~~--~~l~~g~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G-------------~-~~~-~~ 232 (338)
T cd01307 175 --I---LDEVV--PLLRRGDVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHG-------------T-ASF-SF 232 (338)
T ss_pred --C---HHHHH--HHhcCCCEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCC-------------C-Cch-hH
Confidence 1 12222 12222122334433322000 1222222212233332210 0 000 00
Q ss_pred CCCCChhhHHHHHHHHHcCCc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhh
Q 019093 221 PVLKREIHRQAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGP 298 (346)
Q Consensus 221 PPLR~~~d~~aL~~al~~G~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPA 298 (346)
....+++..|.+ ++ ++||..+.. + . .| + ...++.+...+.. ..+++++.++++.|||
T Consensus 233 ---------~~~~~l~~~G~~~~~-lstD~~~~~---~---~--~~-p--~~~l~~~l~~l~~~gi~~ee~~~~~T~NpA 291 (338)
T cd01307 233 ---------RVARAAIAAGLLPDT-ISSDIHGRN---R---T--NG-P--VYALATTLSKLLALGMPLEEVIEAVTANPA 291 (338)
T ss_pred ---------HHHHHHHHCCCCCee-ecCCccccC---C---C--CC-c--cccHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 112334566864 57 899973211 1 0 11 1 1123333222233 3489999999999999
Q ss_pred hhcCCCC-C------CccEEEEe
Q 019093 299 DFYGLPR-N------TSKIKLTK 314 (346)
Q Consensus 299 ki~gl~~-k------dAdlvi~d 314 (346)
|+||+++ + .|||+++|
T Consensus 292 ~~lgl~~~G~l~~G~~ad~~v~~ 314 (338)
T cd01307 292 RMLGLAEIGTLAVGYDADLTVFD 314 (338)
T ss_pred HHcCCCCCCccCCCCcCCEEEEe
Confidence 9999942 2 79999998
No 44
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.80 E-value=4.3e-19 Score=176.29 Aligned_cols=263 Identities=11% Similarity=0.060 Sum_probs=161.6
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEe-----CCCCCCCCCcHHH--HHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIV-----MPNLKPPITTTAA--AVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~-----mPnt~p~~~~~~~--~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|||+++ ++. + ....|||||+++ |||++|+++++.. ++.+.+.+++ . .+||++++.
T Consensus 125 ~iV~PG~ID~HvH~~~P~~~-~---~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~-~--pvn~gf~gk 197 (568)
T PRK13985 125 LIVTAGGIDTHIHFISPQQI-P---TAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-Y--SMNLGFLGK 197 (568)
T ss_pred CEEEeCEEEeeCCCCCccHH-H---HHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhc-c--CccEEEecC
Confidence 4899999999999997 432 1 245699999999 7888888777654 3555554432 2 289988754
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
. +. .+.++|.++.++| +.|||++..+ +. +. ..++++|++++++|.++++||++-.- .-
T Consensus 198 G--~~-~~l~eL~el~~aG-A~GfK~~ed~-------g~-t~-~~I~~aL~vA~~~dv~V~iHtdtlne--------~g- 255 (568)
T PRK13985 198 G--NS-SNDASLADQIEAG-AIGFKIHEDW-------GT-TP-SAINHALDVADKYDVQVAIHTDTLNE--------AG- 255 (568)
T ss_pred C--cc-CCHHHHHHHHHcC-CEEEEECCcc-------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCCCC--------ch-
Confidence 2 22 3578899999999 6899987532 22 34 78999999999999999999997531 11
Q ss_pred HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHccC--C---------CeeEEEc---------cchhhccc-hhhhc
Q 019093 154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESCK--E---------GFVAATV---------TPQHLVLN-RNALF 209 (346)
Q Consensus 154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~ak--g---------~~vt~Et---------~ph~L~l~-~~~~~ 209 (346)
.++..++...|..+|++|+... .+=++|+-+. . .+.|.-| .-|||--+ .||+.
T Consensus 256 ---~~E~t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nvlp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~a 332 (568)
T PRK13985 256 ---CVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQ 332 (568)
T ss_pred ---hhHHHHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhh
Confidence 1122567778999999999862 3345555543 1 1112111 12333222 22221
Q ss_pred cCCCCCceEEeCCCCC----hhhHHHHHHHHHcCCccEEeecCCCCCCcc-----------ccccCCCCCC-ccchhHHH
Q 019093 210 QGGLRPHNYCLPVLKR----EIHRQAVVSAVTSGSRKFFLGTDSAPHERG-----------RKECACGCAG-IYNAPVAL 273 (346)
Q Consensus 210 ~~~~~~~~k~~PPLR~----~~d~~aL~~al~~G~Id~~i~SDHaP~~~~-----------~K~~~~~~~G-~~g~e~~l 273 (346)
| +.- -+|. .|| -|.+ -|.|.+ ++||.+.--+- .|.. ...| ++.-
T Consensus 333 ---f-a~s----rir~~tiaaed--~l~d---~G~~s~-~~SDs~~mgr~ge~~~r~~q~a~k~~--~~~g~l~~~---- 392 (568)
T PRK13985 333 ---F-ADS----RIRPQTIAAED--TLHD---MGIFSI-TSSDSQAMGRVGEVITRTWQTADKNK--KEFGRLKEE---- 392 (568)
T ss_pred ---h-hhh----hccccccccCc--hhhh---CCcEEE-EeccchhhCcccceeeehHHHHHHHH--HhcCCCCCc----
Confidence 0 000 1222 122 2333 399999 89998632211 0100 0001 1100
Q ss_pred HHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe-cceeec
Q 019093 274 SLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPWKVP 320 (346)
Q Consensus 274 p~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~~v~ 320 (346)
..-..+.++++.++..+.|||+.+|+.. |.||||||| ..+.++
T Consensus 393 ----~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~~~ 444 (568)
T PRK13985 393 ----KGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVK 444 (568)
T ss_pred ----cccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCCCC
Confidence 0001234678999999999999999842 279999998 444343
No 45
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.80 E-value=2.2e-18 Score=172.40 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=107.7
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeC-----CCCCCCCCcHH--HHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM-----PNLKPPITTTA--AAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m-----Pnt~p~~~~~~--~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|+|+++ ++. -...+|||||+++| |++.+..++.. .+..+.+.+. .+. +||++++.
T Consensus 131 ~iV~PG~ID~HVH~~~Pg~~----~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~p--vn~g~~g~ 203 (573)
T PRK13206 131 RILTAGAIDCHVHFICPQIV----DEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWP--VNVALLGK 203 (573)
T ss_pred CEEEeCEEeeeeccCCchHH----HHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCc--eeEEEecC
Confidence 4799999999999987 432 23456999999996 45555555544 2334444332 233 89998865
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
. +. ...+++.++.++| +.+||+|..+ +. +. ..++++|++++++|.++++||++-.- .-
T Consensus 204 g--~~-~~~~~L~el~~aG-A~GfKi~~d~-------g~-t~-~~i~~aL~~A~~~gv~V~iHadtlne--------~g- 261 (573)
T PRK13206 204 G--NT-VSAEALWEQLRGG-AGGFKLHEDW-------GS-TP-AAIDACLRVADAAGVQVALHSDTLNE--------AG- 261 (573)
T ss_pred c--Cc-CCHHHHHHHHHCC-CcEEeecCcc-------CC-CH-HHHHHHHHHHHHhCCEEEEECCCccc--------cc-
Confidence 3 22 3567899999999 7899998643 23 33 78999999999999999999997531 11
Q ss_pred HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHcc
Q 019093 154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESC 187 (346)
Q Consensus 154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~a 187 (346)
..+..++...|.++|++|+... .+=++|+-+
T Consensus 262 ---~~E~t~aa~~gr~iH~~H~egaggghapd~~~~~ 295 (573)
T PRK13206 262 ---FVEDTLAAIAGRSIHAYHTEGAGGGHAPDIITVA 295 (573)
T ss_pred ---hhhHHHHHhcCCeEEEEeccCCCcCcccHHHHhc
Confidence 1111467788999999999863 334555554
No 46
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.79 E-value=3.7e-18 Score=170.25 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=111.4
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeC---CCCCC-CCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---PNLKP-PITTTAAAVAYRESILKALPASSNFTPLMTLYL 76 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---Pnt~p-~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~ 76 (346)
++|+||+||+|||+++ ++. -....|||||+++| | +.| +.++++.++.+.+.++. .. +||++++..
T Consensus 129 ~IVtPG~ID~HVH~~~Pg~~----~aALagGVTTVi~gg~gP-t~p~~t~g~~~i~~~l~aa~~-~p--vN~g~~gkG-- 198 (569)
T PRK13308 129 LIATPGAIDVHVHFDSAQLV----DHALASGITTMLGGGLGP-TVGIDSGGPFNTGRMLQAAEA-WP--VNFGFLGRG-- 198 (569)
T ss_pred CEEEeCEEEeeeCCCCccHH----HHHHcCCCcEEecCCcCC-CCCCCCCCHHHHHHHHHHHhc-CC--ccEEEEcCC--
Confidence 4799999999999987 433 23456999999995 6 444 46677777777765543 33 899988653
Q ss_pred CCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH
Q 019093 77 TDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT 156 (346)
Q Consensus 77 ~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~ 156 (346)
.. ..+++|.++.++| +.+||+|+.+ +. +. ..++++|++++++|.++++||+.-.- . .
T Consensus 199 ~~-s~~aeL~eli~aG-A~GfKi~ed~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtlne--------~----g 255 (569)
T PRK13308 199 NS-SKPAALIEQVEAG-ACGLKIHEDW-------GA-MP-AAIDTCLEVADEYDFQVQLHTDTLNE--------S----G 255 (569)
T ss_pred cc-cCHHHHHHHHHCC-CCEEeecCCC-------CC-CH-HHHHHHHHHHHhcCCEEEEeCCCcCc--------c----h
Confidence 32 3578899999999 7899998643 22 33 78999999999999999999997321 1 1
Q ss_pred HHHHHHHhCCCCcEEEEccCC------HHHHHHHHcc
Q 019093 157 ILQPLIQRLPQLKVVMEHITT------MDAVKFVESC 187 (346)
Q Consensus 157 ~l~~~la~~~g~~lhi~HvSt------~~~l~~i~~a 187 (346)
.++..++...|..+|++|+.+ ++-++++.+.
T Consensus 256 ~~E~t~~a~~gr~iH~~H~egaggghapd~l~~~~~~ 292 (569)
T PRK13308 256 FVEDTLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEP 292 (569)
T ss_pred HHHHHHHHhcCCeEEEEeccCCccCchhHHHHHhCCC
Confidence 222246667799999999987 5555555543
No 47
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.78 E-value=1.7e-17 Score=168.28 Aligned_cols=248 Identities=13% Similarity=0.072 Sum_probs=151.5
Q ss_pred eEEecCccccceecCC-Ccccccccccc--CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEE---
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHS--VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLY--- 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~--sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~--- 75 (346)
++|+||+||+|+|++. +. ..++|.+. .||+||+++|||+.|..+..+.++.+.+.+++ +. +||.+.+...
T Consensus 46 ~~v~PG~ID~H~Hi~~~~~-~~~~~~~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~-~~--~d~~~~~~s~vp~ 121 (552)
T TIGR01178 46 EYAVPGFIDAHIHIESSML-TPSEFAKLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKK-TP--LNFYFMLPSCVPA 121 (552)
T ss_pred CEEEeCeEecccccCCCCC-ChhHHHHHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhc-CC--cEEEEECCCCCCC
Confidence 5899999999999987 44 34556554 49999999999999988899988888776653 34 7874432210
Q ss_pred ---eCC--CCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093 76 ---LTD--TTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR 149 (346)
Q Consensus 76 ---~~~--~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~ 149 (346)
.+. ....+++.++.+. | |.|+|.||+|. +....| ..+++.++.+++.|+++..||+.-.
T Consensus 122 ~~~e~~g~~~~~~~i~~~~~~~~-V~glke~m~~~----~v~~~d--~~~l~~i~~a~~~g~~I~gHap~l~-------- 186 (552)
T TIGR01178 122 LQFETSGAVLTAEDIDELMELDE-VLGLAEVMDYP----GVINAD--IEMLNKINSARKRNKVIDGHCPGLS-------- 186 (552)
T ss_pred CcccCCCCccCHHHHHHHHcCCC-ccEEEEEecch----hhcCCC--HHHHHHHHHHHhCCCEEEecCCCCC--------
Confidence 011 1146688888865 7 89999999752 222234 6677788999999999999999532
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093 150 EKVFIDTILQPLIQRLPQLKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI 227 (346)
Q Consensus 150 E~~av~~~l~~~la~~~g~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~ 227 (346)
...+..++ ..|.. .+|-++ .++++.++. |..+.. +.| .. ..
T Consensus 187 -----~~eL~~~~--~aGi~--~dHe~~s~~ea~e~~~~--Gm~~~i---------------r~g--s~---------~~ 229 (552)
T TIGR01178 187 -----GKLLNKYI--SAGIS--NDHESTSIEEAREKLRL--GMKLMI---------------REG--SA---------AK 229 (552)
T ss_pred -----HHHHHHHH--HcCCC--CCcCcCCHHHHHHHHHC--CCEEEE---------------eCC--cc---------cc
Confidence 12221012 23443 567552 344444332 544332 111 11 12
Q ss_pred hHHHHHHHHH--cCCccEEeecCC-CCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCC
Q 019093 228 HRQAVVSAVT--SGSRKFFLGTDS-APHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 228 d~~aL~~al~--~G~Id~~i~SDH-aP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl 303 (346)
+-+.+..++. ++.-.+ ++||- -|...-+ .| .+........+ ..++++++++.|.|||+.+||
T Consensus 230 n~~~~~~~~~~~~~~~~~-l~TD~~~~~~~~~-------~g------~l~~~v~~ai~~g~~~~~Al~maT~npA~~lgl 295 (552)
T TIGR01178 230 NLEALHPLINEKNCRSLM-LCTDDRHVNDILN-------EG------HINHIVRRAIEHGVDPFDALQMASINPAEHFGI 295 (552)
T ss_pred CHHHHHHHHhhcCCceEE-EEeCCCChhHHHh-------cC------CHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC
Confidence 2233444333 233455 89992 1211000 01 12222222222 348999999999999999999
Q ss_pred CC-C------CccEEEEe--cceee
Q 019093 304 PR-N------TSKIKLTK--IPWKV 319 (346)
Q Consensus 304 ~~-k------dAdlvi~d--~~~~v 319 (346)
+. + .|||+++| +.+.+
T Consensus 296 ~~~G~I~pG~~ADlvvl~~l~~~~v 320 (552)
T TIGR01178 296 DVGGLIAPGDPADFVILKDLRNFKV 320 (552)
T ss_pred CCCcccCCCCcCCEEEECCCCCceE
Confidence 52 2 89999998 55544
No 48
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.78 E-value=8.1e-18 Score=167.72 Aligned_cols=144 Identities=16% Similarity=0.110 Sum_probs=109.5
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeC---C----CCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---P----NLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---P----nt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||.|+|+++ ++. -....|||||+++| | |+.|...+++.++.+.+.++. .. +||++++.
T Consensus 125 ~iV~PG~ID~HvH~~~P~~~----~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~-~p--in~g~~gk 197 (567)
T cd00375 125 KIVTAGGIDTHVHFICPQQI----EEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADG-LP--VNIGFLGK 197 (567)
T ss_pred CEEeeceEECccCCCCccHH----HHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhc-CC--ceEEEEec
Confidence 4899999999999987 431 23456999999997 8 666677777888887776653 33 89998864
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
. + +.+.++|.++.++| +++||+|..+ +. +. ..++++|++++++|.++++||+.-. |.
T Consensus 198 g--~-~~~l~eL~e~~~aG-A~GfK~~eD~-------g~-t~-~~i~~aL~~A~~~dv~VaiHadtln--------e~-- 254 (567)
T cd00375 198 G--N-GSSPDALAEQIEAG-ACGLKLHEDW-------GA-TP-AAIDTCLSVADEYDVQVAIHTDTLN--------ES-- 254 (567)
T ss_pred C--c-cccHHHHHHHHHcC-CEEEEecCCC-------CC-CH-HHHHHHHHHHHhhCCEEEEECCCCC--------cc--
Confidence 3 2 23578899999999 6899998643 23 34 7899999999999999999999642 11
Q ss_pred HHHHHHHHHHhCCCCcEEEEccCC
Q 019093 154 IDTILQPLIQRLPQLKVVMEHITT 177 (346)
Q Consensus 154 v~~~l~~~la~~~g~~lhi~HvSt 177 (346)
-.++..++...|..+|++|+..
T Consensus 255 --g~~E~t~aa~~gr~iH~~H~eg 276 (567)
T cd00375 255 --GFVEDTIAAIKGRTIHTYHTEG 276 (567)
T ss_pred --hHHHHHHHHhcCCeEEEEecCC
Confidence 1222257888899999999986
No 49
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.77 E-value=1.6e-17 Score=166.66 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=107.1
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeC---CCC--CCCCCcH--HHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVM---PNL--KPPITTT--AAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~m---Pnt--~p~~~~~--~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|+|+++ ++ .-....|||||+++| |++ .|..+++ ..+..+.+..+. .. +||++++.
T Consensus 125 ~iV~PG~ID~HvH~~~P~~----~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~-~p--in~g~~g~ 197 (568)
T PRK13207 125 LIVTAGGIDTHIHFICPQQ----IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADA-FP--MNIGFLGK 197 (568)
T ss_pred CEEEeCeEECccCCccccH----HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhc-CC--ceEEEEcC
Confidence 4799999999999987 42 123456999999999 654 4444343 335555443332 22 78988764
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
. + ....+++.++.++| +.+||+|..+ +. +. ..++++|++++++|.++++||+...- .
T Consensus 198 g--~-~~~~~~L~e~i~aG-A~gfKi~~d~-------g~-t~-~~l~~aL~~A~~~gv~V~iHa~tlne--------~-- 254 (568)
T PRK13207 198 G--N-ASLPEALEEQIEAG-AIGLKLHEDW-------GA-TP-AAIDNCLSVADEYDVQVAIHTDTLNE--------S-- 254 (568)
T ss_pred C--C-cccHHHHHHHHHcC-CCEEeecCCC-------CC-CH-HHHHHHHHHHHHhCCEEEEeCCCccc--------c--
Confidence 2 2 23577899999999 6899999643 23 33 78999999999999999999986431 1
Q ss_pred HHHHHHHHHHhCCCCcEEEEccC------CHHHHHHHHc
Q 019093 154 IDTILQPLIQRLPQLKVVMEHIT------TMDAVKFVES 186 (346)
Q Consensus 154 v~~~l~~~la~~~g~~lhi~HvS------t~~~l~~i~~ 186 (346)
-..+..++...|..+|++|+. .++-++++.+
T Consensus 255 --G~~e~t~~a~~g~~iH~~H~egaggghapdii~~~~~ 291 (568)
T PRK13207 255 --GFVEDTIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGE 291 (568)
T ss_pred --hHHHHHHHhcCCCEEEEEeecCCCcCCchHHHHHhhc
Confidence 111114777889999999987 3555666665
No 50
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.77 E-value=2.6e-17 Score=165.39 Aligned_cols=269 Identities=14% Similarity=0.052 Sum_probs=160.5
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEe-------CCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIV-------MPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT 73 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~-------mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 73 (346)
++|+||+||+|||+++ ++. .....|||||+++ |||+.+.......++.+.+.+++ .. +||++++.
T Consensus 129 ~iVtPG~ID~HvH~~~P~~~----~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~-~p--vn~g~~gk 201 (572)
T PRK13309 129 LILTAAGIDTHIHLISPQQA----YHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEG-LP--VNVGILGK 201 (572)
T ss_pred CEEEeCEEEeecccCCcchH----HHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhcc-CC--cCEEEEcC
Confidence 4899999999999998 532 2455699999995 45666666666677777666553 23 89988754
Q ss_pred EEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 74 LYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 74 ~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
. +. ....+|.++.++| +.+||++..+ +. +. ..++++|++++++|.++++||++-. |...
T Consensus 202 g--~~-~~~~~l~el~~aG-a~gfk~~~d~-------g~-t~-~~L~~aLe~A~~~gv~VaiH~d~ln--------E~g~ 260 (572)
T PRK13309 202 G--NS-YGRGPLLEQAIAG-VAGYKVHEDW-------GA-TA-AALRHALRVADEVDIQVAVHTDSLN--------ECGY 260 (572)
T ss_pred C--CC-CCHHHHHHHHhcC-cEEEEecCcC-------Cc-CH-HHHHHHHHHHHhcCCEEEEeCCccc--------cchh
Confidence 2 22 2467888888899 6899998643 22 44 7899999999999999999999753 1111
Q ss_pred HHHHHHHHHHhCCCCcEEEEccCCH---HHHHHHHccCCCe-eEEEccc-------------------hhhccc-hhhhc
Q 019093 154 IDTILQPLIQRLPQLKVVMEHITTM---DAVKFVESCKEGF-VAATVTP-------------------QHLVLN-RNALF 209 (346)
Q Consensus 154 v~~~l~~~la~~~g~~lhi~HvSt~---~~l~~i~~akg~~-vt~Et~p-------------------h~L~l~-~~~~~ 209 (346)
+ .. .++++.+.++|++|.... .+=++|+-+..-+ +-..|.| |||--+ .||..
T Consensus 261 v-E~---~~aa~~grpih~~H~~Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~ 336 (572)
T PRK13309 261 V-ED---TIDAFEGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVA 336 (572)
T ss_pred H-HH---HHHHhCCCceeeeeccCcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChh
Confidence 2 12 478889999999999752 2334444432111 1122222 233211 11110
Q ss_pred cCCCCCceEEeCCCCChhhHHHHH-HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH--------HH
Q 019093 210 QGGLRPHNYCLPVLKREIHRQAVV-SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK--------VF 280 (346)
Q Consensus 210 ~~~~~~~~k~~PPLR~~~d~~aL~-~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~--------~~ 280 (346)
+ +.- =||. +|-+-| ..+..|.+-+ ++||+.--.+ ....+ +.++++..-.-.. ..
T Consensus 337 ---~-a~s----rig~--e~~~a~~~l~daGa~~~-~gSD~pv~gr-~~~~p-----~~~iq~Av~rk~~~g~l~~~~~~ 399 (572)
T PRK13309 337 ---F-AES----RVRP--ETIAAENVLHDMGVISM-FSSDSQAMGR-VGENW-----LRAIQTADAMKAARGKLPEDAAG 399 (572)
T ss_pred ---H-HHH----hhCc--hhhcchhHHHhCCCEEE-EcCCCCcccC-CcccH-----HHHHHHHHHHHhccCCCCccCCC
Confidence 0 000 0222 222333 3455688888 8999732111 00000 0111111111000 00
Q ss_pred HhcCCHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe-cceee
Q 019093 281 EEMGALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK-IPWKV 319 (346)
Q Consensus 281 ~~~~~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d-~~~~v 319 (346)
.+..++.+.++..+.|||+++|+. ++ .|||+||| ..+.+
T Consensus 400 ~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~~ 447 (572)
T PRK13309 400 NDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFGA 447 (572)
T ss_pred cccccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcCC
Confidence 123467788999999999999983 32 79999998 44433
No 51
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=99.73 E-value=1.5e-18 Score=140.19 Aligned_cols=124 Identities=20% Similarity=0.205 Sum_probs=97.6
Q ss_pred eEEecCccccceecCC-CccccccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT 80 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~ 80 (346)
++++||+||+|||+|+ |.++||++.+ |+..|||+.|.. +. +.. +.
T Consensus 2 kli~~g~vd~hVhlrepg~~~keti~t------T~~ampnt~paP---------------a~---itv----------~~ 47 (142)
T PF12890_consen 2 KLILPGLVDVHVHLREPGFEAKETIET------TWCAMPNTFPAP---------------AG---ITV----------ED 47 (142)
T ss_pred ceeehhhhhhhhhhhcccchhhhhhhc------eeeecCccCCCC---------------cc---eee----------ee
Confidence 6899999999999999 9999999987 899999999865 11 111 11
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-------------h-
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-------------I- 146 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-------------~- 146 (346)
..+| + + ++++++.++... ..+++.|+. ++++.++..||||++++.+ .
T Consensus 48 ~~~e-------~-~---------afsddg~giq~~-~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~~ 108 (142)
T PF12890_consen 48 DGEE-------A-F---------AFSDDGYGIQIQ-LLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGVY 108 (142)
T ss_pred cCcc-------e-E---------EEecCCceeeeH-HHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCCc
Confidence 2222 2 1 124556667665 788999999 8999999999999987631 1
Q ss_pred --hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHH
Q 019093 147 --FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDA 180 (346)
Q Consensus 147 --~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~ 180 (346)
-.+|...+.|.+ .|++.+||..||||+||+++
T Consensus 109 L~G~cEs~~~~rd~--lLak~~g~~yhVchvstkes 142 (142)
T PF12890_consen 109 LKGNCESVQCARDV--LLAKATGCHYHVCHVSTKES 142 (142)
T ss_pred CCCcchHHHHHHHH--HhhhccCCcEEEEEEeccCC
Confidence 258999999999 89999999999999999863
No 52
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=99.69 E-value=1.3e-15 Score=149.47 Aligned_cols=197 Identities=17% Similarity=0.118 Sum_probs=118.5
Q ss_pred eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEec-CCCCCCCChh-hhHHHHHHHHHHHHHHhCCCCcEE
Q 019093 94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIF-DREKVFIDTILQPLIQRLPQLKVV 171 (346)
Q Consensus 94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~-~~E~~av~~~l~~~la~~~g~~lh 171 (346)
...+|++++... ...+ +. +.+.++++.+++.|+++.+|+ |+........ ......+.. + .-....+.++.
T Consensus 176 ~~~~k~~~~~~~---~~~~-~~-~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 247 (411)
T cd01298 176 DGRIRVALAPHA---PYTC-SD-ELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGKRPVEY-L--EELGLLGPDVV 247 (411)
T ss_pred CCceEEEEeCCC---CccC-CH-HHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCCCHHHH-H--HHcCCCCCCeE
Confidence 456899875321 1223 34 789999999999999999996 4432100000 000001111 1 11223467766
Q ss_pred EEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCC
Q 019093 172 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 249 (346)
Q Consensus 172 i~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDH 249 (346)
|.|.+ +.+.++.+++. .+++++||++-. . ++. ..|| +++.++.|..-+ +|||+
T Consensus 248 i~H~~~l~~~~~~~l~~~---gi~~~~~p~~~~------~---~~~---~~~~---------~~~~~~~Gv~~~-~GsD~ 302 (411)
T cd01298 248 LAHCVWLTDEEIELLAET---GTGVAHNPASNM------K---LAS---GIAP---------VPEMLEAGVNVG-LGTDG 302 (411)
T ss_pred EEEecCCCHHHHHHHHHc---CCeEEEChHHhh------h---hhh---CCCC---------HHHHHHCCCcEE-EeCCC
Confidence 77766 56777777753 478899997521 1 111 1244 445677788877 89998
Q ss_pred CCCCccccccCCCCCCccch-hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe--c
Q 019093 250 APHERGRKECACGCAGIYNA-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK--I 315 (346)
Q Consensus 250 aP~~~~~K~~~~~~~G~~g~-e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d--~ 315 (346)
.+... ...-+ |..+++++.... ...++++++++.+.|||+++|++ .+ +|||+|+| .
T Consensus 303 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i~~G~~ADlvv~d~~~ 372 (411)
T cd01298 303 AASNN----------NLDMFEEMRLAALLQKLAHGDPTALPAEEALEMATIGGAKALGLDEIGSLEVGKKADLILIDLDG 372 (411)
T ss_pred CccCC----------CcCHHHHHHHHHHHhccccCCCCcCCHHHHHHHHHhhHHHHhCCccCCCcCCCccCCEEEEeCCC
Confidence 65321 01111 344444332111 13589999999999999999985 22 79999999 5
Q ss_pred ceeecCCccccCCccccc
Q 019093 316 PWKVPEAFSFSFGDIIPM 333 (346)
Q Consensus 316 ~~~v~~~~~~s~~~~sp~ 333 (346)
.|.++.+++.++..|+++
T Consensus 373 ~~~~~~~~~~~~~~~~~~ 390 (411)
T cd01298 373 PHLLPVHDPISHLVYSAN 390 (411)
T ss_pred CccCCccchhhHheEecC
Confidence 777777777777666555
No 53
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.69 E-value=3.9e-15 Score=147.26 Aligned_cols=244 Identities=14% Similarity=0.081 Sum_probs=149.2
Q ss_pred eEEecCccccceecCC-Cccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEe--
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYL-- 76 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~-- 76 (346)
++|+||+||+|+|++. +... +++.. ..||||||+++|++.|.....+.++.+.+..++ .. +++.+.+....
T Consensus 5 ~~v~PG~ID~H~Hi~~~~~~~-~~~~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~~-~p--~~~~~~~p~~vp~ 80 (422)
T cd01295 5 KYIVPGFIDAHLHIESSMLTP-SEFAKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAKK-TP--LDIFWMLPSCVPA 80 (422)
T ss_pred CEEccCEEEccCCcCCCCCCh-HHHHHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHhC-CC--ceEEEeCCCcCCC
Confidence 5899999999999987 4333 33432 349999999999999999999988877775432 33 67744332100
Q ss_pred CC------CCCHHHHHHHHHc-CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhh
Q 019093 77 TD------TTSPDEIKLARKT-GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDR 149 (346)
Q Consensus 77 ~~------~~~~~el~~l~~~-G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~ 149 (346)
++ ....+++.++.+. | |.++|-+|.|. .... ++ ..+.+.++.+++.|+++.+||-...
T Consensus 81 t~~e~~g~~~~~~~i~~l~~~~~-vvglgE~md~~----~v~~-~~-~~l~~~i~~A~~~g~~v~~Ha~g~~-------- 145 (422)
T cd01295 81 TPFETSGAELTAEDIKELLEHPE-VVGLGEVMDFP----GVIE-GD-DEMLAKIQAAKKAGKPVDGHAPGLS-------- 145 (422)
T ss_pred CCCCCCCCcCCHHHHHHHhcCCC-CcEEEEeccCc----cccC-Cc-HHHHHHHHHHHhCCCEEEEeCCCCC--------
Confidence 11 1136678888764 6 89999988652 1112 33 7899999999999999999996532
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChh
Q 019093 150 EKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREI 227 (346)
Q Consensus 150 E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~ 227 (346)
...+... ++ .|.. -+|-+ ..+.++.++ +|..+. +.+-. ...
T Consensus 146 -~~~L~a~----l~--aGi~--~dH~~~~~eea~e~l~--~G~~i~--i~~g~------------------------~~~ 188 (422)
T cd01295 146 -GEELNAY----MA--AGIS--TDHEAMTGEEALEKLR--LGMYVM--LREGS------------------------IAK 188 (422)
T ss_pred -HHHHHHH----HH--cCCC--CCcCCCcHHHHHHHHH--CCCEEE--EECcc------------------------cHh
Confidence 1122222 22 2332 13544 455666553 244332 22110 023
Q ss_pred hHHHHHHHHH--cCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCC
Q 019093 228 HRQAVVSAVT--SGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP 304 (346)
Q Consensus 228 d~~aL~~al~--~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~ 304 (346)
+.+.+.+.+. .+.--+ ++||. |+...-. ..| .+..+...... ..+++++++..+.|||++||++
T Consensus 189 ~~~~~~~~l~~~~~~~i~-l~TD~-~~~~~~~-----~~g------~~~~v~r~a~~~g~s~~eal~~aT~n~A~~~gl~ 255 (422)
T cd01295 189 NLEALLPAITEKNFRRFM-FCTDD-VHPDDLL-----SEG------HLDYIVRRAIEAGIPPEDAIQMATINPAECYGLH 255 (422)
T ss_pred hHHHHHHhhhhccCCeEE-EEcCC-CCchhhh-----hcc------hHHHHHHHHHHcCCCHHHHHHHHhHHHHHHcCCC
Confidence 3444555554 255556 89997 4321000 012 12222222223 3489999999999999999983
Q ss_pred C-C------CccEEEEe
Q 019093 305 R-N------TSKIKLTK 314 (346)
Q Consensus 305 ~-k------dAdlvi~d 314 (346)
. + .|||+++|
T Consensus 256 ~~G~i~~G~~AD~vv~~ 272 (422)
T cd01295 256 DLGAIAPGRIADIVILD 272 (422)
T ss_pred CCcccCCCCcCCEEEEC
Confidence 2 2 79999998
No 54
>PRK09237 dihydroorotase; Provisional
Probab=99.68 E-value=7.1e-15 Score=143.45 Aligned_cols=251 Identities=17% Similarity=0.121 Sum_probs=130.7
Q ss_pred eEEecCccccceecCCCcccccc-c--cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhC-CCCccEEEEEEEEeC
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAV-V--PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKAL-PASSNFTPLMTLYLT 77 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~-~--~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~~~~~~ 77 (346)
++|+||+||.|+|+..+...+++ . ....||+||+++||++.| ++.+.+..+.++..+.. ...+++.+++.. +
T Consensus 49 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~G~Ttv~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~--~ 124 (380)
T PRK09237 49 LYVSPGWIDLHVHVYPGSTPYGDEPDEVGVRSGVTTVVDAGSAGA--DNFDDFRKLTIEASKTRVLAFLNISRIGLL--A 124 (380)
T ss_pred CEEecCEEEeeecCCCCCCccCCCHHHHHHhCCcCEEEECCCCCC--CCHHHHHHHHHhhhCcEEEEEEeeeccccc--c
Confidence 48999999999999863222222 1 123499999999997554 56665554444321110 111344443322 1
Q ss_pred CC-------CCHHHHHHHHH---cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChh
Q 019093 78 DT-------TSPDEIKLARK---TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF 147 (346)
Q Consensus 78 ~~-------~~~~el~~l~~---~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~ 147 (346)
++ ...+++.++.+ .| +.|||.+|.+... ...++++ ..+...+ +++.|+++.+|+++...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~-v~glk~~~~~~v~-~~~~~~~--~~~~~~~--a~~~g~~v~~H~~~~~~----- 193 (380)
T PRK09237 125 QDELADLEDIDADAVAEAVKRNPDF-IVGIKARMSSSVV-GDNGIEP--LELAKAI--AAEANLPLMVHIGNPPP----- 193 (380)
T ss_pred cchhcCHhHCCHHHHHHHHHhCcCc-EEEEEEEEecccc-cccCCch--HHHHHHH--HHhcCCCEEEEcCCCCC-----
Confidence 11 12345666654 45 8999999865311 1222333 3343333 44889999999998642
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEccCC-----------HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093 148 DREKVFIDTILQPLIQRLPQLKVVMEHITT-----------MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH 216 (346)
Q Consensus 148 ~~E~~av~~~l~~~la~~~g~~lhi~HvSt-----------~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~ 216 (346)
+ ..+++ .+.+.-..-.|..+.+. ..+.+.++ ..++.+.+.+ ..
T Consensus 194 --~---~~~l~--~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~----~G~~~~ig~g---------------~~ 247 (380)
T PRK09237 194 --S---LEEIL--ELLRPGDILTHCFNGKPNRILDEDGELRPSVLEALE----RGVRLDVGHG---------------TA 247 (380)
T ss_pred --C---HHHHH--hhccCCCEEEecCCCCCCCccCCCCcchHHHHHHHH----CCEEEEecCC---------------CC
Confidence 1 12222 12222122233333332 12222222 1233333211 00
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCC-ccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHHHc
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGS-RKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAFTS 294 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~-Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~~s 294 (346)
.. +.+.+.+.+..|. .+. ++||..|-.. + .+ +. ..++.....+.+ ..+++++.++++
T Consensus 248 ~~---------~~~~~~~l~~~g~~~~~-l~tD~~~~~~--~------~~-~~--~~l~~~~~~~~~~g~~~~~al~~aT 306 (380)
T PRK09237 248 SF---------SFKVAEAAIAAGILPDT-ISTDIYCRNR--I------NG-PV--YSLATVMSKFLALGMPLEEVIAAVT 306 (380)
T ss_pred cc---------cHHHHHHHHHCCCCceE-EECCCCCCCc--c------cc-hH--hHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 00 1111223445674 468 8999755221 0 01 11 112222222223 348999999999
Q ss_pred hhhhhhcCCCC-C------CccEEEEe
Q 019093 295 FNGPDFYGLPR-N------TSKIKLTK 314 (346)
Q Consensus 295 ~nPAki~gl~~-k------dAdlvi~d 314 (346)
.|||++||++. + .|||+++|
T Consensus 307 ~n~A~~lgl~~~G~l~~G~~ADlvv~~ 333 (380)
T PRK09237 307 KNAADALRLPELGRLQVGSDADLTLFT 333 (380)
T ss_pred HHHHHHcCCCCCCcCCCCCcCCEEEEe
Confidence 99999999842 2 79999998
No 55
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.64 E-value=8e-15 Score=145.77 Aligned_cols=193 Identities=14% Similarity=0.114 Sum_probs=114.3
Q ss_pred HHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHHHHH
Q 019093 82 PDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQ 159 (346)
Q Consensus 82 ~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~~l~ 159 (346)
.+++.+++ +.|.+.|+|.|+.+ . ++ +.++++++.+++.|.++.+|+ |+.+. .+ ..+....+
T Consensus 186 ~~eL~~~v~~~~gv~g~~~~~~~----~-----~d-~~l~~i~~lA~~~G~~v~vH~~E~~~~------~~-~~l~~~~~ 248 (438)
T PRK07583 186 GERLADLVAEAGGLLGGVTYMNP----D-----LD-AQLDRLFRLARERGLDLDLHVDETGDP------AS-RTLKAVAE 248 (438)
T ss_pred HHHHHHHHHHcCCEEeCCCCCCC----C-----HH-HHHHHHHHHHHHhCCCcEEeECCCCCc------hH-HHHHHHHH
Confidence 36777665 34347888876531 1 23 789999999999999999999 55432 01 11222221
Q ss_pred HHHHhCCCCcEEEEccCCH---------HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH
Q 019093 160 PLIQRLPQLKVVMEHITTM---------DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ 230 (346)
Q Consensus 160 ~~la~~~g~~lhi~HvSt~---------~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~ 230 (346)
.........++++.|..+. +.++++++ ..++.-+||...+..... .....|+.|......
T Consensus 249 ~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~---~gv~vv~~P~~~~~l~~~--------~~~~~p~~~~~~~v~ 317 (438)
T PRK07583 249 AALRNGFEGKVTCGHCCSLAVQPEEQAQATIALVAE---AGIAIVSLPMCNLYLQDR--------QPGRTPRWRGVTLVH 317 (438)
T ss_pred HHHHhCCCCCEEEEeccchhcCCHHHHHHHHHHHHH---cCCeEEECcchhhhhcCC--------CcCCCCCCCCcchHH
Confidence 1122223457999998752 45666655 345667889754322111 111245555544444
Q ss_pred HHHHHHHcCCccEEeecCCCCCCccccccCCCCCC-ccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC----
Q 019093 231 AVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG-IYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR---- 305 (346)
Q Consensus 231 aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G-~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~---- 305 (346)
.|++ .|.-.+ +|||+.+- +|.+.| ...++.+..+.. ......+++++.++.+.|||+++|++.
T Consensus 318 ~l~~---aGV~va-lGtD~~~d-------~~~p~g~~~~~~~~~~a~~-~~~~~~~~~~al~~~T~~~A~~lg~~~~G~i 385 (438)
T PRK07583 318 ELKA---AGIPVA-VASDNCRD-------PFYAYGDHDMLEVFREAVR-ILHLDHPYDDWPAAVTTTPADIMGLPDLGRI 385 (438)
T ss_pred HHHH---CCCeEE-EEeCCCCC-------CCCCCCCcCHHHHHHHHHH-HHhcCCcHHHHHHHHhHHHHHHcCCCCCCCc
Confidence 4544 487777 99999641 222223 233344333322 111134788999999999999999853
Q ss_pred ---CCccEEEEe
Q 019093 306 ---NTSKIKLTK 314 (346)
Q Consensus 306 ---kdAdlvi~d 314 (346)
+.|||+|+|
T Consensus 386 ~~G~~ADlvv~d 397 (438)
T PRK07583 386 AVGAPADLVLFK 397 (438)
T ss_pred CCCCCCCEEEEc
Confidence 279999998
No 56
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.63 E-value=6e-15 Score=148.35 Aligned_cols=155 Identities=14% Similarity=0.087 Sum_probs=103.1
Q ss_pred eEEecCccccceecCCCccccccccccCCceeEEEe-----CCCCCCCCCcHHHHHH--HHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIV-----MPNLKPPITTTAAAVA--YRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~-----mPnt~p~~~~~~~~~~--~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|||+++.. .......||+||+++ |||+.|...+...+.. +.+.+. .. .++|++++..
T Consensus 124 kIV~PGlIDtHvH~~~P~---~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~-~~--~in~g~~g~g 197 (567)
T TIGR01792 124 KIVTAGGIDTHVHYISPQ---QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAAD-GL--PINFGFTGKG 197 (567)
T ss_pred CEEEECeEEeecCCCCcc---HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhc-cC--CccEEEEeCC
Confidence 489999999999998621 122345699999999 6788876665443322 223222 22 2888876432
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHH
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFI 154 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av 154 (346)
. ....+++.++.++| +.+||+|..| .. +. +.|+++++.++++|.++++|+|... |.-.+
T Consensus 198 --~-~~~~~~L~e~i~aG-a~gfK~h~~y-------~~-s~-e~L~~al~~A~e~gv~V~iH~ET~~--------E~g~v 256 (567)
T TIGR01792 198 --S-GSGPAALIEQIEAG-ACGLKVHEDW-------GA-TP-AAIDNALSVADEYDVQVAVHTDTLN--------ESGFV 256 (567)
T ss_pred --c-cchHHHHHHHHHcC-CcEEEeCCCC-------CC-CH-HHHHHHHHHHHHcCCEEEEeCCCcc--------cchHH
Confidence 2 22466788888888 6899998643 22 33 7899999999999999999997542 21112
Q ss_pred HHHHHHHHHhCCCCcEEEEccCC---HHHHHHHHcc
Q 019093 155 DTILQPLIQRLPQLKVVMEHITT---MDAVKFVESC 187 (346)
Q Consensus 155 ~~~l~~~la~~~g~~lhi~HvSt---~~~l~~i~~a 187 (346)
.. .++++.+.++|++|.-. ..+=++|+-+
T Consensus 257 e~----t~~a~g~rpIh~~H~~G~g~ghapdi~~~~ 288 (567)
T TIGR01792 257 ED----TIAAFKGRTIHTYHTEGAGGGHAPDIIVVV 288 (567)
T ss_pred HH----HHHHHCCCcchhHhhcCCCCCcHHHHHHHc
Confidence 11 35667789999999874 3334455544
No 57
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.63 E-value=1.4e-15 Score=140.74 Aligned_cols=262 Identities=14% Similarity=0.068 Sum_probs=142.1
Q ss_pred eEEecCcccccee--cCC---Cccccccccc-----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEE
Q 019093 2 ELTLTQPDDWHLH--LRD---GDLLKAVVPH-----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPL 71 (346)
Q Consensus 2 ~~vlPG~ID~HvH--~r~---g~~~ke~~~s-----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 71 (346)
++|+||+||+|+| +.. +....+...+ ..+|+|++++++++.+ ..+...... . ..+...
T Consensus 5 ~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~~~-----~~~~~~~~~---~----~~~~~~ 72 (304)
T PF13147_consen 5 KYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGTNP-----EELNRARRR---G----AGYPGS 72 (304)
T ss_dssp SEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSSSH-----HHHHHHHHH---E----SEEEEE
T ss_pred CEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCCCc-----hhhHHHHhh---c----cccccc
Confidence 4899999999999 433 2222333222 2499999999876543 211111111 1 222222
Q ss_pred EEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcC-CcEEEecCCCCCCCCh----
Q 019093 72 MTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN-MPLLVHGEVTDPIVDI---- 146 (346)
Q Consensus 72 ~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g-~~v~vHaE~~~~~~~~---- 146 (346)
... .......++..+.+.....+.++.+.+. .. +. ..+.+.++.+.+.| ..++.|++.. .....
T Consensus 73 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 141 (304)
T PF13147_consen 73 GAG--PRGTTIEELEALVDLIAAEGVGFVAAYN------GI-EG-PGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAIAEG 141 (304)
T ss_dssp CES--CCHHHHHHHHHHHHHHHHTEEEEESSST------HH-HH-HHHHHHHHHHHHHTHEEEEEECHHH-HHHHHHHHH
T ss_pred ccc--ccccchHHHHHHHHHHhhcCcceeeccc------cC-CH-HHHHHHHHHHHhcCCeeeecccchh-hHHHHHHhc
Confidence 111 1111122333333221122334333210 11 22 56778888888888 4444444433 11000
Q ss_pred ----------hhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHcc--CCCeeEEEccchhhccchhhhccCCCC
Q 019093 147 ----------FDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESC--KEGFVAATVTPQHLVLNRNALFQGGLR 214 (346)
Q Consensus 147 ----------~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~a--kg~~vt~Et~ph~L~l~~~~~~~~~~~ 214 (346)
...+...+.. .+....+..+++...+.....+.+... ++...+... ++.+.... .+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~ 209 (304)
T PF13147_consen 142 LDAMEHILPHEVAEALHLAE----ALAQGAGPGLHCHVASDDATAEGVAIAHGFGLPPTPLH----LLARDAAA----AG 209 (304)
T ss_dssp HHTTHHSTHHHHHHHHHHHH----HHHHHHTHCEEEEETSSHHHHHHHHHHHHTTHEEEEEE----HHHHHHHH----HG
T ss_pred ccchhhhhhhhHHHHHHHHH----HhhhccccchhhhhhhhhhhhHHHHHHHhhccccchHH----hhHHHHHh----cC
Confidence 0112222221 344445677777777766654322222 233333322 22222111 13
Q ss_pred CceEEeCCCC--ChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHH
Q 019093 215 PHNYCLPVLK--REIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEA 291 (346)
Q Consensus 215 ~~~k~~PPLR--~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~ 291 (346)
..++++||++ ...++..++++++.|...+ ++|||.|++.+ +-...+..+...++. ..+++++++
T Consensus 210 ~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~-l~sD~~~~~~~------------~~~~~~~~~~~~~~~~gl~~~~al~ 276 (304)
T PF13147_consen 210 IRFKVLPPLRLDLREDRAALRELLEAGVPVA-LGSDHAPSSTE------------GSGDLLHEAMRLAVRAGLSPEEALR 276 (304)
T ss_dssp GGGEESSCHHHHTHHHHHHHHHHHHTTSSEE-EEE-BBTTTTT------------CTTTHHHHHHHHHHHTSSTHHHHHH
T ss_pred ceeeeCCCccccchhhhHHHHHHHhCCCeEE-EEcCCcccccc------------cccccchhhhhHHhhcCCCHHHHHH
Confidence 7899999999 9999999999999999999 99999998644 122344444443444 458999999
Q ss_pred HHchhhhhhcCC-CCC-------CccEE
Q 019093 292 FTSFNGPDFYGL-PRN-------TSKIK 311 (346)
Q Consensus 292 ~~s~nPAki~gl-~~k-------dAdlv 311 (346)
.+|.|||++||| +++ +||||
T Consensus 277 ~~T~~pA~~lgl~~~~G~i~~G~~ADlv 304 (304)
T PF13147_consen 277 AATSNPARILGLDDDKGSIAPGKDADLV 304 (304)
T ss_dssp HHTHHHHHHTTBTTTSSSTSTTSB-EEE
T ss_pred HHHHHHHHHhCCCCCCccCCCCCCCCcC
Confidence 999999999998 432 88986
No 58
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.62 E-value=1.2e-14 Score=139.55 Aligned_cols=187 Identities=16% Similarity=0.166 Sum_probs=105.0
Q ss_pred HHHHHHHHcCCeeEEEEeecCCccCCC-----CCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHH
Q 019093 83 DEIKLARKTGVVFAVKLYPAGATTNSQ-----DGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTI 157 (346)
Q Consensus 83 ~el~~l~~~G~v~~~Kif~~~~~~~~~-----~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~ 157 (346)
.++.++.+.| +..+|+|+.+...... ..+ +. +.+.++++.+++.|.++.+||+... .+...
T Consensus 124 ~~v~~~~~~G-~~~iK~~~~g~~~~~~~~~~~~~~-~~-e~l~~~~~~A~~~g~~v~~H~~~~~-----------~i~~~ 189 (342)
T cd01299 124 AAVREQLRRG-ADQIKIMATGGVLSPGDPPPDTQF-SE-EELRAIVDEAHKAGLYVAAHAYGAE-----------AIRRA 189 (342)
T ss_pred HHHHHHHHhC-CCEEEEeccCCcCCCCCCCcccCc-CH-HHHHHHHHHHHHcCCEEEEEeCCHH-----------HHHHH
Confidence 3567777888 7999999864211110 123 34 7899999999999999999998631 22222
Q ss_pred HHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC-------hhh
Q 019093 158 LQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR-------EIH 228 (346)
Q Consensus 158 l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~-------~~d 228 (346)
+ ..|.. -|.|.. +.+.++.+++. .++...||.............+ .|+-.. ...
T Consensus 190 l------~~G~~-~i~H~~~~~~~~~~~l~~~---g~~~~~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 252 (342)
T cd01299 190 I------RAGVD-TIEHGFLIDDETIELMKEK---GIFLVPTLATYEALAAEGAAPG-------LPADSAEKVALVLEAG 252 (342)
T ss_pred H------HcCCC-EEeecCCCCHHHHHHHHHC---CcEEeCcHHHHHHHHhhccccC-------CCHHHHHHHHHHHHHH
Confidence 2 12443 367765 66777777653 4556677754321100000000 111000 011
Q ss_pred HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC-C--
Q 019093 229 RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP-R-- 305 (346)
Q Consensus 229 ~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~-~-- 305 (346)
...+.+....|. .+.++||..... .+|..-.+. +.+ ......+..++++..+.|||+++|+. +
T Consensus 253 ~~~~~~l~~~Gv-~v~~GTD~~~~~---------~~~~~~~~e-~~~---~~~~~~~~~~al~~~T~~~a~~~g~~~~~G 318 (342)
T cd01299 253 RDALRRAHKAGV-KIAFGTDAGFPV---------PPHGWNARE-LEL---LVKAGGTPAEALRAATANAAELLGLSDELG 318 (342)
T ss_pred HHHHHHHHHcCC-eEEEecCCCCCC---------CchhHHHHH-HHH---HHHhCCCHHHHHHHHHHHHHHHhCccCCcc
Confidence 223334455564 444899964200 011110110 111 11223588999999999999999983 2
Q ss_pred -----CCccEEEEe
Q 019093 306 -----NTSKIKLTK 314 (346)
Q Consensus 306 -----kdAdlvi~d 314 (346)
|.|||+|+|
T Consensus 319 ~i~~G~~ADlvvl~ 332 (342)
T cd01299 319 VIEAGKLADLLVVD 332 (342)
T ss_pred eECCCCcCCEEEEC
Confidence 279999998
No 59
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.62 E-value=2.5e-14 Score=130.91 Aligned_cols=218 Identities=20% Similarity=0.231 Sum_probs=131.3
Q ss_pred CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC------HH----HHHHHHHcCCeeEEE
Q 019093 29 VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS------PD----EIKLARKTGVVFAVK 98 (346)
Q Consensus 29 sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~------~~----el~~l~~~G~v~~~K 98 (346)
.+|+||++++++..+.....+.++...+.+.+... +.+.+..++ .+... .+ ++.++.+.| +.++|
T Consensus 46 ~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~-~~gi~ 120 (275)
T cd01292 46 AGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG--IRVVLGLGI--PGVPAAVDEDAEALLLELLRRGLELG-AVGLK 120 (275)
T ss_pred hcCceEEEeeEeecCccccchHHHHHHHHHHHhcC--eeeEEeccC--CCCccccchhHHHHHHHHHHHHHhcC-CeeEe
Confidence 39999999998776655444444555554443211 344333333 22111 22 233332336 78999
Q ss_pred EeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-
Q 019093 99 LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT- 177 (346)
Q Consensus 99 if~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt- 177 (346)
++..+. .....+ +.++++++.+++.|.++.+|+.+.... ...+.+++ .+... +.++++.|.+.
T Consensus 121 ~~~~~~----~~~~~~--~~~~~~~~~a~~~~~~i~~H~~~~~~~-------~~~~~~~~--~~~~~-~~~~~~~H~~~~ 184 (275)
T cd01292 121 LAGPYT----ATGLSD--ESLRRVLEEARKLGLPVVIHAGELPDP-------TRALEDLV--ALLRL-GGRVVIGHVSHL 184 (275)
T ss_pred eCCCCC----CCCCCc--HHHHHHHHHHHHcCCeEEEeeCCcccC-------ccCHHHHH--HHHhc-CCCEEEECCccC
Confidence 875321 111223 789999999999999999999876420 01123333 22322 78999999997
Q ss_pred -HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccc
Q 019093 178 -MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGR 256 (346)
Q Consensus 178 -~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~ 256 (346)
.+.++.+++. .+++++||+++.++. +....+..+.+.+..|...+ ++||+.+...
T Consensus 185 ~~~~~~~~~~~---g~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~-lgTD~~~~~~-- 240 (275)
T cd01292 185 DPELLELLKEA---GVSLEVCPLSNYLLG------------------RDGEGAEALRRLLELGIRVT-LGTDGPPHPL-- 240 (275)
T ss_pred CHHHHHHHHHc---CCeEEECCccccccc------------------CCcCCcccHHHHHHCCCcEE-EecCCCCCCC--
Confidence 7888888763 688999998776543 11223445677788898888 9999966530
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhh
Q 019093 257 KECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDF 300 (346)
Q Consensus 257 K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki 300 (346)
+ ..+-..+-.+........+++++.++++.||||.
T Consensus 241 -------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 241 -------G--TDLLALLRLLLKVLRLGLSLEEALRLATINPARA 275 (275)
T ss_pred -------C--CCHHHHHHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence 0 1111111111111111248999999999999984
No 60
>PLN02303 urease
Probab=99.59 E-value=7.6e-15 Score=151.22 Aligned_cols=119 Identities=18% Similarity=0.181 Sum_probs=88.6
Q ss_pred eEEecCccccceecCCCccccccccccC-----CceeEEEeCCCCCCCCC--cHHHHHHHHHHHHhhCCCCccEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV-----SHYGRAIVMPNLKPPIT--TTAAAVAYRESILKALPASSNFTPLMTL 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~--~~~~~~~~~~~~~~~~~~~vd~~~~~~~ 74 (346)
++|+||+||+|||++++...++++.+|+ ||+|++ |||.|.+. +++.++.+.+..+. .. +||++++..
T Consensus 394 lIVtPG~ID~HVHf~~Pg~~~eaLasGVTTai~GGtgp~---pnT~ptt~t~g~e~I~~~L~aa~~-~p--vn~Gf~gkG 467 (837)
T PLN02303 394 MIVTAGGIDCHVHFICPQLATEAIASGITTLVGGGTGPA---HGTCATTCTPAPSHMKLMLQSTDD-LP--LNFGFTGKG 467 (837)
T ss_pred CEEEeCEEEeecCCCCCcHHHHHHHHhHHHHHhcCCCCC---CcccCcCCCCCHHHHHHHHHhccc-CC--CcEEEEccC
Confidence 4899999999999998322367777764 677663 88888764 57777766653322 23 899987643
Q ss_pred EeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093 75 YLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV 139 (346)
Q Consensus 75 ~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~ 139 (346)
+. .+++++.++.++| +.+||.+..+ +++ . ..+.+++++++++|.++++||||
T Consensus 468 --~~-s~l~eL~elieaG-a~GfK~h~d~-------gvT-p-elL~raLe~AkelGVpVaIHAEd 519 (837)
T PLN02303 468 --NT-AKPEGLHEIIKAG-AMGLKLHEDW-------GTT-P-AAIDNCLDVAEEYDIQVTIHTDT 519 (837)
T ss_pred --cc-cCHHHHHHHHHcC-cEEEEECCCC-------CCC-H-HHHHHHHHHHHHcCCEEEEecCc
Confidence 22 3678899998889 7899987422 232 3 78999999999999999999998
No 61
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.59 E-value=1.6e-13 Score=134.09 Aligned_cols=271 Identities=11% Similarity=0.061 Sum_probs=147.8
Q ss_pred eEEecCccccceecCC-Cccc-----cccccc----cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLL-----KAVVPH----SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPL 71 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~-----ke~~~s----~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~ 71 (346)
.+|+||+||.|+|+-. +.+. .+.+ + ...|+|||++|-.+..-....+.+.++.+.+.... +.-..+
T Consensus 52 ~~v~PGlID~HvH~~~gg~~~~~~~~~~e~-~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~G---ir~~~~ 127 (389)
T TIGR01975 52 MIAVPGFIDQHVHIIGGGGEGGPTTRTPEL-TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEG---ISCYML 127 (389)
T ss_pred CEEccCEeehhhccccccccCCCccCCHHH-HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhC---CEEEEE
Confidence 4799999999999854 2111 1111 1 23899999999644333333332333333222211 222111
Q ss_pred EEEE-e-CCCCCHHHHHHHHHcCCeeEEE-EeecCCccCCCCCccChHHHHHHHHHHhHHcC----Cc--EEEecCCCCC
Q 019093 72 MTLY-L-TDTTSPDEIKLARKTGVVFAVK-LYPAGATTNSQDGVTDLFGKCVHVLEEMVEQN----MP--LLVHGEVTDP 142 (346)
Q Consensus 72 ~~~~-~-~~~~~~~el~~l~~~G~v~~~K-if~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g----~~--v~vHaE~~~~ 142 (346)
-+.+ + .+....++..++..--.|.|+| +=+..+.+ +. ... ..|.++-+.++..| ++ +++|..|...
T Consensus 128 ~g~~~~p~~t~t~~~~~d~~~~d~iiG~~~ia~sd~r~-~~---~~~-~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~ 202 (389)
T TIGR01975 128 TGAYHVPSRTITGSVESDLLLIDKVIGVGEIAISDHRS-AQ---PTV-EHLTNMAAEARVGGLLGGKPGIVNFHVGDSKR 202 (389)
T ss_pred cccccCCCcccccchhhheeeehhhcccceEEEccCcC-CC---CCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCCchh
Confidence 1111 0 0111112222222111267885 76643222 11 233 67888888888887 78 9999998642
Q ss_pred CCChhhhHHHHHHHHHHHHHHhCCCCcEEEE---ccC-C----HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCC
Q 019093 143 IVDIFDREKVFIDTILQPLIQRLPQLKVVME---HIT-T----MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLR 214 (346)
Q Consensus 143 ~~~~~~~E~~av~~~l~~~la~~~g~~lhi~---HvS-t----~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~ 214 (346)
.+..++ .+.+..+.|+|.- |+. + .++++.+++.--.++++..+|.+|-
T Consensus 203 ----------~l~~l~--~~~~~~di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~------------ 258 (389)
T TIGR01975 203 ----------ALQPIY--ELVENTDVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRK------------ 258 (389)
T ss_pred ----------hHHHHH--HHHHhcCCChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchh------------
Confidence 233444 4566666665554 444 3 2344443321114455333332111
Q ss_pred CceEEeCCCCChhhHHHHHHHHHcCC-cc--EEeecCCC---CCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHH
Q 019093 215 PHNYCLPVLKREIHRQAVVSAVTSGS-RK--FFLGTDSA---PHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALD 287 (346)
Q Consensus 215 ~~~k~~PPLR~~~d~~aL~~al~~G~-Id--~~i~SDHa---P~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~ 287 (346)
.+. ....+++-.++..|. +| + ++||.. |+..++. ..-..|+.+++.++..+...... ..+++
T Consensus 259 -----~~~---~~~~~~~~~~~~~Gv~~~~i~-isSD~~gs~p~~~~~g--~~~~~g~g~~~sl~~~~~~lv~~g~ls~~ 327 (389)
T TIGR01975 259 -----EGE---VAPAEGIKKALEAGVPLEKVT-FSSDGNGSQPFFDENG--ELTGLGVGSFETLFEEVREAVKDGDVPLE 327 (389)
T ss_pred -----ccc---cChHHHHHHHHHcCCCcceEE-EEeCCCCCCCcccccc--ccccCCcCcHHHHHHHHHHHHHhCCCCHH
Confidence 010 122345666777784 55 6 899974 3322211 11235888888888777654444 36899
Q ss_pred HHHHHHchhhhhhcCCCCC-------CccEEEEecc
Q 019093 288 KLEAFTSFNGPDFYGLPRN-------TSKIKLTKIP 316 (346)
Q Consensus 288 ~lv~~~s~nPAki~gl~~k-------dAdlvi~d~~ 316 (346)
++++.++.|||+++|++++ +|||+|+|..
T Consensus 328 eal~~~T~npA~~Lgl~~~G~I~~G~~ADlvild~~ 363 (389)
T TIGR01975 328 KALRVITSNVAGVLNLTGKGEISPGNDADLVVLDPD 363 (389)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECCCCcCCEEEEcCC
Confidence 9999999999999999532 8999999833
No 62
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=99.59 E-value=2e-14 Score=143.13 Aligned_cols=158 Identities=12% Similarity=0.123 Sum_probs=103.3
Q ss_pred HHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVES 186 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~ 186 (346)
+.+.++++.+++.|+++.+|+ |+.. |..++.+ .++ .+. ...+.++++.|.+ +.+.++++++
T Consensus 199 ~~l~~~~~~a~~~g~~v~~H~~e~~~--------~~~~~~~~~g~~~~~-~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~ 269 (445)
T PRK07228 199 ELLRGVRDLADEYGVRIHTHASENRG--------EIETVEEETGMRNIH-YLDEVGLTGEDLILAHCVWLDEEEREILAE 269 (445)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHHhCCCHHH-HHHHCCCCCCCcEEEEEecCCHHHHHHHHH
Confidence 788999999999999999999 4431 1111111 111 222 2457799999999 8889999876
Q ss_pred cCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093 187 CKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI 266 (346)
Q Consensus 187 akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~ 266 (346)
. | +..-+||+. ++.. + .....+++.+..|.... +||||.|+.... +
T Consensus 270 ~-g--~~v~~~P~~------~~~~---~------------~~~~p~~~~~~~Gv~v~-lGtD~~~~~~~~-~-------- 315 (445)
T PRK07228 270 T-G--THVTHCPSS------NLKL---A------------SGIAPVPDLLERGINVA-LGADGAPCNNTL-D-------- 315 (445)
T ss_pred c-C--CeEEEChHH------hhhc---c------------cccCcHHHHHHCCCeEE-EcCCCCccCCCc-c--------
Confidence 4 3 445589962 1110 0 11234788899999999 999997763211 0
Q ss_pred cchhHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCC-CC-C------CccEEEEe-cce
Q 019093 267 YNAPVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKLTK-IPW 317 (346)
Q Consensus 267 ~g~e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl-~~-k------dAdlvi~d-~~~ 317 (346)
+-.+..+.+++.... ...++++++++++.|||+++|+ +. + .|||+|+| ...
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~ 379 (445)
T PRK07228 316 PFTEMRQAALIQKVDRLGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGL 379 (445)
T ss_pred HHHHHHHHHHHhhhccCCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCc
Confidence 001334444433221 1347899999999999999999 33 2 89999999 443
No 63
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.56 E-value=5.7e-13 Score=129.39 Aligned_cols=132 Identities=11% Similarity=0.055 Sum_probs=72.0
Q ss_pred eEEecCccccceecCC-Cccccccccc--cCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCC
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLKAVVPH--SVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTD 78 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~ke~~~s--~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~ 78 (346)
++|+||+||.|+|+++ +...++++.. ..+|+|++++||++.+ ++.+.+....++........+++..++.. .+
T Consensus 46 ~~l~PG~ID~H~H~~~~~~~~~~~~~~~a~~~GvTt~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~G~~--~~ 121 (365)
T TIGR03583 46 TYVSAGWIDDHTHCFPKSALYYDEPDEIGVKTGVTTVVDAGSTGA--DDIDDFYRLAQQAKTNVFALLNISRIGLV--AQ 121 (365)
T ss_pred eEEecCEEEeeeccCCCcccccCCHhHhhhcCceeEEEeCCCCCC--CCHHHHHHHHHhhCCcEEEEeeehhcccc--Ch
Confidence 5899999999999986 4444555433 3489999999997654 44444443332211000000222222211 11
Q ss_pred CC-------CHHHHHHHHH--cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCC
Q 019093 79 TT-------SPDEIKLARK--TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTD 141 (346)
Q Consensus 79 ~~-------~~~el~~l~~--~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~ 141 (346)
.. ..+++.++.+ .+.+++||.+|+.. .....++++ ..+.+.+... +.|+++++|+++..
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~vv~~~~~~t~~-~i~E~gl~~--~~~~~~l~~~-~~~~pv~vH~~~a~ 189 (365)
T TIGR03583 122 DELADLSNLDASAVKQAVERYPDFIVGLKARMSKS-VVGDNGIEP--LEIAKQIQQE-NLELPLMVHIGSAP 189 (365)
T ss_pred hhhhChHHhHHHHHHHHHHhCcCcEEEEEEeeccc-ccccCCcCH--HHHHHHHHHh-cCCCcEEEEeCCCc
Confidence 10 1123443333 22388999998621 112234434 3444445444 68999999999864
No 64
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.40 E-value=1.7e-13 Score=130.14 Aligned_cols=111 Identities=13% Similarity=0.124 Sum_probs=67.5
Q ss_pred chhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCC-C-CCCccchhHHHHH
Q 019093 198 PQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECAC-G-CAGIYNAPVALSL 275 (346)
Q Consensus 198 ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~-~-~~G~~g~e~~lp~ 275 (346)
.|+.++ ++.+... ...+..+++++ .++.+.| .....+.+.+ ..+++.+.....|.... + ..|+.++....+-
T Consensus 193 ~~~~~~-~~~~~~~--~~~~~h~~~~~-~~~~~~l-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 266 (333)
T PF01979_consen 193 DHLGLL-EEAIDDG--VDLIAHGTHLS-DEEIELL-KETGIGIIHC-PISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAP 266 (333)
T ss_dssp HHHHSC-HHHHHHH--CEEEEEHTTSE-HHHHHHH-HHHTHEEEEE-HHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHH
T ss_pred ccchhh-hhhcccc--cceeeccccCC-HHHhhhh-hccCCccccc-cchhhhhccccccccccchhccccccccccccc
Confidence 666777 5554432 35677788888 3355545 5566677777 56666533333332111 2 2355556555554
Q ss_pred HHHHHHhc--------------------CCHHHHHHHHchhhhhhcCC-CCC-------CccEEEEe
Q 019093 276 YAKVFEEM--------------------GALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTK 314 (346)
Q Consensus 276 l~~~~~~~--------------------~~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d 314 (346)
++..+.+. .+++++++++|.||||+||+ +++ +|||||||
T Consensus 267 ~~~~~~~~g~~lgtDg~~~~l~~~~~~~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 267 LFRMLDKMGVNLGTDGVAEELKLFVRLGISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HHHHHHCTTHEETTCTTCHHHHHHHHHHSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred hhhhhhhcccccccccccccccccccccccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 44433331 67899999999999999999 442 89999998
No 65
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.37 E-value=8.9e-12 Score=121.49 Aligned_cols=266 Identities=14% Similarity=0.115 Sum_probs=144.2
Q ss_pred eEEecCccccceecCCC--cc--cccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093 2 ELTLTQPDDWHLHLRDG--DL--LKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM 72 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g--~~--~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 72 (346)
++|+||+||+|+|.++| .. .+|++.+. .+||||+++|+++.++....+.+..+++..++.. ....+++|.
T Consensus 47 ~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~-g~~~~g~hl 125 (374)
T cd00854 47 QYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQ-GAEILGIHL 125 (374)
T ss_pred CEecccEEEeeecccCCCCCCCCCHHHHHHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCC-CCeeEEEee
Confidence 47999999999999762 22 35676654 3999999999998887766676776666554321 013454443
Q ss_pred EE-EeCCC---C---------CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEE-EecC
Q 019093 73 TL-YLTDT---T---------SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLL-VHGE 138 (346)
Q Consensus 73 ~~-~~~~~---~---------~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~-vHaE 138 (346)
.- ++++. . ..+++.++.+.+ .-.+|+++- .. +. ..-.++++++++.|+++. -|..
T Consensus 126 eGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~-~~~ik~~tl---aP------E~-~~~~~~i~~~~~~gi~v~~GH~~ 194 (374)
T cd00854 126 EGPFISPEKKGAHPPEYLRAPDPEELKKWLEAA-GGLIKLVTL---AP------EL-DGALELIRYLVERGIIVSIGHSD 194 (374)
T ss_pred ecCccCcccCCCCCHHHcCCcCHHHHHHHHHhc-CCCEEEEEE---CC------CC-CChHHHHHHHHHCCeEEEeeCCc
Confidence 32 22211 1 234677777655 245788742 11 11 112578888999999984 7765
Q ss_pred CCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCC--------CeeEEEccchhhccchhhhcc
Q 019093 139 VTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKE--------GFVAATVTPQHLVLNRNALFQ 210 (346)
Q Consensus 139 ~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg--------~~vt~Et~ph~L~l~~~~~~~ 210 (346)
.. . ..+. -|...|.+. +.|+.....-.. .+..| ..++||...|-
T Consensus 195 a~-~---------~~~~------~a~~~G~~~-~tH~~n~m~~~~-~r~~~~~~a~l~~~~~~~~li~dg---------- 246 (374)
T cd00854 195 AT-Y---------EQAV------AAFEAGATH-VTHLFNAMSPLH-HREPGVVGAALSDDDVYAELIADG---------- 246 (374)
T ss_pred CC-H---------HHHH------HHHHcCCCe-eeECCCCCCCcC-CCCCcHHHHhhcCCCCeEEEEcCC----------
Confidence 22 1 1111 222346653 788754222110 11111 12444433321
Q ss_pred CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCc--------ccc-----ccCCC-CCC-ccchhHHHHH
Q 019093 211 GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHER--------GRK-----ECACG-CAG-IYNAPVALSL 275 (346)
Q Consensus 211 ~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~--------~~K-----~~~~~-~~G-~~g~e~~lp~ 275 (346)
..+. .++...+++.. |.=.+++.||.....- ..+ +.... ..| +.|-.+.|.-
T Consensus 247 ------~Hv~-----~~~~~~~~r~~--g~~~~~lvtD~~~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG~~~~l~~ 313 (374)
T cd00854 247 ------IHVH-----PAAVRLAYRAK--GADKIVLVTDAMAAAGLPDGEYELGGQTVTVKDGVARLADGTLAGSTLTMDQ 313 (374)
T ss_pred ------CcCC-----HHHHHHHHHhc--CCCcEEEEeccccccCCCCCeEEECCEEEEEECCEEEcCCCCeeehHhhHHH
Confidence 1122 25555666654 3223335688522211 110 00000 012 3333333333
Q ss_pred HHHHHHh--cCCHHHHHHHHchhhhhhcCCCC--C------CccEEEEecceeec
Q 019093 276 YAKVFEE--MGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLTKIPWKVP 320 (346)
Q Consensus 276 l~~~~~~--~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~d~~~~v~ 320 (346)
....+++ ..++++++++.+.|||+++|++. + .|||+++|..+.|.
T Consensus 314 ~~~~l~~~~~l~~~~al~~aT~npA~~lg~~~~~G~i~~G~~ADlvv~d~~~~v~ 368 (374)
T cd00854 314 AVRNMVKWGGCPLEEAVRMASLNPAKLLGLDDRKGSLKPGKDADLVVLDDDLNVK 368 (374)
T ss_pred HHHHHHHhhCCCHHHHHHHHhHHHHHHcCCCCCcCCcCCCCcCCEEEECCCCcEE
Confidence 3332333 24899999999999999999952 2 79999999655553
No 66
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.36 E-value=9.3e-11 Score=113.86 Aligned_cols=159 Identities=14% Similarity=0.135 Sum_probs=99.4
Q ss_pred eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EE
Q 019093 94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VV 171 (346)
Q Consensus 94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lh 171 (346)
+.++|++... +..+. +.+.++++.+++.|.++.+|+....... .+.... ..|.. .|
T Consensus 178 ~~~~~~~~~~-------~~~~~-~~~~~~~~~A~~~g~~v~~H~~e~~~~~--------~~~~~~------~~g~~~i~H 235 (371)
T cd01296 178 ADFCDVFCEK-------GAFSL-EQSRRILEAAKEAGLPVKIHADELSNIG--------GAELAA------ELGALSADH 235 (371)
T ss_pred CCEEEEeecC-------CccCH-HHHHHHHHHHHHCCCeEEEEEcCcCCCC--------HHHHHH------HcCCCeeHH
Confidence 6788887431 11234 7889999999999999999997543100 111111 12322 24
Q ss_pred EEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093 172 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP 251 (346)
Q Consensus 172 i~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP 251 (346)
..|+ +.+.++.+++. .+.+.+||...+.. +.+ .||+ .+.+..|.... ++|||.|
T Consensus 236 ~~~~-~~~~i~~la~~---g~~v~~~P~~~~~l-------~~~-----~~~~---------~~l~~~Gv~v~-lgsD~~p 289 (371)
T cd01296 236 LEHT-SDEGIAALAEA---GTVAVLLPGTAFSL-------RET-----YPPA---------RKLIDAGVPVA-LGTDFNP 289 (371)
T ss_pred hcCC-CHHHHHHHHHc---CCeEEEChHHHHHh-------CCC-----CCCH---------HHHHHCCCcEE-EecCCCC
Confidence 4555 46777777753 46778888643221 111 4554 35677798888 8999966
Q ss_pred CCccccccCCCCCCccchhHHHHHHHH-HH-HhcCCHHHHHHHHchhhhhhcCCC-C-C------CccEEEEe
Q 019093 252 HERGRKECACGCAGIYNAPVALSLYAK-VF-EEMGALDKLEAFTSFNGPDFYGLP-R-N------TSKIKLTK 314 (346)
Q Consensus 252 ~~~~~K~~~~~~~G~~g~e~~lp~l~~-~~-~~~~~l~~lv~~~s~nPAki~gl~-~-k------dAdlvi~d 314 (346)
+.. + ...++..+. .. ..+.++++++++++.|||+++|+. + + .|||+|+|
T Consensus 290 ~~~-------------~-~~~l~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d 348 (371)
T cd01296 290 GSS-------------P-TSSMPLVMHLACRLMRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILD 348 (371)
T ss_pred CCC-------------h-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEEC
Confidence 531 0 111222222 22 235689999999999999999994 3 2 89999999
No 67
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.35 E-value=2e-10 Score=114.84 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=34.3
Q ss_pred CCHHHHHHHHchhhhhhcCCC-CC------CccEEEEe-cceeecCCcccc
Q 019093 284 GALDKLEAFTSFNGPDFYGLP-RN------TSKIKLTK-IPWKVPEAFSFS 326 (346)
Q Consensus 284 ~~l~~lv~~~s~nPAki~gl~-~k------dAdlvi~d-~~~~v~~~~~~s 326 (346)
.+++++++++|.||||+|||+ ++ +|||+|+| .+.+++.+++.+
T Consensus 427 LSLeei~~mtT~nPAKiLGL~~kG~L~~G~~ADLvIfD~n~~~v~~~dl~s 477 (541)
T cd01304 427 YSLYEIAIMTRAGPAKLLGLSDKGHLGVGADADIAIYDDDPDQVDPSDYEK 477 (541)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCccCCCCcCCEEEEeCCcCccCchhhcC
Confidence 379999999999999999994 32 89999999 554776655543
No 68
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.31 E-value=7.4e-10 Score=105.59 Aligned_cols=271 Identities=13% Similarity=0.026 Sum_probs=140.2
Q ss_pred ecCccccceecCC-Cccc--ccccc--c---------cCCceeEEEeCC---CCCCCCCcHHHHHHHHHHHHhh---CCC
Q 019093 5 LTQPDDWHLHLRD-GDLL--KAVVP--H---------SVSHYGRAIVMP---NLKPPITTTAAAVAYRESILKA---LPA 64 (346)
Q Consensus 5 lPG~ID~HvH~r~-g~~~--ke~~~--s---------~sGGvTtvv~mP---nt~p~~~~~~~~~~~~~~~~~~---~~~ 64 (346)
|||+||+|+=-=| -... .-.|. . .+-||||+++-- ...+.....+......+.+... ...
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL 80 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence 7999999983211 0111 11121 1 237999998831 1222222344444443333221 111
Q ss_pred CccEEEEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHh-HHcCCcEEEecCCCCCC
Q 019093 65 SSNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEM-VEQNMPLLVHGEVTDPI 143 (346)
Q Consensus 65 ~vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~-~~~g~~v~vHaE~~~~~ 143 (346)
.+|-.+|.-.-++.....+++.++.+.+ -+.+-.||... .+.....+. .+.-++. ++.|.. ..|-..++
T Consensus 81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~-~v~lvs~~dH~--pg~~q~~~~----~~~~~~~~~~~~~~---~~~~~~~~ 150 (325)
T cd01306 81 RADHRLHLRCELADPAVLPELESLMADP-RVHLVSLMDHT--PGQRQFRDL----EKYREYYAKKYGLS---DEEVEEAI 150 (325)
T ss_pred hhhcceEEEEeecCccHHHHHHHHhcCC-CcCEEEEeCCC--CccccccCH----HHHHHHHHhhcCCC---HHHHHHHH
Confidence 2565555443222223466788887777 34666678642 222223332 2222233 223321 11111111
Q ss_pred CCh--hhhH--HHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEEccchhhccchhhhcc-CCCCCce
Q 019093 144 VDI--FDRE--KVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHN 217 (346)
Q Consensus 144 ~~~--~~~E--~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~-~~~~~~~ 217 (346)
... ...+ .+.+..++ .+|+..|+++ ..|.. +.+.++...+. |..+ +| |+ .+.+.... ...|...
T Consensus 151 ~~~~~~~~~~~~~~~~~iv--~~A~~~gl~v-asH~d~~~~~v~~a~~~-Gv~~-~E----~p-~t~e~a~~a~~~G~~v 220 (325)
T cd01306 151 LERKARAAAYAPANRSELA--ALARARGIPL-ASHDDDTPEHVAEAHEL-GVVI-SE----FP-TTLEAAKAARELGLQT 220 (325)
T ss_pred HHHHHHhhhcCHHHHHHHH--HHHHHCCCcE-EEecCCChHHHHHHHHC-CCee-cc----CC-CCHHHHHHHHHCCCEE
Confidence 000 0001 12344455 5777788886 55664 56666655543 4433 34 11 23333211 0124455
Q ss_pred EEeCC--CCCh--hhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHh-cCCHHHHHHH
Q 019093 218 YCLPV--LKRE--IHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEE-MGALDKLEAF 292 (346)
Q Consensus 218 k~~PP--LR~~--~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~~~l~~lv~~ 292 (346)
.+.+| +|.. .....+++++..|.+++ ++|||.|.+ .+...+..... ..++++++++
T Consensus 221 v~gapn~lrg~s~~g~~~~~~ll~~Gv~~a-l~SD~~p~s------------------ll~~~~~la~~~gl~l~eAl~~ 281 (325)
T cd01306 221 LMGAPNVVRGGSHSGNVSARELAAHGLLDI-LSSDYVPAS------------------LLHAAFRLADLGGWSLPEAVAL 281 (325)
T ss_pred EecCcccccCccccccHhHHHHHHCCCeEE-EEcCCCcHh------------------HHHHHHHHHHHcCCCHHHHHHH
Confidence 55565 4443 23457889999999999 999997642 12333333233 3589999999
Q ss_pred HchhhhhhcCCC-CC------CccEEEEe
Q 019093 293 TSFNGPDFYGLP-RN------TSKIKLTK 314 (346)
Q Consensus 293 ~s~nPAki~gl~-~k------dAdlvi~d 314 (346)
.|.|||+++|++ ++ .|||++||
T Consensus 282 aT~nPA~~lGl~d~G~I~~G~~ADlvvvd 310 (325)
T cd01306 282 VSANPARAVGLTDRGSIAPGKRADLILVD 310 (325)
T ss_pred HhHHHHHHcCCCCCCCcCCCCCCCEEEEe
Confidence 999999999994 32 79999998
No 69
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.21 E-value=1.8e-09 Score=110.42 Aligned_cols=242 Identities=12% Similarity=0.049 Sum_probs=135.8
Q ss_pred eEEecCccccceecCCCcccccccccc--CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEE--EEeC
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHS--VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMT--LYLT 77 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~--sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~--~~~~ 77 (346)
++|+||+||.|+|++....+.++|.+. .||+|||++||++.|.....+.++...+..... . .++++.+- .-.+
T Consensus 80 ~~v~PGlIDaHvHiess~~~p~~~a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~-p--~~~~~~~ps~vpa~ 156 (588)
T PRK10027 80 ATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQA-R--QNQYLQVSSCVPAL 156 (588)
T ss_pred CEEEECeEeccccCCcccCCHhHHHHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhC-C--CeeEEeecccCcCC
Confidence 489999999999999844467778764 399999999999999998888887776655442 2 45443221 1001
Q ss_pred C-----C--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhH
Q 019093 78 D-----T--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDRE 150 (346)
Q Consensus 78 ~-----~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E 150 (346)
+ + ...+++.++.+...|.|.==.|.|. +....|. ..+.++. .+ .|+++-=||=--+
T Consensus 157 ~~~Et~Ga~~~~~~~~~~l~~~~v~glgEvMn~~----~V~~~d~-~~~~ki~-~~--~~~~idGH~p~l~--------- 219 (588)
T PRK10027 157 EGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYP----GVISGQN-ALLDKLD-AF--RHLTLDGHCPGLG--------- 219 (588)
T ss_pred cccccCCCcCCHHHHHHHhcCCCceeEEeccCcc----ccccCCH-HHHHHHH-Hh--CCCceECCCCCCC---------
Confidence 1 1 1346788887654466664445431 1111243 4455544 33 6888777775322
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhh
Q 019093 151 KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIH 228 (346)
Q Consensus 151 ~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d 228 (346)
.+.|.-+++ .|+. =+|-+ -.++++.+|. |..|. + +. |+.. .|
T Consensus 220 ----g~~L~ay~a--aGi~--sDHE~~t~eea~eklr~--Gm~v~---------i------Re--gS~~---------~n 263 (588)
T PRK10027 220 ----GKELNAYIA--AGIE--NCHESYQLEEGRRKLQL--GMSLM---------I------RE--GSAA---------RN 263 (588)
T ss_pred ----hHHHHHHHH--cCCC--CCcccCCHHHHHHHHHC--CCEEE---------E------eC--Cccc---------cC
Confidence 111111222 2332 45554 3455555542 44332 1 11 1211 23
Q ss_pred HHHHHHHHHc---CCccEEeecCCCC-CCccccccCCCCCCccchhHHHHHHHHHHHh-c-CCHHHHHHHHchhhhhhcC
Q 019093 229 RQAVVSAVTS---GSRKFFLGTDSAP-HERGRKECACGCAGIYNAPVALSLYAKVFEE-M-GALDKLEAFTSFNGPDFYG 302 (346)
Q Consensus 229 ~~aL~~al~~---G~Id~~i~SDHaP-~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~-~-~~l~~lv~~~s~nPAki~g 302 (346)
-++|..++.+ ..+ + +.||-.+ ...-++ | . +......+.+ . .++++.+++.|.|||+.||
T Consensus 264 l~~l~~~~~~~~~~~~-~-l~TDd~~~~~l~~~-------G--h----i~~~vr~av~~~Gi~~~~Ai~mAT~nPA~~lg 328 (588)
T PRK10027 264 LNALAPLINEFNSPQC-M-LCTDDRNPWEIAHE-------G--H----IDALIRRLIEQHNVPLHVAYRVASWSTARHFG 328 (588)
T ss_pred HHHHHHHhhccCCCeE-E-EEcCCCChHHHHhc-------c--C----HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 3445555433 122 4 5677532 111111 2 1 2222222223 3 4899999999999999999
Q ss_pred CC-CC------CccEEEEe
Q 019093 303 LP-RN------TSKIKLTK 314 (346)
Q Consensus 303 l~-~k------dAdlvi~d 314 (346)
|+ .+ .|||+++|
T Consensus 329 l~d~G~IapG~~ADlvvld 347 (588)
T PRK10027 329 LNHLGLLAPGKQADIVLLS 347 (588)
T ss_pred CCCCcccCCCCcCCEEEEc
Confidence 95 32 79999998
No 70
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.21 E-value=2.2e-10 Score=111.77 Aligned_cols=71 Identities=15% Similarity=0.056 Sum_probs=50.3
Q ss_pred eEEecCccccceecCCC----ccccccccccC-----CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093 2 ELTLTQPDDWHLHLRDG----DLLKAVVPHSV-----SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM 72 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g----~~~ke~~~s~s-----GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 72 (346)
.+|+||+||+|+|...| ....|++.+.+ +|+|+++.++.|.|+.+..+.++.+.+..++. ..+.++++|.
T Consensus 52 ~~i~PGfID~HvHg~~g~~~~~~~~e~~~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~-~~a~~lG~Hl 130 (380)
T TIGR00221 52 NVLTPGFIDIHIHGCGGVDTNDASFETLEIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKE-KNAQALGLHL 130 (380)
T ss_pred CEEccceeeeeeccccCcCCCCCCHHHHHHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhcc-CCceeeeEee
Confidence 47999999999998652 12346776653 99999999999988777777777665543222 1236888876
Q ss_pred E
Q 019093 73 T 73 (346)
Q Consensus 73 ~ 73 (346)
-
T Consensus 131 E 131 (380)
T TIGR00221 131 E 131 (380)
T ss_pred e
Confidence 5
No 71
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.17 E-value=5e-09 Score=102.01 Aligned_cols=163 Identities=14% Similarity=0.128 Sum_probs=95.8
Q ss_pred CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEE
Q 019093 92 GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVV 171 (346)
Q Consensus 92 G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lh 171 (346)
|.|.++|++-. . ..... ..+.++++.+++.|.++.+|+....- .. .+.... .+ ... .--|
T Consensus 180 ~~v~~~~~~~~-----~--~~~~~-~~~~~~~~~A~~~g~~v~~H~~e~~~---~~-----~~~~~~--~~-g~~-~~~H 239 (377)
T TIGR01224 180 GLASFADVFCE-----A--GVFSV-EQSRRILQAAQEAGLPVKLHAEELSN---LG-----GAELAA--KL-GAV-SADH 239 (377)
T ss_pred CCCCeeEEEec-----C--CCcCH-HHHHHHHHHHHHCCCCEEEEecCCCC---CC-----HHHHHH--Hc-CCC-ccHH
Confidence 33677776631 1 11123 67899999999999999999964321 00 111111 11 111 1126
Q ss_pred EEccCCHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093 172 MEHITTMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP 251 (346)
Q Consensus 172 i~HvSt~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP 251 (346)
..|+ +.+.++.+++. .+...+||..-+.. + ...||+| +.+..|..-. ++||+.|
T Consensus 240 ~~~~-~~~~l~~la~~---g~~~~~~P~~~~~l---------~---~~~~p~~---------~l~~~Gv~v~-lgTD~~~ 293 (377)
T TIGR01224 240 LEHA-SDAGIKALAEA---GTVAVLLPGTTFYL---------R---ETYPPAR---------QLIDYGVPVA-LATDLNP 293 (377)
T ss_pred HhcC-CHHHHHHHHhc---CCEEEECchHHHhc---------C---CcCccHH---------HHHHCCCCEE-EECCCCC
Confidence 6666 56777777653 56788999743211 1 1224432 2345688777 8999865
Q ss_pred -CCccccccCCCCCCccchhHHHHHH-HHHHHhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093 252 -HERGRKECACGCAGIYNAPVALSLY-AKVFEEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK 314 (346)
Q Consensus 252 -~~~~~K~~~~~~~G~~g~e~~lp~l-~~~~~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d 314 (346)
... ...+.-.+ ......+.+++++.++++.|||+++|++. |.|||+|+|
T Consensus 294 ~~~~--------------~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d 352 (377)
T TIGR01224 294 GSSP--------------TLSMQLIMSLACRLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILS 352 (377)
T ss_pred CCCh--------------hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEc
Confidence 210 01111111 11122346899999999999999999843 289999999
No 72
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=99.08 E-value=1.1e-08 Score=102.14 Aligned_cols=159 Identities=12% Similarity=0.023 Sum_probs=90.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhh-hHHH---HHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD-REKV---FIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG 190 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~-~E~~---av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~ 190 (346)
+.+.++++.+++.|.++.+|+....- .... .+.. .+.+ + .-....+.++.+.|.. +.+.++++++.
T Consensus 214 e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~~~~~~-l--~~~g~l~~~~~~~H~~~l~~~~~~~la~~--- 285 (451)
T PRK08203 214 ELMRESAALARRLGVRLHTHLAETLD--EEAFCLERFGMRPVDY-L--EDLGWLGPDVWLAHCVHLDDAEIARLART--- 285 (451)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHH--HHHHHHHHhCCCHHHH-H--HHcCCCCCCeEEEEEeCCCHHHHHHHHhc---
Confidence 78999999999999999999843210 0000 0000 0111 1 1122335676666665 46677877754
Q ss_pred eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchh
Q 019093 191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAP 270 (346)
Q Consensus 191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e 270 (346)
.+.+-.||.. .+. .+ .-.+| +.+.+..|.-=. +|||..+.. ..+-+--|
T Consensus 286 g~~v~~~P~~------~~~---l~---~~~~~---------~~~~~~~Gv~v~-lGtD~~~~~---------~~~~~~~~ 334 (451)
T PRK08203 286 GTGVAHCPCS------NMR---LA---SGIAP---------VRELRAAGVPVG-LGVDGSASN---------DGSNLIGE 334 (451)
T ss_pred CCeEEECcHH------hhh---hc---cCCCC---------HHHHHHCCCeEE-EecCCCccC---------CCcCHHHH
Confidence 3455678842 111 01 11233 334455566556 899963211 00111124
Q ss_pred HHHHHHHHHHH---hcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093 271 VALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK 314 (346)
Q Consensus 271 ~~lp~l~~~~~---~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d 314 (346)
..++++..... ...++.+++++++.|||+++|++. |.|||+|+|
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~l~~~T~~~A~~lg~~~~G~l~~G~~ADlvv~d 388 (451)
T PRK08203 335 ARQALLLQRLRYGPDAMTAREALEWATLGGARVLGRDDIGSLAPGKLADLALFD 388 (451)
T ss_pred HHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCccCEEEEc
Confidence 45555443222 135789999999999999999852 279999999
No 73
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.07 E-value=1.7e-08 Score=101.63 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=28.1
Q ss_pred cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe
Q 019093 283 MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 314 (346)
Q Consensus 283 ~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d 314 (346)
..++++++++++.||||+|||+. + +|||+|+|
T Consensus 429 e~sL~EI~~mtTanPAkaLGL~dkG~L~pGa~ADIaI~D 467 (556)
T TIGR03121 429 EYSLYEIAIMTRAGPAKLLGLTDRGHLGVGADADIAVYD 467 (556)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence 34799999999999999999953 2 89999998
No 74
>PRK09356 imidazolonepropionase; Validated
Probab=99.07 E-value=1.3e-08 Score=100.21 Aligned_cols=147 Identities=15% Similarity=0.081 Sum_probs=85.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 196 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et 196 (346)
+.+.++++.+++.|.++.+|+....- .+ .+.... . ..... -.|..++ +.+.++++++. .+.+.+
T Consensus 222 ~~l~~~~~~A~~~g~~v~~H~~~~~~------~~--~~~~~~--~-~~~~~-~~H~~~~-~~~~~~~la~~---g~~~~~ 285 (406)
T PRK09356 222 EQSERVLEAAKALGLPVKIHAEQLSN------LG--GAELAA--E-YGALS-ADHLEYL-DEAGIAAMAEA---GTVAVL 285 (406)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecccC------CC--HHHHHH--H-cCCcE-ehHhhcC-CHHHHHHHHHh---CCEEEE
Confidence 78999999999999999999863211 00 111111 1 11111 1244444 56778887753 456778
Q ss_pred cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093 197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY 276 (346)
Q Consensus 197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l 276 (346)
||...+. + +. ...+| +.+.++.|.... ++||+.|... + ..+ +...
T Consensus 286 ~P~~~~~----l-----~~--~~~~~---------~~~l~~~Gi~v~-lgtD~~~~~~---------~-~~~----~~~~ 330 (406)
T PRK09356 286 LPGAFYF----L-----RE--TQYPP---------ARLLRDAGVPVA-LATDFNPGSS---------P-TES----LLLA 330 (406)
T ss_pred Cccchhh----c-----Cc--ccCch---------HHHHHHCCCeEE-EeCCCCCCCC---------h-hHH----HHHH
Confidence 8854321 0 00 00122 223346688888 9999965210 0 011 2222
Q ss_pred HHH--HHhcCCHHHHHHHHchhhhhhcCC-CC-------CCccEEEEe
Q 019093 277 AKV--FEEMGALDKLEAFTSFNGPDFYGL-PR-------NTSKIKLTK 314 (346)
Q Consensus 277 ~~~--~~~~~~l~~lv~~~s~nPAki~gl-~~-------kdAdlvi~d 314 (346)
++. .....+.++++++.+.|||+.+|+ ++ |.|||+|+|
T Consensus 331 ~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~~~G~i~~G~~AD~vvld 378 (406)
T PRK09356 331 MNMACTLFRLTPEEALAAVTINAARALGRQDTHGSLEVGKKADLVIWD 378 (406)
T ss_pred HHHHhhhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEC
Confidence 221 123458899999999999999998 33 289999999
No 75
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.06 E-value=4.3e-09 Score=102.83 Aligned_cols=71 Identities=11% Similarity=-0.062 Sum_probs=47.7
Q ss_pred eEEecCccccceecCCCc--------ccccccccc-----CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccE
Q 019093 2 ELTLTQPDDWHLHLRDGD--------LLKAVVPHS-----VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNF 68 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~--------~~ke~~~s~-----sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~ 68 (346)
++|+||+||+|+|...|. ...+++++. .+|+|+++.++.|.|+....+.++.+.+..+.. .+.++
T Consensus 49 ~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~--~a~~~ 126 (382)
T PRK11170 49 AILSPGFIDLQLNGCGGVQFNDTAEAISVETLEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKH--PNQAL 126 (382)
T ss_pred CEEccceeeeeecCccCcccccCccCCCHHHHHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcC--CCeEE
Confidence 479999999999964321 123455443 399999999998887666666666665544322 23688
Q ss_pred EEEEEE
Q 019093 69 TPLMTL 74 (346)
Q Consensus 69 ~~~~~~ 74 (346)
++|+-.
T Consensus 127 G~HlEG 132 (382)
T PRK11170 127 GLHLEG 132 (382)
T ss_pred EEEeec
Confidence 888653
No 76
>PRK14085 imidazolonepropionase; Provisional
Probab=99.02 E-value=3.6e-08 Score=96.45 Aligned_cols=160 Identities=14% Similarity=0.090 Sum_probs=94.5
Q ss_pred eeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEE
Q 019093 94 VFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVME 173 (346)
Q Consensus 94 v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~ 173 (346)
..-+|+|-.. +..+. +.+.++++.+++.|.++.+|+....- . ..+...+ . .|.. -+.
T Consensus 192 ~~~idi~~~~-------~~~~~-~~l~~~~~~a~~~g~~v~~H~~~~~~------~--~~v~~~~--~----~g~~-~i~ 248 (382)
T PRK14085 192 ARWIDVFCER-------GAFDE-DQSRRVLTAGRAAGLGLRVHGNQLGP------G--PGVRLAV--E----LGAA-SVD 248 (382)
T ss_pred CCeEEEEecC-------CCCCH-HHHHHHHHHHHHcCCCeEEEeCcccC------C--hHHHHHH--H----cCCC-cHH
Confidence 3456877521 11234 78999999999999999999974211 0 1122222 1 1321 244
Q ss_pred ccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCC
Q 019093 174 HIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAP 251 (346)
Q Consensus 174 HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP 251 (346)
|.+ +.+.+++++++ .+....||.+-+. . + .. .|| +.+.++.|..-. +|||+.|
T Consensus 249 H~~~l~~~~~~~la~~---gv~~~~~P~~~~~------~-~--~~---~~~---------~~~l~~aGv~v~-lgsD~~~ 303 (382)
T PRK14085 249 HCTYLTDADVDALAGS---GTVATLLPGAEFS------T-R--QP---YPD---------ARRLLDAGVTVA-LASDCNP 303 (382)
T ss_pred HhCCCCHHHHHHHHHc---CCEEEECcHHHHh------c-C--CC---Cch---------HHHHHHCCCcEE-EEeCCCC
Confidence 444 56777877764 3456678864221 0 0 00 122 444555687777 9999865
Q ss_pred CCccccccCCCCCCccchhHHHHHHHH--HHHhcCCHHHHHHHHchhhhhhcCCC-C------CCccEEEEec
Q 019093 252 HERGRKECACGCAGIYNAPVALSLYAK--VFEEMGALDKLEAFTSFNGPDFYGLP-R------NTSKIKLTKI 315 (346)
Q Consensus 252 ~~~~~K~~~~~~~G~~g~e~~lp~l~~--~~~~~~~l~~lv~~~s~nPAki~gl~-~------kdAdlvi~d~ 315 (346)
+..- + ..++.... ......+.++++++.+.|||+++|++ . +.|||+|+|.
T Consensus 304 ~~~~------------~--~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~~G~l~~G~~ADlvv~d~ 362 (382)
T PRK14085 304 GSSY------------T--SSMPFCVALAVRQMGMTPAEAVWAATAGGARALRRDDVGVLAVGARADLHVLDA 362 (382)
T ss_pred CCCh------------H--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCCCCcCCCCCCCEEEEcC
Confidence 4311 0 11222211 11224589999999999999999984 2 2899999993
No 77
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.00 E-value=4.8e-08 Score=89.86 Aligned_cols=252 Identities=15% Similarity=0.111 Sum_probs=132.6
Q ss_pred EEecCccccceecCC-Cccc--cccccccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCC---C-ccEEEEEEEE
Q 019093 3 LTLTQPDDWHLHLRD-GDLL--KAVVPHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPA---S-SNFTPLMTLY 75 (346)
Q Consensus 3 ~vlPG~ID~HvH~r~-g~~~--ke~~~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~---~-vd~~~~~~~~ 75 (346)
+|-||+||.|||+-- |.+. ..|-....-|+||+||--.+. ..|...|... .-+.+.. + .++++-+-..
T Consensus 54 ~VspG~iDlHvHvy~ggt~~~v~pd~~ga~~GvTTvVDAGSaG--aanf~gF~r~---vie~Sr~RI~Aflnvs~~Gl~a 128 (386)
T COG3964 54 IVSPGLIDLHVHVYYGGTEGGVRPDMYGAPNGVTTVVDAGSAG--AANFDGFYRT---VIEASRVRIKAFLNVSPPGLTA 128 (386)
T ss_pred EeccCeeeeeeEEecCCCccCcCHHHccccCCceEEEecCCcC--ccchhhHHHH---hhcchhheeeeeeeccCcceee
Confidence 689999999999865 3332 234344457999999975433 3344433333 2222220 1 2333321111
Q ss_pred eCCC-----CCHHHHHHHHHc--CCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhh
Q 019093 76 LTDT-----TSPDEIKLARKT--GVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFD 148 (346)
Q Consensus 76 ~~~~-----~~~~el~~l~~~--G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~ 148 (346)
.+.. ...+++.++.+. -.++|+|+-+.... .+..++. -+...++.++..++|+|+|-.++-- ..
T Consensus 129 ~nE~~d~~nid~d~i~aa~reh~d~ivGlKvR~s~~~-~g~~Git----Pl~la~~ia~~~klPlmvHigePp~----~~ 199 (386)
T COG3964 129 SNELYDPDNIDEDKIHAAFREHRDVIVGLKVRVSTED-IGEYGIT----PLTLALRIANDLKLPLMVHIGEPPV----LM 199 (386)
T ss_pred ehhhCChhhCCHHHHHHHHHhCcCcEEEEEEEeeecc-ccccCCc----hHHHHHHHHhhcCCceEEecCCCCc----cH
Confidence 1111 123355555542 34889999874321 1223443 3667888888999999999998642 11
Q ss_pred hHHHHHHHHHHHHHHhCCCCcEEEEccC----------CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceE
Q 019093 149 REKVFIDTILQPLIQRLPQLKVVMEHIT----------TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNY 218 (346)
Q Consensus 149 ~E~~av~~~l~~~la~~~g~~lhi~HvS----------t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k 218 (346)
.| ++ ...+.-+ .|.|+= ..+-...++++++--|-.++.- | +..+-
T Consensus 200 dE------vl--erL~~GD---IitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~gh-------------G-~asfs 254 (386)
T COG3964 200 DE------VL--ERLRRGD---IITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGH-------------G-RASFS 254 (386)
T ss_pred HH------HH--HhccCCc---eeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccC-------------C-cceee
Confidence 22 12 1111112 244432 1223344555542112222211 1 12332
Q ss_pred EeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHH-HHHHhcCCHHHHHHHHchhh
Q 019093 219 CLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNG 297 (346)
Q Consensus 219 ~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nP 297 (346)
++ --|.++-++|. -|+ |+||--.+++-. |=-+.|+..+ +++.-..+|+++++....||
T Consensus 255 f~------vAr~aia~Gll---P~~-ISSDlh~~~~~n-----------~Pv~dla~~mSKllalgmpl~~Vi~avT~np 313 (386)
T COG3964 255 FN------VARRAIANGLL---PDI-ISSDLHTITKLN-----------GPVYDLAWIMSKLLALGMPLTDVINAVTHNP 313 (386)
T ss_pred HH------HHHHHHhcCCC---cce-eeccceeeeecC-----------chHHHHHHHHHHHHHcCCcHHHHHHHHhcCH
Confidence 22 23444444432 256 899976664211 1112233322 33332348999999999999
Q ss_pred hhhcCCCCC-------CccEEEEe
Q 019093 298 PDFYGLPRN-------TSKIKLTK 314 (346)
Q Consensus 298 Aki~gl~~k-------dAdlvi~d 314 (346)
|..+||+.+ .||++||+
T Consensus 314 A~~i~l~~~gtLa~G~~aD~tvf~ 337 (386)
T COG3964 314 AVLIGLAEIGTLAPGAFADITVFK 337 (386)
T ss_pred HHHhCccccCccCCCcccceEEEE
Confidence 999999643 79999998
No 78
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=99.00 E-value=5.2e-08 Score=96.64 Aligned_cols=175 Identities=17% Similarity=0.116 Sum_probs=101.4
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCK 188 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~ak 188 (346)
+.+.++++.+++.|.++.+|+.... .|.+.+.. -++. .-....+.++.+.|.. +.+.+++++++
T Consensus 189 ~~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~- 260 (424)
T PRK08393 189 ALLKWVREKAREWNKLITIHLSETM-------DEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASA- 260 (424)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhc-
Confidence 7889999999999999999986432 11111110 0100 1123345666566655 67888888864
Q ss_pred CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093 189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 268 (346)
Q Consensus 189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g 268 (346)
.+++..||.. +..- +.+ .+|++ +.+..|. .+.+|||- +.+. ....-
T Consensus 261 --g~~v~~~P~s------n~~l-g~g-----~~~~~---------~~~~~Gv-~v~lGtD~-~~~~---------~~~d~ 306 (424)
T PRK08393 261 --GVTVAHNPAS------NMKL-GSG-----VMPLR---------KLLNAGV-NVALGTDG-AASN---------NNLDM 306 (424)
T ss_pred --CCEEEECHHH------HHhh-ccC-----CCCHH---------HHHHCCC-cEEEecCC-CccC---------CchhH
Confidence 4677889942 1110 111 23332 2334454 44489995 2210 00011
Q ss_pred h-hHHHHHHHHHHHhc----CCHHHHHHHHchhhhhhcCCCC------CCccEEEEe--cceeecCCccccCCccccc
Q 019093 269 A-PVALSLYAKVFEEM----GALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK--IPWKVPEAFSFSFGDIIPM 333 (346)
Q Consensus 269 ~-e~~lp~l~~~~~~~----~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d--~~~~v~~~~~~s~~~~sp~ 333 (346)
+ |..+..+....... .++++++++.+.|||+.+|++. +.|||+++| ..+.++..+..+...|+++
T Consensus 307 ~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~G~~ADlvvld~~~~~~~~~~~~~~~~~~~~~ 384 (424)
T PRK08393 307 LREMKLAALLHKVHNLDPTIADAETVFRMATQNGAKALGLKAGVIKEGYLADIAVIDFNRPHLRPINNPISHLVYSAN 384 (424)
T ss_pred HHHHHHHHHHHhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCCccCEEEEeCCCCCcCCCCChHHHeeeeCC
Confidence 1 23333332211111 2578999999999999999743 289999999 5566666667777777766
No 79
>PRK06687 chlorohydrolase; Validated
Probab=98.99 E-value=3e-08 Score=98.11 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=94.6
Q ss_pred EEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHHH--hCCCC
Q 019093 96 AVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLIQ--RLPQL 168 (346)
Q Consensus 96 ~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~la--~~~g~ 168 (346)
.+|+.++... ...+++ +.+.++++.+++.|.++.+|+..... |...+. +.++ .+. ...+-
T Consensus 180 ~i~~~~~~~~---~~~~s~--e~l~~~~~~A~~~g~~i~~H~~e~~~-------e~~~~~~~~g~~~~~-~l~~~g~l~~ 246 (419)
T PRK06687 180 NFKVMVAPHS---PYSCSR--DLLEASLEMAKELNIPLHVHVAETKE-------ESGIILKRYGKRPLA-FLEELGYLDH 246 (419)
T ss_pred ceEEEEeCCC---CCCCCH--HHHHHHHHHHHHcCCcEEEEeCCCHH-------HHHHHHHHHCcCHHH-HHHHcCCCCC
Confidence 4777765432 122333 78999999999999999999875421 111010 0110 121 22345
Q ss_pred cEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEee
Q 019093 169 KVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLG 246 (346)
Q Consensus 169 ~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~ 246 (346)
++.+.|.. +.+.++++++. | +.+-.||.. +... + .-.||++ +.+..|.-=. +|
T Consensus 247 ~~~~~H~~~~~~~~~~~la~~-g--~~v~~~P~s------n~~l-~-----~g~~p~~---------~~~~~Gv~v~-lG 301 (419)
T PRK06687 247 PSVFAHGVELNEREIERLASS-Q--VAIAHNPIS------NLKL-A-----SGIAPII---------QLQKAGVAVG-IA 301 (419)
T ss_pred CeEEEEEecCCHHHHHHHHHc-C--CeEEECcHH------hhhh-c-----cCCCcHH---------HHHHCCCeEE-Ee
Confidence 55666655 57778888764 3 444568842 1111 1 1124443 2344465455 89
Q ss_pred cCCCCCCccccccCCCCCCccchhH-HHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC--C------CccEEEE
Q 019093 247 TDSAPHERGRKECACGCAGIYNAPV-ALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR--N------TSKIKLT 313 (346)
Q Consensus 247 SDHaP~~~~~K~~~~~~~G~~g~e~-~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~--k------dAdlvi~ 313 (346)
||-.+-. .....++. .+..++..... ..+.+++.++.+.|||+.+|++. + .|||+++
T Consensus 302 tD~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~ 371 (419)
T PRK06687 302 TDSVASN----------NNLDMFEEGRTAALLQKMKSGDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVI 371 (419)
T ss_pred CCCCCCC----------CChhHHHHHHHHHHHhccccCCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEE
Confidence 9963210 01122222 22222221111 24688999999999999999842 2 7999999
Q ss_pred e
Q 019093 314 K 314 (346)
Q Consensus 314 d 314 (346)
|
T Consensus 372 d 372 (419)
T PRK06687 372 Q 372 (419)
T ss_pred C
Confidence 9
No 80
>PRK07572 cytosine deaminase; Validated
Probab=98.98 E-value=6e-08 Score=96.25 Aligned_cols=166 Identities=17% Similarity=0.156 Sum_probs=88.2
Q ss_pred HHHHHHHHHhHHcCCcEEEec-CCCCCCCChhhhHHHHHHHHHHHHHHhCCC--CcEEEEccCC---------HHHHHHH
Q 019093 117 GKCVHVLEEMVEQNMPLLVHG-EVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITT---------MDAVKFV 184 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHa-E~~~~~~~~~~~E~~av~~~l~~~la~~~g--~~lhi~HvSt---------~~~l~~i 184 (346)
+.+..+++.++++|+++.+|+ |..+. . ...+.+.. ......| .++.+.|... .+.++++
T Consensus 191 e~l~~~~~~A~~~g~~v~~H~~e~~~~---~----~~~~~~~~--~~~~~~G~~~~v~~~H~~~l~~~~~~~~~~~~~~l 261 (426)
T PRK07572 191 ESVRLLCEIAAERGLRVDMHCDESDDP---L----SRHIETLA--AETQRLGLQGRVAGSHLTSMHSMDNYYVSKLIPLM 261 (426)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCCCh---h----HHHHHHHH--HHHHHhCCCCCEEEEccchhhcCCHHHHHHHHHHH
Confidence 678999999999999999999 54321 0 11122222 1111222 2788888854 3457777
Q ss_pred HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093 185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA 264 (346)
Q Consensus 185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~ 264 (346)
+++ .++.=.||..-+. .. + .....|+-+.. ..+.+.++.|.-=. +|||...- +|...
T Consensus 262 a~~---g~~vv~~P~~n~~-----l~-~---~~~~~~~~~g~---~~v~~l~~~GV~v~-lGtD~~~~-------~~~~~ 318 (426)
T PRK07572 262 AEA---GVNAIANPLINIT-----LQ-G---RHDTYPKRRGM---TRVPELMAAGINVA-FGHDCVMD-------PWYSL 318 (426)
T ss_pred HHc---CCeEEECchhhhh-----hc-C---CCCCCCCCCCC---cCHHHHHHCCCcEE-EecCCCCC-------CCCCC
Confidence 765 3555677732111 00 0 00111211221 12445555675555 89998421 11112
Q ss_pred Cc-cchhHHHHHHHHH-HHhcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 265 GI-YNAPVALSLYAKV-FEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 265 G~-~g~e~~lp~l~~~-~~~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
|. .-+|...-.+... +.....+.++.++.+.||||++|++. |.|||+++|
T Consensus 319 ~~~~~~e~~~~~~~~~~~~~~~~l~~~l~~aT~~~A~~lgl~~~gi~~G~~ADlvl~d 376 (426)
T PRK07572 319 GSGDMLEVAHMGLHVAQMTGQDAMRACFDAVTVNPARIMGLEGYGLEPGCNADLVLLQ 376 (426)
T ss_pred CCCCHHHHHHHHHHHHcCCCHHHHHHHHHHhhcchHHhhCCCCcCCCCCCcCCEEEEe
Confidence 22 2223322111110 00011356788899999999999832 389999998
No 81
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=98.98 E-value=1.4e-07 Score=94.05 Aligned_cols=162 Identities=12% Similarity=0.104 Sum_probs=91.8
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHccC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESCK 188 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~ak 188 (346)
+.+.++++.+++.|.++.+|+.... ...+ .++.+ .++ .+. ...+.+..+.|.. +.+.++.+++.
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e~~-----~~~~-~~~~~~g~~~~~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~- 273 (443)
T PRK09045 202 ENLERIRTLAEQLDLPIHIHLHETA-----QEIA-DSLKQHGQRPLA-RLARLGLLGPRLIAVHMTQLTDAEIALLAET- 273 (443)
T ss_pred HHHHHHHHHHHHcCCCEEEeecCcH-----HHHH-HHHHHhCCCHHH-HHHHcCCCCCCeEEEEecCCCHHHHHHHHHc-
Confidence 7899999999999999999985321 0000 01111 010 111 2234455566665 46778887753
Q ss_pred CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093 189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 268 (346)
Q Consensus 189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g 268 (346)
.++.-.||.. .+.. + . -.+|+| +.+..|..-. +|||+.+...... +-
T Consensus 274 --g~~i~~~P~~------~~~~-~--~---~~~~~~---------~l~~~Gv~v~-lGtD~~~~~~~~~---------~~ 320 (443)
T PRK09045 274 --GCSVVHCPES------NLKL-A--S---GFCPVA---------KLLQAGVNVA-LGTDGAASNNDLD---------LF 320 (443)
T ss_pred --CCeEEECHHH------Hhhh-c--c---CCCcHH---------HHHHCCCeEE-EecCCCCCCCCcc---------HH
Confidence 3556678832 1110 1 0 012222 2344577777 9999864211000 11
Q ss_pred hhHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCC-CC-------CccEEEEe-cceee
Q 019093 269 APVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTK-IPWKV 319 (346)
Q Consensus 269 ~e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d-~~~~v 319 (346)
-|..+..++.... ...++++++++++.|||+.+|++ ++ .|||+|+| ..+..
T Consensus 321 ~~~~~a~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~ 384 (443)
T PRK09045 321 GEMRTAALLAKAVAGDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLET 384 (443)
T ss_pred HHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCc
Confidence 1444444332211 12478999999999999999984 21 79999999 54433
No 82
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=98.97 E-value=7.9e-08 Score=94.49 Aligned_cols=155 Identities=16% Similarity=0.096 Sum_probs=88.5
Q ss_pred HHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHHH-------HHH-HHHhCCCCcEEEEccC--CHHHHHHHH
Q 019093 117 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDTI-------LQP-LIQRLPQLKVVMEHIT--TMDAVKFVE 185 (346)
Q Consensus 117 ~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~~-------l~~-~la~~~g~~lhi~HvS--t~~~l~~i~ 185 (346)
+.|.++++.+++. |.++.+|+..... |...+.+. ++. .-....|.++.+.|.. +.+.+++++
T Consensus 186 e~l~~~~~~A~~~~g~~v~~H~~e~~~-------~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~~~~~~l~ 258 (401)
T TIGR02967 186 EQLAAAGELAKEYPDVYVQTHLSENKD-------EIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSDEECQRLA 258 (401)
T ss_pred HHHHHHHHHHHhCCCCeeEEEECCCch-------HHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCHHHHHHHH
Confidence 7899999999998 9999999853321 11111110 100 1122346677777777 566778777
Q ss_pred ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093 186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG 265 (346)
Q Consensus 186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G 265 (346)
+. .+.+-.||..- +.- + . -.||++ +.+..|.--. +|||..... .
T Consensus 259 ~~---g~~v~~~P~~~------~~~-~--~---g~~~~~---------~~~~~Gv~v~-lGtD~~~~~-----------~ 302 (401)
T TIGR02967 259 ET---GAAIAHCPTSN------LFL-G--S---GLFNLK---------KALEHGVRVG-LGTDVGGGT-----------S 302 (401)
T ss_pred Hc---CCeEEEChHHH------HHh-c--c---CCCCHH---------HHHHCCCeEE-EecCCCCCC-----------C
Confidence 63 45567888421 110 1 1 134432 2344575444 899963210 0
Q ss_pred ccchhH-HHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093 266 IYNAPV-ALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK 314 (346)
Q Consensus 266 ~~g~e~-~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d 314 (346)
..-++. .+-+.+....+ ..+..++.++.+.|||+.+|++. |.|||+|+|
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d 361 (401)
T TIGR02967 303 FSMLQTLREAYKVSQLQGARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLD 361 (401)
T ss_pred cCHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEc
Confidence 011121 11111111112 24788999999999999999852 279999998
No 83
>PRK05985 cytosine deaminase; Provisional
Probab=98.96 E-value=5.2e-08 Score=95.56 Aligned_cols=154 Identities=14% Similarity=0.115 Sum_probs=82.0
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC--cEEEEccCCH---------HHHHHHH
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTM---------DAVKFVE 185 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~--~lhi~HvSt~---------~~l~~i~ 185 (346)
+.|.++++.+++.|.++.+|+....- .....+.+.+ ..+...|. ++.+.|..+- +.+++++
T Consensus 191 ~~l~~~~~~A~~~g~~i~~Hv~e~~d------~~~~~~~~~~--e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~la 262 (391)
T PRK05985 191 GQLDIVFGLAERHGVGIDIHLHEPGE------LGAFQLERIA--ARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLA 262 (391)
T ss_pred HHHHHHHHHHHHhCCCcEEeeCCCCC------ccHHHHHHHH--HHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHH
Confidence 67899999999999999999753211 0011122333 22223343 5899998642 3456665
Q ss_pred ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093 186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG 265 (346)
Q Consensus 186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G 265 (346)
++ |..|. +|+. .+ .. -+| +-+.++.|.-=. +|||...- +|.+.|
T Consensus 263 e~-g~~v~--~~~~-----------~~--~~---~~~---------~~~l~~~Gv~v~-lGtD~~~~-------~~~p~~ 306 (391)
T PRK05985 263 EA-GVAIM--TNAP-----------GS--VP---VPP---------VAALRAAGVTVF-GGNDGIRD-------TWWPYG 306 (391)
T ss_pred Hc-CCeEE--EeCC-----------CC--CC---CCC---------HHHHHHCCCeEE-EecCCCCC-------CCcCCC
Confidence 54 34442 2220 00 00 122 223444566555 89997421 111212
Q ss_pred c-cchhHHHHHHH-HHHHhcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 266 I-YNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 266 ~-~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
- .-++...-+.. ..+.....++++.++.+.|||+.+|++. |.|||+++|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~lg~~~~~l~~G~~ADlvvld 363 (391)
T PRK05985 307 NGDMLERAMLIGYRSGFRTDDELAAALDCVTHGGARALGLEDYGLAVGARADFVLVD 363 (391)
T ss_pred CCcHHHHHHHHHHHHccCChHHHHHHHHHHcchhHHHhCCcccCCCCCCcCCEEEEC
Confidence 1 11222111111 1111111367899999999999998742 379999998
No 84
>PRK09230 cytosine deaminase; Provisional
Probab=98.96 E-value=1.2e-07 Score=94.17 Aligned_cols=168 Identities=13% Similarity=0.068 Sum_probs=90.3
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH---------HHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM---------DAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~---------~~l~~i~~a 187 (346)
+.+.++++.+++.|+++.+|+....-... ...+ ...+.+ ...-.+.++.+.|.... +.++++++
T Consensus 195 e~l~~~~~~A~~~g~~~~~H~~E~~~~~~-~~~~--~~~~~~---~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~La~- 267 (426)
T PRK09230 195 ESLHKAFALAQKYDRLIDVHCDEIDDEQS-RFVE--TVAALA---HREGMGARVTASHTTAMHSYNGAYTSRLFRLLKM- 267 (426)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCCCcch-HHHH--HHHHHH---HHhCCCCCEEEEecCchhcCCHHHHHHHHHHHHH-
Confidence 67899999999999999999864321000 0011 111222 11224668888887754 35666655
Q ss_pred CCCeeEEEccchh-hccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093 188 KEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI 266 (346)
Q Consensus 188 kg~~vt~Et~ph~-L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~ 266 (346)
..+.+..||.. +.|.. ...--|.-|.-.. +.+.++.|. .+-||||... ..|...|.
T Consensus 268 --~gv~vv~cP~sn~~l~~----------~~~~~p~~~g~~p---i~~l~~aGv-~V~lGTD~~~-------d~~~~~~~ 324 (426)
T PRK09230 268 --SGINFVANPLVNIHLQG----------RFDTYPKRRGITR---VKEMLEAGI-NVCFGHDDVF-------DPWYPLGT 324 (426)
T ss_pred --cCCeEEECcchhhhhcC----------CCCCCCCCCCCcC---HHHHHHCCC-eEEEecCCCC-------CCCcCCCC
Confidence 35778899953 22210 0101111111111 223444564 4448999631 12222243
Q ss_pred cchhHHHHHHHHHHHhc-C-CHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 267 YNAPVALSLYAKVFEEM-G-ALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 267 ~g~e~~lp~l~~~~~~~-~-~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
..+-..+.+.+...... . .++++.++.+.||||.+|++. |.|||++||
T Consensus 325 ~d~~~~~~~~~~~~~~~~~~~~~~~l~maT~~gA~alg~~~~gle~G~~ADlv~~~ 380 (426)
T PRK09230 325 ANMLQVLHMGLHVCQLMGYGQINDGLNLITTHSARTLNLQDYGIEVGNPANLIILP 380 (426)
T ss_pred CCHHHHHHHHHHHHhhCChhhHHHHHHHHhcchhHHhCCCCcCCCCCCcCCEEEEe
Confidence 33311122211111111 1 367899999999999999832 389999998
No 85
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=98.95 E-value=8.6e-08 Score=93.04 Aligned_cols=165 Identities=13% Similarity=0.107 Sum_probs=91.7
Q ss_pred HHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-HHHHHHHHccCCCeeEEEc
Q 019093 118 KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT-MDAVKFVESCKEGFVAATV 196 (346)
Q Consensus 118 ~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt-~~~l~~i~~akg~~vt~Et 196 (346)
.+..++..++ -..++.+||... ..+.+++ .+++..|.++.|.|... .+.++.+++ ..+.+-+
T Consensus 181 ~l~~l~~~~~-~~~~v~vHa~~~-----------~~i~~~l--~~~~e~g~~~~i~H~~~~~~~~~~la~---~gv~v~~ 243 (359)
T cd01309 181 KLEALLPVLK-GEIPVRIHAHRA-----------DDILTAI--RIAKEFGIKITIEHGAEGYKLADELAK---HGIPVIY 243 (359)
T ss_pred cHHHHHHHHc-CCeeEEEEeCCH-----------HHHHHHH--HHHHHcCCCEEEECchhHHHHHHHHHH---cCCCEEE
Confidence 3444444443 227899998753 2355666 57777799999999874 333444443 3455566
Q ss_pred cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccchhHHHHH
Q 019093 197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL 275 (346)
Q Consensus 197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~ 275 (346)
+|..-...... +.+. ....+-+.+..| ..-. ++||| |... .. .++.
T Consensus 244 ~P~~~~~~~~~--------------~~~~--~~~~~~~l~~aGGv~va-lgsD~-~~~~--------------~~-~l~~ 290 (359)
T cd01309 244 GPTLTLPKKVE--------------EVND--AIDTNAYLLKKGGVAFA-ISSDH-PVLN--------------IR-NLNL 290 (359)
T ss_pred CccccccccHH--------------Hhhc--chhhHHHHHHcCCceEE-EECCC-CCcc--------------ch-hHHH
Confidence 77532111100 0000 001122334456 6666 89999 3321 00 1222
Q ss_pred HHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe-cceeecCCccccCCcccccCCCcE
Q 019093 276 YAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK-IPWKVPEAFSFSFGDIIPMFAGNT 338 (346)
Q Consensus 276 l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d-~~~~v~~~~~~s~~~~sp~~~G~~ 338 (346)
....... ..+.++++++++.|||+++|+.. ++|||+||| .+... .++...+.. +|+.
T Consensus 291 ~~~~a~~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~-----~~~v~~v~i-~G~~ 357 (359)
T cd01309 291 EAAKAVKYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGDPLEP-----TSKPEQVYI-DGRL 357 (359)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCccCEEEECCCcccc-----cCcccEEEE-CCEE
Confidence 1222223 35889999999999999999942 279999999 54433 234555555 4543
No 86
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=98.92 E-value=1.3e-07 Score=95.53 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=88.8
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHHh--CCCCcEEEEccC--CH---------
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TM--------- 178 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la~--~~g~~lhi~HvS--t~--------- 178 (346)
+.|.++++.+++.|.++.+|+-... .|...+.+ .++ .+.+ ..+.++.+.|.. +.
T Consensus 221 e~l~~~~~~A~~~g~~v~~H~~e~~-------~~~~~~~~~~g~~~~~-~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~ 292 (488)
T PRK06151 221 DLLRRTAAAARELGCPVRLHCAQGV-------LEVETVRRLHGTTPLE-WLADVGLLGPRLLIPHATYISGSPRLNYSGG 292 (488)
T ss_pred HHHHHHHHHHHHCCCcEEEEECCch-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCcEEEEEEEcCCccccccCCH
Confidence 7899999999999999999994321 11111111 111 1221 234455555555 34
Q ss_pred HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccc
Q 019093 179 DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKE 258 (346)
Q Consensus 179 ~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~ 258 (346)
+.++++++. .+++-.||... .. ++. -.+|+ -+.++.|.-=. +|||..|...
T Consensus 293 ~~~~~la~~---g~~v~~~P~~~----~~-----~g~---~~~p~---------~~l~~~Gv~v~-lGtD~~~~~~---- 343 (488)
T PRK06151 293 DDLALLAEH---GVSIVHCPLVS----AR-----HGS---ALNSF---------DRYREAGINLA-LGTDTFPPDM---- 343 (488)
T ss_pred HHHHHHHhc---CCEEEECchhh----hh-----hcc---ccccH---------HHHHHCCCcEE-EECCCCCccH----
Confidence 778888764 35556788411 11 111 12333 23445565555 8999633110
Q ss_pred cCCCCCCccchhHHHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe-cceee
Q 019093 259 CACGCAGIYNAPVALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK-IPWKV 319 (346)
Q Consensus 259 ~~~~~~G~~g~e~~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d-~~~~v 319 (346)
+. +..+.+....... ..++++++++++.|||+++|++. + .|||+|+| ....+
T Consensus 344 -------~~--~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~~G~I~~G~~ADlvvld~~~~~~ 407 (488)
T PRK06151 344 -------VM--NMRVGLILGRVVEGDLDAASAADLFDAATLGGARALGRDDLGRLAPGAKADIVVFDLDGLHM 407 (488)
T ss_pred -------HH--HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCcCCEEEEeCCcccc
Confidence 00 1122222221221 24788999999999999999842 2 79999999 54444
No 87
>PRK08204 hypothetical protein; Provisional
Probab=98.87 E-value=5.9e-07 Score=89.64 Aligned_cols=155 Identities=15% Similarity=0.146 Sum_probs=89.8
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~ 194 (346)
+.+.++++.+++.|.++.+|+........ ...+..+. -+...+.++.|.|.+ +.+.++++++. .++.
T Consensus 201 e~l~~~~~~A~~~g~~v~~H~~e~~~~~~-----~~~~~~l~---~~g~~~~~~~i~H~~~~~~~~~~~la~~---g~~v 269 (449)
T PRK08204 201 EVARADFRLARELGLPISMHQGFGPWGAT-----PRGVEQLH---DAGLLGPDLNLVHGNDLSDDELKLLADS---GGSF 269 (449)
T ss_pred HHHHHHHHHHHHcCCcEEEEEcCCCcccC-----CCHHHHHH---HCCCCCCCeEEEecCCCCHHHHHHHHHc---CCCE
Confidence 67889999999999999999842211000 01121111 223456678888887 57778888753 3555
Q ss_pred EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093 195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS 274 (346)
Q Consensus 195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp 274 (346)
-.||.+-. + .+. -.||++ +.+..|.-=. +|||..+... +-+-.+..+.
T Consensus 270 ~~~P~~~~-----~----~g~---~~~~~~---------~~~~~Gv~v~-lGtD~~~~~~----------~~~~~~~~~a 317 (449)
T PRK08204 270 SVTPEIEM-----M----MGH---GYPVTG---------RLLAHGVRPS-LGVDVVTSTG----------GDMFTQMRFA 317 (449)
T ss_pred EEChHHHh-----h----hcC---CCCcHH---------HHHhcCCcee-eccccCCCCC----------cCHHHHHHHH
Confidence 67885321 1 111 124432 2344565555 8999754321 0000122222
Q ss_pred HHHHHH---------------HhcCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093 275 LYAKVF---------------EEMGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK 314 (346)
Q Consensus 275 ~l~~~~---------------~~~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d 314 (346)
+..... ....+..+..++.+.|+|+.+|+.. |.|||+|+|
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld 380 (449)
T PRK08204 318 LQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLID 380 (449)
T ss_pred HHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence 211110 0224678999999999999999832 279999999
No 88
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=98.86 E-value=5.9e-07 Score=89.46 Aligned_cols=156 Identities=13% Similarity=0.105 Sum_probs=92.6
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++++.+++.|+++.+|+.... .|...+.+ .++ .+. ...+.++.+.|.. +.+.++++++.
T Consensus 197 e~l~~~~~~A~~~g~~v~~H~~e~~-------~e~~~~~~~~g~~~~~-~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~ 268 (435)
T PRK15493 197 ELLEECARIAVENQTMVHIHLSETE-------REVRDIEAQYGKRPVE-YAASCGLFKRPTVIAHGVVLNDNERAFLAEH 268 (435)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCcEEEEeecCCHHHHHHHHHc
Confidence 7899999999999999999986432 11111111 111 122 2345677777766 67788888764
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+.+-.||..- +.- +.+ .+|++ +.+..|.-=. +|||..+-. .... .
T Consensus 269 ---g~~v~~~P~sn------~~l-~~g-----~~p~~---------~~~~~Gv~v~-lGtD~~~~~--------~~~d-~ 314 (435)
T PRK15493 269 ---DVRVAHNPNSN------LKL-GSG-----IANVK---------AMLEAGIKVG-IATDSVASN--------NNLD-M 314 (435)
T ss_pred ---CCeEEEChHHH------HHH-hcC-----cccHH---------HHHHCCCeEE-EccCccccC--------CCcC-H
Confidence 34556788641 110 111 24433 3344465445 899974310 0000 1
Q ss_pred chhHHHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093 268 NAPVALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK 314 (346)
Q Consensus 268 g~e~~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d 314 (346)
--|..++.++..... ..++++++++.+.|||+.+|++. +.|||+++|
T Consensus 315 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d 372 (435)
T PRK15493 315 FEEMRIATLLQKGIHQDATALPVETALTLATKGAAEVIGMKQTGSLEVGKCADFITID 372 (435)
T ss_pred HHHHHHHHHHHhhccCCCCcCCHHHHHHHHhHHHHHHcCCCCCCccCCCCcCCEEEEc
Confidence 124555555432211 24788999999999999999852 279999999
No 89
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=98.85 E-value=4.3e-07 Score=88.60 Aligned_cols=166 Identities=15% Similarity=0.085 Sum_probs=86.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC--CcEEEEccCCH---------HHHHHHH
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ--LKVVMEHITTM---------DAVKFVE 185 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g--~~lhi~HvSt~---------~~l~~i~ 185 (346)
+.+.++++.+++.|.++.+|+...... .. ..+.+.+ ..++..| .++.+.|.... +.+++++
T Consensus 189 e~l~~~~~~A~~~g~~v~~H~~e~~~~-~~-----~~~~~~~--~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~ 260 (398)
T cd01293 189 ESLDTLFELAQEHGLDIDLHLDETDDP-GS-----RTLEELA--EEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLA 260 (398)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCc-ch-----hHHHHHH--HHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHH
Confidence 678899999999999999998643210 00 1112223 2223333 36788887643 2355555
Q ss_pred ccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCC
Q 019093 186 SCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAG 265 (346)
Q Consensus 186 ~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G 265 (346)
+ ..+....||..-...... .. ..|. + .....+-+.++.|.-=. +|||..+- ++...|
T Consensus 261 ~---~g~~v~~~p~s~~~l~~~-~~--------~~~~-~--~~~~~~~~~~~~Gv~v~-lGTD~~~~-------~~~~~~ 317 (398)
T cd01293 261 E---AGISVVSLPPINLYLQGR-ED--------TTPK-R--RGVTPVKELRAAGVNVA-LGSDNVRD-------PWYPFG 317 (398)
T ss_pred H---cCCeEEeCCCcchhhccc-cc--------CCCC-C--CCCCcHHHHHHCCCeEE-ECCCCCCC-------CCcCCC
Confidence 4 345667788532211100 00 0111 0 11122444555676555 89998421 011111
Q ss_pred ccc-hhHHHHHHHHHH--HhcCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093 266 IYN-APVALSLYAKVF--EEMGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK 314 (346)
Q Consensus 266 ~~g-~e~~lp~l~~~~--~~~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d 314 (346)
... ++.+. +..... ....+.++..++.+.|+|+.+|+. .|.|||+++|
T Consensus 318 ~~~~~~~~~-~~~~~~~~~~~~~~~~al~~aT~~~A~~lg~~~G~l~~Gk~ADlv~~d 374 (398)
T cd01293 318 SGDMLEVAN-LAAHIAQLGTPEDLALALDLITGNAARALGLEDYGIKVGCPADLVLLD 374 (398)
T ss_pred CCCHHHHHH-HHHHHHcCCChhhHHHHHHhcChhhhhhcCCcCcccccCCcceEEEEC
Confidence 111 11111 111110 011134689999999999999962 2489999998
No 90
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.85 E-value=4.5e-08 Score=96.19 Aligned_cols=89 Identities=15% Similarity=0.217 Sum_probs=53.7
Q ss_pred HHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhc-CCHHHHHHHHchhhhhhcCCCC--------
Q 019093 235 AVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEM-GALDKLEAFTSFNGPDFYGLPR-------- 305 (346)
Q Consensus 235 al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~-~~l~~lv~~~s~nPAki~gl~~-------- 305 (346)
+++.|.-=+ ++|||-|-+. . ..+.+.....++. .+.++.++..+.|||+++|+..
T Consensus 302 l~~~GV~va-i~TD~~~~~~--------------~-~~l~~~m~l~~~~gmtp~EaL~a~T~naA~alG~~~~~Gsle~G 365 (406)
T COG1228 302 LIDAGVKVA-IGTDHNPGTS--------------H-GSLALEMALAVRLGMTPEEALKAATINAAKALGLADKVGSLEPG 365 (406)
T ss_pred HHHCCCEEE-EEcCCCCCch--------------h-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCccccccccCC
Confidence 455566666 9999966431 0 1233333333444 4888999999999999999853
Q ss_pred CCccEEEEe-ccee-ecCCccccCCcccccCCCcEEE
Q 019093 306 NTSKIKLTK-IPWK-VPEAFSFSFGDIIPMFAGNTLE 340 (346)
Q Consensus 306 kdAdlvi~d-~~~~-v~~~~~~s~~~~sp~~~G~~l~ 340 (346)
|+|||+||| .++. +.-..-.++..+... +|..+.
T Consensus 366 k~ADlvv~~~dp~~~i~y~~~~~~v~~v~k-~G~~~~ 401 (406)
T COG1228 366 KDADLVVWDGDPLADIPYFLGLNKVEAVIK-DGKVVY 401 (406)
T ss_pred CccCEEEEcCCChhhccccccCCceEEEEE-CCEEee
Confidence 399999998 3321 111112334445555 365543
No 91
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.84 E-value=2.2e-07 Score=84.84 Aligned_cols=233 Identities=18% Similarity=0.087 Sum_probs=116.0
Q ss_pred ccccceecCC-Ccc-c-ccccccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC--C
Q 019093 8 PDDWHLHLRD-GDL-L-KAVVPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT--S 81 (346)
Q Consensus 8 ~ID~HvH~r~-g~~-~-ke~~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~--~ 81 (346)
+||.|+|+.. ... . .+.+... .-|+++++.|... + +..+...+.+++ . .++....++ .|.. .
T Consensus 1 ~~D~H~H~~~~~~~~~~~~~l~~~~~~gv~~~v~~~~~-~-----~~~~~~~~la~~-~---~~i~~~~G~--hP~~~~~ 68 (251)
T cd01310 1 LIDTHCHLDFPQFDADRDDVLARAREAGVIKIIVVGTD-L-----KSSKRALELAKK-Y---DNVYAAVGL--HPHDADE 68 (251)
T ss_pred CEEeeeCCCchhhccCHHHHHHHHHHcCCCEEEEeCCC-H-----HHHHHHHHHHHh-C---CCeEEEEee--Ccchhhc
Confidence 5899999976 211 1 2222221 2578888888532 1 222233332222 1 233333333 4431 1
Q ss_pred -----HHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093 82 -----PDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID 155 (346)
Q Consensus 82 -----~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~ 155 (346)
.+++.+..+...+.++ ++-+.+......... +. ..++.+++.+++.|+||++||.... .
T Consensus 69 ~~~~~~~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~-q~-~~~~~~~~~a~e~~~pv~iH~~~~~-------------~ 133 (251)
T cd01310 69 HVDEDLDLLELLAANPKVVAIGEIGLDYYRDKSPREV-QK-EVFRAQLELAKELNLPVVIHSRDAH-------------E 133 (251)
T ss_pred CCHHHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHH-HH-HHHHHHHHHHHHhCCCeEEEeeCch-------------H
Confidence 3345555443225666 554321100000011 22 6788899999999999999998641 1
Q ss_pred HHHHHHHHhCCC-CcEEEEccCC--HHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHH
Q 019093 156 TILQPLIQRLPQ-LKVVMEHITT--MDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAV 232 (346)
Q Consensus 156 ~~l~~~la~~~g-~~lhi~HvSt--~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL 232 (346)
.++ .+++..+ .+..|.|..+ .+.++.+.+ .+++.++++-.+. +.......+
T Consensus 134 ~~~--~l~~~~~~~~~~i~H~~~~~~~~~~~~~~---~g~~~~~~~~~~~---------------------~~~~~~~~~ 187 (251)
T cd01310 134 DVL--EILKEYGPPKRGVFHCFSGSAEEAKELLD---LGFYISISGIVTF---------------------KNANELREV 187 (251)
T ss_pred HHH--HHHHhcCCCCCEEEEccCCCHHHHHHHHH---cCCEEEeeeeecc---------------------CCCHHHHHH
Confidence 233 3333333 3344556553 233333332 3456666552110 011112223
Q ss_pred HHHHHcCCcc-EEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcC
Q 019093 233 VSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYG 302 (346)
Q Consensus 233 ~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~g 302 (346)
++.+-.| ++++||+ |.....+.. |-.+....++-++..+. ...+.+.+.+++..||+|+||
T Consensus 188 ---~~~~~~dril~~TD~-p~~~~~~~~-----~~~~~~~~~~~~~~~la~~~gl~~e~~~~~~~~N~~~ll~ 251 (251)
T cd01310 188 ---VKEIPLERLLLETDS-PYLAPVPFR-----GKRNEPAYVKHVAEKIAELKGISVEEVAEVTTENAKRLFG 251 (251)
T ss_pred ---HHhCChHHEEEcccC-CCCCCCCCC-----CCCCCChhHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhC
Confidence 3333334 3389998 654332211 11233344665554433 334889999999999999987
No 92
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=98.78 E-value=1.2e-07 Score=95.36 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=101.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESCKEGFV 192 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~akg~~v 192 (346)
+.+.++++.+++.|.++.+||..... ...+-+.++....+ ..+++..|.|.+ +.+.++.+++ ..+
T Consensus 295 e~l~~~~~~a~~~g~~v~~Ha~gd~~--------i~~~l~~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~---~gv 363 (479)
T cd01300 295 EELEELVRAADEAGLQVAIHAIGDRA--------VDTVLDALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAK---LGV 363 (479)
T ss_pred HHHHHHHHHHHHCCCCEEEEEecHHH--------HHHHHHHHHHHHHhcCCCCCCceeeecccCCHHHHHHHHH---cCC
Confidence 78999999999999999999985421 00111111101112 236789999998 5666776665 357
Q ss_pred EEEccchhhccchhhhccCCCC-CceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093 193 AATVTPQHLVLNRNALFQGGLR-PHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV 271 (346)
Q Consensus 193 t~Et~ph~L~l~~~~~~~~~~~-~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~ 271 (346)
.+++||+|+++..+.......+ .+.+..||+| +.+..|...+ ++||+.+.. .+ ++ .+++.
T Consensus 364 ~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~---------~~~~~Gv~v~-lGSD~~~~~-~~---p~-----~~~~~ 424 (479)
T cd01300 364 IASVQPNHLYSDGDAAEDRRLGEERAKRSYPFR---------SLLDAGVPVA-LGSDAPVAP-PD---PL-----LGIWA 424 (479)
T ss_pred ceEeCcccccCchHHHHHhcccHHHHhcCchHH---------HHHHCCCeee-ccCCCCCCC-CC---HH-----HHHHH
Confidence 8899999998765543210011 2345566655 4566788888 899994332 11 10 11111
Q ss_pred HHHHH-HH-----HHHhcCCHHHHHHHHchhhhhhcCCC-C-------CCccEEE
Q 019093 272 ALSLY-AK-----VFEEMGALDKLEAFTSFNGPDFYGLP-R-------NTSKIKL 312 (346)
Q Consensus 272 ~lp~l-~~-----~~~~~~~l~~lv~~~s~nPAki~gl~-~-------kdAdlvi 312 (346)
.+... .. .-.+..++++++++.+.|||+.+|+. + |.|||+|
T Consensus 425 av~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 425 AVTRKTPGGGVLGNPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred HheeeCCCCCCCCCccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 11100 00 01224589999999999999999983 3 1799875
No 93
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=98.77 E-value=1.2e-06 Score=87.40 Aligned_cols=151 Identities=10% Similarity=0.042 Sum_probs=89.2
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++.+.+++.|+++.+|.-.... |...+.+ .++ .+. ...+.++.+.|.. +.+.++++++.
T Consensus 205 ~~l~~~~~lA~~~g~~i~~H~~E~~~-------e~~~~~~~~g~~~v~-~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~ 276 (442)
T PRK07203 205 ATLEKCREAVKETGRGYHIHVAEGIY-------DVSDSHKKYGKDIVE-RLADFGLLGEKTLAAHCIYLSDEEIDLLKET 276 (442)
T ss_pred HHHHHHHHHHHHcCCcEEEEecCChH-------HHHHHHHHcCCCHHH-HHHhCCCCCCCcEEEEeecCCHHHHHHHHhc
Confidence 67888999999999999999875421 1111111 111 122 2356777777766 66778888864
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+.+-.||. ++..- + . -.||+ ++.+..|.-=. +|||-... .
T Consensus 277 ---g~~v~~~P~------sn~~l-~--~---g~~p~---------~~~~~~Gv~v~-lGtD~~~~--------------d 317 (442)
T PRK07203 277 ---DTFVVHNPE------SNMGN-A--V---GYNPV---------LEMIKNGILLG-LGTDGYTS--------------D 317 (442)
T ss_pred ---CCeEEECch------hhhhc-c--c---CCCCH---------HHHHHCCCeEE-EcCCCCCc--------------c
Confidence 356677994 22211 1 1 12443 34555676655 89995211 0
Q ss_pred ch-hHHHHHHHHHHHhcC---CHHHHHHHHchhhhhhcC--CC-C-------CCccEEEEe
Q 019093 268 NA-PVALSLYAKVFEEMG---ALDKLEAFTSFNGPDFYG--LP-R-------NTSKIKLTK 314 (346)
Q Consensus 268 g~-e~~lp~l~~~~~~~~---~l~~lv~~~s~nPAki~g--l~-~-------kdAdlvi~d 314 (346)
-+ |..+..+........ +++++.++...|+||.+| +. + |.|||+++|
T Consensus 318 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d 378 (442)
T PRK07203 318 MFESYKVANFKHKHAGGDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVD 378 (442)
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEc
Confidence 01 333433332211111 367888999999999988 32 1 289999999
No 94
>PRK07213 chlorohydrolase; Provisional
Probab=98.75 E-value=1.6e-06 Score=84.60 Aligned_cols=150 Identities=14% Similarity=0.144 Sum_probs=85.6
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH-HHH----HHHHHHHhCCCCc-EEEEccC--CHHHHHHHHccC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF-IDT----ILQPLIQRLPQLK-VVMEHIT--TMDAVKFVESCK 188 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a-v~~----~l~~~la~~~g~~-lhi~HvS--t~~~l~~i~~ak 188 (346)
+.+.++++.+++.|.++.+|+..... |... ..+ -+ ..+...|.. -.+.|.. +.+.++++++.
T Consensus 179 ~~l~~~~~~A~~~g~~v~~H~~e~~~-------e~~~~~~~~G~~~v--~~~~~~G~~~~~i~H~~~~~~~~i~~la~~- 248 (375)
T PRK07213 179 EELKFICKECKREKKIFSIHAAEHKG-------SVEYSLEKYGMTEI--ERLINLGFKPDFIVHATHPSNDDLELLKEN- 248 (375)
T ss_pred HHHHHHHHHHHHcCCEEEEeeCCchh-------HHHHHHHHcCCChH--HHHHhcCCCCCEEEECCCCCHHHHHHHHHc-
Confidence 78899999999999999999964321 1100 000 01 122223433 1256655 56678888764
Q ss_pred CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccc
Q 019093 189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYN 268 (346)
Q Consensus 189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g 268 (346)
.+++..||.. ... ++. -.||+ .+.++.|. .+-+|||..+.. .+-.-
T Consensus 249 --g~~v~~~P~s------n~~---l~~---g~~~v---------~~l~~~Gv-~v~lGTD~~~~~----------~~~~~ 294 (375)
T PRK07213 249 --NIPVVVCPRA------NAS---FNV---GLPPL---------NEMLEKGI-LLGIGTDNFMAN----------SPSIF 294 (375)
T ss_pred --CCcEEECCcc------hhh---hcc---CCccH---------HHHHHCCC-EEEEeeCCCCCc----------hHhHH
Confidence 4667889941 111 011 12443 34455565 444899975421 00000
Q ss_pred hhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC-------CCccEEEEe
Q 019093 269 APVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR-------NTSKIKLTK 314 (346)
Q Consensus 269 ~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~-------kdAdlvi~d 314 (346)
-|..+ ++. ....+..++.++.+.|+|+.+|++. +.|||+++|
T Consensus 295 ~e~~~--~~~--~~~~~~~~~l~~aT~~gA~~lg~~~~G~l~~G~~ADlvv~d 343 (375)
T PRK07213 295 REMEF--IYK--LYHIEPKEILKMATINGAKILGLINVGLIEEGFKADFTFIK 343 (375)
T ss_pred HHHHH--HHH--HhCcCHHHHHHHHHHHHHHHhCCCCcCCcCCCCcccEEEEc
Confidence 11111 111 1235788999999999999998732 279999999
No 95
>PRK12393 amidohydrolase; Provisional
Probab=98.75 E-value=1.9e-06 Score=86.37 Aligned_cols=154 Identities=13% Similarity=0.111 Sum_probs=87.4
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++++.+++.|.++.+|+.... .|.+...+ -++ .+. ...+.++.+.|.. +.+.++++++.
T Consensus 218 e~l~~~~~~a~~~g~~~~~H~~e~~-------~~~~~~~~~~g~~~~~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~ 289 (457)
T PRK12393 218 ELLREVARAARGMGLRLHSHLSETV-------DYVDFCREKYGMTPVQ-FVAEHDWLGPDVWFAHLVKLDAEEIALLAQT 289 (457)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCH-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHHc
Confidence 6788999999999999999996321 11111100 010 111 2235565555554 57788888764
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+.+-.||.. ... ++. -.||+| +.+..|.-=. +|||..+.. +..
T Consensus 290 ---g~~v~~~P~s------n~~---lg~---g~~~~~---------~~~~~Gv~v~-lGtD~~~~~-----------~~~ 333 (457)
T PRK12393 290 ---GTGIAHCPQS------NGR---LGS---GIAPAL---------AMEAAGVPVS-LGVDGAASN-----------ESA 333 (457)
T ss_pred ---CCeEEECchh------hhh---hcc---cCCCHH---------HHHHCCCeEE-EecCCcccC-----------CCc
Confidence 4666788842 111 111 124433 3444565445 899964311 001
Q ss_pred ch--hHHHHHHHHHHH---hcCCHHHHHHHHchhhhhhcCCCC-C------CccEEEEe
Q 019093 268 NA--PVALSLYAKVFE---EMGALDKLEAFTSFNGPDFYGLPR-N------TSKIKLTK 314 (346)
Q Consensus 268 g~--e~~lp~l~~~~~---~~~~l~~lv~~~s~nPAki~gl~~-k------dAdlvi~d 314 (346)
.. +..+..+..... ...++++++++++.|||+++|++. + .|||+|+|
T Consensus 334 d~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~l~~~~~G~l~~G~~ADlvv~d 392 (457)
T PRK12393 334 DMLSEAHAAWLLHRAEGGADATTVEDVVHWGTAGGARVLGLDAIGTLAVGQAADLAIYD 392 (457)
T ss_pred cHHHHHHHHHHHhhhcCCCCCCCHHHHHHHHhHHHHHHhCCCCCCCcCCCCcCCEEEEe
Confidence 11 111222211110 124788999999999999999842 2 79999999
No 96
>PRK09228 guanine deaminase; Provisional
Probab=98.66 E-value=5.6e-06 Score=82.42 Aligned_cols=154 Identities=16% Similarity=0.099 Sum_probs=91.0
Q ss_pred HHHHHHHHHhHHc-CCcEEEecCCCCCCCChhhhHHHHHHH-------HHHHHHH--hCCCCcEEEEccC--CHHHHHHH
Q 019093 117 GKCVHVLEEMVEQ-NMPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV 184 (346)
Q Consensus 117 ~~l~~~l~~~~~~-g~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~~la--~~~g~~lhi~HvS--t~~~l~~i 184 (346)
+.+.++.+.++++ |.++.+|...... |...+.+ .++ .+. ...+.++.+.|.. +.+.++++
T Consensus 211 ~~l~~~~~lA~~~~~~~i~~Hl~E~~~-------e~~~~~~~~g~~~~~~~-~l~~~G~l~~~~~~~H~~~l~~~~~~~l 282 (433)
T PRK09228 211 EQLEAAGALAREHPDVWIQTHLSENLD-------EIAWVKELFPEARDYLD-VYERYGLLGPRAVFAHCIHLEDRERRRL 282 (433)
T ss_pred HHHHHHHHHHHHCCCCceEEeecCChh-------HHHHHHHHcCCCCCHHH-HHHHcCCCCCCeEEEeccCCCHHHHHHH
Confidence 6788999999997 9999999875421 1111111 111 122 2246688888887 67778888
Q ss_pred HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093 185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA 264 (346)
Q Consensus 185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~ 264 (346)
++. .+.+..||.. .+.- +.+ .+|+ .+.++.|.--. +|||..+-.
T Consensus 283 a~~---g~~v~~~P~s------n~~l-g~g-----~~~~---------~~~~~~Gv~v~-lGtD~~~~~----------- 326 (433)
T PRK09228 283 AET---GAAIAFCPTS------NLFL-GSG-----LFDL---------KRADAAGVRVG-LGTDVGGGT----------- 326 (433)
T ss_pred HHc---CCeEEECCcc------HHhh-cCC-----CcCH---------HHHHHCCCeEE-EecCCCCCC-----------
Confidence 764 4566788852 1110 111 2333 34555686566 899963210
Q ss_pred Cccchh-HHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093 265 GIYNAP-VALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK 314 (346)
Q Consensus 265 G~~g~e-~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d 314 (346)
...-++ ..+......... ..+.++++++.+.|||+++|++. |.|||+++|
T Consensus 327 ~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv~d 386 (433)
T PRK09228 327 SFSMLQTMNEAYKVQQLQGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVVLD 386 (433)
T ss_pred CCCHHHHHHHHHHHhhcccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEEEc
Confidence 001111 112111211112 23788999999999999999842 279999999
No 97
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=98.64 E-value=9.5e-06 Score=80.39 Aligned_cols=151 Identities=15% Similarity=0.095 Sum_probs=89.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++++.+++ |.++.+|+.+.. .|...+. +-++ .+++ ..+.++.+.|.. +.+.++++++.
T Consensus 207 e~l~~~~~~a~~-g~~i~~H~~e~~-------~e~~~~~~~~g~~~i~-~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~ 277 (418)
T cd01313 207 EQLAALAALASE-KAPVHIHLAEQP-------KEVDDCLAAHGRRPVE-LLLDHGHLDARWCLVHATHLTDNETLLLGRS 277 (418)
T ss_pred HHHHHHHHHHhc-CCceEEEeCCCH-------HHHHHHHHHcCCCHHH-HHHHcCCCCCCEEEEeCCCCCHHHHHHHHHc
Confidence 789999999999 999999994321 1111111 1111 2222 356777888877 67788888864
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+++-.||..-+. .+. -.||+| +.+..|.-=. +|||- +.+ ..
T Consensus 278 ---g~~v~~~P~sn~~---------lg~---g~~p~~---------~l~~~Gv~v~-lGtD~-~~~------------~d 319 (418)
T cd01313 278 ---GAVVGLCPTTEAN---------LGD---GIFPAA---------ALLAAGGRIG-IGSDS-NAR------------ID 319 (418)
T ss_pred ---CCEEEECCCchhh---------ccC---CCCCHH---------HHHHCCCcEE-EecCC-CCC------------cC
Confidence 4677789953211 111 125544 2344565455 89993 211 11
Q ss_pred chhHHHHH-H-HHHHH---------hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 268 NAPVALSL-Y-AKVFE---------EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 268 g~e~~lp~-l-~~~~~---------~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
-++.+..+ + ..... ...+..++.++.+.|+|+.+|++. |.|||+++|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~~Gsle~Gk~ADlvvld 383 (418)
T cd01313 320 LLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLATGALEAGARADLLSLD 383 (418)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCCCCeECCCCccCEEEEc
Confidence 12222211 1 11111 134788999999999999999742 379999999
No 98
>PRK06846 putative deaminase; Validated
Probab=98.63 E-value=5.3e-06 Score=81.96 Aligned_cols=23 Identities=13% Similarity=0.010 Sum_probs=20.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEV 139 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~ 139 (346)
+.+.++++.++++|+++.+|.-.
T Consensus 206 ~~l~~~~~lA~~~g~~v~~Hv~e 228 (410)
T PRK06846 206 KSLDTMFQIAVDFNKGVDIHLHD 228 (410)
T ss_pred HHHHHHHHHHHHhCCCcEEEECC
Confidence 67899999999999999999764
No 99
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=98.62 E-value=1.1e-05 Score=80.17 Aligned_cols=154 Identities=14% Similarity=0.106 Sum_probs=89.2
Q ss_pred HHHHHHHHHhHHcC-CcEEEecCCCCCCCChhhhHHHHHHH-------HHHHHHH--hCCCCcEEEEccC--CHHHHHHH
Q 019093 117 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDT-------ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFV 184 (346)
Q Consensus 117 ~~l~~~l~~~~~~g-~~v~vHaE~~~~~~~~~~~E~~av~~-------~l~~~la--~~~g~~lhi~HvS--t~~~l~~i 184 (346)
+.+.++++.+++.| .++.+|+.... .|.+.+.+ .++ .+. ...|.++.+.|.. +.+.++++
T Consensus 208 e~l~~~~~~A~~~g~~~v~~H~~e~~-------~e~~~~~~~~g~~~~p~~-~l~~~G~l~~~~~l~H~~~l~~~~~~~l 279 (429)
T cd01303 208 ELLAALGKLAKEHPDLHIQTHISENL-------DEIAWVKELFPGARDYLD-VYDKYGLLTEKTVLAHCVHLSEEEFNLL 279 (429)
T ss_pred HHHHHHHHHHHHCCCCeEEEeeCCCH-------HHHHHHHHHcCCCCCHHH-HHHHCCCCCCCcEEEeCCCCCHHHHHHH
Confidence 78999999999999 99999985321 11111111 111 122 2335678888877 56778888
Q ss_pred HccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCC
Q 019093 185 ESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCA 264 (346)
Q Consensus 185 ~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~ 264 (346)
++. .+.+-.||..- +. ++. -.+|+ .+.+..|.--. +|||..+-.
T Consensus 280 ~~~---g~~v~~~P~sn------~~---l~~---g~~~~---------~~~~~~Gv~v~-lGtD~~~~~----------- 323 (429)
T cd01303 280 KER---GASVAHCPTSN------LF---LGS---GLFDV---------RKLLDAGIKVG-LGTDVGGGT----------- 323 (429)
T ss_pred HHc---CCEEEECccch------hh---hcc---CCCCH---------HHHHHCCCeEE-EeccCCCCC-----------
Confidence 764 45666788421 11 010 12333 34555566555 899974210
Q ss_pred Cccch-hHHHHHHHHHHHh-------cCCHHHHHHHHchhhhhhcCCCC--------CCccEEEEe
Q 019093 265 GIYNA-PVALSLYAKVFEE-------MGALDKLEAFTSFNGPDFYGLPR--------NTSKIKLTK 314 (346)
Q Consensus 265 G~~g~-e~~lp~l~~~~~~-------~~~l~~lv~~~s~nPAki~gl~~--------kdAdlvi~d 314 (346)
...-+ +..+-........ ..+.+++.++.+.||||.+|++. |.|||+|+|
T Consensus 324 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld 389 (429)
T cd01303 324 SFSMLDTLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVID 389 (429)
T ss_pred CccHHHHHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEc
Confidence 00001 1111111111111 13678999999999999999842 279999999
No 100
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=98.59 E-value=5.4e-06 Score=82.70 Aligned_cols=162 Identities=11% Similarity=0.049 Sum_probs=90.3
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----HHHHHHH--HhCCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----TILQPLI--QRLPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----~~l~~~l--a~~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
..+.++.+.+++.|+++.+|+-... .|...+. +.++ .+ ....+.++.+.|.. +.+.++++++.
T Consensus 204 ~~l~~~~~lA~~~~~~i~~H~~E~~-------~e~~~~~~~~g~~~~~-~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~ 275 (441)
T TIGR03314 204 AGLEMCREAVQATGRGFHIHVAEDI-------YDVEDSHHKYGKDIVE-RLADFGLLGSKTLAAHCIYLSDREIELLNET 275 (441)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCH-------HHHHHHHHHcCCCHHH-HHHHCCCCCCCeEEEEEecCCHHHHHHHHHc
Confidence 6788889999999999999987532 1111110 1111 11 12446677667765 67788888874
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+++=.||- ++..- + . --||++ +.+..|. .+-||||-.+...
T Consensus 276 ---g~~v~~cP~------sn~~l-~--~---G~~p~~---------~~~~~Gv-~v~LGtD~~~~d~------------- 317 (441)
T TIGR03314 276 ---DTFVVHNPE------SNMGN-A--V---GYNPVL---------RMFKNGI-LLGLGTDGYTSDM------------- 317 (441)
T ss_pred ---CCcEEECHH------HHhhh-c--c---CCCCHH---------HHHHCCC-EEEEcCCCCCcCH-------------
Confidence 355667883 22211 1 1 125544 3344464 4448999632110
Q ss_pred chhHHHHHHHHHHHhcC---CHHHHHHHHchhhhhhcC---------C-CCCCccEEEEe--cceeecCCcc
Q 019093 268 NAPVALSLYAKVFEEMG---ALDKLEAFTSFNGPDFYG---------L-PRNTSKIKLTK--IPWKVPEAFS 324 (346)
Q Consensus 268 g~e~~lp~l~~~~~~~~---~l~~lv~~~s~nPAki~g---------l-~~kdAdlvi~d--~~~~v~~~~~ 324 (346)
--|..+.++........ .+.++.++...|.|+.+| | +.+.|||+++| ..|.++..++
T Consensus 318 ~~em~~a~~~~~~~~~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~~~~~~~~~~~~ 389 (441)
T TIGR03314 318 FESLKFANFKHKDAGGDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDYNAPTPLTADNI 389 (441)
T ss_pred HHHHHHHHHHhccccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcCCCCeeechhhc
Confidence 01233333322111111 245777888889998764 2 22389999999 5666654443
No 101
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=98.58 E-value=1.9e-05 Score=77.39 Aligned_cols=155 Identities=14% Similarity=0.176 Sum_probs=87.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH-----------------------HHHHHHH--HhCCCCcEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID-----------------------TILQPLI--QRLPQLKVV 171 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~-----------------------~~l~~~l--a~~~g~~lh 171 (346)
+.+.++.+.+++.|.++.+|..... .|...+. +-++ .+ ....+.++.
T Consensus 163 e~l~~~~~lA~~~g~~i~~Hl~E~~-------~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~-~l~~~g~L~~~~~ 234 (381)
T cd01312 163 ELAQDLIDLAKKLNLPLSTHFLESK-------EEREWLEESKGWFKHFWESFLKLPKPKKLATAID-FLDMLGGLGTRVS 234 (381)
T ss_pred HHHHHHHHHHHHcCCeEEEEecCcH-------HHHHHHHHhccchhhHhhhhcccccccCCCCHHH-HHHHcCCCCCCcE
Confidence 6788899999999999999976431 1111110 0111 12 224466888
Q ss_pred EEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCC
Q 019093 172 MEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDS 249 (346)
Q Consensus 172 i~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDH 249 (346)
+.|.. +.+.++++++. .+.+-.||.. +.. .+.. .+|++ +.+..|.-=. +|||.
T Consensus 235 ~~H~~~l~~~~~~~l~~~---g~~v~~~P~s------n~~---lg~g---~~p~~---------~~~~~Gv~v~-lGtD~ 289 (381)
T cd01312 235 FVHCVYANLEEAEILASR---GASIALCPRS------NRL---LNGG---KLDVS---------ELKKAGIPVS-LGTDG 289 (381)
T ss_pred EEECCcCCHHHHHHHHHc---CCeEEECcch------hhh---hcCC---CcCHH---------HHHHCCCcEE-EeCCC
Confidence 88876 56778888764 4667788941 111 1111 14433 3455575555 89995
Q ss_pred CCCCccccccCCCCCCccch-hHHHHHHHHHHHh-cCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093 250 APHERGRKECACGCAGIYNA-PVALSLYAKVFEE-MGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK 314 (346)
Q Consensus 250 aP~~~~~K~~~~~~~G~~g~-e~~lp~l~~~~~~-~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d 314 (346)
.+-. ....-+ |..+-........ ..+..++.++.+.|+|+.+|++ .|.|||+++|
T Consensus 290 ~~~~----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~Gsle~Gk~ADlvv~d 352 (381)
T cd01312 290 LSSN----------ISLSLLDELRALLDLHPEEDLLELASELLLMATLGGARALGLNNGEIEAGKRADFAVFE 352 (381)
T ss_pred CccC----------CCCCHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHHHhCCCCCccCCCCcccEEEEe
Confidence 3210 011111 1111111110000 1356789999999999999973 2389999999
No 102
>PRK06380 metal-dependent hydrolase; Provisional
Probab=98.51 E-value=2.7e-05 Score=76.99 Aligned_cols=161 Identities=12% Similarity=0.107 Sum_probs=87.7
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChh-hhHHHHHHHHHHH-HHHhCCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIF-DREKVFIDTILQP-LIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFV 192 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~-~~E~~av~~~l~~-~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~v 192 (346)
+.+.++++.+++.|.++.+|+....- ... ..+..-. +.++- .-....+.++.+.|.. +.+.++++++. .+
T Consensus 186 e~l~~~~~~A~~~g~~v~~H~~e~~~--~~~~~~~~~g~-~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~---g~ 259 (418)
T PRK06380 186 ETYLKAKEIAEKYDTIMHMHLSETRK--EVYDHVKRTGE-RPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKN---GV 259 (418)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcHH--HHHHHHHHhCC-CHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHc---CC
Confidence 78999999999999999999976421 000 0000000 00100 1112234565566655 56778888764 46
Q ss_pred EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-hH
Q 019093 193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PV 271 (346)
Q Consensus 193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~ 271 (346)
.+-.||... .. .+. .-.||+| +.+..|.-=. +|||-.... ....-+ +.
T Consensus 260 ~v~~~P~sn------~~---l~~--~g~~p~~---------~~~~~Gv~v~-lGTD~~~~~----------~~~d~~~~~ 308 (418)
T PRK06380 260 KVSWNSVSN------FK---LGT--GGSPPIP---------EMLDNGINVT-IGTDSNGSN----------NSLDMFEAM 308 (418)
T ss_pred EEEECHHHH------Hh---hcc--CCCCcHH---------HHHHCCCeEE-EcCCCCcCC----------CCcCHHHHH
Confidence 778889631 11 011 0123433 4455564444 899952110 000111 12
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 272 ALSLYAKVFEE----MGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 272 ~lp~l~~~~~~----~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
.+.+++..... ..+..++.++.+.|+||.+|+.. |.|||+++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~~lg~~~G~l~~G~~ADlvv~d 361 (418)
T PRK06380 309 KFSALSVKNERWDASIIKAQEILDFATINAAKALELNAGSIEVGKLADLVILD 361 (418)
T ss_pred HHHHHHhhhccCCCCcCCHHHHHHHHHHHHHHHhCCCCCccCCCccCCEEEEe
Confidence 22222111111 13678999999999999999732 389999999
No 103
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=98.44 E-value=8.2e-05 Score=74.54 Aligned_cols=156 Identities=14% Similarity=0.064 Sum_probs=86.1
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccC--CHHHHHHHHccCCCee
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESCKEGFV 192 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~akg~~v 192 (346)
+.+.++++.+ +.|.++.+|+.+... ....+....-.+.++ .+++ ..+.++.+.|.. +.+.++++++. .+
T Consensus 216 e~l~~~~~~A-~~g~~i~~H~~e~~~--e~~~~~~~~g~~~~~-~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~---g~ 288 (456)
T PRK09229 216 DQLAAVLALA-APDGPVHIHIAEQTK--EVDDCLAWSGARPVE-WLLDHAPVDARWCLVHATHLTDAETARLARS---GA 288 (456)
T ss_pred HHHHHHHHHh-cCCCceEEEeCCCHH--HHHHHHHHcCCCHHH-HHHHcCCCCCCeEEEeeccCCHHHHHHHHHc---CC
Confidence 7899999999 999999999953211 000000000000111 1222 345676677766 66778888764 46
Q ss_pred EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHH
Q 019093 193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVA 272 (346)
Q Consensus 193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~ 272 (346)
++-.||.. ... .+. -.+|+| +.+..|.-=. +|||..+ + ..-++.+
T Consensus 289 ~v~~~P~s------n~~---lg~---g~~p~~---------~l~~~Gv~v~-lGtD~~~-~------------~d~~~~~ 333 (456)
T PRK09229 289 VAGLCPTT------EAN---LGD---GIFPAV---------DYLAAGGRFG-IGSDSHV-S------------IDLVEEL 333 (456)
T ss_pred eEEECchh------hhh---hcC---CCCCHH---------HHHHCCCeEE-EecCCCC-C------------CCHHHHH
Confidence 67789952 111 111 124443 3345565445 8999522 1 0111111
Q ss_pred HHH-HH-HHHH----------hcCCHHHHHHHHchhhhhhcCC------CCCCccEEEEe
Q 019093 273 LSL-YA-KVFE----------EMGALDKLEAFTSFNGPDFYGL------PRNTSKIKLTK 314 (346)
Q Consensus 273 lp~-l~-~~~~----------~~~~l~~lv~~~s~nPAki~gl------~~kdAdlvi~d 314 (346)
-.+ +. .... .+.+..++.++.+.|+|+.+|+ +.|.|||+|+|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~GsLe~Gk~ADlvvld 393 (456)
T PRK09229 334 RLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGRAIGGLAVGARADLVVLD 393 (456)
T ss_pred HHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCCCcCCcCCCCccCEEEEe
Confidence 111 11 1100 1235678999999999999996 22489999999
No 104
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=98.42 E-value=1.8e-05 Score=78.72 Aligned_cols=154 Identities=11% Similarity=0.108 Sum_probs=87.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHH--hCCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQ--RLPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la--~~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++++.+++.|.++.+|+....- |..++.. .++ .+. ...+.++.+.|.. +.+.++++++.
T Consensus 190 e~l~~~~~~A~~~g~~v~~H~~e~~~-------~~~~~~~~~G~~~i~-~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~ 261 (430)
T PRK06038 190 EFLSKVKKLANKDGVGIHIHVLETEA-------ELNQMKEQYGMCSVN-YLDDIGFLGPDVLAAHCVWLSDGDIEILRER 261 (430)
T ss_pred HHHHHHHHHHHHcCCcEEEEcCCCHH-------HHHHHHHHhCCCHHH-HHHHcCCCCCCeEEEEEecCCHHHHHHHHhc
Confidence 78899999999999999999986531 1111111 110 111 2245565555554 45667887764
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+..-.||..-. .. + . -.+|+| +.++.|.-=. +|||..+.. +..
T Consensus 262 ---g~~v~~~P~~n~------~~-~--~---~~~p~~---------~~~~~Gv~v~-lGtD~~~~~-----------~~~ 305 (430)
T PRK06038 262 ---GVNVSHNPVSNM------KL-A--S---GIAPVP---------KLLERGVNVS-LGTDGCASN-----------NNL 305 (430)
T ss_pred ---CCEEEEChHHhh------hh-c--c---CCCCHH---------HHHHCCCeEE-EeCCCCccC-----------CCc
Confidence 355567885321 11 1 0 113433 3445565555 899953210 111
Q ss_pred c-h-hHHHHHHHHHHH----hcCCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 268 N-A-PVALSLYAKVFE----EMGALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 268 g-~-e~~lp~l~~~~~----~~~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
. + +..+..+..... ...++++++++.+.|||+.+|++. +.|||+++|
T Consensus 306 d~~~~~~~a~~~~~~~~~~~~~~~~~~al~~aT~~gA~~lg~~~G~l~~G~~ADlvvld 364 (430)
T PRK06038 306 DMFEEMKTAALLHKVNTMDPTALPARQVLEMATVNGAKALGINTGMLKEGYLADIIIVD 364 (430)
T ss_pred CHHHHHHHHHHHhhhccCCCCcCCHHHHHHHHhHHHHHHhCCCCCccCCCcccCEEEEe
Confidence 1 1 222222222111 124788999999999999999743 289999999
No 105
>PRK08418 chlorohydrolase; Provisional
Probab=98.40 E-value=6.4e-05 Score=74.31 Aligned_cols=153 Identities=14% Similarity=0.149 Sum_probs=88.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH---------------------HHHHHHHHhCCCCcEEEEcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID---------------------TILQPLIQRLPQLKVVMEHI 175 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~---------------------~~l~~~la~~~g~~lhi~Hv 175 (346)
+.+.++.+.+++.|.++.+|..... .|.+.+. +.++ .+...-+.++.+.|.
T Consensus 190 e~l~~~~~~A~~~~~~i~~H~~E~~-------~E~~~~~~~~G~~~~~~~~~~~~~~~~~~pv~-~l~~~g~~~~~~~H~ 261 (408)
T PRK08418 190 ILAKKALQLAKKENLLVSTHFLESK-------AEREWLEESKGWFKKFFEKFLKEPKPLYTPKE-FLELFKGLRTLFTHC 261 (408)
T ss_pred HHHHHHHHHHHHcCCeEEEEecCCH-------HHHHHHHhccCchhhhhhhhcccccccCCHHH-HHHHhCCCCeEEEec
Confidence 7889999999999999999987532 1111110 1121 223332467888887
Q ss_pred C--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCC
Q 019093 176 T--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHE 253 (346)
Q Consensus 176 S--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~ 253 (346)
. +.+.++++++. .+++-.||- +...- + .. .||++ +.+..|.-=. +|||-.+-.
T Consensus 262 ~~~~~~di~~la~~---g~~v~~cP~------sn~~l-g--~g---~~p~~---------~~~~~Gi~v~-lGtD~~~~~ 316 (408)
T PRK08418 262 VYASEEELEKIKSK---NASITHCPF------SNRLL-S--NK---ALDLE---------KAKKAGINYS-IATDGLSSN 316 (408)
T ss_pred ccCCHHHHHHHHHc---CCcEEECHh------HHHHh-c--CC---CccHH---------HHHhCCCeEE-EeCCCCCCC
Confidence 7 78889999875 345566882 22211 1 11 24444 3445565445 899932210
Q ss_pred ccccccCCCCCCccch-hHHHHHHHHHHHhc---CCHHHHHHHHchhhhhhcCCCC------CCccEEEEe
Q 019093 254 RGRKECACGCAGIYNA-PVALSLYAKVFEEM---GALDKLEAFTSFNGPDFYGLPR------NTSKIKLTK 314 (346)
Q Consensus 254 ~~~K~~~~~~~G~~g~-e~~lp~l~~~~~~~---~~l~~lv~~~s~nPAki~gl~~------kdAdlvi~d 314 (346)
....-+ |..+-++.. ... .+.+++.++.+.|+|+.+|++. |.|||+++|
T Consensus 317 ----------~~~~~~~em~~~~~~~--~~~~~~~~~~~~l~~aT~~gA~alg~~~G~l~~G~~ADlv~~d 375 (408)
T PRK08418 317 ----------ISLSLLDELRAALLTH--ANMPLLELAKILLLSATRYGAKALGLNNGEIKEGKDADLSVFE 375 (408)
T ss_pred ----------CCcCHHHHHHHHHHHh--ccCCccccHHHHHHHHHHHHHHHhCCCCccccCCCccCEEEEe
Confidence 011111 222211111 111 1257899999999999999742 379999999
No 106
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=98.40 E-value=7.5e-05 Score=74.85 Aligned_cols=151 Identities=16% Similarity=0.124 Sum_probs=86.8
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHH-----HHHHHHHh--CCCCcEEEEccC--CHHHHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDT-----ILQPLIQR--LPQLKVVMEHIT--TMDAVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~-----~l~~~la~--~~g~~lhi~HvS--t~~~l~~i~~a 187 (346)
+.+.++++ +++.|+++.+|+.... .|...+.+ -++ .+.+ ..+.++.+.|.. +.+.++++++.
T Consensus 216 e~l~~~~~-a~~~g~~v~~H~~e~~-------~e~~~~~~~~G~~~v~-~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~ 286 (455)
T TIGR02022 216 EQLAAVLQ-ASDRQAPVHIHVAEQQ-------KEVDDCLAWSGRRPVE-WLLDHGPVDARWCLVHATHLTDEETALLARS 286 (455)
T ss_pred HHHHHHHH-HHhCCCceEEEECCCh-------HHHHHHHHHhCCCHHH-HHHHcCCCCCCEEEEEeecCCHHHHHHHHHc
Confidence 67888888 7899999999995321 11111111 111 2232 356677777766 57788888874
Q ss_pred CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCcc
Q 019093 188 KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 188 kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
.+++-.||.. +.. .+. --||++ +.+..|.-=. +|||..+ + ..
T Consensus 287 ---g~~v~~~P~s------n~~---lg~---g~~pi~---------~l~~~Gv~v~-lGTD~~~-~------------~d 328 (455)
T TIGR02022 287 ---GAVAGLCPTT------EAN---LGD---GIFPAV---------DFVAAGGRFG-IGSDSHV-V------------ID 328 (455)
T ss_pred ---CCeEEEChhh------hcc---ccC---CCCCHH---------HHHHCCCeEE-EECCCCC-C------------CC
Confidence 4677889953 111 111 125543 3455575555 8999522 1 11
Q ss_pred ch-hHHHHHHHHHHHh-----------cCCHHHHHHHHchhhhhhcCCC------CCCccEEEEe
Q 019093 268 NA-PVALSLYAKVFEE-----------MGALDKLEAFTSFNGPDFYGLP------RNTSKIKLTK 314 (346)
Q Consensus 268 g~-e~~lp~l~~~~~~-----------~~~l~~lv~~~s~nPAki~gl~------~kdAdlvi~d 314 (346)
-+ |..+-.+...... ..+.+++.++.+.|+||.+|++ .|.|||+|+|
T Consensus 329 ~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~~~GsLe~Gk~ADlvvld 393 (455)
T TIGR02022 329 VAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGLATGGLRAGARADFLTLD 393 (455)
T ss_pred HHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCcCEEEEe
Confidence 11 2222222111111 1235688999999999999973 2389999999
No 107
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=98.29 E-value=1.4e-05 Score=73.37 Aligned_cols=192 Identities=19% Similarity=0.269 Sum_probs=107.3
Q ss_pred cEEEEEEEEeCCCC---CHHHHHHHH-HcCCeeEEEEeecCCccCCCCCccChHHHHH-HHHHHhHHcCCcEEEecCCCC
Q 019093 67 NFTPLMTLYLTDTT---SPDEIKLAR-KTGVVFAVKLYPAGATTNSQDGVTDLFGKCV-HVLEEMVEQNMPLLVHGEVTD 141 (346)
Q Consensus 67 d~~~~~~~~~~~~~---~~~el~~l~-~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~-~~l~~~~~~g~~v~vHaE~~~ 141 (346)
.+...+++ .+.. ..+++.+.. +.| +.|+|+++.. .+....+ ..++ ++++.++++|++|.+|+....
T Consensus 71 ~~~~~~~~--~~~~~~~~~~~l~~~~~~~g-~~Gv~l~~~~----~~~~~~~--~~~~~~~~~~~~~~~~pv~~H~g~~~ 141 (273)
T PF04909_consen 71 RFIGFAAI--PPPDPEDAVEELERALQELG-FRGVKLHPDL----GGFDPDD--PRLDDPIFEAAEELGLPVLIHTGMTG 141 (273)
T ss_dssp TEEEEEEE--TTTSHHHHHHHHHHHHHTTT-ESEEEEESSE----TTCCTTS--GHCHHHHHHHHHHHT-EEEEEESHTH
T ss_pred CEEEEEEe--cCCCchhHHHHHHHhccccc-eeeeEecCCC----Ccccccc--HHHHHHHHHHHHhhccceeeeccccc
Confidence 45555454 3322 234666666 456 8999999742 1222334 3455 999999999999999977100
Q ss_pred CCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH-----HHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCc
Q 019093 142 PIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM-----DAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPH 216 (346)
Q Consensus 142 ~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~-----~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~ 216 (346)
. ............ +...+.+++++|+.+.|+... +.++++++. -+++++++.-+-.
T Consensus 142 ~--~~~~~~~~~~~~-~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~--~nvy~d~s~~~~~-------------- 202 (273)
T PF04909_consen 142 F--PDAPSDPADPEE-LEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF--PNVYVDLSGIPPF-------------- 202 (273)
T ss_dssp H--HHHHHHHHHHHH-HTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH--TTEEEECHSHHSS--------------
T ss_pred h--hhhhHHHHHHHH-HHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC--Ccccccccccccc--------------
Confidence 0 001111111211 222578999999999999998 666666655 3688887652111
Q ss_pred eEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHH-HHHhcCCHHHHHHHHch
Q 019093 217 NYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAK-VFEEMGALDKLEAFTSF 295 (346)
Q Consensus 217 ~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~-~~~~~~~l~~lv~~~s~ 295 (346)
....++......-..+.+..-.+.| + .|||. |+....+. ...++. ......+-+..-++++.
T Consensus 203 ~~~~~~~~~~~~l~~~~~~~g~dri-l-fGSD~-P~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~i~~~ 265 (273)
T PF04909_consen 203 WYFWPPSFDRPFLRRAVDEFGPDRI-L-FGSDY-PHPDGASP--------------YEYIWEAYFLDDLSEEEREKILYD 265 (273)
T ss_dssp EEEETTHHCHHHHHHHHHHHTGGGE-E-EE--T-TSSTHHHH--------------HHHHHHHHHHHHSSHHHHHHHHTH
T ss_pred cccCcccccHHHHHHHHHHhCCceE-E-ecCCC-CCCCcccc--------------HHHHHHhhhccCCCHHHHHHHHhH
Confidence 2223333333333344444433344 4 79995 76533211 111111 11111577888999999
Q ss_pred hhhhhcCC
Q 019093 296 NGPDFYGL 303 (346)
Q Consensus 296 nPAki~gl 303 (346)
|++|+|||
T Consensus 266 NA~rl~~l 273 (273)
T PF04909_consen 266 NARRLYGL 273 (273)
T ss_dssp HHHHHHTC
T ss_pred hHHHHcCc
Confidence 99999997
No 108
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=98.26 E-value=1.1e-05 Score=81.01 Aligned_cols=252 Identities=14% Similarity=0.127 Sum_probs=132.4
Q ss_pred eEEecCccccceecCCCccccccccccC--CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEE-----
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSV--SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTL----- 74 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~s--GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~----- 74 (346)
+|+.||+||.|+|+..+...-..|.... -|+||+|.=|...--....+.++...+.+++ .. .++.++..-
T Consensus 73 ~yivPGfID~H~HIESSm~tP~~FA~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~-~p--l~~~~~~pScVPat 149 (584)
T COG1001 73 RYIVPGFIDAHLHIESSMLTPSEFARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKE-TP--LKVYVMLPSCVPAT 149 (584)
T ss_pred CEeccceeecceeccccccCHHHHHHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhh-CC--eEEEEecccCccCC
Confidence 5899999999999865333334555443 8999998877443333445666666665544 23 566553210
Q ss_pred -EeCCC--CCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093 75 -YLTDT--TSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK 151 (346)
Q Consensus 75 -~~~~~--~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~ 151 (346)
+-+.+ ...+++.++.+.--|.++-=+|.+ .+. +..+ ..+..-++.+++.|++|-=||---+- .|
T Consensus 150 ~~Et~Ga~l~a~~i~e~~~~p~Vigl~E~Mn~----pgV-i~~D-~~~l~kl~a~~~~~k~VdGHapgl~g------~~- 216 (584)
T COG1001 150 PFETSGAELTAEDIKELLEHPEVIGLGEMMNF----PGV-IEGD-PDMLAKLEAARKAGKPVDGHAPGLSG------KE- 216 (584)
T ss_pred ccccCCceecHHHHHHHhhCCCccchhhhcCC----chh-ccCC-HHHHHHHHHHHHcCCeecccCCCCCh------HH-
Confidence 00111 124567777664335444333432 111 2223 67888899999999999889864321 11
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhH
Q 019093 152 VFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHR 229 (346)
Q Consensus 152 ~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~ 229 (346)
+.. +++. |.. =.|=+ -.|+++.+|. |..+. + +. |+. ..|-
T Consensus 217 --Ln~----Y~aa--Gi~--tDHE~~t~EEa~~klr~--Gm~i~---------i------Re--GS~---------a~dl 258 (584)
T COG1001 217 --LNA----YIAA--GIS--TDHESTTAEEALEKLRL--GMKIM---------I------RE--GSA---------AKDL 258 (584)
T ss_pred --HHH----HHhc--CCC--cCcccCCHHHHHHHHhC--CcEEE---------E------Ec--Cch---------hhhH
Confidence 111 1221 222 34433 2334443332 33221 1 11 111 2455
Q ss_pred HHHHHHHHcCCc-cEEeecCCCCCCccccccCCCCCCccchhHHHHHHH-HHHHhcCCHHHHHHHHchhhhhhcCCC-CC
Q 019093 230 QAVVSAVTSGSR-KFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA-KVFEEMGALDKLEAFTSFNGPDFYGLP-RN 306 (346)
Q Consensus 230 ~aL~~al~~G~I-d~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~-~~~~~~~~l~~lv~~~s~nPAki~gl~-~k 306 (346)
.+|..++.+--+ .+++.||-..-. + +-.-| .+--+. .........-..+++.|-|||+.|||+ .+
T Consensus 259 ~~l~~~i~e~~~~~~~lcTDD~~p~-d-----l~~eG------hld~~vR~Ai~~Gv~p~~a~qmAtiN~A~~~gl~~~G 326 (584)
T COG1001 259 AALLPAITELGSRRVMLCTDDRHPD-D-----LLEEG------HLDRLVRRAIEEGVDPLDAYQMATINPAEHYGLDDLG 326 (584)
T ss_pred HHHHHHHhhcCCceEEEECCCCChh-H-----hhhcC------CHHHHHHHHHHcCCCHHHHHHHHhcCHHHHcCCcccc
Confidence 566666654332 122344442211 0 00012 122222 233333467788999999999999996 33
Q ss_pred ------CccEEEEe--cceee
Q 019093 307 ------TSKIKLTK--IPWKV 319 (346)
Q Consensus 307 ------dAdlvi~d--~~~~v 319 (346)
.|||++++ +.+++
T Consensus 327 ~iAPG~~ADlvi~~DL~~~~v 347 (584)
T COG1001 327 LIAPGRRADLVILEDLRNFKV 347 (584)
T ss_pred cccCCccccEEEEcccccCce
Confidence 79999996 55444
No 109
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.25 E-value=3.4e-05 Score=70.50 Aligned_cols=143 Identities=16% Similarity=0.185 Sum_probs=71.4
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATV 196 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et 196 (346)
..+.+.++.+++.|+||.+|+.... ..+++ .+.++...+..|.|.-+ .+.+.+++.....++.++
T Consensus 108 ~~~~~~~~~a~~~~~pv~iH~~~~~-------------~~~~~-~l~~~~~~~~~i~H~~~-~~~~~~~~~~~~g~~~~~ 172 (252)
T TIGR00010 108 EVFRAQLQLAEELNLPVIIHARDAE-------------EDVLD-ILREEKPKVGGVLHCFT-GDAELAKKLLDLGFYISI 172 (252)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCcc-------------HHHHH-HHHhcCCCCCEEEEccC-CCHHHHHHHHHCCCeEee
Confidence 5677789999999999999998532 11221 23333222344557643 222333332213455565
Q ss_pred cchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHH
Q 019093 197 TPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLY 276 (346)
Q Consensus 197 ~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l 276 (346)
+....+ ++.+.-..+++.+-.+ .++++||- |+...... .|-..-...++-+
T Consensus 173 ~~~~~~---------------------~~~~~~~~~i~~~~~d--ril~~TD~-p~~~~~~~-----~~~~~~p~~i~~~ 223 (252)
T TIGR00010 173 SGIVTF---------------------KNAKSLREVVRKIPLE--RLLVETDS-PYLAPVPY-----RGKRNEPAFVRYT 223 (252)
T ss_pred ceeEec---------------------CCcHHHHHHHHhCCHH--HeEecccC-CCCCCCCC-----CCCCCCChhHHHH
Confidence 541100 1112222333433212 23479996 54211000 1111112234432
Q ss_pred HH-HH-HhcCCHHHHHHHHchhhhhhcCC
Q 019093 277 AK-VF-EEMGALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 277 ~~-~~-~~~~~l~~lv~~~s~nPAki~gl 303 (346)
.. .. ....+.+++.++++.||+|+|||
T Consensus 224 ~~~~a~~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 224 VEAIAEIKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhCc
Confidence 22 11 12347899999999999999986
No 110
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=98.25 E-value=0.00037 Score=64.61 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=65.4
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
..+++.++.+.| +.|+|+.+.. .+. .++ ..+.++++.++++|.++.+|+....+ ..+. .
T Consensus 82 ~~~~l~~~~~~g-~rGvRl~~~~----~~~--~~~-~~~~~~~~~~~~~gl~v~~~~~~~~l------------~~l~-~ 140 (263)
T cd01311 82 TDAELKEMHDAG-VRGVRFNFLF----GGV--DNK-DELDEIAKRAAELGWHVQVYFDAVDL------------PALL-P 140 (263)
T ss_pred CHHHHHHHHHCC-CeEEEEeccc----CCC--CCH-HHHHHHHHHHHHcCCEEEEEeCHhhH------------HHHH-H
Confidence 356888887788 8999987531 111 244 77899999999999999999976432 1122 1
Q ss_pred HHHhCCCCcEEEEccCCHH--------HH-HHHHccCCCeeEEEccch
Q 019093 161 LIQRLPQLKVVMEHITTMD--------AV-KFVESCKEGFVAATVTPQ 199 (346)
Q Consensus 161 ~la~~~g~~lhi~HvSt~~--------~l-~~i~~akg~~vt~Et~ph 199 (346)
.++++ ++++.+.|+..+. .. +.++.++.-+|++.++--
T Consensus 141 l~~~~-~l~ivldH~G~p~~~~~~~~~~~~~~l~~l~~pNV~~k~Sg~ 187 (263)
T cd01311 141 FLQKL-PVAVVIDHFGRPDVTKGVDGAEFAALLKLIEEGNVWVKVSGP 187 (263)
T ss_pred HHHHC-CCCEEEECCCCCCCCCCCCCHhHHHHHHHHhcCCEEEEecch
Confidence 35666 9999999998532 22 223322335788888763
No 111
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=98.19 E-value=0.00014 Score=68.68 Aligned_cols=184 Identities=16% Similarity=0.193 Sum_probs=107.4
Q ss_pred cEEEEEEEEeCCCC---CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCC
Q 019093 67 NFTPLMTLYLTDTT---SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPI 143 (346)
Q Consensus 67 d~~~~~~~~~~~~~---~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~ 143 (346)
+|...+.+ .+.. ...|+++.++.++++++|+.+... +.. .++ ..++.+|+.++++|+|+.+|.......
T Consensus 99 rf~~~~~v--~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~----~~~-~~~-~~~~pi~~~a~~~gvpv~ihtG~~~~~ 170 (293)
T COG2159 99 RFVGFARV--DPRDPEAAAEELERRVRELGFVGVKLHPVAQ----GFY-PDD-PRLYPIYEAAEELGVPVVIHTGAGPGG 170 (293)
T ss_pred ceeeeeee--CCCchHHHHHHHHHHHHhcCceEEEeccccc----CCC-CCC-hHHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 55554444 4432 345888888754489999976431 111 233 678999999999999999999976532
Q ss_pred CChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-----CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceE
Q 019093 144 VDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-----TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNY 218 (346)
Q Consensus 144 ~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-----t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k 218 (346)
.+.... .+.-..+...+.++++.|+.+.|++ ..+++++.+. .-+++.|++- ...+
T Consensus 171 ~~~~~~--~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~--~~nvy~d~s~----------------~~~~ 230 (293)
T COG2159 171 AGLEKG--HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYA--HPNVYLDTSG----------------VRPK 230 (293)
T ss_pred cccccC--CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHh--CCCceeeeec----------------cccc
Confidence 111110 0011123324678899999999998 3444444433 2466666643 1222
Q ss_pred EeCCCCChhhHHHHHHHHHc-CCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhh
Q 019093 219 CLPVLKREIHRQAVVSAVTS-GSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNG 297 (346)
Q Consensus 219 ~~PPLR~~~d~~aL~~al~~-G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nP 297 (346)
+-+| .+|+-+.+ |.=-++.||| .|+...++. +- .......+-+...+++..|+
T Consensus 231 ~~~~--------~~~~~~~~~~~dkilFGSD-~P~~~~~~~--------------l~---~~~~l~l~~e~k~kiL~~NA 284 (293)
T COG2159 231 YFAP--------PLLEFLKELGPDKILFGSD-YPAIHPEVW--------------LA---ELDELGLSEEVKEKILGENA 284 (293)
T ss_pred cCCh--------HHHHHHHhcccCeEEecCC-CCCcCHHHH--------------HH---HHHhcCCCHHHHHHHHHHhH
Confidence 3333 34444443 3334446999 576433321 11 11111234467788899999
Q ss_pred hhhcCCC
Q 019093 298 PDFYGLP 304 (346)
Q Consensus 298 Aki~gl~ 304 (346)
+|+|||.
T Consensus 285 ~rll~l~ 291 (293)
T COG2159 285 ARLLGLD 291 (293)
T ss_pred HHHhCcC
Confidence 9999994
No 112
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.17 E-value=0.00012 Score=74.35 Aligned_cols=193 Identities=16% Similarity=0.111 Sum_probs=123.3
Q ss_pred ccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHH---HHHHHh--CCCCcEEEEccC--CHHHHHHH
Q 019093 112 VTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTIL---QPLIQR--LPQLKVVMEHIT--TMDAVKFV 184 (346)
Q Consensus 112 ~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l---~~~la~--~~g~~lhi~HvS--t~~~l~~i 184 (346)
+.+. ++|.++.+.+.+.|.++.+||=-.. |+..+| +....+ ..+.+-.|.|++ +++.++.+
T Consensus 317 l~~~-e~l~~~v~~a~~~gl~v~vHAiGD~-----------Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~ 384 (535)
T COG1574 317 LLTE-EELEELVRAADERGLPVAVHAIGDG-----------AVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERF 384 (535)
T ss_pred ccCH-HHHHHHHHHHHHCCCcEEEEEechH-----------HHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHH
Confidence 4444 8899999999999999999997432 232232 111111 237888899998 56666666
Q ss_pred HccCCCeeEEEccchhhccchhhhcc-CCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCC
Q 019093 185 ESCKEGFVAATVTPQHLVLNRNALFQ-GGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGC 263 (346)
Q Consensus 185 ~~akg~~vt~Et~ph~L~l~~~~~~~-~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~ 263 (346)
++ +.|.+.+-|+|++...+.+.. .| ..+.+-++|+|+ .++.|..=. .|||- |-+..+ +|
T Consensus 385 ~~---Lgv~~svQP~f~~~~~~~~~~rlG-~~r~~~~~p~~~---------ll~~G~~la-~gSD~-Pv~~~d---P~-- 444 (535)
T COG1574 385 AK---LGVIASVQPNFLFSDGEWYVDRLG-EERASRSYPFRS---------LLKAGVPLA-GGSDA-PVEPYD---PW-- 444 (535)
T ss_pred Hh---cCceEeeccccccccchHHHHhhh-hhhhhccCcHHH---------HHHCCCeEe-ccCCC-CCCCCC---hH--
Confidence 54 678999999999876443332 22 245666777663 356688888 79996 442211 11
Q ss_pred CCccchhHHHHHH-HHH----HHhcCCHHHHHHHHchhhhhhcCCC-C-------CCccEEEEe-cceeecCCccc-cCC
Q 019093 264 AGIYNAPVALSLY-AKV----FEEMGALDKLEAFTSFNGPDFYGLP-R-------NTSKIKLTK-IPWKVPEAFSF-SFG 328 (346)
Q Consensus 264 ~G~~g~e~~lp~l-~~~----~~~~~~l~~lv~~~s~nPAki~gl~-~-------kdAdlvi~d-~~~~v~~~~~~-s~~ 328 (346)
.|++.++--- ... -..++++++..++.+.|+|...|.. . |.|||+|+| ..|+++.+.+. .++
T Consensus 445 ---~~i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~~~i~~~~v 521 (535)
T COG1574 445 ---LGIYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDPDSIKDTKV 521 (535)
T ss_pred ---HHHHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCChHHhccceE
Confidence 1111111100 000 0115688899999999999988872 2 279999999 78999887664 366
Q ss_pred cccccCCCcEEE
Q 019093 329 DIIPMFAGNTLE 340 (346)
Q Consensus 329 ~~sp~~~G~~l~ 340 (346)
.-|.+ +|+.+.
T Consensus 522 ~~T~~-~Gk~VY 532 (535)
T COG1574 522 VLTIV-AGKVVY 532 (535)
T ss_pred EEEEE-cCeEee
Confidence 67777 576543
No 113
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=98.13 E-value=0.00025 Score=65.65 Aligned_cols=136 Identities=19% Similarity=0.234 Sum_probs=73.4
Q ss_pred HHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEEEccc
Q 019093 119 CVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAATVTP 198 (346)
Q Consensus 119 l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~Et~p 198 (346)
+.++++.+++.|+++.+|+.......+ ...+...+ .+ ....-.|..|+ +.+.++++++. .+.+..||
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~~~g-----~~~i~~~~--~~--~~~~i~H~~~l-~~~~~~~la~~---g~~v~~~P 193 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRESVG-----MTDIERAL--DL--EPDLLVHGTHL-TDEDLELVREN---GVPVVLCP 193 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCCCCC-----chhHHHHH--hC--CCCEEEEcCCC-CHHHHHHHHHc---CCcEEECh
Confidence 889999999999999999875421000 01133333 11 11222344444 56778888874 46678898
Q ss_pred hhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-hHHHHHHH
Q 019093 199 QHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA-PVALSLYA 277 (346)
Q Consensus 199 h~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~-e~~lp~l~ 277 (346)
.. ++.- +.+ .||+ .+.++.|. .+.+|||..+.. ++ .-+ |..+-+..
T Consensus 194 ~s------n~~l-~~g-----~~p~---------~~l~~~Gv-~v~lGtD~~~~~----------~~-~~~~~~~~~~~~ 240 (263)
T cd01305 194 RS------NLYF-GVG-----IPPV---------AELLKLGI-KVLLGTDNVMVN----------EP-DMWAEMEFLAKY 240 (263)
T ss_pred hh------HHHh-CCC-----CCCH---------HHHHHCCC-cEEEECCCCccC----------CC-CHHHHHHHHHHH
Confidence 41 1110 111 1443 34455574 444899974421 01 111 22221111
Q ss_pred HHHHhcCCHHHHHHHHchhhhhh
Q 019093 278 KVFEEMGALDKLEAFTSFNGPDF 300 (346)
Q Consensus 278 ~~~~~~~~l~~lv~~~s~nPAki 300 (346)
.......+..++.++.+.|+||+
T Consensus 241 ~~~~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 241 SRLQGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred hcccccCCHHHHHHHHhhccccC
Confidence 11112347889999999999985
No 114
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=98.08 E-value=0.00011 Score=72.84 Aligned_cols=158 Identities=14% Similarity=0.099 Sum_probs=85.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCCh-hhhH---HHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDI-FDRE---KVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEG 190 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~-~~~E---~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~ 190 (346)
+.+..+.+.+++.|+++-+|+-...- .. ...| ...+.+. ......+-+..+.|.. +.+.++++++ .
T Consensus 198 ~~~~~~~~l~~~~~~~v~iH~~E~~~--e~~~~~~~~g~~~~~~~---~~~g~l~~~~~~~H~~~~~~~e~~~l~~---~ 269 (421)
T COG0402 198 ELLESLDELARKYGLPVHIHLAETLD--EVERVLEPYGARPVERL---DLLGLLGSHTLLAHCVHLSEEELELLAE---S 269 (421)
T ss_pred HHHHHHHHHHhcCCCceEEEecCcHH--HHHHHHhhcCCCHHHHH---HHcCCCCCCeEEEEeccCCHHHHHHHhh---C
Confidence 56777777777899999999764321 00 0011 0011111 1222334566666666 5666777774 3
Q ss_pred eeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccch-
Q 019093 191 FVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNA- 269 (346)
Q Consensus 191 ~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~- 269 (346)
.+++-.|| .++..- +.. +.| +++.+..|.--. ++||-+.+...- .-+
T Consensus 270 g~~v~~cP------~sN~~L---~sG--~~p----------~~~~~~~gv~v~-~gTD~~~~~~~~----------d~l~ 317 (421)
T COG0402 270 GASVVHCP------RSNLKL---GSG--IAP----------VRRLLERGVNVA-LGTDGAASNNVL----------DMLR 317 (421)
T ss_pred CCeEEECc------chhccc---cCC--CCC----------HHHHHHcCCCEE-EecCCccccChH----------HHHH
Confidence 46777899 232221 112 333 344566674444 899986653100 001
Q ss_pred hHHHHHHHHHHHhcC--CHH--HHHHHHchhhhhhcCC-------CCCCccEEEEe
Q 019093 270 PVALSLYAKVFEEMG--ALD--KLEAFTSFNGPDFYGL-------PRNTSKIKLTK 314 (346)
Q Consensus 270 e~~lp~l~~~~~~~~--~l~--~lv~~~s~nPAki~gl-------~~kdAdlvi~d 314 (346)
|.....++....... +.. ++.++.+.|+||.||+ +.++|||+++|
T Consensus 318 ~~~~a~~l~~~~~~~~~~~~~~~~l~~aT~~gA~alg~~~~G~le~G~~ADlvvld 373 (421)
T COG0402 318 EMRTADLLQKLAGGLLAAQLPGEALDMATLGGAKALGLDDIGSLEVGKKADLVVLD 373 (421)
T ss_pred HHHHHHHHHHhhcCCCcccchHHHHHHHHhhHHHHcCCcccCCcccccccCEEEEc
Confidence 223333333222211 122 2789999999999994 22489999999
No 115
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.06 E-value=0.0011 Score=64.24 Aligned_cols=31 Identities=13% Similarity=0.241 Sum_probs=27.8
Q ss_pred CCHHHHHHHHchhhhhhcCC-CCC------CccEEEEe
Q 019093 284 GALDKLEAFTSFNGPDFYGL-PRN------TSKIKLTK 314 (346)
Q Consensus 284 ~~l~~lv~~~s~nPAki~gl-~~k------dAdlvi~d 314 (346)
++|++.++.|+..+|+-||| +++ -|||+|||
T Consensus 474 l~Le~av~rmT~~~Ae~~GL~drGlvreG~rADl~viD 511 (579)
T COG3653 474 LSLERAVRRMTGELAEWFGLGDRGLVREGDRADLVVID 511 (579)
T ss_pred ccHHHHHHHHhccHHHHhCcccccccccccccceEEEc
Confidence 47999999999999999999 454 69999999
No 116
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=98.04 E-value=2.2e-05 Score=75.58 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=30.7
Q ss_pred CHHHHHHHHchhhhhhcCCC-CC-------CccEEEEecceeec
Q 019093 285 ALDKLEAFTSFNGPDFYGLP-RN-------TSKIKLTKIPWKVP 320 (346)
Q Consensus 285 ~l~~lv~~~s~nPAki~gl~-~k-------dAdlvi~d~~~~v~ 320 (346)
++++.+++.|.||||.+||. ++ +||||++|..+.|.
T Consensus 326 ~~~eAv~maS~~PA~~lgl~~~~G~i~~G~~Adlvvld~d~~v~ 369 (380)
T COG1820 326 SLAEAVRMASLNPAKALGLDDRLGSIKPGKDADLVVLDDDLNVK 369 (380)
T ss_pred CHHHHHHHhhhhHHHHhCCcCcccccCCCcccCEEEECCCCcEE
Confidence 68899999999999999984 42 89999999666664
No 117
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=97.95 E-value=0.00018 Score=70.50 Aligned_cols=161 Identities=20% Similarity=0.164 Sum_probs=87.6
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC--CHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT--TMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS--t~~~l~~i~~akg~~vt~ 194 (346)
..+.++++.+.+.|..+.+||... .++..++. .+.+ ......+.|.+ +.+.++.+++ ..+.+
T Consensus 225 ~~l~~~v~~a~~~g~~v~vHa~gd-----------~a~~~~l~-a~~~-~~~~~~i~h~~~~~~~~~~~~~~---l~~~~ 288 (404)
T PF07969_consen 225 EELEELVRAAREAGLQVAVHAIGD-----------RAIDEALD-AIEA-ARARGRIEHAELIDPDDIERMAE---LGVTA 288 (404)
T ss_dssp HHHHHHHHHHHHCT-EEEEEEESH-----------HHHHHHHH-HHHH-HTCCHEEEEHCBCCHHHHHHHHH---HTTEE
T ss_pred hhHHHHHHHHHhcCCeeEEEEcCC-----------chHHhHHH-HHHh-hcccceeeccccCCHHHHHHHHH---hCCcc
Confidence 568999999999999999999532 12333332 1111 11111455554 7777777776 35788
Q ss_pred Eccchhhccch-hhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHH
Q 019093 195 TVTPQHLVLNR-NALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVAL 273 (346)
Q Consensus 195 Et~ph~L~l~~-~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~l 273 (346)
++.|||+.... +.+... .+. -|. .....+...+..|..-+ ++||+ |.+.. .+ +.+++...
T Consensus 289 ~~~p~~~~~~~~~~~~~~-~~~-------~~~-~~~~~~~~~~~~Gv~v~-~gsD~-p~~~~------~P--~~~~~~~~ 349 (404)
T PF07969_consen 289 SVQPHFLFSWGGEWYEER-LGP-------ERA-RRIYPIRSLLDAGVRVA-LGSDA-PVSPP------NP--FRGIWAAV 349 (404)
T ss_dssp EECCTHHHHETEETHHHH-HHH-------HCG-GGBTHHHHHHHCTTEEE-E--TT-TTSSC------CH--HHHHHHHH
T ss_pred ccChhHhhhccchhhhhh-hhh-------HHH-HHHhHHHHHHhccCcee-cCcCC-ccccc------Cc--chhhhhhh
Confidence 99998887665 211100 000 000 11124556677786666 89997 32100 00 01122211
Q ss_pred HHH-HHHH-------HhcCCHHHHHHHHchhhhhhcCC-CC-C------CccEEE
Q 019093 274 SLY-AKVF-------EEMGALDKLEAFTSFNGPDFYGL-PR-N------TSKIKL 312 (346)
Q Consensus 274 p~l-~~~~-------~~~~~l~~lv~~~s~nPAki~gl-~~-k------dAdlvi 312 (346)
... .... .+..++++.++.++.|||+.+|+ ++ + .|||||
T Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 350 TRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp HHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred ccccccccccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 111 1111 14568999999999999999999 44 2 899987
No 118
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=97.89 E-value=5.1e-06 Score=60.77 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=20.8
Q ss_pred eEEecCccccceecCC-Ccccc--cccc--ccCCceeEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDLLK--AVVP--HSVSHYGRA 35 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~~k--e~~~--s~sGGvTtv 35 (346)
++|+||+||+|+|+++ ..... ++.. ...+|+|||
T Consensus 30 ~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 30 KYVMPGFIDMHTHLGEPGWQSLDPETEAAAALAGGVTTV 68 (68)
T ss_dssp CEEEE-EEEEEE-TTTTCEGGCTCHHHHHHHHHTTEEEE
T ss_pred CEEeCCeEeeeeccccccccccchhhHHHHHHCcceeeC
Confidence 5899999999999875 22221 1111 235999997
No 119
>PRK06886 hypothetical protein; Validated
Probab=97.86 E-value=0.0013 Score=63.10 Aligned_cols=157 Identities=19% Similarity=0.111 Sum_probs=85.0
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHH---------HHHHHHcc
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMD---------AVKFVESC 187 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~---------~l~~i~~a 187 (346)
+.+..+|+.++++|++|-+|+-...- ....+.+.+.+. .+..-.+.|+.+.|..+-. .+++++++
T Consensus 162 e~l~~~~~lA~~~g~~Id~Hlde~~~---~~~~~le~l~~~---~~~~Gl~grV~~sH~~~L~~~~~~~~~~~i~~La~a 235 (329)
T PRK06886 162 EAMDILLDTAKSLGKMVHVHVDQFNT---PKEKETEQLCDK---TIEHGMQGRVVAIHGISIGAHSKEYRYRLYQKMREA 235 (329)
T ss_pred HHHHHHHHHHHHcCCCeEEeECCCCc---hhHHHHHHHHHH---HHHcCCCCCEEEEEeccccCcChhhHHHHHHHHHHc
Confidence 67899999999999999999986431 111111111111 1222234588888887543 25666654
Q ss_pred CCCeeEEEccchh-hccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCc
Q 019093 188 KEGFVAATVTPQH-LVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGI 266 (346)
Q Consensus 188 kg~~vt~Et~ph~-L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~ 266 (346)
.+.+=+||.- |+|+...-. -+...--||++ +.++.|.-=. +|||-..- +|.+.|.
T Consensus 236 ---gi~Vv~~P~snl~l~~~~~~----~p~~rGv~pv~---------eL~~aGV~V~-lGtDnv~D-------~~~p~g~ 291 (329)
T PRK06886 236 ---DMMVIACPMAWIDSNRKEDL----MPFHNALTPAD---------EMIPEGITVA-LGTDNICD-------YMVPLCE 291 (329)
T ss_pred ---CCeEEECchhhhhhcccccc----CcCCCCCCCHH---------HHHHCCCeEE-EecCCCcc-------cCCCCCC
Confidence 4556677853 222211100 01111123322 3444465455 89996421 2334344
Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCC
Q 019093 267 YNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLP 304 (346)
Q Consensus 267 ~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~ 304 (346)
..+=..+-++... .+..++.++.++.+.|+||.+||.
T Consensus 292 ~Dmle~~~l~~~~-~~~~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 292 GDMWQELSLLAAG-CRFYDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred CCHHHHHHHHHHH-cCCCCHHHHHHHHhhhHHHHhCCC
Confidence 3331112222221 122368999999999999999984
No 120
>PRK10812 putative DNAse; Provisional
Probab=97.71 E-value=0.006 Score=56.78 Aligned_cols=119 Identities=17% Similarity=0.077 Sum_probs=59.5
Q ss_pred ccccceecCC-Cc-cccccc----ccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCC
Q 019093 8 PDDWHLHLRD-GD-LLKAVV----PHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTT 80 (346)
Q Consensus 8 ~ID~HvH~r~-g~-~~ke~~----~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~ 80 (346)
+||.|+|+.. .. ...++. ..+ .-|+..++... ++++......+.++... .+ +.++++.|..
T Consensus 3 ~iDtH~Hl~~~~~~~~~~d~~~vl~~a~~~gv~~~~~~~------~~~~~~~~~~~l~~~~~----~v--~~~~GiHP~~ 70 (265)
T PRK10812 3 LVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVA------TTLPGYRHMRDLVGERD----NV--VFSCGVHPLN 70 (265)
T ss_pred eEEeccCCCCccchhhhcCHHHHHHHHHHcCCCEEEEeC------CCHHHHHHHHHHHhhCC----Ce--EEEEEeCCCC
Confidence 6999999963 11 112222 222 36888776653 23444444444433321 22 2233335532
Q ss_pred -----CHHHHHHHHHcCCeeEE-EEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC
Q 019093 81 -----SPDEIKLARKTGVVFAV-KLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT 140 (346)
Q Consensus 81 -----~~~el~~l~~~G~v~~~-Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~ 140 (346)
..+++.++.+...++++ ++=+.|......... .. ..+.+.++.++++|+||++|+-+.
T Consensus 71 ~~~~~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~-Q~-~vf~~ql~lA~e~~~Pv~iH~r~a 134 (265)
T PRK10812 71 QDEPYDVEELRRLAAEEGVVAMGETGLDYYYTPETKVR-QQ-ESFRHHIQIGRELNKPVIVHTRDA 134 (265)
T ss_pred CCChhHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHH-HH-HHHHHHHHHHHHhCCCeEEEeeCc
Confidence 13345555443335555 442221000000001 11 467788899999999999999874
No 121
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=97.32 E-value=0.0036 Score=58.72 Aligned_cols=153 Identities=15% Similarity=0.122 Sum_probs=83.3
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh--CCCCcEEEEccCCHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR--LPQLKVVMEHITTMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~--~~g~~lhi~HvSt~~~l~~i~~akg~~vt~ 194 (346)
..+.+.++.++++|+||++|+.+..- +....++ .+.+ ....++.+.|+-...+.+.++++....++.
T Consensus 136 ~~f~~~~~lA~~~~~Pv~iH~~~~~~----------~~~~~l~-~l~~~g~~~~~~vi~H~~~~~~~~~~~~~~~~G~~i 204 (293)
T cd00530 136 KVLRAAARAQKETGVPISTHTQAGLT----------MGLEQLR-ILEEEGVDPSKVVIGHLDRNDDPDYLLKIAALGAYL 204 (293)
T ss_pred HHHHHHHHHHHHHCCeEEEcCCCCcc----------ccHHHHH-HHHHcCCChhheEEeCCCCCCCHHHHHHHHhCCCEE
Confidence 46778899999999999999987410 0112221 1222 223356899995211233333332112333
Q ss_pred EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCcc--EEeecCCCCCCccccccCCCCCCccchhHH
Q 019093 195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRK--FFLGTDSAPHERGRKECACGCAGIYNAPVA 272 (346)
Q Consensus 195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id--~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~ 272 (346)
+.+.-.. +. ..-.|| .....+.+.++++.|-+| + ++||- |+...... ..+-.+....
T Consensus 205 ~~~~~~~-~~------------~~~~~~--~~~~~~~l~~~~~~~~~d~il-l~TD~-p~~~~~~~----~~~~~~~~~~ 263 (293)
T cd00530 205 EFDGIGK-DK------------IFGYPS--DETRADAVKALIDEGYGDRLL-LSHDV-FRKSYLEK----RYGGHGYDYI 263 (293)
T ss_pred EeCCCCc-cc------------ccCCCC--HHHHHHHHHHHHHCCCcCCEE-EeCCc-Cchhhhhh----ccCCCChHHH
Confidence 3331000 00 000111 134456788999999888 7 89994 66322100 0111233444
Q ss_pred HHHHHHHHHhcC-CHHHHHHHHchhhhhhc
Q 019093 273 LSLYAKVFEEMG-ALDKLEAFTSFNGPDFY 301 (346)
Q Consensus 273 lp~l~~~~~~~~-~l~~lv~~~s~nPAki~ 301 (346)
+..+...+..++ +.+++.+++..||+|+|
T Consensus 264 ~~~~~~~~~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 264 LTRFIPRLRERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHCHHHhC
Confidence 444444444444 89999999999999987
No 122
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=97.32 E-value=0.0094 Score=55.03 Aligned_cols=233 Identities=15% Similarity=0.127 Sum_probs=108.9
Q ss_pred cccceecCC-Cc-c-cccccccc-CCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEEEEEeCCCCC---
Q 019093 9 DDWHLHLRD-GD-L-LKAVVPHS-VSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDTTS--- 81 (346)
Q Consensus 9 ID~HvH~r~-g~-~-~ke~~~s~-sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~--- 81 (346)
||.|+|+.. .. . ..+.+... ..|++.++.+-. +.+.++...+.+++ .. ..+.+..|+ .|...
T Consensus 1 iD~H~Hl~~~~~~~~~~~~~~~~~~~g~~~~i~~~~------~~~~~~~~~~~~~~-~~--~~v~~~~Gi--HP~~~~~~ 69 (255)
T PF01026_consen 1 IDAHCHLDSPRFEEDRPEVLERAREAGVSAIIIVST------DPEDWERVLELASQ-YP--DRVYPALGI--HPWEAHEV 69 (255)
T ss_dssp EEEEE-TTSGGGTTTHHHHHHHHHHTTEEEEEEEES------SHHHHHHHHHHHHH-TT--TEEEEEE-----GGGGGGH
T ss_pred CcCccCCCChhhCcCHHHHHHHHHHcCCCEEEEcCC------CHHHhHHHHHHHhc-CC--CeEEEEecC--Ccchhhhh
Confidence 799999986 21 1 12333222 378888876532 22444444444433 22 224333343 55321
Q ss_pred ----HHHHHHH--HHcCCeeEE-EEeecCCccCCCCCccChH-HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHH
Q 019093 82 ----PDEIKLA--RKTGVVFAV-KLYPAGATTNSQDGVTDLF-GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVF 153 (346)
Q Consensus 82 ----~~el~~l--~~~G~v~~~-Kif~~~~~~~~~~~~~d~~-~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~a 153 (346)
.+++.++ .+..-+.++ .+=+.+.... .... +.| ..+.+.|+.++++++|+.+||.+.
T Consensus 70 ~~~~~~~l~~l~~~~~~~~~aIGEiGLD~~~~~-~~~~-~~Q~~vF~~ql~lA~~~~~pv~iH~r~a------------- 134 (255)
T PF01026_consen 70 NEEDLEELEELINLNRPKVVAIGEIGLDYYWRN-EEDK-EVQEEVFERQLELAKELNLPVSIHCRKA------------- 134 (255)
T ss_dssp SHHHHHHHHHHHHHTSTTEEEEEEEEEETTTTS-SSGH-HHHHHHHHHHHHHHHHHTCEEEEEEESH-------------
T ss_pred hHHHHHHHHHHHHhccccceeeeeeccCccccc-CCcH-HHHHHHHHHHHHHHHHhCCcEEEecCCc-------------
Confidence 1345555 433335444 2211110000 0000 111 467788999999999999999983
Q ss_pred HHHHHHHHHHhCCCCc-EEEEccC--CHHHHHHHHccCCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC--hhh
Q 019093 154 IDTILQPLIQRLPQLK-VVMEHIT--TMDAVKFVESCKEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIH 228 (346)
Q Consensus 154 v~~~l~~~la~~~g~~-lhi~HvS--t~~~l~~i~~akg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~--~~d 228 (346)
...+++ .+.+..+.+ -.|.|.- +.+.++.+.+ ..++.- ++|.+-. .++
T Consensus 135 ~~~~l~-il~~~~~~~~~~i~H~f~g~~~~~~~~~~---~g~~~S-----------------------~~~~~~~~~~~~ 187 (255)
T PF01026_consen 135 HEELLE-ILKEYGPPNLRVIFHCFSGSPEEAKKFLD---LGCYFS-----------------------FSGAITFKNSKK 187 (255)
T ss_dssp HHHHHH-HHHHTTGGTSEEEETT--S-HHHHHHHHH---TTEEEE-----------------------EEGGGGSTTSHH
T ss_pred HHHHHH-HHHhccccceeEEEecCCCCHHHHHHHHh---cCceEE-----------------------ecccccccccHH
Confidence 223332 233332211 4577873 3444443332 112222 2221111 123
Q ss_pred HHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHH--hcCCHHHHHHHHchhhhhhcC
Q 019093 229 RQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFE--EMGALDKLEAFTSFNGPDFYG 302 (346)
Q Consensus 229 ~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~--~~~~l~~lv~~~s~nPAki~g 302 (346)
...+...+--..| ++-||- |+....+. .|-+.-+..++-....+. +..+++++.+.+..|..++||
T Consensus 188 ~~~~~~~ip~dri--llETD~-P~~~~~~~-----~~~~~~p~~i~~~~~~la~~~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 188 VRELIKAIPLDRI--LLETDA-PYLAPDPY-----RGKPNEPSNIPKVAQALAEIKGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp HHHHHHHS-GGGE--EEE-BT-TSSECTTS-----TTSE--GGGHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCChhhE--EEcCCC-CcCCcccc-----CCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhC
Confidence 3345566644443 468994 65432211 122333334554443222 345899999999999999997
No 123
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=97.25 E-value=0.05 Score=50.34 Aligned_cols=138 Identities=16% Similarity=0.190 Sum_probs=73.2
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCC-CCcEEEEccCC--HHHHHHHHccCCCeeE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLP-QLKVVMEHITT--MDAVKFVESCKEGFVA 193 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~-g~~lhi~HvSt--~~~l~~i~~akg~~vt 193 (346)
..+.+-++.++++++|+++|+-+.. ...++ .|.++. ..+ -|.|.=| .+.++.+-.. |
T Consensus 112 ~~F~~ql~lA~~~~lPviIH~R~A~-------------~d~~~-iL~~~~~~~~-gi~HcFsGs~e~a~~~~d~-G---- 171 (256)
T COG0084 112 EVFEAQLELAKELNLPVIIHTRDAH-------------EDTLE-ILKEEGAPVG-GVLHCFSGSAEEARKLLDL-G---- 171 (256)
T ss_pred HHHHHHHHHHHHcCCCEEEEccccH-------------HHHHH-HHHhcCCCCC-EEEEccCCCHHHHHHHHHc-C----
Confidence 4566778999999999999999852 22331 233332 244 3556543 3333322211 2
Q ss_pred EEccchhhccchhhhccCCCCCceEEeCCCCC--hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093 194 ATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR--EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV 271 (346)
Q Consensus 194 ~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~--~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~ 271 (346)
.|+.++ +.+-- .+....+...+--..+ ++=||. |+-.-. ...|-.+-+.
T Consensus 172 -----~yisis----------------G~itfk~a~~~~ev~~~iPldrL--L~ETDs-Pyl~P~-----p~rGkrNeP~ 222 (256)
T COG0084 172 -----FYISIS----------------GIVTFKNAEKLREVARELPLDRL--LLETDA-PYLAPV-----PYRGKRNEPA 222 (256)
T ss_pred -----eEEEEC----------------ceeecCCcHHHHHHHHhCCHhHe--EeccCC-CCCCCc-----CCCCCCCCch
Confidence 122221 11111 1233345455443333 256885 774211 1124333444
Q ss_pred HHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCC
Q 019093 272 ALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 272 ~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl 303 (346)
.++...+.+.+ ..+.+++.+.++.|--++||+
T Consensus 223 ~v~~v~~~iAelk~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 223 YVRHVAEKLAELKGISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 56655543333 348999999999999999985
No 124
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=97.19 E-value=0.053 Score=50.23 Aligned_cols=138 Identities=16% Similarity=0.132 Sum_probs=73.2
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC--cEEEEccCCHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL--KVVMEHITTMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~--~lhi~HvSt~~~l~~i~~akg~~vt~ 194 (346)
..+.+.++.++++++||++|+.+.. ..++ .+.+..+. +. |.|.=| .+.+..+++-....
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~-------------~~~~--~il~~~~~~~~~-i~H~fs-G~~~~a~~~l~~G~-- 174 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTH-------------DKLA--MHLKRHDLPRTG-VVHGFS-GSLQQAERFVQLGY-- 174 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCcc-------------HHHH--HHHHhcCCCCCe-EEEcCC-CCHHHHHHHHHCCC--
Confidence 4677888999999999999999742 1222 12222222 33 445433 22333333210111
Q ss_pred EccchhhccchhhhccCCCCCceEEeCCC---CChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhH
Q 019093 195 TVTPQHLVLNRNALFQGGLRPHNYCLPVL---KREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPV 271 (346)
Q Consensus 195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPL---R~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~ 271 (346)
|+ -+++.+ +.++-| .+.+.+-.+.| . +.||. |+..... ..|-++-..
T Consensus 175 -----~i----------------S~~g~it~~~~~~~~-~~~~~ipldri-L-~ETD~-P~l~p~~-----~~~~~n~p~ 224 (258)
T PRK11449 175 -----KI----------------GVGGTITYPRASKTR-DVIAKLPLASL-L-LETDA-PDMPLNG-----FQGQPNRPE 224 (258)
T ss_pred -----EE----------------EeCccccccCcHHHH-HHHHhCChhhE-E-EecCC-CCCCCCC-----CCCCCCCCh
Confidence 11 122222 223333 45566655665 4 79996 7742110 113333334
Q ss_pred HHHHHHHH-HH-hcCCHHHHHHHHchhhhhhcCC
Q 019093 272 ALSLYAKV-FE-EMGALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 272 ~lp~l~~~-~~-~~~~l~~lv~~~s~nPAki~gl 303 (346)
.++-.+.. .. +..+.+.+.+.+..|-.++||+
T Consensus 225 ~~~~~~~~ia~l~~~~~~el~~~~~~N~~~lf~~ 258 (258)
T PRK11449 225 QAARVFDVLCELRPEPADEIAEVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 45554432 22 2347889999999999999986
No 125
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0029 Score=60.98 Aligned_cols=157 Identities=15% Similarity=0.125 Sum_probs=91.2
Q ss_pred eEEecCccccceecCCCccccccccccCCceeEEEeC---CCCC--CCCCcHHHHHHHHHHHHhhCCC-CccEEEEEEEE
Q 019093 2 ELTLTQPDDWHLHLRDGDLLKAVVPHSVSHYGRAIVM---PNLK--PPITTTAAAVAYRESILKALPA-SSNFTPLMTLY 75 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~g~~~ke~~~s~sGGvTtvv~m---Pnt~--p~~~~~~~~~~~~~~~~~~~~~-~vd~~~~~~~~ 75 (346)
++|--|.||.|+||=.++.-.+-+. .|+||++-= |.+. ....++.. ...+++-++... .++++|.+--
T Consensus 125 ~I~TAGGiDtHiHfI~Pqqi~~Al~---sGiTtmiGGGtGpa~Gt~aTT~TpG~--w~i~rMl~a~d~~p~N~g~lgKG- 198 (568)
T COG0804 125 KIVTAGGIDTHIHFICPQQIEEALA---SGITTMIGGGTGPADGTNATTCTPGP--WHIARMLQAADGLPMNIGFLGKG- 198 (568)
T ss_pred eEEeeccccceeEEecHHHHHHHHh---cCcEEEecCccCCCCCcccccccCCH--HHHHHHHHhhhcCceeeEEeecC-
Confidence 4677899999999864322223333 455555441 3221 11112221 222233222211 2788776542
Q ss_pred eCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHH
Q 019093 76 LTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFID 155 (346)
Q Consensus 76 ~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~ 155 (346)
+ .....-|.+.+++| .+|+|++-.+ +..- ..+..+|+-+-+.+.-|++|...-. |+-
T Consensus 199 -n-~s~~~~L~Eqi~aG-a~GlKlHEDW-------G~Tp--aaI~~~L~VAD~~DvqVaiHtDTLN--------EsG--- 255 (568)
T COG0804 199 -N-ASNPAPLAEQIEAG-AIGLKLHEDW-------GATP--AAIDTCLSVADEYDVQVAIHTDTLN--------ESG--- 255 (568)
T ss_pred -C-CCCchhHHHHHhhc-cceeEeeccc-------CCCH--HHHHHHHhhhhhhceEEEEeecccc--------ccc---
Confidence 2 23455688888889 6899998533 3323 6788899999999999999987421 111
Q ss_pred HHHHHHHHhCCCCcEEEEccCC---HHHHHHHHccC
Q 019093 156 TILQPLIQRLPQLKVVMEHITT---MDAVKFVESCK 188 (346)
Q Consensus 156 ~~l~~~la~~~g~~lhi~HvSt---~~~l~~i~~ak 188 (346)
.+++.++.+.|.-+|-.|.-- .-+=++|+-+.
T Consensus 256 -fvEdTi~A~~gRtIHtyHtEGAGGGHAPDiikv~~ 290 (568)
T COG0804 256 -FVEDTIAAIKGRTIHTYHTEGAGGGHAPDIIKVAG 290 (568)
T ss_pred -chHhHHHHhcCceeEEeeccCCCCCCccHHHHHcc
Confidence 223356777788899999753 23445666543
No 126
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=96.85 E-value=0.0021 Score=60.36 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=48.1
Q ss_pred HHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHH--HHHHhcCCHHHHHHHHchhhhhhcCC-CCC--
Q 019093 232 VVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYA--KVFEEMGALDKLEAFTSFNGPDFYGL-PRN-- 306 (346)
Q Consensus 232 L~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~--~~~~~~~~l~~lv~~~s~nPAki~gl-~~k-- 306 (346)
-.+....|.+|+ ++||..|.+ +|...+ .......+|++.+++.|.|||+.+|| +++
T Consensus 286 A~ela~~glLDi-LsSDY~P~S------------------Ll~A~F~La~~~~~~~lpqAvalvt~nPA~algl~DRG~I 346 (377)
T COG3454 286 ARELAQHGLLDI-LSSDYVPAS------------------LLHAAFRLADLGSNISLPQAVALVTKNPARALGLTDRGRI 346 (377)
T ss_pred HHHHHhCCceee-ecccCCcHH------------------HHHHHHHHhhhhcccCHHHHHHHhccCHHHhcCCCccccc
Confidence 345677899999 999999975 233322 22223348999999999999999999 554
Q ss_pred ----CccEEEEe
Q 019093 307 ----TSKIKLTK 314 (346)
Q Consensus 307 ----dAdlvi~d 314 (346)
.|||+.+.
T Consensus 347 a~GlrADlv~v~ 358 (377)
T COG3454 347 APGLRADLVRVR 358 (377)
T ss_pred ccccccceEEEe
Confidence 89999874
No 127
>PRK09875 putative hydrolase; Provisional
Probab=96.64 E-value=0.054 Score=51.14 Aligned_cols=146 Identities=12% Similarity=0.172 Sum_probs=82.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCC---cEEEEccCCHHHHHHHHcc--CCCe
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQL---KVVMEHITTMDAVKFVESC--KEGF 191 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~---~lhi~HvSt~~~l~~i~~a--kg~~ 191 (346)
..+..+.+..+++|.||.+|++-... .. ..+ .+.+..|+ |+.|.|+.....++.+++. +|.
T Consensus 139 kvl~Aaa~a~~~TG~pi~~Ht~~~~~----------g~-e~l--~il~e~Gvd~~rvvi~H~d~~~d~~~~~~l~~~G~- 204 (292)
T PRK09875 139 KVFIAAALAHNQTGRPISTHTSFSTM----------GL-EQL--ALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGA- 204 (292)
T ss_pred HHHHHHHHHHHHHCCcEEEcCCCccc----------hH-HHH--HHHHHcCcCcceEEEeCCCCCCCHHHHHHHHHcCC-
Confidence 45666677788999999999875421 11 223 34455576 8999999643444444432 244
Q ss_pred eEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH-HHHHHHHcC-CccEEeecCCCCCCccccccCCCCCCccch
Q 019093 192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ-AVVSAVTSG-SRKFFLGTDSAPHERGRKECACGCAGIYNA 269 (346)
Q Consensus 192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~-aL~~al~~G-~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~ 269 (346)
+.|-+ .+ |.+.+ .| .+.|. +|...+..| .=.+++++|=... . .+...|-+|.
T Consensus 205 -~l~fD----~~--------g~~~~---~p----d~~r~~~i~~L~~~Gy~drilLS~D~~~~-----~-~~~~~gg~G~ 258 (292)
T PRK09875 205 -YVQFD----TI--------GKNSY---YP----DEKRIAMLHALRDRGLLNRVMLSMDITRR-----S-HLKANGGYGY 258 (292)
T ss_pred -EEEec----cC--------CCccc---CC----HHHHHHHHHHHHhcCCCCeEEEeCCCCCc-----c-cccccCCCCh
Confidence 44432 01 11111 12 23444 444455667 3345577776322 1 1112233566
Q ss_pred hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcC
Q 019093 270 PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYG 302 (346)
Q Consensus 270 e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~g 302 (346)
.+.+.-+.-.+.++| +-+++-+++..||+|+|+
T Consensus 259 ~~i~~~~ip~L~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 259 DYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHCHHHHhC
Confidence 666665554445554 788999999999999985
No 128
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=96.63 E-value=0.028 Score=50.33 Aligned_cols=151 Identities=21% Similarity=0.161 Sum_probs=79.3
Q ss_pred ccccceecCC-CccccccccccC-CceeEEEeCCCCCCCCCcHHHHHHHHHHHHhh-----CCCCccEEEEEEEEeCCCC
Q 019093 8 PDDWHLHLRD-GDLLKAVVPHSV-SHYGRAIVMPNLKPPITTTAAAVAYRESILKA-----LPASSNFTPLMTLYLTDTT 80 (346)
Q Consensus 8 ~ID~HvH~r~-g~~~ke~~~s~s-GGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~-----~~~~vd~~~~~~~~~~~~~ 80 (346)
.||.|+|+.. +.+ |++.-+ -|+-+|+......-+..+++.+.+..++.-.. +...++..+ +++.+|..
T Consensus 2 ~iD~HiH~d~r~~e---DlekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~v--avGvHPr~ 76 (254)
T COG1099 2 YIDSHIHLDVRGFE---DLEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKV--AVGVHPRA 76 (254)
T ss_pred ccccccccccccHH---HHHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeE--EeccCCCC
Confidence 5899999865 443 333322 45555555433223456778888777764321 111144433 44446544
Q ss_pred CHHHH-------HHHHH-cCCeeEEEEeecCCccCCCCCccCh-HHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHH
Q 019093 81 SPDEI-------KLARK-TGVVFAVKLYPAGATTNSQDGVTDL-FGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREK 151 (346)
Q Consensus 81 ~~~el-------~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~-~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~ 151 (346)
.+.++ .++.. .+ |++|- ..+.. ..++. -..+.+-|+.+++++.|+++|.=...- .
T Consensus 77 iP~e~~~~l~~L~~~l~~e~-VvAiG-----EiGLe--~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK--------~ 140 (254)
T COG1099 77 IPPELEEVLEELEELLSNED-VVAIG-----EIGLE--EATDEEKEVFREQLELARELDVPVIVHTPRRNK--------K 140 (254)
T ss_pred CCchHHHHHHHHHhhcccCC-eeEee-----ecccc--cCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--------h
Confidence 33333 33322 23 43431 00100 11121 146778899999999999999764321 2
Q ss_pred HHHHHHHHHHHHhCCC---CcEEEEccCCHHHHH
Q 019093 152 VFIDTILQPLIQRLPQ---LKVVMEHITTMDAVK 182 (346)
Q Consensus 152 ~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~ 182 (346)
++..+++ .+....| -.+.|-|+ +.+.++
T Consensus 141 e~t~~il--di~~~~~l~~~lvvIDH~-N~etv~ 171 (254)
T COG1099 141 EATSKIL--DILIESGLKPSLVVIDHV-NEETVD 171 (254)
T ss_pred hHHHHHH--HHHHHcCCChhheehhcc-cHHHHH
Confidence 2344555 3443333 45778887 455666
No 129
>PRK10425 DNase TatD; Provisional
Probab=96.60 E-value=0.49 Score=43.86 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=26.0
Q ss_pred chhHHHHHHHHHHHh--cCCHHHHHHHHchhhhhhcCC
Q 019093 268 NAPVALSLYAKVFEE--MGALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 268 g~e~~lp~l~~~~~~--~~~l~~lv~~~s~nPAki~gl 303 (346)
+-...++.....+.+ ..+.+++.+.+..|--++||+
T Consensus 221 n~P~~i~~v~~~iA~l~~~~~~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 221 NEPAFLPHILQRIAHWRGEDAAWLAATTDANARTLFGL 258 (258)
T ss_pred CCcHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhCc
Confidence 334556666544333 348999999999999999986
No 130
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.41 E-value=0.04 Score=53.59 Aligned_cols=72 Identities=11% Similarity=0.001 Sum_probs=48.4
Q ss_pred HHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHH--HHHHHH--hcCCHHHHHHHHchhhhhhcCCCC----
Q 019093 234 SAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSL--YAKVFE--EMGALDKLEAFTSFNGPDFYGLPR---- 305 (346)
Q Consensus 234 ~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~--l~~~~~--~~~~l~~lv~~~s~nPAki~gl~~---- 305 (346)
+.|..|.+-- +|||-+|.+.-+ -+-..+|+ .+.... .+.+++++..+.+-|.|+.+|+..
T Consensus 316 ~lL~~~v~Vg-LGtDv~~~s~l~-----------a~r~A~~~s~hL~~~~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs 383 (439)
T KOG3968|consen 316 ELLDIGVIVG-LGTDVSGCSILN-----------ALRQAMPMSMHLACVLDVMKLSMEEALYLATIGGAKALGRDDTHGS 383 (439)
T ss_pred HHHhcCceEe-ecCCccccccHH-----------HHHHHHHHHHHHHhccCcccCCHHHHHHHHhccchhhccCCCcccc
Confidence 4567788888 899998853211 01112222 222222 246899999999999999999954
Q ss_pred ----CCccEEEEe-cce
Q 019093 306 ----NTSKIKLTK-IPW 317 (346)
Q Consensus 306 ----kdAdlvi~d-~~~ 317 (346)
|.+|++++| ..|
T Consensus 384 ~eVGK~fDai~id~s~~ 400 (439)
T KOG3968|consen 384 LEVGKYFDAIIIDLSAP 400 (439)
T ss_pred eecccccceEEEeCCCC
Confidence 389999999 555
No 131
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=94.90 E-value=0.093 Score=51.23 Aligned_cols=176 Identities=12% Similarity=0.048 Sum_probs=97.8
Q ss_pred eEEecCccccceecCC-Ccc---ccccc-----cccCCceeEEEeCCCCCCCCCcHHHHHHHHHHHHhhCCCCccEEEEE
Q 019093 2 ELTLTQPDDWHLHLRD-GDL---LKAVV-----PHSVSHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLM 72 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~-g~~---~ke~~-----~s~sGGvTtvv~mPnt~p~~~~~~~~~~~~~~~~~~~~~~vd~~~~~ 72 (346)
.+|+||+||.|+|+.. +.. ...+. +...||+||++||+++.+.....+.+....+.+.+... ..|..++
T Consensus 50 ~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~v~~~~ 127 (387)
T cd01308 50 KILVPGFIDQHVHIIGGGGEGGPSTRTPEVTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGI--TCFVYTG 127 (387)
T ss_pred CEEccCeeehhhCcccccCCCcccccCHHHHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCC--EEEEEec
Confidence 4799999999999865 211 11111 11249999999999665554556655555544443322 2332222
Q ss_pred EEEeCCCC---CH-HHHHHHHH---cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCC------cEEEecCC
Q 019093 73 TLYLTDTT---SP-DEIKLARK---TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM------PLLVHGEV 139 (346)
Q Consensus 73 ~~~~~~~~---~~-~el~~l~~---~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~------~v~vHaE~ 139 (346)
........ .. .++..+.+ .| +.+++-+. ..-... ..+.+++++++..+. .+.+|...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~i~~~~~~g-~~~~~~~~--------~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~vh~~~ 197 (387)
T cd01308 128 SYEVPTRTITGSIRKDLLLIDKVIGVG-EIAISDHR--------SSQPTV-EELARIAAEARVGGLLGGKAGIVHIHLGD 197 (387)
T ss_pred ccCCCCcCchhhHHHHHHHHHHhcCcc-eEEEcCCC--------CCCCCH-HHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11001000 01 12322211 12 22322111 111233 677788888875332 36666664
Q ss_pred CCCCCChhhhHHHHHHHHHHHHHHhCCCCcE-EEEccCCHHHHH----HHHccC-C--CeeEEEccchhh
Q 019093 140 TDPIVDIFDREKVFIDTILQPLIQRLPQLKV-VMEHITTMDAVK----FVESCK-E--GFVAATVTPQHL 201 (346)
Q Consensus 140 ~~~~~~~~~~E~~av~~~l~~~la~~~g~~l-hi~HvSt~~~l~----~i~~ak-g--~~vt~Et~ph~L 201 (346)
. ..++.+++ .+.+..|+++ |++|.++..+.+ .++.++ | +.+.++++|||+
T Consensus 198 ~----------~~~~~~i~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~ 255 (387)
T cd01308 198 G----------KRALSPIF--ELIEETEIPITQFLPTHINRTAPLFEQGVEFAKMGGTIDLTSSIDPQFR 255 (387)
T ss_pred c----------hHHHHHHH--HHHHhcCCCcceeECCcccCCHHHHHHHHHHHHcCCcEEEECCCCcccc
Confidence 3 23566666 5777779988 999999877777 455554 4 577888899877
No 132
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=93.12 E-value=2 Score=39.68 Aligned_cols=135 Identities=17% Similarity=0.173 Sum_probs=78.4
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EEEEccCCHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHITTMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lhi~HvSt~~~l~~i~~akg~~vt~ 194 (346)
..|..+|+.+++.|++|.+|.|+.+- +.+.++- .+|+..|.+ -.+.|-+++.- ..|
T Consensus 145 ~vl~~a~elA~dvdc~vqLHtes~~~---------~~~~~i~--~~ak~~G~~~~~VVkHha~p~v-----------~~~ 202 (285)
T COG1831 145 EVLEYAMELAKDVDCAVQLHTESLDE---------ETYEEIA--EMAKEAGIKPYRVVKHHAPPLV-----------LKC 202 (285)
T ss_pred HHHHHHHHHhhcCCCcEEEecCCCCh---------HHHHHHH--HHHHHhCCCcceeEeecCCccc-----------hhh
Confidence 56788999999999999999998642 1233344 466677752 23444433211 112
Q ss_pred EccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHH
Q 019093 195 TVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALS 274 (346)
Q Consensus 195 Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp 274 (346)
|. .| ++|.+- ..|..+.++++.|.-=+ +=||.. +++..+-..-|--. +|
T Consensus 203 ~~--------------~G------i~pSV~--asr~~v~~a~~~g~~Fm-mETDyI----DDp~RpgavL~Pkt----VP 251 (285)
T COG1831 203 EE--------------VG------IFPSVP--ASRKNVEDAAELGPRFM-METDYI----DDPRRPGAVLGPKT----VP 251 (285)
T ss_pred hh--------------cC------cCCccc--ccHHHHHHHHhcCCceE-eecccc----cCcccCCCcCCccc----hh
Confidence 21 01 233332 45557888888888666 888863 34332211113222 44
Q ss_pred HHHHHHHhcC--CHHHHHHHHchhhhhhcCCC
Q 019093 275 LYAKVFEEMG--ALDKLEAFTSFNGPDFYGLP 304 (346)
Q Consensus 275 ~l~~~~~~~~--~l~~lv~~~s~nPAki~gl~ 304 (346)
-=...+.+++ +-+.+.+.+-.||.++||+.
T Consensus 252 rr~~~i~~~g~~~ee~vy~i~~E~pe~VYg~~ 283 (285)
T COG1831 252 RRTREILEKGDLTEEDVYRIHVENPERVYGIE 283 (285)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhCHHHHhCcc
Confidence 2111122344 57889999999999999973
No 133
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=92.37 E-value=0.24 Score=47.16 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=77.6
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC---CcEEEEccCCHHHHHHHHcc--CCCe
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ---LKVVMEHITTMDAVKFVESC--KEGF 191 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g---~~lhi~HvSt~~~l~~i~~a--kg~~ 191 (346)
..++.+-+..+++|+||++|++-..- .-.| +.+++ +..| -++.|+|+-....++.+++. +|..
T Consensus 142 k~lrAaa~A~~~TG~pI~~H~~~g~~----~~~e---~~~il-----~e~Gv~~~rvvigH~D~~~D~~y~~~la~~G~~ 209 (308)
T PF02126_consen 142 KVLRAAARAHKETGAPISTHTGRGTR----MGLE---QLDIL-----EEEGVDPSRVVIGHMDRNPDLDYHRELADRGVY 209 (308)
T ss_dssp HHHHHHHHHHHHHT-EEEEEESTTGT----CHHH---HHHHH-----HHTT--GGGEEETSGGGST-HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHhCCeEEEcCCCCCc----CHHH---HHHHH-----HHcCCChhHeEEeCCCCCCCHHHHHHHHhcCCE
Confidence 34555556668889999999986530 0112 11222 2224 47999999976666665543 2666
Q ss_pred eEEEccchhhccchhhhccCCCCCceEEeCCCC--ChhhH-HHHHHHHHcCCcc-EEeecCCCCCCccccccCCCCCCcc
Q 019093 192 VAATVTPQHLVLNRNALFQGGLRPHNYCLPVLK--REIHR-QAVVSAVTSGSRK-FFLGTDSAPHERGRKECACGCAGIY 267 (346)
Q Consensus 192 vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR--~~~d~-~aL~~al~~G~Id-~~i~SDHaP~~~~~K~~~~~~~G~~ 267 (346)
+..++..+.++ ++ ..||.+. +.++| +.|.+.+..|-.| ++++.|=+-.+ +...++..| .
T Consensus 210 l~~D~~g~~~~---------g~----~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~---~~~~~gg~g-~ 272 (308)
T PF02126_consen 210 LEFDTIGREFS---------GK----DKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKS---RLYRYGGGG-Y 272 (308)
T ss_dssp EEETTTT-B-T---------TT----TTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEE---GSSSCCHHH-H
T ss_pred EEecCCccccc---------Cc----ccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccccc---cccccCCCC-c
Confidence 66555543221 10 0111111 23333 3555667788884 44666643311 110111112 2
Q ss_pred ch----hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhc
Q 019093 268 NA----PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFY 301 (346)
Q Consensus 268 g~----e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~ 301 (346)
|. +..+|.|. ++| +-+++-+++..||+|+|
T Consensus 273 ~~~~i~~~fiP~L~----~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 273 GYIYILTRFIPRLK----ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp TTTHHHHTHHHHHH----HTTS-HHHHHHHHTHHHHHHH
T ss_pred cHHHHHHHHHHHHH----HcCCCHHHHHHHHHHCHHHHc
Confidence 22 44555443 344 77899999999999997
No 134
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=90.03 E-value=8.6 Score=35.36 Aligned_cols=112 Identities=12% Similarity=0.037 Sum_probs=67.3
Q ss_pred HHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCC-CCCC-C--hhhhHHHHHHHH
Q 019093 82 PDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVT-DPIV-D--IFDREKVFIDTI 157 (346)
Q Consensus 82 ~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~-~~~~-~--~~~~E~~av~~~ 157 (346)
.+.+.++.+.| +.++-+|+........... +. ..+.++-+.+++.|+.+.+|+--. .+.. + ........+.+.
T Consensus 13 ~~~~~~~~~~G-~~~vel~~~~~~~~~~~~~-~~-~~~~~l~~~~~~~gl~ls~h~p~~~nl~s~d~~~r~~~~~~l~~~ 89 (273)
T smart00518 13 YKAFIEAVDIG-ARSFQLFLGNPRSWKGVRL-SE-ETAEKFKEALKENNIDVSVHAPYLINLASPDKEKVEKSIERLIDE 89 (273)
T ss_pred hHHHHHHHHcC-CCEEEEECCCCCCCCCCCC-CH-HHHHHHHHHHHHcCCCEEEECCceecCCCCCHHHHHHHHHHHHHH
Confidence 35677777888 7889988753211111112 22 456677777778899999997421 1211 1 122333456667
Q ss_pred HHHHHHhCCCCcEEEEccCC------HH-------HHHHHHccC-CCeeEEEccc
Q 019093 158 LQPLIQRLPQLKVVMEHITT------MD-------AVKFVESCK-EGFVAATVTP 198 (346)
Q Consensus 158 l~~~la~~~g~~lhi~HvSt------~~-------~l~~i~~ak-g~~vt~Et~p 198 (346)
+ .+|+..|++..+.|... .+ +++.+.+.+ |+.+..|.+|
T Consensus 90 i--~~A~~lGa~~vv~h~g~~~~~~~e~~~~~~~~~l~~l~~~~~gv~l~lEn~~ 142 (273)
T smart00518 90 I--KRCEELGIKALVFHPGSYLKQSKEEALNRIIESLNEVIDETKGVVILLETTA 142 (273)
T ss_pred H--HHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHHHHhccCCcEEEEeccC
Confidence 7 68999999998888753 23 222222223 6788889875
No 135
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=89.51 E-value=19 Score=34.05 Aligned_cols=68 Identities=15% Similarity=0.081 Sum_probs=42.0
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 195 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~E 195 (346)
..+.++++.+++.|.++.+|+....- .. .+...+ .... +..=.|..+++ ..+.++++++ ..+.++
T Consensus 173 ~~~~~~~~~A~~~g~~v~~H~~E~~~-----~~---~~~~a~--~~~g-~~~i~H~~~l~~~~~~~~~l~~---~gi~v~ 238 (325)
T cd01320 173 EKFVRAFQRAREAGLRLTAHAGEAGG-----PE---SVRDAL--DLLG-AERIGHGIRAIEDPELVKRLAE---RNIPLE 238 (325)
T ss_pred HHHHHHHHHHHHCCCceEEeCCCCCC-----HH---HHHHHH--HHcC-CcccchhhccCccHHHHHHHHH---cCCeEE
Confidence 67889999999999999999864311 01 121222 1011 12223555555 3557888876 358889
Q ss_pred ccc
Q 019093 196 VTP 198 (346)
Q Consensus 196 t~p 198 (346)
+||
T Consensus 239 ~~P 241 (325)
T cd01320 239 VCP 241 (325)
T ss_pred ECC
Confidence 999
No 136
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=88.58 E-value=1.2 Score=39.86 Aligned_cols=47 Identities=13% Similarity=0.052 Sum_probs=27.0
Q ss_pred ccccceecC----CCccccc-ccccc----CCceeEEEeCCC-CCCCCCc-HHHHHHH
Q 019093 8 PDDWHLHLR----DGDLLKA-VVPHS----VSHYGRAIVMPN-LKPPITT-TAAAVAY 54 (346)
Q Consensus 8 ~ID~HvH~r----~g~~~ke-~~~s~----sGGvTtvv~mPn-t~p~~~~-~~~~~~~ 54 (346)
+||+|+|+= +|..+.| ++.-. .-|+|++|.-|. .+|.-.| .+.+..+
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTsHh~~g~y~n~~~~v~~~ 58 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATSHHLHGRYENPIEKVKEK 58 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecccccCCccCChHHHHHHH
Confidence 599999973 2443332 33221 289999999984 3444443 3433333
No 137
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=87.65 E-value=0.2 Score=48.98 Aligned_cols=15 Identities=27% Similarity=0.208 Sum_probs=12.1
Q ss_pred EEecCccccceecCC
Q 019093 3 LTLTQPDDWHLHLRD 17 (346)
Q Consensus 3 ~vlPG~ID~HvH~r~ 17 (346)
+|+||+||.|+|+-.
T Consensus 1 ~v~PGfiD~H~H~~~ 15 (404)
T PF07969_consen 1 TVMPGFIDSHTHLDS 15 (404)
T ss_dssp EEEE-EEEEEEEHTT
T ss_pred CCccChhHHhhChHH
Confidence 589999999999753
No 138
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=87.53 E-value=6.4 Score=37.17 Aligned_cols=155 Identities=15% Similarity=0.136 Sum_probs=82.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCC-CcEEEEccC-CHHHHHHHHccC--CCee
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQ-LKVVMEHIT-TMDAVKFVESCK--EGFV 192 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g-~~lhi~HvS-t~~~l~~i~~ak--g~~v 192 (346)
..|+.+-+..+++|.|+.+|.+-..+ + -| ..+++ .++-.+ .++.|+|+. +.+-+.-.+..+ |..+
T Consensus 152 k~lrAaA~A~~~Tg~Pi~tHt~~gt~--g---~e---q~~il---~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l 220 (316)
T COG1735 152 KSLRAAARAHKETGAPISTHTPAGTM--G---LE---QLRIL---AEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFL 220 (316)
T ss_pred HHHHHHHHHhhhcCCCeEEeccchhh--h---HH---HHHHH---HHcCCChhHeeEeccCCCCChHHHHHHHHhcCceE
Confidence 46677777778899999999986542 1 11 11222 233222 368999999 777777666655 4433
Q ss_pred EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHH-HHHHHHHcCCccEEeec-CCCCCCccccccCCC-CCCccch
Q 019093 193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQ-AVVSAVTSGSRKFFLGT-DSAPHERGRKECACG-CAGIYNA 269 (346)
Q Consensus 193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~-aL~~al~~G~Id~~i~S-DHaP~~~~~K~~~~~-~~G~~g~ 269 (346)
..+. .| .-+..| .++|. .+.+-+.+|--|-+.-| |-+.....-+...-. ..|-.|.
T Consensus 221 ~fD~--------------iG---~d~y~p----d~~r~~~~~~l~~~gy~d~i~ls~d~~~~~~~~~~~~~~~~~~~~g~ 279 (316)
T COG1735 221 EFDR--------------IG---KDKYYP----DEDRIAPLLELVARGYADLILLSHDDICLSDDVFLKSMLKANGGWGY 279 (316)
T ss_pred Eecc--------------cC---ccccCc----HHHhhhhHHHHHHhhHhhheecccchhhhhhhHHHHhhhhhcCCccc
Confidence 2221 11 111222 45544 45556667776665666 333332222111100 1122233
Q ss_pred hHHHHHHHHHHHhcC-CHHHHHHHHchhhhhhcCC
Q 019093 270 PVALSLYAKVFEEMG-ALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 270 e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAki~gl 303 (346)
-+.+--+.-.++++| +=+++-.++-.||+|+|..
T Consensus 280 ~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 280 GYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred chhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 233322222334454 6667888889999999975
No 139
>KOG4245 consensus Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=86.00 E-value=5 Score=35.55 Aligned_cols=192 Identities=15% Similarity=0.166 Sum_probs=96.9
Q ss_pred HHHHHHHHH-cCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCC-----h------hhh
Q 019093 82 PDEIKLARK-TGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVD-----I------FDR 149 (346)
Q Consensus 82 ~~el~~l~~-~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~-----~------~~~ 149 (346)
.+|+++.++ .| +.||.+=. + -....+ |. ..+..++..+.++.+.++||+=|...-.+ + ..+
T Consensus 82 vee~~rcvk~lg-~~g~eigs--h--v~e~~l-d~-~d~~ply~~~e~l~~~lfvhpwdmhmwdgrl~kywlpwlvgmpa 154 (297)
T KOG4245|consen 82 VEEMERCVKELG-FKGFEIGS--H--VAEKDL-DA-QDFFPLYAAAEELKCSLFVHPWDMHMWDGRLAKYWLPWLVGMPA 154 (297)
T ss_pred HHHHHHHHHHcC-CCceeecc--c--cccccC-ch-HHHhHHHHHHHhheeeEEecchhhcccccchHhhhhHHHhCCch
Confidence 457777774 56 67766521 0 011223 22 67888889999999999999988654221 0 234
Q ss_pred HH-HHHHHHH-HHHHHhCCCCcEEEEccCCHHHHHHHHcc--CCCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC
Q 019093 150 EK-VFIDTIL-QPLIQRLPQLKVVMEHITTMDAVKFVESC--KEGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR 225 (346)
Q Consensus 150 E~-~av~~~l-~~~la~~~g~~lhi~HvSt~~~l~~i~~a--kg~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~ 225 (346)
|. .|+-+++ .-.+.+++..++-+.|-.. +.-.|+-- .|.++.-+.|..---+....+. ..+...--.-+
T Consensus 155 eta~aics~img~i~~~fpklklcfahggg--a~p~~~grishg~n~rpdlca~~~~~~p~k~~-----g~~~tdalvhd 227 (297)
T KOG4245|consen 155 ETAIAICSMIMGGIFEKFPKLKLCFAHGGG--AFPFIRGRISHGFNMRPDLCAGDCKMAPKKLD-----GLFWTDALVHD 227 (297)
T ss_pred HHHHHHHHHHHhhHHHhCchheeeeecCCc--ccceeeeeeccCccCCcchhcCcCCCChhhhc-----cchhhhhhhcC
Confidence 54 3554443 2236788999999999653 22222210 0223322222211111111111 11212222223
Q ss_pred hhhHHHHHHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC
Q 019093 226 EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR 305 (346)
Q Consensus 226 ~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~ 305 (346)
+..-+-|++-+ |.=.+++|||. ||...|-+ +|- -+|.+= .-+-++=-++...|.-+++++.+
T Consensus 228 p~alell~~ti--gkd~iilgtdy-pfplgele-----~gk-liee~~---------~f~a~~ke~l~~~nal~~l~id~ 289 (297)
T KOG4245|consen 228 PKALELLIDTI--GKDHIILGTDY-PFPLGELE-----PGK-LIEEME---------EFDAEDKEDLKAGNALAFLDIDE 289 (297)
T ss_pred cHHHHHHHHhh--ccceEEeccCC-CCcCcccc-----cch-HHHhhc---------ccchhhHHHhhhccchhhcccch
Confidence 34455566666 44445578886 87655533 120 011111 11233444556778888888754
No 140
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=84.59 E-value=45 Score=33.14 Aligned_cols=124 Identities=14% Similarity=0.046 Sum_probs=73.1
Q ss_pred ccEEEEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCC---cEEEecCCCCC
Q 019093 66 SNFTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNM---PLLVHGEVTDP 142 (346)
Q Consensus 66 vd~~~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~---~v~vHaE~~~~ 142 (346)
+-++.|+++ ..+ -..-+.+..+.| ..+|-+|+...-.-....+.+ ..+.+.-+.+++.|+ ++++|+-=. +
T Consensus 131 ~~iGaHvSi--aGG-~~~a~~~a~~~g-~~afqiF~~npr~w~~~~~~~--~~~~~f~~~~~~~gi~~~~i~~HapYl-I 203 (413)
T PTZ00372 131 VYIGAHVSA--SGG-VDNSPINAYNIA-GQAFALFLKNQRTWNSPPLSD--ETIDKFKENCKKYNYDPKFILPHGSYL-I 203 (413)
T ss_pred ceEEEEEec--ccc-HHHHHHHHHHcC-CCEEEEEcCCCccCCCCCCCH--HHHHHHHHHHHHcCCCcceEEeecCce-e
Confidence 778888886 333 222345555668 589999974211111112333 566666667777765 377898732 2
Q ss_pred CC---C--hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC-------HHHHHHHHcc-------C-CCeeEEEccc
Q 019093 143 IV---D--IFDREKVFIDTILQPLIQRLPQLKVVMEHITT-------MDAVKFVESC-------K-EGFVAATVTP 198 (346)
Q Consensus 143 ~~---~--~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt-------~~~l~~i~~a-------k-g~~vt~Et~p 198 (346)
.. + .+..-...+.+.+ ..|...|++.++.|-.+ .++++.+.+. . ++.+..|+++
T Consensus 204 NLASpd~e~rekSv~~~~~eL--~rA~~LGa~~VV~HPGs~~~~~~~ee~i~~i~e~L~~~la~~~gV~IlLENma 277 (413)
T PTZ00372 204 NLANPDKEKREKSYDAFLDDL--QRCEQLGIKLYNFHPGSTVGQCSKEEGIKNIADCINKAHEETKSVIIVLENTA 277 (413)
T ss_pred cCCCCCHHHHHHHHHHHHHHH--HHHHHcCCCEEEECCCcCCCCCCHHHHHHHHHHHHHHHHhCcCCCEEEEecCC
Confidence 21 1 1222234555667 68999999999999876 4455554432 2 4667777655
No 141
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=84.53 E-value=0.86 Score=44.50 Aligned_cols=53 Identities=21% Similarity=0.248 Sum_probs=39.8
Q ss_pred CHHHHHHHHchhhhhhcCCCC-C-------CccEEEEe-cceeecCCc-------cccCCcccccCCCcE
Q 019093 285 ALDKLEAFTSFNGPDFYGLPR-N-------TSKIKLTK-IPWKVPEAF-------SFSFGDIIPMFAGNT 338 (346)
Q Consensus 285 ~l~~lv~~~s~nPAki~gl~~-k-------dAdlvi~d-~~~~v~~~~-------~~s~~~~sp~~~G~~ 338 (346)
++.++..++-.||||.+||+. | ||||.|.| .+-.|+.++ -++++.|+.- +|..
T Consensus 439 t~~eia~~TRa~~ak~lgl~e~kGhLg~GadadIaiYdlnP~~vDps~dye~v~kaf~~A~ytlK-~GeI 507 (575)
T COG1229 439 TLYELAIMTRANPAKVLGLSERKGHLGVGADADIAIYDLNPEQVDPSNDYEKVEKAFRKAAYTLK-GGEI 507 (575)
T ss_pred cHHHHHHHHhcChhhhcccccccCccCcCccCceEEEecChhhcCCcccHHHHHHHHhheeEEec-CceE
Confidence 578999999999999999964 4 99999999 777776432 2445666665 3543
No 142
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=84.33 E-value=1.1 Score=41.57 Aligned_cols=49 Identities=10% Similarity=0.249 Sum_probs=36.3
Q ss_pred HHHHHHH-HHhcC-CHHHHHHHHchhhhhhcCC-CCC-------CccEEEEecceeecC
Q 019093 273 LSLYAKV-FEEMG-ALDKLEAFTSFNGPDFYGL-PRN-------TSKIKLTKIPWKVPE 321 (346)
Q Consensus 273 lp~l~~~-~~~~~-~l~~lv~~~s~nPAki~gl-~~k-------dAdlvi~d~~~~v~~ 321 (346)
|+..... .+..+ +++-..+..+-.||+++|+ +.| |||||++|..-+|.+
T Consensus 336 Md~CvRhf~kATgCs~e~AleaAtlhPAqlLg~ek~KGTLDfG~dADFVllDd~l~V~a 394 (407)
T KOG3892|consen 336 MDVCVRHFLKATGCSMESALEAATLHPAQLLGLEKSKGTLDFGADADFVLLDDSLHVQA 394 (407)
T ss_pred cHHHHHHHHHhcCCcHHHHHhhhccChHHhhccccccccccccccCceEEEccceEEEE
Confidence 4444333 33356 7999999999999999999 455 899999996666654
No 143
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=84.22 E-value=0.4 Score=48.26 Aligned_cols=16 Identities=31% Similarity=0.096 Sum_probs=14.1
Q ss_pred eEEecCccccceecCC
Q 019093 2 ELTLTQPDDWHLHLRD 17 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~ 17 (346)
++|+||+||.|+|+..
T Consensus 34 ~~~~PGfiD~H~H~~~ 49 (479)
T cd01300 34 KTVLPGFIDSHSHLLL 49 (479)
T ss_pred CEEccCcccccccchh
Confidence 5799999999999854
No 144
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=83.90 E-value=36 Score=32.23 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=41.4
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EEEEccC-CHHHHHHHHccCCCeeE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESCKEGFVA 193 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lhi~HvS-t~~~l~~i~~akg~~vt 193 (346)
..+.++++.+++.|+++.+|+....- . .+ +...+ ...|+. .|-.+++ +.+.++++++. .+.
T Consensus 172 ~~~~~~~~~A~~~g~~i~~Ha~E~~~---~--~~---~~~~~-----~~~g~~ri~Hg~~l~~~~~~i~~l~~~---gi~ 235 (324)
T TIGR01430 172 PDFVRAFAIARELGLHLTVHAGELGG---P--ES---VREAL-----DDLGATRIGHGVRALEDPELLKRLAQE---NIT 235 (324)
T ss_pred HHHHHHHHHHHHCCCCeEEecCCCCC---h--HH---HHHHH-----HHcCchhcchhhhhccCHHHHHHHHHc---Cce
Confidence 67889999999999999999975311 0 01 11111 111322 2333443 35678888764 588
Q ss_pred EEccch
Q 019093 194 ATVTPQ 199 (346)
Q Consensus 194 ~Et~ph 199 (346)
+|+||.
T Consensus 236 v~~cP~ 241 (324)
T TIGR01430 236 LEVCPT 241 (324)
T ss_pred EEECCc
Confidence 899994
No 145
>PRK01060 endonuclease IV; Provisional
Probab=81.42 E-value=44 Score=30.73 Aligned_cols=111 Identities=9% Similarity=0.043 Sum_probs=62.5
Q ss_pred HHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCc---EEEecCCC-CCCC-Ch--hhhHHHHHHH
Q 019093 84 EIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMP---LLVHGEVT-DPIV-DI--FDREKVFIDT 156 (346)
Q Consensus 84 el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~---v~vHaE~~-~~~~-~~--~~~E~~av~~ 156 (346)
-+..+.+.| .-++.+|+........... +. ..+.++-+.+++.|+. +.+|+--. .+.. +. .......+.+
T Consensus 17 ~l~~~~~~G-~d~vEl~~~~p~~~~~~~~-~~-~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl~~~d~~~r~~s~~~~~~ 93 (281)
T PRK01060 17 AVAEAAEIG-ANAFMIFTGNPQQWKRKPL-EE-LNIEAFKAACEKYGISPEDILVHAPYLINLGNPNKEILEKSRDFLIQ 93 (281)
T ss_pred HHHHHHHcC-CCEEEEECCCCCCCcCCCC-CH-HHHHHHHHHHHHcCCCCCceEEecceEecCCCCCHHHHHHHHHHHHH
Confidence 456666778 7899988742111111112 22 4555555667777876 77787421 1111 11 2233345666
Q ss_pred HHHHHHHhCCCCcEEEEccCCH------H-HHH-------HHH-ccCCCeeEEEccch
Q 019093 157 ILQPLIQRLPQLKVVMEHITTM------D-AVK-------FVE-SCKEGFVAATVTPQ 199 (346)
Q Consensus 157 ~l~~~la~~~g~~lhi~HvSt~------~-~l~-------~i~-~akg~~vt~Et~ph 199 (346)
.+ .+|+..|++..+.|.... + +.+ .+. ++.|+.+..|+.|.
T Consensus 94 ~i--~~A~~lga~~vv~h~G~~~~~~~~~~~~~~~~e~l~~l~~~~~gv~l~iEn~~~ 149 (281)
T PRK01060 94 EI--ERCAALGAKLLVFHPGSHLGDIDEEDCLARIAESLNEALDKTQGVTIVLENTAG 149 (281)
T ss_pred HH--HHHHHcCCCEEEEcCCcCCCCCcHHHHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 67 688889999888887631 2 222 221 12278888998764
No 146
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=80.42 E-value=0.51 Score=48.26 Aligned_cols=16 Identities=38% Similarity=0.393 Sum_probs=14.4
Q ss_pred eEEecCccccceecCC
Q 019093 2 ELTLTQPDDWHLHLRD 17 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r~ 17 (346)
++|+||+||.|.|+-.
T Consensus 59 k~v~PGfvDaH~Hl~~ 74 (535)
T COG1574 59 KFVLPGFVDAHLHLIS 74 (535)
T ss_pred CEeccccchhhHHHHH
Confidence 5899999999999865
No 147
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=80.37 E-value=22 Score=32.63 Aligned_cols=73 Identities=16% Similarity=0.354 Sum_probs=39.2
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
..+.+..|.+.| +..+||= |. -+.+ ..+++++++.|+|+++-..-..+ .| |.+.+.
T Consensus 78 d~~s~d~l~~~~-~~~~KIa-----S~---dl~n-----~~lL~~~A~tgkPvIlSTG~stl------~E---I~~Av~- 133 (241)
T PF03102_consen 78 DEESVDFLEELG-VPAYKIA-----SG---DLTN-----LPLLEYIAKTGKPVILSTGMSTL------EE---IERAVE- 133 (241)
T ss_dssp SHHHHHHHHHHT--SEEEE------GG---GTT------HHHHHHHHTT-S-EEEE-TT--H------HH---HHHHHH-
T ss_pred CHHHHHHHHHcC-CCEEEec-----cc---cccC-----HHHHHHHHHhCCcEEEECCCCCH------HH---HHHHHH-
Confidence 345565666668 8999983 21 1223 46788899999999987775433 33 344442
Q ss_pred HHHhCCCCcEEEEccCC
Q 019093 161 LIQRLPQLKVVMEHITT 177 (346)
Q Consensus 161 ~la~~~g~~lhi~HvSt 177 (346)
.+.+..+.++.+.|+.|
T Consensus 134 ~~~~~~~~~l~llHC~s 150 (241)
T PF03102_consen 134 VLREAGNEDLVLLHCVS 150 (241)
T ss_dssp HHHHHCT--EEEEEE-S
T ss_pred HHHhcCCCCEEEEecCC
Confidence 23355677888888875
No 148
>PRK09358 adenosine deaminase; Provisional
Probab=76.39 E-value=72 Score=30.38 Aligned_cols=69 Identities=10% Similarity=-0.034 Sum_probs=42.5
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 195 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~E 195 (346)
..+.++++.+++.|+++.+|+....- .. .+...+ ... -+..=.|-++++ ..+.++++++. .+.+|
T Consensus 182 ~~~~~~~~~A~~~g~~~~~H~~E~~~-----~~---~~~~al--~~l-g~~ri~Hg~~l~~~~~~~~~l~~~---gi~v~ 247 (340)
T PRK09358 182 SKFARAFDRARDAGLRLTAHAGEAGG-----PE---SIWEAL--DEL-GAERIGHGVRAIEDPALMARLADR---RIPLE 247 (340)
T ss_pred HHHHHHHHHHHHCCCCeEEcCCCCCc-----hh---HHHHHH--HHc-CCcccchhhhhccCHHHHHHHHHc---CCeEE
Confidence 67889999999999999999974311 01 122222 101 011113455554 45678888863 57889
Q ss_pred ccch
Q 019093 196 VTPQ 199 (346)
Q Consensus 196 t~ph 199 (346)
+||-
T Consensus 248 ~cP~ 251 (340)
T PRK09358 248 VCPT 251 (340)
T ss_pred ECCC
Confidence 9995
No 149
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=71.75 E-value=5 Score=37.48 Aligned_cols=48 Identities=27% Similarity=0.361 Sum_probs=31.9
Q ss_pred HHHHHHHcCCeeEEEE-eecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093 84 EIKLARKTGVVFAVKL-YPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV 139 (346)
Q Consensus 84 el~~l~~~G~v~~~Ki-f~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~ 139 (346)
.+..+.+.| |.|+|+ ||.. .+... . ...+++++.++++++.|-+|-..
T Consensus 111 ~f~~~~~~G-v~GvKidF~~~---d~Q~~---v-~~y~~i~~~AA~~~LmvnfHg~~ 159 (273)
T PF10566_consen 111 AFKLYAKWG-VKGVKIDFMDR---DDQEM---V-NWYEDILEDAAEYKLMVNFHGAT 159 (273)
T ss_dssp HHHHHHHCT-EEEEEEE--SS---TSHHH---H-HHHHHHHHHHHHTT-EEEETTS-
T ss_pred HHHHHHHcC-CCEEeeCcCCC---CCHHH---H-HHHHHHHHHHHHcCcEEEecCCc
Confidence 456677889 999999 6531 11111 1 45678999999999999999864
No 150
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=68.59 E-value=89 Score=30.04 Aligned_cols=72 Identities=17% Similarity=0.267 Sum_probs=41.1
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHH
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQP 160 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~ 160 (346)
..+.+..+.+.| +..+||= | .-+.+ +.+++++++.|+|+++-..-..+ .| +...+
T Consensus 98 d~~svd~l~~~~-v~~~KIa-----S---~~~~n-----~pLL~~~A~~gkPvilStGmatl------~E---i~~Av-- 152 (329)
T TIGR03569 98 DLESADFLEDLG-VPRFKIP-----S---GEITN-----APLLKKIARFGKPVILSTGMATL------EE---IEAAV-- 152 (329)
T ss_pred CHHHHHHHHhcC-CCEEEEC-----c---ccccC-----HHHHHHHHhcCCcEEEECCCCCH------HH---HHHHH--
Confidence 455666666667 7888972 1 11233 35677778888888876654322 22 23333
Q ss_pred HHHhCCCCc---EEEEccCC
Q 019093 161 LIQRLPQLK---VVMEHITT 177 (346)
Q Consensus 161 ~la~~~g~~---lhi~HvSt 177 (346)
...+..|++ +.++|+.+
T Consensus 153 ~~i~~~G~~~~~i~llhC~s 172 (329)
T TIGR03569 153 GVLRDAGTPDSNITLLHCTT 172 (329)
T ss_pred HHHHHcCCCcCcEEEEEECC
Confidence 222334554 77877654
No 151
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=68.57 E-value=24 Score=33.82 Aligned_cols=92 Identities=8% Similarity=-0.074 Sum_probs=43.7
Q ss_pred EEecCccccceecCCC-cccc--cccc-----------ccCCceeEEEeCC---CCCCCCCcHHHHHHHHHHHHhh---C
Q 019093 3 LTLTQPDDWHLHLRDG-DLLK--AVVP-----------HSVSHYGRAIVMP---NLKPPITTTAAAVAYRESILKA---L 62 (346)
Q Consensus 3 ~vlPG~ID~HvH~r~g-~~~k--e~~~-----------s~sGGvTtvv~mP---nt~p~~~~~~~~~~~~~~~~~~---~ 62 (346)
++|||+||+|+--=|. ...+ =.|. =.+-|+|||+|-- ....+-...+.+....+.+... .
T Consensus 46 ~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aAi~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g 125 (377)
T COG3454 46 YLLPGLIELHTDNLERFMTPRPGVRWPPIAAILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAG 125 (377)
T ss_pred eecccchhhcchhhhcccCCCCCCCCCchHHHHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhcc
Confidence 7899999999843221 1111 1121 1247999998842 2222222233444444433331 1
Q ss_pred CCCccEEEEEEEEeCCCCCHHHHHHHHHcCCe
Q 019093 63 PASSNFTPLMTLYLTDTTSPDEIKLARKTGVV 94 (346)
Q Consensus 63 ~~~vd~~~~~~~~~~~~~~~~el~~l~~~G~v 94 (346)
....|-.+|.-.-+......+.++++...+.+
T Consensus 126 ~lradHr~HlRcEvs~~~~l~~~e~~~~~p~v 157 (377)
T COG3454 126 RLRADHRLHLRCEVSHPATLPLFEDLMDHPRV 157 (377)
T ss_pred chhhccceeeeeecCChhHHHHHHHHhcCCCe
Confidence 11245444443311222234556777766644
No 152
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=68.00 E-value=62 Score=31.05 Aligned_cols=18 Identities=17% Similarity=0.111 Sum_probs=11.4
Q ss_pred CHHHHHHHHHcCCeeEEEE
Q 019093 81 SPDEIKLARKTGVVFAVKL 99 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Ki 99 (346)
.......|.+.+ +..|||
T Consensus 112 d~~svd~l~~~~-~~ayKI 129 (347)
T COG2089 112 DLTAVDLLESLN-PPAYKI 129 (347)
T ss_pred CHHHHHHHHhcC-CCeEEe
Confidence 344455555567 788997
No 153
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=67.62 E-value=25 Score=33.41 Aligned_cols=133 Identities=11% Similarity=0.067 Sum_probs=69.7
Q ss_pred hCCCCcEEEEccCCHHHHHHHHccCCCeeEEE-----ccchhhccchhhhccCC-CCCceE--EeCCC-C--ChhhHHHH
Q 019093 164 RLPQLKVVMEHITTMDAVKFVESCKEGFVAAT-----VTPQHLVLNRNALFQGG-LRPHNY--CLPVL-K--REIHRQAV 232 (346)
Q Consensus 164 ~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~E-----t~ph~L~l~~~~~~~~~-~~~~~k--~~PPL-R--~~~d~~aL 232 (346)
...|.=+=+.|+|.+...+.++.++.--|..- +|+|.=-++++.+.... .|...- ..|+. + ...+.+.+
T Consensus 164 n~lGmiiDvSH~s~~~~~dv~~~s~~PviaSHsn~ral~~h~RNltD~~i~~ia~~GGvigi~~~~~fl~~~~~~~~~~~ 243 (309)
T cd01301 164 NRLGIIIDLSHLSERTFWDVLDISNAPVIASHSNARALCDHPRNLTDAQLKAIAETGGVIGVNFYPAFLSPGADATLDDV 243 (309)
T ss_pred HHcCCEEEcCCCCHHHHHHHHHhcCCCEEEeccChHHhcCCCCCCCHHHHHHHHHcCCEEEEeeeHHHhCCCCCCCHHHH
Confidence 34577788888888888888887652112222 35555457777764210 011111 11221 1 12344445
Q ss_pred HHHHHcCCccEEeecCCCCCCccccccCCCCCCccchhHHHHHHHHHHHhcC-CHHHHHHHHchhhhh
Q 019093 233 VSAVTSGSRKFFLGTDSAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMG-ALDKLEAFTSFNGPD 299 (346)
Q Consensus 233 ~~al~~G~Id~~i~SDHaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~-~l~~lv~~~s~nPAk 299 (346)
.+.+.- .++. +|.||.....+--.....+.|+.+.. .+|.+...+.++| +-+++.+++..|+-|
T Consensus 244 ~~hi~~-i~~l-~G~dhVgiGsDfdg~~~~~~gl~~~~-~~~~l~~~L~~rG~s~~~i~~i~g~N~lR 308 (309)
T cd01301 244 VRHIDY-IVDL-IGIDHVGLGSDFDGIGGTPGGLEDVS-DLPNLTAELLERGYSEEEIEKIAGGNFLR 308 (309)
T ss_pred HHHHHH-HHHh-cCCCeEEECcccCCCCCCccccCCHH-HHHHHHHHHHHcCCCHHHHHHHHhhchhc
Confidence 555432 2334 44555444211100000123555553 5777777777776 788899999999765
No 154
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=64.35 E-value=1.2e+02 Score=28.00 Aligned_cols=102 Identities=11% Similarity=0.010 Sum_probs=53.3
Q ss_pred EEEEEEEEeCCCCCHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCc---EEEecCCC-CCC
Q 019093 68 FTPLMTLYLTDTTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMP---LLVHGEVT-DPI 143 (346)
Q Consensus 68 ~~~~~~~~~~~~~~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~---v~vHaE~~-~~~ 143 (346)
++.|+++ ..+ -.+.+.++.+.| ..+|-+|+..........+ +. ....+.-+..++.+.. +.+|+-=. .+.
T Consensus 3 ~g~h~s~--~g~-~~~a~~~~~~~G-~~~~qif~~~P~~w~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~~Hapy~iNla 76 (274)
T TIGR00587 3 LGAHVSA--AGG-LQAAYNRAAEIG-ATAFMFFLKSPRWWRRPML-EE-EVIDWFKAALETNKNLSQIVLVHAPYLINLA 76 (274)
T ss_pred eEEEEec--cCC-HHHHHHHHHHhC-CCEEEEEecCccccCCCCC-CH-HHHHHHHHHHHHcCCCCcceeccCCeeeecC
Confidence 3456554 332 344567777778 6899999743111111112 21 2333333445555554 67886532 111
Q ss_pred C-C--hhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC
Q 019093 144 V-D--IFDREKVFIDTILQPLIQRLPQLKVVMEHITT 177 (346)
Q Consensus 144 ~-~--~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt 177 (346)
+ + +...-...+.+.+ .+|+..|++..+.|..+
T Consensus 77 s~~~~~r~~sv~~~~~~i--~~A~~lga~~vv~H~G~ 111 (274)
T TIGR00587 77 SPDEEKEEKSLDVLDEEL--KRCELLGIMLYNFHPGS 111 (274)
T ss_pred CCCHHHHHHHHHHHHHHH--HHHHHcCCCEEEECCCC
Confidence 1 1 1112223445556 57888999999999864
No 155
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=60.84 E-value=25 Score=31.29 Aligned_cols=72 Identities=21% Similarity=0.328 Sum_probs=37.0
Q ss_pred HHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh
Q 019093 85 IKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR 164 (346)
Q Consensus 85 l~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~ 164 (346)
+.-|.+.| +.|+|.|+-. +.... +++..+-+.+++.|..+ .+--. + +... +..++ ..+.
T Consensus 141 iaml~dmG-~~SiKffPm~-------Gl~~l-eE~~avAkA~a~~g~~l--EPTGG-I--dl~N-----~~~I~--~i~l 199 (218)
T PF07071_consen 141 IAMLKDMG-GSSIKFFPMG-------GLKHL-EELKAVAKACARNGFTL--EPTGG-I--DLDN-----FEEIV--KICL 199 (218)
T ss_dssp HHHHHHTT---EEEE---T-------TTTTH-HHHHHHHHHHHHCT-EE--EEBSS-----TTT-----HHHHH--HHHH
T ss_pred HHHHHHcC-CCeeeEeecC-------CcccH-HHHHHHHHHHHHcCcee--CCcCC-c--CHHH-----HHHHH--HHHH
Confidence 44556678 7999999732 23344 78888889999999886 22211 1 1111 22344 4666
Q ss_pred CCCCcEEEEccCC
Q 019093 165 LPQLKVVMEHITT 177 (346)
Q Consensus 165 ~~g~~lhi~HvSt 177 (346)
..|++..|-||-|
T Consensus 200 ~aGv~~viPHiYs 212 (218)
T PF07071_consen 200 DAGVEKVIPHIYS 212 (218)
T ss_dssp HTT-S-B--EE-G
T ss_pred HcCCCeeccchhh
Confidence 7799999999865
No 156
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=58.22 E-value=45 Score=30.05 Aligned_cols=72 Identities=22% Similarity=0.322 Sum_probs=46.4
Q ss_pred HHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHh
Q 019093 85 IKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQR 164 (346)
Q Consensus 85 l~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~ 164 (346)
+.-|.+.| ..|+|.|+-. +.... ++++.+-+.|++.|..+ | +. .++... -+..++ ..+.
T Consensus 141 iaml~dmG-~~SiKffPM~-------Gl~~l-eE~~avA~aca~~g~~l----E-PT--GGIdl~---Nf~~I~--~i~l 199 (236)
T TIGR03581 141 IAMLKDMG-GSSVKFFPMG-------GLKHL-EEYAAVAKACAKHGFYL----E-PT--GGIDLD---NFEEIV--QIAL 199 (236)
T ss_pred HHHHHHcC-CCeeeEeecC-------CcccH-HHHHHHHHHHHHcCCcc----C-CC--CCccHH---hHHHHH--HHHH
Confidence 44556678 7999999732 23334 78888899999999873 3 11 122111 122344 5667
Q ss_pred CCCCcEEEEccCC
Q 019093 165 LPQLKVVMEHITT 177 (346)
Q Consensus 165 ~~g~~lhi~HvSt 177 (346)
..|++-.|-||-+
T Consensus 200 daGv~kviPHIYs 212 (236)
T TIGR03581 200 DAGVEKVIPHVYS 212 (236)
T ss_pred HcCCCeeccccce
Confidence 7899999999865
No 157
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=58.22 E-value=56 Score=30.43 Aligned_cols=10 Identities=30% Similarity=0.424 Sum_probs=4.6
Q ss_pred CCccEEeecC
Q 019093 239 GSRKFFLGTD 248 (346)
Q Consensus 239 G~Id~~i~SD 248 (346)
+.+.++.|+|
T Consensus 179 ~~~~v~~G~d 188 (289)
T PF00701_consen 179 PDFSVFCGDD 188 (289)
T ss_dssp TTSEEEESSG
T ss_pred cCeeeecccc
Confidence 4555533333
No 158
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=56.90 E-value=4.9 Score=39.46 Aligned_cols=15 Identities=27% Similarity=0.337 Sum_probs=13.6
Q ss_pred eEEecCccccceecC
Q 019093 2 ELTLTQPDDWHLHLR 16 (346)
Q Consensus 2 ~~vlPG~ID~HvH~r 16 (346)
++||||++|.|.|..
T Consensus 52 klvm~GGvD~HsHvA 66 (575)
T COG1229 52 KLVMPGGVDSHSHVA 66 (575)
T ss_pred cEEecCccccccccc
Confidence 589999999999984
No 159
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=56.03 E-value=74 Score=29.89 Aligned_cols=30 Identities=10% Similarity=0.092 Sum_probs=14.7
Q ss_pred CHHHHHHHHccC--CCeeEEEccchhhccchh
Q 019093 177 TMDAVKFVESCK--EGFVAATVTPQHLVLNRN 206 (346)
Q Consensus 177 t~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~ 206 (346)
+.+++++++.|+ |.+.-.=+.|+|.-.+++
T Consensus 81 t~~ai~~a~~A~~~Gad~v~v~pP~y~~~~~~ 112 (294)
T TIGR02313 81 HDETLELTKFAEEAGADAAMVIVPYYNKPNQE 112 (294)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCccCCCCCHH
Confidence 455555555554 444333345555544443
No 160
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=55.89 E-value=1.8e+02 Score=27.30 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=34.7
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCH
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTM 178 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~ 178 (346)
..+.+.+++++++|..+-++--..++ ...+. .+.+.+++++.+-|...+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~ql------------~~~i~-l~~~~Pd~~~VldH~G~p 172 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQL------------PDLIP-LALKAPDVNFVLDHCGRP 172 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhhh------------HHHHH-HHhhCCCCCEEeccCCCC
Confidence 47889999999999987554443332 12221 456778899999999875
No 161
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=55.63 E-value=1.7e+02 Score=26.84 Aligned_cols=16 Identities=6% Similarity=-0.085 Sum_probs=9.0
Q ss_pred HHHhCCCCcEEEEccC
Q 019093 161 LIQRLPQLKVVMEHIT 176 (346)
Q Consensus 161 ~la~~~g~~lhi~HvS 176 (346)
.+|+..|++..+.|..
T Consensus 92 ~~A~~lG~~~v~~~~g 107 (279)
T cd00019 92 ERCEELGIRLLVFHPG 107 (279)
T ss_pred HHHHHcCCCEEEECCC
Confidence 4555556665555554
No 162
>PTZ00124 adenosine deaminase; Provisional
Probab=55.55 E-value=2.1e+02 Score=27.91 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=41.2
Q ss_pred HHHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEEE
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAAT 195 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~E 195 (346)
..+.++|+++++.|+.+.+||......... .....++.. .-++..| |=+++. .++-++.+++ .+|..|
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~-~~v~~ai~~----l~~~RIG---HG~~~~~d~~l~~~l~~---~~I~lE 274 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNL-NTLYSAIQV----LKVKRIG---HGIRVAESQELIDMVKE---KDILLE 274 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcc-hhHHHHHHH----hCCCccc---cccccCCCHHHHHHHHH---cCCeEE
Confidence 456789999999999999999753110000 111112211 1233333 233332 5777777776 468899
Q ss_pred ccc
Q 019093 196 VTP 198 (346)
Q Consensus 196 t~p 198 (346)
+||
T Consensus 275 vCP 277 (362)
T PTZ00124 275 VCP 277 (362)
T ss_pred ECC
Confidence 999
No 163
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=53.15 E-value=1e+02 Score=28.93 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=21.0
Q ss_pred ccCCHHHHHHHHccC--CCeeEEEccchhhccchhhh
Q 019093 174 HITTMDAVKFVESCK--EGFVAATVTPQHLVLNRNAL 208 (346)
Q Consensus 174 HvSt~~~l~~i~~ak--g~~vt~Et~ph~L~l~~~~~ 208 (346)
+.|+.+++++++.++ |.+.-.=+.|+|.-.+++.+
T Consensus 79 ~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~~~~i 115 (290)
T TIGR00683 79 SVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEI 115 (290)
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCCHHHH
Confidence 445677777777766 54332336677776665543
No 164
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=51.50 E-value=1.2e+02 Score=28.43 Aligned_cols=9 Identities=22% Similarity=0.508 Sum_probs=5.7
Q ss_pred CCcEEEecC
Q 019093 130 NMPLLVHGE 138 (346)
Q Consensus 130 g~~v~vHaE 138 (346)
+.+|+++..
T Consensus 69 ~~pvi~gv~ 77 (289)
T cd00951 69 RVPVLAGAG 77 (289)
T ss_pred CCCEEEecC
Confidence 466776665
No 165
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=50.80 E-value=1.1e+02 Score=28.63 Aligned_cols=11 Identities=18% Similarity=-0.152 Sum_probs=5.4
Q ss_pred ccchhHHHHHH
Q 019093 266 IYNAPVALSLY 276 (346)
Q Consensus 266 ~~g~e~~lp~l 276 (346)
++|+-..+|-+
T Consensus 203 is~~~n~~P~~ 213 (292)
T PRK03170 203 ISVAANVAPKE 213 (292)
T ss_pred EEhHHhhhHHH
Confidence 34455556643
No 166
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=50.59 E-value=2.4e+02 Score=27.19 Aligned_cols=74 Identities=15% Similarity=0.052 Sum_probs=43.0
Q ss_pred HHHHHHHHHhHHcC--CcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQN--MPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g--~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~akg~~vt~ 194 (346)
..+.++|+++++.| +++.+||....- .+.... ..|...+. .-++..|-=+++. ..++-++.+++ .+|..
T Consensus 179 ~~f~~~f~~ar~~g~~l~~t~HAGE~~~-~~~~~~--~~v~~al~-lg~~RIGHG~~~~--~dp~ll~~l~~---~~I~l 249 (345)
T cd01321 179 LDFLPQLLWFPKQCAEIPFFFHAGETNG-DGTETD--ENLVDALL-LNTKRIGHGFALP--KHPLLMDLVKK---KNIAI 249 (345)
T ss_pred HHHHHHHHHHHHhCCCCceEeecCCCcC-CCCCCh--hHHHHHHH-hCCCcCccccccC--cCHHHHHHHHH---cCCeE
Confidence 56778999999999 999999974321 000001 12323331 1233333322222 25777777775 46889
Q ss_pred Eccch
Q 019093 195 TVTPQ 199 (346)
Q Consensus 195 Et~ph 199 (346)
|+||-
T Consensus 250 EvCPt 254 (345)
T cd01321 250 EVCPI 254 (345)
T ss_pred EECcc
Confidence 99993
No 167
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=49.98 E-value=92 Score=28.97 Aligned_cols=10 Identities=10% Similarity=-0.137 Sum_probs=5.0
Q ss_pred ccchhHHHHH
Q 019093 266 IYNAPVALSL 275 (346)
Q Consensus 266 ~~g~e~~lp~ 275 (346)
++|+-..+|-
T Consensus 200 i~~~~~~~P~ 209 (285)
T TIGR00674 200 ISVTANVAPK 209 (285)
T ss_pred EehHHHhhHH
Confidence 3455555554
No 168
>TIGR03586 PseI pseudaminic acid synthase.
Probab=49.17 E-value=2.5e+02 Score=26.98 Aligned_cols=45 Identities=13% Similarity=0.265 Sum_probs=27.2
Q ss_pred CHHHHHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHcCCcEEEecCC
Q 019093 81 SPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEV 139 (346)
Q Consensus 81 ~~~el~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~g~~v~vHaE~ 139 (346)
..+.+..+.+.| +..|||= | .-+.+ +.+++++++.|+||++-..-
T Consensus 99 d~~svd~l~~~~-v~~~KI~-----S---~~~~n-----~~LL~~va~~gkPvilstG~ 143 (327)
T TIGR03586 99 DETAVDFLESLD-VPAYKIA-----S---FEITD-----LPLIRYVAKTGKPIIMSTGI 143 (327)
T ss_pred CHHHHHHHHHcC-CCEEEEC-----C---ccccC-----HHHHHHHHhcCCcEEEECCC
Confidence 455666666667 7888972 1 11223 35666677777777765554
No 169
>PLN02417 dihydrodipicolinate synthase
Probab=49.08 E-value=1.1e+02 Score=28.44 Aligned_cols=10 Identities=10% Similarity=-0.154 Sum_probs=5.1
Q ss_pred ccchhHHHHH
Q 019093 266 IYNAPVALSL 275 (346)
Q Consensus 266 ~~g~e~~lp~ 275 (346)
++++-..+|-
T Consensus 198 is~~~n~~P~ 207 (280)
T PLN02417 198 ISVTSNLVPG 207 (280)
T ss_pred EecHHHhhHH
Confidence 4444555664
No 170
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=46.74 E-value=1.2e+02 Score=28.05 Aligned_cols=9 Identities=11% Similarity=0.316 Sum_probs=4.6
Q ss_pred CcEEEecCC
Q 019093 131 MPLLVHGEV 139 (346)
Q Consensus 131 ~~v~vHaE~ 139 (346)
.+++++...
T Consensus 67 ~~vi~gv~~ 75 (281)
T cd00408 67 VPVIAGVGA 75 (281)
T ss_pred CeEEEecCC
Confidence 455555544
No 171
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.94 E-value=1.2e+02 Score=28.77 Aligned_cols=11 Identities=18% Similarity=0.298 Sum_probs=5.4
Q ss_pred CCccEEeecCC
Q 019093 239 GSRKFFLGTDS 249 (346)
Q Consensus 239 G~Id~~i~SDH 249 (346)
+.+.+|.++|+
T Consensus 186 ~~~~v~~g~d~ 196 (309)
T cd00952 186 GRMRLLPLEDD 196 (309)
T ss_pred CCeEEeecchh
Confidence 35565334554
No 172
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=44.22 E-value=1.5e+02 Score=27.58 Aligned_cols=8 Identities=25% Similarity=0.439 Sum_probs=3.5
Q ss_pred CcEEEecC
Q 019093 131 MPLLVHGE 138 (346)
Q Consensus 131 ~~v~vHaE 138 (346)
.++++++.
T Consensus 71 ~~viagv~ 78 (288)
T cd00954 71 VTLIAHVG 78 (288)
T ss_pred CeEEeccC
Confidence 34444443
No 173
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=41.37 E-value=1.7e+02 Score=27.33 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=11.4
Q ss_pred CHHHHHHHHccC--CCeeEEEccchhhccc
Q 019093 177 TMDAVKFVESCK--EGFVAATVTPQHLVLN 204 (346)
Q Consensus 177 t~~~l~~i~~ak--g~~vt~Et~ph~L~l~ 204 (346)
+.+++++++.++ |.+.-.=+.|+|.-.+
T Consensus 85 t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~ 114 (293)
T PRK04147 85 TAEAQELAKYATELGYDAISAVTPFYYPFS 114 (293)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcCCCCC
Confidence 344444444443 3332223344444433
No 174
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=40.48 E-value=2e+02 Score=26.87 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=22.0
Q ss_pred HHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHH---cCCcEEEecC
Q 019093 86 KLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVE---QNMPLLVHGE 138 (346)
Q Consensus 86 ~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~---~g~~v~vHaE 138 (346)
..+.+.| |.|+ |..+. +.....+++ ++-.++++.+.+ -..+|++|..
T Consensus 33 ~~l~~~G-v~gi--~v~Gs-tGE~~~Lt~--eEr~~v~~~~~~~~~g~~pvi~gv~ 82 (296)
T TIGR03249 33 EWLLGYG-LEAL--FAAGG-TGEFFSLTP--AEYEQVVEIAVSTAKGKVPVYTGVG 82 (296)
T ss_pred HHHHhcC-CCEE--EECCC-CcCcccCCH--HHHHHHHHHHHHHhCCCCcEEEecC
Confidence 3445567 6775 44331 112223333 344444444333 2467777765
No 175
>COG1312 UxuA D-mannonate dehydratase [Carbohydrate transport and metabolism]
Probab=38.53 E-value=1.6e+02 Score=28.47 Aligned_cols=23 Identities=13% Similarity=0.099 Sum_probs=17.2
Q ss_pred HHHHHHhHHcCCcEEEecCCCCC
Q 019093 120 VHVLEEMVEQNMPLLVHGEVTDP 142 (346)
Q Consensus 120 ~~~l~~~~~~g~~v~vHaE~~~~ 142 (346)
.++.=-|.+.|+.+++|+.|+-.
T Consensus 195 ~~ViPVAEe~gVkmaiHPDDPP~ 217 (362)
T COG1312 195 KEVIPVAEEVGVKMAIHPDDPPW 217 (362)
T ss_pred HhhcchHHhcCceEEeCCCCCCc
Confidence 34444467889999999999874
No 176
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=37.92 E-value=3.5e+02 Score=25.39 Aligned_cols=68 Identities=15% Similarity=0.033 Sum_probs=43.5
Q ss_pred HHHHHHHHHhHHcC-CcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccCCCeeEE
Q 019093 117 GKCVHVLEEMVEQN-MPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 117 ~~l~~~l~~~~~~g-~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~akg~~vt~ 194 (346)
..+..+|+++++.| .++.+||..... . ..+...+. .++... -|-.+++ .++-++++++ .++..
T Consensus 153 ~~f~~~~~~ar~~g~l~~t~HaGE~~~------~--~~v~~~~~-~~~~RI---gHg~~~~~~p~~~~~l~~---~~i~i 217 (305)
T cd00443 153 RDFYSYYEYARRLGLLGLTLHCGETGN------R--EELLQALL-LLPDRI---GHGIFLLKHPELIYLVKL---RNIPI 217 (305)
T ss_pred HHHHHHHHHHHHcCCcceEEeecCCCC------h--HHHHHHHH-hcccee---eceEecCCCHHHHHHHHH---cCCEE
Confidence 57889999999999 999999986421 1 12333331 122222 2444444 4577787776 46889
Q ss_pred Eccch
Q 019093 195 TVTPQ 199 (346)
Q Consensus 195 Et~ph 199 (346)
|+||-
T Consensus 218 e~CP~ 222 (305)
T cd00443 218 EVCPT 222 (305)
T ss_pred EECcc
Confidence 99993
No 177
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=37.79 E-value=1.6e+02 Score=27.67 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=14.4
Q ss_pred hhhHHHHHHHHHcCCccE---EeecCCCCCC
Q 019093 226 EIHRQAVVSAVTSGSRKF---FLGTDSAPHE 253 (346)
Q Consensus 226 ~~d~~aL~~al~~G~Id~---~i~SDHaP~~ 253 (346)
+++-....+.. | +|+ -|||=|-.+.
T Consensus 157 peea~~Fv~~T--g-vD~LAvaiGt~HG~Y~ 184 (286)
T PRK12738 157 PQEAKRFVELT--G-VDSLAVAIGTAHGLYS 184 (286)
T ss_pred HHHHHHHHHHh--C-CCEEEeccCcccCCCC
Confidence 36655565544 3 565 2467787774
No 178
>KOG0333 consensus U5 snRNP-like RNA helicase subunit [RNA processing and modification]
Probab=36.22 E-value=1e+02 Score=31.70 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC---CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCC
Q 019093 149 REKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK---EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKR 225 (346)
Q Consensus 149 ~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak---g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~ 225 (346)
.|.+...++++ .+... +-|-.|.-+.++++++.|..-- |.++ ++-| +| ++
T Consensus 500 ~ed~k~kkL~e-il~~~-~~ppiIIFvN~kk~~d~lAk~LeK~g~~~---~tlH-----------g~-----------k~ 552 (673)
T KOG0333|consen 500 SEDEKRKKLIE-ILESN-FDPPIIIFVNTKKGADALAKILEKAGYKV---TTLH-----------GG-----------KS 552 (673)
T ss_pred cchHHHHHHHH-HHHhC-CCCCEEEEEechhhHHHHHHHHhhccceE---EEee-----------CC-----------cc
Confidence 45555666663 34444 4555677888999999887531 2222 1222 11 35
Q ss_pred hhhHHHHHHHHHcCCccEEeecCCCCCCcccc
Q 019093 226 EIHRQAVVSAVTSGSRKFFLGTDSAPHERGRK 257 (346)
Q Consensus 226 ~~d~~aL~~al~~G~Id~~i~SDHaP~~~~~K 257 (346)
.+.|+..+++++.|+.|++|+||-|....+-+
T Consensus 553 qeQRe~aL~~fr~~t~dIlVaTDvAgRGIDIp 584 (673)
T KOG0333|consen 553 QEQRENALADFREGTGDILVATDVAGRGIDIP 584 (673)
T ss_pred HHHHHHHHHHHHhcCCCEEEEecccccCCCCC
Confidence 78999999999999999999999988765543
No 179
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=35.98 E-value=2.6e+02 Score=26.22 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=20.8
Q ss_pred HHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHH---cCCcEEEecC
Q 019093 86 KLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVE---QNMPLLVHGE 138 (346)
Q Consensus 86 ~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~---~g~~v~vHaE 138 (346)
..+.+.| |.|+ |..+. +.....++. ++-.++++.+.+ -+.+|+++..
T Consensus 35 ~~l~~~G-v~Gi--~~~Gs-tGE~~~Lt~--eEr~~~~~~~~~~~~~~~pvi~gv~ 84 (303)
T PRK03620 35 EWLAPYG-AAAL--FAAGG-TGEFFSLTP--DEYSQVVRAAVETTAGRVPVIAGAG 84 (303)
T ss_pred HHHHHcC-CCEE--EECcC-CcCcccCCH--HHHHHHHHHHHHHhCCCCcEEEecC
Confidence 3344566 6665 34331 111222333 334444443332 2467777765
No 180
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=35.72 E-value=2.3e+02 Score=26.15 Aligned_cols=50 Identities=20% Similarity=0.335 Sum_probs=22.5
Q ss_pred HHHHHHcCCeeEEEEeecCCccCCCCCccChHHHHHHHHHHhHHc---CCcEEEecCCC
Q 019093 85 IKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQ---NMPLLVHGEVT 140 (346)
Q Consensus 85 l~~l~~~G~v~~~Kif~~~~~~~~~~~~~d~~~~l~~~l~~~~~~---g~~v~vHaE~~ 140 (346)
+..+.+.| +.|+ |..+. +.....+++ ++-.++++.+.+. +.+++++....
T Consensus 27 i~~l~~~G-v~gl--~v~Gs-tGE~~~lt~--~Er~~l~~~~~~~~~~~~~vi~gv~~~ 79 (284)
T cd00950 27 IEFQIENG-TDGL--VVCGT-TGESPTLSD--EEHEAVIEAVVEAVNGRVPVIAGTGSN 79 (284)
T ss_pred HHHHHHcC-CCEE--EECCC-CcchhhCCH--HHHHHHHHHHHHHhCCCCcEEeccCCc
Confidence 34445566 6664 33221 112223333 3444455444433 35666666654
No 181
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=33.32 E-value=3.1e+02 Score=25.43 Aligned_cols=27 Identities=11% Similarity=0.266 Sum_probs=14.9
Q ss_pred CCHHHHHHHHccC--CCeeEEEccchhhc
Q 019093 176 TTMDAVKFVESCK--EGFVAATVTPQHLV 202 (346)
Q Consensus 176 St~~~l~~i~~ak--g~~vt~Et~ph~L~ 202 (346)
|+.+++++++.++ |.+.-.=+.|+|..
T Consensus 76 ~~~~ai~~a~~a~~~Gad~v~v~~P~y~~ 104 (279)
T cd00953 76 NLEESIELARAAKSFGIYAIASLPPYYFP 104 (279)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCcCCC
Confidence 3566666666665 54433334565543
No 182
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=30.05 E-value=2.1e+02 Score=27.01 Aligned_cols=22 Identities=18% Similarity=0.302 Sum_probs=12.9
Q ss_pred HHHHHHHHHhHHcCCcEEEecC
Q 019093 117 GKCVHVLEEMVEQNMPLLVHGE 138 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~v~vHaE 138 (346)
+.+..+|+.+++.+.|+++-.-
T Consensus 29 E~~~AileaA~e~~sPvIiq~S 50 (286)
T COG0191 29 ETLQAILEAAEEEKSPVIIQFS 50 (286)
T ss_pred HHHHHHHHHHHHhCCCEEEEec
Confidence 5566666666666666655443
No 183
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=29.77 E-value=4.7e+02 Score=24.49 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=37.0
Q ss_pred HHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCc--EEEEccC-CHHHHHHHHccCCCeeEE
Q 019093 118 KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLK--VVMEHIT-TMDAVKFVESCKEGFVAA 194 (346)
Q Consensus 118 ~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~--lhi~HvS-t~~~l~~i~~akg~~vt~ 194 (346)
....+++.+++.|..+.+||....- .. .+...+ .+ .|.. -|-+++. .++-++.+++ .+|.+
T Consensus 181 ~~~~~~~~a~~~gl~~t~HaGE~~~----~~----~~~~ai--~~---l~~~RIgHG~~~~~~p~l~~~~~~---~~I~i 244 (331)
T PF00962_consen 181 KFAPAFRKAREAGLKLTVHAGETGG----PE----HIRDAI--LL---LGADRIGHGVRLIKDPELLELLAE---RQIPI 244 (331)
T ss_dssp GHHHHHHHHHHTT-EEEEEESSSST----HH----HHHHHH--HT---ST-SEEEE-GGGGGSHHHHHHHHH---TT-EE
T ss_pred HHHHHHhhhcccceeecceecccCC----cc----cccchh--hh---ccceeecchhhhhhhhHHHHHHHH---hCCCe
Confidence 4678999999999999999975431 11 122222 11 2322 2333333 4666677765 46899
Q ss_pred Eccch
Q 019093 195 TVTPQ 199 (346)
Q Consensus 195 Et~ph 199 (346)
|+||-
T Consensus 245 Evcpt 249 (331)
T PF00962_consen 245 EVCPT 249 (331)
T ss_dssp EE-HH
T ss_pred eeCCC
Confidence 99993
No 184
>COG1197 Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
Probab=29.61 E-value=47 Score=37.06 Aligned_cols=93 Identities=15% Similarity=0.251 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhCCCCcEEEEccC-CHHHHHHHHccC----CCeeEEEccchhhccchhhhcc-----CCCCCceEEeCC
Q 019093 153 FIDTILQPLIQRLPQLKVVMEHIT-TMDAVKFVESCK----EGFVAATVTPQHLVLNRNALFQ-----GGLRPHNYCLPV 222 (346)
Q Consensus 153 av~~~l~~~la~~~g~~lhi~HvS-t~~~l~~i~~ak----g~~vt~Et~ph~L~l~~~~~~~-----~~~~~~~k~~PP 222 (346)
||..+.++..+..+-=|+.+--|. -+..+.+=..+| |.+|.+ .+|--| |.+++|+. .+|.-...+---
T Consensus 602 AI~eVk~DM~~~kpMDRLiCGDVGFGKTEVAmRAAFkAV~~GKQVAv-LVPTTl-LA~QHy~tFkeRF~~fPV~I~~LSR 679 (1139)
T COG1197 602 AIEEVKRDMESGKPMDRLICGDVGFGKTEVAMRAAFKAVMDGKQVAV-LVPTTL-LAQQHYETFKERFAGFPVRIEVLSR 679 (1139)
T ss_pred HHHHHHHHhccCCcchheeecCcCCcHHHHHHHHHHHHhcCCCeEEE-EcccHH-hHHHHHHHHHHHhcCCCeeEEEecc
Confidence 344444333344444466666676 344444322233 444422 233222 33444431 134344555556
Q ss_pred CCChhhHHHHHHHHHcCCccEEeec
Q 019093 223 LKREIHRQAVVSAVTSGSRKFFLGT 247 (346)
Q Consensus 223 LR~~~d~~aL~~al~~G~Id~~i~S 247 (346)
+|+..++.+..++|++|.||++|||
T Consensus 680 F~s~kE~~~il~~la~G~vDIvIGT 704 (1139)
T COG1197 680 FRSAKEQKEILKGLAEGKVDIVIGT 704 (1139)
T ss_pred cCCHHHHHHHHHHHhcCCccEEEec
Confidence 8899999999999999999997775
No 185
>PRK06361 hypothetical protein; Provisional
Probab=29.18 E-value=1.9e+02 Score=25.41 Aligned_cols=19 Identities=16% Similarity=-0.052 Sum_probs=17.2
Q ss_pred CHHHHHHHHchhhhhhcCC
Q 019093 285 ALDKLEAFTSFNGPDFYGL 303 (346)
Q Consensus 285 ~l~~lv~~~s~nPAki~gl 303 (346)
+.+++.+.+++||++++++
T Consensus 192 ~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 192 TEKELEEALENNPKLLLKR 210 (212)
T ss_pred CHHHHHHHHHHhHHHHHHh
Confidence 7899999999999999864
No 186
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=28.17 E-value=1.3e+02 Score=29.82 Aligned_cols=25 Identities=12% Similarity=0.099 Sum_probs=21.1
Q ss_pred HHHHHHHHhHHcCCcEEEecCCCCC
Q 019093 118 KCVHVLEEMVEQNMPLLVHGEVTDP 142 (346)
Q Consensus 118 ~l~~~l~~~~~~g~~v~vHaE~~~~ 142 (346)
-|.+++-.|.+.|+.+++|+-|+-.
T Consensus 215 FL~~ViPvAEe~GV~LAiHPDDPP~ 239 (394)
T TIGR00695 215 FLQEILPVAEEYGVQMAIHPDDPPR 239 (394)
T ss_pred HHHHHHHHHHHcCCEEEECCCCCCc
Confidence 4667888889999999999999853
No 187
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=26.92 E-value=2.4e+02 Score=22.32 Aligned_cols=54 Identities=19% Similarity=0.270 Sum_probs=32.1
Q ss_pred HHHHHHHHhHHcCCcEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC
Q 019093 118 KCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK 188 (346)
Q Consensus 118 ~l~~~l~~~~~~g~~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak 188 (346)
.+.+.++.....|.+|.|||.+..- -+-+..+ . .+... .+++-.++++.+++.|
T Consensus 69 ~~~~~i~~~~~~~~~vlVHC~~G~~-----Rs~~~~~---~--~l~~~-------~~~~~~~a~~~vr~~r 122 (139)
T cd00127 69 EAVDFIDDAREKGGKVLVHCLAGVS-----RSATLVI---A--YLMKT-------LGLSLREAYEFVKSRR 122 (139)
T ss_pred HHHHHHHHHHhcCCcEEEECCCCCc-----hhHHHHH---H--HHHHH-------cCCCHHHHHHHHHHHC
Confidence 3445566666678999999998642 0111111 1 12221 1567789999999876
No 188
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=26.70 E-value=3.3e+02 Score=26.24 Aligned_cols=102 Identities=18% Similarity=0.166 Sum_probs=49.7
Q ss_pred HHHHHHHHHhHHcCCc--EEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCC--HHHHHHHHccCCCee
Q 019093 117 GKCVHVLEEMVEQNMP--LLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITT--MDAVKFVESCKEGFV 192 (346)
Q Consensus 117 ~~l~~~l~~~~~~g~~--v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt--~~~l~~i~~akg~~v 192 (346)
+.++++++.+++.|.+ +..||-..-- ..-|..-+..+. .|++..++.+=+.-=|. ...+.+++ -|.
T Consensus 160 ~ei~~av~~~r~~g~~~i~LLhC~s~YP----ap~ed~NL~~i~--~l~~~Fn~~vGlSDHT~g~~a~l~AvA--LGA-- 229 (347)
T COG2089 160 EEIEEAVAILRENGNPDIALLHCTSAYP----APFEDVNLKAIP--KLAEAFNAIVGLSDHTLGILAPLAAVA--LGA-- 229 (347)
T ss_pred HHHHHHHHHHHhcCCCCeEEEEecCCCC----CCHHHhhHHHHH--HHHHHhCCccccccCccchhHHHHHHH--hcc--
Confidence 6677777777777766 6677765321 112222232333 34444455443322221 11122111 132
Q ss_pred EEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHHc
Q 019093 193 AATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVTS 238 (346)
Q Consensus 193 t~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~ 238 (346)
-+-=-|.+++.++ .|-+..+-++| ++-.+|.+++++
T Consensus 230 --~viEKHFtldk~~---~GpD~~fSldP-----~efk~mv~~ir~ 265 (347)
T COG2089 230 --SVIEKHFTLDKSR---EGPDHAFSLDP-----DEFKEMVDAIRQ 265 (347)
T ss_pred --cceeeeeeecCCC---CCCCcceecCH-----HHHHHHHHHHHH
Confidence 2233467777665 24467787887 454455555543
No 189
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=26.11 E-value=2.2e+02 Score=26.69 Aligned_cols=22 Identities=27% Similarity=0.321 Sum_probs=11.7
Q ss_pred HHHHHH-HhHHcCCcEEEecCCC
Q 019093 119 CVHVLE-EMVEQNMPLLVHGEVT 140 (346)
Q Consensus 119 l~~~l~-~~~~~g~~v~vHaE~~ 140 (346)
+..++. .+++...||++|-...
T Consensus 60 ~~~~~~~~a~~~~VPValHLDHg 82 (282)
T TIGR01858 60 IVALCSAASTTYNMPLALHLDHH 82 (282)
T ss_pred HHHHHHHHHHHCCCCEEEECCCC
Confidence 444443 3344567777776543
No 190
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=24.16 E-value=2.4e+02 Score=26.53 Aligned_cols=25 Identities=20% Similarity=0.202 Sum_probs=13.8
Q ss_pred hhhHHHHHHHHHcCCccE---EeecCCCCCC
Q 019093 226 EIHRQAVVSAVTSGSRKF---FLGTDSAPHE 253 (346)
Q Consensus 226 ~~d~~aL~~al~~G~Id~---~i~SDHaP~~ 253 (346)
+++-....+.- | ||+ -|||=|-.+.
T Consensus 157 peea~~Fv~~T--g-vD~LAvaiGt~HG~y~ 184 (284)
T PRK09195 157 PAQAREFVEAT--G-IDSLAVAIGTAHGMYK 184 (284)
T ss_pred HHHHHHHHHHH--C-cCEEeeccCccccccC
Confidence 36655565543 2 454 2467776664
No 191
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=23.27 E-value=2.6e+02 Score=26.25 Aligned_cols=23 Identities=9% Similarity=0.153 Sum_probs=13.2
Q ss_pred HHHHHH-HHhHHcCCcEEEecCCC
Q 019093 118 KCVHVL-EEMVEQNMPLLVHGEVT 140 (346)
Q Consensus 118 ~l~~~l-~~~~~~g~~v~vHaE~~ 140 (346)
.+..++ ..+++...||++|-...
T Consensus 61 ~~~~~~~~~A~~~~VPValHLDH~ 84 (284)
T PRK12857 61 YISAMVRTAAEKASVPVALHLDHG 84 (284)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC
Confidence 344433 34455677888876654
No 192
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=22.51 E-value=97 Score=30.09 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=17.0
Q ss_pred HHHHHHHhHHcCCcEEEecCCCCC
Q 019093 119 CVHVLEEMVEQNMPLLVHGEVTDP 142 (346)
Q Consensus 119 l~~~l~~~~~~g~~v~vHaE~~~~ 142 (346)
|.+++=.|.+.|+.+++|+.|+-.
T Consensus 188 L~~v~PvAEe~gV~laiHPDDPP~ 211 (351)
T PF03786_consen 188 LEAVIPVAEEAGVKLAIHPDDPPW 211 (351)
T ss_dssp HHHHHHHHHHCT-EEEEE--SSSS
T ss_pred HHhhhHHHHHhCCEEEeCCCCCCC
Confidence 456666778999999999999875
No 193
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=21.95 E-value=5.1e+02 Score=24.87 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=58.4
Q ss_pred cChHHHHHHHHHHhHHcCC----cEEEecCCCCCCCChhhhHHHHHHHHHHHHHHhCCCCcEEEEccCCHHHHHHHHccC
Q 019093 113 TDLFGKCVHVLEEMVEQNM----PLLVHGEVTDPIVDIFDREKVFIDTILQPLIQRLPQLKVVMEHITTMDAVKFVESCK 188 (346)
Q Consensus 113 ~d~~~~l~~~l~~~~~~g~----~v~vHaE~~~~~~~~~~~E~~av~~~l~~~la~~~g~~lhi~HvSt~~~l~~i~~ak 188 (346)
.+. +++..+.++++..|. ++++||...-- ...|..-+..+- .|.+.+++|+-...=|....+.+..-+.
T Consensus 143 atl-~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP----~~~~~~nL~~I~--~Lk~~f~~pVG~SdHt~G~~~~~aAval 215 (329)
T TIGR03569 143 ATL-EEIEAAVGVLRDAGTPDSNITLLHCTTEYP----APFEDVNLNAMD--TLKEAFDLPVGYSDHTLGIEAPIAAVAL 215 (329)
T ss_pred CCH-HHHHHHHHHHHHcCCCcCcEEEEEECCCCC----CCcccCCHHHHH--HHHHHhCCCEEECCCCccHHHHHHHHHc
Confidence 355 788999999988774 67889985311 112222232222 4666668887653333333444433344
Q ss_pred CCeeEEEccchhhccchhhhccCCCCCceEEeCCCCChhhHHHHHHHHH
Q 019093 189 EGFVAATVTPQHLVLNRNALFQGGLRPHNYCLPVLKREIHRQAVVSAVT 237 (346)
Q Consensus 189 g~~vt~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~ 237 (346)
|.. ..|. |.+++.... |.+..+-++| ++=..|.+.++
T Consensus 216 GA~-iIEk---H~tldk~~~---G~D~~~Sl~p-----~el~~lv~~ir 252 (329)
T TIGR03569 216 GAT-VIEK---HFTLDKNLP---GPDHKASLEP-----DELKEMVQGIR 252 (329)
T ss_pred CCC-EEEe---CCChhhcCC---CCChhhcCCH-----HHHHHHHHHHH
Confidence 665 4665 666666542 3345666776 34444555443
No 194
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=20.85 E-value=3.3e+02 Score=25.60 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=12.5
Q ss_pred HHHHH-HHhHHcCCcEEEecCCC
Q 019093 119 CVHVL-EEMVEQNMPLLVHGEVT 140 (346)
Q Consensus 119 l~~~l-~~~~~~g~~v~vHaE~~ 140 (346)
+..++ ..+++...||++|-...
T Consensus 62 ~~~~~~~~a~~~~VPValHLDH~ 84 (284)
T PRK12737 62 IVAIAEVAARKYNIPLALHLDHH 84 (284)
T ss_pred HHHHHHHHHHHCCCCEEEECCCC
Confidence 44433 33445577888776654
No 195
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=20.56 E-value=3.4e+02 Score=24.36 Aligned_cols=61 Identities=8% Similarity=-0.037 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCccEEeecC-CCCCCccccccCCCCCCccchhHHHHHHHHHHHhcCCHHHHHHHHchhhhhhcCCCC
Q 019093 230 QAVVSAVTSGSRKFFLGTD-SAPHERGRKECACGCAGIYNAPVALSLYAKVFEEMGALDKLEAFTSFNGPDFYGLPR 305 (346)
Q Consensus 230 ~aL~~al~~G~Id~~i~SD-HaP~~~~~K~~~~~~~G~~g~e~~lp~l~~~~~~~~~l~~lv~~~s~nPAki~gl~~ 305 (346)
..+++..++=.+-++++|| |.|.. +-+.+....++... ..+-+++.+.++.+|.+++..-+
T Consensus 157 ~~~~~~~~~~g~piiisSdAh~~~~------------l~~~~~~~~l~~~~---Gl~~~~~~~~~~~~~~~i~~~~~ 218 (237)
T PRK00912 157 RDNLALARKYDFPLVLTSGAMSCYD------------LRSPREMIALAELF---GMEEDEALKALSYYPESIIKKNR 218 (237)
T ss_pred HHHHHHHHhcCCCEEEeCCCCcccc------------cCCHHHHHHHHHHc---CCCHHHHHHHHHHhHHHHHHhhc
Confidence 3466666553345558999 44432 11233333333211 23678999999999999987743
Done!