Query 019098
Match_columns 346
No_of_seqs 159 out of 1858
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 06:39:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019098.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019098hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 4.6E-40 1E-44 300.6 31.5 336 6-343 8-350 (358)
2 PRK11272 putative DMT superfam 100.0 1.1E-32 2.4E-37 248.1 30.7 282 8-327 4-288 (292)
3 PRK11689 aromatic amino acid e 100.0 2.4E-32 5.2E-37 246.1 27.1 284 9-327 2-290 (295)
4 PRK10532 threonine and homoser 100.0 1.1E-31 2.4E-36 241.6 30.5 283 5-331 6-288 (293)
5 PRK11453 O-acetylserine/cystei 100.0 1.3E-31 2.8E-36 241.9 30.7 278 13-327 6-290 (299)
6 PRK15430 putative chlorampheni 100.0 4.2E-31 9.1E-36 238.2 25.3 278 7-324 4-285 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 1.2E-30 2.7E-35 231.3 27.9 257 23-319 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 3.8E-30 8.2E-35 233.0 27.8 284 13-328 4-297 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 6.4E-28 1.4E-32 216.0 25.9 275 13-321 3-280 (281)
10 PTZ00343 triose or hexose phos 100.0 8.5E-27 1.8E-31 214.2 30.3 284 9-325 47-349 (350)
11 PF06027 DUF914: Eukaryotic pr 100.0 5.7E-26 1.2E-30 203.6 31.2 298 8-328 10-309 (334)
12 TIGR00688 rarD rarD protein. T 99.9 9E-26 2E-30 199.6 24.2 249 11-299 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 1.7E-23 3.6E-28 188.3 31.6 283 7-325 3-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 1.9E-22 4E-27 167.8 25.2 274 12-328 13-286 (292)
15 KOG4510 Permease of the drug/m 99.9 8.5E-26 1.8E-30 188.8 3.7 295 8-330 35-331 (346)
16 COG2962 RarD Predicted permeas 99.9 3.5E-22 7.5E-27 170.8 23.7 282 7-327 3-286 (293)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 1.6E-21 3.6E-26 174.7 25.4 277 12-324 2-288 (290)
18 PF08449 UAA: UAA transporter 99.9 1.4E-19 3.1E-24 163.7 28.3 280 26-329 15-302 (303)
19 KOG2765 Predicted membrane pro 99.8 1.9E-19 4.2E-24 158.0 19.4 233 79-331 161-397 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 2.7E-18 5.8E-23 152.3 13.8 292 9-332 15-315 (316)
21 COG2510 Predicted membrane pro 99.7 1.6E-16 3.6E-21 118.7 11.9 135 12-154 4-138 (140)
22 KOG1580 UDP-galactose transpor 99.7 1.5E-15 3.2E-20 125.4 18.2 258 40-325 53-314 (337)
23 KOG1581 UDP-galactose transpor 99.7 2.1E-14 4.5E-19 123.4 21.5 265 39-328 50-317 (327)
24 COG2510 Predicted membrane pro 99.6 4.4E-15 9.5E-20 111.1 12.5 135 186-323 4-138 (140)
25 PF04142 Nuc_sug_transp: Nucle 99.6 8E-14 1.7E-18 121.2 20.6 230 73-314 13-243 (244)
26 KOG2766 Predicted membrane pro 99.6 6.5E-16 1.4E-20 129.0 6.6 289 7-328 14-303 (336)
27 KOG2234 Predicted UDP-galactos 99.6 2.6E-12 5.6E-17 113.6 29.3 296 11-329 15-327 (345)
28 KOG1444 Nucleotide-sugar trans 99.6 1.5E-12 3.3E-17 113.4 24.7 294 7-332 8-308 (314)
29 KOG1443 Predicted integral mem 99.6 2E-12 4.3E-17 111.3 23.7 256 40-324 45-315 (349)
30 PF00892 EamA: EamA-like trans 99.5 1.3E-13 2.8E-18 107.8 8.7 124 21-154 1-125 (126)
31 PF00892 EamA: EamA-like trans 99.5 2.8E-13 6E-18 106.0 9.7 125 195-323 1-125 (126)
32 KOG3912 Predicted integral mem 99.4 6.4E-12 1.4E-16 106.7 16.7 265 39-323 38-333 (372)
33 KOG1583 UDP-N-acetylglucosamin 99.3 9.2E-11 2E-15 99.6 16.8 236 70-326 60-316 (330)
34 PF06800 Sugar_transport: Suga 99.3 1.9E-09 4.1E-14 93.6 22.1 251 39-321 11-268 (269)
35 TIGR00950 2A78 Carboxylate/Ami 99.3 1.2E-10 2.6E-15 103.1 15.2 133 8-151 125-260 (260)
36 PF13536 EmrE: Multidrug resis 99.3 7.5E-12 1.6E-16 96.1 6.0 103 45-154 2-105 (113)
37 PRK13499 rhamnose-proton sympo 99.2 4.5E-08 9.8E-13 88.5 26.5 302 7-326 3-343 (345)
38 PRK15430 putative chlorampheni 99.2 7.3E-10 1.6E-14 100.0 14.1 138 182-323 5-144 (296)
39 PF03151 TPT: Triose-phosphate 99.1 9.9E-10 2.1E-14 89.1 12.5 138 186-324 1-153 (153)
40 COG5070 VRG4 Nucleotide-sugar 99.1 5.5E-10 1.2E-14 92.0 10.7 264 41-332 38-304 (309)
41 TIGR03340 phn_DUF6 phosphonate 99.1 2.5E-09 5.4E-14 95.9 15.5 133 187-324 3-135 (281)
42 KOG1442 GDP-fucose transporter 99.1 2E-10 4.2E-15 97.5 7.4 280 26-331 43-334 (347)
43 TIGR00688 rarD rarD protein. T 99.1 2.2E-09 4.8E-14 94.9 13.4 135 186-323 3-141 (256)
44 PRK10532 threonine and homoser 99.0 8.1E-09 1.7E-13 93.1 15.4 134 9-154 146-280 (293)
45 PRK11272 putative DMT superfam 99.0 8.9E-09 1.9E-13 92.8 14.9 136 9-154 148-284 (292)
46 KOG1582 UDP-galactose transpor 99.0 2.8E-08 6E-13 84.5 16.4 260 36-326 69-334 (367)
47 PLN00411 nodulin MtN21 family 99.0 9.4E-09 2E-13 94.7 14.9 138 10-154 188-327 (358)
48 PRK11689 aromatic amino acid e 99.0 1.2E-08 2.6E-13 92.0 14.1 133 9-154 154-286 (295)
49 PF05653 Mg_trans_NIPA: Magnes 99.0 1.3E-07 2.8E-12 84.9 20.3 277 7-326 3-294 (300)
50 PRK02971 4-amino-4-deoxy-L-ara 99.0 1.8E-08 3.9E-13 78.5 12.7 122 185-327 2-125 (129)
51 KOG4314 Predicted carbohydrate 98.9 1.5E-08 3.3E-13 82.1 10.9 214 84-325 60-277 (290)
52 TIGR00803 nst UDP-galactose tr 98.8 3.6E-08 7.9E-13 85.2 11.1 211 103-321 4-221 (222)
53 PF13536 EmrE: Multidrug resis 98.8 2.4E-08 5.1E-13 76.6 8.5 108 220-328 3-110 (113)
54 PF03151 TPT: Triose-phosphate 98.8 1.7E-07 3.6E-12 76.0 13.1 135 12-153 1-151 (153)
55 PRK11453 O-acetylserine/cystei 98.8 2.2E-07 4.9E-12 84.0 15.1 138 10-154 142-286 (299)
56 COG4975 GlcU Putative glucose 98.8 3.6E-09 7.9E-14 88.6 2.5 278 12-324 3-285 (288)
57 TIGR00817 tpt Tpt phosphate/ph 98.7 4.9E-07 1.1E-11 81.9 13.6 121 199-323 16-136 (302)
58 COG2962 RarD Predicted permeas 98.6 6.5E-07 1.4E-11 77.6 12.0 138 185-325 7-145 (293)
59 PTZ00343 triose or hexose phos 98.6 2.1E-06 4.6E-11 79.2 16.1 139 184-324 48-186 (350)
60 PRK15051 4-amino-4-deoxy-L-ara 98.5 6.1E-07 1.3E-11 68.2 9.1 67 257-323 42-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 98.5 2.4E-06 5.2E-11 76.8 12.6 129 9-154 150-287 (290)
62 COG5006 rhtA Threonine/homoser 98.5 3.9E-06 8.4E-11 71.1 12.6 138 5-153 142-280 (292)
63 COG0697 RhaT Permeases of the 98.4 6E-06 1.3E-10 73.9 14.6 132 10-154 153-286 (292)
64 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.6E-06 3.4E-11 66.0 9.0 67 82-154 41-108 (111)
65 PF06027 DUF914: Eukaryotic pr 98.3 2.6E-05 5.7E-10 70.7 14.8 142 7-155 164-305 (334)
66 PRK02971 4-amino-4-deoxy-L-ara 98.3 1.5E-05 3.2E-10 62.2 11.2 117 11-154 2-121 (129)
67 KOG2922 Uncharacterized conser 98.3 7.3E-06 1.6E-10 72.0 10.2 277 7-329 17-311 (335)
68 PF06800 Sugar_transport: Suga 98.2 2.1E-05 4.6E-10 68.7 11.8 135 7-152 134-268 (269)
69 PRK10452 multidrug efflux syst 98.2 1.2E-05 2.7E-10 61.5 8.3 70 258-327 36-106 (120)
70 PF08449 UAA: UAA transporter 98.1 7.9E-05 1.7E-09 67.5 13.3 131 197-333 12-145 (303)
71 PF06379 RhaT: L-rhamnose-prot 98.0 0.003 6.6E-08 56.6 21.0 303 7-325 3-341 (344)
72 PRK09541 emrE multidrug efflux 97.9 9.7E-05 2.1E-09 55.8 8.5 68 259-326 37-105 (110)
73 KOG4510 Permease of the drug/m 97.8 3.9E-06 8.4E-11 71.6 0.1 137 182-326 35-171 (346)
74 PF04657 DUF606: Protein of un 97.8 0.00063 1.4E-08 53.8 11.7 131 187-321 3-138 (138)
75 PF05653 Mg_trans_NIPA: Magnes 97.8 0.00014 3.1E-09 65.4 9.0 120 181-324 3-122 (300)
76 PRK13499 rhamnose-proton sympo 97.7 0.00031 6.8E-09 63.8 10.6 146 182-331 4-160 (345)
77 PRK10650 multidrug efflux syst 97.7 0.00055 1.2E-08 51.5 9.4 67 81-153 39-106 (109)
78 COG2076 EmrE Membrane transpor 97.6 0.00029 6.3E-09 52.2 7.2 65 261-325 39-104 (106)
79 PRK10650 multidrug efflux syst 97.6 0.0012 2.5E-08 49.7 10.1 63 261-323 44-107 (109)
80 PF04657 DUF606: Protein of un 97.6 0.002 4.3E-08 51.0 11.9 130 13-152 3-138 (138)
81 PRK11431 multidrug efflux syst 97.5 0.0007 1.5E-08 50.6 8.0 66 259-324 36-102 (105)
82 PRK10452 multidrug efflux syst 97.5 0.0007 1.5E-08 51.9 7.8 64 85-154 38-102 (120)
83 PF10639 UPF0546: Uncharacteri 97.5 0.0004 8.6E-09 52.3 6.3 110 17-153 2-112 (113)
84 PF07857 DUF1632: CEO family ( 97.4 0.0017 3.6E-08 56.6 10.7 186 12-211 1-209 (254)
85 KOG1441 Glucose-6-phosphate/ph 97.4 0.00061 1.3E-08 61.2 7.6 139 9-154 161-306 (316)
86 COG3238 Uncharacterized protei 97.4 0.0046 1E-07 49.0 11.6 139 185-326 5-148 (150)
87 COG2076 EmrE Membrane transpor 97.3 0.00065 1.4E-08 50.3 5.8 62 87-154 40-102 (106)
88 PF04142 Nuc_sug_transp: Nucle 97.3 0.0009 2E-08 58.4 7.0 79 250-329 16-94 (244)
89 PRK09541 emrE multidrug efflux 97.2 0.0028 6.1E-08 47.9 8.5 61 88-154 41-102 (110)
90 PRK11431 multidrug efflux syst 97.2 0.0036 7.8E-08 46.8 8.6 62 87-154 39-101 (105)
91 PF00893 Multi_Drug_Res: Small 97.2 0.0011 2.3E-08 48.7 5.7 57 259-315 36-93 (93)
92 COG4975 GlcU Putative glucose 97.2 0.00023 5E-09 60.3 2.3 133 186-328 3-140 (288)
93 KOG2765 Predicted membrane pro 96.9 0.014 3E-07 52.8 10.9 141 8-154 244-389 (416)
94 KOG2234 Predicted UDP-galactos 96.8 0.05 1.1E-06 49.1 14.2 145 186-331 16-171 (345)
95 PF00893 Multi_Drug_Res: Small 96.7 0.011 2.4E-07 43.3 7.9 52 88-145 40-92 (93)
96 COG3238 Uncharacterized protei 96.6 0.067 1.5E-06 42.5 11.7 139 10-153 4-144 (150)
97 PF10639 UPF0546: Uncharacteri 96.2 0.02 4.2E-07 43.3 6.4 108 192-321 3-111 (113)
98 TIGR00803 nst UDP-galactose tr 96.0 0.052 1.1E-06 46.7 9.2 65 82-152 157-221 (222)
99 KOG1581 UDP-galactose transpor 95.7 0.1 2.3E-06 46.0 9.5 141 8-154 169-312 (327)
100 KOG2922 Uncharacterized conser 95.3 0.0046 1E-07 54.7 -0.1 121 180-324 16-136 (335)
101 KOG1444 Nucleotide-sugar trans 95.0 0.6 1.3E-05 41.7 12.2 121 199-323 26-148 (314)
102 KOG1580 UDP-galactose transpor 94.4 0.089 1.9E-06 44.6 5.3 138 10-154 171-312 (337)
103 PF06379 RhaT: L-rhamnose-prot 94.4 0.29 6.2E-06 44.2 8.8 148 181-332 3-161 (344)
104 COG5070 VRG4 Nucleotide-sugar 92.9 0.61 1.3E-05 39.5 7.6 137 11-154 155-295 (309)
105 PF07857 DUF1632: CEO family ( 91.1 0.57 1.2E-05 41.0 5.9 130 186-327 1-137 (254)
106 KOG4314 Predicted carbohydrate 90.9 0.1 2.2E-06 43.1 1.0 62 264-325 65-126 (290)
107 KOG4831 Unnamed protein [Funct 89.9 1.7 3.7E-05 32.0 6.4 111 15-154 7-124 (125)
108 KOG3912 Predicted integral mem 89.5 0.47 1E-05 41.6 3.9 65 261-325 95-159 (372)
109 PRK02237 hypothetical protein; 87.7 3 6.6E-05 31.0 6.5 46 282-327 63-108 (109)
110 KOG1443 Predicted integral mem 86.7 7.1 0.00015 34.9 9.4 67 261-327 93-159 (349)
111 PF02694 UPF0060: Uncharacteri 84.8 1.5 3.2E-05 32.5 3.7 45 283-327 62-106 (107)
112 KOG1442 GDP-fucose transporter 83.3 2.3 5E-05 37.3 4.8 139 9-154 183-326 (347)
113 KOG4831 Unnamed protein [Funct 81.1 6 0.00013 29.2 5.6 59 264-322 64-123 (125)
114 KOG2766 Predicted membrane pro 80.7 0.12 2.6E-06 44.5 -3.7 134 184-325 17-151 (336)
115 PF04342 DUF486: Protein of un 75.8 3.1 6.7E-05 30.7 2.8 30 293-322 77-106 (108)
116 COG3169 Uncharacterized protei 74.5 8.9 0.00019 27.9 4.8 32 293-324 84-115 (116)
117 KOG1582 UDP-galactose transpor 74.1 17 0.00037 32.0 7.3 112 37-155 217-332 (367)
118 PF06570 DUF1129: Protein of u 68.9 70 0.0015 27.0 11.5 33 74-106 143-175 (206)
119 COG1742 Uncharacterized conser 67.7 14 0.00031 27.2 4.7 45 282-326 62-106 (109)
120 PF11044 TMEMspv1-c74-12: Plec 63.5 4.7 0.0001 24.5 1.3 6 318-323 22-27 (49)
121 COG3086 RseC Positive regulato 63.3 3.1 6.6E-05 32.7 0.6 28 274-301 70-97 (150)
122 KOG1583 UDP-N-acetylglucosamin 60.0 10 0.00022 33.5 3.2 69 264-332 76-145 (330)
123 PRK11902 ampG muropeptide tran 58.8 1.5E+02 0.0033 27.4 14.1 22 307-328 371-392 (402)
124 PF06946 Phage_holin_5: Phage 57.7 66 0.0014 23.3 6.5 65 270-334 22-90 (93)
125 PF07168 Ureide_permease: Urei 56.3 5.1 0.00011 35.7 0.8 113 16-129 1-124 (336)
126 PF07168 Ureide_permease: Urei 56.1 6 0.00013 35.3 1.3 69 252-322 73-144 (336)
127 TIGR00905 2A0302 transporter, 55.9 2E+02 0.0042 27.7 17.7 45 284-329 394-439 (473)
128 PF06609 TRI12: Fungal trichot 55.7 2.2E+02 0.0048 28.6 12.1 19 136-154 237-255 (599)
129 PF07444 Ycf66_N: Ycf66 protei 55.6 9.6 0.00021 27.1 2.0 32 303-334 4-35 (84)
130 PRK02237 hypothetical protein; 54.3 53 0.0011 24.6 5.7 32 117-154 73-104 (109)
131 PF15102 TMEM154: TMEM154 prot 53.5 12 0.00025 29.7 2.3 24 309-332 66-89 (146)
132 COG4858 Uncharacterized membra 52.3 1.4E+02 0.003 24.9 9.9 111 14-132 103-219 (226)
133 PRK11469 hypothetical protein; 49.3 14 0.00031 30.8 2.4 42 282-323 44-86 (188)
134 PF09656 PGPGW: Putative trans 48.7 71 0.0015 20.5 5.2 45 139-210 5-49 (53)
135 COG1971 Predicted membrane pro 46.6 24 0.00052 29.3 3.3 40 284-323 46-86 (190)
136 COG4657 RnfA Predicted NADH:ub 44.8 1.7E+02 0.0036 23.7 7.7 54 181-234 128-186 (193)
137 TIGR00836 amt ammonium transpo 43.3 2.9E+02 0.0064 26.1 16.2 62 255-316 283-362 (403)
138 PF04342 DUF486: Protein of un 43.1 23 0.00051 26.2 2.4 33 115-153 74-106 (108)
139 PF05297 Herpes_LMP1: Herpesvi 43.0 8 0.00017 34.0 0.0 29 101-129 47-76 (381)
140 TIGR02840 spore_YtaF putative 41.3 27 0.00058 29.6 2.9 45 279-323 34-80 (206)
141 PRK10862 SoxR reducing system 39.6 11 0.00025 30.3 0.4 9 287-295 83-91 (154)
142 PF02694 UPF0060: Uncharacteri 39.5 41 0.00089 25.0 3.2 36 113-154 67-102 (107)
143 PF04246 RseC_MucC: Positive r 36.1 12 0.00026 29.2 0.1 17 282-298 71-87 (135)
144 COG3169 Uncharacterized protei 34.9 49 0.0011 24.2 2.9 31 117-153 83-113 (116)
145 PF05961 Chordopox_A13L: Chord 33.5 60 0.0013 21.9 2.9 18 308-325 6-23 (68)
146 TIGR01647 ATPase-IIIA_H plasma 33.4 5.3E+02 0.011 26.8 11.3 112 38-151 625-750 (755)
147 PRK06638 NADH:ubiquinone oxido 33.0 3E+02 0.0064 23.1 12.9 34 293-326 133-168 (198)
148 TIGR01167 LPXTG_anchor LPXTG-m 33.0 74 0.0016 17.8 3.1 14 305-318 11-24 (34)
149 PRK11010 ampG muropeptide tran 32.7 4.6E+02 0.01 25.3 14.2 16 308-323 385-400 (491)
150 PRK13108 prolipoprotein diacyl 32.6 2.1E+02 0.0046 27.6 7.7 22 304-325 254-275 (460)
151 PF15099 PIRT: Phosphoinositid 32.4 14 0.0003 28.3 -0.1 17 252-268 57-73 (129)
152 PF11381 DUF3185: Protein of u 32.1 19 0.00041 23.7 0.4 16 139-154 1-16 (59)
153 PF15108 TMEM37: Voltage-depen 31.9 1.7E+02 0.0037 23.5 5.7 77 139-230 91-169 (184)
154 PF08693 SKG6: Transmembrane a 30.3 43 0.00094 20.1 1.7 19 310-328 21-39 (40)
155 PF06570 DUF1129: Protein of u 30.2 1.5E+02 0.0033 25.0 5.8 22 12-33 112-133 (206)
156 PRK12437 prolipoprotein diacyl 28.4 47 0.001 29.4 2.5 21 304-324 235-255 (269)
157 PRK12405 electron transport co 28.0 4E+02 0.0086 23.1 10.4 46 181-230 37-82 (231)
158 COG3476 Tryptophan-rich sensor 27.4 3.4E+02 0.0073 22.0 7.4 61 262-322 61-122 (161)
159 PF11139 DUF2910: Protein of u 27.2 3.8E+02 0.0082 22.6 10.2 46 109-154 158-210 (214)
160 TIGR00544 lgt prolipoprotein d 27.2 50 0.0011 29.5 2.4 23 304-326 246-268 (278)
161 PF05977 MFS_3: Transmembrane 25.6 6.5E+02 0.014 24.7 20.4 13 287-299 355-367 (524)
162 PF01102 Glycophorin_A: Glycop 24.8 50 0.0011 25.4 1.7 10 310-319 75-84 (122)
163 COG0474 MgtA Cation transport 22.3 9.7E+02 0.021 25.6 11.7 149 5-154 697-871 (917)
164 COG0682 Lgt Prolipoprotein dia 22.2 67 0.0015 28.7 2.2 25 307-331 255-279 (287)
165 PRK00052 prolipoprotein diacyl 22.1 67 0.0015 28.5 2.3 22 304-325 237-258 (269)
166 PHA03049 IMV membrane protein; 21.2 1.4E+02 0.003 20.1 2.9 17 308-324 6-22 (68)
167 PF08611 DUF1774: Fungal prote 21.1 1.3E+02 0.0027 22.1 3.0 11 334-344 87-97 (97)
168 PF08507 COPI_assoc: COPI asso 20.7 1.6E+02 0.0035 22.9 4.0 13 308-320 89-101 (136)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=4.6e-40 Score=300.65 Aligned_cols=336 Identities=44% Similarity=0.759 Sum_probs=262.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHH
Q 019098 6 SYKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSL 85 (346)
Q Consensus 6 ~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 85 (346)
+.|+.+++..|+...+++++..++.|..++.+++|..+.++|+.++.++++++.+.+++ +++.++.+++++.+..+.|+
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~-~~~~~~~~~~~~~~l~l~g~ 86 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNR-SRSLPPLSVSILSKIGLLGF 86 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHH-hcccCcchHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999998877654 33334456778888889999
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 86 IGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 86 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
++..++.+++.|++|+++++++++.++.|+++.+++++++.|+++.+||.++.+++|++++++|+.++...++......+
T Consensus 87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~ 166 (358)
T PLN00411 87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVAS 166 (358)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 88777789999999999999999999999999999999976666666666888999999999999887732332110000
Q ss_pred Ccc--cc-cccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccC-CCc
Q 019098 166 STA--LQ-SLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGES-NLS 241 (346)
Q Consensus 166 ~~~--~~-~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~ 241 (346)
++. +. +.+.....+..++..|+.+++.++++||+|++.+|+..+++++....++++..++.+...+.....++ +..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 000 00 00000112234557799999999999999999999999999755566777777777766666666543 223
Q ss_pred cCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Q 019098 242 AWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYV 321 (346)
Q Consensus 242 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~ 321 (346)
.|....+.....+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+++
T Consensus 247 ~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l 325 (358)
T PLN00411 247 VWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA 325 (358)
T ss_pred cceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 3322222234457777765 568999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCcccccc---cccccccc
Q 019098 322 VIWGKANDEEGENE---DSSKISLL 343 (346)
Q Consensus 322 ~~~~~~~~~~~~~~---~~~~~~~~ 343 (346)
..+.++++.+++++ ++++.|++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (358)
T PLN00411 326 VMWGKANEEKDQLLSFSGKEKTPLL 350 (358)
T ss_pred HHhhhhhhhhhcccCccccccchhh
Confidence 99877766655543 35555655
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=248.07 Aligned_cols=282 Identities=14% Similarity=0.128 Sum_probs=230.0
Q ss_pred chhHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 8 KDGLL-FTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 8 ~~~~~-~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
|+..+ .+..+...++||++.+..|... ++++|.+++++|+.+++++++++...+++ + . .+++++......|.+
T Consensus 4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~-~---~~~~~~~~~~~~g~~ 77 (292)
T PRK11272 4 RQLLPLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGH-P-L---PTLRQWLNAALIGLL 77 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCC-C-C---CcHHHHHHHHHHHHH
Confidence 34444 4455667789999999999986 58999999999999999999888765433 2 1 346677778888888
Q ss_pred H-HHHHHHHHHhh-cccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCC
Q 019098 87 G-SLLRILGYTGI-AYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISP 164 (346)
Q Consensus 87 ~-~~~~~~~~~al-~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~ 164 (346)
+ ..++.+++.+. +++++++++++.++.|+++.+++++ +|||++.+ +++|++++++|+.++. .+++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~-~~~~~---- 145 (292)
T PRK11272 78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLN-SGGNL---- 145 (292)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHh-cCccc----
Confidence 7 77888999999 9999999999999999999999986 69999555 9999999999998875 22111
Q ss_pred CCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc
Q 019098 165 SSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWR 244 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (346)
+....|+.++++++++||.+.+..|+..++ + +...+.++...+.+...+.....+.+....
T Consensus 146 ----------------~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (292)
T PRK11272 146 ----------------SGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTAL- 206 (292)
T ss_pred ----------------ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCccccc-
Confidence 122369999999999999999999996543 3 345567777888777777765443322111
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 245 LKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 245 ~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
.+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++..+
T Consensus 207 -~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 207 -PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 2445788999999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred cCC
Q 019098 325 GKA 327 (346)
Q Consensus 325 ~~~ 327 (346)
+++
T Consensus 286 ~~~ 288 (292)
T PRK11272 286 GKY 288 (292)
T ss_pred HHh
Confidence 544
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=2.4e-32 Score=246.12 Aligned_cols=284 Identities=12% Similarity=0.080 Sum_probs=212.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG- 87 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 87 (346)
+.+++++++.+.++||++++..|... ++++|..+.++|+.++.+++.++.. + + +.+++.++ .+..+.++
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~~---~-~----~~~~~~~~-~~~~~~l~~ 71 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTVG---F-P----RLRQFPKR-YLLAGGLLF 71 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHcc---c-c----ccccccHH-HHHHHhHHH
Confidence 45668889999999999999999986 6899999999999999988877531 1 1 11222222 33445555
Q ss_pred HHHHHHHHHhhcc----cchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccC
Q 019098 88 SLLRILGYTGIAY----SSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIIS 163 (346)
Q Consensus 88 ~~~~~~~~~al~~----~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~ 163 (346)
..++.+++.+++| +++++++++.++.|+++.+++++++|||++.+ +++|++++++|+.++. .++...+.
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~-~~~~~~~~ 144 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVL-GGDNGLSL 144 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhhee-cCCccchh
Confidence 7778888877764 57888899999999999999999999999554 9999999999998887 33211000
Q ss_pred CCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccC
Q 019098 164 PSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAW 243 (346)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 243 (346)
. +...+..+...|+.++++++++||.|.+..|+..++.+ +..... ..+.+.+.+.....+.....+
T Consensus 145 ~----------~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~~ 210 (295)
T PRK11689 145 A----------ELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFLSPQPAMVF 210 (295)
T ss_pred h----------hhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHHhcCccccC
Confidence 0 00001112346999999999999999999999877766 544322 223333333333322211111
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 244 RLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 244 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+...|..+++.++ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+++..
T Consensus 211 ---~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 211 ---SLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred ---CHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 3346777777774 789999999999999999999999999999999999999999999999999999999998876
Q ss_pred ccCC
Q 019098 324 WGKA 327 (346)
Q Consensus 324 ~~~~ 327 (346)
..++
T Consensus 287 ~~~~ 290 (295)
T PRK11689 287 LATR 290 (295)
T ss_pred hhHh
Confidence 6443
No 4
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=1.1e-31 Score=241.57 Aligned_cols=283 Identities=14% Similarity=0.041 Sum_probs=225.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHH
Q 019098 5 NSYKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLS 84 (346)
Q Consensus 5 ~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 84 (346)
++.++.++++.++++.++|+..+.+.|...+ +++|.++.++|++++.++++++... + +. +.++++++..+..|
T Consensus 6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~-~~---~~~~~~~~~~~~~g 78 (293)
T PRK10532 6 RKLPVWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--W-RL---RFAKEQRLPLLFYG 78 (293)
T ss_pred cccccchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--H-hc---cCCHHHHHHHHHHH
Confidence 3456689999999999999999999999974 6999999999999999988876432 1 11 24567787888888
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCC
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISP 164 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~ 164 (346)
.+....+.++++|++|+|++.++++..+.|+++.+++. ||+ + +..++.++++|+.++. ..+..
T Consensus 79 ~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~------~--~~~~~~i~~~Gv~li~-~~~~~---- 141 (293)
T PRK10532 79 VSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRP------V--DFVWVVLAVLGLWFLL-PLGQD---- 141 (293)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CCh------H--HHHHHHHHHHHHheee-ecCCC----
Confidence 87877788999999999999999999999999988763 433 2 3456778899998876 32211
Q ss_pred CCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc
Q 019098 165 SSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWR 244 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (346)
.++....|+++.++++++|+.|.+..|+..++.+ +... .+....+++...|.....++ ...+
T Consensus 142 --------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~-~~~~- 203 (293)
T PRK10532 142 --------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG-EALW- 203 (293)
T ss_pred --------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC-cccC-
Confidence 0112346999999999999999999999887776 5554 44556666666676554332 1111
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 245 LKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 245 ~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
+...|..+++.+++++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+....+
T Consensus 204 --~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 204 --HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 334566678999999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred cCCCCcc
Q 019098 325 GKANDEE 331 (346)
Q Consensus 325 ~~~~~~~ 331 (346)
..+++.|
T Consensus 282 ~~~~~~~ 288 (293)
T PRK10532 282 TIRREPK 288 (293)
T ss_pred cCCCCCC
Confidence 6544333
No 5
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.3e-31 Score=241.90 Aligned_cols=278 Identities=14% Similarity=0.121 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-HHHH
Q 019098 13 FTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG-SLLR 91 (346)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~ 91 (346)
.++.++++++||+++++.|... ++++|.++.++|+.++.+.+.++.. + ++ .++ +..+..|++. ....
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~---~-~~----~~~---~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVA---R-PK----VPL---NLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhc---C-CC----Cch---HHHHHHHHHHHHHHH
Confidence 3567888999999999999986 5799999999999998776655431 1 11 112 2344456655 5566
Q ss_pred HHHHHhhcc-cchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccc
Q 019098 92 ILGYTGIAY-SSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQ 170 (346)
Q Consensus 92 ~~~~~al~~-~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~ 170 (346)
.+++.+++| .++++++++.++.|+++.+++++++|||++.+ ++++++++++|+.++. .++..
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~-~~~~~---------- 136 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLI-EDSLN---------- 136 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhc-cccCC----------
Confidence 678899998 58899999999999999999999999999555 9999999999998886 22110
Q ss_pred cccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChH--HHHHHHHHHHHHHHHHHHHhhccCCC---ccCcc
Q 019098 171 SLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAE--FVVTLLYCVFATIISAPICFLGESNL---SAWRL 245 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~ 245 (346)
+.+....|+.+++.++++|+.|.+..|+..++.+++ .....+....+.+.........+++. ..+..
T Consensus 137 --------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (299)
T PRK11453 137 --------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT 208 (299)
T ss_pred --------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence 112234699999999999999999999987665422 23334444444443333333333221 11112
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 246 KPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 246 ~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
.+...|..+++.+++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..++
T Consensus 209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 24567899999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred CC
Q 019098 326 KA 327 (346)
Q Consensus 326 ~~ 327 (346)
++
T Consensus 289 ~~ 290 (299)
T PRK11453 289 LR 290 (299)
T ss_pred hh
Confidence 65
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=4.2e-31 Score=238.17 Aligned_cols=278 Identities=13% Similarity=0.065 Sum_probs=206.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCC-CC-CChhHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASL-PL-LKFPVISRICLLS 84 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~g 84 (346)
.+..||++++++++++|+..++..|.. ++++|.++.++|..++.+++.++...+++ .... ++ .+++++. ....+
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHH
Confidence 466899999999999999999999876 57999999999999999888777655432 1110 00 1233332 23355
Q ss_pred HHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccC
Q 019098 85 LIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIIS 163 (346)
Q Consensus 85 ~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~ 163 (346)
.++ ..++.++++|++++|+++++++.++.|+++.+++++++|||++.+ ++.|++++++|++++. .++.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~-~~~~---- 148 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQL-WTFG---- 148 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHH-HHcC----
Confidence 555 889999999999999999999999999999999999999999544 9999999999999876 2110
Q ss_pred CCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Q 019098 164 PSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESNLSA 242 (346)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 242 (346)
+. ..+.++++++||.|.+..|+..++.. +......+....+.+...+. .......
T Consensus 149 ----------------~~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 204 (296)
T PRK15430 149 ----------------SL-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSH 204 (296)
T ss_pred ----------------Cc-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCccc
Confidence 00 13678889999999999888654322 12233334444444332221 1111111
Q ss_pred CccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Q 019098 243 WRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVV 322 (346)
Q Consensus 243 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~ 322 (346)
+...+...+..+...++ .+.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|+.|+.+.
T Consensus 205 ~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~ 283 (296)
T PRK15430 205 MGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF 283 (296)
T ss_pred ccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 21112222344444455 67799999999999999999999999999999999999999999999999999998887665
Q ss_pred hc
Q 019098 323 IW 324 (346)
Q Consensus 323 ~~ 324 (346)
..
T Consensus 284 ~~ 285 (296)
T PRK15430 284 VM 285 (296)
T ss_pred HH
Confidence 53
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=1.2e-30 Score=231.31 Aligned_cols=257 Identities=17% Similarity=0.250 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-HHHHHHHHHhhccc
Q 019098 23 NVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG-SLLRILGYTGIAYS 101 (346)
Q Consensus 23 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~ 101 (346)
||.+++..|..++++.++.+..+.|...+.+++.+.... + .+++++++.+..|.++ .+++.++++|++|+
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~ 71 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR----R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRL 71 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh----c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 889999999998778999999999999998888776432 1 2345667778888887 99999999999999
Q ss_pred chhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCc
Q 019098 102 SPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQS 181 (346)
Q Consensus 102 ~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (346)
++++++++.++.|+++.+++++++|||++.+ +++|+.++++|+.++. .+++ .+
T Consensus 72 ~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~-~~~~--------------------~~ 124 (260)
T TIGR00950 72 PVGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLL-SDGN--------------------LS 124 (260)
T ss_pred ChhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhc-cCCc--------------------cc
Confidence 9999999999999999999999999999555 9999999999998876 2221 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHH
Q 019098 182 KWVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFF 260 (346)
Q Consensus 182 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 260 (346)
....|+.+++.++++|+.+.+..|+..++.+ ++.....+....+.+...+.....+++. .+ +...|..+++.+++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~ 200 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLI 200 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHH
Confidence 3357999999999999999999999887766 2234445678888888888766543322 22 44577788999999
Q ss_pred HHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Q 019098 261 GLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGF 319 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~ 319 (346)
++.+++.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+
T Consensus 201 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 201 GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.98 E-value=3.8e-30 Score=232.96 Aligned_cols=284 Identities=14% Similarity=0.114 Sum_probs=221.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019098 13 FTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRI 92 (346)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 92 (346)
.+..+...++..+..+..|..+++...|..+++.|+.++.+.+.+.... +. +++ ++.+++++++.+..|++.+.+..
T Consensus 4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GL-PKR-LKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CC-CCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 4455666666677778999998644789999999999988776655211 11 222 45778899999999999988899
Q ss_pred HHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccc
Q 019098 93 LGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSL 172 (346)
Q Consensus 93 ~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~ 172 (346)
+.++|++|+++++++++.++.|+++++++++++|||++.+ ++.|++++++|+.+.. .++
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~~------------- 139 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DTE------------- 139 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CCc-------------
Confidence 9999999999999999999999999999999999999555 9999999999997653 111
Q ss_pred cCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh--hCChHHHHHHHHHHHHHHHHHHHHhhccCCCc---cCc---
Q 019098 173 QWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIK--LYPAEFVVTLLYCVFATIISAPICFLGESNLS---AWR--- 244 (346)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~--- 244 (346)
.+....|++++++++++|+++.+..|+..+ +.+ +.+.+.++...+++.+.|.....++... .+.
T Consensus 140 -------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~ 211 (302)
T TIGR00817 140 -------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI 211 (302)
T ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence 112246999999999999999999999887 566 7889999999999999998776543211 010
Q ss_pred --cCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Q 019098 245 --LKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVV 322 (346)
Q Consensus 245 --~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~ 322 (346)
......+...+..+..+....+.+++.++++.+|++.++..+++|++++++|++++||+++..+++|+++++.|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 001111222223333233333346668999999999999999999999999999999999999999999999999999
Q ss_pred hccCCC
Q 019098 323 IWGKAN 328 (346)
Q Consensus 323 ~~~~~~ 328 (346)
.+.|.+
T Consensus 292 ~~~k~~ 297 (302)
T TIGR00817 292 SRVKAQ 297 (302)
T ss_pred HHHhcc
Confidence 876543
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=6.4e-28 Score=216.03 Aligned_cols=275 Identities=11% Similarity=0.074 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHH
Q 019098 13 FTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRI 92 (346)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 92 (346)
.++.++++++|+..+...|+... +-++ ..+++...+.+.+.++...+.. +..++..+++.+...+..+..+..++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHAD-KEPD--FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC-chhH--HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 45678899999999999997754 3334 3477777777777777665432 222233334444444445555599999
Q ss_pred HHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccc
Q 019098 93 LGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSL 172 (346)
Q Consensus 93 ~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~ 172 (346)
++++|+++.++++++++.++.|+++.+++++++|||++.+ +++|+.+++.|+.++. .++..
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~-~~~~~------------ 139 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLG-LSRFA------------ 139 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHh-ccccc------------
Confidence 9999999999999999999999999999999999999555 9999999999998876 22110
Q ss_pred cCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH---HHHHHHHHHHHHHHHHHhhccCCCccCccCChh
Q 019098 173 QWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFV---VTLLYCVFATIISAPICFLGESNLSAWRLKPDI 249 (346)
Q Consensus 173 ~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 249 (346)
.....|+.+++.++++|+.|.+..|+..++.++... ...+......+...+.....+... +. .+..
T Consensus 140 --------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 208 (281)
T TIGR03340 140 --------QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PYAR 208 (281)
T ss_pred --------ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hhHH
Confidence 111257788999999999999998876544431111 122222222111111111111111 11 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Q 019098 250 ELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYV 321 (346)
Q Consensus 250 ~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~ 321 (346)
.+..+++.+.+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++|++|+.+
T Consensus 209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 455667888889999999999999999999999999999999999999999999999999999999999875
No 10
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=8.5e-27 Score=214.22 Aligned_cols=284 Identities=16% Similarity=0.116 Sum_probs=224.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCC--ChhHHHHHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMS-YFVFIFYSSATATLVLLLFPFIFRSNTASLPLL--KFPVISRICLLSL 85 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~ 85 (346)
+.+..+.++....+........|..++ +++ |+.++++|++++.++..++.....+ + + ++. .+++++..+..|+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~-~-~-~~~~~~~~~~~~llp~gl 122 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFR-K-I-PRIKSLKLFLKNFLPQGL 122 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCC-C-C-CCCCCHHHHHHHHHHHHH
Confidence 567778888888888888889999975 688 9999999999998876554332222 2 1 333 3457888999999
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 86 IGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 86 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
++...+...+.|+++++++.++++.++.|+++++++++++|||++.+ ++.++++++.|+.+.. . ++
T Consensus 123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~-~-~~------ 188 (350)
T PTZ00343 123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALAS-V-KE------ 188 (350)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHhee-c-cc------
Confidence 99666777889999999999999999999999999999999999555 9999999999999986 2 11
Q ss_pred CcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC------hHHHHHHHHHHHHHHHHHHHHhhccCC
Q 019098 166 STALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP------AEFVVTLLYCVFATIISAPICFLGESN 239 (346)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~ 239 (346)
.+....|++++++++++++.+++..|+..++.+ ++.+...+....+.++++|.....|..
T Consensus 189 --------------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~ 254 (350)
T PTZ00343 189 --------------LHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGK 254 (350)
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 122356999999999999999999999887542 255566666888999999987755432
Q ss_pred C--ccCc----cCChhHHHHHHHHHHHHHHHHHHHHHH----HhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhh
Q 019098 240 L--SAWR----LKPDIELASIVYSAFFGLTFSTVVHTF----GLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSV 309 (346)
Q Consensus 240 ~--~~~~----~~~~~~~~~ll~~~~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~ 309 (346)
. ..+. ......+..+++ .++.+++++.+|+. ++++++|...++..+++|+++++++++++||+++..++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~ 333 (350)
T PTZ00343 255 KWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGY 333 (350)
T ss_pred HHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhH
Confidence 1 1110 001112233333 45567888989885 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc
Q 019098 310 IGGVIICVGFYVVIWG 325 (346)
Q Consensus 310 iG~~li~~G~~~~~~~ 325 (346)
+|+++++.|++++.+-
T Consensus 334 iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 334 LGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 11
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=5.7e-26 Score=203.64 Aligned_cols=298 Identities=19% Similarity=0.211 Sum_probs=236.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 8 KDGLLFTAMVVAECTNVGLNILFKLATNKGMS-YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
+..+..+.--..+++..++......+.+++.+ |...+++.+..-.++..+....+++ ++.+.+..+++|++.++.+++
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~-~~~~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRG-FKKWLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccc-cccchhhcchhHHHHHHHHHH
Confidence 44666677777888889999988888766655 7777777777777766666666555 333334445778888999999
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCC
Q 019098 87 GSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSS 166 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~ 166 (346)
.+.++.+.+.|++|++.+.++++.++.-+++++++++++|||. ++.+++|+++++.|+.++...+ ...++.
T Consensus 89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry------~~~~~~gv~i~i~Gv~lv~~sD-~~~~~~-- 159 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRY------SWFHILGVLICIAGVVLVVVSD-VLSGSD-- 159 (334)
T ss_pred HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhh------hHHHHHHHHHHHhhhhheeeec-cccccc--
Confidence 9999999999999999999999999999999999999999999 5559999999999999887322 211111
Q ss_pred cccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCc-cCcc
Q 019098 167 TALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLS-AWRL 245 (346)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~ 245 (346)
..+.++...|+++++.++++||+++++.++..++.+ ..+...+..+++.++..+...+.|.+.. ....
T Consensus 160 ----------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w 228 (334)
T PF06027_consen 160 ----------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHW 228 (334)
T ss_pred ----------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCC
Confidence 123456688999999999999999999999999988 7888899999999999888777765322 2211
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 246 KPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 246 ~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
+...+..++ ...++...-|.+....++..+|+..++=..+..+.+++++++++|+++++..++|.++|+.|.+++...
T Consensus 229 -~~~~~~~~v-~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 229 -TSQVIGLLV-GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred -ChhhHHHHH-HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 222333333 333356677777788899999999999999999999999999999999999999999999999998875
Q ss_pred CCC
Q 019098 326 KAN 328 (346)
Q Consensus 326 ~~~ 328 (346)
+++
T Consensus 307 ~~~ 309 (334)
T PF06027_consen 307 ESP 309 (334)
T ss_pred CCc
Confidence 543
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=9e-26 Score=199.56 Aligned_cols=249 Identities=11% Similarity=0.017 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCC----CCCCCChh-HHHHHHHHHH
Q 019098 11 LLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTA----SLPLLKFP-VISRICLLSL 85 (346)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~g~ 85 (346)
||++++++++++|+...++.|.. ++++|.+++++|++++.+++.++...+++ ++ +.++.+++ .+......|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQ-WAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcc-hHHHHHHHhCcccchHHHHHHHHHH
Confidence 58899999999999999999984 46999999999999999888776544332 11 10112222 2445667777
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 86 IGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 86 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
+...++.++++|++++++++++++.++.|+++++++++++|||++.+ ++++++++++|+.++. .++.
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~-~~~~------ 145 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNI-VLKG------ 145 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHH-HHcC------
Confidence 77999999999999999999999999999999999999999999555 9999999999998875 2110
Q ss_pred CcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCcc
Q 019098 166 STALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRL 245 (346)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (346)
+. ..+++.++++|+.|.+..|+..++ + ........ ........+.....+..... ..
T Consensus 146 --------------~~-----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 202 (256)
T TIGR00688 146 --------------SL-----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLET-LSLMPVAIYYLLQTDFATVQ-QT 202 (256)
T ss_pred --------------Cc-----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHHH-HHHHHHHHHHHHHhccCccc-cc
Confidence 01 135788999999999999996543 3 22222111 11111111111111111111 11
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHH
Q 019098 246 KPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIF 299 (346)
Q Consensus 246 ~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~ 299 (346)
.+...|..+++.|++ +.++|.++++++++.++++++.+.+++|+++.+++.+.
T Consensus 203 ~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 203 NPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred CchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 122478888888875 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=1.7e-23 Score=188.28 Aligned_cols=283 Identities=21% Similarity=0.273 Sum_probs=216.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
.+.......+++.++.|+......|.......++....+.|...+.+...+.....+. .. .+..++ +++..+.+.+
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~-~~~~~~~~~~ 78 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPR-GL--RPALRP-WLLLLLLALL 78 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcc-cc--cccccc-hHHHHHHHHH
Confidence 4566778888888899999999999996433777777777999988884433322111 11 111112 4445555666
Q ss_pred H-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHH-HHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCC
Q 019098 87 G-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAI-IFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISP 164 (346)
Q Consensus 87 ~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~-~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~ 164 (346)
+ ..+..+++.++++++++.++++.++.|+++.++++ +++|||++.+ ++.++++.+.|++++. .++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~-~~~~~~--- 148 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLIL-LGGGGG--- 148 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhee-cCCCcc---
Confidence 6 99999999999999999999999999999999997 6679999555 9999999999999987 332211
Q ss_pred CCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHhhccCCCccC
Q 019098 165 SSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTL-LYCVFATIISAPICFLGESNLSAW 243 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~ 243 (346)
+.. ...|+.+.+.++++++.+.+..|+.. +.+ +..... +..........+... .+.+
T Consensus 149 --------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 206 (292)
T COG0697 149 --------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG---- 206 (292)
T ss_pred --------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc----
Confidence 001 56899999999999999999999987 444 444444 333322222222211 1111
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 244 RLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 244 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
.......+..+.+.+++++.+++.+|++++++.++++.+.+.+++|+++.+++++++||+++..+++|+++++.|+.+..
T Consensus 207 ~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 207 APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 11244578889999999988999999999999999999999999999999999999999999999999999999999888
Q ss_pred cc
Q 019098 324 WG 325 (346)
Q Consensus 324 ~~ 325 (346)
.+
T Consensus 287 ~~ 288 (292)
T COG0697 287 LR 288 (292)
T ss_pred cc
Confidence 76
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.92 E-value=1.9e-22 Score=167.84 Aligned_cols=274 Identities=17% Similarity=0.070 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
+++.++.+.+.--....+.|..+ ..+++.-++.+|..++.++++++.+-++ .+.++++++..+..|+.-...|
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPwr------~r~~~~~~~~~~~yGvsLg~MN 85 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPWR------RRLSKPQRLALLAYGVSLGGMN 85 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHHH------hccChhhhHHHHHHHHHHHHHH
Confidence 68888888888888888999998 4799999999999999999988764432 3377889999999999999999
Q ss_pred HHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCccccc
Q 019098 92 ILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQS 171 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~ 171 (346)
.+||.+++.+|.+.+..+..+.|+.+.+++- | +..+...+.+++.|+.++. ..++.
T Consensus 86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~s---------R---r~~d~vwvaLAvlGi~lL~-p~~~~----------- 141 (292)
T COG5006 86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSS---------R---RLRDFVWVALAVLGIWLLL-PLGQS----------- 141 (292)
T ss_pred HHHHHHHHhccchhhhhhhhccHHHHHHHhc---------c---chhhHHHHHHHHHHHHhhe-eccCC-----------
Confidence 9999999999999999999999998887642 1 3448888899999998887 22221
Q ss_pred ccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHH
Q 019098 172 LQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIEL 251 (346)
Q Consensus 172 ~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 251 (346)
....+..|..+++.++.+|+.|.+..+|..+..+ .-.-+..-+.++++...|+..-... ..-+ ++.-.
T Consensus 142 -------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag-~~l~---~p~ll 209 (292)
T COG5006 142 -------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAG-PALF---SPSLL 209 (292)
T ss_pred -------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcc-hhhc---ChHHH
Confidence 1344558999999999999999999999987666 5666778888899999998764322 2122 44556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019098 252 ASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 252 ~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~ 328 (346)
..-+..+++.+.+.|.+-..++++.++...+.+.++||.++.+.|++++||.+|..||.|+..|+.+..-..+..+|
T Consensus 210 ~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~ 286 (292)
T COG5006 210 PLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK 286 (292)
T ss_pred HHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence 66778899999999999999999999999999999999999999999999999999999999999887655544333
No 15
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.91 E-value=8.5e-26 Score=188.82 Aligned_cols=295 Identities=17% Similarity=0.103 Sum_probs=221.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH
Q 019098 8 KDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG 87 (346)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (346)
+..+|.++..++ ..+....++.+... +.+|.+..-.|+++-.+...+....++. ... .+....++++++|+.|
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~-~v~---gp~g~R~~LiLRg~mG 107 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQ-PVI---GPEGKRKWLILRGFMG 107 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEee-eee---cCCCcEEEEEeehhhh
Confidence 456677777777 44555556666653 5799999999988888888777666554 321 2223344567889999
Q ss_pred HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCc
Q 019098 88 SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSST 167 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~ 167 (346)
..+..+.|||++|.+.+++.++..++|.++.+++|.++|||. |+.+..+..+.+.||++++ -+.-..+++
T Consensus 108 ~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~------t~~eaL~s~itl~GVVLIv-RPpFlFG~~--- 177 (346)
T KOG4510|consen 108 FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF------TKFEALGSLITLLGVVLIV-RPPFLFGDT--- 177 (346)
T ss_pred hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC------cHHHHHHHHHhhheEEEEe-cCCcccCCC---
Confidence 999999999999999999999999999999999999999999 6669999999999999987 332222222
Q ss_pred ccccccCCCCcC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccC
Q 019098 168 ALQSLQWPLQST-QSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLK 246 (346)
Q Consensus 168 ~~~~~~~~~~~~-~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 246 (346)
.+.+++. .+....|...++.++++-|--.++.|+..++.+ ..-...+..+++.+......... +.+.++
T Consensus 178 -----t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~i----g~~~lP 247 (346)
T KOG4510|consen 178 -----TEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASI----GAVQLP 247 (346)
T ss_pred -----ccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhc----cceecC
Confidence 1111111 234455778888888888888888899888877 34444555555555554443222 123222
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 247 -PDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 247 -~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
...+|+..+.+|+ .+++++++...++++-.+..++++.+.+.++++++++++|||.|+.+.+.|+++++.+.+....+
T Consensus 248 ~cgkdr~l~~~lGv-fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~ 326 (346)
T KOG4510|consen 248 HCGKDRWLFVNLGV-FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK 326 (346)
T ss_pred ccccceEEEEEehh-hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence 2346777888898 45799999999999999999999999999999999999999999999999999999998777766
Q ss_pred CCCCc
Q 019098 326 KANDE 330 (346)
Q Consensus 326 ~~~~~ 330 (346)
|..++
T Consensus 327 kwa~~ 331 (346)
T KOG4510|consen 327 KWAGT 331 (346)
T ss_pred HHhcc
Confidence 55443
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=3.5e-22 Score=170.77 Aligned_cols=282 Identities=11% Similarity=0.066 Sum_probs=223.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCC--CChhHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPL--LKFPVISRICLLS 84 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 84 (346)
.+..+|+++.+.+.++||..+...|.. +..++.|+...|...+..+++.+....++ .+.... .+++.+..+.+.+
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~-~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQ-WRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCcHHHHHHHHHH
Confidence 345799999999999999999999999 68999999999999999998887777665 332122 2334566666777
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCC
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISP 164 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~ 164 (346)
++...++..|.+|.+...+-+++.-++..|++.++++++|+|||+ ++.|+++++++.+||.......|+.
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl------s~~Q~iAV~lA~~GV~~~~~~~g~l---- 149 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL------SRLQWIAVGLAAAGVLIQTWLLGSL---- 149 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc------cHHHHHHHHHHHHHHHHHHHHcCCC----
Confidence 777999999999999999999999999999999999999999999 6679999999999998887322221
Q ss_pred CCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc
Q 019098 165 SSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWR 244 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (346)
. ...+.-++.|+.|...-|+. +.+ +.+-.......-........++.+++.....
T Consensus 150 -----------------p-----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~ 204 (293)
T COG2962 150 -----------------P-----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQ 204 (293)
T ss_pred -----------------c-----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhh
Confidence 1 14455567888888875553 333 4555555555555555554444444332122
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 245 LKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 245 ~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
..+...+..+...|. .+.++..++..+.++++-+..+.++|.+|..-.+++++++||+++..+++.-++|.+|+.++..
T Consensus 205 ~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 205 QNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred cCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235557777788888 6779999999999999999999999999999999999999999999999999999999988876
Q ss_pred cCC
Q 019098 325 GKA 327 (346)
Q Consensus 325 ~~~ 327 (346)
...
T Consensus 284 d~l 286 (293)
T COG2962 284 DGL 286 (293)
T ss_pred HHH
Confidence 543
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.90 E-value=1.6e-21 Score=174.75 Aligned_cols=277 Identities=14% Similarity=0.108 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
++++.++++++||...+..|+.. +.++.++. |..++.+++..+....++ ++. ..++.+...++.|++...++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~~---~~~~~~~~g~l~G~~w~ig~ 73 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL-PEF---WALSIFLVGLLSGAFWALGQ 73 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC-Ccc---cccHHHHHHHHHHHHHHhhh
Confidence 46788999999999999999983 78887765 777777777665554333 211 22444555666666678899
Q ss_pred HHHHHhhcccchhhhhhhhc-ccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccc
Q 019098 92 ILGYTGIAYSSPTLASMISN-LTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQ 170 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~-~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~ 170 (346)
.+++.++++++.+.+..+.+ +.+++..+.+.+++|||.+.++ ....++|++++++|+.++. ..++....+
T Consensus 74 ~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~-~~~~~~~~~------ 144 (290)
T TIGR00776 74 INQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTS-RSKDKSAGI------ 144 (290)
T ss_pred hhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEE-ecccccccc------
Confidence 99999999999999999988 8899999999999999995551 1112999999999998876 222111000
Q ss_pred cccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHH----HHHHHHHHHHhhccCCCccCccC
Q 019098 171 SLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCV----FATIISAPICFLGESNLSAWRLK 246 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~ 246 (346)
....+...|..+++.++++|+.|.+..|+. +++ +.+..+.+.. .+.+...+. . ...++ .
T Consensus 145 -------~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~-~----~~~~~--~ 207 (290)
T TIGR00776 145 -------KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH-I----LAKPL--K 207 (290)
T ss_pred -------ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH-h----cccch--H
Confidence 000233579999999999999999999976 355 6666444433 444433332 1 11112 1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhc-cCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhh----HHHHHHHHHHHH
Q 019098 247 PDIELASIVYSAFFGLTFSTVVHTFGLH-MKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSV----IGGVIICVGFYV 321 (346)
Q Consensus 247 ~~~~~~~ll~~~~~~~~~~~~~~~~a~~-~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~----iG~~li~~G~~~ 321 (346)
+...+..++ .|++ ..+++.+|..+.+ +.++++.+.+.+.+|+.+.+++++++||+.+..|+ +|+++|+.|+.+
T Consensus 208 ~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 208 KYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI 285 (290)
T ss_pred HHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence 223344444 8887 6899999999999 99999999999999999999999999999999999 999999999887
Q ss_pred Hhc
Q 019098 322 VIW 324 (346)
Q Consensus 322 ~~~ 324 (346)
...
T Consensus 286 ~~~ 288 (290)
T TIGR00776 286 LGI 288 (290)
T ss_pred Hhc
Confidence 654
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.87 E-value=1.4e-19 Score=163.66 Aligned_cols=280 Identities=16% Similarity=0.196 Sum_probs=216.5
Q ss_pred HHHHHHHHHh-cCCC--HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 019098 26 LNILFKLATN-KGMS--YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYTGIAYSS 102 (346)
Q Consensus 26 ~~~~~k~~~~-~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~ 102 (346)
..+...+... +... |..+++..+....+...+.....++ ++.++..++.++..+++..++..+.+.|++|+|
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~ 89 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-----PKSRKIPLKKYAILSFLFFLASVLSNAALKYIS 89 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-----cCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344444432 2344 8899999999988877776555432 223445567778888888999999999999999
Q ss_pred hhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCch
Q 019098 103 PTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSK 182 (346)
Q Consensus 103 ~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (346)
.+...++.+..|+++++++.+++|+|. ++.++.++++..+|+.+..+.+...... +......
T Consensus 90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y------~~~~~~~v~li~~Gv~~~~~~~~~~~~~------------~~~~~~~ 151 (303)
T PF08449_consen 90 YPTQIVFKSSKPIPVMILGVLILGKRY------SRRQYLSVLLITIGVAIFTLSDSSSSSS------------SNSSSFS 151 (303)
T ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccc------cHHHHHHHHHHHhhHheeeecccccccc------------ccccccc
Confidence 999999999999999999999999999 4459999999999999987432221111 1112223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhh--ccCCCc--cCccCChhHHHHHHHH
Q 019098 183 WVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFL--GESNLS--AWRLKPDIELASIVYS 257 (346)
Q Consensus 183 ~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~~~~~~ll~~ 257 (346)
+..|+.+.+++.++.|...+.+++..++++ ++.+.+++.+..+.+...+.... .++... ......+..+..++..
T Consensus 152 ~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~ 231 (303)
T PF08449_consen 152 SALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLF 231 (303)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHH
Confidence 344999999999999999999999998765 67889999999999988887776 322111 1111222334444444
Q ss_pred HHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019098 258 AFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKAND 329 (346)
Q Consensus 258 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~ 329 (346)
.+ ++.+++.+.+...++.+|...+++..++-+++.+++++++|++++..+++|.++++.|..++...|+|+
T Consensus 232 s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 232 SL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 44 667888888889999999999999999999999999999999999999999999999999999877665
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.84 E-value=1.9e-19 Score=157.98 Aligned_cols=233 Identities=19% Similarity=0.307 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecC
Q 019098 79 RICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKG 158 (346)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~ 158 (346)
..+....+..+.++.++.|+++++++..+++.+++.+|+.+++.++-+||. |+.+.+++++++.|++++.. ++
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f------t~sKllav~~si~GViiVt~-~~ 233 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF------TLSKLLAVFVSIAGVIIVTM-GD 233 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh------hHHHHHHHHHhhccEEEEEe-cc
Confidence 344445555899999999999999999999999999999999999999999 55599999999999999983 32
Q ss_pred CCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---hHHHHHHHHHHHHHHHHHHHHhh
Q 019098 159 PTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP---AEFVVTLLYCVFATIISAPICFL 235 (346)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~ 235 (346)
...++ ........+|+++++++++.||.|.++.|+...+++ +...+..+..++..++++|..++
T Consensus 234 s~~~~-------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~i 300 (416)
T KOG2765|consen 234 SKQNS-------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLII 300 (416)
T ss_pred ccccc-------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHH
Confidence 22111 223455678999999999999999999999888773 23334455666667778876554
Q ss_pred ccC-CCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHH
Q 019098 236 GES-NLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVI 314 (346)
Q Consensus 236 ~~~-~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~l 314 (346)
.+. ..+.+.++.......+++.++++++++-++|.+|.-.++|..+.+-+.++...+++.+.++-|..+|..+++|.+.
T Consensus 301 L~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~ 380 (416)
T KOG2765|consen 301 LDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIP 380 (416)
T ss_pred HHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 332 2334444455567778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCcc
Q 019098 315 ICVGFYVVIWGKANDEE 331 (346)
Q Consensus 315 i~~G~~~~~~~~~~~~~ 331 (346)
|++|.++++.......+
T Consensus 381 Ifv~Fv~vn~~~~~~~~ 397 (416)
T KOG2765|consen 381 IFVGFVIVNISSENSKK 397 (416)
T ss_pred HHHHHhheecccccccc
Confidence 99999998876554333
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.78 E-value=2.7e-18 Score=152.34 Aligned_cols=292 Identities=13% Similarity=0.136 Sum_probs=225.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATN--KGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
..+..++.....++..+.....|..++ +.--|..++..+...+.+.++.....+.. +.. +..++..++..+..|+.
T Consensus 15 ~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~-~~~-~~~~~~~~~~llpl~~~ 92 (316)
T KOG1441|consen 15 ILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLV-PPS-KISSKLPLRTLLPLGLV 92 (316)
T ss_pred hHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCC-CCC-ccccccchHHHHHHHHH
Confidence 344445555555555556668899886 45668888888888888777776555433 332 22345678889999999
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCC
Q 019098 87 GSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSS 166 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~ 166 (346)
.+++..+-+.++.+.+++..+.+..+.|++++++++++.+|+.+.+ .+..++....|+.+... ++
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~--~e------- 157 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV--TE------- 157 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee--cc-------
Confidence 9999999999999999999999999999999999999999999555 88999999999988762 22
Q ss_pred cccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh--hCC-hHHHHHHHHHHHHHHHHH-HHHhhccCCCc-
Q 019098 167 TALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIK--LYP-AEFVVTLLYCVFATIISA-PICFLGESNLS- 241 (346)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~- 241 (346)
.+....|...++++.+..+...++.++..+ +++ ++.+...++..++.+.+. |.....+++..
T Consensus 158 -------------~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~ 224 (316)
T KOG1441|consen 158 -------------LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFV 224 (316)
T ss_pred -------------ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccccee
Confidence 234457999999999999999999999985 322 588999999999999888 77666555333
Q ss_pred --cCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Q 019098 242 --AWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGF 319 (346)
Q Consensus 242 --~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~ 319 (346)
.....+. ....+++.. ++...-....+..+.+++|...++.+...-++.++.++++|+|+.++.+..|.++.++|+
T Consensus 225 ~~~~~~~~~-~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv 302 (316)
T KOG1441|consen 225 GFLTAPWFV-TFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGV 302 (316)
T ss_pred eeeccccch-hhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHH
Confidence 1100011 223333333 344455566677899999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCccc
Q 019098 320 YVVIWGKANDEEG 332 (346)
Q Consensus 320 ~~~~~~~~~~~~~ 332 (346)
+++.+.|.+++++
T Consensus 303 ~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 303 FLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHhhhhhcc
Confidence 9999887765543
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.71 E-value=1.6e-16 Score=118.72 Aligned_cols=135 Identities=18% Similarity=0.156 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
..++.++++++++...++.|..+ |++||...++.|..+...++..++...++ .......+.+.|....+.|+.+.+++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGla~glsw 81 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHHHHHHHH
Confidence 45788999999999999999996 79999999999999999999999888777 55544567888888888898889999
Q ss_pred HHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 92 ILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.+||.|++..+++.+.++..++|+++++++++++|||++.+ +|+|+.+..+|++++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999666 9999999999998875
No 22
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.5e-15 Score=125.43 Aligned_cols=258 Identities=13% Similarity=0.149 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHH
Q 019098 40 YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFT 119 (346)
Q Consensus 40 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~l 119 (346)
...++++.++.-.++--++..++++ .+.++..-+.+...++...+.....+.|++|+|-....+-.+..|+-+++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~-----~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKK-----TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeeccc-----ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 3445666666666665554444433 11333333445555555577778888999999999999999999999999
Q ss_pred HHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeec-CCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHH
Q 019098 120 LAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYK-GPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLIS 198 (346)
Q Consensus 120 la~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a 198 (346)
++..+.+++- +|.+...++.+++|+.+.. ++ +...+.. +.....|.++.+++-...+
T Consensus 128 lGVl~~~KsY------~w~kY~cVL~IV~GValFm-YK~~Kv~g~e---------------~~t~g~GElLL~lSL~mDG 185 (337)
T KOG1580|consen 128 LGVLFAHKSY------HWRKYCCVLMIVVGVALFM-YKENKVGGAE---------------DKTFGFGELLLILSLAMDG 185 (337)
T ss_pred eehhhhcccc------cHHHHHHHHHHHHHHHHhh-ccccccCCCc---------------ccccchHHHHHHHHHHhcc
Confidence 9999988888 5559999999999999988 44 3332222 4556689999999999999
Q ss_pred HHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCC--CccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019098 199 VWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESN--LSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHM 275 (346)
Q Consensus 199 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~ 275 (346)
.....+.+....+. +...++++.++.+.+.+..-.+++++- ...+..+.+..|.-+...++ ++++++++.+.-+..
T Consensus 186 lTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~ 264 (337)
T KOG1580|consen 186 LTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEE 264 (337)
T ss_pred cchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHH
Confidence 99999999877764 566788999999998887766655442 22233345556777787887 788999999999999
Q ss_pred CCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 276 KGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 276 ~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
.+|-.-+++..+.-.|+++.++++++.+++..||+|.++++.++..-...
T Consensus 265 FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 265 FGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred hCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 99999999999999999999999999999999999999999998765543
No 23
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.67 E-value=2.1e-14 Score=123.40 Aligned_cols=265 Identities=14% Similarity=0.159 Sum_probs=210.9
Q ss_pred CHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHH
Q 019098 39 SYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTF 118 (346)
Q Consensus 39 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ 118 (346)
++..+++.+-+++.++-...+.++++ + ...++.++.+...++.+.++..|-|.|++|++-....+-.+..-+-++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~-~----~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKK-E----LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccc-c----CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 56777788888887777665555444 2 233456777888899999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHH
Q 019098 119 TLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLIS 198 (346)
Q Consensus 119 lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a 198 (346)
+++.+..|.|.+.+ +....++.-.|+.+..+.+.+.. ...++.++...|..++...-++.+
T Consensus 125 lmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s-------------~~~~g~~ns~~G~~Ll~~~L~fDg 185 (327)
T KOG1581|consen 125 LMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS-------------SSKSGRENSPIGILLLFGYLLFDG 185 (327)
T ss_pred HHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC-------------ccccCCCCchHhHHHHHHHHHHHh
Confidence 99999999999544 89999999999999885533321 112345677889999999999999
Q ss_pred HHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccC--CCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019098 199 VWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGES--NLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHM 275 (346)
Q Consensus 199 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~ 275 (346)
+.+..++++.+++. ++..++++.+++.++......+..+. +...+...++..+.-++.... ++.+++.+.++-+++
T Consensus 186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~ 264 (327)
T KOG1581|consen 186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIER 264 (327)
T ss_pred hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhh
Confidence 99999999998764 68889999999999988776443332 122233334444555565666 566899999999999
Q ss_pred CCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019098 276 KGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 276 ~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~ 328 (346)
.|+...+.++.+.-+++..++.+.+|.+.+..|++|..+++.|+.+-...|++
T Consensus 265 FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 265 FGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999887665544
No 24
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.64 E-value=4.4e-15 Score=111.12 Aligned_cols=135 Identities=19% Similarity=0.140 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFS 265 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 265 (346)
...+++++++++++..+..|...++.+ |...++.+.....+.+..+.+..++.. .-...++..|..+.+.|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~-~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQ-AGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCcee-cccccCcceehhhhHHHH-HHHHH
Confidence 457899999999999999999999888 888899999998888887766554321 111125567888888886 78899
Q ss_pred HHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 266 TVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+.+|+++++..+++++..+..++|+++++++++++||+++..+++|+.+|++|..++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999999987654
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.62 E-value=8e-14 Score=121.22 Aligned_cols=230 Identities=13% Similarity=0.201 Sum_probs=165.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhh
Q 019098 73 KFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAML 152 (346)
Q Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~ 152 (346)
++++..++.+.+++.++.+.+.|+++++++++..+++.++..+++++++++++|+|++.+ ||.++.+.++|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence 457788899999999999999999999999999999999999999999999999999555 99999999999988
Q ss_pred eeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHH-HHHHHHHHHHHHHHHH
Q 019098 153 VVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEF-VVTLLYCVFATIISAP 231 (346)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 231 (346)
+. .++...... +++.+..+.........|....+.++++.++..+..++..|+.+.+. .........+.++..+
T Consensus 87 v~-~~~~~~~~~----~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~ 161 (244)
T PF04142_consen 87 VQ-LSSSQSSDN----SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL 161 (244)
T ss_pred ee-cCCcccccc----ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 86 222221100 00001111122455678999999999999999999999999875333 3445555566666655
Q ss_pred HHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHH
Q 019098 232 ICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIG 311 (346)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG 311 (346)
...+.+.+...-. .--..|-...+.-++.+.++=++....+|+.+...=+.....+.+++.+.+++++|.++|....+|
T Consensus 162 ~~~~~~~~~~~~~-g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg 240 (244)
T PF04142_consen 162 ALLLSDGSAISES-GFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG 240 (244)
T ss_pred HHhcccccccccC-CchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence 5444333211100 000111122223333444444555667888888888889999999999999999999999999999
Q ss_pred HHH
Q 019098 312 GVI 314 (346)
Q Consensus 312 ~~l 314 (346)
+.+
T Consensus 241 ~~~ 243 (244)
T PF04142_consen 241 AAL 243 (244)
T ss_pred eec
Confidence 865
No 26
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.62 E-value=6.5e-16 Score=129.03 Aligned_cols=289 Identities=15% Similarity=0.084 Sum_probs=218.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKG-MSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSL 85 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 85 (346)
+|.+.+..+--..++|-.+...........+ -.|...++..+..-+++..+++.++++ .-+..|+..+++++
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-------~~~~~~~hYilla~ 86 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-------YIKAKWRHYILLAF 86 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-------HHHHHHHHhhheeE
Confidence 3445555555555666666666666665553 357888999998888888888877554 22345666888888
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 86 IGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 86 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
..+-++++...|.||++...+..+..-....+.+++|+|+|.|-++. ++.|+.+++.|++.+++ + |.+.
T Consensus 87 ~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~-s-DV~a--- 155 (336)
T KOG2766|consen 87 VDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVF-S-DVHA--- 155 (336)
T ss_pred EeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEE-e-eecc---
Confidence 88888999999999999999999999888888999999999998555 99999999999999873 2 2222
Q ss_pred CcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCcc
Q 019098 166 STALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRL 245 (346)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 245 (346)
.++.++.+-..|+.+.++++-+||..++....+.++.+ ..+.+....++|+++..+- .+++..... .+
T Consensus 156 ---------gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~-tl 223 (336)
T KOG2766|consen 156 ---------GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHVS-TL 223 (336)
T ss_pred ---------ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhcccee-eE
Confidence 22455667778999999999999999999999999998 8899999999999988876 554442211 11
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 246 KPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 246 ~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
..+......+. ..++.++-|.+.-.-+|.-+++..++-..++-..+.++ ..||-+.++...+.-+.+..|.+++..+
T Consensus 224 ~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 224 HWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred eehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 11122222222 33455555666666788999999998888888888888 6788889999999999999999988554
Q ss_pred CCC
Q 019098 326 KAN 328 (346)
Q Consensus 326 ~~~ 328 (346)
.+.
T Consensus 301 e~~ 303 (336)
T KOG2766|consen 301 EKD 303 (336)
T ss_pred ccC
Confidence 443
No 27
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=2.6e-12 Score=113.62 Aligned_cols=296 Identities=14% Similarity=0.172 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHhHhhhhccCC---CCCCCC------ChhHHH
Q 019098 11 LLFTAMVVAECTNVGLNILFKLATNKG---MSYFVFIFYSSATATLVLLLFPFIFRSNT---ASLPLL------KFPVIS 78 (346)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~------~~~~~~ 78 (346)
.-++.++...+.+++.....|..-.++ +.|...++.--.+-.++....++...+ + +..+.+ .+++..
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~~l 93 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEER-KYAKKSLKSLSKEILAAPRETL 93 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh-HHhhhhhhhcCHHHHhChHHHH
Confidence 446667777888999999999986555 778888888888888777776666532 1 111112 234566
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecC
Q 019098 79 RICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKG 158 (346)
Q Consensus 79 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~ 158 (346)
+..+.+++.++.+.++|.++.+.+++..++..++..+.|+++..+++++|++ +.||.++++.++|+.++-+ +.
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs------~~Qw~Al~lL~~Gv~~vQ~-~~ 166 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLS------RLQWMALVLLFAGVALVQL-PS 166 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhh------HHHHHHHHHHHHHHHHHhc-cC
Confidence 7888888888888999999999999999999999999999999999999994 4599999999999988852 11
Q ss_pred CCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHH-HHHHHHHHHHHHHHHHHhhcc
Q 019098 159 PTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFV-VTLLYCVFATIISAPICFLGE 237 (346)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~ 237 (346)
.... ++.+....++...|....+.+.+..++..+...+.+|+.+.+.. .+....++|.++.....+..+
T Consensus 167 ~~~~----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d 236 (345)
T KOG2234|consen 167 LSPT----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQD 236 (345)
T ss_pred CCCC----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1111 11113445667789999999999999999999999987653333 334444455555554444444
Q ss_pred CCCccC----ccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHH
Q 019098 238 SNLSAW----RLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGV 313 (346)
Q Consensus 238 ~~~~~~----~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~ 313 (346)
.+...| .-.+...|..++..++.+ .+-..-+|+.+-..-+.......+++.+.++.++|-+||....+|+.
T Consensus 237 ~~~i~~~gff~G~s~~vw~vVl~~a~gG-----Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~ 311 (345)
T KOG2234|consen 237 GEAINEYGFFYGYSSIVWLVVLLNAVGG-----LLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGAL 311 (345)
T ss_pred ccccccCCccccccHHHHHHHHHHhccc-----hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 333222 111222444444444433 23333455555555556666888999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCC
Q 019098 314 IICVGFYVVIWGKAND 329 (346)
Q Consensus 314 li~~G~~~~~~~~~~~ 329 (346)
+++.++.++...+.+.
T Consensus 312 lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 312 LVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHhhcCCccc
Confidence 9999999999665543
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=1.5e-12 Score=113.41 Aligned_cols=294 Identities=11% Similarity=0.101 Sum_probs=218.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIF--YSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLS 84 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 84 (346)
.++.++.+..+.-++.-..+.++.|..+...--|..+.. ++.+.+.+.+...-.. + -...+.++++..++.+...
T Consensus 8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~--~-lv~~~~l~~~~~kk~~P~~ 84 (314)
T KOG1444|consen 8 KKQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL--G-LVNFRPLDLRTAKKWFPVS 84 (314)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh--c-eeecCCcChHHHHHHccHH
Confidence 345566666666666666777888998865444454444 7777776666554332 2 2233568888999999999
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCC
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISP 164 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~ 164 (346)
++-......-..+++|.+....+++.+..|+++++....++|.|+ ++..|.++....+|..... .. +
T Consensus 85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~------~~~v~~Sv~~m~~~s~~~~-~~-d----- 151 (314)
T KOG1444|consen 85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRP------SNKVWASVFAMIIGSVAAA-FT-D----- 151 (314)
T ss_pred HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCc------hhhHHHHHHHHHHHHHhhc-cc-c-----
Confidence 998888888889999999999999999999999999999999888 5558999999988887765 11 1
Q ss_pred CCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCCC---
Q 019098 165 SSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESNL--- 240 (346)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--- 240 (346)
......|+.+++...+.-+.+.+..|+..+..+ +....+++..+..........+++++-.
T Consensus 152 ---------------~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~ 216 (314)
T KOG1444|consen 152 ---------------LSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALS 216 (314)
T ss_pred ---------------ceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHH
Confidence 122224999999999999999999998777543 3566778888888777776666665411
Q ss_pred -ccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Q 019098 241 -SAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGF 319 (346)
Q Consensus 241 -~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~ 319 (346)
..-.......+..+.+.++.+.++ .++-..+.+..+++..++.+..+-..+.+-+.+++|++.++..++|..+-+.|-
T Consensus 217 ~~~~~~~~~~~~~~~~lScv~gf~i-sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg 295 (314)
T KOG1444|consen 217 LNFDNWSDSSVLVVMLLSCVMGFGI-SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG 295 (314)
T ss_pred hhcccccchhHHHHHHHHHHHHHHH-HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence 110111333566666666655544 446667889999999999998888888888889999999999999999999999
Q ss_pred HHHhccCCCCccc
Q 019098 320 YVVIWGKANDEEG 332 (346)
Q Consensus 320 ~~~~~~~~~~~~~ 332 (346)
.++...+.++++.
T Consensus 296 v~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 296 VLYSYATFRKKKQ 308 (314)
T ss_pred hHHhhhhhhhccC
Confidence 8888766554443
No 29
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.57 E-value=2e-12 Score=111.27 Aligned_cols=256 Identities=17% Similarity=0.192 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhhcc-CCCCCCCCChhHH-HHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHH
Q 019098 40 YFVFIFYSSATATLVLLLFPFIFRS-NTASLPLLKFPVI-SRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFT 117 (346)
Q Consensus 40 ~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~ 117 (346)
|..++.++.++-.++-......+++ .++.....+|++. ++....++..++.-.+.+++++|++.+..++..+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 7778888888777776665544443 1221234666554 4566777777999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHH
Q 019098 118 FTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLI 197 (346)
Q Consensus 118 ~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~ 197 (346)
.+++.+|.-||.++. -..-+.+...|+.+++ .++. +-...|..+.+.+.++.
T Consensus 125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft-~KsT---------------------qf~i~Gf~lv~~aS~~s 176 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFT-YKST---------------------QFNIEGFFLVLAASLLS 176 (349)
T ss_pred HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEE-eccc---------------------ceeehhHHHHHHHHHhh
Confidence 999999999999443 6777777778888777 3332 23346999999999999
Q ss_pred HHHHHHHHHHHhhCC----hHHHHHHHHHHHHHHHHHHHHhhccCCCc-----cCccCCh-hHHHHHHHHHHHHHHHHHH
Q 019098 198 SVWYIIQTQIIKLYP----AEFVVTLLYCVFATIISAPICFLGESNLS-----AWRLKPD-IELASIVYSAFFGLTFSTV 267 (346)
Q Consensus 198 a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~-~~~~~ll~~~~~~~~~~~~ 267 (346)
++-....+..+++.| +|....+.......+.+.|..+.+|+... .+...+. ..+..+...+. ++..++.
T Consensus 177 GlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~ 255 (349)
T KOG1443|consen 177 GLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFL 255 (349)
T ss_pred hhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHH
Confidence 999999999998765 67777777777777778888787777322 1221122 12333333332 3334433
Q ss_pred H---HHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 268 V---HTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 268 ~---~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
+ -+.-+.+++....++.....-+.+.+++.++.++.++..-|.|..+...|+.....
T Consensus 256 l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 256 LEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 3 33456888999999999999999999999999999999999999999999998844
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.48 E-value=1.3e-13 Score=107.84 Aligned_cols=124 Identities=23% Similarity=0.363 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-HHHHHHHHHhhc
Q 019098 21 CTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG-SLLRILGYTGIA 99 (346)
Q Consensus 21 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~ 99 (346)
++|+...+..|+.. ++.||....++|+..+.+ +.+.....++ +. .++.+++++...+..+.++ ..++.++++|++
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGR-KP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhcc-cc-ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 36899999999996 569999999999999998 6666555555 33 2557778888888889887 999999999999
Q ss_pred ccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 100 YSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 100 ~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
+++++.++++.++.|+++.+++++++||+++.+ +++|+++++.|++++.
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999555 9999999999998764
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.47 E-value=2.8e-13 Score=105.96 Aligned_cols=125 Identities=16% Similarity=0.320 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019098 195 LLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLH 274 (346)
Q Consensus 195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~ 274 (346)
++||.+.+..|+..++.+ +....+++...+.+ ..+...+.+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 368889999999999987 89999999999997 666555554433 22224556778888888888999999999999
Q ss_pred cCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 275 MKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 275 ~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988754
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.45 E-value=6.4e-12 Score=106.72 Aligned_cols=265 Identities=15% Similarity=0.177 Sum_probs=187.1
Q ss_pred CHHHHHHHHHHHHHHHHHhHhhhhcc-CCCC--------CCCCChh-HHHHHHHHHHHHHHHHHHHHHhhcccchhhhhh
Q 019098 39 SYFVFIFYSSATATLVLLLFPFIFRS-NTAS--------LPLLKFP-VISRICLLSLIGSLLRILGYTGIAYSSPTLASM 108 (346)
Q Consensus 39 ~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~--------~~~~~~~-~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~ 108 (346)
+|+..+..-++.-++.+..+.+.+.+ +.+. .++.+.+ ....++..++|-..+..+.|.|+.+++++..++
T Consensus 38 hpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQM 117 (372)
T KOG3912|consen 38 HPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQM 117 (372)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHHHH
Confidence 57888888888777777777666544 1111 0111111 122344566667999999999999999999999
Q ss_pred hhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHH
Q 019098 109 ISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGL 188 (346)
Q Consensus 109 i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 188 (346)
+....-+|+.+++.-+++.+++.+ ||.|+.....|++++.. .+..... +...+.++...|+.
T Consensus 118 lRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~--~d~~~~~----------~p~~d~s~iitGdl 179 (372)
T KOG3912|consen 118 LRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGS--LDVHLVT----------DPYTDYSSIITGDL 179 (372)
T ss_pred hhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeee--eeccccc----------CCccccccchhhhH
Confidence 999999999999999999999555 99999999999988862 2221111 11223466788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHh----hccCCCccCccCCh---hHHH--------
Q 019098 189 LLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICF----LGESNLSAWRLKPD---IELA-------- 252 (346)
Q Consensus 189 ~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~---~~~~-------- 252 (346)
+.+++-+.-|+..++..|..++++ +|.....+..++|.+.+...+. +..++ ++..++. .+|.
T Consensus 180 lIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~--sfS~~~~g~~eD~~~~~~~~~e 257 (372)
T KOG3912|consen 180 LIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGD--SFSCNPRGVLEDWGDAFAALQE 257 (372)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCC--cCcCCCCcchhhHHHHHHHhcC
Confidence 999999999999999999998865 6889999988888554443333 32221 1111111 1111
Q ss_pred -HHHHHHHHHHHHHHHHHHH----HhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 253 -SIVYSAFFGLTFSTVVHTF----GLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 253 -~ll~~~~~~~~~~~~~~~~----a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
..+++...+...+..+++. -.|+.+++.-.++..+...+--+++.....|.+...|+.|-++.+.|+.+++
T Consensus 258 ~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 258 SPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred CchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222233333333332 2477888888899999999999999999999999999999999999998876
No 33
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.34 E-value=9.2e-11 Score=99.63 Aligned_cols=236 Identities=11% Similarity=0.078 Sum_probs=162.6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHhhcc-cchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhh
Q 019098 70 PLLKFPVISRICLLSLIGSLLRILGYTGIAY-SSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVS 148 (346)
Q Consensus 70 ~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~ 148 (346)
++++.+++..... +-...+.+-++++++ ++...-.++.+-.++-++++++++.|+|-+.+ |..++++..+
T Consensus 60 ~kiplk~Y~i~V~---mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTi 130 (330)
T KOG1583|consen 60 PKIPLKDYAITVA---MFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITI 130 (330)
T ss_pred CCCchhhhheehh---eeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhh
Confidence 4455555543222 224455666778887 46667778899999999999999999988555 9999999999
Q ss_pred hhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHH
Q 019098 149 GAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATI 227 (346)
Q Consensus 149 Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i 227 (346)
|+++..+.++....... +.-++.+.......|..|..+...+-+..|.-.+.++..-|++. ++.+.+++.......
T Consensus 131 GiiIcTl~s~~d~~~~~---~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP 207 (330)
T KOG1583|consen 131 GIIICTLFSSKDGRSKL---SGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLP 207 (330)
T ss_pred hheeEEeecCcchhhhh---cccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccc
Confidence 99998865543322210 00111122334456788999999998888888888888888764 688899999887654
Q ss_pred HHHHHHhhccCC----------Cc--cCccC---ChhHHHHHHHHHHHHHHHHHHHHHHHh----ccCCceeeeehhhHH
Q 019098 228 ISAPICFLGESN----------LS--AWRLK---PDIELASIVYSAFFGLTFSTVVHTFGL----HMKGPVYTAIFKPLS 288 (346)
Q Consensus 228 ~~~~~~~~~~~~----------~~--~~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~a~----~~~~~~~~s~~~~~~ 288 (346)
.. ++..++ .+ ..+.. -+..|..+ ++.++.+.+..+++ .+.++-.++++..+.
T Consensus 208 ~F----lf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL-----l~n~L~Qy~CikgVy~L~te~~sLTVTlvltlR 278 (330)
T KOG1583|consen 208 LF----LFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL-----LFNVLTQYFCIKGVYILTTETSSLTVTLVLTLR 278 (330)
T ss_pred hH----HHhcchHHHHHHHHhcCcceeccccCccccHHHHHH-----HHHHHHHHHHHHhhhhhhceecceEEEEeeeHH
Confidence 44 333221 11 01100 12233333 34455666666655 455667788899999
Q ss_pred HHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccC
Q 019098 289 VAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 289 pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
-.++.+++++.|+.+++++.|+|..+++.|.+++....
T Consensus 279 KFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~ 316 (330)
T KOG1583|consen 279 KFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW 316 (330)
T ss_pred HHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999987765433
No 34
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=1.9e-09 Score=93.64 Aligned_cols=251 Identities=14% Similarity=0.121 Sum_probs=176.3
Q ss_pred CHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCC--hhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhc-ccHH
Q 019098 39 SYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLK--FPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISN-LTPG 115 (346)
Q Consensus 39 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~-~~pi 115 (346)
+|.+..+.-.+.+.++-++...+ .+ |..+ .+.+...++.|++.++++...+.+.++.+.+.+.++.. ++-+
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~-~~-----p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLF-RQ-----PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hC-----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 56666665555555555544444 23 3344 37788888889999999999999999999999998864 6777
Q ss_pred HHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHH
Q 019098 116 FTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENL 195 (346)
Q Consensus 116 ~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~ 195 (346)
.+.+++.++++|--+.++ -.....++++.++|+.+-. .+++... +.+++.+...|....+++.+
T Consensus 85 g~sl~gv~~fgEW~~~~~--~~~G~~Al~liiiGv~lts-~~~~~~~-------------~~~~~~~~~kgi~~Ll~sti 148 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQ--KIIGFLALVLIIIGVILTS-YQDKKSD-------------KSSSKSNMKKGILALLISTI 148 (269)
T ss_pred HHHHHHHhhcCCCCCcch--HHHHHHHHHHHHHHHHHhc-ccccccc-------------ccccccchhhHHHHHHHHHH
Confidence 799999999999775442 1223558888899998776 2322111 11234566789999999999
Q ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019098 196 LISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHM 275 (346)
Q Consensus 196 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~ 275 (346)
.|..|.+..|.. +.+ +......+.+...+....+.... ....+ ....|.. +..|+ .-.++..++..+.+.
T Consensus 149 gy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~--~~~~~---~k~~~~n-il~G~-~w~ignl~~~is~~~ 218 (269)
T PF06800_consen 149 GYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFS--KKPFF---EKKSWKN-ILTGL-IWGIGNLFYLISAQK 218 (269)
T ss_pred HHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhcc--ccccc---ccchHHh-hHHHH-HHHHHHHHHHHhHHh
Confidence 999999997763 344 66666666555444444443332 11111 2223344 33454 334778889999999
Q ss_pred CCceeeeehhhHHHHHHHHHHHHHhcCCcchhh----hHHHHHHHHHHHH
Q 019098 276 KGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGS----VIGGVIICVGFYV 321 (346)
Q Consensus 276 ~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~----~iG~~li~~G~~~ 321 (346)
.+.+..=.+..+.++++.+.|+++++|+=+..+ .+|.++++.|..+
T Consensus 219 ~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 219 NGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred ccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999988664 4688888887654
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.28 E-value=1.2e-10 Score=103.11 Aligned_cols=133 Identities=19% Similarity=0.233 Sum_probs=111.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHH
Q 019098 8 KDGLLFTAMVVAECTNVGLNILFKLATNKGMS--YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSL 85 (346)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 85 (346)
.+.+|.+++++++++|+...+..|+.. ++.+ +..+..+++.++.+++.+.....++ .. ..+.+++...+..++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~---~~~~~~~~~~~~~~~ 199 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFLGP-NP---QALSLQWGALLYLGL 199 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhcCC-CC---CcchHHHHHHHHHHH
Confidence 457899999999999999999999985 4566 4455557899999888887665433 22 235567777788888
Q ss_pred HH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhh
Q 019098 86 IG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAM 151 (346)
Q Consensus 86 ~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~ 151 (346)
++ ..++.++++++++.+++.++.+.++.|+++.+++++++||+++.+ ++.|..+.+.|+.
T Consensus 200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 87 899999999999999999999999999999999999999999555 9999999999873
No 36
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.27 E-value=7.5e-12 Score=96.12 Aligned_cols=103 Identities=22% Similarity=0.342 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHH
Q 019098 45 FYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAII 123 (346)
Q Consensus 45 ~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~ 123 (346)
.+|++.+.+++..+...+++.++..+..+++.+.+.+..|.++ ..++.++++|+++.+ +.+.++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5799999999988877755512212334456667777778888 699999999999999 58889999999999999999
Q ss_pred HhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 124 FRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 124 ~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++|||++.+ ++.+++++++|+.++.
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIA 105 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHh
Confidence 999999555 9999999999999987
No 37
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.18 E-value=4.5e-08 Score=88.51 Aligned_cols=302 Identities=14% Similarity=0.099 Sum_probs=183.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH-HHHHHHHHHHhH-hhhhccC-CCCCCCCChhHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFY-SSATATLVLLLF-PFIFRSN-TASLPLLKFPVISRICLL 83 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-r~~~~~l~l~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (346)
++...|++.++++.++|++.+...|+. ++.+-..+ +. -..++.++.-.. ..+.-++ .......+.+.+...++.
T Consensus 3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 3 NAIILGIIWHLIGGASSGSFYAPFKKV--KKWSWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred chhHHHHHHHHHHHHHhhccccccccc--CCCchhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 356889999999999999999999995 44442221 11 111111111100 0010010 011122456677778888
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcc---cccccCcchhhhHHHHHhhhhhheeeecCC
Q 019098 84 SLIGSLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKL---ALRSLGTWAKIIGTVVSVSGAMLVVLYKGP 159 (346)
Q Consensus 84 g~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~---~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~ 159 (346)
|++-..++..++.++++.+.+.+..+ ..++-++..++..++++|=. +..+ ....+.|+++.++|+.+.. ..+.
T Consensus 80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s-~Ag~ 156 (345)
T PRK13499 80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVG-RAGQ 156 (345)
T ss_pred HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHH-Hhhh
Confidence 88889999999999999999999966 56889999999999988633 2221 4457889999999998887 3222
Q ss_pred CccCCCCcccccccCCCC-cCCchhHHHHHHHHHHHHHHHHHH-------HHHHHHHh-hCChHHHHHHHHHH---HHHH
Q 019098 160 TIISPSSTALQSLQWPLQ-STQSKWVMGGLLLLMENLLISVWY-------IIQTQIIK-LYPAEFVVTLLYCV---FATI 227 (346)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~l~~~~~~a~~~-------v~~~~~~~-~~~~~~~~~~~~~~---~~~i 227 (346)
..... ..+. .++.+...|..+++++++.++.|. ...+...+ +.+ +......+.. .+.+
T Consensus 157 ~k~~~---------~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 157 LKERK---------MGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGA 226 (345)
T ss_pred hcccc---------cccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHH
Confidence 11100 0000 234567789999999999999999 44443222 222 3332222222 3333
Q ss_pred HHH-HHHhh---ccCCCccC-ccCC-----hhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeee---hh-hHHHHHHH
Q 019098 228 ISA-PICFL---GESNLSAW-RLKP-----DIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAI---FK-PLSVAIAA 293 (346)
Q Consensus 228 ~~~-~~~~~---~~~~~~~~-~~~~-----~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~---~~-~~~pv~~~ 293 (346)
..- ....+ ..++.... .... ......-+..|+ .=.+++.+|..+.+..+...... +. .+..+++.
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist 305 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN 305 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence 333 22221 11111101 1111 112222233343 44567778888887776554443 44 78889999
Q ss_pred HHHHHHhcCCcc------hhhhHHHHHHHHHHHHHhccC
Q 019098 294 IMSFIFLGESLH------LGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 294 ~~~~~~~ge~~~------~~~~iG~~li~~G~~~~~~~~ 326 (346)
++|+ ++||.=+ ..-++|.+++++|..+...++
T Consensus 306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 9999 4999876 566789999999988876553
No 38
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.16 E-value=7.3e-10 Score=100.01 Aligned_cols=138 Identities=10% Similarity=0.094 Sum_probs=110.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc--cCChhHHHHHHHHHH
Q 019098 182 KWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWR--LKPDIELASIVYSAF 259 (346)
Q Consensus 182 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~~ 259 (346)
+...|..+.+.++++|+...+..|.. .+.+ +.+..+++..++.+.+.+......+ ..... ..+...+.. ...+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIFM-LAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHHH-HHHHH
Confidence 44579999999999999999999864 5666 8999999999998877776544321 11100 012223322 33566
Q ss_pred HHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 260 FGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+..+..+.++++++++.+++.++++.++.|++..++++++++|+++..+++|+++.+.|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999999999999999999999999987765
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.13 E-value=9.9e-10 Score=89.13 Aligned_cols=138 Identities=17% Similarity=0.245 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhC------ChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc---c-----C-ChhH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLY------PAEFVVTLLYCVFATIISAPICFLGESNLSAWR---L-----K-PDIE 250 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~-----~-~~~~ 250 (346)
|..+++.+.++.+++.+..|+..++. .++.+...+....+.+.+.|.+++.|....... . . +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988883 278899999999999999999888766331110 0 0 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 251 LASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 251 ~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
+..++..++ ....-....+..+++++|...++....+.+...+.+++++||++|..+++|.++.++|.+++.+
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 455555555 4456677888899999999999999999999999999999999999999999999999987653
No 40
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.13 E-value=5.5e-10 Score=92.04 Aligned_cols=264 Identities=13% Similarity=0.142 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHH
Q 019098 41 FVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTL 120 (346)
Q Consensus 41 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~ll 120 (346)
+.+.+.+.++..+-+..+-..+-. +.+..+.+.++..+++-+..-+.--.+++|.+....+++.+++.+.++..
T Consensus 38 flll~vQSlvcvv~l~iLk~l~~~------~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAyg 111 (309)
T COG5070 38 FLLLAVQSLVCVVGLLILKFLRLV------EFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYG 111 (309)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHh------heehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhh
Confidence 455566666665555544332222 23344444555666665555566668999999999999999999999999
Q ss_pred HHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHH
Q 019098 121 AIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVW 200 (346)
Q Consensus 121 a~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~ 200 (346)
-..++|.|+ +.....+-++.+..-+.-. .+|.+.. .......+.|++++....+..+.+
T Consensus 112 Evl~Fgg~v------tsl~l~SFilMvlSS~va~--w~D~q~~-------------~~~~~~lN~GY~Wm~~Nclssaaf 170 (309)
T COG5070 112 EVLFFGGRV------TSLELLSFILMVLSSVVAT--WGDQQAS-------------AFKAQILNPGYLWMFTNCLSSAAF 170 (309)
T ss_pred HHHHhcCcc------chhhHHHHHHHHHHHHHhc--cchhhHH-------------HHHhcccCCceEEEehhhHhHHHH
Confidence 999999999 4447777777776665544 2221110 111234557999999999999999
Q ss_pred HHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCC-CccCccC-ChhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 019098 201 YIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESN-LSAWRLK-PDIELASIVYSAFFGLTFSTVVHTFGLHMKG 277 (346)
Q Consensus 201 ~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~ 277 (346)
....|+..+-.+ .....++|.++.+...+....+++|+. +.....+ +.....++...|+ +++.-.++-.+.++.++
T Consensus 171 VL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~svgiSy~saWcvrVtS 249 (309)
T COG5070 171 VLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSVGISYCSAWCVRVTS 249 (309)
T ss_pred HHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHhhhhhccceeEeehh
Confidence 888887665221 256678999999988888887777662 2211111 2223445555565 55555667788899999
Q ss_pred ceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCCccc
Q 019098 278 PVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKANDEEG 332 (346)
Q Consensus 278 ~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~~~~ 332 (346)
.+..+.+..++-.-..+-|.+++||+.+...+..+.+-..+..++...+.+++++
T Consensus 250 STtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~ 304 (309)
T COG5070 250 STTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304 (309)
T ss_pred hhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988887777777665554433
No 41
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.12 E-value=2.5e-09 Score=95.87 Aligned_cols=133 Identities=16% Similarity=0.171 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHH
Q 019098 187 GLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFST 266 (346)
Q Consensus 187 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 266 (346)
..+.+.++++++...+..|+..++++ +. .++.....++...|....... ...|+..+. .+......+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 46788999999999999998877755 33 355556667777776554211 122332222 33334444555777889
Q ss_pred HHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 267 VVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 267 ~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
.++++++++.+++.++.+.+++|+++.+++++++||+++..+++|..+++.|+.+...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999987764
No 42
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.11 E-value=2e-10 Score=97.54 Aligned_cols=280 Identities=15% Similarity=0.159 Sum_probs=198.5
Q ss_pred HHHHHHHHHhcC---C-CHHHHHHHHHHHHHHHHHhHhhhhccC--CCCCCC--CChhHHHHHHHHHHHHHHHHHHHHHh
Q 019098 26 LNILFKLATNKG---M-SYFVFIFYSSATATLVLLLFPFIFRSN--TASLPL--LKFPVISRICLLSLIGSLLRILGYTG 97 (346)
Q Consensus 26 ~~~~~k~~~~~~---~-~~~~~~~~r~~~~~l~l~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~a 97 (346)
..+..|++++.. + .|..+++++.++...+...+-....+- ....|+ ++.+..+..+.+.+.-.+.-.+-++.
T Consensus 43 ~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlc 122 (347)
T KOG1442|consen 43 LVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLC 122 (347)
T ss_pred hhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhcccee
Confidence 445667766431 2 477778888887766665554333220 111122 44455666666666666666677789
Q ss_pred hcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCC
Q 019098 98 IAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQ 177 (346)
Q Consensus 98 l~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (346)
++|++++...+-.++..+|++++.++++|+|-+.. ...+..+.+.|-.+=+ +.+ .
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv----dqE---------------~ 177 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV----DQE---------------G 177 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc----ccc---------------c
Confidence 99999999999999999999999999999998554 5666666666654332 111 1
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCccC---ccCChhHHHH
Q 019098 178 STQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESNLSAW---RLKPDIELAS 253 (346)
Q Consensus 178 ~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~ 253 (346)
..+.-...|.+++..+.++-|+..+..|+...... .....+++.+..+.++.+|...+.++-...+ .......|..
T Consensus 178 ~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~ 257 (347)
T KOG1442|consen 178 STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWIL 257 (347)
T ss_pred ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHH
Confidence 12344568999999999999999999987655443 3455788999999999999877654421111 1224457777
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCCcc
Q 019098 254 IVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKANDEE 331 (346)
Q Consensus 254 ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~~~ 331 (346)
+...|+++..++|.. ..-+|.++|...++=....-..-.+++..+++|.-+..-|-|-.++++|-..+.+-|..+.+
T Consensus 258 mtLsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~ 334 (347)
T KOG1442|consen 258 MTLSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMR 334 (347)
T ss_pred HHHHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHH
Confidence 777787666555532 33578899999999999999999999999999999999999999999999888876554333
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.08 E-value=2.2e-09 Score=94.86 Aligned_cols=135 Identities=12% Similarity=0.124 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCC---ccCccCChh-HHHHHHHHHHHH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNL---SAWRLKPDI-ELASIVYSAFFG 261 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~-~~~~ll~~~~~~ 261 (346)
|..+.++++++|+...+..|. ..+.+ +.+..+++.+++++.+.+......... ..+...... .+..+...|++
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~- 79 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL- 79 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH-
Confidence 888999999999999999998 45566 899999999999887766554432210 111101112 23445555654
Q ss_pred HHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 262 LTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
....+.+++.++++++++.++.+.++.|+++.+++.+++||+++..+++|.++.+.|+.+..
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66889999999999999999999999999999999999999999999999999999987654
No 44
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.04 E-value=8.1e-09 Score=93.10 Aligned_cols=134 Identities=12% Similarity=0.049 Sum_probs=107.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG- 87 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 87 (346)
+..|.++.+.++++|+...+..|+.. ++.++...... ..++.+++.++...... . ...+...+...+..|+++
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~-~---~~~~~~~~~~~l~lgv~~t 219 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAG-AEHGPATVAIG-SLIAALIFVPIGALQAG-E---ALWHWSILPLGLAVAILST 219 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHHH-HHHHHHHHHHHHHHccC-c---ccCCHHHHHHHHHHHHHHH
Confidence 45689999999999999999999984 56777776544 45566666665544222 1 123445555566788888
Q ss_pred HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 88 SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.+.+.++++++++.+++.++++.++.|++..++++++++|+++. .+++|.++.+.|++...
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~------~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTL------IQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcH------HHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999944 49999999999998875
No 45
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.02 E-value=8.9e-09 Score=92.81 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG- 87 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 87 (346)
..+|.++.++++++|+...+..|+.- + -++.....++..++.+.+.++...... ... ...+.+.+...+..++++
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~i~~l~i~~s 223 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGE-RLT-ALPTLSGFLALGYLAVFGS 223 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCC-ccc-ccCCHHHHHHHHHHHHHHH
Confidence 45799999999999999999999973 2 345566778888888887776554322 211 112456677788888887
Q ss_pred HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 88 SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
...+.++++++++.+++.++++..+.|++++++++++++|+++ ..+++|.++.+.|+++..
T Consensus 224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t------~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLS------PIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCc------HHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999994 449999999999998875
No 46
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.8e-08 Score=84.52 Aligned_cols=260 Identities=12% Similarity=0.141 Sum_probs=190.1
Q ss_pred cCCCH--HHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccc
Q 019098 36 KGMSY--FVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLT 113 (346)
Q Consensus 36 ~~~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~ 113 (346)
+++.| +.+++.++.+=..+-++-+...+. ++ +..+ |+.+..++.+......+..-++.|.+-..-.++.++.
T Consensus 69 ~gfkp~GWylTlvQf~~Ysg~glie~~~~~~-k~--r~iP---~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccK 142 (367)
T KOG1582|consen 69 EGFKPFGWYLTLVQFLVYSGFGLIELQLIQT-KR--RVIP---WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCK 142 (367)
T ss_pred ccCcccchHHHHHHHHHHHhhhheEEEeecc-cc--eecc---hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhh
Confidence 35654 455666665544444433222111 11 1233 4455566666666677788899999888888888888
Q ss_pred HHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHH
Q 019098 114 PGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLME 193 (346)
Q Consensus 114 pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~ 193 (346)
-+-+++.+.++-+.|- .+.+.++..+..+|.++..+.+++ .+.+....|..+.-.+
T Consensus 143 liPVmiggifIqGkRY------~v~d~~aA~lm~lGli~FTLADs~------------------~sPNF~~~Gv~mIsgA 198 (367)
T KOG1582|consen 143 LIPVMIGGIFIQGKRY------GVHDYIAAMLMSLGLIWFTLADSQ------------------TSPNFNLIGVMMISGA 198 (367)
T ss_pred hhhhhheeeeeccccc------cHHHHHHHHHHHHHHHhhhhcccc------------------cCCCcceeeHHHHHHH
Confidence 8888888988877775 666999999999999998742221 2234455788888888
Q ss_pred HHHHHHHHHHHHHHHhhCC-hHHHHHHHHHHHHHHHHHHHHhhccCCCccCc---cCChhHHHHHHHHHHHHHHHHHHHH
Q 019098 194 NLLISVWYIIQTQIIKLYP-AEFVVTLLYCVFATIISAPICFLGESNLSAWR---LKPDIELASIVYSAFFGLTFSTVVH 269 (346)
Q Consensus 194 ~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~~~~ 269 (346)
-++.|.---++.+..+..+ +..++.++...+|.+.+...+...++-...|+ -++.......++.+. .+.++....
T Consensus 199 Ll~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~V 277 (367)
T KOG1582|consen 199 LLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFV 277 (367)
T ss_pred HHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHH
Confidence 8888888888888888765 46677888888888888777777766444442 123345566666665 556777778
Q ss_pred HHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccC
Q 019098 270 TFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 270 ~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
..-++..++..++.+....-.+++++++++|..++|....-|..+++.|+++-...|
T Consensus 278 LalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 278 LALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 888899999999999999999999999999999999999999999999999876655
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.01 E-value=9.4e-09 Score=94.66 Aligned_cols=138 Identities=14% Similarity=0.159 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCC--CCCCChhHHHHHHHHHHHH
Q 019098 10 GLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTAS--LPLLKFPVISRICLLSLIG 87 (346)
Q Consensus 10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~ 87 (346)
..|.++++.++++|+...+..|+...+.-++...+++..+++.+.+.+......++... ....... ....+..++..
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t 266 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIIT 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHH
Confidence 44788899999999999999999865433444666676666666655544443220111 0111222 22233344444
Q ss_pred HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 88 SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.+.+.++++++++.+++.+++..++.|++++++++++++|+++.+ +++|.++.+.|+.++.
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVM 327 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999999999999999555 9999999999999886
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.98 E-value=1.2e-08 Score=92.04 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGS 88 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 88 (346)
+..|.++++.++++|+...+..|+. .++.++..... ..+.+.+.+....... .. ...+.+.+...+..++...
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~l~~~~~~t~ 226 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLSPQ-PA--MVFSLPAIIKLLLAAAAMG 226 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHhcC-cc--ccCCHHHHHHHHHHHHHHH
Confidence 3568899999999999999999998 45677765432 2333333332233221 11 2345566666666665458
Q ss_pred HHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 89 LLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 89 ~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
+.+.++++++++.+++.++.+.++.|++..++++++++|+++.. +++|.++.+.|+++..
T Consensus 227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence 89999999999999999999999999999999999999999554 9999999999997775
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.97 E-value=1.3e-07 Score=84.89 Aligned_cols=277 Identities=16% Similarity=0.149 Sum_probs=150.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
.+..-|.+..+.++++.+....+-|+...+ .+. .-. +++ ....+..+++.| ..|.+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~---------------~~~-~~~~~~l~~~~W----~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSL---------------RAG-SGGRSYLRRPLW----WIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccc---------------ccc-chhhHHHhhHHH----HHHHH
Confidence 345778888899999888888888887432 110 000 000 000011122223 33444
Q ss_pred H-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 87 G-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 87 ~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
. .++..+-+.|+.+.|++..+++....-++.++++..++|||++.+ ++.|+.+++.|..++.. .++...+..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~-~~~~~~~~~ 131 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVI-FAPKEEPIH 131 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEE-eCCCCCCcC
Confidence 4 677788889999999999999999999999999999999999555 99999999999988773 333222110
Q ss_pred CcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHH-------HHHHHHhhccC
Q 019098 166 STALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATI-------ISAPICFLGES 238 (346)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~~~~~~~ 238 (346)
+. ++.. ..-.+..+ ..+...... +...+.....++..++ + ...........++. +...+.....+
T Consensus 132 t~--~~l~--~~~~~~~f-l~y~~~~~~-~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g 203 (300)
T PF05653_consen 132 TL--DELI--ALLSQPGF-LVYFILVLV-LILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISILIKLTFSG 203 (300)
T ss_pred CH--HHHH--HHhcCcce-ehhHHHHHH-HHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHHHHHHHhcC
Confidence 00 0000 00000001 111111111 1111211122221111 1 11000000011110 01011111111
Q ss_pred CCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHH-HHHHHHHHHHHhcCCc--chh----hhHH
Q 019098 239 NLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLS-VAIAAIMSFIFLGESL--HLG----SVIG 311 (346)
Q Consensus 239 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~-pv~~~~~~~~~~ge~~--~~~----~~iG 311 (346)
+ .++ ..+..|..++.. +.+......+.++|+++.+++.+..+.+.- ...+.+-|.++++|.- +.. ...|
T Consensus 204 ~-~~f--~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G 279 (300)
T PF05653_consen 204 D-NQF--TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCG 279 (300)
T ss_pred c-hhh--hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHH
Confidence 1 122 133344444333 335556667788899999999999888744 5566777888889753 443 3457
Q ss_pred HHHHHHHHHHHhccC
Q 019098 312 GVIICVGFYVVIWGK 326 (346)
Q Consensus 312 ~~li~~G~~~~~~~~ 326 (346)
..+++.|+++....|
T Consensus 280 ~~~ii~GV~lL~~~~ 294 (300)
T PF05653_consen 280 FLIIIIGVFLLSSSK 294 (300)
T ss_pred HHHHHHhhheeeccC
Confidence 888888888776543
No 50
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.96 E-value=1.8e-08 Score=78.51 Aligned_cols=122 Identities=19% Similarity=0.188 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHH
Q 019098 185 MGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTF 264 (346)
Q Consensus 185 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 264 (346)
.|+.+.+.+.++-+...++.|+..++.+ ..+.... . ...+ ... . .+ ...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~-~~~~----~~~-----~------~p---~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F-IAAL----LAF-----G------LA---LRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H-HHHH----HHH-----h------cc---HHHHHHHHHHHHH
Confidence 3788889999999999999999888765 2221111 0 0000 000 0 10 2257788889999
Q ss_pred HHHHHHHHhccCCceeeeehhhHHHHHHHHHHHH--HhcCCcchhhhHHHHHHHHHHHHHhccCC
Q 019098 265 STVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFI--FLGESLHLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 265 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~--~~ge~~~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
++.+|.+++++.+++.+..+....++...+.++. ++||++|..+++|+++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888877774 89999999999999999999999876444
No 51
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.92 E-value=1.5e-08 Score=82.11 Aligned_cols=214 Identities=15% Similarity=0.197 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccC
Q 019098 84 SLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIIS 163 (346)
Q Consensus 84 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~ 163 (346)
.++....++.|..|++..+++.++.+......|+.+++++.+|+|... .++.+.++++-|++++. +.+++
T Consensus 60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~------~kIlaailAI~GiVmia-y~DN~--- 129 (290)
T KOG4314|consen 60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMG------FKILAAILAIGGIVMIA-YADNE--- 129 (290)
T ss_pred EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhh------hhHHHHHHHhCcEEEEE-eccch---
Confidence 334467789999999999999999999999999999999999999944 49999999999999887 33332
Q ss_pred CCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--hHHHHHHHHHHHHHHHHH--HHHhhccCC
Q 019098 164 PSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP--AEFVVTLLYCVFATIISA--PICFLGESN 239 (346)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~~--~~~~~~~~~ 239 (346)
......|...+..++...|+|-+..|+...+.+ +....+....++..+... +..+.+. .
T Consensus 130 ----------------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T-~ 192 (290)
T KOG4314|consen 130 ----------------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFT-G 192 (290)
T ss_pred ----------------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHh-c
Confidence 234568999999999999999999999887654 222222222222222221 1111111 2
Q ss_pred CccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHH
Q 019098 240 LSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGF 319 (346)
Q Consensus 240 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~ 319 (346)
.+.|.......|..+...+.+.. .-.++.+.++..+.|...++-+.....-....+.++-+-..+.....|..+|+.|.
T Consensus 193 VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 193 VEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred hHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 22332112335666665555433 33456667888899999999888888888999988777788899999999999998
Q ss_pred HHHhcc
Q 019098 320 YVVIWG 325 (346)
Q Consensus 320 ~~~~~~ 325 (346)
.+....
T Consensus 272 iLiiiP 277 (290)
T KOG4314|consen 272 ILIIIP 277 (290)
T ss_pred Hheecc
Confidence 776543
No 52
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.83 E-value=3.6e-08 Score=85.15 Aligned_cols=211 Identities=10% Similarity=0.053 Sum_probs=125.1
Q ss_pred hhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccC-----CCCcccccccCCCC
Q 019098 103 PTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIIS-----PSSTALQSLQWPLQ 177 (346)
Q Consensus 103 ~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 177 (346)
........+..++++++..+.+.+||.+ ..++++.++...|++.....+.+.... .....+.+.+.+..
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~------~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~ 77 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVT------QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT 77 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeee------hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc
Confidence 3445566778888888888888888884 448888888888876543211100000 00000000000011
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHH-HHHHHHHHHHHHHHHHhhccCCC-ccCccCChhHHHHHH
Q 019098 178 STQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVV-TLLYCVFATIISAPICFLGESNL-SAWRLKPDIELASIV 255 (346)
Q Consensus 178 ~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ll 255 (346)
...++...|....+.+..+.+...+..++..++.+..... .......+.+.........+.+. ..+... ..+....
T Consensus 78 ~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 155 (222)
T TIGR00803 78 LMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPTAV 155 (222)
T ss_pred cccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCchHH
Confidence 1223556788888888888888888888876665422222 12222222222122112211111 111100 0011111
Q ss_pred HHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Q 019098 256 YSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYV 321 (346)
Q Consensus 256 ~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~ 321 (346)
+.-++...++..+....+++.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 222234556677788889999999999999999999999999999999999999999999998764
No 53
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.81 E-value=2.4e-08 Score=76.61 Aligned_cols=108 Identities=15% Similarity=0.292 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHH
Q 019098 220 LYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIF 299 (346)
Q Consensus 220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~ 299 (346)
++...+.+.............+.+.......+..++..|.++...++.++.++.++.++ .++.+..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 34445555555544443221111211122345566666776767899999999999995 88899999999999999999
Q ss_pred hcCCcchhhhHHHHHHHHHHHHHhccCCC
Q 019098 300 LGESLHLGSVIGGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 300 ~ge~~~~~~~iG~~li~~G~~~~~~~~~~ 328 (346)
++|+++..+++|.+++++|+.+..+.+.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999988875443
No 54
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.78 E-value=1.7e-07 Score=75.99 Aligned_cols=135 Identities=21% Similarity=0.326 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCC----------Chh
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNK------GMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLL----------KFP 75 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~----------~~~ 75 (346)
|.++++.+.++.+...+..|+.+.+ +.++.++..+....+.+++.+.....+. ....+.. ..+
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~ 79 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEG-PQLSSFFSEIFGEELSSDPN 79 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhHHHHhhhhhhcchHH
Confidence 4577888999999999999998865 7999999999999999999998777655 3311111 224
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 76 VISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 76 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
.+...+..|+++.+.+...+..++++++...++......+.+.++++++++|+++. .++.|+.+++.|+.+-
T Consensus 80 ~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~------~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 80 FIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITP------LQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCH------HHHHHHHHHHHHHhee
Confidence 45556666777799999999999999999999999999999999999999999954 4999999999998653
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.78 E-value=2.2e-07 Score=83.99 Aligned_cols=138 Identities=17% Similarity=0.176 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhHhhhhccCCC----CCCCCChhHHHHHHHH
Q 019098 10 GLLFTAMVVAECTNVGLNILFKLATNKGM--SYFVFIFYSSATATLVLLLFPFIFRSNTA----SLPLLKFPVISRICLL 83 (346)
Q Consensus 10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 83 (346)
..|.++++.++++|+...+..|+...++- +......+-.+.+.+.+......... .. .....+...+...+..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDG-SATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcC-chhhhhhhccCCHHHHHHHHHH
Confidence 47999999999999999999999743222 22233344444443333332222222 11 1123455678888888
Q ss_pred HHHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 84 SLIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 84 g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++++ ...+.+++.++++.+++.++.+..+.|++..++++++++|+++.. +++|..+.+.|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence 8888 899999999999999999999999999999999999999999554 9999999999998765
No 56
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=3.6e-09 Score=88.65 Aligned_cols=278 Identities=14% Similarity=0.092 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
.++..++-++.|+....++.+. +=.|.+....-.+.+.++-+.+.++ .+ |......+..-++.|++..+++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~~-----p~~T~~~~iv~~isG~~Ws~GQ 73 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-VS-----PELTLTIFIVGFISGAFWSFGQ 73 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-ec-----CccchhhHHHHHHhhhHhhhhh
Confidence 4566778888899999888776 4467877776666666555555444 33 4566777777778888889999
Q ss_pred HHHHHhhcccchhhhhhhhc-ccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCCCcccc
Q 019098 92 ILGYTGIAYSSPTLASMISN-LTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSSTALQ 170 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~-~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~ 170 (346)
...+.|+++.+++.+.++.. ++-+-+.+++.+.++|=.+..+ -.....++++.++|+.+-. .+++
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs-~~~~----------- 139 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTS-KQDR----------- 139 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEee-eecc-----------
Confidence 99999999999999998865 7788888999999999663331 1123456677777776665 2221
Q ss_pred cccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhH
Q 019098 171 SLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIE 250 (346)
Q Consensus 171 ~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 250 (346)
++.+.++.++...|....+.+.+.|-.|.+..+... .+ ..+....+.....+....+..... .... ....
T Consensus 140 --~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~-g~saiLPqAiGMv~~ali~~~~~~--~~~~---~K~t 209 (288)
T COG4975 140 --NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VD-GLSAILPQAIGMVIGALILGFFKM--EKRF---NKYT 209 (288)
T ss_pred --ccccccChHhhhhheeeeeeeccceeeeEeeecccc--cc-chhhhhHHHHHHHHHHHHHhhccc--ccch---HHHH
Confidence 122234456677899999999999999999887754 33 344444443333333322222211 1111 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhh----HHHHHHHHHHHHHhc
Q 019098 251 LASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSV----IGGVIICVGFYVVIW 324 (346)
Q Consensus 251 ~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~----iG~~li~~G~~~~~~ 324 (346)
|.. +..|+ .=..+..++..+.+..+.+..=.+..+..+++.+-|++++||+=|..++ +|.+++++|..+.-.
T Consensus 210 ~~n-ii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 210 WLN-IIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred HHH-HhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 333 33455 3347778888888899988888899999999999999999999998765 688888888765443
No 57
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.66 E-value=4.9e-07 Score=81.93 Aligned_cols=121 Identities=15% Similarity=0.187 Sum_probs=96.5
Q ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 019098 199 VWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGP 278 (346)
Q Consensus 199 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~ 278 (346)
.+++.+|...++.+.|......++..+.+...+........... .+..+|..++..|++ ....+.+.+.+++++++
T Consensus 16 ~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~ 91 (302)
T TIGR00817 16 YFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLK---ISSALLKLLLPVAIV-HTIGHVTSNVSLSKVAV 91 (302)
T ss_pred HHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHHHHH-HHHHHHHHHHHHHhccH
Confidence 34467788888766689999999988877665542111111111 134577888888886 46788999999999999
Q ss_pred eeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 279 VYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 279 ~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+..+++..+.|+++.+++.++++|+++..++.|.+++++|+.+..
T Consensus 92 s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 92 SFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999997653
No 58
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.61 E-value=6.5e-07 Score=77.56 Aligned_cols=138 Identities=14% Similarity=0.137 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCc-cCChhHHHHHHHHHHHHHH
Q 019098 185 MGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWR-LKPDIELASIVYSAFFGLT 263 (346)
Q Consensus 185 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~ 263 (346)
.|.++++.+.+.|+..-...|. .++.+ +.++..++.+.+................-+. ...+..+..+...+.+. .
T Consensus 7 ~Gil~~l~Ay~lwG~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li-~ 83 (293)
T COG2962 7 KGILLALLAYLLWGLLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI-G 83 (293)
T ss_pred chhHHHHHHHHHHHHHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-H
Confidence 5999999999999998777665 56676 7899999999888777666555433222221 22344566666666644 5
Q ss_pred HHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 264 FSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
..+..|.++.++....++|.-.+++|++.+++|.++++|+++..|++...+..+|+....+.
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998776543
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.60 E-value=2.1e-06 Score=79.24 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHH
Q 019098 184 VMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLT 263 (346)
Q Consensus 184 ~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~ 263 (346)
..-..+.+.=-.+...+....|...+..|-|..++.+++.++.+.+...........+... .....+..++..|++..
T Consensus 48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~- 125 (350)
T PTZ00343 48 WKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL- 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH-
Confidence 3344444444555566678889888887768999999999998766544322111111111 02236677777888554
Q ss_pred HHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 264 FSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
..+...+.++++.+++.++++..++|+++++++.++++|+++..++.|.+++++|+.+...
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 4466677999999999999999999999999999999999999999999999999987653
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.55 E-value=6.1e-07 Score=68.23 Aligned_cols=67 Identities=13% Similarity=0.048 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 257 SAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 257 ~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
.++++..+++.++..++++.+.+.+..+.++.++.+.+.|++++||+++..+++|.++|++|+.+..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445677899999999999999999999999999999999999999999999999999999987654
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.48 E-value=2.4e-06 Score=76.82 Aligned_cols=129 Identities=13% Similarity=0.036 Sum_probs=101.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH----HHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSA----TATLVLLLFPFIFRSNTASLPLLKFPVISRICLLS 84 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 84 (346)
..||++..++++++++......|.. +.+|.+..+.... .+.+++.+. ++ .+ + .+.+..+..+..|
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~--~-~~~~~~~~~~~~G 218 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH----IL-AK--P-LKKYAILLNILPG 218 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH----hc-cc--c-hHHHHHHHHHHHH
Confidence 3789999999999999999999976 4788888655555 333333332 12 11 2 2334445556688
Q ss_pred HHHHHHHHHHHHhhc-ccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhh----hHHHHHhhhhhhee
Q 019098 85 LIGSLLRILGYTGIA-YSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKI----IGTVVSVSGAMLVV 154 (346)
Q Consensus 85 ~~~~~~~~~~~~al~-~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~----~~i~l~~~Gv~~~~ 154 (346)
++....+.+|+.+.+ +.+++.+.++.+..|+...+.+.+++||+.+.+ ++ +|.++.+.|+.++.
T Consensus 219 i~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 219 LMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 888889999999999 999999999999999999999999999999666 88 99999999988765
No 62
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.46 E-value=3.9e-06 Score=71.09 Aligned_cols=138 Identities=13% Similarity=0.037 Sum_probs=114.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHH
Q 019098 5 NSYKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLS 84 (346)
Q Consensus 5 ~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 84 (346)
...-+..|..+.+.+..||+.+-+..|+.- +..+.-.-+..-++++.++.+|+...+.. .. -.++......+..+
T Consensus 142 ~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~ag-~~---l~~p~ll~laLgva 216 (292)
T COG5006 142 VWSLDPVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQAG-PA---LFSPSLLPLALGVA 216 (292)
T ss_pred cCcCCHHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhhcc-hh---hcChHHHHHHHHHH
Confidence 344567899999999999999999999984 35566666778888999999998765444 22 25666677778889
Q ss_pred HHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 85 LIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 85 ~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
+++ ++.+.+-..+++..|....+++.++.|.+.++.++++++|+++. .||.++...+.+..=.
T Consensus 217 vlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~------~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 217 VLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTL------IQWLAIAAVIAASAGS 280 (292)
T ss_pred HHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHHhcc
Confidence 999 99999999999999999999999999999999999999999944 4999998888776533
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.45 E-value=6e-06 Score=73.95 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-
Q 019098 10 GLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIF-YSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG- 87 (346)
Q Consensus 10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 87 (346)
..+.++.+.++++|+...+..|... ..++..... +.......+..+. .... .. .....+.+......|+++
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~--~~~~~~~~~~~~~~g~~~~ 225 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLF--FLSG-FG--APILSRAWLLLLYLGVFST 225 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHH--Hhcc-cc--ccCCHHHHHHHHHHHHHHH
Confidence 6899999999999999999999884 556666665 3333222222222 2111 11 234567788888889888
Q ss_pred HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 88 SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
...+.+++++++..+++..+.+..+.|++..++++++++|+++.+ +++|.++.+.|+.+..
T Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~ 286 (292)
T COG0697 226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999999999999555 9999999999998775
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.44 E-value=1.6e-06 Score=65.98 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=59.9
Q ss_pred HHHHHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 82 LLSLIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 82 ~~g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
..++++ ..+..++..++++.|.+.+..+.++.++++.+++++++|||++.+ +++|+.++++|++++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 334355 889999999999999999999999999999999999999999555 9999999999998875
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.30 E-value=2.6e-05 Score=70.75 Aligned_cols=142 Identities=15% Similarity=0.033 Sum_probs=110.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
.+..+|=++++.+++++|..++.-++.. ++.++.++..+-.+++.++..+.....+++.....+.+.+.....+..+++
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~ 242 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALC 242 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHH
Confidence 3568999999999999999999999886 578999999999999999888877666552221122333433333333444
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheee
Q 019098 87 GSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVL 155 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~ 155 (346)
....+.+.-..+++++|+...+=..+..++.+++..+++|+++ ++..++|.++.++|.++...
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~------~~ly~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKF------SWLYILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccc------cHHHHHHHHHHHHHhheEEc
Confidence 4666667788899999998888888899999999999999999 56699999999999988873
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.28 E-value=1.5e-05 Score=62.23 Aligned_cols=117 Identities=17% Similarity=0.222 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHH-HH
Q 019098 11 LLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIG-SL 89 (346)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 89 (346)
++++.++++.++-+...++.|..++ +.+..+.... . .. .+.. . . .....+..|+.. .+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~-~-~~--~~~~---~--~-----------~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWD-F-IA--ALLA---F--G-----------LALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhH-H-HH--HHHH---H--h-----------ccHHHHHHHHHHHHH
Confidence 3678888888888999999999974 3333322111 1 00 0000 0 0 011145667777 99
Q ss_pred HHHHHHHhhcccchhhhhhhhcccHHHHHHHHHH--HhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 90 LRILGYTGIAYSSPTLASMISNLTPGFTFTLAII--FRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 90 ~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~--~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
+..++.+++++.|++.+..+.+..+.++.+.++. ++||+++.+ +++|+++.++|++++.
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999889888885 899999555 9999999999999986
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=7.3e-06 Score=71.99 Aligned_cols=277 Identities=14% Similarity=0.135 Sum_probs=156.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
.+...|.+..+.+.+..+.+..+-|+...+ ... .-.+.+ ....+.+ +. +....|.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~------------------~~~ra~-~gg~~yl-~~---~~Ww~G~l 72 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA------------------SGLRAG-EGGYGYL-KE---PLWWAGML 72 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh------------------hccccc-CCCcchh-hh---HHHHHHHH
Confidence 456778888888888888888888887532 110 011111 2211222 22 22344666
Q ss_pred H-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheeeecCCCccCCC
Q 019098 87 G-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPS 165 (346)
Q Consensus 87 ~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~ 165 (346)
. .++...-|.|..+.|++..+++-.++-+..++++..+++||++.. ...|..++++|-.+++ ..++.+....
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV-~haP~e~~i~ 145 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIV-IHAPKEQEIE 145 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEE-EecCcccccc
Confidence 6 788888889999999999999999999999999999999999555 9999999999988887 3333322110
Q ss_pred CcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH----------Hhh
Q 019098 166 STALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPI----------CFL 235 (346)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~ 235 (346)
+.+.-+.... +..+ +.+...... ...+-....+. ++. ...+..+..+.+.+-+.-. -..
T Consensus 146 ---t~~el~~~~~-~~~F-liy~~~iil--~~~il~~~~~p---~~g-~tnilvyi~i~s~iGS~tV~svKalg~aiklt 214 (335)
T KOG2922|consen 146 ---SVEEVWELAT-EPGF-LVYVIIIIL--IVLILIFFYAP---RYG-QTNILVYIGICSLIGSLTVMSVKALGIAIKLT 214 (335)
T ss_pred ---cHHHHHHHhc-CccH-HHHHHHHHH--HHHHHheeecc---ccc-ccceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence 0000000000 0011 111111111 11111111111 111 1122233333333211110 011
Q ss_pred ccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhH-HHHHHHHHHHHHhcCCc--ch----hh
Q 019098 236 GESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPL-SVAIAAIMSFIFLGESL--HL----GS 308 (346)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~-~pv~~~~~~~~~~ge~~--~~----~~ 308 (346)
..+ ..+.. .+..|..++.+.. +...-....++|++..+++.++.+.+. -..++++-+.++|+|-- +. ..
T Consensus 215 ~~g-~~ql~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~ 290 (335)
T KOG2922|consen 215 FSG-NNQLF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGE 290 (335)
T ss_pred hcC-Ccccc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 111 11211 2345555554444 444555667899999999999988874 46677777889998843 33 34
Q ss_pred hHHHHHHHHHHHHHhccCCCC
Q 019098 309 VIGGVIICVGFYVVIWGKAND 329 (346)
Q Consensus 309 ~iG~~li~~G~~~~~~~~~~~ 329 (346)
..|...++.|+++....|..+
T Consensus 291 ~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 291 LCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHhHHHhhheeeEeeeecccc
Confidence 568888899988876554433
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.21 E-value=2.1e-05 Score=68.65 Aligned_cols=135 Identities=14% Similarity=0.043 Sum_probs=101.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLI 86 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 86 (346)
.+..|+++.++++++.++...++.|.. +.+++...+=....-.+.-.++.... + +..+.+..++-++.|++
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~-~-----~~~~~k~~~~nil~G~~ 204 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFS-K-----KPFFEKKSWKNILTGLI 204 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcc-c-----ccccccchHHhhHHHHH
Confidence 355789999999999999988887775 67888877655433333333332222 2 12333456667888999
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhh
Q 019098 87 GSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAML 152 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~ 152 (346)
...++.+++.+.+..+.+.+-.+.++.++...+-+.+++||+=+.|| -...++|+++.++|.++
T Consensus 205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999876664 34566677777777653
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.16 E-value=1.2e-05 Score=61.46 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHhccCCceeeeeh-hhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCC
Q 019098 258 AFFGLTFSTVVHTFGLHMKGPVYTAIF-KPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 258 ~~~~~~~~~~~~~~a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
.+.+..+++.++..++++++.+.+=.+ ..+..+.+.+.+++++||++|..+++|+.+|+.|+.......+
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 344567899999999999988765444 5688899999999999999999999999999999988765443
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.08 E-value=7.9e-05 Score=67.54 Aligned_cols=131 Identities=15% Similarity=0.182 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHhhCC-h--HHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 019098 197 ISVWYIIQTQIIKLYP-A--EFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGL 273 (346)
Q Consensus 197 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~ 273 (346)
+..+.+.++++.++.. . +..+++.+....++...+.......+. . +...+......++ ...++..+.+.++
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~-~~~~~~~~~~~al 85 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--S---RKIPLKKYAILSF-LFFLASVLSNAAL 85 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--C---CcChHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3345577787777643 3 567788888888887777655443111 1 1223334444454 5567888999999
Q ss_pred ccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCCcccc
Q 019098 274 HMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKANDEEGE 333 (346)
Q Consensus 274 ~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~~~~~ 333 (346)
++++.....+.....|+..++++.+++|++.+..++.+.+++.+|+.+....+.+++++.
T Consensus 86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~ 145 (303)
T PF08449_consen 86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS 145 (303)
T ss_pred HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence 999999999999999999999999999999999999999999999998887665444433
No 71
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.99 E-value=0.003 Score=56.61 Aligned_cols=303 Identities=13% Similarity=0.085 Sum_probs=186.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCC---CCCCCChhHHHHHHHH
Q 019098 7 YKDGLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTA---SLPLLKFPVISRICLL 83 (346)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 83 (346)
.+...|++...+.+++-++.++-.|+. ++.+-...=.....++.+++-.+.....- ++ .....+........+.
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~P~~~a~l~i-p~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIVPWLWALLAI-PDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHHHHHHHHHhC-CcHHHHHHhCChhHHHHHHHH
Confidence 456889999999999999999999998 57765555555555665554333222211 11 0122444567777888
Q ss_pred HHHHHHHHHHHHHhhcccchhhhh-hhhcccHHHHHHHHHHHhhhc--ccccccCcchhhhHHHHHhhhhhheeeecCCC
Q 019098 84 SLIGSLLRILGYTGIAYSSPTLAS-MISNLTPGFTFTLAIIFRMEK--LALRSLGTWAKIIGTVVSVSGAMLVVLYKGPT 160 (346)
Q Consensus 84 g~~~~~~~~~~~~al~~~~~~~~~-~i~~~~pi~~~lla~~~~~e~--~~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~ 160 (346)
|++-..+...|=.+++|+..+... +...+..++-.++-.++.++- + ..++-....+.|+++.++|+.+.. ..|..
T Consensus 80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g-~AG~~ 157 (344)
T PF06379_consen 80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICG-KAGSM 157 (344)
T ss_pred HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHh-HHHHh
Confidence 888888889999999999998887 556677777777767665421 1 111225678999999999999987 44422
Q ss_pred ccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH------hhCC-hHHH----HHHHHHHHHHHHH
Q 019098 161 IISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQII------KLYP-AEFV----VTLLYCVFATIIS 229 (346)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~------~~~~-~~~~----~~~~~~~~~~i~~ 229 (346)
-.. +..+...+.+...|.++++.+++..|..++-..... .+.. ++.. .....+..+.+.-
T Consensus 158 Ke~---------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 158 KEK---------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred hhh---------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 111 111122345667899999999999888876553211 1110 1222 2233344455555
Q ss_pred HHHHhhccC---CCc---cCccC-C--hhHHHHHHHHHHHHHHHHHHHHHHHhccCCce----eeeehhhHHHHHHHHHH
Q 019098 230 APICFLGES---NLS---AWRLK-P--DIELASIVYSAFFGLTFSTVVHTFGLHMKGPV----YTAIFKPLSVAIAAIMS 296 (346)
Q Consensus 230 ~~~~~~~~~---~~~---~~~~~-~--~~~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~----~~s~~~~~~pv~~~~~~ 296 (346)
...+++... +.. ..... + ..++...++.|+ .=...+++|-.+-.++++. .-.+.+.+..+++-++|
T Consensus 229 ~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwG 307 (344)
T PF06379_consen 229 LIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWG 307 (344)
T ss_pred HHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHH
Confidence 555544321 111 11110 1 123344444444 3346677777777777743 34467788889999999
Q ss_pred HHHhcCC------cchhhhHHHHHHHHHHHHHhcc
Q 019098 297 FIFLGES------LHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 297 ~~~~ge~------~~~~~~iG~~li~~G~~~~~~~ 325 (346)
++ ++|. .-...++|+++++.++.++-.+
T Consensus 308 l~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 308 LI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 65 6763 2344567888888887766443
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.89 E-value=9.7e-05 Score=55.82 Aligned_cols=68 Identities=19% Similarity=0.308 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhccCCceeeee-hhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccC
Q 019098 259 FFGLTFSTVVHTFGLHMKGPVYTAI-FKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~~s~-~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
+.+..+++.++..++++++.+.+=. ..-+..+.+.+.|++++||+++..+++|+.+|+.|+......+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4456788999999999988866543 3557888999999999999999999999999999999886543
No 73
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.83 E-value=3.9e-06 Score=71.58 Aligned_cols=137 Identities=15% Similarity=0.208 Sum_probs=94.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHH
Q 019098 182 KWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFG 261 (346)
Q Consensus 182 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 261 (346)
.-+.|..+...+ .++...+++.++..+..| .+....+.++-.+...|-.+..-.. .+ .+...=.++++=|+ .
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p--~e~a~~r~l~~mlit~pcliy~~~~--v~--gp~g~R~~LiLRg~-m 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLENDP--MELASFRLLVRMLITYPCLIYYMQP--VI--GPEGKRKWLILRGF-M 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccCh--hHhhhhhhhhehhhhheEEEEEeee--ee--cCCCcEEEEEeehh-h
Confidence 334677777777 778888888888777654 4444444443333333332221111 11 11111122333455 3
Q ss_pred HHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccC
Q 019098 262 LTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
+..+.+..++++++.+-+.+.++...+|+++.++++++++|+.|....+|..+.+.|+++..+..
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 34677788899999999999999999999999999999999999999999999999998877643
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.77 E-value=0.00063 Score=53.83 Aligned_cols=131 Identities=13% Similarity=0.116 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHH
Q 019098 187 GLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFST 266 (346)
Q Consensus 187 ~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 266 (346)
.++++.++..-+....+..++.++..++....+..+..+.+......++.++. .+......+|+..+ |-+.+..-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l--GG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL--GGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc--cHHHHHHHH
Confidence 56788888999999999999988877688999999999998888877766553 22211222333333 444555667
Q ss_pred HHHHHHhccCCceeeeehhh-HHHHHHHHHHHH----HhcCCcchhhhHHHHHHHHHHHH
Q 019098 267 VVHTFGLHMKGPVYTAIFKP-LSVAIAAIMSFI----FLGESLHLGSVIGGVIICVGFYV 321 (346)
Q Consensus 267 ~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~----~~ge~~~~~~~iG~~li~~G~~~ 321 (346)
.+.....++++++....+.. -+.+.+.+++.+ .-+++++..+++|.+++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77888899999987776555 566777888876 34578899999999999999863
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.76 E-value=0.00014 Score=65.38 Aligned_cols=120 Identities=18% Similarity=0.291 Sum_probs=87.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHH
Q 019098 181 SKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFF 260 (346)
Q Consensus 181 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 260 (346)
.++..|..+++.++++.+....++|+...+.+ ....-.- ......+ ..+.+|..++
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~~----------------~~~~~~l--~~~~W~~G~~----- 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRAG----------------SGGRSYL--RRPLWWIGLL----- 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccccc----------------chhhHHH--hhHHHHHHHH-----
Confidence 45678999999999999999999999877655 1000000 0000000 0122233322
Q ss_pred HHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 261 GLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
...++..+...++...+++.++.+..++.++..+++..++||+++..++.|+++++.|..+...
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 3345566777889999999999999999999999999999999999999999999999866544
No 76
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.72 E-value=0.00031 Score=63.85 Aligned_cols=146 Identities=12% Similarity=0.124 Sum_probs=95.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHH-HHHHHHHHHH-HHHhhccCCC-ccCccCChhHHHHHHHHH
Q 019098 182 KWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLL-YCVFATIISA-PICFLGESNL-SAWRLKPDIELASIVYSA 258 (346)
Q Consensus 182 ~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~~-~~~~~~~~~~-~~~~~~~~~~~~~ll~~~ 258 (346)
+...|++..++++++++-+.+-+|+ .++.+ .+.... ..++..++.. ..+.+..++. ..+...+...+..-...|
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 4567999999999999999999998 45444 222211 1111111111 1111212211 111112444555556666
Q ss_pred HHHHHHHHHHHHHHhccCCceeeeehhh-HHHHHHHHHHHHHhcCCc---c----hhhhHHHHHHHHHHHHHhccCCCCc
Q 019098 259 FFGLTFSTVVHTFGLHMKGPVYTAIFKP-LSVAIAAIMSFIFLGESL---H----LGSVIGGVIICVGFYVVIWGKANDE 330 (346)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~ge~~---~----~~~~iG~~li~~G~~~~~~~~~~~~ 330 (346)
++ =.+++..+..++++.+.++...+.. ++.+.+.+++.+++||-. + ....+|.+++++|+.+..+...+++
T Consensus 81 ~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~ 159 (345)
T PRK13499 81 AL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE 159 (345)
T ss_pred HH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 64 4589999999999999999887766 888999999999999765 3 2466799999999999887444333
Q ss_pred c
Q 019098 331 E 331 (346)
Q Consensus 331 ~ 331 (346)
+
T Consensus 160 ~ 160 (345)
T PRK13499 160 R 160 (345)
T ss_pred c
Confidence 3
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.66 E-value=0.00055 Score=51.52 Aligned_cols=67 Identities=13% Similarity=0.060 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 81 CLLSLIGSLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 81 ~~~g~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
...-++...+..+...++++.|.+.+..+ ....-+.+.+.+.+++||+++.. +++|+.+.+.|++.+
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 33333347888899999999999999855 56889999999999999999555 999999999999875
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.00029 Score=52.16 Aligned_cols=65 Identities=23% Similarity=0.327 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHhccCCcee-eeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 261 GLTFSTVVHTFGLHMKGPVY-TAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
+..++|.+...++|+++... .++..-...+.+.+.|+++|||+.+..+++|..++++|+......
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 45688999999999988743 467777888999999999999999999999999999999877654
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.58 E-value=0.0012 Score=49.73 Aligned_cols=63 Identities=14% Similarity=0.209 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhccCCcee-eeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 261 GLTFSTVVHTFGLHMKGPVY-TAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+..+++.+...++|+++... .++..-...+.+.+.+++++||+++..+++|..+|+.|+....
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 55688999999999988854 4566678889999999999999999999999999999988753
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.57 E-value=0.002 Score=50.99 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 13 FTAMVVAECTNVGLNILFKLATNKGMS-YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
++..+++.++-+....++.+.- +..+ |..-+++-+..+.+++..+....++ + ..++.+.. .++....|++++..-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~-~~~gs~~~as~i~~~~G~i~~~i~~~~~~~-~-~~~~~~~~-p~w~~lGG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLG-KALGSPLVASFISFGVGFILLLIILLITGR-P-SLASLSSV-PWWAYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHHhcc-c-ccchhccC-ChHHhccHHHHHHHH
Confidence 4556667777777777777773 4555 9999999999999999888877666 4 32334433 344555899999999
Q ss_pred HHHHHhhcccchhhhhhhhcc-cHHHHHHHHHH-H---hhhcccccccCcchhhhHHHHHhhhhhh
Q 019098 92 ILGYTGIAYSSPTLASMISNL-TPGFTFTLAII-F---RMEKLALRSLGTWAKIIGTVVSVSGAML 152 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~~-~pi~~~lla~~-~---~~e~~~~~~~~s~~~~~~i~l~~~Gv~~ 152 (346)
.+..+.....+++.+..+.-+ +-+...++-++ + -++++ ++.++.|+++.++|+.+
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~------~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF------SLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC------CHHHHHHHHHHHHHHhC
Confidence 999999999999999866554 44444455443 2 23445 66699999999999864
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.50 E-value=0.0007 Score=50.65 Aligned_cols=66 Identities=17% Similarity=0.208 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhccCCcee-eeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 259 FFGLTFSTVVHTFGLHMKGPVY-TAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~-~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
+.+..+++.+...++|+++... .++..-+..+.+.+.|++++||++++.+++|+.+|++|+.....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3355788999999999988754 45666788899999999999999999999999999999987643
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.47 E-value=0.0007 Score=51.89 Aligned_cols=64 Identities=22% Similarity=0.220 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++..++..++..++++.|.+.+..+ ....-+.+.+++.++++|+++.. +++|+.+.++|++.+-
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence 3338889999999999999999977 46899999999999999999555 9999999999998875
No 83
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.46 E-value=0.0004 Score=52.35 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 019098 17 VVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRILGYT 96 (346)
Q Consensus 17 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 96 (346)
++.+++||.++.+.|+.. ++.++..-.. |..-.... .+ .++ ++.+.-+++-.+...|++
T Consensus 2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~-----Ll----------~n~----~y~ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKF-----LL----------LNP----KYIIPFLLNQSGSVLFFL 60 (113)
T ss_pred eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHH-----HH----------HhH----HHHHHHHHHHHHHHHHHH
Confidence 345788999999999995 4554444331 22111111 00 111 133334455778889999
Q ss_pred hhcccchhhhhhhh-cccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 97 GIAYSSPTLASMIS-NLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 97 al~~~~~~~~~~i~-~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
.+...+.+.+.++. ++.=++|++.++++.+|.. ++..++|+.+.+.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~------~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVI------SRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCccc------chhHHHHHHHHHcCeeee
Confidence 99999999999885 7888999999987777766 444899999999998764
No 84
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.43 E-value=0.0017 Score=56.57 Aligned_cols=186 Identities=16% Similarity=0.059 Sum_probs=123.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLR 91 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 91 (346)
|+++++++++++|++++-.|+. +.-|++.+-++......+.-+++...++. ++ .+.+.++.|.+.+.++
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~~~-----p~----f~p~amlgG~lW~~gN 69 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLILGF-----PP----FYPWAMLGGALWATGN 69 (254)
T ss_pred CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhcCC-----Cc----ceeHHHhhhhhhhcCc
Confidence 4678999999999999999998 45688888888887777766665555333 22 2344566677779999
Q ss_pred HHHHHhhcccchhhhhhhhcccHHHHHHH-HHH-Hhhhcc--cccccCcchhhhHHHHHhhhhhheeeecCCCccCCCC-
Q 019098 92 ILGYTGIAYSSPTLASMISNLTPGFTFTL-AII-FRMEKL--ALRSLGTWAKIIGTVVSVSGAMLVVLYKGPTIISPSS- 166 (346)
Q Consensus 92 ~~~~~al~~~~~~~~~~i~~~~pi~~~ll-a~~-~~~e~~--~~~~~~s~~~~~~i~l~~~Gv~~~~~~~~~~~~~~~~- 166 (346)
.+-.-.++..+.+....+-++.-+++.-. +++ +++++. ..+ ++...+|+++.++|..+....+.+...+.++
T Consensus 70 ~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~---~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~ 146 (254)
T PF07857_consen 70 ILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSS---PWLNYIGVALVLVSGIIFSFIKSEEKEPKKSS 146 (254)
T ss_pred eeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccch---hHHHHHHHHHHHHHHHheeeecCCCCCccccc
Confidence 99999999999999998877655544433 222 343322 223 7889999999999998887544433111100
Q ss_pred c-----c--cccccCC-----CCc------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 019098 167 T-----A--LQSLQWP-----LQS------TQSKWVMGGLLLLMENLLISVWYIIQTQIIKLY 211 (346)
Q Consensus 167 ~-----~--~~~~~~~-----~~~------~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~ 211 (346)
+ . ..+..++ +.+ ...+...|..+++++++.|+...+=..+..++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 147 EETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 0 0 0000000 011 111356799999999999998887777765553
No 85
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.38 E-value=0.00061 Score=61.23 Aligned_cols=139 Identities=14% Similarity=0.176 Sum_probs=110.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHH-hHhhhhccCCC---CCCCCChhHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATN---KGMSYFVFIFYSSATATLVLL-LFPFIFRSNTA---SLPLLKFPVISRIC 81 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~~~~~~~~~~~~~~ 81 (346)
+..|...+..+.+..+.-.++.|..+. +.+|+++...+-.-++...++ |+......+.. .....+.. .....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 578899999999999999999999983 469999999998888888888 87665444122 11122223 33444
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 82 LLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 82 ~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
+.+++..+.+..-|..+..++|-..++.....-+++...++++++|+++.. +.+|.+++++|+.+-.
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence 455777888899999999999999999999999999999999999999444 9999999999997754
No 86
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.38 E-value=0.0046 Score=48.98 Aligned_cols=139 Identities=8% Similarity=0.105 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHH
Q 019098 185 MGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTF 264 (346)
Q Consensus 185 ~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 264 (346)
...++.+.++++-........++.+..++|....+..+..|++.+..+.++.+. ...+....+..|+... -|++ ..+
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~~~-GG~l-Ga~ 81 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWAWI-GGLL-GAI 81 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHHHH-ccch-hhh
Confidence 567788888999999999999988887778888999999998888887776433 3233222222333322 2222 222
Q ss_pred HHHHHHHHhccCCce-eeeehhhHHHHHHHHHHHHHhc----CCcchhhhHHHHHHHHHHHHHhccC
Q 019098 265 STVVHTFGLHMKGPV-YTAIFKPLSVAIAAIMSFIFLG----ESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 265 ~~~~~~~a~~~~~~~-~~s~~~~~~pv~~~~~~~~~~g----e~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
--........+++++ .......-+.+.+.+.|.+=+. .+++...++|++++++|+++.++++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 222233445666654 4445556677788888776554 6789999999999999966665543
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.00065 Score=50.33 Aligned_cols=62 Identities=18% Similarity=0.109 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 87 GSLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
...++.+.-.++++.|.+.+..+ .....+.+.+.++++++|+++.. +++++.+.++|++.+-
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 37888899999999999999855 77899999999999999999554 9999999999998763
No 88
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.25 E-value=0.0009 Score=58.43 Aligned_cols=79 Identities=11% Similarity=0.193 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019098 250 ELASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKAND 329 (346)
Q Consensus 250 ~~~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~ 329 (346)
+...+..-++ ...+...+.+.++++.+|+...++..++.+++++++++++|++++..||++..+.++|+.+........
T Consensus 16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3344444455 356778888999999999999999999999999999999999999999999999999999988766554
No 89
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.22 E-value=0.0028 Score=47.89 Aligned_cols=61 Identities=23% Similarity=0.220 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 88 SLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
..+..++..++++.|.+.+..+ ....-+.+.+.+++++||+++. .+++|+.+.++|++.+-
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~------~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDL------PAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCH------HHHHHHHHHHHHHHHHh
Confidence 7788888999999999999977 5689999999999999999954 49999999999998875
No 90
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.18 E-value=0.0036 Score=46.84 Aligned_cols=62 Identities=10% Similarity=-0.019 Sum_probs=54.8
Q ss_pred HHHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 87 GSLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
...+..+...++++.|.+.+..+ ....-+.+.+.+.+++||+++.. +++++.+.+.|++.+-
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 37888999999999999999865 55899999999999999999555 9999999999998763
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.17 E-value=0.0011 Score=48.68 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhccCCceee-eehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHH
Q 019098 259 FFGLTFSTVVHTFGLHMKGPVYT-AIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVII 315 (346)
Q Consensus 259 ~~~~~~~~~~~~~a~~~~~~~~~-s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li 315 (346)
+.+..+++.++.+++|+.+.+.+ ++..-+..+...+.|.+++||++|..+++|+.+|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33567889999999999998887 4556689999999999999999999999999876
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.16 E-value=0.00023 Score=60.32 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFS 265 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 265 (346)
..+++++=++.|+..-....+... .|.+-+.-..+.+.+....+.++. .+.. ....+..-+..|.+ =.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~GALifaiiv~~~~-~p~~-----T~~~~iv~~isG~~-Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTLGALIFAIIVFLFV-SPEL-----TLTIFIVGFISGAF-WSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccHHHHHHHHHHheee-cCcc-----chhhHHHHHHhhhH-hhhh
Confidence 566788888888886666555322 245544444444445444443332 2221 22233444444553 4488
Q ss_pred HHHHHHHhccCCceeeeehhh-HHHHHHHHHHHHHhcCCcchhhhH----HHHHHHHHHHHHhccCCC
Q 019098 266 TVVHTFGLHMKGPVYTAIFKP-LSVAIAAIMSFIFLGESLHLGSVI----GGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~ge~~~~~~~i----G~~li~~G~~~~~~~~~~ 328 (346)
+..++++++..+.+++..+.. .+.+-+.+++++.|+|..+..+++ ..++++.|+++..+.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~ 140 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRN 140 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccc
Confidence 999999999999999999877 677888999999999999987653 466777888877765543
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.88 E-value=0.014 Score=52.85 Aligned_cols=141 Identities=16% Similarity=0.135 Sum_probs=109.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHhHhhhhccC-CCCCCCCChhHHHHHHHH
Q 019098 8 KDGLLFTAMVVAECTNVGLNILFKLATNK---GMSYFVFIFYSSATATLVLLLFPFIFRSN-TASLPLLKFPVISRICLL 83 (346)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (346)
+...|-++.++++++++...+..|+-..+ .+|--.+--+-.++..++++|........ ..+.+-.+..+....++.
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 55889999999999999999999998643 36666666666777777777655544331 111122334556667788
Q ss_pred HHHH-HHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 84 SLIG-SLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 84 g~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++++ +++.++|..|.-.+++-.+++-.+++....++.-.++.+.++ |...++|.+..++|.+++.
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~------S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHP------SALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCC------CHHHHHHHHHHHHHHhhee
Confidence 8999 999999999999999999998888887777777777777777 6669999999999998887
No 94
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.84 E-value=0.05 Score=49.08 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC---hHHHHHHHHHHHHHHHHHHHHhhccCC--------CccCccCChhHHHHH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLYP---AEFVVTLLYCVFATIISAPICFLGESN--------LSAWRLKPDIELASI 254 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~l 254 (346)
=.+..+...+..+......|+..++.+ .+.+..+..-+.-.+.+....+..+.. ...+....+.+..-+
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 344445555666666666676555432 345555666666666666554443211 001111111111222
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCCcc
Q 019098 255 VYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKANDEE 331 (346)
Q Consensus 255 l~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~~~ 331 (346)
..-+. ...+-..+++.+..+.+|+...+...+....++++.+++++++.+..||...++...|+.+++.....+..
T Consensus 96 ~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~ 171 (345)
T KOG2234|consen 96 SVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG 171 (345)
T ss_pred HHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 22222 33455568999999999999999999999999999999999999999999999999999999955444333
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.75 E-value=0.011 Score=43.31 Aligned_cols=52 Identities=17% Similarity=0.092 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHHHhhhcccccccCcchhhhHHHH
Q 019098 88 SLLRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVV 145 (346)
Q Consensus 88 ~~~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l 145 (346)
..+..++..++++.|.+.+..+ ..+..+.+.+.+.+++||+++.+ ++.|+.+
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 7888999999999999999866 56999999999999999999665 9999876
No 96
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.58 E-value=0.067 Score=42.48 Aligned_cols=139 Identities=10% Similarity=-0.016 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHH
Q 019098 10 GLLFTAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSL 89 (346)
Q Consensus 10 ~~~~~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 89 (346)
...++..+.+.++-.....+.-++....=+|..-.++-+.++...+..+.....+ +.. .....+..++....|++++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~-~a~~~~~pwW~~~GG~lGa~ 81 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPG-LAAVASAPWWAWIGGLLGAI 81 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCc-hhhccCCchHHHHccchhhh
Confidence 4455666667777777777777774322359999999999999998888777444 333 22334556667778888877
Q ss_pred HHHHHHHhhcccchhhhhhh-hcccHHHHHHHHHH-HhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 90 LRILGYTGIAYSSPTLASMI-SNLTPGFTFTLAII-FRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 90 ~~~~~~~al~~~~~~~~~~i-~~~~pi~~~lla~~-~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
+-+.-........++....+ ..-+-+...++-.+ +++++.+. .+..++.|+++.++|+.++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~---~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRP---LNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCC---CCHHHHHHHHHHHHHHHHh
Confidence 77777777777777776644 44454555544443 23444333 3888999999999996554
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.20 E-value=0.02 Score=43.28 Aligned_cols=108 Identities=12% Similarity=0.082 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHH
Q 019098 192 MENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTF 271 (346)
Q Consensus 192 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 271 (346)
+.++.|+..+.+.|+..+..++...- . +..-.... ++ ..|.+++ .......+...|+.
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll-------------~n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LL-------------LNPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HH-------------HhHHHHH--HHHHHHHHHHHHHH
Confidence 34688999999999988876522221 1 21111111 10 0122222 22334567788899
Q ss_pred HhccCCceeeeeh-hhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHH
Q 019098 272 GLHMKGPVYTAIF-KPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYV 321 (346)
Q Consensus 272 a~~~~~~~~~s~~-~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~ 321 (346)
.+.+.+-+.+..+ +.+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 9999999999998 5899999999998888888888999999999999754
No 98
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.99 E-value=0.052 Score=46.70 Aligned_cols=65 Identities=12% Similarity=0.125 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhh
Q 019098 82 LLSLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAML 152 (346)
Q Consensus 82 ~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~ 152 (346)
...++++....+..+.++|.++...+....+.++++.+++.++++|+++.. ++.|+.+.+.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 344455777888999999999999999999999999999999999999554 99999999988753
No 99
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.68 E-value=0.1 Score=46.01 Aligned_cols=141 Identities=12% Similarity=0.029 Sum_probs=107.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhHhhhhccCCCC--CCCCChhHHHHHHHHH
Q 019098 8 KDGLLFTAMVVAECTNVGLNILFKLATNK-GMSYFVFIFYSSATATLVLLLFPFIFRSNTAS--LPLLKFPVISRICLLS 84 (346)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g 84 (346)
+...|++++...-.+=|..+..-...+.. .++++++.+.--+...+.-......++..... .-...++.++.+++.+
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence 56778887777776666666666666543 58999999998888888776664443331111 1123445677888999
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.++++++.+.|+-++.-++-.-+.+.-+-=++..+++.+.++.+++. .||.|+.+.+.|+.+=.
T Consensus 249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~------~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSS------EQWLGVLIVFGGIFLEI 312 (327)
T ss_pred HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccch------hhccCeeeehHHHHHHH
Confidence 99999999999999999888888888899999999999999999944 49999999888876543
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.29 E-value=0.0046 Score=54.74 Aligned_cols=121 Identities=18% Similarity=0.266 Sum_probs=86.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHH
Q 019098 180 QSKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAF 259 (346)
Q Consensus 180 ~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 259 (346)
..++..|..+++.+.+..+....+.|+..++.. . . ..-..+..-.+. ..+.+| .|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~--------------~~ra~~gg~~yl-~~~~Ww-----~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---S--------------GLRAGEGGYGYL-KEPLWW-----AGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---h--------------cccccCCCcchh-hhHHHH-----HHH
Confidence 345567999999999999999999888776543 1 0 000011111111 122233 444
Q ss_pred HHHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 260 FGLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 260 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
+...++-...+.+....+++.++.+..++.+.+++++..+++|+++....+|+++.++|-.....
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 45556666677777788999999999999999999999999999999999999999999655444
No 101
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.03 E-value=0.6 Score=41.71 Aligned_cols=121 Identities=13% Similarity=0.152 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhhCChHHH--HHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 019098 199 VWYIIQTQIIKLYPAEFV--VTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFSTVVHTFGLHMK 276 (346)
Q Consensus 199 ~~~v~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~a~~~~ 276 (346)
.-.+..|.....++-+.. ....|.+.+.+..........-+.++........|..+-.+- ....+.-.++++++
T Consensus 26 lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf----~~~i~t~~~slk~l 101 (314)
T KOG1444|consen 26 LMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLF----VGMLFTGSKSLKYL 101 (314)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHH----HHHHHHcccccccc
Confidence 344566777776663444 445888887776655543332233333322333443322211 23344556789999
Q ss_pred CceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHh
Q 019098 277 GPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVI 323 (346)
Q Consensus 277 ~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~ 323 (346)
+.....++...+|+++++....++|.+++...+.....+.+|.....
T Consensus 102 nVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 102 NVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred CchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999998876543
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.40 E-value=0.089 Score=44.65 Aligned_cols=138 Identities=15% Similarity=0.100 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCC---CCCChhHHHHHHHHHH
Q 019098 10 GLLFTAMVVAECTNVGLNILFKLATN-KGMSYFVFIFYSSATATLVLLLFPFIFRSNTASL---PLLKFPVISRICLLSL 85 (346)
Q Consensus 10 ~~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~ 85 (346)
..|-++++++-.+=|.....-.+.-. ..-+..++.+.-.+-+.+.+-.-.++.+. .... ..-.+..++.+.+.++
T Consensus 171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai 249 (337)
T KOG1580|consen 171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAI 249 (337)
T ss_pred chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHH
Confidence 45666666655555554444333211 11233444444444455544433333221 0000 0011245677888899
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 86 IGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 86 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++++++.+.|.-..+-+|-.-+++..+--.|+.+.+.++++.+++.| ||.|..+.+.|...=.
T Consensus 250 ~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 250 ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV 312 (337)
T ss_pred HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence 99999999999999999999999999999999999999999999666 9999999999876543
No 103
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=94.39 E-value=0.29 Score=44.25 Aligned_cols=148 Identities=13% Similarity=0.163 Sum_probs=88.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH--hhccCCCc-cCccCChhHHHHHHHH
Q 019098 181 SKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPIC--FLGESNLS-AWRLKPDIELASIVYS 257 (346)
Q Consensus 181 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~-~~~~~~~~~~~~ll~~ 257 (346)
++...|.++..+++++.+.+.+-.||. |+-+ -++.=..+.+++- +..|.. .+..++.. .+...+...+....+.
T Consensus 3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred chHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 456789999999999999999999985 3333 2222222333332 233332 22222211 1222233345555556
Q ss_pred HHHHHHHHHHHHHHHhccCCceeee-ehhhHHHHHHHHHHHHHhcC-------CcchhhhHHHHHHHHHHHHHhccCCCC
Q 019098 258 AFFGLTFSTVVHTFGLHMKGPVYTA-IFKPLSVAIAAIMSFIFLGE-------SLHLGSVIGGVIICVGFYVVIWGKAND 329 (346)
Q Consensus 258 ~~~~~~~~~~~~~~a~~~~~~~~~s-~~~~~~pv~~~~~~~~~~ge-------~~~~~~~iG~~li~~G~~~~~~~~~~~ 329 (346)
|++ =.++-..|-.++|+++.+... +..-+.-+++.++--++.|+ +-....++|.++.++|+.+.-+....+
T Consensus 80 G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 80 GVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 664 347777888999999886543 34446666666665555443 223466789999999998887765444
Q ss_pred ccc
Q 019098 330 EEG 332 (346)
Q Consensus 330 ~~~ 332 (346)
+++
T Consensus 159 e~~ 161 (344)
T PF06379_consen 159 EKE 161 (344)
T ss_pred hhh
Confidence 443
No 104
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.86 E-value=0.61 Score=39.46 Aligned_cols=137 Identities=13% Similarity=0.158 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCC---CCCCChhHHHHHHHHHHH
Q 019098 11 LLFTAMVVAECTNVGLNILFKLATN-KGMSYFVFIFYSSATATLVLLLFPFIFRSNTAS---LPLLKFPVISRICLLSLI 86 (346)
Q Consensus 11 ~~~~~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~ 86 (346)
-|++.|...++.-+......|+... .+..-++..++.-+.+.++++.+-..... ... ...++......+...|++
T Consensus 155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed-ws~~n~annl~~d~l~am~ISgl~ 233 (309)
T COG5070 155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGLC 233 (309)
T ss_pred CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc-CCcchhhcCCChHHHHHHHHHHHH
Confidence 3455555555545555555555432 35677888999999999999887666544 221 122444555567788888
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 87 GSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 87 ~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.+.-.+|..+.++-++.+..+.+-.+.-...++-+.++++|+.+.. .+.++.+++....+-.
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa 295 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA 295 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence 8888888999999999998888888888888899999999999555 8999999887766655
No 105
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.09 E-value=0.57 Score=40.96 Aligned_cols=130 Identities=9% Similarity=0.053 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHHHHH
Q 019098 186 GGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGLTFS 265 (346)
Q Consensus 186 G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 265 (346)
|.+.+++|.++++-..+=.|+.-.. | ......++.....+..+...++.+.+. .+ +..-. .|. .-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g-D-g~~fQw~~~~~i~~~g~~v~~~~~~p~-f~---p~aml-----gG~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG-D-GFFFQWVMCSGIFLVGLVVNLILGFPP-FY---PWAML-----GGA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC-C-cHHHHHHHHHHHHHHHHHHHHhcCCCc-ce---eHHHh-----hhh-hhhcC
Confidence 4566788888898888888875433 3 555555555555555544444432211 11 11111 111 11122
Q ss_pred HHHHHHHhccCCceeeee-hhhHHHHHHHHHHHH-HhcCCc-----chhhhHHHHHHHHHHHHHhccCC
Q 019098 266 TVVHTFGLHMKGPVYTAI-FKPLSVAIAAIMSFI-FLGESL-----HLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 266 ~~~~~~a~~~~~~~~~s~-~~~~~pv~~~~~~~~-~~ge~~-----~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
..+-.-.+|.++-...-. ....+.+.+...+.+ +||+.+ ...-++|++++++|..+...-|.
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence 222223333333322222 223456666666655 565433 34678999999999877665443
No 106
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.87 E-value=0.1 Score=43.08 Aligned_cols=62 Identities=11% Similarity=0.182 Sum_probs=56.5
Q ss_pred HHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 264 FSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
.+.+.|..+++.++|+.++.+..-+-.+..+++++++|+++...+++..++.+.|+++..+.
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~ 126 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA 126 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence 45678899999999999999999999999999999999999999999999999998876654
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=89.87 E-value=1.7 Score=32.00 Aligned_cols=111 Identities=21% Similarity=0.183 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------HHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHH
Q 019098 15 AMVVAECTNVGLNILFKLATNKGMS------YFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGS 88 (346)
Q Consensus 15 ~~l~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 88 (346)
.++....+||..+.+.|... .+.+ ...+.+.|-.... ..++++ ...-.++-
T Consensus 7 ~lvaVgllWG~Tnplirrgs-~g~~~v~~~~~k~~~~lqe~~tl------------------~l~w~Y----~iPFllNq 63 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGS-LGWDKVKSSSRKIMIALQEMKTL------------------FLNWEY----LIPFLLNQ 63 (125)
T ss_pred HHHHHHHHHccccHHHHHHH-hhHhhccCchHHHHHHHHHHHHH------------------HHhHHH----HHHHHHHH
Confidence 46667788999999999973 3332 2222222221110 122232 23334455
Q ss_pred HHHHHHHHhhcccchhhhhhhhc-ccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 89 LLRILGYTGIAYSSPTLASMISN-LTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 89 ~~~~~~~~al~~~~~~~~~~i~~-~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
++..+||.-++..+.+.+..+.+ +.-.|+.+.+.. ++|+.. .+..+.|..+.++|+.+.+
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~-----g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQ-----GGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccc-----cceeehhhhHHhhhhhhee
Confidence 66778899999999999997755 566777777765 577664 3448899999999987654
No 108
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=89.50 E-value=0.47 Score=41.58 Aligned_cols=65 Identities=12% Similarity=0.194 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 261 GLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
+-..+..+.+.++..++++....+.-.-.+|+.+++.-+++.+++..||+|+..+.+|++++-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 44456667778888999998889999999999999999999999999999999999998876543
No 109
>PRK02237 hypothetical protein; Provisional
Probab=87.66 E-value=3 Score=30.97 Aligned_cols=46 Identities=22% Similarity=0.265 Sum_probs=38.2
Q ss_pred eehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCC
Q 019098 282 AIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 282 s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
+...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..+
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 3455566788899999999999999999999999999987765543
No 110
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=86.70 E-value=7.1 Score=34.93 Aligned_cols=67 Identities=16% Similarity=0.265 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCC
Q 019098 261 GLTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 261 ~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
+++.=-.+-++++++++.+..++..+..++|-.+++.++-=|++++....-..+|-+|+++..++..
T Consensus 93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 5667778889999999999999999999999999999999999999999888899899888766543
No 111
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=84.83 E-value=1.5 Score=32.51 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=37.4
Q ss_pred ehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCC
Q 019098 283 IFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKA 327 (346)
Q Consensus 283 ~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~ 327 (346)
...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..|
T Consensus 62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 344455678899999999999999999999999999888766543
No 112
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=83.32 E-value=2.3 Score=37.28 Aligned_cols=139 Identities=16% Similarity=0.111 Sum_probs=96.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHhHhhhhccCCC---CCCCC-ChhHHHHHHHH
Q 019098 9 DGLLFTAMVVAECTNVGLNILFKLATNK-GMSYFVFIFYSSATATLVLLLFPFIFRSNTA---SLPLL-KFPVISRICLL 83 (346)
Q Consensus 9 ~~~~~~~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~ 83 (346)
...|.++-.++++.-+...+..|+.+.. +=.-+.++++..+.+.++++|.....+. -. ..++. ..+.|..+.+.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHHHHHHHHH
Confidence 4678899999999999999999987643 2346788999999999999998877654 21 11333 44556666677
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 84 SLIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 84 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
|+++..-++...+=++.++|-.-.+--......-.+++..+++|.. +...|-+-++...|-..-.
T Consensus 262 glfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~k------s~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 262 GLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETK------SGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHh------hhheeeeeEEEEehhHHHH
Confidence 7777555555556667676655544444555666788999999988 4447777666666654443
No 113
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=81.13 E-value=6 Score=29.24 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=47.0
Q ss_pred HHHHHHHHHhccCCceeeeehhh-HHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Q 019098 264 FSTVVHTFGLHMKGPVYTAIFKP-LSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVV 322 (346)
Q Consensus 264 ~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~ 322 (346)
.+..+|+.-+++.+-+.+..+.+ +.-+++...|...-.|......+.|..++++|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 55667777888888888776655 688899999987666667788889999999998653
No 114
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=80.73 E-value=0.12 Score=44.53 Aligned_cols=134 Identities=17% Similarity=0.223 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-CChHHHHHHHHHHHHHHHHHHHHhhccCCCccCccCChhHHHHHHHHHHHHH
Q 019098 184 VMGGLLLLMENLLISVWYIIQTQIIKL-YPAEFVVTLLYCVFATIISAPICFLGESNLSAWRLKPDIELASIVYSAFFGL 262 (346)
Q Consensus 184 ~~G~~~~l~~~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ 262 (346)
.+|..+.-.-.++-.........+.++ .+.|...++.....-++.-.|+.++.-+.. ...|-..+.++. .-
T Consensus 17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~-------~~~~~hYilla~-~D 88 (336)
T KOG2766|consen 17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYI-------KAKWRHYILLAF-VD 88 (336)
T ss_pred hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHH-------HHHHHHhhheeE-Ee
Confidence 344444433334444444445555555 344555566666666666666655542111 113334444444 34
Q ss_pred HHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhcc
Q 019098 263 TFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 263 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~ 325 (346)
+=+.++..+|.++++-+.+..+.....+.-.+++|++++.+-.+.++.|.++.++|+.+....
T Consensus 89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 456667778889999999999999999999999999999999999999999999998776543
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=75.85 E-value=3.1 Score=30.73 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.8
Q ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHH
Q 019098 293 AIMSFIFLGESLHLGSVIGGVIICVGFYVV 322 (346)
Q Consensus 293 ~~~~~~~~ge~~~~~~~iG~~li~~G~~~~ 322 (346)
..++.+++||++++....|.++++++++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456788999999999999999999887654
No 116
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.50 E-value=8.9 Score=27.89 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=28.1
Q ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHHhc
Q 019098 293 AIMSFIFLGESLHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 293 ~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~ 324 (346)
..++.+.++|++.+..+.|..+++.|+.+..+
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 45688999999999999999999999887654
No 117
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=74.05 E-value=17 Score=31.99 Aligned_cols=112 Identities=16% Similarity=0.129 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhHhhhhccCCCC-C---CCCChhHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 019098 37 GMSYFVFIFYSSATATLVLLLFPFIFRSNTAS-L---PLLKFPVISRICLLSLIGSLLRILGYTGIAYSSPTLASMISNL 112 (346)
Q Consensus 37 ~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~ 112 (346)
.-+..+++++...++.+++++.+..... -.. + .+-+.+.+...++.+..+.++......=++.-++..++.+...
T Consensus 217 ~~ss~EmvfySy~iG~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTa 295 (367)
T KOG1582|consen 217 PASSSEMVFYSYGIGFVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTA 295 (367)
T ss_pred CCCcceEEEeeecccHHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHh
Confidence 4567899999999999998877666443 211 0 1123445555566666655555555555566678888888888
Q ss_pred cHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhheee
Q 019098 113 TPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVVL 155 (346)
Q Consensus 113 ~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~~ 155 (346)
--..+.+++++++.++.+.+ ...+.++.+.|+++=.+
T Consensus 296 RKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 296 RKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 88999999999999999666 88899999999988773
No 118
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=68.93 E-value=70 Score=27.00 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccchhhh
Q 019098 74 FPVISRICLLSLIGSLLRILGYTGIAYSSPTLA 106 (346)
Q Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~ 106 (346)
++.+++.++.++...+.+...+......|+...
T Consensus 143 r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~in 175 (206)
T PF06570_consen 143 RPSWWKYILISVLAMVLWIVIFVLTSFLPPVIN 175 (206)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHccccCC
Confidence 344555555555555555555555555665543
No 119
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.72 E-value=14 Score=27.24 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=37.0
Q ss_pred eehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccC
Q 019098 282 AIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 282 s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
+...-.-.+.+.++.+++=|.+|+.+.++|.++.++|+.+.....
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 344556678889999999999999999999999999977666553
No 120
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=63.51 E-value=4.7 Score=24.47 Aligned_cols=6 Identities=17% Similarity=0.379 Sum_probs=2.7
Q ss_pred HHHHHh
Q 019098 318 GFYVVI 323 (346)
Q Consensus 318 G~~~~~ 323 (346)
|+.+++
T Consensus 22 Gl~IyQ 27 (49)
T PF11044_consen 22 GLSIYQ 27 (49)
T ss_pred HHHHHH
Confidence 444444
No 121
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=63.33 E-value=3.1 Score=32.69 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=16.9
Q ss_pred ccCCceeeeehhhHHHHHHHHHHHHHhc
Q 019098 274 HMKGPVYTAIFKPLSVAIAAIMSFIFLG 301 (346)
Q Consensus 274 ~~~~~~~~s~~~~~~pv~~~~~~~~~~g 301 (346)
..-+.-+.+.+.|+.|+++++++.+..+
T Consensus 70 ~EkslL~sA~LvYi~PL~~l~v~~~La~ 97 (150)
T COG3086 70 EEKSLLKSALLVYIFPLVGLFLGAILAQ 97 (150)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556667777777777666533
No 122
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=59.99 E-value=10 Score=33.46 Aligned_cols=69 Identities=19% Similarity=0.319 Sum_probs=58.2
Q ss_pred HHHHHHHHHhcc-CCceeeeehhhHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhccCCCCccc
Q 019098 264 FSTVVHTFGLHM-KGPVYTAIFKPLSVAIAAIMSFIFLGESLHLGSVIGGVIICVGFYVVIWGKANDEEG 332 (346)
Q Consensus 264 ~~~~~~~~a~~~-~~~~~~s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~~li~~G~~~~~~~~~~~~~~ 332 (346)
....+.+++++. ++....-++..-+++.++.+++++.|.+-+..|+....++-+|+++....+.++-+.
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 446677788875 666778889999999999999999999999999999999999999988776654443
No 123
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=58.84 E-value=1.5e+02 Score=27.45 Aligned_cols=22 Identities=14% Similarity=0.060 Sum_probs=11.9
Q ss_pred hhhHHHHHHHHHHHHHhccCCC
Q 019098 307 GSVIGGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 307 ~~~iG~~li~~G~~~~~~~~~~ 328 (346)
...+++++.+.++.+..+.+++
T Consensus 371 ~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 371 FYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3455666666666655444333
No 124
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=57.67 E-value=66 Score=23.34 Aligned_cols=65 Identities=14% Similarity=0.051 Sum_probs=32.2
Q ss_pred HHHhccCCceeeeehhhHHHHHHHHHHHHH---hcCC-cchhhhHHHHHHHHHHHHHhccCCCCccccc
Q 019098 270 TFGLHMKGPVYTAIFKPLSVAIAAIMSFIF---LGES-LHLGSVIGGVIICVGFYVVIWGKANDEEGEN 334 (346)
Q Consensus 270 ~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~---~ge~-~~~~~~iG~~li~~G~~~~~~~~~~~~~~~~ 334 (346)
..+++.++-...-.+-..+.+.++++|.+. .++. +-...|.|+..=+.+..+..-..+|++|..|
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~~~~e 90 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSKKYGE 90 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhhhcCc
Confidence 445555544444444445555555554442 2322 2223466776666666665555455444433
No 125
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=56.31 E-value=5.1 Score=35.74 Aligned_cols=113 Identities=15% Similarity=0.037 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCC-----C------CCCCChhHHHHHHHHH
Q 019098 16 MVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTA-----S------LPLLKFPVISRICLLS 84 (346)
Q Consensus 16 ~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~g 84 (346)
|+++.+|||+.....|.+- ++-...+...+-+.++.++..++..+.-.... . ....+++.....+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~-r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAE-RRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHH-hcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 4567788999999888883 33222334566666666555544333211011 0 0122344455556666
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhcccHHHHHHHHHHHhhhcc
Q 019098 85 LIGSLLRILGYTGIAYSSPTLASMISNLTPGFTFTLAIIFRMEKL 129 (346)
Q Consensus 85 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pi~~~lla~~~~~e~~ 129 (346)
++-.+++.+.-+|+.+.+.+.+-++.....+..-..-..++..|+
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfld~~~ 124 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFLDPKI 124 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeeccCCC
Confidence 666899999999999999998887765444443333344455555
No 126
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=56.12 E-value=6 Score=35.29 Aligned_cols=69 Identities=6% Similarity=0.079 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCceeeeehhh-HHHHHHHHHHHHHhcCCcc--hhhhHHHHHHHHHHHHH
Q 019098 252 ASIVYSAFFGLTFSTVVHTFGLHMKGPVYTAIFKP-LSVAIAAIMSFIFLGESLH--LGSVIGGVIICVGFYVV 322 (346)
Q Consensus 252 ~~ll~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~-~~pv~~~~~~~~~~ge~~~--~~~~iG~~li~~G~~~~ 322 (346)
...+.-|+ .--++.++..+++...+.+.+-++.. +..+++..+.++ ++.+.. .....|..++++++++-
T Consensus 73 ~~A~aGGv-vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lg 144 (336)
T PF07168_consen 73 LFAMAGGV-VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILG 144 (336)
T ss_pred HHHHHhhH-hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHH
Confidence 33333444 44588888899998888877766554 333445555554 344443 24556887777776653
No 127
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=55.92 E-value=2e+02 Score=27.74 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=24.0
Q ss_pred hhhHHHHHHHHHHHHH-hcCCcchhhhHHHHHHHHHHHHHhccCCCC
Q 019098 284 FKPLSVAIAAIMSFIF-LGESLHLGSVIGGVIICVGFYVVIWGKAND 329 (346)
Q Consensus 284 ~~~~~pv~~~~~~~~~-~ge~~~~~~~iG~~li~~G~~~~~~~~~~~ 329 (346)
....-++++.++..+. +...+ .....|.+++..|+.++.+.++++
T Consensus 394 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~~~ 439 (473)
T TIGR00905 394 KALIVGVIACVYSIWLLYAAGL-KYLLLGFILYAPGIIFYGRARKER 439 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344455555444333 33322 345568888888976665544433
No 128
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=55.71 E-value=2.2e+02 Score=28.56 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=16.3
Q ss_pred cchhhhHHHHHhhhhhhee
Q 019098 136 TWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 136 s~~~~~~i~l~~~Gv~~~~ 154 (346)
.+.+|+|.++...|..++.
T Consensus 237 ~~lD~IG~~L~~~Gl~LfL 255 (599)
T PF06609_consen 237 KELDWIGIFLFIAGLALFL 255 (599)
T ss_pred HHhhHHHHHHHHHHHHHHH
Confidence 5568999999999988776
No 129
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=55.62 E-value=9.6 Score=27.11 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=24.4
Q ss_pred CcchhhhHHHHHHHHHHHHHhccCCCCccccc
Q 019098 303 SLHLGSVIGGVIICVGFYVVIWGKANDEEGEN 334 (346)
Q Consensus 303 ~~~~~~~iG~~li~~G~~~~~~~~~~~~~~~~ 334 (346)
..++..++|..++++|..++..++.+++-.++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~Rd 35 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPEVSRD 35 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcchhhh
Confidence 46788899999999999888776666555444
No 130
>PRK02237 hypothetical protein; Provisional
Probab=54.31 E-value=53 Score=24.55 Aligned_cols=32 Identities=9% Similarity=0.178 Sum_probs=24.8
Q ss_pred HHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 117 TFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 117 ~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
..+-.+..-++|+ ++.+++|..++++|+.++.
T Consensus 73 Sl~W~w~vdg~~P------d~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 73 SLLWLWVVDGVRP------DRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred HHHHHHHhcCcCC------ChhHHHhHHHHHHhHHHhe
Confidence 3455566666766 6669999999999998886
No 131
>PF15102 TMEM154: TMEM154 protein family
Probab=53.47 E-value=12 Score=29.66 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHHhccCCCCccc
Q 019098 309 VIGGVIICVGFYVVIWGKANDEEG 332 (346)
Q Consensus 309 ~iG~~li~~G~~~~~~~~~~~~~~ 332 (346)
++++++++..++++.+.||++.|+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 344455555566666655555544
No 132
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=52.30 E-value=1.4e+02 Score=24.86 Aligned_cols=111 Identities=11% Similarity=0.121 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 019098 14 TAMVVAECTNVGLNILFKLATNKGMSYFVFIFYSSATATLVLLLFPFIFRSNTASLPLLKFPVISRICLLSLIGSLLRIL 93 (346)
Q Consensus 14 ~~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 93 (346)
+..-+.+++.|.+.++.+.+ ...+-......-.+.++.+.....+.++. +. .+-.+..+++.+.......+-+.+
T Consensus 103 l~lg~~aLlsgitaff~~nA--~~~GlItlll~a~vgGfamy~my~y~yr~-~a--d~sqr~~~~K~~lv~~~sm~lWi~ 177 (226)
T COG4858 103 LFLGAMALLSGITAFFQKNA--QVYGLITLLLTAVVGGFAMYIMYYYAYRM-RA--DNSQRPGTWKYLLVAVLSMLLWIA 177 (226)
T ss_pred HHHHHHHHHHHHHHHHhcCC--cchhHHHHHHHHHhhhHHHHHHHHHHHHh-hc--ccccCCchHHHHHHHHHHHHHHHH
Confidence 33344455577777777775 35555665555555555554444444433 22 112233455556655566677777
Q ss_pred HHHhhcccchhhhhhhhcccHHHHHHHHH------HHhhhccccc
Q 019098 94 GYTGIAYSSPTLASMISNLTPGFTFTLAI------IFRMEKLALR 132 (346)
Q Consensus 94 ~~~al~~~~~~~~~~i~~~~pi~~~lla~------~~~~e~~~~~ 132 (346)
.+.+-.+.|++.--.+ -|+...+++. +.+|+|.|.+
T Consensus 178 v~i~t~~lPtslN~~L---~pi~l~IiGav~lalRfylkkk~NIq 219 (226)
T COG4858 178 VMIATVFLPTSLNPQL---PPIALTIIGAVILALRFYLKKKKNIQ 219 (226)
T ss_pred HHHHHhhCCCcCCcCC---chHHHHHHHHHHHHHHHHHHHhhccc
Confidence 7788888877655433 3444444443 4456666554
No 133
>PRK11469 hypothetical protein; Provisional
Probab=49.35 E-value=14 Score=30.80 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=27.2
Q ss_pred eehhhHHHHHHHHHHHHHhcCCcchhhhHHH-HHHHHHHHHHh
Q 019098 282 AIFKPLSVAIAAIMSFIFLGESLHLGSVIGG-VIICVGFYVVI 323 (346)
Q Consensus 282 s~~~~~~pv~~~~~~~~~~ge~~~~~~~iG~-~li~~G~~~~~ 323 (346)
+.++...|..+...|..+-+-.+...+|+|. +++..|..+..
T Consensus 44 g~~q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 44 GAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345677888888887766555556677764 45556876655
No 134
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=48.75 E-value=71 Score=20.54 Aligned_cols=45 Identities=18% Similarity=0.462 Sum_probs=34.2
Q ss_pred hhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019098 139 KIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKL 210 (346)
Q Consensus 139 ~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~ 210 (346)
..+|..+.++|++++. .+|+ |....+++-...|......++..++
T Consensus 5 ~v~G~~lv~~Gii~~~-lPGp--------------------------G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLP-LPGP--------------------------GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhc-CCCC--------------------------cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6788999999998876 4443 6677777777888888887777654
No 135
>COG1971 Predicted membrane protein [Function unknown]
Probab=46.58 E-value=24 Score=29.31 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHHHHHhcCCcchhhhHH-HHHHHHHHHHHh
Q 019098 284 FKPLSVAIAAIMSFIFLGESLHLGSVIG-GVIICVGFYVVI 323 (346)
Q Consensus 284 ~~~~~pv~~~~~~~~~~ge~~~~~~~iG-~~li~~G~~~~~ 323 (346)
++...|+++...+.++-+-.-.+..|+| ..+++.|+....
T Consensus 46 f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~ 86 (190)
T COG1971 46 FQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMII 86 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888777776544445667776 555668876544
No 136
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=44.76 E-value=1.7e+02 Score=23.73 Aligned_cols=54 Identities=15% Similarity=0.101 Sum_probs=35.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CChHHHHHHHHHHHHHHHHHHHHh
Q 019098 181 SKWVMGGLLLLMENLLISVWYIIQTQIIKL-----YPAEFVVTLLYCVFATIISAPICF 234 (346)
Q Consensus 181 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~ 234 (346)
.+........+.+++.|++-.++.....+| .|.|..-..+.++.+.++++.++-
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFmg 186 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFMG 186 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHcC
Confidence 445667788888888999888887666554 334444555666666666655543
No 137
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=43.35 E-value=2.9e+02 Score=26.13 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHH---HHhccCCceeeeehhhHHHHHHHHHHHHHhcCCc---------------chhhhHHHHHHH
Q 019098 255 VYSAFFGLTFSTVVHT---FGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGESL---------------HLGSVIGGVIIC 316 (346)
Q Consensus 255 l~~~~~~~~~~~~~~~---~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge~~---------------~~~~~iG~~li~ 316 (346)
+..|++++.+++.... +-.+.-++..+-.+--..=+++.+..-++-.+.. =..|++|++.++
T Consensus 283 ~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa~~~~~~~~~g~~~~~~~~~l~~Ql~g~~~~~ 362 (403)
T TIGR00836 283 IIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFAAPKVGGVGTGGLLGGNGKQLGVQLIGIAAII 362 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhcccccccccCCccccCcHHHHHHHHHHHHHHH
Confidence 3455555555555443 2345566666655555555555555544433211 124888877764
No 138
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=43.06 E-value=23 Score=26.24 Aligned_cols=33 Identities=6% Similarity=0.104 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 115 GFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 115 i~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
...+.++.+++||++++. .+.|-++.+.++..+
T Consensus 74 ~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred heeHHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 334567788999999665 888887776666543
No 139
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=42.98 E-value=8 Score=34.03 Aligned_cols=29 Identities=7% Similarity=0.150 Sum_probs=0.0
Q ss_pred cchhhhhhhhcccHHHHHHHH-HHHhhhcc
Q 019098 101 SSPTLASMISNLTPGFTFTLA-IIFRMEKL 129 (346)
Q Consensus 101 ~~~~~~~~i~~~~pi~~~lla-~~~~~e~~ 129 (346)
.+-+...++++...+.+.++- .+++|+|+
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrL 76 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRL 76 (381)
T ss_dssp ------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444455555444443333 33445554
No 140
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=41.26 E-value=27 Score=29.61 Aligned_cols=45 Identities=13% Similarity=0.333 Sum_probs=27.3
Q ss_pred eeeeehhhHHHHHHHHHHHHHhcCCcc-hhhhHH-HHHHHHHHHHHh
Q 019098 279 VYTAIFKPLSVAIAAIMSFIFLGESLH-LGSVIG-GVIICVGFYVVI 323 (346)
Q Consensus 279 ~~~s~~~~~~pv~~~~~~~~~~ge~~~-~~~~iG-~~li~~G~~~~~ 323 (346)
...+.+....|..+..+|..+-+-.+. ..+++| .+++..|.....
T Consensus 34 l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 34 LIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 344455556777777777766554434 356665 556667876553
No 141
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=39.62 E-value=11 Score=30.25 Aligned_cols=9 Identities=0% Similarity=0.279 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 019098 287 LSVAIAAIM 295 (346)
Q Consensus 287 ~~pv~~~~~ 295 (346)
+-|+++++.
T Consensus 83 llPLl~li~ 91 (154)
T PRK10862 83 MTPLVGLFL 91 (154)
T ss_pred HHHHHHHHH
Confidence 344444443
No 142
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.54 E-value=41 Score=25.05 Aligned_cols=36 Identities=8% Similarity=0.094 Sum_probs=26.9
Q ss_pred cHHHHHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhee
Q 019098 113 TPGFTFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 113 ~pi~~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
..+...+-.+..-|+|+ ++.+++|..++++|+.++.
T Consensus 67 fI~~Sl~W~w~vdg~~P------d~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 67 FIVASLLWGWLVDGVRP------DRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred HHHHHHHHHhhhcCcCC------ChHHHHhHHHHHHhHHheE
Confidence 33444555566666766 6679999999999999987
No 143
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=36.10 E-value=12 Score=29.21 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=8.9
Q ss_pred eehhhHHHHHHHHHHHH
Q 019098 282 AIFKPLSVAIAAIMSFI 298 (346)
Q Consensus 282 s~~~~~~pv~~~~~~~~ 298 (346)
+.+.|.-|+++++.+.+
T Consensus 71 a~l~Y~lPll~li~g~~ 87 (135)
T PF04246_consen 71 AFLVYLLPLLALIAGAV 87 (135)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445556655555544
No 144
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.93 E-value=49 Score=24.16 Aligned_cols=31 Identities=6% Similarity=0.210 Sum_probs=23.9
Q ss_pred HHHHHHHHhhhcccccccCcchhhhHHHHHhhhhhhe
Q 019098 117 TFTLAIIFRMEKLALRSLGTWAKIIGTVVSVSGAMLV 153 (346)
Q Consensus 117 ~~lla~~~~~e~~~~~~~~s~~~~~~i~l~~~Gv~~~ 153 (346)
-+.++.+++||++++. .+.+-.+...|+..+
T Consensus 83 Fv~Fsvfyl~epl~~~------~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWN------YLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHH------HHHHHHHHHHHHHHh
Confidence 3467889999999665 888888877777655
No 145
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=33.53 E-value=60 Score=21.89 Aligned_cols=18 Identities=11% Similarity=-0.042 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHHhcc
Q 019098 308 SVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 308 ~~iG~~li~~G~~~~~~~ 325 (346)
-.++++++++|+.++-..
T Consensus 6 iLi~ICVaii~lIlY~iY 23 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456777777787665543
No 146
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=33.39 E-value=5.3e+02 Score=26.77 Aligned_cols=112 Identities=9% Similarity=-0.041 Sum_probs=53.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhHhhhhccCCCCCC-CC-ChhHHHHHHHHHHHH-HHHHHHHHHhhc------cc----chh
Q 019098 38 MSYFVFIFYSSATATLVLLLFPFIFRSNTASLP-LL-KFPVISRICLLSLIG-SLLRILGYTGIA------YS----SPT 104 (346)
Q Consensus 38 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~g~~~-~~~~~~~~~al~------~~----~~~ 104 (346)
++|.++.+.-.+.-...+.. .+-...+.+.| +. -.+.+......|... ......+++++. .. +..
T Consensus 625 l~~~~il~~~l~~d~~~~~l--~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (755)
T TIGR01647 625 FPPIMVVIIAILNDGTIMTI--AYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHG 702 (755)
T ss_pred hhHHHHHHHHHHHhHhHhhc--cCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHh
Confidence 78888888877766532211 11111011101 11 113344455666666 444455555553 11 122
Q ss_pred hhhhhhcccHHHHHHHHHHHh-hhcccccccCcchhhhHHHHHhhhhh
Q 019098 105 LASMISNLTPGFTFTLAIIFR-MEKLALRSLGTWAKIIGTVVSVSGAM 151 (346)
Q Consensus 105 ~~~~i~~~~pi~~~lla~~~~-~e~~~~~~~~s~~~~~~i~l~~~Gv~ 151 (346)
.+.....+.-+++-.+..+.. .++..++++|++.-.++.+...+-..
T Consensus 703 ~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~ 750 (755)
T TIGR01647 703 NLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIAT 750 (755)
T ss_pred hhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHH
Confidence 333333444444444444333 45666666677777666666655443
No 147
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=33.02 E-value=3e+02 Score=23.13 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCcchhhhHHHHHHH--HHHHHHhccC
Q 019098 293 AIMSFIFLGESLHLGSVIGGVIIC--VGFYVVIWGK 326 (346)
Q Consensus 293 ~~~~~~~~ge~~~~~~~iG~~li~--~G~~~~~~~~ 326 (346)
-.+|..++++..-+.++.|.++.+ +|.....+++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~~ 168 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARRE 168 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 445777888888888888877764 4555544443
No 148
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=33.01 E-value=74 Score=17.77 Aligned_cols=14 Identities=21% Similarity=0.427 Sum_probs=6.9
Q ss_pred chhhhHHHHHHHHH
Q 019098 305 HLGSVIGGVIICVG 318 (346)
Q Consensus 305 ~~~~~iG~~li~~G 318 (346)
....++|.+++..+
T Consensus 11 ~~~~~~G~~l~~~~ 24 (34)
T TIGR01167 11 SLLLLLGLLLLGLG 24 (34)
T ss_pred HHHHHHHHHHHHHH
Confidence 34455666444443
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=32.70 E-value=4.6e+02 Score=25.29 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=8.1
Q ss_pred hhHHHHHHHHHHHHHh
Q 019098 308 SVIGGVIICVGFYVVI 323 (346)
Q Consensus 308 ~~iG~~li~~G~~~~~ 323 (346)
..+..++.+.|+.+..
T Consensus 385 f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 385 YLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555654443
No 150
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=32.59 E-value=2.1e+02 Score=27.59 Aligned_cols=22 Identities=9% Similarity=0.194 Sum_probs=18.1
Q ss_pred cchhhhHHHHHHHHHHHHHhcc
Q 019098 304 LHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 304 ~~~~~~iG~~li~~G~~~~~~~ 325 (346)
++..|++.+.++++|+++..+.
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999998666543
No 151
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=32.40 E-value=14 Score=28.28 Aligned_cols=17 Identities=6% Similarity=0.010 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 019098 252 ASIVYSAFFGLTFSTVV 268 (346)
Q Consensus 252 ~~ll~~~~~~~~~~~~~ 268 (346)
..++..|+..+.++|.+
T Consensus 57 ~vili~GvvvT~vays~ 73 (129)
T PF15099_consen 57 VVILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHHhhHhheeeEee
Confidence 34556677677776654
No 152
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=32.10 E-value=19 Score=23.73 Aligned_cols=16 Identities=44% Similarity=0.686 Sum_probs=13.1
Q ss_pred hhhHHHHHhhhhhhee
Q 019098 139 KIIGTVVSVSGAMLVV 154 (346)
Q Consensus 139 ~~~~i~l~~~Gv~~~~ 154 (346)
+++|+++.+.|++++.
T Consensus 1 kiigi~Llv~GivLl~ 16 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLY 16 (59)
T ss_pred CeeeehHHHHHHHHHH
Confidence 3678889999998886
No 153
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=31.93 E-value=1.7e+02 Score=23.54 Aligned_cols=77 Identities=19% Similarity=0.243 Sum_probs=49.8
Q ss_pred hhhHHHHHhhhhhheeeecCCCccCCCCcccccccCCCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--hHHH
Q 019098 139 KIIGTVVSVSGAMLVVLYKGPTIISPSSTALQSLQWPLQSTQSKWVMGGLLLLMENLLISVWYIIQTQIIKLYP--AEFV 216 (346)
Q Consensus 139 ~~~~i~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~--~~~~ 216 (346)
.-.++..+++|.=++.+.+-- .+.++..+|.+|..+.+.+-+..+......-.+.++.- ...+
T Consensus 91 ~slAVV~AIFGLElLmvSQvc---------------Ed~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~GFT 155 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVC---------------EDAHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLIGFT 155 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHH---------------hcchhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhhhhH
Confidence 456777888887666532211 11345678999999999998877776666566555543 3456
Q ss_pred HHHHHHHHHHHHHH
Q 019098 217 VTLLYCVFATIISA 230 (346)
Q Consensus 217 ~~~~~~~~~~i~~~ 230 (346)
.++|--+.++.+..
T Consensus 156 L~fWCeFtAsFLfF 169 (184)
T PF15108_consen 156 LMFWCEFTASFLFF 169 (184)
T ss_pred HHHHHHHHHHHHHH
Confidence 67777766665443
No 154
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=30.28 E-value=43 Score=20.10 Aligned_cols=19 Identities=26% Similarity=0.784 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHhccCCC
Q 019098 310 IGGVIICVGFYVVIWGKAN 328 (346)
Q Consensus 310 iG~~li~~G~~~~~~~~~~ 328 (346)
+|.++++.+++++.+++++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 3555666676666555443
No 155
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=30.25 E-value=1.5e+02 Score=24.98 Aligned_cols=22 Identities=0% Similarity=-0.155 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 019098 12 LFTAMVVAECTNVGLNILFKLA 33 (346)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~k~~ 33 (346)
|++..++.++..|.......+.
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~ 133 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKY 133 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666555544444433
No 156
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=28.43 E-value=47 Score=29.45 Aligned_cols=21 Identities=29% Similarity=0.608 Sum_probs=17.5
Q ss_pred cchhhhHHHHHHHHHHHHHhc
Q 019098 304 LHLGSVIGGVIICVGFYVVIW 324 (346)
Q Consensus 304 ~~~~~~iG~~li~~G~~~~~~ 324 (346)
+|..|+++..+++.|+.+..+
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~ 255 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIY 255 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999876543
No 157
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=28.02 E-value=4e+02 Score=23.08 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019098 181 SKWVMGGLLLLMENLLISVWYIIQTQIIKLYPAEFVVTLLYCVFATIISA 230 (346)
Q Consensus 181 ~~~~~G~~~~l~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 230 (346)
+...+|....+.-.+.....+.+.+... ++.....+...++++...
T Consensus 37 nalgmGlA~~~Vl~~S~~~~sllr~~i~----~~lRi~v~IlvIA~~V~~ 82 (231)
T PRK12405 37 NALGLGLATTLVLVCSNLTVSLLRKWIP----KEIRIPIFVMIIASFVTV 82 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHH
Confidence 3344555555555555444444444433 344555555555544333
No 158
>COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) [Signal transduction mechanisms]
Probab=27.39 E-value=3.4e+02 Score=22.03 Aligned_cols=61 Identities=16% Similarity=0.039 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhccCCceeeeehhhHHHHHHHHHHHHHhcC-CcchhhhHHHHHHHHHHHHH
Q 019098 262 LTFSTVVHTFGLHMKGPVYTAIFKPLSVAIAAIMSFIFLGE-SLHLGSVIGGVIICVGFYVV 322 (346)
Q Consensus 262 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~~~~~~~~ge-~~~~~~~iG~~li~~G~~~~ 322 (346)
+.-++..|.+.-....+-....+..++-+....++.+++++ ++....++|+.+-++...+.
T Consensus 61 ~iSa~lvW~~~~~~~~~~~~~~ly~~ql~ln~awspiff~l~~l~~a~i~~lll~~~vl~l~ 122 (161)
T COG3476 61 GISAYLVWEKGPGQGTSWLLMFLYLLQLILNFAWSPIFFGLRSLGAALIIILLLWIAVLVLT 122 (161)
T ss_pred HHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHH
Confidence 34556666655444443334444458889999999999998 68877777776655554443
No 159
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=27.22 E-value=3.8e+02 Score=22.57 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=32.6
Q ss_pred hhcccHHHHHHHHHHHhhhcccc-------cccCcchhhhHHHHHhhhhhhee
Q 019098 109 ISNLTPGFTFTLAIIFRMEKLAL-------RSLGTWAKIIGTVVSVSGAMLVV 154 (346)
Q Consensus 109 i~~~~pi~~~lla~~~~~e~~~~-------~~~~s~~~~~~i~l~~~Gv~~~~ 154 (346)
.....|....++++...+||... +-+.+..+..+.++.++|+.++.
T Consensus 158 ~i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~~l~~ 210 (214)
T PF11139_consen 158 LIASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGALLLG 210 (214)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 34567888888999888877621 11225667888888999988764
No 160
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=27.18 E-value=50 Score=29.46 Aligned_cols=23 Identities=9% Similarity=0.314 Sum_probs=18.6
Q ss_pred cchhhhHHHHHHHHHHHHHhccC
Q 019098 304 LHLGSVIGGVIICVGFYVVIWGK 326 (346)
Q Consensus 304 ~~~~~~iG~~li~~G~~~~~~~~ 326 (346)
+|..|+++..+++.|+.+..+.+
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~ 268 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAY 268 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999987665433
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=25.59 E-value=6.5e+02 Score=24.74 Aligned_cols=13 Identities=8% Similarity=-0.092 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHH
Q 019098 287 LSVAIAAIMSFIF 299 (346)
Q Consensus 287 ~~pv~~~~~~~~~ 299 (346)
..|+-+.++|.+.
T Consensus 355 ~~~lGsll~G~la 367 (524)
T PF05977_consen 355 GMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHH
Confidence 3455555566543
No 162
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=24.75 E-value=50 Score=25.41 Aligned_cols=10 Identities=20% Similarity=0.082 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 019098 310 IGGVIICVGF 319 (346)
Q Consensus 310 iG~~li~~G~ 319 (346)
.|++.+++.+
T Consensus 75 aGvIg~Illi 84 (122)
T PF01102_consen 75 AGVIGIILLI 84 (122)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 163
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=22.25 E-value=9.7e+02 Score=25.56 Aligned_cols=149 Identities=11% Similarity=0.042 Sum_probs=67.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHhHhhhh------ccCCCCCCC--CC
Q 019098 5 NSYKDGLLFTAMVVAECTNVGLNILFKLATNKG---MSYFVFIFYSSATATLVLLLFPFIF------RSNTASLPL--LK 73 (346)
Q Consensus 5 ~~~~~~~~~~~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~--~~ 73 (346)
.+.+..+.+.+++...+......++.-.. ... +.+.+++++-.+...+-.+.+.... .+.++++.. ++
T Consensus 697 ~~~ni~k~i~~~l~~n~~~~~~~~~~~~~-~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~ 775 (917)
T COG0474 697 VYVNIKKFILYLLSKNVGEVLTLLIYSLF-NLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFN 775 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccc
Confidence 33344454555554444333333333333 234 7889999999888876444443221 110111111 44
Q ss_pred hhHHHH-HHHHHHHH-HHHHHHHHHhhcccch---------h-hhhhhhcccHHHHHHHHHHHhhhccccccc---Ccch
Q 019098 74 FPVISR-ICLLSLIG-SLLRILGYTGIAYSSP---------T-LASMISNLTPGFTFTLAIIFRMEKLALRSL---GTWA 138 (346)
Q Consensus 74 ~~~~~~-~~~~g~~~-~~~~~~~~~al~~~~~---------~-~~~~i~~~~pi~~~lla~~~~~e~~~~~~~---~s~~ 138 (346)
++.+++ ++..|... .+....|.+....... . ..+......-+...+.......++....+. .++.
T Consensus 776 ~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 855 (917)
T COG0474 776 RKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKY 855 (917)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHH
Confidence 555555 55666666 4443433333332211 1 111222222233333333334443434433 3555
Q ss_pred hhhHHHHHhhhhhhee
Q 019098 139 KIIGTVVSVSGAMLVV 154 (346)
Q Consensus 139 ~~~~i~l~~~Gv~~~~ 154 (346)
-+.+++++.+-.++..
T Consensus 856 ~~~~~~~~~~l~l~~~ 871 (917)
T COG0474 856 LWLALLVIIILQLLII 871 (917)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666666655554444
No 164
>COG0682 Lgt Prolipoprotein diacylglyceryltransferase [Cell envelope biogenesis, outer membrane]
Probab=22.22 E-value=67 Score=28.74 Aligned_cols=25 Identities=16% Similarity=0.472 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHHHhccCCCCcc
Q 019098 307 GSVIGGVIICVGFYVVIWGKANDEE 331 (346)
Q Consensus 307 ~~~iG~~li~~G~~~~~~~~~~~~~ 331 (346)
.|++...+|++|+.+..+.++|+++
T Consensus 255 gqilSi~mIl~Gi~~~~~~~~k~~~ 279 (287)
T COG0682 255 GQILSIPMILLGLWLIIYLYKKAKK 279 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccC
Confidence 6899999999999777665554333
No 165
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.08 E-value=67 Score=28.45 Aligned_cols=22 Identities=27% Similarity=0.747 Sum_probs=18.4
Q ss_pred cchhhhHHHHHHHHHHHHHhcc
Q 019098 304 LHLGSVIGGVIICVGFYVVIWG 325 (346)
Q Consensus 304 ~~~~~~iG~~li~~G~~~~~~~ 325 (346)
+|..|+++..+++.|+.+..+.
T Consensus 237 ls~~Q~isl~~~~~gi~~~~~~ 258 (269)
T PRK00052 237 LTMGQILSIPMILLGIILLIWA 258 (269)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999998766544
No 166
>PHA03049 IMV membrane protein; Provisional
Probab=21.23 E-value=1.4e+02 Score=20.13 Aligned_cols=17 Identities=12% Similarity=0.124 Sum_probs=10.3
Q ss_pred hhHHHHHHHHHHHHHhc
Q 019098 308 SVIGGVIICVGFYVVIW 324 (346)
Q Consensus 308 ~~iG~~li~~G~~~~~~ 324 (346)
-+++++++++|+.++-.
T Consensus 6 ~l~iICVaIi~lIvYgi 22 (68)
T PHA03049 6 ILVIICVVIIGLIVYGI 22 (68)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566677777666543
No 167
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=21.08 E-value=1.3e+02 Score=22.13 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=8.5
Q ss_pred ccccccccccC
Q 019098 334 NEDSSKISLLQ 344 (346)
Q Consensus 334 ~~~~~~~~~~~ 344 (346)
.+|.|+.|+|+
T Consensus 87 ~~d~EraPLLn 97 (97)
T PF08611_consen 87 STDRERAPLLN 97 (97)
T ss_pred CCccccccccC
Confidence 57788888874
No 168
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=20.74 E-value=1.6e+02 Score=22.88 Aligned_cols=13 Identities=31% Similarity=0.539 Sum_probs=7.3
Q ss_pred hhHHHHHHHHHHH
Q 019098 308 SVIGGVIICVGFY 320 (346)
Q Consensus 308 ~~iG~~li~~G~~ 320 (346)
.++|..+++.|+.
T Consensus 89 ~i~g~~~~~~G~~ 101 (136)
T PF08507_consen 89 IIIGLLLFLVGVI 101 (136)
T ss_pred HHHHHHHHHHHHH
Confidence 3456666666643
Done!