BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019102
         (346 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P21616|AVP_VIGRR Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna
           radiata var. radiata PE=1 SV=3
          Length = 765

 Score = 39.3 bits (90), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 18/108 (16%)

Query: 84  RGVHPAWLLAFR-------VLAFAVLLILLVATALFDGGSIFYYYTQWTCTFTAIY-FGL 135
           +GV  A++ AFR       +LA   LL+L +A  LF      YY   W   F AI  +GL
Sbjct: 177 KGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFK----IYYGDDWGGLFEAITGYGL 232

Query: 136 G-SSLSMYG-----CYQYHKSLGGDKVDNVEGDAEQGICATPAVLGES 177
           G SS++++G      Y     +G D V  VE +  +     PAV+ ++
Sbjct: 233 GGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADN 280


>sp|Q06572|AVP_HORVU Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum
           vulgare PE=2 SV=2
          Length = 762

 Score = 33.5 bits (75), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 18/108 (16%)

Query: 84  RGVHPAWLLAFR-------VLAFAVLLILLVATALFDGGSIFYYYTQWTCTFTAIY-FGL 135
           +GV  A++ AFR       +L+ + L++L +   +F      YY   W   F +I  +GL
Sbjct: 173 KGVGKAFITAFRSGAVMGFLLSSSGLVVLYITINVFK----MYYGDDWEGLFESITGYGL 228

Query: 136 G-SSLSMYG-----CYQYHKSLGGDKVDNVEGDAEQGICATPAVLGES 177
           G SS++++G      Y     +G D V  VE +  +     PAV+ ++
Sbjct: 229 GGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADN 276


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.329    0.140    0.479 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,060,736
Number of Sequences: 539616
Number of extensions: 4948158
Number of successful extensions: 12587
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 12585
Number of HSP's gapped (non-prelim): 9
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)