Query 019103
Match_columns 346
No_of_seqs 151 out of 771
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 10:56:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mbr_X Glutamine cyclotransfer 100.0 6.5E-70 2.2E-74 510.6 35.1 239 86-326 2-240 (243)
2 3nol_A Glutamine cyclotransfer 100.0 6.3E-68 2.2E-72 502.0 33.0 235 85-322 23-257 (262)
3 3nok_A Glutaminyl cyclase; bet 100.0 6.8E-65 2.3E-69 482.3 29.9 229 87-320 37-265 (268)
4 2iwa_A Glutamine cyclotransfer 100.0 3.6E-63 1.2E-67 469.9 36.6 252 86-342 2-253 (266)
5 3dsm_A Uncharacterized protein 99.9 1.8E-21 6.1E-26 183.8 27.3 187 105-319 44-251 (328)
6 3dsm_A Uncharacterized protein 99.9 4.1E-22 1.4E-26 188.2 22.6 205 92-318 73-299 (328)
7 3c75_H MADH, methylamine dehyd 99.9 3E-21 1E-25 193.3 22.5 190 116-320 85-401 (426)
8 3vgz_A Uncharacterized protein 99.9 4E-19 1.4E-23 163.0 29.1 208 92-319 78-301 (353)
9 3vgz_A Uncharacterized protein 99.9 3.6E-19 1.2E-23 163.3 26.4 206 96-319 34-260 (353)
10 3c75_H MADH, methylamine dehyd 99.8 1.1E-19 3.7E-24 182.0 18.4 173 91-272 107-409 (426)
11 2iwa_A Glutamine cyclotransfer 99.8 1E-18 3.6E-23 165.2 22.0 167 137-319 8-179 (266)
12 2mad_H Methylamine dehydrogena 99.8 7.1E-18 2.4E-22 164.1 27.7 208 92-320 56-349 (373)
13 1mda_H Methylamine dehydrogena 99.8 3.2E-19 1.1E-23 175.1 17.0 185 116-320 32-345 (368)
14 1qks_A Cytochrome CD1 nitrite 99.8 4.7E-18 1.6E-22 175.1 25.6 213 92-322 186-478 (567)
15 3sjl_D Methylamine dehydrogena 99.8 3.5E-18 1.2E-22 169.4 22.9 211 92-319 68-361 (386)
16 2oiz_A Aromatic amine dehydrog 99.8 4.5E-18 1.6E-22 163.2 21.1 187 116-320 16-333 (361)
17 2oiz_A Aromatic amine dehydrog 99.8 7.8E-18 2.7E-22 161.6 20.6 186 92-302 40-360 (361)
18 1mda_H Methylamine dehydrogena 99.8 1.4E-18 4.9E-23 170.5 14.9 186 92-300 55-367 (368)
19 3nok_A Glutaminyl cyclase; bet 99.8 5E-17 1.7E-21 154.1 21.5 163 139-319 44-208 (268)
20 1nir_A Nitrite reductase; hemo 99.8 1.4E-16 4.6E-21 162.1 24.6 212 92-320 211-457 (543)
21 3nol_A Glutamine cyclotransfer 99.7 1.3E-16 4.5E-21 150.8 22.3 165 138-319 31-199 (262)
22 1l0q_A Surface layer protein; 99.7 1.1E-15 3.7E-20 143.1 28.0 203 93-319 64-273 (391)
23 1l0q_A Surface layer protein; 99.7 8.7E-16 3E-20 143.7 27.4 203 93-319 22-231 (391)
24 3fvz_A Peptidyl-glycine alpha- 99.7 3.4E-16 1.1E-20 146.9 24.6 214 95-322 81-323 (329)
25 1fwx_A Nitrous oxide reductase 99.7 8.5E-18 2.9E-22 174.5 14.6 207 92-314 121-413 (595)
26 1qks_A Cytochrome CD1 nitrite 99.7 1.5E-16 5.2E-21 163.8 23.0 192 111-319 162-371 (567)
27 1nir_A Nitrite reductase; hemo 99.7 1E-16 3.6E-21 162.9 20.7 192 111-319 144-353 (543)
28 1pby_B Quinohemoprotein amine 99.7 3.3E-16 1.1E-20 141.9 21.6 205 92-319 20-267 (337)
29 3u4y_A Uncharacterized protein 99.7 3.1E-16 1E-20 143.5 19.8 205 93-319 30-250 (331)
30 3mbr_X Glutamine cyclotransfer 99.7 9.7E-16 3.3E-20 143.4 23.2 164 139-319 10-177 (243)
31 1jmx_B Amine dehydrogenase; ox 99.7 2.7E-15 9.3E-20 136.9 25.6 202 93-319 31-323 (349)
32 3u4y_A Uncharacterized protein 99.7 1.5E-15 5E-20 139.0 23.7 211 96-320 76-303 (331)
33 2mad_H Methylamine dehydrogena 99.7 1.4E-15 4.8E-20 147.9 24.8 188 114-319 30-241 (373)
34 3sjl_D Methylamine dehydrogena 99.7 2E-16 6.9E-21 156.7 16.6 147 157-314 42-212 (386)
35 1npe_A Nidogen, entactin; glyc 99.7 4.1E-15 1.4E-19 135.0 23.8 175 106-302 80-263 (267)
36 1fwx_A Nitrous oxide reductase 99.7 6E-16 2.1E-20 160.7 20.2 185 115-320 100-360 (595)
37 2ece_A 462AA long hypothetical 99.7 7.3E-16 2.5E-20 155.8 17.8 226 92-321 119-425 (462)
38 2p4o_A Hypothetical protein; p 99.7 4.9E-15 1.7E-19 138.0 22.1 187 107-310 74-278 (306)
39 1jmx_B Amine dehydrogenase; ox 99.7 1.6E-15 5.5E-20 138.4 17.7 159 109-275 4-185 (349)
40 3g4e_A Regucalcin; six bladed 99.7 5.1E-14 1.8E-18 130.1 27.8 199 98-320 49-285 (297)
41 3bws_A Protein LP49; two-domai 99.7 8.1E-14 2.8E-18 132.1 29.2 203 94-319 202-430 (433)
42 3hfq_A Uncharacterized protein 99.7 3.8E-14 1.3E-18 131.3 24.7 216 93-320 30-270 (347)
43 1ri6_A Putative isomerase YBHE 99.6 1.4E-13 4.8E-18 124.9 26.1 214 92-320 27-261 (343)
44 2qe8_A Uncharacterized protein 99.6 6.1E-15 2.1E-19 139.5 17.2 191 105-312 67-312 (343)
45 1npe_A Nidogen, entactin; glyc 99.6 2.2E-13 7.6E-18 123.5 25.9 188 108-319 39-236 (267)
46 3bws_A Protein LP49; two-domai 99.6 2E-13 6.8E-18 129.4 25.5 185 106-312 171-367 (433)
47 1rwi_B Serine/threonine-protei 99.6 4.1E-14 1.4E-18 126.0 19.0 195 106-324 68-267 (270)
48 1pby_B Quinohemoprotein amine 99.6 3.7E-14 1.3E-18 128.3 18.9 172 117-313 2-197 (337)
49 3fvz_A Peptidyl-glycine alpha- 99.6 1.1E-13 3.8E-18 129.6 22.5 181 107-299 26-250 (329)
50 2p4o_A Hypothetical protein; p 99.6 2.4E-13 8.2E-18 126.6 24.1 208 88-318 17-239 (306)
51 3qqz_A Putative uncharacterize 99.6 1.2E-12 4.1E-17 122.9 28.9 218 89-318 11-250 (255)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.1E-13 7.2E-18 123.7 22.4 196 107-320 73-298 (314)
53 3hrp_A Uncharacterized protein 99.6 4.2E-13 1.4E-17 131.6 25.5 206 106-318 132-351 (409)
54 1ijq_A LDL receptor, low-densi 99.6 9.8E-13 3.3E-17 124.2 25.7 180 117-320 3-194 (316)
55 1q7f_A NHL, brain tumor CG1071 99.6 9.4E-13 3.2E-17 119.0 24.0 191 106-318 31-235 (286)
56 2dg1_A DRP35, lactonase; beta 99.6 1.5E-12 5E-17 119.9 25.0 205 106-320 88-315 (333)
57 1ri6_A Putative isomerase YBHE 99.6 6.4E-13 2.2E-17 120.5 21.9 211 92-320 73-307 (343)
58 1q7f_A NHL, brain tumor CG1071 99.5 2.2E-12 7.6E-17 116.5 24.9 192 106-319 78-278 (286)
59 3hfq_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 118.2 26.6 210 93-320 75-316 (347)
60 2qc5_A Streptogramin B lactona 99.5 6.3E-12 2.2E-16 112.3 26.3 189 105-319 62-258 (300)
61 3scy_A Hypothetical bacterial 99.5 3.9E-12 1.3E-16 118.7 25.4 212 93-319 41-289 (361)
62 3v65_B Low-density lipoprotein 99.5 1.3E-12 4.5E-17 127.1 22.2 182 115-320 87-276 (386)
63 3v64_C Agrin; beta propeller, 99.5 2.1E-12 7.2E-17 124.1 23.1 182 115-320 44-233 (349)
64 2z2n_A Virginiamycin B lyase; 99.5 1.4E-11 4.8E-16 110.0 26.9 190 105-319 15-211 (299)
65 1rwi_B Serine/threonine-protei 99.5 5.1E-13 1.8E-17 118.8 17.1 189 106-319 25-220 (270)
66 2z2n_A Virginiamycin B lyase; 99.5 1.8E-11 6E-16 109.4 26.3 190 105-320 99-294 (299)
67 1jof_A Carboxy-CIS,CIS-muconat 99.5 6.1E-12 2.1E-16 119.0 24.5 213 92-319 27-289 (365)
68 3scy_A Hypothetical bacterial 99.5 8.3E-12 2.8E-16 116.4 25.0 206 93-319 89-335 (361)
69 3e5z_A Putative gluconolactona 99.5 9.6E-12 3.3E-16 113.4 24.4 188 106-320 70-285 (296)
70 2ece_A 462AA long hypothetical 99.5 9.5E-13 3.3E-17 133.1 18.8 179 123-316 38-284 (462)
71 1ijq_A LDL receptor, low-densi 99.5 2.3E-11 8E-16 114.8 27.2 197 99-318 26-235 (316)
72 4hw6_A Hypothetical protein, I 99.5 4E-12 1.4E-16 126.3 22.9 208 107-320 141-432 (433)
73 2fp8_A Strictosidine synthase; 99.5 3.7E-12 1.3E-16 118.7 21.3 192 108-320 83-312 (322)
74 2ghs_A AGR_C_1268P; regucalcin 99.5 1.2E-11 4.1E-16 116.3 24.5 189 107-319 92-314 (326)
75 2qe8_A Uncharacterized protein 99.5 5E-12 1.7E-16 119.5 21.4 216 92-319 8-276 (343)
76 2qc5_A Streptogramin B lactona 99.5 5.5E-11 1.9E-15 106.2 26.7 199 95-319 9-216 (300)
77 3v65_B Low-density lipoprotein 99.4 2.3E-11 7.7E-16 118.4 25.0 189 107-318 118-315 (386)
78 3v64_C Agrin; beta propeller, 99.4 2.6E-11 9E-16 116.4 24.7 189 107-318 75-272 (349)
79 3p5b_L Low density lipoprotein 99.4 2.8E-11 9.6E-16 118.6 24.3 180 117-320 85-276 (400)
80 3hrp_A Uncharacterized protein 99.4 6.7E-11 2.3E-15 115.9 26.4 201 110-319 176-408 (409)
81 3tc9_A Hypothetical hydrolase; 99.4 2.5E-11 8.5E-16 120.2 23.3 207 107-320 181-429 (430)
82 3dr2_A Exported gluconolactona 99.4 3.8E-11 1.3E-15 111.0 21.8 190 104-319 85-304 (305)
83 3no2_A Uncharacterized protein 99.4 2.9E-10 1E-14 105.5 27.9 206 93-317 25-249 (276)
84 3sov_A LRP-6, low-density lipo 99.4 2.8E-11 9.5E-16 115.4 21.4 182 117-320 6-196 (318)
85 1jof_A Carboxy-CIS,CIS-muconat 99.4 5.4E-11 1.8E-15 112.5 23.2 199 108-319 86-339 (365)
86 3p5b_L Low density lipoprotein 99.4 4.4E-11 1.5E-15 117.2 22.7 175 106-302 160-344 (400)
87 4a0p_A LRP6, LRP-6, low-densit 99.4 1.2E-10 4E-15 121.4 26.2 182 116-320 7-196 (628)
88 3sov_A LRP-6, low-density lipo 99.4 3.4E-11 1.2E-15 114.8 19.1 158 107-274 81-247 (318)
89 3m0c_C LDL receptor, low-densi 99.3 1.5E-10 5.1E-15 123.9 23.7 180 117-320 397-588 (791)
90 3g4e_A Regucalcin; six bladed 99.3 9.7E-10 3.3E-14 101.3 25.4 193 102-318 10-226 (297)
91 3tc9_A Hypothetical hydrolase; 99.3 1.7E-10 5.8E-15 114.2 20.9 203 107-318 139-368 (430)
92 3m0c_C LDL receptor, low-densi 99.3 4.8E-10 1.7E-14 119.9 25.4 191 107-318 426-629 (791)
93 3kya_A Putative phosphatase; s 99.3 4.5E-10 1.5E-14 114.6 23.5 222 107-329 188-483 (496)
94 2dg1_A DRP35, lactonase; beta 99.3 1.6E-09 5.5E-14 99.5 24.7 207 93-318 34-260 (333)
95 3s94_A LRP-6, low-density lipo 99.3 2.5E-10 8.7E-15 118.5 21.3 181 118-320 12-201 (619)
96 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.3E-09 4.3E-14 98.7 22.4 193 104-319 17-254 (314)
97 1n7d_A LDL receptor, low-densi 99.2 1.6E-11 5.3E-16 129.1 9.4 160 107-274 455-623 (699)
98 4a0p_A LRP6, LRP-6, low-densit 99.2 2E-09 7E-14 112.0 24.8 195 98-318 30-234 (628)
99 1n7d_A LDL receptor, low-densi 99.2 9.3E-12 3.2E-16 130.9 6.5 180 117-320 379-570 (699)
100 1gxr_A ESG1, transducin-like e 99.2 2.9E-08 9.9E-13 89.2 27.5 186 107-317 144-333 (337)
101 4gqb_B Methylosome protein 50; 99.2 2.7E-09 9.2E-14 101.4 21.3 195 104-319 127-329 (344)
102 2fp8_A Strictosidine synthase; 99.2 6.5E-10 2.2E-14 103.4 16.6 154 105-265 126-313 (322)
103 3s94_A LRP-6, low-density lipo 99.2 5E-09 1.7E-13 108.8 24.7 192 106-319 41-241 (619)
104 3kya_A Putative phosphatase; s 99.2 1.2E-09 4E-14 111.6 19.4 203 108-318 142-407 (496)
105 3e5z_A Putative gluconolactona 99.2 5.3E-09 1.8E-13 95.1 21.5 152 149-320 27-201 (296)
106 2aq5_A Coronin-1A; WD40 repeat 99.1 6.7E-09 2.3E-13 98.3 22.4 196 106-320 83-298 (402)
107 3zwl_B Eukaryotic translation 99.1 2.2E-08 7.5E-13 90.9 24.6 196 94-311 65-281 (369)
108 3no2_A Uncharacterized protein 99.1 1E-08 3.6E-13 95.0 22.6 181 116-319 5-193 (276)
109 3ow8_A WD repeat-containing pr 99.1 6.2E-08 2.1E-12 90.3 27.8 197 94-314 113-314 (321)
110 1gxr_A ESG1, transducin-like e 99.1 3.9E-08 1.3E-12 88.4 24.5 202 92-319 41-253 (337)
111 4ery_A WD repeat-containing pr 99.1 6.2E-08 2.1E-12 88.1 26.1 201 93-316 13-218 (312)
112 1erj_A Transcriptional repress 99.1 5.7E-08 2E-12 92.5 26.4 211 89-318 51-284 (393)
113 3dr2_A Exported gluconolactona 99.1 9.7E-09 3.3E-13 94.7 20.0 152 149-320 44-223 (305)
114 1kb0_A Quinohemoprotein alcoho 99.1 1.8E-08 6.1E-13 105.3 24.3 204 107-317 121-420 (677)
115 2p9w_A MAL S 1 allergenic prot 99.1 2.7E-09 9.3E-14 104.0 16.2 163 148-320 11-214 (334)
116 3zwl_B Eukaryotic translation 99.1 4.7E-08 1.6E-12 88.7 23.2 206 93-318 23-246 (369)
117 2vdu_B TRNA (guanine-N(7)-)-me 99.1 2.1E-08 7.2E-13 96.9 21.8 207 106-319 104-337 (450)
118 4hw6_A Hypothetical protein, I 99.0 3.1E-09 1.1E-13 105.4 15.9 149 152-320 141-303 (433)
119 2ad6_A Methanol dehydrogenase 99.0 4E-08 1.4E-12 100.7 24.6 197 107-311 108-407 (571)
120 1r5m_A SIR4-interacting protei 99.0 3.2E-08 1.1E-12 91.6 21.6 203 94-319 140-359 (425)
121 4ery_A WD repeat-containing pr 99.0 1.6E-07 5.5E-12 85.3 25.6 195 95-308 99-298 (312)
122 3q7m_A Lipoprotein YFGL, BAMB; 99.0 9.8E-08 3.4E-12 89.8 25.0 181 111-318 185-375 (376)
123 4g56_B MGC81050 protein; prote 99.0 8.9E-09 3.1E-13 97.5 17.5 194 105-319 140-341 (357)
124 4aez_A CDC20, WD repeat-contai 99.0 3.3E-07 1.1E-11 87.0 28.3 202 95-319 125-334 (401)
125 3ow8_A WD repeat-containing pr 99.0 1.9E-07 6.6E-12 87.0 25.7 187 107-315 83-273 (321)
126 4gqb_B Methylosome protein 50; 99.0 1.2E-08 3.9E-13 97.0 17.3 189 107-315 85-283 (344)
127 4h5i_A Guanine nucleotide-exch 99.0 1E-07 3.5E-12 90.6 23.3 199 102-319 131-341 (365)
128 1sq9_A Antiviral protein SKI8; 99.0 9.1E-08 3.1E-12 88.9 22.3 208 105-319 122-393 (397)
129 2hqs_A Protein TOLB; TOLB, PAL 99.0 3.8E-08 1.3E-12 95.5 20.4 191 107-319 181-385 (415)
130 3vl1_A 26S proteasome regulato 99.0 1E-07 3.6E-12 89.4 22.5 198 108-320 101-321 (420)
131 3amr_A 3-phytase; beta-propell 99.0 3.9E-08 1.3E-12 96.6 20.2 178 117-319 41-261 (355)
132 3q7m_A Lipoprotein YFGL, BAMB; 99.0 9.8E-08 3.4E-12 89.8 22.3 178 91-274 26-216 (376)
133 2ghs_A AGR_C_1268P; regucalcin 99.0 5.4E-08 1.8E-12 91.2 20.2 152 149-320 48-209 (326)
134 2ovr_B FBW7, F-BOX/WD repeat p 98.9 5E-07 1.7E-11 86.5 26.4 185 108-310 243-428 (445)
135 1k8k_C P40, ARP2/3 complex 41 98.9 2.3E-07 7.9E-12 84.9 22.9 203 94-320 43-273 (372)
136 3i2n_A WD repeat-containing pr 98.9 3.7E-07 1.3E-11 82.8 22.6 196 107-319 21-241 (357)
137 1r5m_A SIR4-interacting protei 98.9 1.7E-07 5.7E-12 86.8 20.4 206 93-319 36-276 (425)
138 1got_B GT-beta; complex (GTP-b 98.9 1.1E-06 3.7E-11 81.8 25.9 194 94-308 134-331 (340)
139 1kb0_A Quinohemoprotein alcoho 98.9 2E-07 6.9E-12 97.3 23.1 181 108-307 246-537 (677)
140 2ism_A Putative oxidoreductase 98.9 1.7E-07 5.8E-12 90.0 20.5 190 106-307 76-331 (352)
141 1w6s_A Methanol dehydrogenase 98.9 2.6E-07 9E-12 95.8 23.2 205 107-316 108-419 (599)
142 1got_B GT-beta; complex (GTP-b 98.9 9.3E-07 3.2E-11 82.3 24.8 195 94-309 88-290 (340)
143 2pbi_B Guanine nucleotide-bind 98.9 5.8E-07 2E-11 84.7 23.5 186 105-308 155-345 (354)
144 2ad6_A Methanol dehydrogenase 98.9 6.7E-07 2.3E-11 91.6 25.8 162 109-275 239-504 (571)
145 2ynn_A Coatomer subunit beta'; 98.9 6.9E-07 2.4E-11 81.9 23.0 202 93-315 3-211 (304)
146 1erj_A Transcriptional repress 98.9 1.7E-06 5.9E-11 82.2 26.5 209 94-320 156-388 (393)
147 1vyh_C Platelet-activating fac 98.8 6.4E-07 2.2E-11 86.1 23.4 197 96-316 143-364 (410)
148 1sq9_A Antiviral protein SKI8; 98.8 2.7E-07 9.3E-12 85.6 20.1 205 107-318 65-319 (397)
149 3a9g_A Putative uncharacterize 98.8 1.4E-06 4.7E-11 84.1 25.4 209 91-319 19-350 (354)
150 1vyh_C Platelet-activating fac 98.8 5.5E-07 1.9E-11 86.5 22.4 175 106-301 110-288 (410)
151 2ynn_A Coatomer subunit beta'; 98.8 1E-06 3.6E-11 80.7 23.2 202 95-318 89-299 (304)
152 3ei3_B DNA damage-binding prot 98.8 1.5E-06 5E-11 81.0 24.6 201 93-319 63-280 (383)
153 1yiq_A Quinohemoprotein alcoho 98.8 5.8E-07 2E-11 94.0 24.1 206 107-317 114-416 (689)
154 2ojh_A Uncharacterized protein 98.8 4.6E-07 1.6E-11 79.1 19.5 180 117-319 11-204 (297)
155 3mkq_A Coatomer beta'-subunit; 98.8 7.6E-07 2.6E-11 91.0 24.0 201 94-317 4-213 (814)
156 1kv9_A Type II quinohemoprotei 98.8 4.5E-07 1.5E-11 94.5 22.6 204 107-317 110-408 (668)
157 2z3z_A Dipeptidyl aminopeptida 98.8 2E-07 6.8E-12 94.7 19.5 194 108-319 85-342 (706)
158 2ecf_A Dipeptidyl peptidase IV 98.8 1.5E-07 5.2E-12 95.9 18.3 193 108-319 112-367 (741)
159 4g56_B MGC81050 protein; prote 98.8 3.9E-08 1.3E-12 93.0 12.3 189 107-315 97-295 (357)
160 3mmy_A MRNA export factor; mRN 98.8 5.3E-06 1.8E-10 75.1 25.9 191 107-315 89-342 (368)
161 4aez_A CDC20, WD repeat-contai 98.8 4.5E-06 1.5E-10 79.1 26.5 204 93-319 82-291 (401)
162 2vdu_B TRNA (guanine-N(7)-)-me 98.8 3.7E-06 1.3E-10 81.1 26.1 205 94-319 141-391 (450)
163 1k8k_C P40, ARP2/3 complex 41 98.8 1.4E-06 4.9E-11 79.6 21.9 193 108-318 12-230 (372)
164 2pbi_B Guanine nucleotide-bind 98.8 3.3E-06 1.1E-10 79.4 24.9 200 93-316 54-266 (354)
165 3ei3_B DNA damage-binding prot 98.8 1.1E-06 3.6E-11 82.0 21.1 184 105-308 164-371 (383)
166 4aow_A Guanine nucleotide-bind 98.8 4.5E-06 1.5E-10 75.3 24.5 194 107-314 131-330 (340)
167 3frx_A Guanine nucleotide-bind 98.8 3.8E-06 1.3E-10 77.6 24.5 203 94-315 98-311 (319)
168 2pm9_A Protein WEB1, protein t 98.8 1.6E-07 5.6E-12 87.5 15.4 196 107-321 116-337 (416)
169 3vl1_A 26S proteasome regulato 98.7 1.1E-06 3.8E-11 82.3 20.9 200 105-315 182-413 (420)
170 2ism_A Putative oxidoreductase 98.7 2.9E-06 9.9E-11 81.4 24.0 210 92-323 22-299 (352)
171 3i2n_A WD repeat-containing pr 98.7 8.9E-07 3E-11 80.3 19.4 205 96-320 59-290 (357)
172 3fm0_A Protein CIAO1; WDR39,SG 98.7 1.9E-06 6.4E-11 80.6 22.1 205 92-314 4-218 (345)
173 3sre_A PON1, serum paraoxonase 98.7 1E-06 3.5E-11 86.1 20.8 134 168-320 81-251 (355)
174 3frx_A Guanine nucleotide-bind 98.7 1.2E-05 4.1E-10 74.2 27.0 195 96-315 58-263 (319)
175 3pe7_A Oligogalacturonate lyas 98.7 8.7E-07 3E-11 82.4 19.3 191 127-321 167-384 (388)
176 3mkq_A Coatomer beta'-subunit; 98.7 2.9E-06 9.8E-11 86.8 24.8 203 94-319 88-300 (814)
177 2z3z_A Dipeptidyl aminopeptida 98.7 9.1E-07 3.1E-11 89.9 20.3 174 126-319 233-433 (706)
178 3qqz_A Putative uncharacterize 98.7 1.7E-06 5.8E-11 81.0 20.1 163 146-319 25-202 (255)
179 2hqs_A Protein TOLB; TOLB, PAL 98.7 1.4E-06 4.8E-11 84.4 20.3 172 128-319 159-342 (415)
180 2ymu_A WD-40 repeat protein; u 98.7 5.3E-06 1.8E-10 81.2 24.4 189 95-309 377-569 (577)
181 3k26_A Polycomb protein EED; W 98.7 1.7E-06 5.9E-11 78.4 19.5 221 91-320 5-259 (366)
182 2oaj_A Protein SNI1; WD40 repe 98.7 6.3E-06 2.2E-10 88.5 26.9 207 91-308 6-230 (902)
183 4a11_B DNA excision repair pro 98.7 1.2E-06 4.1E-11 80.7 18.4 204 106-319 45-274 (408)
184 3k26_A Polycomb protein EED; W 98.7 6.5E-07 2.2E-11 81.2 16.3 194 108-319 73-316 (366)
185 1nr0_A Actin interacting prote 98.7 4.4E-06 1.5E-10 84.5 24.1 185 106-309 149-344 (611)
186 2aq5_A Coronin-1A; WD40 repeat 98.7 6.8E-07 2.3E-11 84.5 17.0 181 107-305 134-329 (402)
187 2ojh_A Uncharacterized protein 98.7 4.9E-07 1.7E-11 79.0 14.8 186 107-310 87-292 (297)
188 3pe7_A Oligogalacturonate lyas 98.7 1.8E-06 6.1E-11 80.2 19.2 191 110-319 41-271 (388)
189 3hxj_A Pyrrolo-quinoline quino 98.7 2.1E-06 7E-11 78.0 19.1 181 106-318 138-321 (330)
190 3jrp_A Fusion protein of prote 98.6 2.9E-06 9.9E-11 77.3 19.3 197 107-319 14-238 (379)
191 3dw8_B Serine/threonine-protei 98.6 3.9E-06 1.3E-10 79.0 20.8 212 97-315 170-442 (447)
192 2pm9_A Protein WEB1, protein t 98.6 3.3E-07 1.1E-11 85.4 13.2 201 108-319 16-247 (416)
193 3sfz_A APAF-1, apoptotic pepti 98.6 3E-06 1E-10 91.5 22.4 201 107-317 618-824 (1249)
194 3v7d_B Cell division control p 98.6 1.1E-05 3.8E-10 77.1 24.1 178 112-312 276-454 (464)
195 2ovr_B FBW7, F-BOX/WD repeat p 98.6 2E-05 6.8E-10 75.4 25.9 197 94-319 150-346 (445)
196 2ymu_A WD-40 repeat protein; u 98.6 1.6E-05 5.4E-10 77.8 25.6 179 107-309 306-487 (577)
197 2xdw_A Prolyl endopeptidase; a 98.6 1.3E-05 4.5E-10 82.5 25.7 196 108-319 174-412 (710)
198 1p22_A F-BOX/WD-repeat protein 98.6 1.3E-05 4.4E-10 76.7 23.9 197 94-319 164-363 (435)
199 1flg_A Protein (quinoprotein e 98.6 4.1E-06 1.4E-10 86.2 21.4 162 108-275 111-365 (582)
200 1pgu_A Actin interacting prote 98.6 2.2E-05 7.6E-10 76.7 25.7 208 94-318 107-325 (615)
201 3f3f_A Nucleoporin SEH1; struc 98.6 1.9E-05 6.5E-10 70.1 22.9 203 104-321 11-249 (351)
202 3gre_A Serine/threonine-protei 98.6 1.5E-05 5.1E-10 75.5 23.2 214 96-319 105-357 (437)
203 3v7d_B Cell division control p 98.6 5E-05 1.7E-09 72.5 27.0 201 94-319 153-379 (464)
204 1pgu_A Actin interacting prote 98.6 5.5E-06 1.9E-10 81.0 20.6 163 106-273 162-336 (615)
205 3iz6_a 40S ribosomal protein R 98.6 1E-05 3.4E-10 76.6 21.8 197 107-315 160-369 (380)
206 3odt_A Protein DOA1; ubiquitin 98.6 2.7E-05 9.1E-10 69.1 23.0 184 107-320 107-295 (313)
207 3vu4_A KMHSV2; beta-propeller 98.5 1.9E-05 6.5E-10 74.2 22.9 183 109-318 63-268 (355)
208 4a11_B DNA excision repair pro 98.5 1.8E-05 6.2E-10 72.8 22.3 115 105-221 100-220 (408)
209 2ecf_A Dipeptidyl peptidase IV 98.5 3E-06 1E-10 86.4 18.4 184 108-309 40-305 (741)
210 4gq1_A NUP37; propeller, trans 98.5 7.7E-06 2.6E-10 78.0 20.1 199 104-321 136-389 (393)
211 3sre_A PON1, serum paraoxonase 98.5 1E-05 3.4E-10 79.1 21.1 202 107-315 114-352 (355)
212 2xyi_A Probable histone-bindin 98.5 5.1E-06 1.7E-10 79.9 18.8 208 92-321 118-353 (430)
213 1xfd_A DIP, dipeptidyl aminope 98.5 1.3E-06 4.5E-11 88.6 15.3 201 107-318 63-341 (723)
214 3gre_A Serine/threonine-protei 98.5 1.8E-05 6.1E-10 75.0 22.2 206 108-315 172-434 (437)
215 3dwl_C Actin-related protein 2 98.5 5.9E-07 2E-11 83.1 11.6 189 107-319 58-279 (377)
216 1yfq_A Cell cycle arrest prote 98.5 6.5E-06 2.2E-10 74.5 18.2 208 96-319 50-280 (342)
217 2p9w_A MAL S 1 allergenic prot 98.5 7.7E-06 2.6E-10 79.7 19.7 186 108-309 66-303 (334)
218 3jrp_A Fusion protein of prote 98.5 2E-05 6.8E-10 71.8 21.3 210 93-317 45-283 (379)
219 1yfq_A Cell cycle arrest prote 98.5 4.1E-06 1.4E-10 75.8 16.5 186 106-316 13-220 (342)
220 3mmy_A MRNA export factor; mRN 98.5 4.6E-05 1.6E-09 68.8 23.5 123 104-229 39-170 (368)
221 3sfz_A APAF-1, apoptotic pepti 98.5 2E-05 6.7E-10 85.2 24.6 200 94-310 648-861 (1249)
222 3odt_A Protein DOA1; ubiquitin 98.5 6.9E-05 2.3E-09 66.4 23.9 200 92-319 7-212 (313)
223 1p22_A F-BOX/WD-repeat protein 98.5 4.6E-05 1.6E-09 72.9 24.3 183 113-319 140-323 (435)
224 3iz6_a 40S ribosomal protein R 98.5 3.6E-05 1.2E-09 72.7 23.3 210 92-317 55-325 (380)
225 2g8s_A Glucose/sorbosone dehyd 98.5 9.8E-06 3.3E-10 77.8 19.3 200 108-318 69-351 (353)
226 1kv9_A Type II quinohemoprotei 98.5 1.9E-05 6.6E-10 82.1 23.0 162 109-275 234-498 (668)
227 1nr0_A Actin interacting prote 98.4 4.2E-05 1.4E-09 77.4 24.1 188 94-302 181-380 (611)
228 3amr_A 3-phytase; beta-propell 98.4 7.8E-06 2.7E-10 80.2 18.0 181 118-303 89-311 (355)
229 2xzm_R RACK1; ribosome, transl 98.4 3.9E-05 1.3E-09 71.2 21.7 206 95-315 110-334 (343)
230 3a9g_A Putative uncharacterize 98.4 5.4E-06 1.8E-10 79.9 15.9 159 152-320 31-227 (354)
231 3f3f_A Nucleoporin SEH1; struc 98.4 0.00014 4.9E-09 64.3 23.7 167 93-267 47-251 (351)
232 1k32_A Tricorn protease; prote 98.4 6E-06 2.1E-10 89.0 17.5 179 106-309 297-491 (1045)
233 2xdw_A Prolyl endopeptidase; a 98.4 2E-05 6.8E-10 81.2 20.5 196 108-319 128-366 (710)
234 3hxj_A Pyrrolo-quinoline quino 98.4 4.4E-06 1.5E-10 75.8 13.8 176 108-317 63-240 (330)
235 2xyi_A Probable histone-bindin 98.4 1.6E-05 5.5E-10 76.4 18.4 193 108-320 185-409 (430)
236 1xfd_A DIP, dipeptidyl aminope 98.4 4.8E-06 1.6E-10 84.4 15.2 188 108-308 20-273 (723)
237 4aow_A Guanine nucleotide-bind 98.4 0.00029 1E-08 63.2 25.6 196 92-309 27-235 (340)
238 1flg_A Protein (quinoprotein e 98.4 8.1E-05 2.8E-09 76.5 24.5 162 109-275 250-526 (582)
239 2w18_A PALB2, fancn, partner a 98.4 0.00013 4.4E-09 71.6 24.7 186 115-315 144-351 (356)
240 1w6s_A Methanol dehydrogenase 98.4 0.00012 4E-09 75.9 25.6 162 109-275 245-513 (599)
241 3o4h_A Acylamino-acid-releasin 98.4 3.2E-05 1.1E-09 77.0 20.7 190 106-312 66-267 (582)
242 1yiq_A Quinohemoprotein alcoho 98.4 5.4E-05 1.9E-09 79.1 23.2 161 109-274 239-514 (689)
243 3dm0_A Maltose-binding peripla 98.4 4.7E-05 1.6E-09 77.7 22.3 207 95-314 464-686 (694)
244 3o4h_A Acylamino-acid-releasin 98.4 1.8E-05 6E-10 78.9 18.4 173 109-313 114-304 (582)
245 2xzm_R RACK1; ribosome, transl 98.3 0.00031 1.1E-08 65.0 25.5 204 92-318 10-241 (343)
246 3azo_A Aminopeptidase; POP fam 98.3 1.8E-05 6E-10 79.7 18.2 197 108-319 133-367 (662)
247 1k32_A Tricorn protease; prote 98.3 5.4E-05 1.9E-09 81.6 23.0 193 106-320 380-636 (1045)
248 1z68_A Fibroblast activation p 98.3 6.1E-06 2.1E-10 84.1 14.7 110 109-223 20-143 (719)
249 3lrv_A PRE-mRNA-splicing facto 98.3 2.3E-05 7.8E-10 72.6 17.3 170 94-267 115-294 (343)
250 3dw8_B Serine/threonine-protei 98.3 5.3E-05 1.8E-09 71.3 19.4 202 106-319 30-313 (447)
251 3c5m_A Oligogalacturonate lyas 98.3 1.3E-05 4.3E-10 74.1 14.8 191 108-319 39-271 (396)
252 1z68_A Fibroblast activation p 98.3 1.3E-06 4.6E-11 89.0 8.8 205 108-319 63-344 (719)
253 3q6k_A 43.2 kDa salivary prote 98.3 0.00015 5.1E-09 71.7 22.8 193 107-311 89-345 (381)
254 4gga_A P55CDC, cell division c 98.3 0.00028 9.6E-09 67.2 24.2 195 94-309 136-340 (420)
255 4gga_A P55CDC, cell division c 98.3 0.00019 6.6E-09 68.4 22.8 197 92-307 93-294 (420)
256 3dm0_A Maltose-binding peripla 98.3 0.00011 3.9E-09 74.9 22.4 184 104-309 430-622 (694)
257 2hz6_A Endoplasmic reticulum t 98.3 1.5E-07 5.1E-12 90.5 0.9 147 115-274 9-158 (369)
258 3vu4_A KMHSV2; beta-propeller 98.3 0.00011 3.7E-09 69.0 20.6 186 107-310 22-216 (355)
259 3azo_A Aminopeptidase; POP fam 98.3 2.4E-05 8.2E-10 78.7 17.1 197 110-319 82-323 (662)
260 3lrv_A PRE-mRNA-splicing facto 98.2 0.00012 4.2E-09 67.7 20.3 168 129-309 105-280 (343)
261 3dwl_C Actin-related protein 2 98.2 5.4E-06 1.8E-10 76.6 11.1 199 108-315 15-230 (377)
262 2pm7_B Protein transport prote 98.2 0.00034 1.2E-08 63.5 22.3 194 106-319 11-236 (297)
263 2oaj_A Protein SNI1; WD40 repe 98.2 0.00014 4.8E-09 78.0 22.5 218 94-319 50-310 (902)
264 4h5i_A Guanine nucleotide-exch 98.2 0.00024 8.2E-09 67.2 21.5 164 93-265 167-343 (365)
265 3c5m_A Oligogalacturonate lyas 98.2 7.2E-05 2.5E-09 69.0 17.5 183 126-321 166-384 (396)
266 2g8s_A Glucose/sorbosone dehyd 98.2 6.2E-05 2.1E-09 72.2 16.8 163 95-264 118-353 (353)
267 4ggc_A P55CDC, cell division c 98.1 0.0012 4.1E-08 58.6 23.8 201 94-315 56-267 (318)
268 4e54_B DNA damage-binding prot 98.1 3.7E-05 1.3E-09 73.8 14.8 189 106-313 211-422 (435)
269 3jro_A Fusion protein of prote 98.1 8.5E-05 2.9E-09 77.5 18.5 195 107-320 12-237 (753)
270 3fm0_A Protein CIAO1; WDR39,SG 98.1 0.00081 2.8E-08 62.5 23.2 188 104-309 61-272 (345)
271 3ii7_A Kelch-like protein 7; p 98.1 0.0014 4.8E-08 59.8 24.5 182 109-310 50-256 (306)
272 4e54_B DNA damage-binding prot 98.1 2E-05 6.9E-10 75.7 12.4 194 100-314 117-320 (435)
273 2xn4_A Kelch-like protein 2; s 98.1 0.0015 5.2E-08 59.5 24.4 197 93-311 42-261 (302)
274 3s25_A Hypothetical 7-bladed b 98.1 0.00025 8.7E-09 67.1 19.6 179 109-320 19-215 (302)
275 4ggc_A P55CDC, cell division c 98.1 0.00053 1.8E-08 61.0 20.5 182 106-305 27-212 (318)
276 2hes_X YDR267CP; beta-propelle 98.1 0.0028 9.7E-08 58.4 26.1 200 93-316 4-225 (330)
277 3iuj_A Prolyl endopeptidase; h 98.1 0.00023 7.8E-09 73.6 20.5 184 107-309 131-345 (693)
278 2vpj_A Kelch-like protein 12; 98.1 0.0019 6.3E-08 58.7 24.4 183 109-311 57-263 (301)
279 2hz6_A Endoplasmic reticulum t 98.1 9.6E-07 3.3E-11 84.8 2.0 153 114-274 47-201 (369)
280 2gop_A Trilobed protease; beta 98.0 0.00046 1.6E-08 62.9 19.1 147 108-268 62-254 (347)
281 2oit_A Nucleoporin 214KDA; NH2 98.0 0.0001 3.4E-09 72.3 15.3 211 96-318 86-330 (434)
282 4a5s_A Dipeptidyl peptidase 4 98.0 3.9E-05 1.3E-09 79.5 12.9 206 108-319 65-351 (740)
283 2j04_A TAU60, YPL007P, hypothe 98.0 0.00014 4.8E-09 75.6 16.6 180 105-308 16-243 (588)
284 3bg1_A Protein SEC13 homolog; 98.0 0.00027 9.2E-09 65.0 16.2 206 95-319 4-245 (316)
285 1cru_A Protein (soluble quinop 98.0 0.00016 5.3E-09 72.3 15.6 152 152-318 29-255 (454)
286 1yr2_A Prolyl oligopeptidase; 97.9 0.0024 8E-08 66.2 25.0 195 108-319 212-439 (741)
287 2bkl_A Prolyl endopeptidase; m 97.9 0.00063 2.1E-08 69.9 20.5 194 108-319 171-395 (695)
288 3jro_A Fusion protein of prote 97.9 0.00019 6.4E-09 74.9 16.6 212 93-319 43-283 (753)
289 3ii7_A Kelch-like protein 7; p 97.9 0.0026 9E-08 58.0 22.3 148 116-268 12-181 (306)
290 2gop_A Trilobed protease; beta 97.9 0.0017 5.7E-08 59.2 20.8 162 127-318 42-250 (347)
291 2vpj_A Kelch-like protein 12; 97.9 0.0025 8.6E-08 57.9 21.4 168 93-268 93-281 (301)
292 2j04_A TAU60, YPL007P, hypothe 97.9 0.001 3.4E-08 69.2 20.8 180 104-310 85-288 (588)
293 1yr2_A Prolyl oligopeptidase; 97.9 0.001 3.5E-08 69.0 20.2 190 108-318 166-392 (741)
294 2xn4_A Kelch-like protein 2; s 97.8 0.0018 6.3E-08 58.9 19.8 168 92-267 88-278 (302)
295 3das_A Putative oxidoreductase 97.8 0.0066 2.3E-07 59.0 24.6 202 108-321 35-292 (347)
296 1zgk_A Kelch-like ECH-associat 97.8 0.0024 8.4E-08 58.6 20.3 182 109-310 65-271 (308)
297 2bkl_A Prolyl endopeptidase; m 97.8 0.00058 2E-08 70.2 17.5 183 107-309 123-337 (695)
298 3iuj_A Prolyl endopeptidase; h 97.8 0.0028 9.4E-08 65.5 22.3 193 108-319 178-403 (693)
299 2hes_X YDR267CP; beta-propelle 97.8 0.0055 1.9E-07 56.4 22.2 164 94-266 47-231 (330)
300 3das_A Putative oxidoreductase 97.8 0.0011 3.7E-08 64.6 17.9 200 108-319 83-346 (347)
301 2pm7_B Protein transport prote 97.8 0.0029 1E-07 57.3 19.7 195 95-309 45-274 (297)
302 2oit_A Nucleoporin 214KDA; NH2 97.8 0.00068 2.3E-08 66.3 16.4 190 106-300 151-370 (434)
303 2j04_B YDR362CP, TAU91; beta p 97.8 0.0012 4.1E-08 66.8 18.7 190 98-307 202-415 (524)
304 3s25_A Hypothetical 7-bladed b 97.8 0.0045 1.5E-07 58.5 21.4 180 109-320 108-292 (302)
305 4a2l_A BT_4663, two-component 97.7 0.0034 1.2E-07 65.5 22.1 188 106-318 407-611 (795)
306 4a5s_A Dipeptidyl peptidase 4 97.7 0.001 3.5E-08 68.9 17.6 110 108-223 20-145 (740)
307 1zgk_A Kelch-like ECH-associat 97.7 0.0028 9.5E-08 58.3 18.3 155 109-269 116-291 (308)
308 2woz_A Kelch repeat and BTB do 97.6 0.0027 9.1E-08 58.5 16.8 157 108-270 103-292 (318)
309 3v9f_A Two-component system se 97.6 0.003 1E-07 65.7 19.0 184 106-308 364-556 (781)
310 3v9f_A Two-component system se 97.6 0.0034 1.2E-07 65.4 19.2 190 106-318 408-608 (781)
311 2woz_A Kelch repeat and BTB do 97.6 0.0079 2.7E-07 55.3 19.8 149 114-267 55-233 (318)
312 4asc_A Kelch repeat and BTB do 97.6 0.0025 8.5E-08 58.6 16.3 156 109-270 93-282 (315)
313 4a2l_A BT_4663, two-component 97.6 0.0072 2.5E-07 63.0 21.6 179 106-308 453-648 (795)
314 3sbq_A Nitrous-oxide reductase 97.6 0.00021 7.2E-09 74.2 9.7 141 128-274 217-427 (638)
315 4asc_A Kelch repeat and BTB do 97.6 0.0055 1.9E-07 56.3 18.5 150 114-268 44-224 (315)
316 1k3i_A Galactose oxidase precu 97.6 0.0014 4.9E-08 67.3 15.8 173 95-269 233-445 (656)
317 2uvk_A YJHT; unknown function, 97.5 0.013 4.4E-07 54.6 20.4 153 110-267 14-230 (357)
318 3sbq_A Nitrous-oxide reductase 97.4 0.0037 1.3E-07 65.0 17.0 192 118-329 72-362 (638)
319 2w18_A PALB2, fancn, partner a 97.4 0.011 3.9E-07 57.8 19.6 149 108-262 182-354 (356)
320 1cru_A Protein (soluble quinop 97.3 0.0051 1.8E-07 61.3 15.5 112 90-208 16-162 (454)
321 2uvk_A YJHT; unknown function, 97.2 0.01 3.5E-07 55.3 15.6 143 128-274 168-351 (357)
322 2zwa_A Leucine carboxyl methyl 97.1 0.038 1.3E-06 57.7 20.8 204 108-320 443-693 (695)
323 3q6k_A 43.2 kDa salivary prote 97.1 0.038 1.3E-06 54.5 18.9 154 94-252 136-341 (381)
324 1k3i_A Galactose oxidase precu 97.0 0.008 2.7E-07 61.7 14.3 197 108-319 290-544 (656)
325 3bg1_A Protein SEC13 homolog; 96.9 0.03 1E-06 51.1 16.0 191 95-309 49-282 (316)
326 3ott_A Two-component system se 96.9 0.074 2.5E-06 55.0 20.8 193 104-317 21-216 (758)
327 4a9v_A PHOX; hydrolase, beta-p 96.8 0.0066 2.3E-07 63.1 11.8 107 190-308 385-549 (592)
328 4gq1_A NUP37; propeller, trans 96.8 0.06 2E-06 50.9 17.5 204 114-319 99-346 (393)
329 2j04_B YDR362CP, TAU91; beta p 96.8 0.012 4.1E-07 59.4 13.2 117 107-227 269-394 (524)
330 3ott_A Two-component system se 96.7 0.41 1.4E-05 49.4 24.1 185 105-317 63-256 (758)
331 1xip_A Nucleoporin NUP159; bet 96.7 0.22 7.6E-06 48.8 20.8 176 108-306 41-230 (388)
332 2xe4_A Oligopeptidase B; hydro 96.5 0.044 1.5E-06 57.4 15.5 153 108-266 177-355 (751)
333 2zwa_A Leucine carboxyl methyl 96.5 0.058 2E-06 56.3 16.2 158 109-267 391-579 (695)
334 3s9j_A Member of DUF4221 famil 95.8 0.46 1.6E-05 46.4 17.7 116 161-278 41-188 (369)
335 2wg3_C Hedgehog-interacting pr 95.7 0.096 3.3E-06 52.5 12.9 109 153-265 17-186 (463)
336 2be1_A Serine/threonine-protei 95.6 0.052 1.8E-06 52.5 10.2 115 159-275 10-140 (339)
337 3s9j_A Member of DUF4221 famil 95.5 0.45 1.5E-05 46.5 16.2 152 114-273 36-235 (369)
338 2xe4_A Oligopeptidase B; hydro 95.4 0.35 1.2E-05 50.5 16.4 162 105-269 271-462 (751)
339 2be1_A Serine/threonine-protei 94.8 0.076 2.6E-06 51.4 8.4 112 115-229 10-140 (339)
340 1xip_A Nucleoporin NUP159; bet 94.2 1.2 4.1E-05 43.5 15.4 132 155-317 45-187 (388)
341 2wg3_C Hedgehog-interacting pr 94.0 4.9 0.00017 40.0 19.7 206 108-318 72-370 (463)
342 3elq_A Arylsulfate sulfotransf 90.9 3.6 0.00012 42.6 14.3 139 172-318 177-382 (571)
343 3elq_A Arylsulfate sulfotransf 86.0 16 0.00056 37.7 15.2 75 195-272 255-391 (571)
344 4hvt_A Ritya.17583.B, post-pro 85.5 13 0.00046 39.0 14.7 152 108-266 132-330 (711)
345 4hvt_A Ritya.17583.B, post-pro 83.9 30 0.001 36.3 16.4 194 108-318 188-427 (711)
346 3zwu_A Alkaline phosphatase PH 78.4 16 0.00055 37.8 11.8 62 190-255 477-552 (592)
347 3j20_E 30S ribosomal protein S 77.4 10 0.00035 35.1 9.0 45 225-274 129-179 (243)
348 4a9v_A PHOX; hydrolase, beta-p 73.8 6.4 0.00022 40.9 7.3 60 107-166 478-549 (592)
349 3zwu_A Alkaline phosphatase PH 73.4 58 0.002 33.6 14.4 55 241-307 481-548 (592)
350 1tl2_A L10, protein (tachylect 71.9 5.3 0.00018 36.8 5.6 109 193-321 45-162 (236)
351 1tl2_A L10, protein (tachylect 63.4 35 0.0012 31.3 9.2 66 105-178 42-115 (236)
352 3kbg_A 30S ribosomal protein S 62.9 32 0.0011 31.2 8.7 61 209-274 72-139 (213)
353 3npe_A 9-CIS-epoxycarotenoid d 61.1 1E+02 0.0034 31.2 13.1 96 132-230 379-508 (529)
354 3kvc_A Retinoid isomerohydrola 57.4 25 0.00085 35.6 7.8 14 128-141 445-458 (533)
355 1s1d_A Apyrase; adpase, five-b 57.3 74 0.0025 30.6 10.5 92 203-311 64-163 (331)
356 3hx6_A Type 4 fimbrial biogene 50.4 73 0.0025 32.9 9.9 98 170-268 164-287 (570)
357 2zux_A YESW protein; beta-prop 50.3 2.3E+02 0.008 29.3 13.9 102 126-228 149-310 (591)
358 3ei3_A DNA damage-binding prot 49.8 3E+02 0.01 30.4 22.1 107 159-274 483-600 (1158)
359 3npe_A 9-CIS-epoxycarotenoid d 43.8 66 0.0023 32.6 8.4 72 118-189 418-507 (529)
360 1iz6_A Initiation factor 5A; S 38.7 1.7E+02 0.0057 24.3 9.4 83 98-183 4-97 (138)
361 2biw_A Apocarotenoid-cleaving 37.3 58 0.002 32.5 6.7 20 128-148 401-420 (490)
362 1bkb_A Translation initiation 37.1 1.7E+02 0.0057 24.1 8.6 82 98-182 6-98 (136)
363 2rqw_B 24-meric peptide from s 36.2 19 0.00064 22.1 1.7 12 19-30 11-22 (26)
364 2zux_A YESW protein; beta-prop 34.6 2.7E+02 0.0093 28.8 11.2 22 126-147 227-248 (591)
365 3ei3_A DNA damage-binding prot 32.7 5.4E+02 0.018 28.4 26.5 176 127-321 806-999 (1158)
366 2xzh_A Clathrin heavy chain 1; 29.9 2.5E+02 0.0086 27.3 9.5 72 103-178 258-331 (365)
367 2xzh_A Clathrin heavy chain 1; 26.7 4.5E+02 0.015 25.5 12.9 74 109-188 30-105 (365)
368 3hks_A EIF-5A-2, eukaryotic tr 26.2 3E+02 0.01 23.7 8.6 48 97-144 25-81 (167)
369 2hc5_A ORF 99, hypothetical pr 25.6 43 0.0015 27.4 2.8 17 258-274 71-87 (117)
370 3u5c_E RP5, S7, YS6, 40S ribos 24.1 84 0.0029 29.3 4.9 46 224-274 127-175 (261)
371 1bpo_A Protein (clathrin); cla 23.9 5.7E+02 0.02 25.8 13.3 74 109-188 29-104 (494)
372 2k89_A PLA2P, PLAP, phospholip 23.8 31 0.001 26.6 1.5 40 301-341 7-50 (80)
373 2eif_A IF-5A, protein (eukaryo 23.1 3.1E+02 0.011 22.5 10.3 84 98-183 8-101 (136)
374 3iz6_D 40S ribosomal protein S 22.4 85 0.0029 29.3 4.5 46 224-274 127-175 (265)
375 2kxc_B ESPF-like protein; IRTK 22.4 52 0.0018 23.0 2.3 19 16-34 27-45 (48)
376 2wme_A BADH, betaine aldehyde 22.2 60 0.0021 32.4 3.8 33 243-276 10-42 (490)
377 3hx6_A Type 4 fimbrial biogene 21.8 6.6E+02 0.023 25.7 13.9 102 118-221 155-286 (570)
378 2hc5_A ORF 99, hypothetical pr 21.4 58 0.002 26.6 2.8 35 105-146 53-87 (117)
379 2biw_A Apocarotenoid-cleaving 21.3 2.5E+02 0.0086 27.8 8.1 58 213-272 350-417 (490)
No 1
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=100.00 E-value=6.5e-70 Score=510.64 Aligned_cols=239 Identities=42% Similarity=0.731 Sum_probs=223.9
Q ss_pred CCCceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEE
Q 019103 86 QSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQV 165 (346)
Q Consensus 86 ~~~~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~l 165 (346)
..++.++++|+++||||+.+|||||+|++ ++||||||+||+|+|+++|++||++++++++++.+||||+++++++|||+
T Consensus 2 ~~~~~~~~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~l 80 (243)
T 3mbr_X 2 DPVPTQGYRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQL 80 (243)
T ss_dssp -CCCBCCEEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CCCcccceEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEE
Confidence 46788999999999999999999999995 89999999999999999999999999999999999999999999999999
Q ss_pred EeeCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeC
Q 019103 166 TWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK 245 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~ 245 (346)
||+++.++|||++|++++++|+++ ++||||++|+++||||||+++|+++||+|++++++|+|+.+|+|+.++||||+++
T Consensus 81 tw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~ 159 (243)
T 3mbr_X 81 TWRNHEGFVYDLATLTPRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVN 159 (243)
T ss_dssp ESSSSEEEEEETTTTEEEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EeeCCEEEEEECCcCcEEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeC
Confidence 999999999999999999999998 6999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeecccc
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMKRE 325 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~~~ 325 (346)
|+||||+|++|+|++|||+||+|+++|++++|.+.....+.+.++|||||||||++++||||||+||+||||+|.++...
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~~~~~ 239 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTPLPHA 239 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECCCCC-
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEecCCcc
Confidence 99999999999999999999999999999888765321112567899999999999999999999999999999986655
Q ss_pred c
Q 019103 326 R 326 (346)
Q Consensus 326 ~ 326 (346)
+
T Consensus 240 ~ 240 (243)
T 3mbr_X 240 A 240 (243)
T ss_dssp -
T ss_pred c
Confidence 4
No 2
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=100.00 E-value=6.3e-68 Score=501.95 Aligned_cols=235 Identities=43% Similarity=0.787 Sum_probs=222.3
Q ss_pred CCCCceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEE
Q 019103 85 DQSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQ 164 (346)
Q Consensus 85 ~~~~~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ 164 (346)
...++.++++|+++||||+++|||||+|+ |++||||+|+||+|+|+++|++|||+++++++++++||||+++++++|||
T Consensus 23 ~~~~~~~~~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ 101 (262)
T 3nol_A 23 TPSIPIYDYQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVG 101 (262)
T ss_dssp --CCCEEEEEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEE
T ss_pred CCCCcccceEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEE
Confidence 45788999999999999999999999999 68999999999999999999999999999999999999999999999999
Q ss_pred EEeeCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee
Q 019103 165 VTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (346)
Q Consensus 165 ltw~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~ 244 (346)
+||+++.++|||++|++++++|+++ ++||||++|+++||+|||+++|++|||+|++++++|+|+.+|+|+.++||||++
T Consensus 102 ltw~~~~v~v~D~~t~~~~~ti~~~-~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRSFNYD-GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEEEECS-SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEeeCCEEEEEECccCcEEEEEECC-CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 9999999999999999999999998 699999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeec
Q 019103 245 KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREM 322 (346)
Q Consensus 245 ~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~ 322 (346)
+|+||||+|++|+|++|||+||+|+++|++++|.+.... ..+.++|||||||||++++||||||+||+||||+|.+.
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~-~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~~~ 257 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP-LPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLTQR 257 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS-CCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc-ccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEecC
Confidence 999999999999999999999999999999888764310 13557899999999999999999999999999999874
No 3
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=100.00 E-value=6.8e-65 Score=482.31 Aligned_cols=229 Identities=34% Similarity=0.602 Sum_probs=214.2
Q ss_pred CCceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEE
Q 019103 87 SPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVT 166 (346)
Q Consensus 87 ~~~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~lt 166 (346)
.|-.-..+|+++||||+++|||||+|+ +++||||+|+|| +|+++|++|||+++++ +++.+||||+++++++|||+|
T Consensus 37 ~~~~~~~~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g--~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~lt 112 (268)
T 3nok_A 37 EPVRRVAHIIREYPHATNAFTQGLVFH-QGHFFESTGHQG--TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLT 112 (268)
T ss_dssp CCEEEEEEEEEEEECCTTCCEEEEEEE-TTEEEEEETTTT--EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEE
T ss_pred CccccceEEEEEEcCCCccccceEEEE-CCEEEEEcCCCC--EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEE
Confidence 344556799999999999999999998 589999999888 4999999999999999 999999999999999999999
Q ss_pred eeCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCC
Q 019103 167 WLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKG 246 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G 246 (346)
|+++.++|||++|++++++|+++ ++||||++||++||+|||+++|++|||+|++++++|+|+.+|+++.++||||+++|
T Consensus 113 w~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG 191 (268)
T 3nok_A 113 WTEGLLFTWSGMPPQRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANG 191 (268)
T ss_dssp SSSCEEEEEETTTTEEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred ccCCEEEEEECCcCcEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCC
Confidence 99999999999999999999997 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+||||+|++|+|++|||+||+|+++|++++|.+.......+.++|||||||||++++||||||+||+||||+|.
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEEE
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEEE
Confidence 99999999999999999999999999998887653311224578999999999999999999999999999995
No 4
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=100.00 E-value=3.6e-63 Score=469.88 Aligned_cols=252 Identities=67% Similarity=1.219 Sum_probs=235.1
Q ss_pred CCCceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEE
Q 019103 86 QSPSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQV 165 (346)
Q Consensus 86 ~~~~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~l 165 (346)
.+++.++++|+++|||++.+|||||+|++|++||||+|+|++++|+++|++||++++++++++.+||||+++++++||++
T Consensus 2 ~~~~~~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~ 81 (266)
T 2iwa_A 2 PSSRVYIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQV 81 (266)
T ss_dssp CCCCEEEEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE
T ss_pred CCCCccCceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEE
Confidence 46788999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred EeeCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeC
Q 019103 166 TWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK 245 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~ 245 (346)
+|.++.++|||++|++++++|++++|+||||++||++||+|||+++|++|||+|++++++|+|+.+|+|+.++||||+.+
T Consensus 82 t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEEC
Confidence 99999999999999999999998768999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeecccc
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMKRE 325 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~~~ 325 (346)
|+||||+|.+|+|++||++||+|+++|+++++.+.......+..++||||||+|++++||||||+||+||+|+|.+.+.+
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~~~ 241 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVRHR 241 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECCSC
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecccCC
Confidence 99999999999999999999999999999766543111223557899999999999999999999999999999998877
Q ss_pred ccCCCchhHHHhhhhhc
Q 019103 326 RKDGFNVDTIIEQLCLL 342 (346)
Q Consensus 326 ~~~~~~~~~~~~~~~~~ 342 (346)
.+.+ .|||+|+-
T Consensus 242 ~~~~-----~~~~~~~~ 253 (266)
T 2iwa_A 242 IPDG-----YIERHCLN 253 (266)
T ss_dssp CCTT-----HHHHHHSC
T ss_pred cchh-----HHHhhCcc
Confidence 7777 99999963
No 5
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.90 E-value=1.8e-21 Score=183.77 Aligned_cols=187 Identities=12% Similarity=0.096 Sum_probs=155.3
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE-eCCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL-LGEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~-~g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
.+.+++.++ +++||+++. +++.|.++|++|++++.+++....+ .+++. .+++||+++..++.+.++|+++++++
T Consensus 44 ~~~~~i~~~-~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p--~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSP--RYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSE--EEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE-CCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCC--cEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 456899996 589999987 6679999999999999998755554 55666 56799999978999999999999999
Q ss_pred EEEecC-------CCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEec
Q 019103 184 EEFTHQ-------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVW 253 (346)
Q Consensus 184 ~ti~~~-------~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~ 253 (346)
++++.+ .|+|..+ ++++||+++ + +++|++||++|+++++++.++. .| +.+.+. +|++|+..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~--~p----~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI--QP----TSLVMDKYNKMWTITD 190 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS--CB----CCCEECTTSEEEEEBC
T ss_pred EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC--Cc----cceEEcCCCCEEEEEC
Confidence 999975 2454444 899999998 4 8899999999999999999865 23 345555 689999887
Q ss_pred CC----------CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 254 QT----------DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 254 ~s----------n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.. +.|.+||++|++++.++.++. +..|++||++|++++|||++. .+|.+.+
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~------------g~~p~~la~~~d~~~lyv~~~---~v~~~d~ 251 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL------------GDWPSEVQLNGTRDTLYWINN---DIWRMPV 251 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT------------TCCCEEEEECTTSCEEEEESS---SEEEEET
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCC------------CCCceeEEEecCCCEEEEEcc---EEEEEEC
Confidence 65 899999999999999997621 236899999999999999986 8887765
No 6
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.90 E-value=4.1e-22 Score=188.15 Aligned_cols=205 Identities=14% Similarity=0.143 Sum_probs=162.7
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe----eEEEEEEeCCEEEEEEe
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~----FgeGit~~g~~LY~ltw 167 (346)
+.+++++++....| .+++++++++||+++. ..+.|.+||++|+++...++++... .++|++..+++||+++|
T Consensus 73 t~~~~~~i~~~~~p--~~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~ 148 (328)
T 3dsm_A 73 TFKEVGRITGFTSP--RYIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW 148 (328)
T ss_dssp TCCEEEEEECCSSE--EEEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC
T ss_pred ccEEEEEcCCCCCC--cEEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC
Confidence 56788888876566 7999988899999985 3579999999999999999887621 45778889999999999
Q ss_pred -eCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECCC----------CeEEEEeCCCCcEEEEEEeccCCeee
Q 019103 168 -LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGS----------SMLYQIDPQTLKVIRKDIVRYKGREV 235 (346)
Q Consensus 168 -~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs----------~~l~vIDp~T~kvi~~I~V~~~G~pv 235 (346)
.++.+.+||+++++++++++.+ .|.+..+++||+.++++.+. +.|++||++|+++++++.+.....|
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p- 227 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWP- 227 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCC-
T ss_pred CCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCc-
Confidence 5999999999999999999986 67888899988744444464 7999999999999999988532233
Q ss_pred eeceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec----C
Q 019103 236 RNLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG----K 309 (346)
Q Consensus 236 ~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG----K 309 (346)
+.|.+. +++||+.+. .|.+||++++++... .+.+ ..+..|+|||+||++++|||++ .
T Consensus 228 ---~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~----~~~~-------~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 228 ---SEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR----PFLE-------FRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp ---EEEEECTTSCEEEEESS---SEEEEETTCSSCCSS----CSBC-------CCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred ---eeEEEecCCCEEEEEcc---EEEEEECCCCceeee----eeec-------CCCCceEEEEEcCCCCeEEEEcccccc
Confidence 457666 568999864 899999999997421 1100 0145799999999999999998 5
Q ss_pred CCCcEEEEE
Q 019103 310 LWPKLYEIN 318 (346)
Q Consensus 310 ~Wp~l~ev~ 318 (346)
.-++|+.+.
T Consensus 291 ~~~~V~v~d 299 (328)
T 3dsm_A 291 QQGIVYRYS 299 (328)
T ss_dssp SEEEEEEEC
T ss_pred cCCEEEEEC
Confidence 556777664
No 7
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.88 E-value=3e-21 Score=193.26 Aligned_cols=190 Identities=10% Similarity=-0.008 Sum_probs=154.3
Q ss_pred CEEEEEcCCCCC--CeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe---------eCCEEEEEECCCCcEEE
Q 019103 116 DTLFESTGLYGR--SSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 116 ~~LyeStGlyg~--s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw---------~~~~v~V~D~~tl~~i~ 184 (346)
.++|+++...+. +.|.+||++|++++.+++++..+ +..++.++++||++++ .++.|.|||+.|+++++
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 379999873322 79999999999999999999988 8777788999999996 57889999999999999
Q ss_pred EEecC---------CCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEEEEeccC-----------------Ce---
Q 019103 185 EFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYK-----------------GR--- 233 (346)
Q Consensus 185 ti~~~---------~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~I~V~~~-----------------G~--- 233 (346)
+|+++ .|++..+++||++||++| . ++.|.+||++|++++++|+|+.. |+
T Consensus 164 ~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~ 243 (426)
T 3c75_H 164 DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLAR 243 (426)
T ss_dssp EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEE
Confidence 99874 478999999999999998 3 78999999999999999998310 00
Q ss_pred -------ee------------------------------------eecee------------------------------
Q 019103 234 -------EV------------------------------------RNLNE------------------------------ 240 (346)
Q Consensus 234 -------pv------------------------------------~~lNE------------------------------ 240 (346)
.. .-++.
T Consensus 244 V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~ 323 (426)
T 3c75_H 244 VDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQ 323 (426)
T ss_dssp EECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSC
T ss_pred EECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCcee
Confidence 00 00000
Q ss_pred eEe--eCCEEEEEec---------CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC-EEEEec
Q 019103 241 LEF--IKGEVWANVW---------QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN-RIFVTG 308 (346)
Q Consensus 241 LE~--~~G~LyaNv~---------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~LfVTG 308 (346)
+.+ .++++||++. .+++|+|||++|++|+++|+++ ..|+||+++||++ ++||++
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg--------------~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG--------------HEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--------------EEECEEEECCSSSCEEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC--------------CCcCeEEEccCCCEEEEEEc
Confidence 111 1368999774 2578999999999999999762 2589999999999 999998
Q ss_pred CCCCcEEEEEEe
Q 019103 309 KLWPKLYEINLR 320 (346)
Q Consensus 309 K~Wp~l~ev~l~ 320 (346)
...+.|..|.+.
T Consensus 390 ~~s~~VsVID~~ 401 (426)
T 3c75_H 390 AGTQTLHIYDAA 401 (426)
T ss_dssp TTTTEEEEEETT
T ss_pred CCCCeEEEEECC
Confidence 888999999873
No 8
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=4e-19 Score=163.01 Aligned_cols=208 Identities=17% Similarity=0.249 Sum_probs=170.0
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe--------eEEEEEE--eCC
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSY--------FGEGLTL--LGE 160 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~--------FgeGit~--~g~ 160 (346)
+.+++.+++.+..+ .++.+++||+ +|+++. +++.|.+||+++++++..+.++... ...+++. +++
T Consensus 78 ~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 153 (353)
T 3vgz_A 78 TLEVTQAIHNDLKP--FGATINNTTQTLWFGNT--VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN 153 (353)
T ss_dssp TCCEEEEEEESSCC--CSEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT
T ss_pred CCeEEEEEecCCCc--ceEEECCCCCEEEEEec--CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC
Confidence 45677888876666 6999999884 999877 5679999999999999999885421 1344555 678
Q ss_pred EEEEEEee-CCEEEEEECCCCcEEEEEe-cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeee
Q 019103 161 KLFQVTWL-QKTGFIYDQNNLNKLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (346)
Q Consensus 161 ~LY~ltw~-~~~v~V~D~~tl~~i~ti~-~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~ 237 (346)
++|++++. ++.++++|.++++.+.+++ .+ .+.+..+++||++||+++.++.|+++|+++++++.++.++..|.. ..
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~ 232 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKE-HF 232 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSC-CC
T ss_pred EEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCC-cc
Confidence 99999974 7889999999999999998 44 478889999999999999999999999999999999988544321 23
Q ss_pred ceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 238 LNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 238 lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
.+.+.+. ++++|+.....+.|.++|+++++++..+.++. +.+++|+|+++++||++..-+.|+
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------------~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---------------SLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---------------CCCEEEETTTTEEEEEETTTTEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---------------CceEEECCCCCEEEEEECCCCeEE
Confidence 3445555 45899999888999999999999999997521 267999999999999998888888
Q ss_pred EEEE
Q 019103 316 EINL 319 (346)
Q Consensus 316 ev~l 319 (346)
.+.+
T Consensus 298 ~~d~ 301 (353)
T 3vgz_A 298 VIDA 301 (353)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8875
No 9
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=3.6e-19 Score=163.29 Aligned_cols=206 Identities=14% Similarity=0.105 Sum_probs=166.0
Q ss_pred EEEEecCCCCcceeEEEecCC-EEEEEcCCC----CCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC
Q 019103 96 VNEFPHDPRAFTQGLLYAEND-TLFESTGLY----GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~-~LyeStGly----g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~ 170 (346)
+.+.++...+ .++++++|+ .||+++... .++.|.+||+++++++..++.+..+.+..++.+++++|+++..++
T Consensus 34 ~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 34 MLRKAVGKGA--YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp EEEEEEESSE--EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT
T ss_pred hhhhhhccCc--cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC
Confidence 4455666666 599999987 788887521 157999999999999999998887777777777889999999999
Q ss_pred EEEEEECCCCcEEEEEecCC-----------CceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEEEE-eccCCeeee
Q 019103 171 TGFIYDQNNLNKLEEFTHQM-----------KDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDI-VRYKGREVR 236 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~~-----------peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~I~-V~~~G~pv~ 236 (346)
.+.++|.++++.+.+++.+. +.+..+++||+++|+++ + ++.|+++|+++++++..+. .+.. +
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~-- 187 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM--S-- 187 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--C--
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--c--
Confidence 99999999999999998742 45677899999999988 4 6789999999999998887 3321 2
Q ss_pred eceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 237 NLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 237 ~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
+.+.+. +++||+... .+.|.++|+++++++..+....- .....+++|+++|+++++|+++..-+.|
T Consensus 188 --~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~l~~~~~~~~~v 255 (353)
T 3vgz_A 188 --TGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDD---------GKEHFFINISLDTARQRAFITDSKAAEV 255 (353)
T ss_dssp --CCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCS---------SSCCCEEEEEEETTTTEEEEEESSSSEE
T ss_pred --ceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCC---------CCCcccceEEECCCCCEEEEEeCCCCEE
Confidence 234444 457999876 78999999999999999976321 1123689999999999999999888888
Q ss_pred EEEEE
Q 019103 315 YEINL 319 (346)
Q Consensus 315 ~ev~l 319 (346)
+.+.+
T Consensus 256 ~~~d~ 260 (353)
T 3vgz_A 256 LVVDT 260 (353)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 88875
No 10
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.83 E-value=1.1e-19 Score=182.05 Aligned_cols=173 Identities=12% Similarity=-0.045 Sum_probs=142.3
Q ss_pred eeeEEEEEEecCCCCcceeEEEecCC-EEEEEcCC-------CCCCeEEEEECCCCcEEEEeccC--------CCeeEEE
Q 019103 91 YTIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-------YGRSSVRRVALETGKVEAINQME--------GSYFGEG 154 (346)
Q Consensus 91 ~t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGl-------yg~s~V~~iDl~Tgkv~~~~~l~--------~~~FgeG 154 (346)
.+.+++.++|.+..| |+++++|| +||+++.. .+.+.|.+||+.|++++++++++ ..+.+..
T Consensus 107 ~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~ 183 (426)
T 3c75_H 107 STGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNA 183 (426)
T ss_dssp TTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSE
T ss_pred CCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEE
Confidence 378999999997766 99999998 59999731 12468999999999999999886 3455666
Q ss_pred EEEeCCEEEEEEee-CCEEEEEECCCCcEEEEEecCC-------------------------------------------
Q 019103 155 LTLLGEKLFQVTWL-QKTGFIYDQNNLNKLEEFTHQM------------------------------------------- 190 (346)
Q Consensus 155 it~~g~~LY~ltw~-~~~v~V~D~~tl~~i~ti~~~~------------------------------------------- 190 (346)
++.+|++||++++. ++.|.|||+++++++++|+++.
T Consensus 184 ~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 184 LTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 67789999999986 8999999999999999887620
Q ss_pred ------------------------------------------------------Cce---eEEeeCCCEEEEEC------
Q 019103 191 ------------------------------------------------------KDG---WGLATDGKVLFGSD------ 207 (346)
Q Consensus 191 ------------------------------------------------------peG---wGLt~Dg~~LyvSd------ 207 (346)
|.| .++++|+++||+++
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 112 45677889999986
Q ss_pred ----CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CC-EEEEEecCCCeEEEEeCCCCeEEEEE
Q 019103 208 ----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KG-EVWANVWQTDCIARISHEDGVVLGWV 272 (346)
Q Consensus 208 ----Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G-~LyaNv~~sn~I~vID~~TG~Vv~~I 272 (346)
++++|++||++|++++++|+++. .|.. +++. +. ++|+++|.+++|+|||++|++++++|
T Consensus 344 thk~~s~~VsVID~~T~kvv~~I~vg~--~P~g----ia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 344 KHKAASRFVVVLNAETGERINKIELGH--EIDS----INVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEE--EECE----EEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cccCCCCEEEEEECCCCeEEEEEECCC--CcCe----EEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 25789999999999999999976 3433 5554 45 79999999999999999999999998
No 11
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.82 E-value=1e-18 Score=165.17 Aligned_cols=167 Identities=13% Similarity=-0.001 Sum_probs=141.8
Q ss_pred CCcEEEEeccCCCeeEEEEEEeC-CEEEEEEe--eCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCe
Q 019103 137 TGKVEAINQMEGSYFGEGLTLLG-EKLFQVTW--LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSM 211 (346)
Q Consensus 137 Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw--~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~ 211 (346)
+.++++++++++..|.+|+++++ ++||+++- .++.+.++|++|++++++++.+ .+.|-|++.+|++||+++ .++.
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSE
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCE
Confidence 46799999999999999999987 89999984 4799999999999999999985 457778898999999987 6999
Q ss_pred EEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCce
Q 019103 212 LYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDV 291 (346)
Q Consensus 212 l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~v 291 (346)
++++|++|++++++|+++ .+.+.. |.++++++|+++ .++.|.+|||+|.+++.+|.+.. .+. ....
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g~g----lt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~-~~~-------p~~~ 153 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDGWG----LATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKY-NGH-------RVIR 153 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSCCE----EEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEE-TTE-------ECCC
T ss_pred EEEEECCCCcEEEEEECC-CCCeEE----EEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECC-CCc-------cccc
Confidence 999999999999999997 344443 667777999998 59999999999999999998832 111 1235
Q ss_pred eeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 292 LNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 292 lNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
||+++|. + +++|++...-+.|..|..
T Consensus 154 ~nele~~-d-g~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 154 LNELEYI-N-GEVWANIWQTDCIARISA 179 (266)
T ss_dssp EEEEEEE-T-TEEEEEETTSSEEEEEET
T ss_pred ceeEEEE-C-CEEEEecCCCCeEEEEEC
Confidence 8999999 4 499999877789999876
No 12
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.82 E-value=7.1e-18 Score=164.12 Aligned_cols=208 Identities=7% Similarity=-0.082 Sum_probs=149.5
Q ss_pred eeEEEEEEecCCCCcceeEEEecCC-EEEEEcCC-------CCCCeEEEEECCCCcEEEEeccC--------CCeeEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-------YGRSSVRRVALETGKVEAINQME--------GSYFGEGL 155 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGl-------yg~s~V~~iDl~Tgkv~~~~~l~--------~~~FgeGi 155 (346)
+.+++.++|.+..+ |++++||| +||+++-. ..++.|.+||++|++++.+++++ ..+.+..+
T Consensus 56 t~~~~~~i~~g~~p---~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~ 132 (373)
T 2mad_H 56 SGSILGHVNGGFLP---NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN 132 (373)
T ss_pred CCeEEEEecCCCCC---CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE
Confidence 56788999986555 99999998 69999742 13578999999999999999886 23445556
Q ss_pred EEeCCEEEEEEee-CCEEEEEECCCCcEEEE-EecCCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEE-----
Q 019103 156 TLLGEKLFQVTWL-QKTGFIYDQNNLNKLEE-FTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDI----- 227 (346)
Q Consensus 156 t~~g~~LY~ltw~-~~~v~V~D~~tl~~i~t-i~~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~----- 227 (346)
+++|++||+++.. ++.+.||| ++++++++ ++.+ .++.+.+++++.|+++ +++++.+||. +++++.++.
T Consensus 133 spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~ 208 (373)
T 2mad_H 133 TPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP--TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML 208 (373)
T ss_pred CCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC--ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccc
Confidence 6689999999986 79999999 99999999 8874 3455666666666654 4556666666 555543222
Q ss_pred ---------------------------------------------eccC-----C-eeee-eceeeEeeCCEEEEEec--
Q 019103 228 ---------------------------------------------VRYK-----G-REVR-NLNELEFIKGEVWANVW-- 253 (346)
Q Consensus 228 ---------------------------------------------V~~~-----G-~pv~-~lNELE~~~G~LyaNv~-- 253 (346)
+... + .|.. +.-.+...++++||.+-
T Consensus 209 ~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~ 288 (373)
T 2mad_H 209 TAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQ 288 (373)
T ss_pred cCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccC
Confidence 1100 0 0000 00011122468998653
Q ss_pred -------CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC-EEEEecCCCCcEEEEEEe
Q 019103 254 -------QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN-RIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 254 -------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~LfVTGK~Wp~l~ev~l~ 320 (346)
.++.|++||++|++++++|++.. .|+|||++||++ ++|+++...+.|+.|.+.
T Consensus 289 ~~~~~~~~~~~V~VID~~t~~vv~~i~~g~--------------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 289 SAWKLHAAAKEVTSVTGLVGQTSSQISLGH--------------DVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred CcccccCCCCeEEEEECCCCEEEEEEECCC--------------CcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 35789999999999999997622 469999999999 899997777999999874
No 13
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.81 E-value=3.2e-19 Score=175.11 Aligned_cols=185 Identities=6% Similarity=-0.160 Sum_probs=146.8
Q ss_pred CEEEEEcCCCCCC----eEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe---------eCCEEEEEECCCCcE
Q 019103 116 DTLFESTGLYGRS----SVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNK 182 (346)
Q Consensus 116 ~~LyeStGlyg~s----~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw---------~~~~v~V~D~~tl~~ 182 (346)
+++|+++. +.+ .|.+||++|++++.+++++..+ +..++++++++|++++ .++.+.|||+.|+++
T Consensus 32 ~~~yV~~~--~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLP--AYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEEC--TTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECC--ccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 57899987 444 8999999999999999999888 7777778999999995 579999999999999
Q ss_pred EEEEecC---------CCceeEEeeCCCEEEEEC-C-CCeEEE--EeCCCCcEEEEEEecc-------------------
Q 019103 183 LEEFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQ--IDPQTLKVIRKDIVRY------------------- 230 (346)
Q Consensus 183 i~ti~~~---------~peGwGLt~Dg~~LyvSd-G-s~~l~v--IDp~T~kvi~~I~V~~------------------- 230 (346)
+++++.+ .|++.+++|||++|||+| + ++.|.+ ||++| +++|.++.
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTT
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCC
Confidence 9999874 489999999999999998 4 678999 99988 45565421
Q ss_pred -------------CCeee------------------------------eece----e-----------------------
Q 019103 231 -------------KGREV------------------------------RNLN----E----------------------- 240 (346)
Q Consensus 231 -------------~G~pv------------------------------~~lN----E----------------------- 240 (346)
.|+.. ..++ .
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g 265 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG 265 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCc
Confidence 01000 0000 0
Q ss_pred ---eEe--eCCEEEEEec-C-------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 241 ---LEF--IKGEVWANVW-Q-------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 241 ---LE~--~~G~LyaNv~-~-------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
+.+ +++++||+++ + .+.+.|||++|++++++|.++ .-|+||+++||++++|||
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg--------------~~p~gi~~s~Dg~~l~va 331 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--------------HDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--------------EEECEEEECCSSSCEEEE
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC--------------CCcceEEECCCCCEEEEE
Confidence 112 2358999877 3 467889999999999999762 147999999999999999
Q ss_pred cC-CCCcEEEEEEe
Q 019103 308 GK-LWPKLYEINLR 320 (346)
Q Consensus 308 GK-~Wp~l~ev~l~ 320 (346)
+. ..++|.-|.+.
T Consensus 332 ~~~~~~~VsVID~~ 345 (368)
T 1mda_H 332 NSAGTEVLDIYDAA 345 (368)
T ss_dssp EETTTTEEEEEESS
T ss_pred ccCCCCeEEEEECC
Confidence 98 68999999874
No 14
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=4.7e-18 Score=175.10 Aligned_cols=213 Identities=15% Similarity=0.093 Sum_probs=166.5
Q ss_pred eeEEEEEEecCCCCcceeEEEecCC-EEEEEcCCCCCCeEEEEECC--CCcEEEEeccCCCeeEEEEE----EeCCEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALE--TGKVEAINQMEGSYFGEGLT----LLGEKLFQ 164 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~--Tgkv~~~~~l~~~~FgeGit----~~g~~LY~ 164 (346)
+.+++.+++.+..+ .|+.+++|| .||+++. ++.|.+||+. +++++.+++.+..+.+..++ ++|+++|+
T Consensus 186 t~~v~~~i~~g~~p--~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 186 TYEIKTVLDTGYAV--HISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp TCCEEEEEECSSCE--EEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred CCeEEEEEeCCCCc--cceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEE
Confidence 45788899986665 699999998 5888753 4699999996 99999999998877666666 46889999
Q ss_pred EEeeCCEEEEEECCCCcEEEEEecC-C-----------------------------------------------------
Q 019103 165 VTWLQKTGFIYDQNNLNKLEEFTHQ-M----------------------------------------------------- 190 (346)
Q Consensus 165 ltw~~~~v~V~D~~tl~~i~ti~~~-~----------------------------------------------------- 190 (346)
+++..+.+.|+|..|++++++++++ +
T Consensus 261 ~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~ 340 (567)
T 1qks_A 261 GAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA 340 (567)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred EEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeec
Confidence 9999999999999999999998753 1
Q ss_pred ---CceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEe-ccCCeeeeeceeeEeeCCEEEEEe-cCCCeEEEEeCC
Q 019103 191 ---KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIV-RYKGREVRNLNELEFIKGEVWANV-WQTDCIARISHE 264 (346)
Q Consensus 191 ---peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V-~~~G~pv~~lNELE~~~G~LyaNv-~~sn~I~vID~~ 264 (346)
+.+.++++||+++|+++ ++++|.+||++|+++++++.| +...+|-.-.|-.....|.+|++. ..++.|++||++
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 11447889999999987 799999999999999999999 654333222331112247899865 456899999999
Q ss_pred C-------CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC------cEEEEEEeec
Q 019103 265 D-------GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP------KLYEINLREM 322 (346)
Q Consensus 265 T-------G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp------~l~ev~l~~~ 322 (346)
+ .+|+.+|+..+ .-...|+.+|+++++||+..+-| +|..+++...
T Consensus 421 ~~~~~~~~~kvv~~i~~~g-------------~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 421 PEGHPDNAWKILDSFPALG-------------GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTTCTTTBTSEEEEEECSC-------------SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCCCccccCEEEEEEecCC-------------CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 9 78999998732 12355889999999999986544 7777776543
No 15
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.80 E-value=3.5e-18 Score=169.40 Aligned_cols=211 Identities=10% Similarity=0.011 Sum_probs=152.0
Q ss_pred eeEEEEEEecCCCCcceeEEEecCC-EEEEEcCC-----C--CCCeEEEEECCCCcEEEEeccCC--------CeeEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-----Y--GRSSVRRVALETGKVEAINQMEG--------SYFGEGL 155 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGl-----y--g~s~V~~iDl~Tgkv~~~~~l~~--------~~FgeGi 155 (346)
+.+++.++|.+..| +++++||| +||+++.. + ..+.|++||++|++++++++++. .+++..+
T Consensus 68 t~~v~~~I~vG~~P---~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~ 144 (386)
T 3sjl_D 68 AGRVIGMIDGGFLP---NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL 144 (386)
T ss_dssp TTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE
T ss_pred CCeEEEEEECCCCC---cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE
Confidence 68899999998887 59999999 59998731 1 24689999999999999998864 6777778
Q ss_pred EEeCCEEEEEEee-CCEEEEEECCCCcEEEEEecCC-----Cce----eEEeeCCCEEEEECCC-CeE-----EEEeCCC
Q 019103 156 TLLGEKLFQVTWL-QKTGFIYDQNNLNKLEEFTHQM-----KDG----WGLATDGKVLFGSDGS-SML-----YQIDPQT 219 (346)
Q Consensus 156 t~~g~~LY~ltw~-~~~v~V~D~~tl~~i~ti~~~~-----peG----wGLt~Dg~~LyvSdGs-~~l-----~vIDp~T 219 (346)
+.+|++||+++.. ++.|.|+|+++++++++|+++. |+| +.+++||+++|++.++ +++ .++|+.+
T Consensus 145 spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~ 224 (386)
T 3sjl_D 145 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 224 (386)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTT
T ss_pred cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccc
Confidence 8899999999975 8999999999999999998741 333 3577888888886653 454 2333332
Q ss_pred -------------Cc---------------------EEEEEEecc-----CC-eeee-eceeeEeeCCEEEEEec-----
Q 019103 220 -------------LK---------------------VIRKDIVRY-----KG-REVR-NLNELEFIKGEVWANVW----- 253 (346)
Q Consensus 220 -------------~k---------------------vi~~I~V~~-----~G-~pv~-~lNELE~~~G~LyaNv~----- 253 (346)
++ +++++.+.. .| +|-. ++..+....+++|+..-
T Consensus 225 ~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~ 304 (386)
T 3sjl_D 225 EFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 304 (386)
T ss_dssp SCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTT
T ss_pred ccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccccc
Confidence 11 111111000 00 0000 00011122469998653
Q ss_pred ----CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC-EEEEecCCCCcEEEEEE
Q 019103 254 ----QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN-RIFVTGKLWPKLYEINL 319 (346)
Q Consensus 254 ----~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~LfVTGK~Wp~l~ev~l 319 (346)
..++|++||++|++|+.+|++. .-++|||+++|++ +||+|+...+.|+-|..
T Consensus 305 ~hk~~~~~V~viD~~t~kv~~~i~vg--------------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 305 RHKTASRFVVVLDAKTGERLAKFEMG--------------HEIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEE--------------EEECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECC--------------CCcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 2478999999999999999772 2478999999997 99999888899998876
No 16
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=4.5e-18 Score=163.24 Aligned_cols=187 Identities=12% Similarity=0.137 Sum_probs=143.5
Q ss_pred CEEEEEcCCC---CCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe---------eCCEEEEEECCCCcEE
Q 019103 116 DTLFESTGLY---GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLNKL 183 (346)
Q Consensus 116 ~~LyeStGly---g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw---------~~~~v~V~D~~tl~~i 183 (346)
.++|+++... .++.|.+||+++++++.+++.+..+ +..++.++++||++++ .++.|.+||+++++++
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~ 94 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFE 94 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEE
Confidence 3789887522 2459999999999999998887766 5555557899999986 3677999999999999
Q ss_pred EEEecC--------CCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEE-EEecc----------------------
Q 019103 184 EEFTHQ--------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRK-DIVRY---------------------- 230 (346)
Q Consensus 184 ~ti~~~--------~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~-I~V~~---------------------- 230 (346)
++++.+ .|.+..+++||++||++| + +++|.+||+++.+++++ |.++.
T Consensus 95 ~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 95 KEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp EEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSS
T ss_pred EEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCc
Confidence 999852 478899999999999998 4 78999999999999888 44311
Q ss_pred --------CCeee------------------------------------eece---------------------------
Q 019103 231 --------KGREV------------------------------------RNLN--------------------------- 239 (346)
Q Consensus 231 --------~G~pv------------------------------------~~lN--------------------------- 239 (346)
.|+.. ..++
T Consensus 175 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~ 254 (361)
T 2oiz_A 175 LLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPG 254 (361)
T ss_dssp EEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEEC
T ss_pred EEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccC
Confidence 01111 0000
Q ss_pred ---eeEee--CCEEEEEec----------CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEE
Q 019103 240 ---ELEFI--KGEVWANVW----------QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRI 304 (346)
Q Consensus 240 ---ELE~~--~G~LyaNv~----------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~L 304 (346)
.+.+. ++++||.+. .+++|.+||++|++++++|++. . ++|||++|++++|
T Consensus 255 g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~--------------~-p~~ia~spdg~~l 319 (361)
T 2oiz_A 255 GYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR--------------D-ALSMTIDQQRNLM 319 (361)
T ss_dssp CSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT--------------T-CCEEEEETTTTEE
T ss_pred CeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC--------------C-eeEEEECCCCCEE
Confidence 01111 368998764 2568999999999999999661 2 7999999999999
Q ss_pred EEecCCCCcEEEEEEe
Q 019103 305 FVTGKLWPKLYEINLR 320 (346)
Q Consensus 305 fVTGK~Wp~l~ev~l~ 320 (346)
|+++. +.|+.+.+.
T Consensus 320 ~v~n~--~~v~v~D~~ 333 (361)
T 2oiz_A 320 LTLDG--GNVNVYDIS 333 (361)
T ss_dssp EEECS--SCEEEEECS
T ss_pred EEeCC--CeEEEEECC
Confidence 99984 999988653
No 17
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=7.8e-18 Score=161.59 Aligned_cols=186 Identities=9% Similarity=-0.033 Sum_probs=143.3
Q ss_pred eeEEEEEEecCCCCcceeEEEecCC-EEEEEcCC-----C--CCCeEEEEECCCCcEEEEeccCC-------CeeEEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-----Y--GRSSVRRVALETGKVEAINQMEG-------SYFGEGLT 156 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGl-----y--g~s~V~~iDl~Tgkv~~~~~l~~-------~~FgeGit 156 (346)
+-+++.++|.+..| ++++++|| +||+++.. . .++.|.+||++++++++++++++ .+.+..++
T Consensus 40 t~~~~~~i~~g~~p---~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~s 116 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG---HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQT 116 (361)
T ss_dssp TCCEEEEEECCEEE---EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred CCeEEEEecCCCCC---ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEEC
Confidence 34567888876544 99999998 69998621 1 24679999999999999998753 34455556
Q ss_pred EeCCEEEEEEee-CCEEEEEECCCCcEEEE-EecCC--------------------------------------------
Q 019103 157 LLGEKLFQVTWL-QKTGFIYDQNNLNKLEE-FTHQM-------------------------------------------- 190 (346)
Q Consensus 157 ~~g~~LY~ltw~-~~~v~V~D~~tl~~i~t-i~~~~-------------------------------------------- 190 (346)
.+|++||++++. ++.+.|||.++++++++ ++++.
T Consensus 117 pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~ 196 (361)
T 2oiz_A 117 TDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMF 196 (361)
T ss_dssp TTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCS
T ss_pred CCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceE
Confidence 678999999986 79999999999888877 33210
Q ss_pred --------------------------------------------------------Cce---eEEeeCCCEEEEECC---
Q 019103 191 --------------------------------------------------------KDG---WGLATDGKVLFGSDG--- 208 (346)
Q Consensus 191 --------------------------------------------------------peG---wGLt~Dg~~LyvSdG--- 208 (346)
|.| .++++|++++|+++.
T Consensus 197 ~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~ 276 (361)
T 2oiz_A 197 SVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDG 276 (361)
T ss_dssp CTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSC
T ss_pred cCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCC
Confidence 112 466788999999742
Q ss_pred --------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCC--eEEEEEECCc
Q 019103 209 --------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDCIARISHEDG--VVLGWVLLPN 276 (346)
Q Consensus 209 --------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG--~Vv~~I~l~~ 276 (346)
+++|++||++|++++++++++. |. .+.+. +.+||++++ ++|.+||++|| +++++|.-
T Consensus 277 ~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~----~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~-- 345 (361)
T 2oiz_A 277 KEGTHKFPAAEIWVMDTKTKQRVARIPGRD---AL----SMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEG-- 345 (361)
T ss_dssp CTTCTTCCCSEEEEEETTTTEEEEEEECTT---CC----EEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETT--
T ss_pred CcccccCCCceEEEEECCCCcEEEEEecCC---ee----EEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEecc--
Confidence 5699999999999999999965 32 35554 458999986 99999999999 99999821
Q ss_pred hhhhhhhccCCCCceeeEEEEeCCCC
Q 019103 277 LRERLVAAGYNGIDVLNGIAWDSNRN 302 (346)
Q Consensus 277 l~~~~~~~~~~~~~vlNGIA~d~~~~ 302 (346)
.+..|++|+++|+|+
T Consensus 346 -----------~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 346 -----------AAEASLQVQFHPVGG 360 (361)
T ss_dssp -----------SCSSEEEEEECCCSC
T ss_pred -----------CCCCcEEEEecCCCC
Confidence 234789999999986
No 18
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.78 E-value=1.4e-18 Score=170.51 Aligned_cols=186 Identities=5% Similarity=-0.171 Sum_probs=142.2
Q ss_pred eeEEEEEEecCCCCcceeEEEecCC-EEEEEcCC-----C--CCCeEEEEECCCCcEEEEeccC--------CCeeEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEND-TLFESTGL-----Y--GRSSVRRVALETGKVEAINQME--------GSYFGEGL 155 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGl-----y--g~s~V~~iDl~Tgkv~~~~~l~--------~~~FgeGi 155 (346)
+.+++.++|.+..| |+.+++|+ +||+++.. + ..+.|.+||+.|++++++++++ ..|.+..+
T Consensus 55 t~~v~~~i~vG~~P---~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 55 CGVTLGHSLGAFLS---LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTEEEEEEEECTTC---EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCeEEEEEeCCCCC---ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 78999999998777 99999998 69999721 1 2579999999999999999887 34556667
Q ss_pred EEeCCEEEEEEee-CCEEEE--EECCCCcEE-------------------------------------------------
Q 019103 156 TLLGEKLFQVTWL-QKTGFI--YDQNNLNKL------------------------------------------------- 183 (346)
Q Consensus 156 t~~g~~LY~ltw~-~~~v~V--~D~~tl~~i------------------------------------------------- 183 (346)
+++|++||++++. ++.+.| +|+++.+.+
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~ 211 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee
Confidence 7788999999987 688888 887551111
Q ss_pred -----------------------------------EEEec--------C-CCce---eEEeeCCCEEEEEC----C----
Q 019103 184 -----------------------------------EEFTH--------Q-MKDG---WGLATDGKVLFGSD----G---- 208 (346)
Q Consensus 184 -----------------------------------~ti~~--------~-~peG---wGLt~Dg~~LyvSd----G---- 208 (346)
++++. + .|.| .++++||++||+++ +
T Consensus 212 vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 212 CSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp BCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred CCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 00000 0 1233 56899999999974 4
Q ss_pred -CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEec-CCCeEEEEeCCCCeEEEEEECCchhhhhhhc
Q 019103 209 -SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVW-QTDCIARISHEDGVVLGWVLLPNLRERLVAA 284 (346)
Q Consensus 209 -s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~-~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~ 284 (346)
++.+.+||++|++++++|+++. .|.. |.+. || ++|++++ .+|+|+|||++|++++++|++.
T Consensus 292 ~~~~~~ViD~~t~~vv~~i~vg~--~p~g----i~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg--------- 356 (368)
T 1mda_H 292 AAENTSSVTASVGQTSGPISNGH--DSDA----IIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD--------- 356 (368)
T ss_dssp CEEEEEEEESSSCCEEECCEEEE--EECE----EEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC---------
T ss_pred cCCCEEEEECCCCeEEEEEECCC--Ccce----EEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC---------
Confidence 4678899999999999999976 3433 6555 45 5887666 7999999999999999999662
Q ss_pred cCCCCceeeEEEEeCC
Q 019103 285 GYNGIDVLNGIAWDSN 300 (346)
Q Consensus 285 ~~~~~~vlNGIA~d~~ 300 (346)
..|.||++.++
T Consensus 357 -----~~P~~i~~~~~ 367 (368)
T 1mda_H 357 -----KGPESLSVQNE 367 (368)
T ss_dssp -----SCCCEEECCCC
T ss_pred -----CCCCEEEeecC
Confidence 25789998754
No 19
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.76 E-value=5e-17 Score=154.13 Aligned_cols=163 Identities=16% Similarity=0.118 Sum_probs=139.3
Q ss_pred cEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEe
Q 019103 139 KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQID 216 (346)
Q Consensus 139 kv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vID 216 (346)
++++.++.+...|.+|+..++++||.++-..+.+.++|++|+++++++ .+ ..-|-|++.++++||+++ .++.++++|
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEE
Confidence 789999999999999999999999999999999999999999999999 75 345677999999999988 599999999
Q ss_pred CCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEE
Q 019103 217 PQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIA 296 (346)
Q Consensus 217 p~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA 296 (346)
++|++++++|++...| .. |.+++++||+++ .++.|.+|||+|++++++|.+.. .+. ....+|++.
T Consensus 123 ~~Tl~~~~ti~~~~eG--wG----Lt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~-~g~-------~v~~lNeLe 187 (268)
T 3nok_A 123 GMPPQRERTTRYSGEG--WG----LCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKL-RGQ-------PVELINELE 187 (268)
T ss_dssp TTTTEEEEEEECSSCC--CC----EEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEE-TTE-------ECCCEEEEE
T ss_pred CCcCcEEEEEeCCCce--eE----EecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCC-CCc-------ccccccccE
Confidence 9999999999996443 33 667788999998 59999999999999999998832 211 133679999
Q ss_pred EeCCCCEEEEecCCCCcEEEEEE
Q 019103 297 WDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 297 ~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|. +| +||++.-.-+.|..|..
T Consensus 188 ~~-dG-~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 188 CA-NG-VIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EE-TT-EEEEEETTCSEEEEECT
T ss_pred Ee-CC-EEEEEECCCCeEEEEeC
Confidence 98 44 89999767788888854
No 20
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.75 E-value=1.4e-16 Score=162.09 Aligned_cols=212 Identities=11% Similarity=0.038 Sum_probs=162.2
Q ss_pred eeEEEEEEecCCCCcceeEEEec----CC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCC----------CeeEEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAE----ND-TLFESTGLYGRSSVRRVALETGKVEAINQMEG----------SYFGEGLT 156 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~----d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~----------~~FgeGit 156 (346)
+.+++.+++++..+ .+++|+| || .||+++- .+++|.+||.+|+++++.+.... .+...++.
T Consensus 211 t~~~~~~i~~g~~p--~~va~sp~~~~dg~~l~v~~~--~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 211 EPTKVAEIKIGIEA--RSVESSKFKGYEDRYTIAGAY--WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp SCEEEEEEECCSEE--EEEEECCSTTCTTTEEEEEEE--ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred CCcEEEEEecCCCc--ceEEeCCCcCCCCCEEEEEEc--cCCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 45788999986666 7999999 88 5888764 56799999999999999987632 22233444
Q ss_pred E--eCCEEEEEEeeCCEEEEEECCCCcEEE--EEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEecc
Q 019103 157 L--LGEKLFQVTWLQKTGFIYDQNNLNKLE--EFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY 230 (346)
Q Consensus 157 ~--~g~~LY~ltw~~~~v~V~D~~tl~~i~--ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~ 230 (346)
. +++++|+....++.+.++|..+.+.+. +++.+ .+.+.+++|||+++|+++ ++++|.++|++|+++++++.++.
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~ 366 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK 366 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC
Confidence 4 478899999999999999999876655 77764 578889999999999976 69999999999999999999975
Q ss_pred CCeeeeeceeeEeeCCEEEEEec-CCCeEEEEeCCC-------CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC
Q 019103 231 KGREVRNLNELEFIKGEVWANVW-QTDCIARISHED-------GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN 302 (346)
Q Consensus 231 ~G~pv~~lNELE~~~G~LyaNv~-~sn~I~vID~~T-------G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 302 (346)
..+|-.-.|-....+|.+||+.. .+++|.+||+++ ++++.++...+ .....|+++|+++
T Consensus 367 ~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-------------~~~~~v~~~pdg~ 433 (543)
T 1nir_A 367 TPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-------------GGSLFIKTHPKSS 433 (543)
T ss_dssp SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-------------SCCCCEECCTTCC
T ss_pred CCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-------------CCceEEEcCCCCC
Confidence 33332122211122478999875 578999999999 99999997632 1235699999999
Q ss_pred EEEEecCC------CCcEEEEEEe
Q 019103 303 RIFVTGKL------WPKLYEINLR 320 (346)
Q Consensus 303 ~LfVTGK~------Wp~l~ev~l~ 320 (346)
+|||+..+ ..+|..+++.
T Consensus 434 ~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 434 HLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp EEEECCTTCSSHHHHTCEEEEETT
T ss_pred cEEEecCCCCCcccCceEEEEECC
Confidence 99999743 3366666654
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.75 E-value=1.3e-16 Score=150.79 Aligned_cols=165 Identities=14% Similarity=0.099 Sum_probs=139.1
Q ss_pred CcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC--EEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEE
Q 019103 138 GKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK--TGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLY 213 (346)
Q Consensus 138 gkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~--~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~ 213 (346)
-++++.++.++.+|.+|+..++++||.++-..+ .+.++|++|++++++++.+ .+-|-|++.++++||+++ .++.++
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 358899999999999999999999999997755 8999999999999999986 445678999999999988 599999
Q ss_pred EEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceee
Q 019103 214 QIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLN 293 (346)
Q Consensus 214 vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlN 293 (346)
++|++|++++++++++..|.. |.+++++||+++. ++.|.+|||+|++++++|.+.. .+ .....||
T Consensus 111 v~D~~t~~~~~ti~~~~eG~g------lt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~-~g-------~~~~~lN 175 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEGWG------LTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTA-HG-------EELPELN 175 (262)
T ss_dssp EEETTTCCEEEEEECSSCCCC------EEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEE-TT-------EECCCEE
T ss_pred EEECccCcEEEEEECCCCceE------EecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEecc-CC-------ccccccc
Confidence 999999999999999654433 5566789999985 8999999999999999998832 11 0124688
Q ss_pred EEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 294 GIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 294 GIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.+.|. + +++|+..-.-+.|+.|..
T Consensus 176 ELe~~-~-G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 176 ELEWV-D-GEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp EEEEE-T-TEEEEEETTSSEEEEECT
T ss_pred eeEEE-C-CEEEEEEccCCeEEEEEC
Confidence 99997 3 589999877788988854
No 22
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=1.1e-15 Score=143.09 Aligned_cols=203 Identities=15% Similarity=0.174 Sum_probs=163.4
Q ss_pred eEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCE
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKT 171 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~ 171 (346)
-+++.++++... ..++.+++++. ||++.. .+..|.+||+.+++.+..+..+..+.+..+..+++.||++...++.
T Consensus 64 ~~~~~~~~~~~~--v~~~~~spdg~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 64 NNVIATVPAGSS--PQGVAVSPDGKQVYVTNM--ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp TEEEEEEECSSS--EEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred CeEEEEEECCCC--ccceEECCCCCEEEEEEC--CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 456778877553 47999999884 777765 4569999999999999888877776555555567889999999999
Q ss_pred EEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCE
Q 019103 172 GFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGE 247 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~ 247 (346)
+.++|..+.+.+..++.+ .+.+..+++||++||++. +++.|+++|+++.+.+..+.... .+ +.+.+. +.+
T Consensus 140 v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~----~~~~~~~~g~~ 213 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA--AP----SGIAVNPEGTK 213 (391)
T ss_dssp EEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--EE----EEEEECTTSSE
T ss_pred EEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC--Cc----cceEECCCCCE
Confidence 999999999999999875 457777889999999876 57899999999999888877633 22 234444 347
Q ss_pred EEEEec--CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 248 VWANVW--QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 248 LyaNv~--~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
||+... ..+.|.++|+++++++..+... ..+++++++|+++++|+++...+.++...+
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTNKITARIPVG--------------PDPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTTEEEEEEECC--------------SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EEEEecCcCCCcEEEEECCCCeEEEEEecC--------------CCccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 998876 6889999999999999888551 136889999999999999988888887765
No 23
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=8.7e-16 Score=143.73 Aligned_cols=203 Identities=17% Similarity=0.212 Sum_probs=163.4
Q ss_pred eEEEEEEecCCCCcceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCE
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKT 171 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~ 171 (346)
-+++.++++...+ .++.+++++ .||++.+ .+..|++||+.+++++..+..+..+.+..+..++++||++...++.
T Consensus 22 ~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~--~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~ 97 (391)
T 1l0q_A 22 NKVTATIPVGSNP--MGAVISPDGTKVYVANA--HSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASST 97 (391)
T ss_dssp TEEEEEEECSSSE--EEEEECTTSSEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred CeEEEEeecCCCc--ceEEECCCCCEEEEECC--CCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCE
Confidence 4667778775554 799999998 4778876 4569999999999999999888766555555568899999988999
Q ss_pred EEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCE
Q 019103 172 GFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGE 247 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~ 247 (346)
+.++|.++.+.+..+..+ .+.+..+++||+.||++. +++.|+++|.++.+.+..+..+.. + +.+.+. +.+
T Consensus 98 v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~----~~~~~~~dg~~ 171 (391)
T 1l0q_A 98 LSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS--P----KGIAVTPDGTK 171 (391)
T ss_dssp EEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS--E----EEEEECTTSSE
T ss_pred EEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC--c----ceEEECCCCCE
Confidence 999999999999999875 456677889999998876 588999999999999988877542 2 335554 347
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC--CCCcEEEEEE
Q 019103 248 VWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK--LWPKLYEINL 319 (346)
Q Consensus 248 LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK--~Wp~l~ev~l 319 (346)
||+.....+.|.++|+++++++..+... ..+++++++|+++++|+++. ....++...+
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKVE--------------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECS--------------SEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEecC--------------CCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 9998888899999999999998888541 25689999999999999985 5566666654
No 24
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=3.4e-16 Score=146.86 Aligned_cols=214 Identities=9% Similarity=0.043 Sum_probs=155.7
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc-EEEEecc--------CCCeeEEEEEEe--CCEEE
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-VEAINQM--------EGSYFGEGLTLL--GEKLF 163 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk-v~~~~~l--------~~~~FgeGit~~--g~~LY 163 (346)
++..+....-....|++++++|.||++.. +..+|.+||++... .+..+.- ..-..+.|++++ ++.||
T Consensus 81 ~~~~~~~~~~~~p~gia~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 81 ILQSSGKNLFYLPHGLSIDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp EEEEECTTTCSSEEEEEECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE
T ss_pred EEeccCCCccCCceEEEECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE
Confidence 44444433333457999999999999976 66799999987552 3333321 111235678886 58999
Q ss_pred EEEe-eCCEEEEEECCCCcEEEEEecC------------CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEec
Q 019103 164 QVTW-LQKTGFIYDQNNLNKLEEFTHQ------------MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 164 ~ltw-~~~~v~V~D~~tl~~i~ti~~~------------~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~ 229 (346)
+++. .++.|.+|| .+++.+.++... .|.|..+++|++.||++| +.++|.++|+++++.++++...
T Consensus 159 v~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 159 VSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp EEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred EEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 9995 799999999 677888877421 267777888889999999 6889999999999999888765
Q ss_pred cCCe-eee---eceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEE
Q 019103 230 YKGR-EVR---NLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIF 305 (346)
Q Consensus 230 ~~G~-pv~---~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~Lf 305 (346)
..|. +.. ....+-..+|.+|++....+.|.++|+.+|+++.++.... .....|+|||++|++ .+|
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~----------~~~~~p~~ia~~~dG-~ly 306 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR----------KHFDMPHDIVASEDG-TVY 306 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS----------SCCSSEEEEEECTTS-EEE
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC----------CccCCeeEEEECCCC-CEE
Confidence 4332 221 0011222256666666667799999999999999884210 123478999999998 999
Q ss_pred EecCCCCcEEEEEEeec
Q 019103 306 VTGKLWPKLYEINLREM 322 (346)
Q Consensus 306 VTGK~Wp~l~ev~l~~~ 322 (346)
|++..-.+|+.+++...
T Consensus 307 vad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 307 IGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEESSSCCEEEEEEEEC
T ss_pred EEECCCCEEEEEeCCcc
Confidence 99999999999998753
No 25
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.75 E-value=8.5e-18 Score=174.54 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=166.6
Q ss_pred eeEEEE--EEecCCCCcceeEEE-e-cCC-EEEEEcC---------------CCCCCeEEEEECCCCcEEEEeccCCCee
Q 019103 92 TIQVVN--EFPHDPRAFTQGLLY-A-END-TLFESTG---------------LYGRSSVRRVALETGKVEAINQMEGSYF 151 (346)
Q Consensus 92 t~~Vv~--t~phd~~~FTqGL~~-~-~d~-~LyeStG---------------lyg~s~V~~iDl~Tgkv~~~~~l~~~~F 151 (346)
++++++ ++|....+ .|+.+ + ||+ .+|+++- ....+.|.+||.+|+++..++.++.++-
T Consensus 121 t~~~~~ii~ip~g~~p--hg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd 198 (595)
T 1fwx_A 121 VMKCDAILEIPNAKGI--HGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLD 198 (595)
T ss_dssp TTEEEEEEECSSCCSE--EEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCC
T ss_pred CceEeeEEeCCCCCCC--cceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCcc
Confidence 556566 67776666 79998 4 666 6888841 1234699999999999999999988876
Q ss_pred EEEEEEeCCEEEEEEeeC-------------------------------------CEEEEEECCC--CcE-EEEEecC-C
Q 019103 152 GEGLTLLGEKLFQVTWLQ-------------------------------------KTGFIYDQNN--LNK-LEEFTHQ-M 190 (346)
Q Consensus 152 geGit~~g~~LY~ltw~~-------------------------------------~~v~V~D~~t--l~~-i~ti~~~-~ 190 (346)
+..++.+|+.+|+++..+ +.|.|+|.++ .++ +++|+++ .
T Consensus 199 ~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~ 278 (595)
T 1fwx_A 199 NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANN 278 (595)
T ss_dssp CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESS
T ss_pred ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCC
Confidence 666666899999998665 3499999999 667 8899986 7
Q ss_pred CceeEEeeCCCEEEEEC-CCCeEEEEeCCCCc------------EEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCC
Q 019103 191 KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLK------------VIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTD 256 (346)
Q Consensus 191 peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~k------------vi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn 256 (346)
|+|..++|||+++|++| ++++|++||.++++ +++++++|. .|.+ +.|. +|++|++++.++
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~--gP~h----~aF~~dG~aY~t~~lds 352 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL--GPLH----TAFDGRGNAYTSLFLDS 352 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS--CEEE----EEECTTSEEEEEETTTT
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC--Ccce----EEECCCCeEEEEEecCC
Confidence 99999999999999999 69999999999874 788888876 4766 6676 579999999999
Q ss_pred eEEEEeCCC----------CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC-CcE
Q 019103 257 CIARISHED----------GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW-PKL 314 (346)
Q Consensus 257 ~I~vID~~T----------G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W-p~l 314 (346)
.|+++|.++ .+|+.++++. ..+.. .....|++.+|||+.||+++|.. +++
T Consensus 353 qV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh-------~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 353 QVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGH-------LKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEE-------EEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred cEEEEEhhHhhhhhcccccceeEEEeecc-ccccc-------ceeccceEeCCCCCEEEEcCCCCcccc
Confidence 999999998 7899999882 22110 22346788899999999999998 444
No 26
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.74 E-value=1.5e-16 Score=163.84 Aligned_cols=192 Identities=13% Similarity=0.029 Sum_probs=153.9
Q ss_pred EEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECC--CCcEEEEEec
Q 019103 111 LYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQN--NLNKLEEFTH 188 (346)
Q Consensus 111 ~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~--tl~~i~ti~~ 188 (346)
..++++.+|++.. ++++|.+||++|++++.+++.+..+.+..++.+++++|+++ .++.+.+||+. +++++++++.
T Consensus 162 ~~d~~~~~~V~~~--~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 162 DWDLENLFSVTLR--DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp CCCGGGEEEEEET--TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSCCEEEEEEC
T ss_pred ccCCCceEEEEeC--CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCCcEeEEEec
Confidence 3556668999987 77899999999999999999988776655556789999987 47899999996 9999999998
Q ss_pred C-CCceeEEe----eCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEecc---CC---eeeeeceeeEee--CCEEEEEecC
Q 019103 189 Q-MKDGWGLA----TDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY---KG---REVRNLNELEFI--KGEVWANVWQ 254 (346)
Q Consensus 189 ~-~peGwGLt----~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~---~G---~pv~~lNELE~~--~G~LyaNv~~ 254 (346)
+ .|.+.+++ |||++||++| .+++|.+||++|++++++|.++. ++ .|-..+..+-.. +.+.++|+..
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 6 57888999 6999999998 58999999999999999999853 11 111112222222 3578899999
Q ss_pred CCeEEEEeCCCCeEE--EEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 255 TDCIARISHEDGVVL--GWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 255 sn~I~vID~~TG~Vv--~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
++.|.+||..+.+.+ ..|.. +..|.+++|+|++++|||++...++|..|++
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i~~--------------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~ 371 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEISA--------------ERFLHDGGLDGSHRYFITAANARNKLVVIDT 371 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEEEC--------------CSSEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred CCeEEEEecCCCccceeeeeec--------------cccccCceECCCCCEEEEEeCCCCeEEEEEC
Confidence 999999999987533 33322 2368899999999999999999999998875
No 27
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=1e-16 Score=162.91 Aligned_cols=192 Identities=12% Similarity=0.024 Sum_probs=156.5
Q ss_pred EEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEEC--CCCcEEEEEec
Q 019103 111 LYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQ--NNLNKLEEFTH 188 (346)
Q Consensus 111 ~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~--~tl~~i~ti~~ 188 (346)
.+++++++|+++. +++.|.+||.++++++..++.+..+++..+++++++||+++.. +.|.+||. ++++.+++++.
T Consensus 144 ~~~p~~~~~vs~~--~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLR--DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCCGGGEEEEEEG--GGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEEC
T ss_pred ccCCCCEEEEEEc--CCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEec
Confidence 4788899999977 6779999999999999999987777666666688999999976 99999999 89999999998
Q ss_pred C-CCceeEEee----CCCEEEEEC-CCCeEEEEeCCCCcEEEEEEecc---CCe---eeeeceeeEee--CCEEEEEecC
Q 019103 189 Q-MKDGWGLAT----DGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY---KGR---EVRNLNELEFI--KGEVWANVWQ 254 (346)
Q Consensus 189 ~-~peGwGLt~----Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~---~G~---pv~~lNELE~~--~G~LyaNv~~ 254 (346)
+ .|.+..+++ ||++||+++ .+++|.++|.+|+++++++.+.. ++. +-..+..+.+. ++++|+++..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 6 467888999 999999998 58999999999999999998842 110 11122233333 5689999999
Q ss_pred CCeEEEEeCCCCeEEE--EEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 255 TDCIARISHEDGVVLG--WVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 255 sn~I~vID~~TG~Vv~--~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
++.|.+||..+++.+. ++.. +..|.+++|+|++++||+++...++|..+.+
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~--------------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~ 353 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGA--------------APFLHDGGWDSSHRYFMTAANNSNKVAVIDS 353 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEEC--------------CSSCCCEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred CCeEEEEEecCCCcceeEEecc--------------CcCccCceECCCCCEEEEEecCCCeEEEEEC
Confidence 9999999999987554 4432 2357889999999999999988888887765
No 28
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.73 E-value=3.3e-16 Score=141.92 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=152.3
Q ss_pred eeEEEEEEecCCCC-cceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCC------CeeEEEEEEeCCEEE
Q 019103 92 TIQVVNEFPHDPRA-FTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEG------SYFGEGLTLLGEKLF 163 (346)
Q Consensus 92 t~~Vv~t~phd~~~-FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~------~~FgeGit~~g~~LY 163 (346)
+-+++.+++++... ...++.+++|| .+|+++. +...|.+||+.+++++..+.++. .+.+..++.++++||
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 97 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEE
Confidence 35678888876521 13699999998 6888876 55799999999999998888754 555555555678999
Q ss_pred EEE--------e---eCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC
Q 019103 164 QVT--------W---LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK 231 (346)
Q Consensus 164 ~lt--------w---~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~ 231 (346)
++. | .++.+.++|.++++.+..++.+ .+.+..+++||++||++ ++.|+++|+++++++..+..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~ 175 (337)
T 1pby_B 98 IYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW 175 (337)
T ss_dssp EEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT
T ss_pred EEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc
Confidence 985 2 3699999999999999999875 56888899999999999 47899999999999988887652
Q ss_pred CeeeeeceeeEeeCCEEEEEecCCC-----------------------eEEEEeCCCCeEEEEEECCchhhhhhhccCCC
Q 019103 232 GREVRNLNELEFIKGEVWANVWQTD-----------------------CIARISHEDGVVLGWVLLPNLRERLVAAGYNG 288 (346)
Q Consensus 232 G~pv~~lNELE~~~G~LyaNv~~sn-----------------------~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~ 288 (346)
..++. +...+.++|+.....+ .|.++|++++++. .+.+.. .
T Consensus 176 ~~~~~----~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~-----------~ 239 (337)
T 1pby_B 176 EAETY----AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRI-----------M 239 (337)
T ss_dssp TTTTB----CCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEE-----------C
T ss_pred CCCce----eCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCC-----------C
Confidence 22321 2222233444332222 5899999999987 665411 1
Q ss_pred CceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 289 IDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 289 ~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
...+++++++|+++++|++ -+.|+.+.+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~---~~~v~~~d~ 267 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA---YNVLESFDL 267 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE---ESEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe---CCeEEEEEC
Confidence 2367899999999999998 367776654
No 29
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=3.1e-16 Score=143.53 Aligned_cols=205 Identities=11% Similarity=0.071 Sum_probs=151.3
Q ss_pred eEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcE-EEEeccCCCeeE-EEEEEeCCEEEEEEeeC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKV-EAINQMEGSYFG-EGLTLLGEKLFQVTWLQ 169 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv-~~~~~l~~~~Fg-eGit~~g~~LY~ltw~~ 169 (346)
-+++.+++....+ . ++++++||+ ||+++. +...|.+||++++++ ...+..+..+.. ..++.+++.||+..+.+
T Consensus 30 ~~~~~~~~~~~~~-~-~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 105 (331)
T 3u4y_A 30 LEILNQITLGYDF-V-DTAITSDCSNVVVTSD--FCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLN 105 (331)
T ss_dssp CCEEEEEECCCCE-E-EEEECSSSCEEEEEES--TTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSS
T ss_pred cceeeeEEccCCc-c-eEEEcCCCCEEEEEeC--CCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCC
Confidence 3456666654333 2 999999985 888876 567999999999998 777766665544 55666788999555554
Q ss_pred C--EEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCe-EEEEeCCCCc-EEEE--EEeccCCeeeeeceee
Q 019103 170 K--TGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSM-LYQIDPQTLK-VIRK--DIVRYKGREVRNLNEL 241 (346)
Q Consensus 170 ~--~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~-l~vIDp~T~k-vi~~--I~V~~~G~pv~~lNEL 241 (346)
+ .+.++|.++.+.+.+++.+ .+.+..++|||++||+++ +++. |.++|..... +... ..+.....| ..+
T Consensus 106 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~----~~~ 181 (331)
T 3u4y_A 106 HPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRP----FNI 181 (331)
T ss_dssp SSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSE----EEE
T ss_pred CcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCc----cce
Confidence 5 9999999999999999875 567888999999999987 4567 8877755422 2111 111111123 335
Q ss_pred Eee-CC-EEEEEecCCCeEEEEeCCCCeE---EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 242 EFI-KG-EVWANVWQTDCIARISHEDGVV---LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 242 E~~-~G-~LyaNv~~sn~I~vID~~TG~V---v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
.+. +| ++|+..+..+.|.++|++++++ +..++.. ..+.+++++|+++.+|+++..-+.|+.
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--------------~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--------------NLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--------------SCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--------------CCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 554 45 6999999999999999999998 7777541 246899999999999999987777777
Q ss_pred EEE
Q 019103 317 INL 319 (346)
Q Consensus 317 v~l 319 (346)
+.+
T Consensus 248 ~d~ 250 (331)
T 3u4y_A 248 FNQ 250 (331)
T ss_dssp EET
T ss_pred EEC
Confidence 665
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.72 E-value=9.7e-16 Score=143.36 Aligned_cols=164 Identities=17% Similarity=0.124 Sum_probs=138.8
Q ss_pred cEEEEeccCCCeeEEEEEEeCCEEEEEEee--CCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEE
Q 019103 139 KVEAINQMEGSYFGEGLTLLGEKLFQVTWL--QKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQ 214 (346)
Q Consensus 139 kv~~~~~l~~~~FgeGit~~g~~LY~ltw~--~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~v 214 (346)
+++++++.++..|-+|+..++++||.++-. +..+.++|++|++++++++.+ .+-|-|++.++++||+.+ .++.+++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 688999999999999999999999999877 469999999999999999986 567788999999999988 5999999
Q ss_pred EeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeE
Q 019103 215 IDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNG 294 (346)
Q Consensus 215 IDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNG 294 (346)
+|++|++++++++.+..|- . |...+++||+++. ++.|.+|||+|.+++++|.+.. .+. ....+|.
T Consensus 90 ~D~~tl~~~~ti~~~~~Gw--g----lt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~-~g~-------~~~~lNe 154 (243)
T 3mbr_X 90 YDLATLTPRARFRYPGEGW--A----LTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTA-GGR-------PLDNLNE 154 (243)
T ss_dssp EETTTTEEEEEEECSSCCC--E----EEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEE-TTE-------ECCCEEE
T ss_pred EECCcCcEEEEEeCCCCce--E----EeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEcc-CCc-------cccccee
Confidence 9999999999999975443 3 5566789999995 9999999999999999998832 211 1236799
Q ss_pred EEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 295 IAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 295 IA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+.+. ++++|+..-.-+.|..|..
T Consensus 155 Le~~--~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 155 LEWV--NGELLANVWLTSRIARIDP 177 (243)
T ss_dssp EEEE--TTEEEEEETTTTEEEEECT
T ss_pred eEEe--CCEEEEEECCCCeEEEEEC
Confidence 9987 5579999766788888754
No 31
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.72 E-value=2.7e-15 Score=136.87 Aligned_cols=202 Identities=13% Similarity=0.111 Sum_probs=146.6
Q ss_pred eEEEEEEecCC--CCcceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-------eeEEEEEEeCCEE
Q 019103 93 IQVVNEFPHDP--RAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGS-------YFGEGLTLLGEKL 162 (346)
Q Consensus 93 ~~Vv~t~phd~--~~FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-------~FgeGit~~g~~L 162 (346)
-+++++++... .+ .++.+++|| .+|+++. +...|.+||+++++++..+.++.. +.+..++.+|+.|
T Consensus 31 ~~~~~~~~~~~~~~~--~~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 106 (349)
T 1jmx_B 31 DTVYKSCVMPDKFGP--GTAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEV 106 (349)
T ss_dssp TEEEEEEECSSCCSS--CEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEE
T ss_pred CcEEEEEecCCCCCC--ceeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEE
Confidence 46677787654 44 699999998 5888876 567999999999999988887542 3344455577899
Q ss_pred EEEEee-----------CCEEEEEECCCCc---EEEEEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEE
Q 019103 163 FQVTWL-----------QKTGFIYDQNNLN---KLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDI 227 (346)
Q Consensus 163 Y~ltw~-----------~~~v~V~D~~tl~---~i~ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~ 227 (346)
|++... .+.++++|.++++ .+..++.+ ...+..+++||+ +|++++ .|+++|+++++++.++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 107 YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred EEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccc
Confidence 999855 7899999999844 44455543 346667899999 999753 49999999999998887
Q ss_pred eccCCeeee-------------------ec--------------------------------------------eeeE--
Q 019103 228 VRYKGREVR-------------------NL--------------------------------------------NELE-- 242 (346)
Q Consensus 228 V~~~G~pv~-------------------~l--------------------------------------------NELE-- 242 (346)
.+..+.+.. .+ ..+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 263 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 263 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec
Confidence 754221100 00 0011
Q ss_pred e-eCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 243 F-IKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 243 ~-~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
. .+.++|+. .+.|.++|+++++++..++.. ..+.+++++|++++||+++.. +.|+.+++
T Consensus 264 p~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~-~~v~v~d~ 323 (349)
T 1jmx_B 264 PKDPNQIYGV---LNRLAKYDLKQRKLIKAANLD--------------HTYYCVAFDKKGDKLYLGGTF-NDLAVFNP 323 (349)
T ss_dssp SSCTTEEEEE---ESEEEEEETTTTEEEEEEECS--------------SCCCEEEECSSSSCEEEESBS-SEEEEEET
T ss_pred CCCCCEEEEE---cCeEEEEECccCeEEEEEcCC--------------CCccceEECCCCCEEEEecCC-CeEEEEec
Confidence 1 23378877 789999999999999998651 135789999999999997654 77776665
No 32
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.72 E-value=1.5e-15 Score=139.00 Aligned_cols=211 Identities=11% Similarity=0.085 Sum_probs=152.3
Q ss_pred EEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCE-EE
Q 019103 96 VNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKT-GF 173 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~-v~ 173 (346)
+.++++...+. .++.+++||+ ||.+.+..+...|.+||+++++++..++.+..+.+..++++|+.||+++..++. +.
T Consensus 76 ~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 76 VVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVR 154 (331)
T ss_dssp EEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEE
T ss_pred EEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEE
Confidence 45555555553 3499999985 773333111229999999999999998888777555555567789999998888 99
Q ss_pred EEECCCCcEE-----EEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcE---EEEEEeccCCeeeeeceeeEe
Q 019103 174 IYDQNNLNKL-----EEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV---IRKDIVRYKGREVRNLNELEF 243 (346)
Q Consensus 174 V~D~~tl~~i-----~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kv---i~~I~V~~~G~pv~~lNELE~ 243 (346)
+||.+....+ ..++.+ .+.+..+++||++||+++ ++++|+++|++++++ +.++..+. .| ..+.+
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~--~~----~~~~~ 228 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN--LP----GTIVV 228 (331)
T ss_dssp EEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS--CC----CCEEE
T ss_pred EEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC--CC----ceEEE
Confidence 8887643222 223333 467888999999999987 588999999999998 77777643 22 23555
Q ss_pred e-CC-EEEEEecCCCeEEEEeCCCCeE--EEEEECCc-hhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 244 I-KG-EVWANVWQTDCIARISHEDGVV--LGWVLLPN-LRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 244 ~-~G-~LyaNv~~sn~I~vID~~TG~V--v~~I~l~~-l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
. || +||+.....+.|.++|+++|++ +..+...- +.+. .....++++|+|++++||+++..-+.+..++
T Consensus 229 spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 229 SRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPR-------PLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp CTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCG-------GGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCC-------CcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 4 44 6999988888999999999999 66654310 1110 0112378999999999999999888888777
Q ss_pred Ee
Q 019103 319 LR 320 (346)
Q Consensus 319 l~ 320 (346)
+.
T Consensus 302 ~~ 303 (331)
T 3u4y_A 302 IS 303 (331)
T ss_dssp TT
T ss_pred ec
Confidence 64
No 33
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=1.4e-15 Score=147.92 Aligned_cols=188 Identities=9% Similarity=-0.053 Sum_probs=143.0
Q ss_pred cCC-EEEEEcC-CCCCC-eEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe---------eCCEEEEEECCCCc
Q 019103 114 END-TLFESTG-LYGRS-SVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW---------LQKTGFIYDQNNLN 181 (346)
Q Consensus 114 ~d~-~LyeStG-lyg~s-~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw---------~~~~v~V~D~~tl~ 181 (346)
+++ .+|++++ ..+.- .|.+||+++++++.+++.+..+ +..+++++++||+++. .++.+.+||+++++
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 444 6898876 32222 8999999999999999988877 7777888999999984 46889999999999
Q ss_pred EEEEEecC---------CCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEE-EEeccCCeeeeeceeeEeeCCEEE
Q 019103 182 KLEEFTHQ---------MKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRK-DIVRYKGREVRNLNELEFIKGEVW 249 (346)
Q Consensus 182 ~i~ti~~~---------~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~-I~V~~~G~pv~~lNELE~~~G~Ly 249 (346)
++++++.+ .|++..++|||++||++| + +++|++|| +|++++++ +.++. . +. +...+++.|
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~--~-~~----~~~~~~~~~ 180 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT--C-YH----IHPGAPSTF 180 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc--e-EE----EEeCCCceE
Confidence 99999874 367889999999999988 4 68999999 99999999 88853 2 11 334455789
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+.++.++.+++||. +|+++..+...... .. ...+....+|+++++++|+.. .-+.++.|.+
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~~~~~~~~~~---~~----~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~ 241 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAAGAGLVGAML---TA----AQNLLTQPAQANKSGRIVWPV-YSGKILQADI 241 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEEEEEeccccc---cC----CcceeecceeEecCCEEEEEc-CCceEEEEec
Confidence 88999999999999 99999776532111 00 011334467777777655544 4567887776
No 34
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.70 E-value=2e-16 Score=156.72 Aligned_cols=147 Identities=9% Similarity=-0.037 Sum_probs=117.9
Q ss_pred EeCCEEEEEEee----CCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC----------CCCeEEEEeCCCCc
Q 019103 157 LLGEKLFQVTWL----QKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD----------GSSMLYQIDPQTLK 221 (346)
Q Consensus 157 ~~g~~LY~ltw~----~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd----------Gs~~l~vIDp~T~k 221 (346)
++++++|+++|. .+.++|||++|++++++|+++ .| +..++|||++||++| .++.|++||++|++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 467999999998 889999999999999999997 56 599999999999987 26889999999999
Q ss_pred EEEEEEeccCCe--eeeeceeeEee--CCEEEEEecC-CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeE--
Q 019103 222 VIRKDIVRYKGR--EVRNLNELEFI--KGEVWANVWQ-TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNG-- 294 (346)
Q Consensus 222 vi~~I~V~~~G~--pv~~lNELE~~--~G~LyaNv~~-sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNG-- 294 (346)
++++|.++..++ .-..+..+.+. +.+|||.+.. ++.|++||++|++|+++|+++++.. ..|.|
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~----------~~P~g~~ 190 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH----------IFPTAPD 190 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE----------EEEEETT
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcce----------eecCCCc
Confidence 999999964211 00122335554 4589998864 8999999999999999999876532 13455
Q ss_pred --EEEeCCCCEEEEecCCCCcE
Q 019103 295 --IAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 295 --IA~d~~~~~LfVTGK~Wp~l 314 (346)
++..+||+.+||+-+.-+++
T Consensus 191 ~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEEEETTSCEEEEECCSSSCC
T ss_pred eeEEECCCCCEEEEECCCCCeE
Confidence 48889999999987766666
No 35
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.70 E-value=4.1e-15 Score=134.96 Aligned_cols=175 Identities=9% Similarity=0.060 Sum_probs=128.6
Q ss_pred cceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEee--CCEEEEEECCCC
Q 019103 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWL--QKTGFIYDQNNL 180 (346)
Q Consensus 106 FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~--~~~v~V~D~~tl 180 (346)
...||+++++ +.||++.. +.++|.++|++..........+ ...+.|++++ +++||++++. .+.+++++.+.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg- 155 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQRRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG- 155 (267)
T ss_dssp CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-
T ss_pred CccEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCEEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-
Confidence 3479999975 68999987 6679999999854322222222 1234667776 6899999998 68999998753
Q ss_pred cEEEEEe---cCCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCC
Q 019103 181 NKLEEFT---HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTD 256 (346)
Q Consensus 181 ~~i~ti~---~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn 256 (346)
+....+. ...|.|.++++|+++||++| ++++|+++|+.+.+....+. ..+.|. .+...+++||++.|..+
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~----gi~~d~~~lyva~~~~~ 229 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE--GLQYPF----AVTSYGKNLYYTDWKTN 229 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE--CCCSEE----EEEEETTEEEEEETTTT
T ss_pred CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec--CCCCce----EEEEeCCEEEEEECCCC
Confidence 2223332 23578888999999999999 68899999998755443333 223454 36677899999999999
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN 302 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 302 (346)
.|.+||+++|+++.+|.+... .-|.|||+.|++-
T Consensus 230 ~v~~~d~~~g~~~~~i~~g~~------------~~p~gi~~~~~~~ 263 (267)
T 1npe_A 230 SVIAMDLAISKEMDTFHPHKQ------------TRLYGITIALSQC 263 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSC------------CCCCCEEEECSCC
T ss_pred eEEEEeCCCCCceEEEccccc------------cccceeeecCccC
Confidence 999999999999999965221 1479999999864
No 36
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.70 E-value=6e-16 Score=160.69 Aligned_cols=185 Identities=14% Similarity=0.017 Sum_probs=149.2
Q ss_pred CC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEE----EeCCEEEEEE-----------------eeCCEE
Q 019103 115 ND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLT----LLGEKLFQVT-----------------WLQKTG 172 (346)
Q Consensus 115 d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit----~~g~~LY~lt-----------------w~~~~v 172 (346)
|| .||++.. +.++|.+||+++.|+.+.+.++...-.+|++ ++++++|+.+ |..+.+
T Consensus 100 DG~~lfVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DGRFLFMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEET--TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CCCEEEEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 55 5999876 6789999999999999966665433356777 4678999995 888899
Q ss_pred EEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECC-C-------------------------------------CeEE
Q 019103 173 FIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDG-S-------------------------------------SMLY 213 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdG-s-------------------------------------~~l~ 213 (346)
.++|++|++++.+++++ .|+|..+++||+++|+++. + +.|.
T Consensus 178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999999999999994 7999999999999999873 4 2499
Q ss_pred EEeCCC--CcE-EEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCe------------EEEEEECCchh
Q 019103 214 QIDPQT--LKV-IRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGV------------VLGWVLLPNLR 278 (346)
Q Consensus 214 vIDp~T--~kv-i~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~------------Vv~~I~l~~l~ 278 (346)
|||+++ .++ +++|+|+.. |..- .+..++.++||++..+|+|++||.++.+ +++.+.+
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~--PhGv--~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v---- 329 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANN--PHGC--NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL---- 329 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESS--CCCE--EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC----
T ss_pred EEeCcccCCceeEEEEecCCC--ceEE--EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC----
Confidence 999998 667 899999863 3320 1223355899999999999999999874 4555533
Q ss_pred hhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 279 ERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 279 ~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+.-|-++||+|+| ++|+|.-....+..+.+.
T Consensus 330 ----------G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 330 ----------GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp ----------CSCEEEEEECTTS-EEEEEETTTTEEEEEEHH
T ss_pred ----------CCCcceEEECCCC-eEEEEEecCCcEEEEEhh
Confidence 3468999999999 999999999998887764
No 37
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.68 E-value=7.3e-16 Score=155.82 Aligned_cols=226 Identities=12% Similarity=0.101 Sum_probs=153.7
Q ss_pred eeEEEEEE-------ecCCCCcceeEEEecCCEEEEEcCC----CCCCeEEEEECCCCcEEEEeccCCC--eeEEEE--E
Q 019103 92 TIQVVNEF-------PHDPRAFTQGLLYAENDTLFESTGL----YGRSSVRRVALETGKVEAINQMEGS--YFGEGL--T 156 (346)
Q Consensus 92 t~~Vv~t~-------phd~~~FTqGL~~~~d~~LyeStGl----yg~s~V~~iDl~Tgkv~~~~~l~~~--~FgeGi--t 156 (346)
..++++++ +++ .++..++...||| +|+|+-. .+...|.++|.+|++++.+++.+.. .|+-.+ .
T Consensus 119 ~p~~~k~ie~~~~~~~~g-~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 119 EPKIIKVIEPEEVKKVSG-YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWN 196 (462)
T ss_dssp SCEEEEEECHHHHHHHHC-EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEE
T ss_pred CceeeeeechhhcccccC-CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEEC
Confidence 35777777 232 2244788999999 9987641 1347999999999999999987633 455333 5
Q ss_pred EeCCEEEEEEee------------------CCEEEEEECCCCcEEEEEecC----CCceeEE--eeCCCEEEEEC-----
Q 019103 157 LLGEKLFQVTWL------------------QKTGFIYDQNNLNKLEEFTHQ----MKDGWGL--ATDGKVLFGSD----- 207 (346)
Q Consensus 157 ~~g~~LY~ltw~------------------~~~v~V~D~~tl~~i~ti~~~----~peGwGL--t~Dg~~LyvSd----- 207 (346)
++++.+|.++|- .++|.+||.++++++++++++ +|-+..+ ++||+++|+++
T Consensus 197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~ 276 (462)
T 2ece_A 197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK 276 (462)
T ss_dssp TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT
T ss_pred CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc
Confidence 578889999974 899999999999999999986 2233334 88999999965
Q ss_pred -CCCeEEEEeCCC--CcEEEEEEeccCCeee---------------eeceeeEee--CCEEEEEecCCCeEEEEeCC---
Q 019103 208 -GSSMLYQIDPQT--LKVIRKDIVRYKGREV---------------RNLNELEFI--KGEVWANVWQTDCIARISHE--- 264 (346)
Q Consensus 208 -Gs~~l~vIDp~T--~kvi~~I~V~~~G~pv---------------~~lNELE~~--~G~LyaNv~~sn~I~vID~~--- 264 (346)
-+++|.++..+. ++.+..|.+.. .++ ....++... +.+|||++|..|.|+++|..
T Consensus 277 ~Lss~V~v~~~d~g~~~~~~vIdi~~--~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~ 354 (462)
T 2ece_A 277 DLSSSIWLWFYEDGKWNAEKVIEIPA--EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF 354 (462)
T ss_dssp TCCEEEEEEEEETTEEEEEEEEEECC--EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT
T ss_pred CCCceEEEEEecCCceeEEEEEeCCC--ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 577887655433 33333443322 110 112233332 45899999999999998854
Q ss_pred CCeEEEEEECCchhhhhhh-ccCCCCceeeEEEEeCCCCEEEEec--------C-----CCCcEEEEEEee
Q 019103 265 DGVVLGWVLLPNLRERLVA-AGYNGIDVLNGIAWDSNRNRIFVTG--------K-----LWPKLYEINLRE 321 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~-~~~~~~~vlNGIA~d~~~~~LfVTG--------K-----~Wp~l~ev~l~~ 321 (346)
+.+++++|.+.+....... .+.+...-|.+++++|+|++||||+ | +-..|++++..+
T Consensus 355 ~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~ 425 (462)
T 2ece_A 355 KPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANP 425 (462)
T ss_dssp SCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECT
T ss_pred CcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecC
Confidence 6799999988532100000 0011112589999999999999999 6 556788776553
No 38
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.68 E-value=4.9e-15 Score=138.04 Aligned_cols=187 Identities=17% Similarity=0.199 Sum_probs=131.4
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCc--EE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN--KL 183 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~--~i 183 (346)
..||+++++|+||++....+...|.++|..+|++.....++...|..|++.. ++.+|++++.++.++++|+.+.+ +.
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEE
Confidence 3799999999999997522223699999999998766666666778888764 57899999989999999988652 22
Q ss_pred EE-------Eec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCC-CcEEE-EEEeccCCeeeeeceeeEee-CCEEEEE
Q 019103 184 EE-------FTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVIR-KDIVRYKGREVRNLNELEFI-KGEVWAN 251 (346)
Q Consensus 184 ~t-------i~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T-~kvi~-~I~V~~~G~pv~~lNELE~~-~G~LyaN 251 (346)
.. ... +...+-|+++|+++||++| +.++|+++|.+. .++.. ++.. ..+.| ..|.+. +|.||++
T Consensus 154 ~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P----~gi~vd~dG~l~va 228 (306)
T 2p4o_A 154 LEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNI----DDFAFDVEGNLYGA 228 (306)
T ss_dssp EECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCC----SSEEEBTTCCEEEE
T ss_pred EECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCC----CCeEECCCCCEEEE
Confidence 10 011 1234556799999999999 588999999864 33211 1111 11123 336555 6899999
Q ss_pred ecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEe---CCCCEEEEecCC
Q 019103 252 VWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWD---SNRNRIFVTGKL 310 (346)
Q Consensus 252 v~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d---~~~~~LfVTGK~ 310 (346)
+|..+.|.+||++ |++.....+ .. ....|.++|+. |++++||||...
T Consensus 229 ~~~~~~V~~~~~~-G~~~~~~~~-~~----------~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 229 THIYNSVVRIAPD-RSTTIIAQA-EQ----------GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CBTTCCEEEECTT-CCEEEEECG-GG----------TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred eCCCCeEEEECCC-CCEEEEeec-cc----------ccCCceEEEEecccCCCCEEEEECCC
Confidence 9999999999996 876432211 11 12358999999 899999999643
No 39
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=1.6e-15 Score=138.37 Aligned_cols=159 Identities=9% Similarity=-0.000 Sum_probs=124.4
Q ss_pred eEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC--CeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG--SYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 109 GL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~--~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
|+++.+++.+|++++ +++.|.+||+++++++..+.++. .+.+..++.+++.+|++...++.+.++|.++++.+.++
T Consensus 4 g~~~~~~~~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN--YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEE--TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeC--CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 677888889999987 56799999999999999998876 55554455567889999999999999999999999998
Q ss_pred ecCC--------CceeEEeeCCCEEEEECC------------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C
Q 019103 187 THQM--------KDGWGLATDGKVLFGSDG------------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (346)
Q Consensus 187 ~~~~--------peGwGLt~Dg~~LyvSdG------------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~ 245 (346)
+.+. +.+..+++||++||+++. .+.|+++|++++++.+.+....... .+..+.+. |
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~d 158 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR---QVYLMRAADD 158 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS---SCCCEEECTT
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC---cccceeECCC
Confidence 8642 578889999999999773 4899999999966554444432211 22334454 6
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
|++|+. ++.|.++|+++|+++..+...
T Consensus 159 g~l~~~---~~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 159 GSLYVA---GPDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp SCEEEE---SSSEEEECTTTCCEEEEECST
T ss_pred CcEEEc---cCcEEEEeCCCCceecccccc
Confidence 678885 445999999999999988663
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=5.1e-14 Score=130.12 Aligned_cols=199 Identities=13% Similarity=0.160 Sum_probs=141.9
Q ss_pred EEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC---CCeeEEEEEEe-CCEEEEEEeeC----
Q 019103 98 EFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME---GSYFGEGLTLL-GEKLFQVTWLQ---- 169 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~---~~~FgeGit~~-g~~LY~ltw~~---- 169 (346)
.+.++..+ .+++++++|+||+++. +.|.++|++++++....... +.....+++.+ .+++|+.++..
T Consensus 49 ~~~~~~~~--~~i~~~~dG~l~v~~~----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~ 122 (297)
T 3g4e_A 49 RVTMDAPV--SSVALRQSGGYVATIG----TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAP 122 (297)
T ss_dssp EEECSSCE--EEEEEBTTSSEEEEET----TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBT
T ss_pred EEeCCCce--EEEEECCCCCEEEEEC----CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccc
Confidence 34444333 7999999999999874 58999999999875544432 22334556665 36799998653
Q ss_pred -------CEEEEEECCCCcEEEEEec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeC--CCCcEEEE-EEe--cc-CCee
Q 019103 170 -------KTGFIYDQNNLNKLEEFTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDP--QTLKVIRK-DIV--RY-KGRE 234 (346)
Q Consensus 170 -------~~v~V~D~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp--~T~kvi~~-I~V--~~-~G~p 234 (346)
+.++.+|++ .+....... ..|.|..+++||++||++| .++.|+++|. +++++... +-. .. .+.|
T Consensus 123 ~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p 201 (297)
T 3g4e_A 123 AVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP 201 (297)
T ss_dssp TBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEE
T ss_pred ccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCC
Confidence 478999975 333332222 2478899999999999998 4789999974 67775432 221 11 2344
Q ss_pred eeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEe-CCCCEEEEecCC--
Q 019103 235 VRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWD-SNRNRIFVTGKL-- 310 (346)
Q Consensus 235 v~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d-~~~~~LfVTGK~-- 310 (346)
- .+.++ +|.||++.|..+.|.++|++||+++.+|.++. ..+.++||. |++++||||...
T Consensus 202 ~----g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~-------------~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 202 D----GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV-------------DKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp E----EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS-------------SBEEEEEEESGGGCEEEEEEBCTT
T ss_pred C----eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC-------------CCceEEEEeCCCCCEEEEEcCCcC
Confidence 3 36555 68999999999999999999999999997731 146889998 899999999753
Q ss_pred -----------CCcEEEEEEe
Q 019103 311 -----------WPKLYEINLR 320 (346)
Q Consensus 311 -----------Wp~l~ev~l~ 320 (346)
-+.||.|+..
T Consensus 265 ~~~~~~~~~p~~G~~f~~~~~ 285 (297)
T 3g4e_A 265 MDPEGLLRQPEAGGIFKITGL 285 (297)
T ss_dssp CCHHHHHHCTTTTCEEEEECC
T ss_pred CChhHccCCCCCceEEEecCC
Confidence 3568888743
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.67 E-value=8.1e-14 Score=132.11 Aligned_cols=203 Identities=13% Similarity=0.054 Sum_probs=156.3
Q ss_pred EEEEEEecCCCCcceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe-----
Q 019103 94 QVVNEFPHDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW----- 167 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw----- 167 (346)
+.+.+++. ......++.+++++ .+|++.. .+..|.+||+++++.+..+.....+.+..+..+++.||++.+
T Consensus 202 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 202 AYKATVDL-TGKWSKILLYDPIRDLVYCSNW--ISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ 278 (433)
T ss_dssp CEEEEEEC-SSSSEEEEEEETTTTEEEEEET--TTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT
T ss_pred eEEEEEcC-CCCCeeEEEEcCCCCEEEEEec--CCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc
Confidence 45566652 23445799999988 5777765 456999999999999888877666544444446778999987
Q ss_pred --eCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEe
Q 019103 168 --LQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (346)
Q Consensus 168 --~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~ 243 (346)
.++.+.++|..+.+.+..+..+ .+.+..+++|++.+|++. .+++|.++|+++.+++..+..+. .+ +.+.+
T Consensus 279 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--~~----~~~~~ 352 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD--KP----NTIAL 352 (433)
T ss_dssp CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS--SE----EEEEE
T ss_pred ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC--CC----CeEEE
Confidence 4568999999999999988653 456777889999999985 68899999999999998887543 22 34555
Q ss_pred e-CC-EEEEEecCCC--------------eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 244 I-KG-EVWANVWQTD--------------CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 244 ~-~G-~LyaNv~~sn--------------~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
. +| .||+.....+ .|.++|+++++++..+.. ...+.+++|+|+++.|+++
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--------------~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--------------GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--------------SSSEEEEEECTTSCEEEEE
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC--------------CCCCceEEEcCCCCEEEEE
Confidence 5 34 7998876543 899999999999998854 1246899999999999999
Q ss_pred cCCCCcEEEEEE
Q 019103 308 GKLWPKLYEINL 319 (346)
Q Consensus 308 GK~Wp~l~ev~l 319 (346)
+.....++-.++
T Consensus 419 ~~~d~~i~v~~~ 430 (433)
T 3bws_A 419 DFLDHQIRVYRR 430 (433)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCeEEEEEe
Confidence 887777776654
No 42
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.65 E-value=3.8e-14 Score=131.31 Aligned_cols=216 Identities=11% Similarity=0.081 Sum_probs=147.0
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEE--EEe-ccCCCeeEEEEEEeCCEEEEEEeeC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVE--AIN-QMEGSYFGEGLTLLGEKLFQVTWLQ 169 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~--~~~-~l~~~~FgeGit~~g~~LY~ltw~~ 169 (346)
++.+....+...+ .+++++|||+||.++...++..|.+||+++|+.. ... .....+.+..++.+++.||++.+.+
T Consensus 30 ~~~~~~~~~~~~p--~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 30 LTNDGLLAATQNP--TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp EEEEEEEEECSCC--CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT
T ss_pred EEEeeeeeccCCc--ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC
Confidence 4455566666666 6999999999887764224679999999988743 332 2344555555666788999999999
Q ss_pred CEEEEEECC---CCcEEEEEecCC-----------CceeEEeeCCCEEEEEC-CCCeEEEEeCC-CCcEEE--EEEeccC
Q 019103 170 KTGFIYDQN---NLNKLEEFTHQM-----------KDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVIR--KDIVRYK 231 (346)
Q Consensus 170 ~~v~V~D~~---tl~~i~ti~~~~-----------peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~-T~kvi~--~I~V~~~ 231 (346)
+.+.++|.+ +++.+.++.... +.+..+++||+ +|+++ ++++|+++|.+ +.++.. .+.....
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g 186 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG 186 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTT
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC
Confidence 999999986 566666665531 23478899999 99988 58899999987 555433 2233222
Q ss_pred CeeeeeceeeEee-CC-EEEEEecCCCeEEEEeCC--CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 232 GREVRNLNELEFI-KG-EVWANVWQTDCIARISHE--DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 232 G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~--TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
..|. .+.+. || +||+.....+.|.++|.+ +|+....-.+..+.. +......+++|||+|++++|||+
T Consensus 187 ~~p~----~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~i~~spdG~~l~v~ 257 (347)
T 3hfq_A 187 FGPR----HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA-----DYTAHNGAAAIRLSHDGHFLYVS 257 (347)
T ss_dssp CCEE----EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT-----TCCSCCEEEEEEECTTSCEEEEE
T ss_pred CCCc----eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC-----CCCCCCcceeEEECCCCCEEEEE
Confidence 1332 35555 45 699988888888887765 577533222211110 11223578999999999999999
Q ss_pred cCCCCcEEEEEEe
Q 019103 308 GKLWPKLYEINLR 320 (346)
Q Consensus 308 GK~Wp~l~ev~l~ 320 (346)
+..-+.|...++.
T Consensus 258 ~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 258 NRGYNTLAVFAVT 270 (347)
T ss_dssp EETTTEEEEEEEC
T ss_pred eCCCCEEEEEEEC
Confidence 8877777666654
No 43
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.64 E-value=1.4e-13 Score=124.86 Aligned_cols=214 Identities=7% Similarity=0.061 Sum_probs=151.4
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECC--CCcEE--EEeccCCCeeEEEEEEeCCEEEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE--TGKVE--AINQMEGSYFGEGLTLLGEKLFQVT 166 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~--Tgkv~--~~~~l~~~~FgeGit~~g~~LY~lt 166 (346)
+.+.+..+++...+ .++++++||+ ||+++. +...|.+||++ +|+.. ..+..+..+....++.+++.||++.
T Consensus 27 ~~~~~~~~~~~~~~--~~~~~spdg~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 102 (343)
T 1ri6_A 27 ALTLTQVVDVPGQV--QPMVVSPDKRYLYVGVR--PEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGS 102 (343)
T ss_dssp CEEEEEEEECSSCC--CCEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEE
T ss_pred cEEEeeeEecCCCC--ceEEECCCCCEEEEeec--CCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEe
Confidence 34677778887666 6999999985 777765 44699998887 77643 4455545554544555678899999
Q ss_pred eeCCEEEEEEC---CCCcEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCC-CcEEEE----EEeccCCeeee
Q 019103 167 WLQKTGFIYDQ---NNLNKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVIRK----DIVRYKGREVR 236 (346)
Q Consensus 167 w~~~~v~V~D~---~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T-~kvi~~----I~V~~~G~pv~ 236 (346)
+.++.+.++|. .+.+.+..++.. .+.+..+++||++||+++ +++.|+++|..+ .++... +.......|
T Consensus 103 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-- 180 (343)
T 1ri6_A 103 YNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGP-- 180 (343)
T ss_dssp TTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCE--
T ss_pred cCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCc--
Confidence 99999999999 566667776653 467788999999999998 789999999887 665432 222222223
Q ss_pred eceeeEee-CC-EEEEEecCCCeEEEEeC--CCCeE--EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 237 NLNELEFI-KG-EVWANVWQTDCIARISH--EDGVV--LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 237 ~lNELE~~-~G-~LyaNv~~sn~I~vID~--~TG~V--v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
+.+.+. +| ++|+....++.|.++|. ++|+. ...+.. +.. +......+.+|+|+|+++.||+++..
T Consensus 181 --~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~--~~~-----~~~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 181 --RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM--MPE-----NFSDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp --EEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC--SCT-----TCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred --ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc--cCc-----cccccCCccceEECCCCCEEEEEecC
Confidence 235554 34 69999888999999999 45665 333321 110 11123467899999999999999987
Q ss_pred CCcEEEEEEe
Q 019103 311 WPKLYEINLR 320 (346)
Q Consensus 311 Wp~l~ev~l~ 320 (346)
-+.++..++.
T Consensus 252 ~~~i~v~d~~ 261 (343)
T 1ri6_A 252 ASLITVFSVS 261 (343)
T ss_dssp TTEEEEEEEC
T ss_pred CCEEEEEEEc
Confidence 7777776664
No 44
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=6.1e-15 Score=139.54 Aligned_cols=191 Identities=10% Similarity=0.029 Sum_probs=135.8
Q ss_pred CcceeEEEecCCEEEEEcCC---CCCCeEEEEECCCCcEEEEeccCC-----CeeEEEEEEe--CCEEEEEEe---eCCE
Q 019103 105 AFTQGLLYAENDTLFESTGL---YGRSSVRRVALETGKVEAINQMEG-----SYFGEGLTLL--GEKLFQVTW---LQKT 171 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGl---yg~s~V~~iDl~Tgkv~~~~~l~~-----~~FgeGit~~--g~~LY~ltw---~~~~ 171 (346)
...+|++++++|+||+.... .+..+|.+||+++|+++..+.++. ..|..+++++ ++.+|+++. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 34579999999999997531 014699999999999988887753 2345677776 579999998 8899
Q ss_pred EEEEECCCCcEEEEEec-------------------------------CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCC
Q 019103 172 GFIYDQNNLNKLEEFTH-------------------------------QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQT 219 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~-------------------------------~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T 219 (346)
+.++|.++.+....+.. ..+.|.++++||++||+++ .++.|+.+|+..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~ 226 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD 226 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH
Confidence 99999998877664421 0247788899999999988 467999998642
Q ss_pred Cc--------EEEEEE-eccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCC
Q 019103 220 LK--------VIRKDI-VRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGI 289 (346)
Q Consensus 220 ~k--------vi~~I~-V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~ 289 (346)
.+ +...+. .+..|.| +-+.++ +|.||++.|..+.|.++|+++|++...+.. . ..
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~p----dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~-----------~~ 290 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPIC----DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD-E-----------KL 290 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSC----SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-G-----------GG
T ss_pred hcCCCCChhhhhcceEecccCCCC----ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-C-----------ce
Confidence 11 111111 1222322 346565 689999999999999999988986444422 1 12
Q ss_pred ceeeEEEEeCCCCEEEEecCCCC
Q 019103 290 DVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 290 ~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
..|.|||+++++ +||||.-..+
T Consensus 291 ~~p~~va~~~~g-~l~v~~~~~~ 312 (343)
T 2qe8_A 291 SWTDSFNFGSDG-YLYFDCNQLH 312 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECCGG
T ss_pred ecCCeeEECCCC-cEEEEeCccc
Confidence 368999999885 5777755443
No 45
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.62 E-value=2.2e-13 Score=123.48 Aligned_cols=188 Identities=12% Similarity=0.013 Sum_probs=136.3
Q ss_pred eeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 108 QGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 108 qGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
.|++++++ +.||++.. +..+|.++|++++++...+..+ -..+.|++++ +++||++++.++.+.++|.+......
T Consensus 39 ~gi~~d~~~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~-~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDI--SEPSIGRASLHGGEPTTIIRQD-LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEETTTTEEEEEET--TTTEEEEEESSSCCCEEEECTT-CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEEecCCCEEEEEEC--CCCEEEEEecCCCCcEEEEECC-CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 69999974 68999976 6679999999887654333322 1235778875 68999999999999999986433222
Q ss_pred EEec--CCCceeEEeeCCCEEEEECC---CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCe
Q 019103 185 EFTH--QMKDGWGLATDGKVLFGSDG---SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDC 257 (346)
Q Consensus 185 ti~~--~~peGwGLt~Dg~~LyvSdG---s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~ 257 (346)
-++. ..|.|..+++++++||++|. .+.|+.+++... ....+.-. .+..+|.|.+. +++||++.+..+.
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~----~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQD----NLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECT----TCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEEC----CCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 2222 25788888999999999984 469999987542 22222211 12244557665 5799999999999
Q ss_pred EEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 258 IARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|.++|++++.+...++. ...|.|||.+ +++||||...-+.|+.+..
T Consensus 191 I~~~~~~g~~~~~~~~~--------------~~~P~gi~~d--~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 191 AECLNPAQPGRRKVLEG--------------LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEEEETTEEEEEEEEEC--------------CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEEEecCCCceEEEecC--------------CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence 99999997766554421 2357999987 5899999888889998876
No 46
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.61 E-value=2e-13 Score=129.42 Aligned_cols=185 Identities=15% Similarity=0.101 Sum_probs=146.0
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
...++.+++++.+|++++ .+..|.+||+++++.+..+.. ...+.+..+..+++.+|++...++.+.++|.++.+.+.
T Consensus 171 ~v~~~~~~~~~~~~~s~~--~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 171 FVETISIPEHNELWVSQM--QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEEEGGGTEEEEEEG--GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ceeEEEEcCCCEEEEEEC--CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 446789988899999887 567999999999999888764 33343444444578899999999999999999999999
Q ss_pred EEecC-CCceeEEeeCCCEEEEEC--------CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEec
Q 019103 185 EFTHQ-MKDGWGLATDGKVLFGSD--------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVW 253 (346)
Q Consensus 185 ti~~~-~peGwGLt~Dg~~LyvSd--------Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~ 253 (346)
+++.. .+.+..+++||+.||++. +++.|+++|+.+.+++..+.... .+ ..+.+. +| ++|+...
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~----~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NK----RHIVSGNTENKIYVSDM 322 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CE----EEEEECSSTTEEEEEET
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--Cc----ceEEECCCCCEEEEEec
Confidence 88864 356666788999999976 35699999999999888775533 12 224444 34 8999998
Q ss_pred CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 254 QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
..+.|.++|+++++++..+... ..+++++++|+++.+|+++...+
T Consensus 323 ~~~~v~v~d~~~~~~~~~~~~~--------------~~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 323 CCSKIEVYDLKEKKVQKSIPVF--------------DKPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp TTTEEEEEETTTTEEEEEEECS--------------SSEEEEEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEECCCCcEEEEecCC--------------CCCCeEEEcCCCCEEEEEecCCC
Confidence 9999999999999999888541 24689999999999999987643
No 47
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.61 E-value=4.1e-14 Score=125.96 Aligned_cols=195 Identities=12% Similarity=0.169 Sum_probs=140.4
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
...|++++++|.||+++. ...|.+||++++... ...........+++.+ +++||++++.++.++++|..+.....
T Consensus 68 ~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp SCCCEEECTTCCEEEEET---TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred CcceeEECCCCCEEEEcC---CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 347999999999999976 359999999877543 3333332345677776 46799999999999999987765543
Q ss_pred EEecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEE
Q 019103 185 EFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIAR 260 (346)
Q Consensus 185 ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~v 260 (346)
....+ .|.|..+++||+ ||+++ +++.|+++|+.+.+....... . ...++.+.+. +|+||++.+..+.|.+
T Consensus 144 ~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~-~----~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVLPFT-D----ITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp CCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEECCCS-S----CCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred eccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEeeccc-C----CCCceEEEECCCCCEEEEECCCCcEEE
Confidence 32222 467778888886 99988 578999999988765432111 1 1223446565 5799999998999999
Q ss_pred EeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeeccc
Q 019103 261 ISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMKR 324 (346)
Q Consensus 261 ID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~~ 324 (346)
+|+++..+.. +.. .....|.|||++++++ +||++...++|..+++.+-..
T Consensus 218 ~~~~~~~~~~-~~~------------~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 218 LLAGSTTSTV-LPF------------TGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ECTTCSCCEE-CCC------------CSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred EcCCCCccee-ecc------------CCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 9998776432 111 1124689999999985 999999999999998875443
No 48
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.61 E-value=3.7e-14 Score=128.34 Aligned_cols=172 Identities=10% Similarity=0.018 Sum_probs=135.1
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCC---CeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecC----
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEG---SYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ---- 189 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~---~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~---- 189 (346)
.++++++ +++.|.+||+.+++++..+.++. .+.+..++.+++.+|++...++.+.++|..+++.+.+++.+
T Consensus 2 ~~~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPA--RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEE--TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcC--CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 3555655 56799999999999999998877 56555555577899999999999999999999999988862
Q ss_pred ---CCceeEEeeCCCEEEEEC------------CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEe
Q 019103 190 ---MKDGWGLATDGKVLFGSD------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANV 252 (346)
Q Consensus 190 ---~peGwGLt~Dg~~LyvSd------------Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv 252 (346)
.+.+..+++||++||+++ .++.|+++|+++++++..+.++.. + +.+.+. +| +||+.
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~----~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--I----TMLAWARDGSKLYGL- 152 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--C----CCEEECTTSSCEEEE-
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC--c----ceeEECCCCCEEEEe-
Confidence 467888999999999986 468999999999999988887542 2 234444 44 68888
Q ss_pred cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCc
Q 019103 253 WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPK 313 (346)
Q Consensus 253 ~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~ 313 (346)
++.|.++|+++++++..++.... ...++++|+++.+|+++.....
T Consensus 153 --~~~i~~~d~~~~~~~~~~~~~~~--------------~~~~~~s~dg~~l~~~~~~~~~ 197 (337)
T 1pby_B 153 --GRDLHVMDPEAGTLVEDKPIQSW--------------EAETYAQPDVLAVWNQHESSGV 197 (337)
T ss_dssp --SSSEEEEETTTTEEEEEECSTTT--------------TTTTBCCCBCCCCCCCCTTTTE
T ss_pred --CCeEEEEECCCCcEeeeeecccc--------------CCCceeCCCccEEeeeccCCCc
Confidence 67899999999999988865221 0123688999988888876654
No 49
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=1.1e-13 Score=129.63 Aligned_cols=181 Identities=11% Similarity=0.093 Sum_probs=131.2
Q ss_pred ceeEEEecCCEEEEEcCCCC----------------------CCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEE
Q 019103 107 TQGLLYAENDTLFESTGLYG----------------------RSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLF 163 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg----------------------~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY 163 (346)
..|++++++|++|++..... ++.|.++|.++|+++.......-..+.|++++ +++||
T Consensus 26 v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 26 VSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEE
T ss_pred ceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEE
Confidence 46999999999999876221 14799999999999876654332345778886 35699
Q ss_pred EEEeeCCEEEEEECCCCc-EEEEEec-----------CCCceeEEeeCCCEEEEECC--CCeEEEEeCCCCcEEEEEEec
Q 019103 164 QVTWLQKTGFIYDQNNLN-KLEEFTH-----------QMKDGWGLATDGKVLFGSDG--SSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 164 ~ltw~~~~v~V~D~~tl~-~i~ti~~-----------~~peGwGLt~Dg~~LyvSdG--s~~l~vIDp~T~kvi~~I~V~ 229 (346)
+++..++.|.++|++... .+.++.. ..|.|.+++++++.||++|+ .+.|.++|+ +++.+..+...
T Consensus 106 v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~ 184 (329)
T 3fvz_A 106 VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEE 184 (329)
T ss_dssp EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEE
T ss_pred EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccC
Confidence 999999999999986542 5555531 13566677776788999993 789999994 67777666443
Q ss_pred cCC-----eeeeeceeeEee-C-CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeC
Q 019103 230 YKG-----REVRNLNELEFI-K-GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDS 299 (346)
Q Consensus 230 ~~G-----~pv~~lNELE~~-~-G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~ 299 (346)
..+ ..+..++.+.+. + |+|||+.+..+.|.++|+++|+.+.++..... +.-+.++++.|
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~-----------~~~~~~~~~~p 250 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF-----------GRNVFAISYIP 250 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT-----------TTCEEEEEEET
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc-----------CCCcceeeecC
Confidence 221 133345557665 4 89999999999999999999999999855221 22456777777
No 50
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.60 E-value=2.4e-13 Score=126.59 Aligned_cols=208 Identities=12% Similarity=0.131 Sum_probs=144.1
Q ss_pred CceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEE
Q 019103 88 PSIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVT 166 (346)
Q Consensus 88 ~~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~lt 166 (346)
+...+.+++.++|.+ .+.+|++++++|+||++.. ...+|.+||+++ ++......+..+ .|++++ +++||+++
T Consensus 17 ~~~~~~~~~~~~p~~--~~pegia~~~~g~lyv~d~--~~~~I~~~d~~g-~~~~~~~~~~~p--~gia~~~dG~l~vad 89 (306)
T 2p4o_A 17 IELAPAKIITSFPVN--TFLENLASAPDGTIFVTNH--EVGEIVSITPDG-NQQIHATVEGKV--SGLAFTSNGDLVATG 89 (306)
T ss_dssp BCCCCEEEEEEECTT--CCEEEEEECTTSCEEEEET--TTTEEEEECTTC-CEEEEEECSSEE--EEEEECTTSCEEEEE
T ss_pred CcCCCceEeEeCCCC--CCcceEEECCCCCEEEEeC--CCCeEEEECCCC-ceEEEEeCCCCc--eeEEEcCCCcEEEEe
Confidence 344578999999975 5569999999999999975 456999999986 565666666554 567765 35699999
Q ss_pred eeCC--EEEEEECCCCcEEEEEecC---CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEec-----cCCeee
Q 019103 167 WLQK--TGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR-----YKGREV 235 (346)
Q Consensus 167 w~~~--~v~V~D~~tl~~i~ti~~~---~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~-----~~G~pv 235 (346)
+..+ .++++|..++++..-...+ .++|..+ .++..+|++| +.+.|+++|+.+.+..-...-+ ..-..+
T Consensus 90 ~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~-~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 90 WNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITP-LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp ECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEE-SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred ccCCcceEEEEcCCCCeEEEEEeCCCccccCcccc-cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 8754 5899998887765433321 3444444 3466899999 5889999999875321110000 000123
Q ss_pred eeceeeEeeCCEEEEEecCCCeEEEEeCCC-CeEE--EEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 236 RNLNELEFIKGEVWANVWQTDCIARISHED-GVVL--GWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 236 ~~lNELE~~~G~LyaNv~~sn~I~vID~~T-G~Vv--~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
...|-+...+++||++....+.|.++|++. |++- ..+ .....|.|||+|++| +|||+...-+
T Consensus 169 ~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~--------------~~~~~P~gi~vd~dG-~l~va~~~~~ 233 (306)
T 2p4o_A 169 PAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF--------------VEQTNIDDFAFDVEG-NLYGATHIYN 233 (306)
T ss_dssp CSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE--------------EESCCCSSEEEBTTC-CEEEECBTTC
T ss_pred CcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE--------------eccCCCCCeEECCCC-CEEEEeCCCC
Confidence 355667555679999999999999999975 5421 111 001358999999998 5899987778
Q ss_pred cEEEEE
Q 019103 313 KLYEIN 318 (346)
Q Consensus 313 ~l~ev~ 318 (346)
.|+.+.
T Consensus 234 ~V~~~~ 239 (306)
T 2p4o_A 234 SVVRIA 239 (306)
T ss_dssp CEEEEC
T ss_pred eEEEEC
Confidence 888874
No 51
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.60 E-value=1.2e-12 Score=122.85 Aligned_cols=218 Identities=13% Similarity=0.235 Sum_probs=149.7
Q ss_pred ceeeeEEE-EEEecCCCCcceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEE
Q 019103 89 SIYTIQVV-NEFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQV 165 (346)
Q Consensus 89 ~~~t~~Vv-~t~phd~~~FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~l 165 (346)
+.|.+.+. +.+|--... ..||+++++ ++||..+. ++..|..+|+. |+++++++++...=.|||++.+ +++|++
T Consensus 11 ~~y~~~~~~~~l~g~~~~-lSGla~~~~~~~L~aV~d--~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs 86 (255)
T 3qqz_A 11 QNYHATIDGKEIAGITNN-ISSLTWSAQSNTLFSTIN--KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVIS 86 (255)
T ss_dssp TTCEEEEEEEECTTCCSC-EEEEEEETTTTEEEEEEE--TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEE
T ss_pred cceEEEEeceECCCcccC-cceeEEeCCCCEEEEEEC--CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEE
Confidence 44555555 445533333 479999975 58998766 47799999998 9999999987533469999976 677788
Q ss_pred EeeCCEEEEEECCCCc---EEEEEecC---CC-----ceeEEeeCCCEEEEEC-CCC-eEEEEe--CCC--CcEEEEEEe
Q 019103 166 TWLQKTGFIYDQNNLN---KLEEFTHQ---MK-----DGWGLATDGKVLFGSD-GSS-MLYQID--PQT--LKVIRKDIV 228 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~---~i~ti~~~---~p-----eGwGLt~Dg~~LyvSd-Gs~-~l~vID--p~T--~kvi~~I~V 228 (346)
...++.+++|+..+.. .+.++..+ .+ ||.+.++++++||++. .+. .|+.+| +.+ +++...-..
T Consensus 87 ~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 87 DERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHH
T ss_pred ECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhh
Confidence 8899999999865433 34555432 23 8999999999999977 444 899998 222 222110000
Q ss_pred ccCCeeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEE
Q 019103 229 RYKGREVRNLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFV 306 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfV 306 (346)
. ....+..+-.|.++ .|++|+-.-.++.|+++|.+ |+++..+++..-...+. .....|.|||+|++|+ |||
T Consensus 167 ~-~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~----~~~~qpEGia~d~~G~-lyI 239 (255)
T 3qqz_A 167 Q-RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLS----HNIKQAEGVAMDASGN-IYI 239 (255)
T ss_dssp H-HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCS----SCCCSEEEEEECTTCC-EEE
T ss_pred c-cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcc----cccCCCCeeEECCCCC-EEE
Confidence 0 11122234456666 58999999999999999966 77999998842111111 1234789999999985 999
Q ss_pred ecCCCCcEEEEE
Q 019103 307 TGKLWPKLYEIN 318 (346)
Q Consensus 307 TGK~Wp~l~ev~ 318 (346)
++.- +.+|+.+
T Consensus 240 vsE~-n~~y~f~ 250 (255)
T 3qqz_A 240 VSEP-NRFYRFT 250 (255)
T ss_dssp EETT-TEEEEEE
T ss_pred EcCC-ceEEEEE
Confidence 9776 5777664
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=2.1e-13 Score=123.72 Aligned_cols=196 Identities=13% Similarity=0.181 Sum_probs=139.9
Q ss_pred ceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEE-eccCC---CeeEEEEEEe-CCEEEEEEeeC-----------
Q 019103 107 TQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAI-NQMEG---SYFGEGLTLL-GEKLFQVTWLQ----------- 169 (346)
Q Consensus 107 TqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~-~~l~~---~~FgeGit~~-g~~LY~ltw~~----------- 169 (346)
..|++++++ |+||+++. + +.|.+||++ |++... ..... .....+++.+ ++++|+++...
T Consensus 73 ~~~i~~~~~~g~l~v~~~--~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 73 PAGCQCDRDANQLFVADM--R-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp EEEEEECSSSSEEEEEET--T-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CceEEEecCCCcEEEEEC--C-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 369999998 89999875 3 389999999 887654 32211 1223556765 36799998765
Q ss_pred ----CEEEEEECCCCcEEEEEec-CCCceeEEe----eCCCEEEEEC-CCCeEEEEeCC-CCcEEEEEEe-ccCCeeeee
Q 019103 170 ----KTGFIYDQNNLNKLEEFTH-QMKDGWGLA----TDGKVLFGSD-GSSMLYQIDPQ-TLKVIRKDIV-RYKGREVRN 237 (346)
Q Consensus 170 ----~~v~V~D~~tl~~i~ti~~-~~peGwGLt----~Dg~~LyvSd-Gs~~l~vIDp~-T~kvi~~I~V-~~~G~pv~~ 237 (346)
+.++++|++ .+....+.. ..+.|..++ +||+.||+++ +++.|+++|++ +.+....-.. ...+.....
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~ 227 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG 227 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE
T ss_pred cCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC
Confidence 689999987 555443332 246888889 9999999998 57899999976 4443221111 111110012
Q ss_pred ceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 238 LNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 238 lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
++.+.+. +|.||++.+..+.|.++|+++|+++..+.++ ...+.+|++++++++|||++...+.|+.
T Consensus 228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~-------------~~~~~~i~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-------------FEKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-------------SSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC-------------CCCceeEEECCCCCEEEEEeCCCCeEEE
Confidence 2345555 6899999988899999999999988877552 1357999999999999999988889999
Q ss_pred EEEe
Q 019103 317 INLR 320 (346)
Q Consensus 317 v~l~ 320 (346)
+++.
T Consensus 295 ~~~~ 298 (314)
T 1pjx_A 295 FEWQ 298 (314)
T ss_dssp EECS
T ss_pred EeCC
Confidence 8864
No 53
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.59 E-value=4.2e-13 Score=131.64 Aligned_cols=206 Identities=13% Similarity=0.138 Sum_probs=144.7
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC-EEEEEECCCCcEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK-TGFIYDQNNLNKLE 184 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~-~v~V~D~~tl~~i~ 184 (346)
...||+++++++||++.. +...|++||++++++.........+. ..++.+++.||++++..+ .++++|+.+.....
T Consensus 132 ~P~~la~d~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CEEEEEECSTTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CceEEEEeCCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 347999999999999976 66799999999998876665544444 445556789999999776 99999998766555
Q ss_pred EE----e-c-CCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeee-ceeeEee--CCEEEEEecCC
Q 019103 185 EF----T-H-QMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN-LNELEFI--KGEVWANVWQT 255 (346)
Q Consensus 185 ti----~-~-~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~-lNELE~~--~G~LyaNv~~s 255 (346)
.+ + . ..|.+.++++++++||++|..++|+.+|+++.+....-..+..|..-.+ .|.+.+. +|+||++....
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 55 2 2 2578888999889999999888999999998764221111122211111 1256666 58999999999
Q ss_pred CeEEEEeCCCCeEEEEEECC---chhhhhhhccCCCCceeeEEEEeCCCCEEEEecC-CCCcEEEEE
Q 019103 256 DCIARISHEDGVVLGWVLLP---NLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK-LWPKLYEIN 318 (346)
Q Consensus 256 n~I~vID~~TG~Vv~~I~l~---~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK-~Wp~l~ev~ 318 (346)
+.|.++|++. ++.....-. +...... .......|+|||++++++ |||+.. .-..|+++.
T Consensus 289 ~~I~~~~~~g-~~~~~~g~~~~~g~~dg~~--~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 289 SSVYKITPDG-ECEWFCGSATQKTVQDGLR--EEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLD 351 (409)
T ss_dssp TEEEEECTTC-CEEEEEECTTCCSCBCEEG--GGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEE
T ss_pred CEEEEEecCC-CEEEEEeCCCCCCcCCCcc--cccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEE
Confidence 9999999864 443333221 0000000 001235799999999987 999988 778888887
No 54
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.57 E-value=9.8e-13 Score=124.23 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=129.2
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCC---CcEEEE-Eec--
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN---LNKLEE-FTH-- 188 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~t---l~~i~t-i~~-- 188 (346)
.|+.+++ ..|+++|++++++...++.... ++|++.+ +++||.++..+++|+++|.++ +....+ ++.
T Consensus 3 ~ll~~~~----~~I~~i~~~~~~~~~~~~~~~~--p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 3 YLFFTNR----HEVRKMTLDRSEYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp EEEEECB----SSEEEEETTSCCCEEEECSCSS--EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred EEEEECC----CeEEEEECCCcceEehhcCCCc--eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 4677765 4899999999987766654344 5777776 589999999999999999886 122222 332
Q ss_pred CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCC
Q 019103 189 QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHE 264 (346)
Q Consensus 189 ~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~ 264 (346)
..|+|.++++.++.||++| +.+.|.++|++.......+.. ....| +.+.++ +|+||++.|.. +.|.++|++
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P----~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKP----RAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-TTCCE----EEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-CCCCc----ceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 2589989988899999999 588999999876443322221 22234 456665 78999999986 799999985
Q ss_pred CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 265 DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
|+....+-.. ....|||||+|+++++||++...-.+|+.+.+.
T Consensus 152 -G~~~~~~~~~------------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 152 -GVDIYSLVTE------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp -SCCEEEEECS------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -CCCeEEEEEC------------CCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 4433333111 124799999999999999999888899988764
No 55
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=9.4e-13 Score=118.96 Aligned_cols=191 Identities=12% Similarity=0.113 Sum_probs=137.5
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-----CCeeEEEEEEe--CCEEEEEEee-CCEEEEEEC
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-----GSYFGEGLTLL--GEKLFQVTWL-QKTGFIYDQ 177 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-----~~~FgeGit~~--g~~LY~ltw~-~~~v~V~D~ 177 (346)
...++++++++.||++.. +...|.+||++ |+.+..+... ......+++++ +++||++++. ++.+.++|
T Consensus 31 ~p~~v~~~~~g~l~v~~~--~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADT--NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEG--GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred CCceEEECCCCCEEEEEC--CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 347999999999999965 45699999988 6666666431 11245778883 6899999975 89999999
Q ss_pred CCCcEEEEEecC---CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEe
Q 019103 178 NNLNKLEEFTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANV 252 (346)
Q Consensus 178 ~tl~~i~ti~~~---~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv 252 (346)
.+.+.+.++..+ .|.+..+++||+ +|+++ +++.|+++|+. .+.+.++..... ...++.+.+. +|++|++.
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGCSKH---LEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEECTTT---CSSEEEEEECSSSEEEEEE
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCCCCc---cCCcEEEEECCCCCEEEEE
Confidence 678888888642 356666777775 88887 57899999975 566655544221 1123446665 68999999
Q ss_pred cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC-cEEEEE
Q 019103 253 WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP-KLYEIN 318 (346)
Q Consensus 253 ~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp-~l~ev~ 318 (346)
...+.|.++|+ +|+.+..+...+ ....|+|||+++++ ++||++..-. .|+...
T Consensus 182 ~~~~~i~~~~~-~g~~~~~~~~~g-----------~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 182 NRAHCVKVFNY-EGQYLRQIGGEG-----------ITNYPIGVGINSNG-EILIADNHNNFNLTIFT 235 (286)
T ss_dssp GGGTEEEEEET-TCCEEEEESCTT-----------TSCSEEEEEECTTC-CEEEEECSSSCEEEEEC
T ss_pred CCCCEEEEEcC-CCCEEEEEccCC-----------ccCCCcEEEECCCC-CEEEEeCCCCEEEEEEC
Confidence 98999999998 566666663211 12468999999987 6888876554 666553
No 56
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=1.5e-12 Score=119.95 Aligned_cols=205 Identities=12% Similarity=0.151 Sum_probs=139.3
Q ss_pred cceeEEEecCCEEEEEcCCC--CCCeEEEEECCCCcEEEEec-cCCCeeEEEEEEe-CCEEEEEEee------CCEEEEE
Q 019103 106 FTQGLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAINQ-MEGSYFGEGLTLL-GEKLFQVTWL------QKTGFIY 175 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGly--g~s~V~~iDl~Tgkv~~~~~-l~~~~FgeGit~~-g~~LY~ltw~------~~~v~V~ 175 (346)
...+++++++|+||+++... +...|.+||++++++..... ........+++.+ ++++|+++.. .+.++++
T Consensus 88 ~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~ 167 (333)
T 2dg1_A 88 NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYV 167 (333)
T ss_dssp SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEE
T ss_pred CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEE
Confidence 34799999999999987521 12589999999998754432 2222234556665 3679999875 4789999
Q ss_pred ECCCCcEEEEEec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCC-CcEEEE----EEeccCCeeeeeceeeEee-CCE
Q 019103 176 DQNNLNKLEEFTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQT-LKVIRK----DIVRYKGREVRNLNELEFI-KGE 247 (346)
Q Consensus 176 D~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T-~kvi~~----I~V~~~G~pv~~lNELE~~-~G~ 247 (346)
|+++.+...-... ..+.+..+++||+.||+++ +.+.|+++|+++ .+.... +.....+. ..++.+.+. +|.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~ 245 (333)
T 2dg1_A 168 SPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH--EGPDSCCIDSDDN 245 (333)
T ss_dssp CTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS--SEEEEEEEBTTCC
T ss_pred eCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC--CCCCceEECCCCC
Confidence 9887654432222 2467788899999999987 578999999864 332221 22111110 122335555 689
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC-----CCcEEEEEEe
Q 019103 248 VWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL-----WPKLYEINLR 320 (346)
Q Consensus 248 LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~-----Wp~l~ev~l~ 320 (346)
+|+..+..+.|.++|+ +|+.+..+.++.-.. + ....+.++|++|++++|||++.. ...||+|++.
T Consensus 246 l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~-----g--~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 246 LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE-----G--HMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EEEEEETTTEEEEECT-TSCEEEEEECTTGGG-----T--CSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EEEEEcCCCEEEEECC-CCCEEEEEEcCCCcc-----c--cccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 9999988899999999 688888886532100 0 01257899999999999998776 3589999864
No 57
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.55 E-value=6.4e-13 Score=120.49 Aligned_cols=211 Identities=9% Similarity=0.031 Sum_probs=144.3
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEEC---CCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL---ETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl---~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw 167 (346)
+.+.+.+++....+ .++.+++|++ ||++.. +++.|.+||+ .+++....+.....+.+..++.+++.||++..
T Consensus 73 ~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 73 ALTFAAESALPGSL--THISTDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp CEEEEEEEECSSCC--SEEEECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG
T ss_pred ceeeccccccCCCC--cEEEEcCCCCEEEEEec--CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecC
Confidence 45667777764444 7999999985 777765 5678999999 44555666555555555555666789999998
Q ss_pred eCCEEEEEECCC-CcEEE----EEec--C-CCceeEEeeCCCEEEEEC-CCCeEEEEeCC--CCcE--EEEEEeccCC-e
Q 019103 168 LQKTGFIYDQNN-LNKLE----EFTH--Q-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ--TLKV--IRKDIVRYKG-R 233 (346)
Q Consensus 168 ~~~~v~V~D~~t-l~~i~----ti~~--~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~--T~kv--i~~I~V~~~G-~ 233 (346)
.++.+.++|..+ .+... .+.. + .+.+..+++||++||+++ .++.|.++|.. +.+. ...+.....+ .
T Consensus 149 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 149 KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 899999999887 55433 2332 2 355677899999999987 68899999984 4443 3333321111 0
Q ss_pred eeeeceeeEee-CC-EEEEEecCCCeEEEEeCC----CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 234 EVRNLNELEFI-KG-EVWANVWQTDCIARISHE----DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 234 pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~----TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
.......+.+. +| +||+.....+.|.++|.+ +.+.+..+... . .+.+++|+|+++.||++
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-------------~-~~~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-------------T-QPRGFNVDHSGKYLIAA 294 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-------------S-SCCCEEECTTSSEEEEE
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-------------C-ccceEEECCCCCEEEEe
Confidence 11122235555 34 899988888999999988 34555555431 1 26889999999999999
Q ss_pred cCCCCcEEEEEEe
Q 019103 308 GKLWPKLYEINLR 320 (346)
Q Consensus 308 GK~Wp~l~ev~l~ 320 (346)
+...+.+...++.
T Consensus 295 ~~~~~~v~v~~~d 307 (343)
T 1ri6_A 295 GQKSHHISVYEIV 307 (343)
T ss_dssp CTTTCEEEEEEEE
T ss_pred cCCCCeEEEEEEc
Confidence 9776766655443
No 58
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.55 E-value=2.2e-12 Score=116.50 Aligned_cols=192 Identities=13% Similarity=0.112 Sum_probs=136.1
Q ss_pred cceeEEEe-cCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCCEEEEEECCCCcEE
Q 019103 106 FTQGLLYA-ENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 106 FTqGL~~~-~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
...+++++ ++++||+++.. +...|.+|| .+|+.+..+..+......+++.+. +++|+++..++.+.++|+ +.+.+
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~-~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 154 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERS-PTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVL 154 (286)
T ss_dssp SEEEEEEETTTTEEEEEECG-GGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEE
T ss_pred CceEEEEEcCCCeEEEEcCC-CCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEE
Confidence 45799994 78899999741 257999999 678887777655433456777753 579999999999999996 46777
Q ss_pred EEEecC----CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCC-
Q 019103 184 EEFTHQ----MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTD- 256 (346)
Q Consensus 184 ~ti~~~----~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn- 256 (346)
.++... .|.+..+++||+ +|++| +++.|+++|+. .+.+.++.. .|. ...++.+.+. +|+|||+.+..+
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~--~g~-~~~p~~i~~d~~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYE-GQYLRQIGG--EGI-TNYPIGVGINSNGEILIADNHNNF 229 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETT-CCEEEEESC--TTT-SCSEEEEEECTTCCEEEEECSSSC
T ss_pred EEeCCCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCC-CCEEEEEcc--CCc-cCCCcEEEECCCCCEEEEeCCCCE
Confidence 777531 355666667665 99988 58899999985 455555433 221 1123346555 689999998887
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.|.++|+ +|+.+..+.... ....|.+||++|++ ++|||+. ..+|+..++
T Consensus 230 ~i~~~~~-~g~~~~~~~~~~-----------~~~~~~~i~~~~~g-~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 230 NLTIFTQ-DGQLISALESKV-----------KHAQCFDVALMDDG-SVVLASK-DYRLYIYRY 278 (286)
T ss_dssp EEEEECT-TSCEEEEEEESS-----------CCSCEEEEEEETTT-EEEEEET-TTEEEEEEC
T ss_pred EEEEECC-CCCEEEEEcccC-----------CCCcceeEEECCCC-cEEEECC-CCeEEEEEc
Confidence 9999996 577777775411 12358899999987 5999975 466665554
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.55 E-value=3.3e-12 Score=118.24 Aligned_cols=210 Identities=10% Similarity=0.017 Sum_probs=136.7
Q ss_pred eEEEEEE-ecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECC-CCcE--EEEeccCC-C-------eeEEEEEE--
Q 019103 93 IQVVNEF-PHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE-TGKV--EAINQMEG-S-------YFGEGLTL-- 157 (346)
Q Consensus 93 ~~Vv~t~-phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~-Tgkv--~~~~~l~~-~-------~FgeGit~-- 157 (346)
.+.+.++ .+...+ .++++++||+ ||+++. ++..|.+||++ +|+. +..+.... . ....+++.
T Consensus 75 ~~~~~~~~~~~~~p--~~~a~spdg~~l~~~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp 150 (347)
T 3hfq_A 75 AHKLNTVVAPGTPP--AYVAVDEARQLVYSANY--HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP 150 (347)
T ss_dssp EEEEEEEEEESCCC--SEEEEETTTTEEEEEET--TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT
T ss_pred EEEeeeeecCCCCC--EEEEECCCCCEEEEEeC--CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC
Confidence 3455553 344455 6999999985 887764 55799999985 4443 33333321 1 12333444
Q ss_pred eCCEEEEEEeeCCEEEEEECC-CCcE--EEEEec--C-CCceeEEeeCCCEEEEEC-CCCeEEEEeCC--CCcEE--EEE
Q 019103 158 LGEKLFQVTWLQKTGFIYDQN-NLNK--LEEFTH--Q-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ--TLKVI--RKD 226 (346)
Q Consensus 158 ~g~~LY~ltw~~~~v~V~D~~-tl~~--i~ti~~--~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~--T~kvi--~~I 226 (346)
+++ +|+++..++.+.++|.+ +++. +..+.. + .|.+..++|||++||+++ +++.|.++|.. +.+.. ..+
T Consensus 151 dg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 229 (347)
T 3hfq_A 151 DNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV 229 (347)
T ss_dssp TSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred CCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence 566 99999999999999988 4443 333333 2 356678999999999976 68888887754 45543 233
Q ss_pred EeccCCe-eeeeceeeEee-CC-EEEEEecCCCeEEEEeCC---CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCC
Q 019103 227 IVRYKGR-EVRNLNELEFI-KG-EVWANVWQTDCIARISHE---DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSN 300 (346)
Q Consensus 227 ~V~~~G~-pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~---TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~ 300 (346)
.....+. .....+.+.+. || +||+.....+.|.++|.+ +.+.+..+... +..|.++||+|+
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~~spd 296 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTE-------------GDFPRDFDLDPT 296 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECS-------------SSCCCEEEECTT
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecC-------------CCCcCeEEECCC
Confidence 3221110 00123345555 45 699998889999999987 33555555431 235789999999
Q ss_pred CCEEEEecCCCCcEEEEEEe
Q 019103 301 RNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 301 ~~~LfVTGK~Wp~l~ev~l~ 320 (346)
++.|||++..-+.+...++.
T Consensus 297 g~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEcCCCcEEEEEEe
Confidence 99999999887776655543
No 60
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=6.3e-12 Score=112.32 Aligned_cols=189 Identities=13% Similarity=0.076 Sum_probs=134.6
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCcE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
....+++++++|.+|+++. +...|.++|++ |++. .+.++ ......+++.+ ++++|+++..++.++++|++ .+.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTEN--GANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp CCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred CcceeEEECCCCCEEEEec--CCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 4457999999999999976 56699999999 8764 34433 22345677876 57899999989999999987 555
Q ss_pred EEEEec--C--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCC
Q 019103 183 LEEFTH--Q--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTD 256 (346)
Q Consensus 183 i~ti~~--~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn 256 (346)
. ++.. . .|.+..++++|+ ||+++ +++.|+.+|+ +.+... +...... ..++.+.+. +|.||+.....+
T Consensus 137 ~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~---~~~~~i~~d~~g~l~v~~~~~~ 209 (300)
T 2qc5_A 137 Y-EYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEE-YPLPTNA---AAPVGITSGNDGALWFVEIMGN 209 (300)
T ss_dssp E-EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEE-EECSSTT---CCEEEEEECTTSSEEEEETTTT
T ss_pred E-EccCCCCCCCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEE-eeCCCCC---CCcceEEECCCCCEEEEccCCC
Confidence 4 3332 1 345555666776 88887 5789999999 666553 4432211 123345555 689999998889
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.|.++|+ +|++... .++. ....|.+|+++++++ +||+...-..|+.+..
T Consensus 210 ~i~~~~~-~g~~~~~-~~~~-----------~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 210 KIGRITT-TGEISEY-DIPT-----------PNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEEECT-TCCEEEE-ECSS-----------TTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred EEEEEcC-CCcEEEE-ECCC-----------CCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 9999999 7876553 2211 124689999999876 9999877788887753
No 61
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.53 E-value=3.9e-12 Score=118.68 Aligned_cols=212 Identities=11% Similarity=0.094 Sum_probs=136.8
Q ss_pred eEEEEEEecCCCCcceeEEEecCCE-EEEEcCCC-CCCeEEEEEC--CCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEe
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLY-GRSSVRRVAL--ETGKVEAINQME-GSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGly-g~s~V~~iDl--~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw 167 (346)
++.+... +...+ .+++++|||+ ||.++... +...|.+|++ ++|++....... ......+++.+++.||++++
T Consensus 41 ~~~~~~~-~~~~p--~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~ 117 (361)
T 3scy_A 41 SLPLSDA-EVANP--SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANY 117 (361)
T ss_dssp EEEEEEE-ECSCC--CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEET
T ss_pred EEEeecc-cCCCC--ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEEC
Confidence 4455555 55566 6899999985 77775521 2358877655 457654333222 12234567778889999999
Q ss_pred eCCEEEEEECCCCcEEEEE----ecC--C----------CceeEEeeCCCEEEEEC-CCCeEEEEeCC--CC----c-EE
Q 019103 168 LQKTGFIYDQNNLNKLEEF----THQ--M----------KDGWGLATDGKVLFGSD-GSSMLYQIDPQ--TL----K-VI 223 (346)
Q Consensus 168 ~~~~v~V~D~~tl~~i~ti----~~~--~----------peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~--T~----k-vi 223 (346)
.++.+.++|.++...+.++ ... . +.+..++|||++||+++ +++.|.++|.. +. + +.
T Consensus 118 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 118 SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence 9999999998754444332 211 1 14478899999999988 68888888644 32 2 21
Q ss_pred -----EEEEeccCCeeeeeceeeEee-CC-EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEE
Q 019103 224 -----RKDIVRYKGREVRNLNELEFI-KG-EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIA 296 (346)
Q Consensus 224 -----~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA 296 (346)
..+.......|. .+.+. || +||+.....+.|.++|.++|++...-.+..+. .....+.+|+
T Consensus 198 ~~~~~~~~~~~~~~~~~----~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~--------~~~~~~~~i~ 265 (361)
T 3scy_A 198 TKGTPEAFKVAPGSGPR----HLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT--------VNAQGSGDIH 265 (361)
T ss_dssp EEEEEEEEECCTTCCEE----EEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS--------SCCCCEEEEE
T ss_pred ecccccceecCCCCCCe----EEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC--------CCCCCcccEE
Confidence 233332222332 35554 45 79999988999999999999764333221111 1123568999
Q ss_pred EeCCCCEEEEecCC-CCcEEEEEE
Q 019103 297 WDSNRNRIFVTGKL-WPKLYEINL 319 (346)
Q Consensus 297 ~d~~~~~LfVTGK~-Wp~l~ev~l 319 (346)
|+|++++||+++.. -+.+.-.++
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~ 289 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKV 289 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEE
Confidence 99999999999987 666555444
No 62
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.52 E-value=1.3e-12 Score=127.13 Aligned_cols=182 Identities=13% Similarity=0.068 Sum_probs=134.0
Q ss_pred CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEecC--C
Q 019103 115 NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--M 190 (346)
Q Consensus 115 d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~ 190 (346)
...|+.+.. +.|+++|++++++...+.-... ++|++.+ +++||.++..+++|+++|++.......+..+ .
T Consensus 87 ~~~l~~~~~----~~I~~i~~~~~~~~~~~~~~~~--~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 160 (386)
T 3v65_B 87 EPVLLFANR----IDIRQVLPHRSEYTLLLNNLEN--AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 160 (386)
T ss_dssp CCEEEEECB----SCEEEECTTSCCCEEEECSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC
T ss_pred cceeEeecC----ccceeeccCCCcEEEEecCCCc--cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC
Confidence 346777754 5899999998876655543333 5677776 5899999999999999999876544444432 6
Q ss_pred CceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCCCC
Q 019103 191 KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHEDG 266 (346)
Q Consensus 191 peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~TG 266 (346)
|+|.++++.++.||++| +.+.|.++|+...... .+.-.. +..++.+... +|+||++.|.. +.|.++|++..
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~-~l~~~~----l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-VLLWQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE-EEECSS----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE-EeecCC----CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 89999999999999999 5889999998754322 222211 2233556665 78999999988 89999998754
Q ss_pred eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 267 VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 267 ~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.....+.. ....|||||+|+++++||++...-.+|+.+.+.
T Consensus 236 ~~~~~~~~-------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 236 GRRIIADT-------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SCEEEECS-------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CcEEEEEC-------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 43332211 123689999999999999998888889988764
No 63
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.52 E-value=2.1e-12 Score=124.09 Aligned_cols=182 Identities=13% Similarity=0.085 Sum_probs=132.8
Q ss_pred CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEec--CC
Q 019103 115 NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTH--QM 190 (346)
Q Consensus 115 d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~--~~ 190 (346)
+..|+.++. +.|+++|++..+....+.-... ++|++.+ +++||.++..+++|+.+|++......-+.. ..
T Consensus 44 ~~~ll~~~~----~~I~~i~~~g~~~~~~~~~~~~--~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 117 (349)
T 3v64_C 44 EPVLLFANR----IDIRQVLPHRSEYTLLLNNLEN--AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 117 (349)
T ss_dssp CCEEEEECB----SCEEEECTTSCCEEEEECSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred CceeEeecc----cceEEEeCCCCeeEEeecCCCc--eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC
Confidence 346777755 4799999998877655543344 4667765 589999999999999999987654443433 35
Q ss_pred CceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCCCC
Q 019103 191 KDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHEDG 266 (346)
Q Consensus 191 peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~TG 266 (346)
|+|+++++.++.||++| +.+.|.++|++.... ..+.-.. +..+|.+.+. +|.||++.|.. +.|.++|++..
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~----l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTT----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCC----CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 89999999999999999 578999999875432 2222222 2233556666 78999999998 89999998754
Q ss_pred eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 267 VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 267 ~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.....+. .....|||||+|+++++||++...-++|+.+.+.
T Consensus 193 ~~~~~~~-------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 193 GRRIIAD-------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SCEESCC-------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcEEEEE-------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 3221111 1234799999999999999998888889988764
No 64
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=1.4e-11 Score=110.01 Aligned_cols=190 Identities=13% Similarity=0.132 Sum_probs=132.4
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
....+|+++++|.+|+++. +...|.++|++ +++.............+++.+ ++.+|+++..++.++++|++ .+ .
T Consensus 15 ~~~~~i~~d~~g~l~v~~~--~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~ 89 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQH--KANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI-I 89 (299)
T ss_dssp CCEEEEEECTTSCEEEEET--TTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-E
T ss_pred CCccceEECCCCCEEEEec--CCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-E
Confidence 3457999999999999976 55699999999 876543321123345678875 46899999989999999986 33 3
Q ss_pred EEEecC----CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCe
Q 019103 184 EEFTHQ----MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDC 257 (346)
Q Consensus 184 ~ti~~~----~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~ 257 (346)
..+..+ .+.+..+++|| .||+++ +.+.|+++|+ +.+.. .+.....+ ..++.+.+. +|++|+..+..+.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~---~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIR-EYELPNKG---SYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEE-EEECSSTT---CCEEEEEECTTSCEEEEETTTTE
T ss_pred EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEE-EecCCCCC---CCCceEEEcCCCCEEEEeCCCCE
Confidence 444431 34444455555 688876 5789999999 66654 23322111 133456665 6899999888899
Q ss_pred EEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 258 IARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|.++|+ +|++.. +.+.. ....+++|+++++++ +||+...-..|+.+..
T Consensus 164 i~~~~~-~g~~~~-~~~~~-----------~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 164 IGRITE-SGDITE-FKIPT-----------PASGPVGITKGNDDA-LWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEEECT-TCCEEE-EECSS-----------TTCCEEEEEECTTSS-EEEEETTTTEEEEECT
T ss_pred EEEEcC-CCcEEE-eeCCC-----------CCCcceeEEECCCCC-EEEEccCCceEEEECC
Confidence 999999 888764 33311 123689999999866 8998877778887754
No 65
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=5.1e-13 Score=118.83 Aligned_cols=189 Identities=14% Similarity=0.230 Sum_probs=129.9
Q ss_pred cceeEEEecCCEEEE-EcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCCEEEEEECCCCcEE
Q 019103 106 FTQGLLYAENDTLFE-STGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 106 FTqGL~~~~d~~Lye-StGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
...+++++++|+||+ +.. +...|.++|..+++... ..........+++.+. ++||+++. ++.++++|+++...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~--~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEG--MYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECS--SSCEEEEECC-----EE-CCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-
T ss_pred CccceEECCCCCEEEEccC--CCCcEEEecCCCcccce-EeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-
Confidence 447999999999999 755 45699999988775432 2233222346677763 56999998 89999999887544
Q ss_pred EEEecC---CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeE
Q 019103 184 EEFTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCI 258 (346)
Q Consensus 184 ~ti~~~---~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I 258 (346)
..+... .|.+..+++||+ ||++| +.+.|+++|+.+.+..... .. ....++.+.+. +|++|++....+.|
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~---~~--~~~~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVLP---FT--GLNDPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEECC---CC--SCCSCCCEEECTTCCEEEEEGGGTEE
T ss_pred eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEeec---cc--cCCCceeEEEeCCCCEEEEECCCCEE
Confidence 334321 345556666665 99988 5789999998876543221 11 11234556666 68999999888999
Q ss_pred EEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 259 ARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 259 ~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.++|++++.+.... . .....|+|||+++++ ++||+...-..|+.+..
T Consensus 174 ~~~~~~~~~~~~~~-~------------~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 174 VKLEAESNNQVVLP-F------------TDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp EEECTTTCCEEECC-C------------SSCCSEEEEEECTTC-CEEEEETTTSCEEEECT
T ss_pred EEEecCCCceEeec-c------------cCCCCceEEEECCCC-CEEEEECCCCcEEEEcC
Confidence 99999988764321 1 112468999999987 89999888888888765
No 66
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.50 E-value=1.8e-11 Score=109.37 Aligned_cols=190 Identities=12% Similarity=0.106 Sum_probs=131.0
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
....+++++++|+||+++. +...|.++|+ +|++.............+++.+ ++++|++++.++.++++|+ +.+..
T Consensus 99 ~~~~~i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEM--NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp CCEEEEEECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CCceeeEECCCCCEEEEec--CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 3457999999999999875 4569999999 7776543322233456778887 4689999999999999999 66654
Q ss_pred EE-EecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeE
Q 019103 184 EE-FTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCI 258 (346)
Q Consensus 184 ~t-i~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I 258 (346)
.. ++.. .+.+..+++||+ ||+++ +++.|+++|+ +.++. .+..... ...+..+.+. +|.||+..+..+.|
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i 248 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDA-LWFVEIIGNKIGRITT-SGEIT-EFKIPTP---NARPHAITAGAGIDLWFTEWGANKI 248 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEE-EEECSST---TCCEEEEEECSTTCEEEEETTTTEE
T ss_pred EeeCCCCCCcceeEEECCCCC-EEEEccCCceEEEECC-CCcEE-EEECCCC---CCCceeEEECCCCCEEEeccCCceE
Confidence 32 2222 245555666665 88877 5889999999 77754 3433321 1123345555 68999999889999
Q ss_pred EEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 259 ARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 259 ~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.++|+ +|++. .+.++. ....+.+|++ ++ +++||+.. .+.+++++..
T Consensus 249 ~~~d~-~g~~~-~~~~~~-----------~~~~~~~i~~-~~-g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 249 GRLTS-NNIIE-EYPIQI-----------KSAEPHGICF-DG-ETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEEET-TTEEE-EEECSS-----------SSCCEEEEEE-CS-SCEEEEET-TTEEEEEEEC
T ss_pred EEECC-CCceE-EEeCCC-----------CCCccceEEe-cC-CCEEEEec-CCcEEEEEcC
Confidence 99999 67653 443311 1236899999 55 56787765 5788887653
No 67
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=6.1e-12 Score=119.01 Aligned_cols=213 Identities=8% Similarity=0.069 Sum_probs=135.8
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECC-CCcEEEEec--cCCCeeEEEEEEeCCEEEE--E
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALE-TGKVEAINQ--MEGSYFGEGLTLLGEKLFQ--V 165 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~-Tgkv~~~~~--l~~~~FgeGit~~g~~LY~--l 165 (346)
+++.+...+.....-..++++++||+ ||.++. + .|.+||++ +|++..... .+..+....++++|++||+ +
T Consensus 27 ~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~--~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~ 102 (365)
T 1jof_A 27 TCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM--K--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAA 102 (365)
T ss_dssp EEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB--T--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEEC
T ss_pred CEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc--c--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEe
Confidence 34555555533222236999999995 777654 3 89999998 898765433 2233333334445665444 4
Q ss_pred E------e------eCCEEEEEECC-CCcEEEEEec-----C-CCceeEEeeCCCEEEEEC-CCCeEEEEeCC-CCcEE-
Q 019103 166 T------W------LQKTGFIYDQN-NLNKLEEFTH-----Q-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVI- 223 (346)
Q Consensus 166 t------w------~~~~v~V~D~~-tl~~i~ti~~-----~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~-T~kvi- 223 (346)
+ + .++.+.++|.+ +++...++.. + .+.+..++|||++||++| ++++|+++|.+ +++..
T Consensus 103 ~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~ 182 (365)
T 1jof_A 103 KQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL 182 (365)
T ss_dssp SSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred cCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE
Confidence 3 2 57889999986 5666655542 2 467778999999999988 68999999987 77653
Q ss_pred -EEEEecc-CCeeeeeceeeEee-CC-EEEEEecCCCeEEEE--eCCCCeEEE---EEECCchhhhhhhccCCCCc----
Q 019103 224 -RKDIVRY-KGREVRNLNELEFI-KG-EVWANVWQTDCIARI--SHEDGVVLG---WVLLPNLRERLVAAGYNGID---- 290 (346)
Q Consensus 224 -~~I~V~~-~G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vI--D~~TG~Vv~---~I~l~~l~~~~~~~~~~~~~---- 290 (346)
..+.+.. ...|.+ +.+. || +||+.++.++.|.++ |+++|+... .+.. +.. +.....
T Consensus 183 ~~~~~~~~~g~~p~~----~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~--~~~-----~~~g~~~~~~ 251 (365)
T 1jof_A 183 VGSVDAPDPGDHPRW----VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL--IPP-----GIPDRDPETG 251 (365)
T ss_dssp EEEEECSSTTCCEEE----EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES--SCT-----TCCCBCTTTS
T ss_pred eeeEecCCCCCCCCE----eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc--CCC-----CcCCcccccc
Confidence 3344321 122432 5454 45 899999888888886 566888643 3432 110 000111
Q ss_pred ---eeeEEE-EeCCCCEEEEecCCCC-----cEEEEEE
Q 019103 291 ---VLNGIA-WDSNRNRIFVTGKLWP-----KLYEINL 319 (346)
Q Consensus 291 ---vlNGIA-~d~~~~~LfVTGK~Wp-----~l~ev~l 319 (346)
.+.+|+ ++|++++||+++...+ +|...++
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 589999 9999999999986554 5544444
No 68
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.50 E-value=8.3e-12 Score=116.44 Aligned_cols=206 Identities=10% Similarity=0.033 Sum_probs=133.0
Q ss_pred eEEEEEEec-CCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEe----cc-C----------CCeeEEEEE
Q 019103 93 IQVVNEFPH-DPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN----QM-E----------GSYFGEGLT 156 (346)
Q Consensus 93 ~~Vv~t~ph-d~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~----~l-~----------~~~FgeGit 156 (346)
++.+.+.+. ...+ .++.+ .++.||+++. +++.|.+||+++...+..+ .. + +.+.+..++
T Consensus 89 ~~~~~~~~~~~~~p--~~~~~-dg~~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 89 LHLLNTQKTMGADP--CYLTT-NGKNIVTANY--SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEEECSSSCE--EEEEE-CSSEEEEEET--TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred EEEeeEeccCCCCc--EEEEE-CCCEEEEEEC--CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 456666663 3334 68888 3346888865 6679999999764322211 11 1 111233344
Q ss_pred EeCCEEEEEEeeCCEEEEEECCCCc-------E--E---EEEec--C-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCC
Q 019103 157 LLGEKLFQVTWLQKTGFIYDQNNLN-------K--L---EEFTH--Q-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTL 220 (346)
Q Consensus 157 ~~g~~LY~ltw~~~~v~V~D~~tl~-------~--i---~ti~~--~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~ 220 (346)
++++.||+++..++.+.+||.+... + . ..+.. + .|.+..+++||++||+++ ++++|.++|.++.
T Consensus 164 pdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 164 PDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 4677899999999999999765332 1 1 22222 2 456778899999999988 6899999998877
Q ss_pred cEE--EEEEeccCCeeeeeceeeEee-CC-EEEEEecC-CCeEEEEe--CCCCe--EEEEEECCchhhhhhhccCCCCce
Q 019103 221 KVI--RKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ-TDCIARIS--HEDGV--VLGWVLLPNLRERLVAAGYNGIDV 291 (346)
Q Consensus 221 kvi--~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~-sn~I~vID--~~TG~--Vv~~I~l~~l~~~~~~~~~~~~~v 291 (346)
+.. .++.....+ ....+.+.+. || +||+.+.. .+.|.+.| +++|+ .+..+.. +..
T Consensus 244 ~~~~~~~~~~~~~~--~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--------------g~~ 307 (361)
T 3scy_A 244 MLDEIQTVAADTVN--AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--------------GIH 307 (361)
T ss_dssp EEEEEEEEESCSSC--CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--------------SSC
T ss_pred ceEEeEEEecCCCC--CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--------------CCC
Confidence 653 333332211 1122345554 44 79999887 78888855 46777 4444432 225
Q ss_pred eeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 292 LNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 292 lNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|.++||+|+++.||+++..-+.+...++
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 6899999999999999987776655444
No 69
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=9.6e-12 Score=113.36 Aligned_cols=188 Identities=17% Similarity=0.234 Sum_probs=130.8
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCe--eEEEEEEe-CCEEEEEEe--------------
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSY--FGEGLTLL-GEKLFQVTW-------------- 167 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~--FgeGit~~-g~~LY~ltw-------------- 167 (346)
...||+++++|+||+++. +...|.+||+++|++...... .... +..+++.+ .+++|+++.
T Consensus 70 ~~~~l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSH--GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp SEEEEEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CcceeeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 347999999999999976 567999999999987554322 1111 12345564 357999753
Q ss_pred ---eCCEEEEEECCCCcEEEEEec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeCC-CCcE-EEEEEec-cCCeeeeece
Q 019103 168 ---LQKTGFIYDQNNLNKLEEFTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKV-IRKDIVR-YKGREVRNLN 239 (346)
Q Consensus 168 ---~~~~v~V~D~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~-T~kv-i~~I~V~-~~G~pv~~lN 239 (346)
..+.++.+|++ .+....... ..|.|..+++||+.| ++| +.+.|+++|.. ++++ ...-... ..+.| +
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p----~ 221 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKT----D 221 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCC----C
T ss_pred ccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCC----C
Confidence 14689999987 443322222 246888899999999 777 58899999976 5665 2211221 12233 2
Q ss_pred eeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEE-eCCCCEEEEecCCCCcEEEE
Q 019103 240 ELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAW-DSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 240 ELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~-d~~~~~LfVTGK~Wp~l~ev 317 (346)
-+.+. +|+||++. .+.|.++|++ |+++..+.++ .. ++.++| .|++++||||.. ..||++
T Consensus 222 ~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~------------~~--~~~~~f~~~d~~~L~v~t~--~~l~~~ 282 (296)
T 3e5z_A 222 GLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTP------------QT--TSNLCFGGPEGRTLYMTVS--TEFWSI 282 (296)
T ss_dssp SEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECS------------SC--CCEEEEESTTSCEEEEEET--TEEEEE
T ss_pred eEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECC------------CC--ceeEEEECCCCCEEEEEcC--CeEEEE
Confidence 35554 78999988 7899999997 8888888652 12 677999 589999999975 589988
Q ss_pred EEe
Q 019103 318 NLR 320 (346)
Q Consensus 318 ~l~ 320 (346)
++.
T Consensus 283 ~~~ 285 (296)
T 3e5z_A 283 ETN 285 (296)
T ss_dssp ECS
T ss_pred Ecc
Confidence 774
No 70
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.49 E-value=9.5e-13 Score=133.11 Aligned_cols=179 Identities=11% Similarity=0.065 Sum_probs=138.9
Q ss_pred CCCCCCeEEEEECCC-----CcEEEEeccCC-----CeeE---------EEEE--EeCCEEEEEEeeCCEEEEEECCCC-
Q 019103 123 GLYGRSSVRRVALET-----GKVEAINQMEG-----SYFG---------EGLT--LLGEKLFQVTWLQKTGFIYDQNNL- 180 (346)
Q Consensus 123 Glyg~s~V~~iDl~T-----gkv~~~~~l~~-----~~Fg---------eGit--~~g~~LY~ltw~~~~v~V~D~~tl- 180 (346)
+.++...|.+||++. |||+.+++++. +.|| .-.+ .++++||+..-.+++|+|||.++.
T Consensus 38 ~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p 117 (462)
T 2ece_A 38 GINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNP 117 (462)
T ss_dssp TCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCT
T ss_pred CCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCC
Confidence 335678999999998 99999999875 1222 1114 668899999999999999998877
Q ss_pred ---cEEEEEe-------cC--CCceeEEeeCCCEEEEEC-CC------CeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 181 ---NKLEEFT-------HQ--MKDGWGLATDGKVLFGSD-GS------SMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 181 ---~~i~ti~-------~~--~peGwGLt~Dg~~LyvSd-Gs------~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
+++++|+ ++ .|.+...++|| +|||. |+ +.|.++|++|++++++++++.....+.+ .+
T Consensus 118 ~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y--d~ 193 (462)
T 2ece_A 118 REPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY--DF 193 (462)
T ss_dssp TSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC--CE
T ss_pred CCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc--eE
Confidence 8999993 23 46677788999 88865 54 7999999999999999998753222221 12
Q ss_pred Ee--eCCEEEEEecC------------------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEE--eC
Q 019103 242 EF--IKGEVWANVWQ------------------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAW--DS 299 (346)
Q Consensus 242 E~--~~G~LyaNv~~------------------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~--d~ 299 (346)
-| ..+.+|++.|. .++|.++|.++++++.+|+++. .+..|.+|++ +|
T Consensus 194 ~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-----------~g~~P~~i~f~~~P 262 (462)
T 2ece_A 194 WWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE-----------ENRMALELRPLHDP 262 (462)
T ss_dssp EEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT-----------TEEEEEEEEECSST
T ss_pred EECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC-----------CCCccceeEeeECC
Confidence 12 24578889874 8999999999999999998831 1236778877 99
Q ss_pred CCCEEEEecC-----CCCcEEE
Q 019103 300 NRNRIFVTGK-----LWPKLYE 316 (346)
Q Consensus 300 ~~~~LfVTGK-----~Wp~l~e 316 (346)
+++.+||++. +..+|+.
T Consensus 263 dg~~aYV~~e~~~~~Lss~V~v 284 (462)
T 2ece_A 263 TKLMGFINMVVSLKDLSSSIWL 284 (462)
T ss_dssp TCCEEEEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEeeeccCCCceEEE
Confidence 9999999999 8888874
No 71
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.48 E-value=2.3e-11 Score=114.76 Aligned_cols=197 Identities=11% Similarity=0.077 Sum_probs=133.6
Q ss_pred EecCCCCcceeEEEec-CCEEEEEcCCCCCCeEEEEECCC---CcE-EEEeccCCCeeEEEEEEe--CCEEEEEEeeCCE
Q 019103 99 FPHDPRAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALET---GKV-EAINQMEGSYFGEGLTLL--GEKLFQVTWLQKT 171 (346)
Q Consensus 99 ~phd~~~FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~T---gkv-~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~ 171 (346)
++....+ .|+++++ +++||++.. +..+|.++|+++ ++. ...+.- .-...+|++++ ++.||+++...+.
T Consensus 26 ~~~~~~p--~g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~~d~~~~~ 100 (316)
T 1ijq_A 26 IPNLRNV--VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGT 100 (316)
T ss_dssp ECSCSSE--EEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred hcCCCce--EEEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeC-CCCCcCEEEEeecCCeEEEEECCCCE
Confidence 4444445 7999996 468999976 567999999987 222 222221 11234678875 6899999999999
Q ss_pred EEEEECCCCcEEEEEec--CCCceeEEeeCCCEEEEEC-CC-CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--C
Q 019103 172 GFIYDQNNLNKLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--K 245 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~--~~peGwGLt~Dg~~LyvSd-Gs-~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~ 245 (346)
+.++|.+......-+.. ..|.|.++++++++||++| +. ..|+.+|+.. +....+ +.. .+..+|.|.+. +
T Consensus 101 I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~-~~~---~~~~P~gla~d~~~ 175 (316)
T 1ijq_A 101 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL-VTE---NIQWPNGITLDLLS 175 (316)
T ss_dssp EEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE-ECS---SCSCEEEEEEETTT
T ss_pred EEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEE-EEC---CCCCceEEEEeccC
Confidence 99999875433333332 3578888888999999999 54 7999999853 333222 211 23345667776 6
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
++||++.+..+.|.++|.+.......+... .....|.|||++ ++++|+|...-.+|+.+.
T Consensus 176 ~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~-----------~~~~~P~giav~--~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 176 GRLYWVDSKLHSISSIDVNGGNRKTILEDE-----------KRLAHPFSLAVF--EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEECT-----------TTTSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCeEEEEecCCCceEEEeecC-----------CccCCcEEEEEE--CCEEEEEECCCCeEEEEe
Confidence 899999999999999999754332222221 112368999997 479999987667888775
No 72
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.48 E-value=4e-12 Score=126.29 Aligned_cols=208 Identities=14% Similarity=0.111 Sum_probs=139.6
Q ss_pred ceeEEEecC---CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe---------------------------------
Q 019103 107 TQGLLYAEN---DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY--------------------------------- 150 (346)
Q Consensus 107 TqGL~~~~d---~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~--------------------------------- 150 (346)
.+||+++++ +.||++.. + ..|++||+++|++.....-...+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~--~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQ--R-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECB--T-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEeC--C-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 469999974 79999976 3 79999999988875443211111
Q ss_pred -----------eEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEE-ecC---CCceeEEeeCCCEEEEEC-CCCeE
Q 019103 151 -----------FGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEF-THQ---MKDGWGLATDGKVLFGSD-GSSML 212 (346)
Q Consensus 151 -----------FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti-~~~---~peGwGLt~Dg~~LyvSd-Gs~~l 212 (346)
...|++++ ++.||++++.++.+++||+++++...++ ..+ .+.|.++++||++||++| +.++|
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 12334444 4678999988999999999888774443 332 234578889999999999 58899
Q ss_pred EEEeCC--CCcEEE-EEEecc---CCe--------eeeeceeeEe---------e-CCEEEEEecCCCeEEEEeCCCCeE
Q 019103 213 YQIDPQ--TLKVIR-KDIVRY---KGR--------EVRNLNELEF---------I-KGEVWANVWQTDCIARISHEDGVV 268 (346)
Q Consensus 213 ~vIDp~--T~kvi~-~I~V~~---~G~--------pv~~lNELE~---------~-~G~LyaNv~~sn~I~vID~~TG~V 268 (346)
+.+|.. +.+... .+.++. .|. .+..++.+.+ . +|.||++.+..++|.+||+ +|++
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 998854 433211 122222 111 1233445766 3 5789999999999999997 7876
Q ss_pred EEEEECCc-----hhhh-hhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 269 LGWVLLPN-----LRER-LVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 269 v~~I~l~~-----l~~~-~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
....-... .... +.. ......|.|||++|..+.|||+...-.+|.+|.+.
T Consensus 377 ~t~~G~g~~~~~G~~dG~~~~--~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 TTYAGRGNSREWGYVDGELRS--QALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECCCTTCSSCCBCEETTT--TCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCccccCCCcccc--ccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 55442211 0000 000 11245699999998889999999988999998764
No 73
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.48 E-value=3.7e-12 Score=118.70 Aligned_cols=192 Identities=11% Similarity=0.089 Sum_probs=135.1
Q ss_pred eeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEec-cCC--CeeEEEEEEeC--CEEEEEEee-------------
Q 019103 108 QGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQ-MEG--SYFGEGLTLLG--EKLFQVTWL------------- 168 (346)
Q Consensus 108 qGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~-l~~--~~FgeGit~~g--~~LY~ltw~------------- 168 (346)
.||++++ +|+||++.. + ..|.++|++++++..... .+. -.+..+++.+. ++||++++.
T Consensus 83 ~gi~~~~~~g~l~v~d~--~-~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDC--Y-YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EEEEEETTTTEEEEEET--T-TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred ceEEEcCCCCcEEEEEC--C-CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 6999996 789999965 2 359999999875432221 121 13467788864 689999865
Q ss_pred ----CCEEEEEECCCCcEEEEEec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcE--EEEEEeccCCeeeeecee
Q 019103 169 ----QKTGFIYDQNNLNKLEEFTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKV--IRKDIVRYKGREVRNLNE 240 (346)
Q Consensus 169 ----~~~v~V~D~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kv--i~~I~V~~~G~pv~~lNE 240 (346)
.+.++++|+++.+....... ..|.|.++++||++||++| +.+.|+++|..+.+. ...+. ...| |- -
T Consensus 160 ~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~----g 233 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PG----N 233 (322)
T ss_dssp HTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EE----E
T ss_pred ccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CC----C
Confidence 36899999988765433322 3579999999999999998 578999999875321 11111 1223 43 3
Q ss_pred eEee-CCEEEEEecC----------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 241 LEFI-KGEVWANVWQ----------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 241 LE~~-~G~LyaNv~~----------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+..+ +|.||++.+. .+.|.++|++ |+++..+..++-. ....+.+++.. +++||||+-
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~---------~~~~~~~~~~~--~g~L~v~~~ 301 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF---------AGEHFEQIQEH--DGLLYIGTL 301 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT---------TTSCCCEEEEE--TTEEEEECS
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC---------ccccceEEEEe--CCEEEEeec
Confidence 5444 6899999987 5789999995 9999999763210 02346777774 579999998
Q ss_pred CCCcEEEEEEe
Q 019103 310 LWPKLYEINLR 320 (346)
Q Consensus 310 ~Wp~l~ev~l~ 320 (346)
.-+.|..+++.
T Consensus 302 ~~~~i~~~~~~ 312 (322)
T 2fp8_A 302 FHGSVGILVYD 312 (322)
T ss_dssp SCSEEEEEEC-
T ss_pred CCCceEEEecc
Confidence 88999999875
No 74
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=1.2e-11 Score=116.28 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=132.3
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC---CeeEEEEEEe-CCEEEEEEee------CCEEEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG---SYFGEGLTLL-GEKLFQVTWL------QKTGFIYD 176 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~---~~FgeGit~~-g~~LY~ltw~------~~~v~V~D 176 (346)
..++.++++|++|+++. ..|.++|+++|++......+. .....++..+ .+++|+.+.. .+.++.+|
T Consensus 92 v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 92 GSALAKISDSKQLIASD----DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp EEEEEEEETTEEEEEET----TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred ceEEEEeCCCeEEEEEC----CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 47899999999999874 369999999999765444321 1233455554 3569998874 36899999
Q ss_pred CCCCcEEEEEec-CCCceeEEeeCCCEEEEEC-CCCeEEEEeCC--CC-cEE--EEE-Eec-cCCeeeeeceeeEee-CC
Q 019103 177 QNNLNKLEEFTH-QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ--TL-KVI--RKD-IVR-YKGREVRNLNELEFI-KG 246 (346)
Q Consensus 177 ~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~--T~-kvi--~~I-~V~-~~G~pv~~lNELE~~-~G 246 (346)
+++...-... ..+.|..+++||+.||++| ..+.|+++|.. ++ ++. +.+ ... ..+.| +.+..+ +|
T Consensus 168 --~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p----~gi~~d~~G 241 (326)
T 2ghs_A 168 --KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGM----DGSVCDAEG 241 (326)
T ss_dssp --TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEE----EEEEECTTS
T ss_pred --CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCC----CeeEECCCC
Confidence 4543322221 2467888899999999988 47899999975 65 432 111 121 12333 335454 68
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEe-CCCCEEEEecCCC-------------C
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWD-SNRNRIFVTGKLW-------------P 312 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d-~~~~~LfVTGK~W-------------p 312 (346)
.||++.|..+.|.++|+ +|+++..+.++. ..+.++||+ +++++||||.-.- +
T Consensus 242 ~lwva~~~~~~v~~~d~-~g~~~~~i~~~~-------------~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g 307 (326)
T 2ghs_A 242 HIWNARWGEGAVDRYDT-DGNHIARYEVPG-------------KQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHG 307 (326)
T ss_dssp CEEEEEETTTEEEEECT-TCCEEEEEECSC-------------SBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTT
T ss_pred CEEEEEeCCCEEEEECC-CCCEEEEEECCC-------------CCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCc
Confidence 99999998899999999 788888886521 257899999 8999999986443 4
Q ss_pred cEEEEEE
Q 019103 313 KLYEINL 319 (346)
Q Consensus 313 ~l~ev~l 319 (346)
.+|++++
T Consensus 308 ~~~~~~~ 314 (326)
T 2ghs_A 308 LTFELGI 314 (326)
T ss_dssp CEEECSS
T ss_pred eEEEEeC
Confidence 6888874
No 75
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=5e-12 Score=119.47 Aligned_cols=216 Identities=14% Similarity=0.085 Sum_probs=143.0
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCC--CeEEEEECCCCcEEEEecc-----CCCeeEEEEEEeC-CEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR--SSVRRVALETGKVEAINQM-----EGSYFGEGLTLLG-EKLF 163 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~--s~V~~iDl~Tgkv~~~~~l-----~~~~FgeGit~~g-~~LY 163 (346)
.++++.++. .+..|++++++|++|++...++. .+|..+| +|++..-... ..-....|++++. ++||
T Consensus 8 ~~~~v~~~~----~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~ 81 (343)
T 2qe8_A 8 RLEVVAELS----LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVW 81 (343)
T ss_dssp CCEEEEEES----SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEE
T ss_pred eeEEEEEcC----CCcceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEE
Confidence 578888877 34479999999999999654332 4888888 7875411100 1123467788875 7899
Q ss_pred EEEee-----CCEEEEEECCCCcEEEEEecC--------CCceeEEeeCCCEEEEECC----CCeEEEEeCCCCcEEEEE
Q 019103 164 QVTWL-----QKTGFIYDQNNLNKLEEFTHQ--------MKDGWGLATDGKVLFGSDG----SSMLYQIDPQTLKVIRKD 226 (346)
Q Consensus 164 ~ltw~-----~~~v~V~D~~tl~~i~ti~~~--------~peGwGLt~Dg~~LyvSdG----s~~l~vIDp~T~kvi~~I 226 (346)
+++.. .+++++||+++.++++++..+ .+.+..++++++.+|++|. ++.|+++|+++.+..+.+
T Consensus 82 v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 82 MLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred EEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 99976 689999999999999988752 2366778888889999984 679999999998876654
Q ss_pred Ee-----------ccCCeee-------------eeceeeEee-CC-EEEEEecCCCeEEEEeCCCCeEEEEEECCch--h
Q 019103 227 IV-----------RYKGREV-------------RNLNELEFI-KG-EVWANVWQTDCIARISHEDGVVLGWVLLPNL--R 278 (346)
Q Consensus 227 ~V-----------~~~G~pv-------------~~lNELE~~-~G-~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l--~ 278 (346)
.- ..+|+.+ ...|.|.+. +| .||++....+.|.+||++..+- .. +++- .
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~-~~--~~~~~~~ 238 (343)
T 2qe8_A 162 QGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSN-LQ--LTDAELG 238 (343)
T ss_dssp TTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTC-TT--CCHHHHH
T ss_pred cCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcC-CC--CChhhhh
Confidence 21 0123322 124556555 44 7999988888999998642110 00 0000 0
Q ss_pred hhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 279 ERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 279 ~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
..+...+ ....|+|||+|+++ ++||+.-.-..|+.+..
T Consensus 239 ~~~~~~g--~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 239 SKIERYS--EKPICDGISIDKDH-NIYVGDLAHSAIGVITS 276 (343)
T ss_dssp TTCEEEE--ECCSCSCEEECTTC-CEEEEEGGGTEEEEEET
T ss_pred cceEecc--cCCCCceEEECCCC-CEEEEccCCCeEEEEEC
Confidence 0000000 01268999999985 79999766677777654
No 76
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=5.5e-11 Score=106.20 Aligned_cols=199 Identities=12% Similarity=0.108 Sum_probs=138.6
Q ss_pred EEEEEecC-CCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeC-CEEEEEEeeCCE
Q 019103 95 VVNEFPHD-PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLG-EKLFQVTWLQKT 171 (346)
Q Consensus 95 Vv~t~phd-~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g-~~LY~ltw~~~~ 171 (346)
.+++++.. ......+++++++|.||+++. +...|.++|++ +++.. +.++. .....+++.+. +.+|+++..++.
T Consensus 9 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~--~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 84 (300)
T 2qc5_A 9 YLEEFNLSIPDSGPYGITSSEDGKVWFTQH--KANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANK 84 (300)
T ss_dssp EEEEEECSSTTCCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred eEEEEecCCCCCCcceeeECCCCCEEEEcC--CCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCe
Confidence 34555542 233457999999999999986 55799999999 87764 44432 24467788864 679999988999
Q ss_pred EEEEECCCCcEEEEEecC----CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C
Q 019103 172 GFIYDQNNLNKLEEFTHQ----MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~----~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~ 245 (346)
++++|++ .+. .++..+ .+.+..++++| .||+++ +.+.|+.+|++ .++. .+..... ...++.+.+. +
T Consensus 85 v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~---~~~~~~i~~d~~ 156 (300)
T 2qc5_A 85 IGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIY-EYDLPNK---GSYPAFITLGSD 156 (300)
T ss_dssp EEEECTT-SCE-EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEE-EEECSST---TCCEEEEEECTT
T ss_pred EEEECCC-CCe-EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEE-EccCCCC---CCCceeEEECCC
Confidence 9999988 554 445432 24444555555 578877 57899999998 6654 3333221 1123446554 6
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|+||++....+.|.++|+ +|++.. +.+.. ....++||++++++ ++||+...-..|+.+..
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~-----------~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEE-YPLPT-----------NAAAPVGITSGNDG-ALWFVEIMGNKIGRITT 216 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEE-EECSS-----------TTCCEEEEEECTTS-SEEEEETTTTEEEEECT
T ss_pred CCEEEEecCCCeEEEECC-CCcEEE-eeCCC-----------CCCCcceEEECCCC-CEEEEccCCCEEEEEcC
Confidence 789999988899999999 888764 43311 12468999999976 68999877778887754
No 77
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.45 E-value=2.3e-11 Score=118.43 Aligned_cols=189 Identities=11% Similarity=0.004 Sum_probs=135.6
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 107 TQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 107 TqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
..|+++++ +++||++.- ...+|.++|++++.+...+..+ ....+|++++ ++.||.+++..+.+.++|.+.....
T Consensus 118 ~~gl~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp EEEEEEETTTTEEEEEET--TTTEEEEEETTSCCEEEEECSS-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred cEEEEEecCCCeEEEEeC--CCCcEEEEecCCCCcEEEEeCC-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 47999995 568999976 5679999999988755444322 1124667776 7899999999999999998754433
Q ss_pred EEEec--CCCceeEEeeCCCEEEEEC-CC-CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCe
Q 019103 184 EEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDC 257 (346)
Q Consensus 184 ~ti~~--~~peGwGLt~Dg~~LyvSd-Gs-~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~ 257 (346)
..+.. ..|.|.++++++++||++| +. ..|+.+|+...... .+ +.. .+..+|.|.+. +++||++.+..+.
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~-~~~---~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II-ADT---HLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE-ECS---SCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EE-EEC---CCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 33332 2578888899999999999 55 89999998754332 22 211 12344667665 7899999999999
Q ss_pred EEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 258 IARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
|.++|.+.......+.. + ...|.|||++ ++.+|+|...-..|+++.
T Consensus 270 I~~~d~dG~~~~~~~~~-~------------~~~P~giav~--~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 270 IERANLDGSHRKAVISQ-G------------LPHPFAITVF--EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEECTTSCSCEEEECS-S------------CSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCeeEEEEEC-C------------CCCceEEEEE--CCEEEEeeCCCCeEEEEE
Confidence 99999875433222321 1 2368999995 569999987778888875
No 78
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.44 E-value=2.6e-11 Score=116.41 Aligned_cols=189 Identities=12% Similarity=0.017 Sum_probs=135.1
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 107 TQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 107 TqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
..||++++ ++.||.+.- ...+|.+++++++.+...+..+ -...+|++++ ++.||.+++..+.+.++|.+.....
T Consensus 75 ~~~l~~d~~~~~ly~~D~--~~~~I~r~~~~g~~~~~~~~~~-~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDV--TLDRILRANLNGSNVEEVVSTG-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp EEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSS-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEEEeccccEEEEEec--cCCceEEEecCCCCceEEEeCC-CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 37999994 568999975 5569999999987654443322 1224677776 7899999999999999998754333
Q ss_pred EEEec--CCCceeEEeeCCCEEEEEC-CC-CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCe
Q 019103 184 EEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDC 257 (346)
Q Consensus 184 ~ti~~--~~peGwGLt~Dg~~LyvSd-Gs-~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~ 257 (346)
.-+.. ..|.|.+++++++.||++| +. ..|+.+|+...... . .+.. .+..+|.|.+. +++||++.+..+.
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~-~~~~---~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-I-IADT---HLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E-SCCS---SCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-E-EEEC---CCCCcceEEEeCCCCEEEEEECCCCE
Confidence 22322 2578888999999999999 55 89999998653321 1 1221 23345667665 7899999999999
Q ss_pred EEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 258 IARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
|.++|++.......+.. + ...|+|||++ ++++|+|.-.-..|+.+.
T Consensus 227 I~~~~~dG~~~~~~~~~-~------------~~~P~giav~--~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 227 IERANLDGSHRKAVISQ-G------------LPHPFAITVF--EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEEETTSCSCEEEECS-S------------CSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCceEEEEeC-C------------CCCceEEEEE--CCEEEEecCCCCeEEEEE
Confidence 99999875433222321 1 2368999995 569999987778888875
No 79
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.43 E-value=2.8e-11 Score=118.58 Aligned_cols=180 Identities=14% Similarity=0.116 Sum_probs=128.7
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCC----cEEEEEec--
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNL----NKLEEFTH-- 188 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl----~~i~ti~~-- 188 (346)
.|+.++. ..|+++|+++.+....+.-...+ .|++.+ +++||.++..+++|+.+|.+.. .....+..
T Consensus 85 ~ll~~~~----~~I~~i~l~~~~~~~~~~~~~~~--~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 85 YLFFTNR----HEVRKMTLDRSEYTSLIPNLRNV--VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEEEET----TEEEEECTTSCSCEEEECSCSCE--EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred eeEEecc----ceeEEEccCCcceeEeccccCcc--eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 5777755 59999999988766655444444 556665 6899999999999999998752 22222322
Q ss_pred CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCC
Q 019103 189 QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHE 264 (346)
Q Consensus 189 ~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~ 264 (346)
..|+|.++.+.++.||++| +.+.|.++|++.......+.. ....| +.|..+ +|+||++.|.. +.|.++|++
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~~~~P----~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKP----RAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-SSCCE----EEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-CCCCc----ceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 2578888888899999999 588999999986554333322 21234 445554 78999999975 789999987
Q ss_pred CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 265 DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.......+.- + ...|||||+|+++++||++...-.+|+.+.+.
T Consensus 234 G~~~~~~~~~-~------------l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 234 GVDIYSLVTE-N------------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp SCSCEEEECS-S------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCccEEEEEC-C------------CCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 5444333321 1 24789999999999999998888899988764
No 80
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=6.7e-11 Score=115.94 Aligned_cols=201 Identities=11% Similarity=0.047 Sum_probs=136.4
Q ss_pred EEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEe----c-cCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCc
Q 019103 110 LLYAEND-TLFESTGLYGRSSVRRVALETGKVEAIN----Q-MEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 110 L~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~----~-l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
+++++++ .||.+... +...|.++|..++.....+ . ....+ .+++++ +++||++++ ++.++++|.++..
T Consensus 176 ia~~~~g~~l~~~d~~-~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p--~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWE-GTHTVYVYMKASGWAPTRIGQLGSTFSGKI--GAVALDETEEWLYFVDS-NKNFGRFNVKTQE 251 (409)
T ss_dssp CEECTTSSEEEEEBSS-TTCEEEEEEGGGTTCEEEEEECCTTSCSCC--CBCEECTTSSEEEEECT-TCEEEEEETTTCC
T ss_pred eeEecCCCcEEEEecC-CCceEEEEEcCCCceeEEeeeccchhcCCc--EEEEEeCCCCeEEEEEC-CCcEEEEECCCCC
Confidence 8999887 58877652 3349999999988654444 2 22334 445554 689999654 8899999998775
Q ss_pred EEEEE----ec---C-CCc-eeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccC---Ce--------eeeecee
Q 019103 182 KLEEF----TH---Q-MKD-GWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYK---GR--------EVRNLNE 240 (346)
Q Consensus 182 ~i~ti----~~---~-~pe-GwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~---G~--------pv~~lNE 240 (346)
. ..+ .. + .|. |..++++++.||++| +.++|+.+|+... +. ..++.. |. .+..++.
T Consensus 252 ~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~--~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 252 V-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CE--WFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp E-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE--EEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred E-EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EE--EEEeCCCCCCcCCCcccccEeCCCeE
Confidence 3 233 11 1 134 788888889999999 5889999998653 22 222221 10 1334556
Q ss_pred eEee-CCEEEEEec-CCCeEEEEeCCCCeEEEEEECCchhhhh-hhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 241 LEFI-KGEVWANVW-QTDCIARISHEDGVVLGWVLLPNLRERL-VAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 241 LE~~-~G~LyaNv~-~sn~I~vID~~TG~Vv~~I~l~~l~~~~-~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
+.+. +|.||++.+ ..++|.++|+.+|++....-.....+.. ..........|+|||++++ +.|||+...-.+|.+|
T Consensus 328 ia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 328 MTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEE
T ss_pred EEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEE
Confidence 7666 688999998 9999999999899976555331110000 0000012457999999999 7999999999999998
Q ss_pred EE
Q 019103 318 NL 319 (346)
Q Consensus 318 ~l 319 (346)
.+
T Consensus 407 ~~ 408 (409)
T 3hrp_A 407 AV 408 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 81
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=2.5e-11 Score=120.19 Aligned_cols=207 Identities=13% Similarity=0.131 Sum_probs=135.1
Q ss_pred ceeEEEecCCE-EEEEcCCCC--CCeEEEEECCCCcEE--EEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCC
Q 019103 107 TQGLLYAENDT-LFESTGLYG--RSSVRRVALETGKVE--AINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 107 TqGL~~~~d~~-LyeStGlyg--~s~V~~iDl~Tgkv~--~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~t 179 (346)
..||+++++|. ||++....+ ...+..++.+.+ .. ..+.-...+ .|++++ ++.||+++|.++++++||+++
T Consensus 181 P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~-~~~~~~l~~~~~p--~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQNNNDRPNNYILTRESG-FKVITELTKGQNC--NGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp EEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT-SCSEEEEEECSSC--CCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred cceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc-eeeeeeeccCCCc--eEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 47999999885 999975222 225666665432 22 222212233 556665 588999999999999999987
Q ss_pred CcEEEEEecC---CCceeEEeeCCCEEEEEC-CCCeEEEEeCCC--CcE--EEEEEecc---CCe--------eeeece-
Q 019103 180 LNKLEEFTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDPQT--LKV--IRKDIVRY---KGR--------EVRNLN- 239 (346)
Q Consensus 180 l~~i~ti~~~---~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T--~kv--i~~I~V~~---~G~--------pv~~lN- 239 (346)
.+....+..+ .|.|.++++||++||++| +.++|+++|... .+. +..+ .+. .|. .+..++
T Consensus 258 ~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~-ag~~g~~g~~dg~~~~a~~~~P~~ 336 (430)
T 3tc9_A 258 QETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIV-CGQQGAKDWVDGVGKKARMHAPRQ 336 (430)
T ss_dssp TEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEE-EECTTCBCCBCEEGGGCBBSSEEE
T ss_pred CcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEE-eccCCCCCCCCCCCcceEeCCCcc
Confidence 7653333332 478889999999999999 588999988653 222 1122 221 111 122223
Q ss_pred eeEee---------CCEEEEEecCCCeEEEEeCCCCeEEEEEECCc--hhh---h-hhhccCCCCceeeEEEEeCCCCEE
Q 019103 240 ELEFI---------KGEVWANVWQTDCIARISHEDGVVLGWVLLPN--LRE---R-LVAAGYNGIDVLNGIAWDSNRNRI 304 (346)
Q Consensus 240 ELE~~---------~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~--l~~---~-~~~~~~~~~~vlNGIA~d~~~~~L 304 (346)
-+... +|.||++.+..++|.+||+ +|++....-... ..+ . .. .....+.|.|||++++++.|
T Consensus 337 gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~--~~~~~~~P~giavd~~~g~l 413 (430)
T 3tc9_A 337 GTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLR--QEARFNHPEGIVYDEERECF 413 (430)
T ss_dssp EEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETT--TTCBCSSEEEEEEETTTTEE
T ss_pred eEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCch--hhcEeCCCcEEEEECCCCEE
Confidence 23221 3799999999999999995 688766553310 000 0 00 00123579999999988999
Q ss_pred EEecCCCCcEEEEEEe
Q 019103 305 FVTGKLWPKLYEINLR 320 (346)
Q Consensus 305 fVTGK~Wp~l~ev~l~ 320 (346)
||+...-.+|.+|.+.
T Consensus 414 yVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 414 FIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEGGGTEEEEEEEC
T ss_pred EEEECCCCeEEEEccC
Confidence 9999999999998764
No 82
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=3.8e-11 Score=111.01 Aligned_cols=190 Identities=16% Similarity=0.266 Sum_probs=130.3
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEec-cCCCe--eEEEEEEe-CCEEEEEEe------------
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ-MEGSY--FGEGLTLL-GEKLFQVTW------------ 167 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~-l~~~~--FgeGit~~-g~~LY~ltw------------ 167 (346)
..+..|++++++|+||+++. +...|.++|.+ |++..... ..... ....++.+ .+++|+++-
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp CSCEEEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCC
T ss_pred CCccceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccc
Confidence 34457999999999999875 55699999997 77543332 12111 12345554 467998641
Q ss_pred -----eCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCC------CeEEEEeCCCCcEEE-EEEec-cCCee
Q 019103 168 -----LQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGS------SMLYQIDPQTLKVIR-KDIVR-YKGRE 234 (346)
Q Consensus 168 -----~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs------~~l~vIDp~T~kvi~-~I~V~-~~G~p 234 (346)
..+.++.+|+++++...-.....|.|..+++||+.||++|.. +.|+++|..+..+.. ++... ..|.|
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP 241 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC
T ss_pred cccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC
Confidence 136799999976654432233357889999999999999853 799999987654221 11111 12223
Q ss_pred eeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCc
Q 019103 235 VRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPK 313 (346)
Q Consensus 235 v~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~ 313 (346)
+.+..+ +|.||++.+ +.|.++|+ +|+.+..+.++. .+..++|++++++||||.. ..
T Consensus 242 ----dgi~~d~~G~lwv~~~--~gv~~~~~-~g~~~~~~~~~~--------------~~~~~~f~~d~~~L~it~~--~~ 298 (305)
T 3dr2_A 242 ----DGFCVDRGGWLWSSSG--TGVCVFDS-DGQLLGHIPTPG--------------TASNCTFDQAQQRLFITGG--PC 298 (305)
T ss_dssp ----CSEEECTTSCEEECCS--SEEEEECT-TSCEEEEEECSS--------------CCCEEEECTTSCEEEEEET--TE
T ss_pred ----CeEEECCCCCEEEecC--CcEEEECC-CCCEEEEEECCC--------------ceeEEEEeCCCCEEEEEcC--Ce
Confidence 235444 688999873 56999999 688999997622 2577999999999999965 58
Q ss_pred EEEEEE
Q 019103 314 LYEINL 319 (346)
Q Consensus 314 l~ev~l 319 (346)
||.+++
T Consensus 299 l~~~~~ 304 (305)
T 3dr2_A 299 LWMLPL 304 (305)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 998875
No 83
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.40 E-value=2.9e-10 Score=105.53 Aligned_cols=206 Identities=11% Similarity=0.062 Sum_probs=145.8
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEee-CC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWL-QK 170 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~-~~ 170 (346)
=+++-+++.....-...+.+++||++|++. ...|..+|+ +|+++-++..+......++... +++++++... ++
T Consensus 25 G~~~w~~~~~~~~~~~~~~~~pdG~ilvs~----~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 25 KEIVWEYPLEKGWECNSVAATKAGEILFSY----SKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp TEEEEEEECCTTCCCCEEEECTTSCEEEEC----BSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CeEEEEeCCCccCCCcCeEECCCCCEEEeC----CCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence 456677775432223688999999988853 358999999 8999999988643222333442 4556666655 78
Q ss_pred EEEEEECCCCcEEEEEecC--------CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeE
Q 019103 171 TGFIYDQNNLNKLEEFTHQ--------MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~--------~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE 242 (346)
+++.+|+ +++++.+++.. .+.+....+||+.+++..+++.|+.+|++ ++++-+..... .|.. -..
T Consensus 100 ~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~--~~~~---~~~ 172 (276)
T 3no2_A 100 TILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG--TPFS---SAF 172 (276)
T ss_dssp EEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS--CCCE---EEE
T ss_pred EEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC--Cccc---eeE
Confidence 9999997 89999998753 12344567889887766678899999998 99988887753 3432 112
Q ss_pred eeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe--cC-------CCCc
Q 019103 243 FIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT--GK-------LWPK 313 (346)
Q Consensus 243 ~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT--GK-------~Wp~ 313 (346)
..+|.+++.....+.|..+|++||+++-++.-.++.+ .....+.|++..++++.+... |. +.+.
T Consensus 173 ~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~-------~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~ 245 (276)
T 3no2_A 173 LDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG-------VQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQ 245 (276)
T ss_dssp CTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBS-------CCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCS
T ss_pred cCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCC-------ccccccccceEcCCCCEEEEeccCccccccccCCce
Confidence 3478888888778899999999999999886422211 013468999999987655444 32 5778
Q ss_pred EEEE
Q 019103 314 LYEI 317 (346)
Q Consensus 314 l~ev 317 (346)
+|||
T Consensus 246 ~~~~ 249 (276)
T 3no2_A 246 LVEI 249 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9987
No 84
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.40 E-value=2.8e-11 Score=115.43 Aligned_cols=182 Identities=13% Similarity=0.093 Sum_probs=128.2
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEE-EEe--cCCC
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLE-EFT--HQMK 191 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~-ti~--~~~p 191 (346)
.|+.++. ..|+++|+++......+.++....+.|++.+ +++||.++..+++++.++++...... .+. ...|
T Consensus 6 ~ll~~~~----~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p 81 (318)
T 3sov_A 6 LLLYANR----RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP 81 (318)
T ss_dssp EEEEECE----EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC
T ss_pred EEEEEcc----CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc
Confidence 5667754 5999999998752222333333345677776 58999999999999999988664222 222 2368
Q ss_pred ceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecC-CCeEEEEeCCCCe
Q 019103 192 DGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQ-TDCIARISHEDGV 267 (346)
Q Consensus 192 eGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~-sn~I~vID~~TG~ 267 (346)
+|+++.+.++.||++| +.+.|.++|++.... ..+.-.....| +.+.+. +|+||++.|. ...|.++|++-..
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P----~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQP----RAIALDPSSGFMYWTDWGEVPKIERAGMDGSS 156 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSE----EEEEEEGGGTEEEEEECSSSCEEEEEETTSCS
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCc----cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC
Confidence 9999999999999999 578999999875332 22221222233 446554 6899999986 6889999986432
Q ss_pred EEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 268 VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 268 Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
. ..+--. ....|||||+|+++++||+|.-.-.+|+.+.+.
T Consensus 157 ~-~~~~~~------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 157 R-FIIINS------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp C-EEEECS------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred e-EEEEEC------------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 2 222111 134789999999999999998888999988764
No 85
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=5.4e-11 Score=112.49 Aligned_cols=199 Identities=13% Similarity=0.028 Sum_probs=131.2
Q ss_pred eeEEEecCCE-EEEEcCC------C------CCCeEEEEECC-CCcEEEEecc-----CCCeeEEEEEEeCCEEEEEEee
Q 019103 108 QGLLYAENDT-LFESTGL------Y------GRSSVRRVALE-TGKVEAINQM-----EGSYFGEGLTLLGEKLFQVTWL 168 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGl------y------g~s~V~~iDl~-Tgkv~~~~~l-----~~~~FgeGit~~g~~LY~ltw~ 168 (346)
.++.++|||+ ||+.+.. | .+..+.+|+++ +|++...+.. ...+.+..++++|++||+++..
T Consensus 86 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~ 165 (365)
T 1jof_A 86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT 165 (365)
T ss_dssp GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC
Confidence 5789999997 3432221 1 35689999987 5877655542 2344444455567899999988
Q ss_pred CCEEEEEECC-CCcE--EEEEec---C-CCceeEEeeCCCEEEEEC-CCCeEEEE--eCCCCcEEE---EEEeccC---C
Q 019103 169 QKTGFIYDQN-NLNK--LEEFTH---Q-MKDGWGLATDGKVLFGSD-GSSMLYQI--DPQTLKVIR---KDIVRYK---G 232 (346)
Q Consensus 169 ~~~v~V~D~~-tl~~--i~ti~~---~-~peGwGLt~Dg~~LyvSd-Gs~~l~vI--Dp~T~kvi~---~I~V~~~---G 232 (346)
++.+.++|.+ +++. +.++.. + .|.+..+++||++||+++ .+++|.++ |+++++... ++..-.. |
T Consensus 166 ~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g 245 (365)
T 1jof_A 166 ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPD 245 (365)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCC
T ss_pred CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCC
Confidence 8999999988 6654 445542 2 367778999999999987 57788776 556776542 3433211 1
Q ss_pred ee-----eeeceeeE-ee-CC-EEEEEecCCC-----eEEEEeCC-CCeEEEE---EECCchhhhhhhccCCCCceeeEE
Q 019103 233 RE-----VRNLNELE-FI-KG-EVWANVWQTD-----CIARISHE-DGVVLGW---VLLPNLRERLVAAGYNGIDVLNGI 295 (346)
Q Consensus 233 ~p-----v~~lNELE-~~-~G-~LyaNv~~sn-----~I~vID~~-TG~Vv~~---I~l~~l~~~~~~~~~~~~~vlNGI 295 (346)
.. .....++. +. || +||+.+...+ .|.++|.+ +|++... +... ...+.++
T Consensus 246 ~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~-------------~~~~~~~ 312 (365)
T 1jof_A 246 RDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP-------------TSGGHSN 312 (365)
T ss_dssp BCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS-------------SCCTTCC
T ss_pred cccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC-------------CCCcccc
Confidence 11 00234566 44 45 7999887666 89999875 7886542 3210 1235789
Q ss_pred EEeC---CCCEEEEecCCCCcEEEEEE
Q 019103 296 AWDS---NRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 296 A~d~---~~~~LfVTGK~Wp~l~ev~l 319 (346)
|++| ++++|||+++.-++|.-.++
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 9999 89999999987776544443
No 86
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.39 E-value=4.4e-11 Score=117.21 Aligned_cols=175 Identities=12% Similarity=0.041 Sum_probs=126.4
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEe--CCEEEEEEeeC-CEEEEEECCCC
Q 019103 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL--GEKLFQVTWLQ-KTGFIYDQNNL 180 (346)
Q Consensus 106 FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~--g~~LY~ltw~~-~~v~V~D~~tl 180 (346)
...||+++. ++.||++.. +..+|.++|++.......+.-+ ..| .||+++ ++.||.++|.+ +++.++|.+..
T Consensus 160 ~p~glavD~~~~~lY~~d~--~~~~I~~~~~~g~~~~~l~~~~~~~P--~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKP--RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CEEEEEEETTTTEEEEEET--TTTEEEEECTTTCSEEEEEECSSCCE--EEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CcccEEEEecCCceEEEEC--CCCeEEEEeCCCCceEEEEeCCCCCc--ceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 447999996 679999976 5679999999876544333321 234 566665 68999999985 89999998643
Q ss_pred cEEEEEec--CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEecc--CCeeeeeceeeEeeCCEEEEEecCC
Q 019103 181 NKLEEFTH--QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRY--KGREVRNLNELEFIKGEVWANVWQT 255 (346)
Q Consensus 181 ~~i~ti~~--~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~--~G~pv~~lNELE~~~G~LyaNv~~s 255 (346)
....-+.. ..|.|.++++++++||++| +.+.|..+|...... +.+.-.. .+.|+. |...+++||++.|..
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~g----l~v~~~~lywtd~~~ 310 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFS----LAVFEDKVFWTDIIN 310 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEE----EEEETTEEEEEESSS
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEE----EEEeCCEEEEecCCC
Confidence 33222232 3578888999999999999 588999999865333 3332221 234554 777889999999999
Q ss_pred CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC
Q 019103 256 DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN 302 (346)
Q Consensus 256 n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 302 (346)
+.|.++|+.+|+.+..|.. ++ ..|.||++.....
T Consensus 311 ~~V~~~~~~~G~~~~~i~~-~~------------~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 311 EAIFSANRLTGSDVNLLAE-NL------------LSPEDMVLFHNLT 344 (400)
T ss_dssp CSEEEEESSSCCCCEEEEC-SC------------SCEEEEEEESGGG
T ss_pred CeEEEEEcCCCCceEEEec-CC------------CCCceEEEEeecc
Confidence 9999999999998888854 22 2467887754433
No 87
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.38 E-value=1.2e-10 Score=121.37 Aligned_cols=182 Identities=18% Similarity=0.159 Sum_probs=135.3
Q ss_pred CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEecC--CC
Q 019103 116 DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MK 191 (346)
Q Consensus 116 ~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~p 191 (346)
..|+.+++ ..|+++|+++.+....++++.-.-+.|++.+ +++||.++..+++|+.++.+.......+..+ .|
T Consensus 7 ~~Ll~s~~----~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 7 AFLLFSRR----ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CEEEEEET----TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred cEEEEEeC----CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 35666655 4999999998887666777643335667775 6899999999999999998765444444443 68
Q ss_pred ceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecC-CCeEEEEeCCCCe
Q 019103 192 DGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQ-TDCIARISHEDGV 267 (346)
Q Consensus 192 eGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~-sn~I~vID~~TG~ 267 (346)
+|.++.+.++.||++| +.++|.++|++.... ..+.-..-..| +.|..+ +|+||++.|. .+.|.+++++...
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P----~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSP----RALALDPAEGFMYWTEWGGKPKIDRAAMDGSE 157 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCE----EEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCc----ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc
Confidence 9999999999999999 588999999875432 22221222234 456665 7999999997 6789999987655
Q ss_pred EEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 268 VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 268 Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+...+ .+ ...|||||+|+++++||++...-+.|+.+.+.
T Consensus 158 ~~~l~--~~------------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 158 RTTLV--PN------------VGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp CEEEE--CS------------CSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEE--CC------------CCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 43333 12 23689999999999999999999999988764
No 88
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.36 E-value=3.4e-11 Score=114.79 Aligned_cols=158 Identities=11% Similarity=0.078 Sum_probs=114.9
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEEEe--CCEEEEEEee-CCEEEEEECCCCc
Q 019103 107 TQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLL--GEKLFQVTWL-QKTGFIYDQNNLN 181 (346)
Q Consensus 107 TqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~-~l~~~~FgeGit~~--g~~LY~ltw~-~~~v~V~D~~tl~ 181 (346)
..||+++. ++.||.+.. +...|.++|++........ .--..| .|++++ ++.||.++|. .+.|+++|.+- +
T Consensus 81 p~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~~~~~~~P--~giavdp~~g~ly~td~~~~~~I~r~~~dG-~ 155 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDS--ETNRIEVSNLDGSLRKVLFWQELDQP--RAIALDPSSGFMYWTDWGEVPKIERAGMDG-S 155 (318)
T ss_dssp CCEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSSE--EEEEEEGGGTEEEEEECSSSCEEEEEETTS-C
T ss_pred ccEEEEEcCCCeEEEEEC--CCCEEEEEECCCCcEEEEEeCCCCCc--cEEEEeCCCCEEEEEecCCCCEEEEEEcCC-C
Confidence 37999995 679999976 5679999999865322222 111234 556665 6899999996 69999999763 2
Q ss_pred EEEEE-e--cCCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCe
Q 019103 182 KLEEF-T--HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDC 257 (346)
Q Consensus 182 ~i~ti-~--~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~ 257 (346)
....+ . ...|.|.++++++++||++| +.+.|+.+|..... .+.+.-+..+.|.. |.+.++.+|++.|..+.
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~g----lav~~~~lywtd~~~~~ 230 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFA----LTLFEDILYWTDWSTHS 230 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEE----EEEETTEEEEEETTTTE
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceE----EEEeCCEEEEEecCCCe
Confidence 22222 2 23578888999999999999 58899999986422 22222222345544 77788999999999999
Q ss_pred EEEEeCCCCeEEEEEEC
Q 019103 258 IARISHEDGVVLGWVLL 274 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l 274 (346)
|.++|+.+|+.+..|..
T Consensus 231 V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 231 ILACNKYTGEGLREIHS 247 (318)
T ss_dssp EEEEETTTCCSCEEEEC
T ss_pred EEEEECCCCCceEEEeC
Confidence 99999999998888855
No 89
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.32 E-value=1.5e-10 Score=123.88 Aligned_cols=180 Identities=14% Similarity=0.128 Sum_probs=128.5
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCC----cEEEEEe--c
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNL----NKLEEFT--H 188 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl----~~i~ti~--~ 188 (346)
.|+.++. ..|++++++.++....+.-... ..|++++ +++||.++..+++|++++.+.. ....-+. .
T Consensus 397 ~Ll~an~----~~Ir~i~l~~~~~~~l~~~~~~--~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 397 YLFFTNR----HEVRKMTLDRSEYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp EEEEECB----SSEEEECTTSCCCEEEECSCSS--EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccc----cceeEeeccCCcceeeecCCCc--eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC
Confidence 5677754 4799999998876555543334 4667775 5899999999999999998753 2222233 2
Q ss_pred CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCC
Q 019103 189 QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHE 264 (346)
Q Consensus 189 ~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~ 264 (346)
..|+|.++.+.++.||++| +.++|.++|+..... ..+.-.....| +.|.+. +|+||++.|.. +.|.+++++
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P----~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKP----RAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCE----EEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCc----ceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 3689999999999999999 588999999875443 33322222234 335554 68999999987 889999997
Q ss_pred CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 265 DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
...+...+.. + ...|||||+|+.+++||++...-++|+.+.+.
T Consensus 546 G~~~~~lv~~-~------------l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 546 GVDIYSLVTE-N------------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp SCCEEEEECS-S------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEeC-C------------CCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 5554443321 2 23689999999999999998877888888763
No 90
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.31 E-value=9.7e-10 Score=101.30 Aligned_cols=193 Identities=12% Similarity=0.083 Sum_probs=127.1
Q ss_pred CCCCcceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCC
Q 019103 102 DPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 102 d~~~FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~t 179 (346)
....|.+|..++++ +.||.+.. ...+|.+||++++++ ....++..+. +++.+ +++||+++ ++.++++|+++
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~--~~~~i~~~d~~~~~~-~~~~~~~~~~--~i~~~~dG~l~v~~--~~~l~~~d~~~ 82 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDI--PAKKVCRWDSFTKQV-QRVTMDAPVS--SVALRQSGGYVATI--GTKFCALNWKE 82 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCE-EEEECSSCEE--EEEEBTTSSEEEEE--TTEEEEEETTT
T ss_pred cCCccccCCeEECCCCEEEEEEC--CCCEEEEEECCCCcE-EEEeCCCceE--EEEECCCCCEEEEE--CCeEEEEECCC
Confidence 35678899999984 58888865 456999999999986 4455666554 45554 23488887 68999999988
Q ss_pred CcEEEEEec--C----CCceeEEeeCCCEEEEEC------------CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 180 LNKLEEFTH--Q----MKDGWGLATDGKVLFGSD------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 180 l~~i~ti~~--~----~peGwGLt~Dg~~LyvSd------------Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
.+...-... + .+.+..+++||+ +|+++ ....|+.+|+. .++..... .+...|.+
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~------~~~~pngi 154 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD------QVDISNGL 154 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE------EESBEEEE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCEEEEee------ccccccce
Confidence 765332222 1 134455778887 77754 24589999986 44432111 12244667
Q ss_pred Eee-CC-EEEEEecCCCeEEEEeC--CCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 242 EFI-KG-EVWANVWQTDCIARISH--EDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 242 E~~-~G-~LyaNv~~sn~I~vID~--~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
.+. +| .||++....+.|.++|. ++|++...=.+..+.. ....|.|||+|++| +|||+.-.-..|+.+
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~--------~~~~p~g~~~d~~G-~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEK--------EEQIPDGMCIDAEG-KLWVACYNGGRVIRL 225 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCG--------GGCEEEEEEEBTTS-CEEEEEETTTEEEEE
T ss_pred EEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCC--------CCCCCCeeEECCCC-CEEEEEcCCCEEEEE
Confidence 665 44 79999888999999975 7887642111101110 12378999999997 699996555557666
Q ss_pred E
Q 019103 318 N 318 (346)
Q Consensus 318 ~ 318 (346)
.
T Consensus 226 d 226 (297)
T 3g4e_A 226 D 226 (297)
T ss_dssp C
T ss_pred c
Confidence 4
No 91
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=1.7e-10 Score=114.21 Aligned_cols=203 Identities=11% Similarity=0.082 Sum_probs=134.7
Q ss_pred ceeEEEec--CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC----EEEEEECCC-
Q 019103 107 TQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK----TGFIYDQNN- 179 (346)
Q Consensus 107 TqGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~----~v~V~D~~t- 179 (346)
..||+++| ++.||++.. + .+|++||++++++.........+.+..+...+++||++++.++ .+++++.+.
T Consensus 139 P~~lavdp~~~g~Lyv~d~--~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGE--Q-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEB--T-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCCCCCeEEEEeC--C-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 47999995 478999976 3 7999999999987766664455555444445678999998543 577788643
Q ss_pred CcEEEEEe-cCCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecCC
Q 019103 180 LNKLEEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQT 255 (346)
Q Consensus 180 l~~i~ti~-~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~s 255 (346)
+.....+. ...|.|.++++++++||++| +.++|+.+|+++.+......++..+.|. -|.+. +| +||+..+..
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCE----EEEECTTSSEEEEEETTT
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcce----eEEEcCCCCEEEEEECCC
Confidence 22123333 23578899999888899999 6889999999987764444444333343 36555 44 699999999
Q ss_pred CeEEEEeCC--CCeE--EEEEECC-c---hhhhhhhccCCCCceee-EEEEeC-------CCCEEEEecCCCCcEEEEE
Q 019103 256 DCIARISHE--DGVV--LGWVLLP-N---LRERLVAAGYNGIDVLN-GIAWDS-------NRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 256 n~I~vID~~--TG~V--v~~I~l~-~---l~~~~~~~~~~~~~vlN-GIA~d~-------~~~~LfVTGK~Wp~l~ev~ 318 (346)
++|.++|.+ +++. +.++.-. + ....... ......|+ |+|.++ ....|||+...-..|.++.
T Consensus 292 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~--~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~ 368 (430)
T 3tc9_A 292 HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGK--KARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT 368 (430)
T ss_dssp TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGG--GCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC
T ss_pred CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCc--ceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC
Confidence 999998876 3443 1122100 0 0000000 01234688 899974 3468999987777887764
No 92
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.29 E-value=4.8e-10 Score=119.94 Aligned_cols=191 Identities=10% Similarity=0.087 Sum_probs=131.0
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcE----EEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCC
Q 019103 107 TQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKV----EAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 107 TqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv----~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~t 179 (346)
..||+++. +++||++.. +..+|++++++.... ...+.. .-...+||+++ ++.||++++..++|.++|.+.
T Consensus 426 ~~gl~~d~~~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp EEEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eEEEeecccCCeeEEeec--cceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 37999996 569999976 567999999986321 222211 11224667775 689999999999999999875
Q ss_pred CcEEEEEec--CCCceeEEeeCCCEEEEEC-CC-CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEec
Q 019103 180 LNKLEEFTH--QMKDGWGLATDGKVLFGSD-GS-SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVW 253 (346)
Q Consensus 180 l~~i~ti~~--~~peGwGLt~Dg~~LyvSd-Gs-~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~ 253 (346)
.....-+.. ..|.|.+|.+.+++||++| |. ..|.++|....... .+.-.. +..+|.|.++ +|+||++.+
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-~lv~~~----l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVTEN----IQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEECSS----CSCEEEEEEETTTTEEEEEET
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-EEEeCC----CCCceEEEEecCCCeEEEEeC
Confidence 543333332 2588889999999999999 65 79999998754432 222221 2234556555 789999999
Q ss_pred CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 254 QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
..+.|.++|++...+...+.... ....|.|||++ +++||+|...-..|+++.
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~-----------~l~~P~glav~--~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEK-----------RLAHPFSLAVF--EDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTT-----------TTSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEecCCCceEEEecCCC-----------ccCCCCEEEEe--CCEEEEEECCCCEEEEEe
Confidence 99999999997655444442210 12256788885 569999988888888885
No 93
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=4.5e-10 Score=114.62 Aligned_cols=222 Identities=12% Similarity=0.157 Sum_probs=139.1
Q ss_pred ceeEEE-------ecCC-EEEEEcCCCC----CCeEEEEECCC-CcEE-----EEeccCCCeeEEEEEEeCCEEEEEEee
Q 019103 107 TQGLLY-------AEND-TLFESTGLYG----RSSVRRVALET-GKVE-----AINQMEGSYFGEGLTLLGEKLFQVTWL 168 (346)
Q Consensus 107 TqGL~~-------~~d~-~LyeStGlyg----~s~V~~iDl~T-gkv~-----~~~~l~~~~FgeGit~~g~~LY~ltw~ 168 (346)
..+|++ ++++ +||++.-.++ ...|.+++.+. |++. ..+.-..+++|..+...+++||++++.
T Consensus 188 p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~ 267 (496)
T 3kya_A 188 IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYE 267 (496)
T ss_dssp EEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETT
T ss_pred CcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECC
Confidence 369999 8887 4999976432 23588888655 4442 223222355443333345899999999
Q ss_pred CCEEEEEECC-------CCcE-----------EEE-EecC---CCceeEEeeCCCEEEEEC-CCCeEEEEeC--CCCcEE
Q 019103 169 QKTGFIYDQN-------NLNK-----------LEE-FTHQ---MKDGWGLATDGKVLFGSD-GSSMLYQIDP--QTLKVI 223 (346)
Q Consensus 169 ~~~v~V~D~~-------tl~~-----------i~t-i~~~---~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp--~T~kvi 223 (346)
++.+++||++ +.+. .++ +..+ .|.+.++++||+.||++| +.++|+.+|+ .+.++.
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~ 347 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFI 347 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceec
Confidence 9999999987 5554 223 2332 467788899999999999 6889999764 444332
Q ss_pred E-EEEecc---CCe--------eeeecee-eEe--------eCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchh---h
Q 019103 224 R-KDIVRY---KGR--------EVRNLNE-LEF--------IKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLR---E 279 (346)
Q Consensus 224 ~-~I~V~~---~G~--------pv~~lNE-LE~--------~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~---~ 279 (346)
. ++-.+. .|. .+..+.. +-. .+|.||++.+..++|.+||+ +|.|....-..... +
T Consensus 348 ~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~v~TiaG~g~~~~~~~ 426 (496)
T 3kya_A 348 TPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGIVSTYAGRGASTSLAD 426 (496)
T ss_dssp CCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCBEEEEEESCTTHHHHH
T ss_pred ccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCCEEEEecccccccccC
Confidence 1 222332 111 1222331 222 24789999999999999995 78765443221100 0
Q ss_pred ----hhhh---ccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeeccccccCC
Q 019103 280 ----RLVA---AGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMKRERKDG 329 (346)
Q Consensus 280 ----~~~~---~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~~~~~~~ 329 (346)
...+ +.....+.|.|||++++++.|||+...-.+|.+|.+..-...++.|
T Consensus 427 ~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~~ 483 (496)
T 3kya_A 427 GNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGDE 483 (496)
T ss_dssp SCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC------
T ss_pred ccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccCC
Confidence 0000 0012246799999999888999999999999999997644444444
No 94
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.28 E-value=1.6e-09 Score=99.53 Aligned_cols=207 Identities=15% Similarity=0.136 Sum_probs=133.9
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEec-cCCCeeEEEEEEe-CCEEEEEEeeC-
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ-MEGSYFGEGLTLL-GEKLFQVTWLQ- 169 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~-l~~~~FgeGit~~-g~~LY~ltw~~- 169 (346)
-+...+++. ...+..|++++++|+||++.. ....|.+||++++++..... .+.. ..+++.+ ++++|+++..+
T Consensus 34 ~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~--~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 34 AEPWLEISK-KGLQLEGLNFDRQGQLFLLDV--FEGNIFKINPETKEIKRPFVSHKAN--PAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp CEEEEEEES-SCCCEEEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECSSSS--EEEEEECTTSCEEEEECTTS
T ss_pred cceeEEEec-cCccccCcEECCCCCEEEEEC--CCCEEEEEeCCCCcEEEEeeCCCCC--cceEEECCCCcEEEEeCCCC
Confidence 334445543 344558999999999998755 34599999999998766442 2333 4567775 45799999877
Q ss_pred ---CEEEEEECCCCcEEEEEec---C-CCceeEEeeCCCEEEEECC-------CCeEEEEeCCCCcEEEEEEeccCCeee
Q 019103 170 ---KTGFIYDQNNLNKLEEFTH---Q-MKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREV 235 (346)
Q Consensus 170 ---~~v~V~D~~tl~~i~ti~~---~-~peGwGLt~Dg~~LyvSdG-------s~~l~vIDp~T~kvi~~I~V~~~G~pv 235 (346)
+.++++|+++.+....+.. . .+.+..+++||+ +|+++. ...|+.+|+++.+......- .
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~ 181 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------I 181 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------E
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEeecC------C
Confidence 7999999988776533321 1 234556677775 666543 46899999987665432211 1
Q ss_pred eeceeeEee-CC-EEEEEecCCCeEEEEeCCC-CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 236 RNLNELEFI-KG-EVWANVWQTDCIARISHED-GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 236 ~~lNELE~~-~G-~LyaNv~~sn~I~vID~~T-G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
...|.+.+. +| .||+.....+.|.++|+++ |+.+..+.-.... .......|+||+++++++ +||+...-.
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~------~~~~~~~~~~i~~d~~G~-l~v~~~~~~ 254 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY------YFTGHEGPDSCCIDSDDN-LYVAMYGQG 254 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEE------ECCSSSEEEEEEEBTTCC-EEEEEETTT
T ss_pred CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEE------ecCCCCCCCceEECCCCC-EEEEEcCCC
Confidence 223456554 45 6999887788999999974 5543322100000 001124789999999875 888865556
Q ss_pred cEEEEE
Q 019103 313 KLYEIN 318 (346)
Q Consensus 313 ~l~ev~ 318 (346)
.|+.+.
T Consensus 255 ~v~~~d 260 (333)
T 2dg1_A 255 RVLVFN 260 (333)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 777664
No 95
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.27 E-value=2.5e-10 Score=118.55 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=121.0
Q ss_pred EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcE-EEEEec--CCCc
Q 019103 118 LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNK-LEEFTH--QMKD 192 (346)
Q Consensus 118 LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~-i~ti~~--~~pe 192 (346)
|++++. ..|+++|++..+......++.-..+.|++.+ +++||.+++.++++++++.+.... ...+.. ..|+
T Consensus 12 ~~~~~~----~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 12 LLYANR----RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp EEEECS----SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred EEEecc----ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 566654 5999999997643333333333335667665 789999999999999999876543 223333 3689
Q ss_pred eeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCC-CeEEEEeCCCCeE
Q 019103 193 GWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQT-DCIARISHEDGVV 268 (346)
Q Consensus 193 GwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~s-n~I~vID~~TG~V 268 (346)
|.++++.++.||++| +.++|.++|+..... +.+.-.. +..++.|.++ +|+||++.|.. ..|.+++++-...
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~----l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~ 162 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQE----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 162 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS----CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCC----CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce
Confidence 999999999999999 588999999875432 2222122 2234456664 68999999974 5788888864332
Q ss_pred EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 269 LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 269 v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
...+.- ....|||||+|+++++||++...-..|+.+.+.
T Consensus 163 ~~l~~~-------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 163 FIIINS-------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEEECS-------------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEEeC-------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 222211 123689999999999999999988999988764
No 96
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=1.3e-09 Score=98.72 Aligned_cols=193 Identities=12% Similarity=0.113 Sum_probs=124.7
Q ss_pred CCcceeEEEecCCEEEEE-------cCCCCCCeEEEEECCCCcEEEEec-----cCCCeeEEEEEEeC--CEEEEEEeeC
Q 019103 104 RAFTQGLLYAENDTLFES-------TGLYGRSSVRRVALETGKVEAINQ-----MEGSYFGEGLTLLG--EKLFQVTWLQ 169 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeS-------tGlyg~s~V~~iDl~Tgkv~~~~~-----l~~~~FgeGit~~g--~~LY~ltw~~ 169 (346)
-.+.+|++++++|.||++ .. ....|.+||+++|++..... .... ..+++.+. ++||+++..
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~--~~~i~~~~~~g~l~v~~~~- 91 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGK--PAGEILRIDLKTGKKTVICKPEVNGYGGI--PAGCQCDRDANQLFVADMR- 91 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTE--ECCEEEEECTTTCCEEEEECCEETTEECC--EEEEEECSSSSEEEEEETT-
T ss_pred CCCccCceECCCCCEEEEEeccccCCC--CCCEEEEEeCCCCcEEEEEecccCCCCCC--CceEEEecCCCcEEEEECC-
Confidence 445589999999999988 33 34689999999998754332 1123 45677753 689999874
Q ss_pred CEEEEEECCCCcEEEE-Eec------CCCceeEEeeCCCEEEEEC-CC---------------CeEEEEeCCCCcEEEEE
Q 019103 170 KTGFIYDQNNLNKLEE-FTH------QMKDGWGLATDGKVLFGSD-GS---------------SMLYQIDPQTLKVIRKD 226 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~t-i~~------~~peGwGLt~Dg~~LyvSd-Gs---------------~~l~vIDp~T~kvi~~I 226 (346)
+.++++|++ .+.... ... ..+.+..+++|| .+|+++ +. +.|+.+|++ .+.....
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 489999988 655432 221 124566667777 567766 33 689999987 6654332
Q ss_pred EeccCCeeeeeceeeEee-----CC-EEEEEecCCCeEEEEeCC-CCeEEEEEECCchhhhhhhccCCCC-ceeeEEEEe
Q 019103 227 IVRYKGREVRNLNELEFI-----KG-EVWANVWQTDCIARISHE-DGVVLGWVLLPNLRERLVAAGYNGI-DVLNGIAWD 298 (346)
Q Consensus 227 ~V~~~G~pv~~lNELE~~-----~G-~LyaNv~~sn~I~vID~~-TG~Vv~~I~l~~l~~~~~~~~~~~~-~vlNGIA~d 298 (346)
.. ....|.+.+. +| .||++....+.|.++|++ +|++...-.+..+. ... ..|+||+++
T Consensus 169 ~~------~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~--------~~~~~~p~~i~~d 234 (314)
T 1pjx_A 169 TA------FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP--------GTHEGGADGMDFD 234 (314)
T ss_dssp EE------ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC--------CCSSCEEEEEEEB
T ss_pred cC------CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC--------CCCCCCCCceEEC
Confidence 21 1123445554 45 699998888999999987 67643211110111 011 468999999
Q ss_pred CCCCEEEEecCCCCcEEEEEE
Q 019103 299 SNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 299 ~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+++ ++||+...-..|+.+..
T Consensus 235 ~~G-~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 235 EDN-NLLVANWGSSHIEVFGP 254 (314)
T ss_dssp TTC-CEEEEEETTTEEEEECT
T ss_pred CCC-CEEEEEcCCCEEEEEcC
Confidence 987 68888654556776643
No 97
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.23 E-value=1.6e-11 Score=129.15 Aligned_cols=160 Identities=11% Similarity=0.030 Sum_probs=115.4
Q ss_pred ceeEEEe-cCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEE--eCCEEEEEEeeC-CEEEEEECCC--
Q 019103 107 TQGLLYA-ENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTL--LGEKLFQVTWLQ-KTGFIYDQNN-- 179 (346)
Q Consensus 107 TqGL~~~-~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~--~g~~LY~ltw~~-~~v~V~D~~t-- 179 (346)
..||+++ .++.||++.. +.++|.++|++...+...+..+ ..| .||++ .+++||+++|.. ++|.++|.+.
T Consensus 455 P~glavD~~~g~LY~tD~--~~~~I~v~d~dg~~~~~l~~~~~~~P--~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKRKTLFREQGSKP--RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CCCEECCCSSSBCEECCT--TTSCEEEEBSSSCCEEEECCCSSCCC--CCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred cceEEEEeeCCcEEEEec--cCCeEEEEecCCCceEEEEeCCCCCc--ceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 3699998 4568999965 6679999999876554443322 233 55666 468999999986 8999988753
Q ss_pred CcEEEEEecCCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEec-cCCeeeeeceeeEeeCCEEEEEecCCCe
Q 019103 180 LNKLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR-YKGREVRNLNELEFIKGEVWANVWQTDC 257 (346)
Q Consensus 180 l~~i~ti~~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~-~~G~pv~~lNELE~~~G~LyaNv~~sn~ 257 (346)
.+.+..-....|.|.++++++++||++| +.++|+++|+.......-+... ..+.|+. |.+..++||++.|..+.
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~g----lavd~~~lywtd~~~~~ 606 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS----LAVFEDKVFWTDIINEA 606 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCC----CEEETTEEEEECSTTTC
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceE----eEEECCEEEEEeCCCCe
Confidence 2222221233589999999999999999 5889999998753322111111 1234444 77778899999999999
Q ss_pred EEEEeCCCCeEEEEEEC
Q 019103 258 IARISHEDGVVLGWVLL 274 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l 274 (346)
|.+||+.+|+++..|.+
T Consensus 607 V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 607 IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEEEETTTEEEEECCCT
T ss_pred EEEEEccCCCceEEeec
Confidence 99999999999988854
No 98
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.22 E-value=2e-09 Score=112.00 Aligned_cols=195 Identities=11% Similarity=0.065 Sum_probs=136.8
Q ss_pred EEecCCCCcceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEe--CCEEEEEEeeCCEEE
Q 019103 98 EFPHDPRAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLL--GEKLFQVTWLQKTGF 173 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~--g~~LY~ltw~~~~v~ 173 (346)
.+|...-.-..||+|++ +++||++.. +..+|.+++++...+...+..+ .. ++|++++ ++.||.+++..+.|.
T Consensus 30 ~~~~~~~~~~~~l~~d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g~~~--P~GlAvD~~~~~LY~tD~~~~~I~ 105 (628)
T 4a0p_A 30 AIPLTGVKEASALDFDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFGLDY--PEGMAVDWLGKNLYWADTGTNRIE 105 (628)
T ss_dssp ECCCCSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSC--CCEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEcCCCCceEEEEEECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCCCCC--cceEEEEeCCCEEEEEECCCCEEE
Confidence 44543322337999996 569999976 5679999999876655444433 23 4667775 789999999999999
Q ss_pred EEECCCCcEEEEEe--cCCCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCE
Q 019103 174 IYDQNNLNKLEEFT--HQMKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGE 247 (346)
Q Consensus 174 V~D~~tl~~i~ti~--~~~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~ 247 (346)
++|.+......-+. ...|.|.++.|.++.||+|| | ..+|..+|+...... .+ +.. +..+|.|.++ +++
T Consensus 106 v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l-~~~----~~~P~GlalD~~~~~ 179 (628)
T 4a0p_A 106 VSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TL-VPN----VGRANGLTIDYAKRR 179 (628)
T ss_dssp EEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE-ECS----CSSEEEEEEETTTTE
T ss_pred EEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EE-ECC----CCCcceEEEccccCE
Confidence 99986433211121 22577888888899999999 6 679999998654432 22 222 2244556665 689
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 248 VWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 248 LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
||++....+.|.++|.+.+.. ..+. .. ...|.|||++. +++|+|...-..|+++.
T Consensus 180 LY~aD~~~~~I~~~d~dG~~~-~v~~-~~------------l~~P~glav~~--~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 180 LYWTDLDTNLIESSNMLGLNR-EVIA-DD------------LPHPFGLTQYQ--DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSC-EEEE-EC------------CSCEEEEEEET--TEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCEEEEEcCCCCce-EEee-cc------------CCCceEEEEEC--CEEEEecCCCCEEEEEE
Confidence 999999999999999976544 2221 01 23689999985 69999987678888876
No 99
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.21 E-value=9.3e-12 Score=130.86 Aligned_cols=180 Identities=13% Similarity=0.120 Sum_probs=126.0
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCC----CcEEEEEec--
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN----LNKLEEFTH-- 188 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~t----l~~i~ti~~-- 188 (346)
.||+++. ..|+++|++++++...+.....+ +|++++ +++||+++...++|+++|+++ ......+..
T Consensus 379 ~ll~~~~----~~I~~id~~~~~~~~~~~~~~~p--~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~ 452 (699)
T 1n7d_A 379 YLFFTNR----HEVRKMTLDRSEYTSLIPNLRNV--VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 452 (699)
T ss_dssp CBCCCCT----TC-CEECTTSCCEECCSCCCTTC--CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC
T ss_pred eEEecCc----cceEEEeCCCCcceeeeccCcce--EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC
Confidence 4566644 48999999998887666554555 456664 689999999999999999876 233233322
Q ss_pred CCCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEe--eCCEEEEEecCC-CeEEEEeCC
Q 019103 189 QMKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF--IKGEVWANVWQT-DCIARISHE 264 (346)
Q Consensus 189 ~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~--~~G~LyaNv~~s-n~I~vID~~ 264 (346)
..|+|.++.+.++.||++| +.+.|.++|+....+...+..+ ...| +.|.+ .+|+||++.|.. +.|.++|++
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~-~~~P----~giavDp~~g~ly~td~~~~~~I~~~~~d 527 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQ-GSKP----RAIVVDPVHGFMYWTDWGTPAKIKKGGLN 527 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCS-SCCC----CCEECCSSSSCCEECCCSSSCCEEBCCSS
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCC-CCCc----ceEEEccCCCcEEEcccCCCCeEEEEeCC
Confidence 2478888888899999999 5889999998865443222221 1223 34554 478999999876 789999886
Q ss_pred CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 265 DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.... ..+-. .....|||||+|+++++||++...-.+|+.+.+.
T Consensus 528 G~~~-~~l~~------------~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 528 GVDI-YSLVT------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp SCCC-CEESC------------SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred CCCe-eEEEe------------CCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 4322 22211 1134689999999999999999888899988774
No 100
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.18 E-value=2.9e-08 Score=89.20 Aligned_cols=186 Identities=12% Similarity=0.016 Sum_probs=131.6
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--eCCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
...+.+++++.++.+.+ .+..|.+||+.+++.+......... ...++. +++.|+. .-.++.+.++|.++.+.+.
T Consensus 144 i~~~~~~~~~~~l~~~~--~dg~v~~~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~-~~~dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 144 CYALAISPDSKVCFSCC--SDGNIAVWDLHNQTLVRQFQGHTDG-ASCIDISNDGTKLWT-GGLDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp EEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEE-EETTSEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEEe--CCCcEEEEeCCCCceeeeeecccCc-eEEEEECCCCCEEEE-EecCCcEEEEECCCCceEe
Confidence 47899999887666655 4468999999999988887643322 233455 4445554 4468999999999999999
Q ss_pred EEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEe
Q 019103 185 EFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARIS 262 (346)
Q Consensus 185 ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID 262 (346)
++... ......+++|++.|+++..++.|.++|..+.+.. ....+..+ +..+.+. +|+.++....++.|.+.|
T Consensus 220 ~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~~~---v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 220 QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY---QLHLHESC---VLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE---EECCCSSC---EEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE---EEcCCccc---eeEEEECCCCCEEEEecCCCcEEEEE
Confidence 98875 2355567889999999887889999999988754 22222222 2345555 565555555688999999
Q ss_pred CCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 263 HEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 263 ~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
..+++.+..... ....+.++|+|+++.|++++. .+.|+--
T Consensus 294 ~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~-dg~i~iw 333 (337)
T 1gxr_A 294 TPYGASIFQSKE--------------SSSVLSCDISVDDKYIVTGSG-DKKATVY 333 (337)
T ss_dssp TTTCCEEEEEEC--------------SSCEEEEEECTTSCEEEEEET-TSCEEEE
T ss_pred CCCCeEEEEecC--------------CCcEEEEEECCCCCEEEEecC-CCeEEEE
Confidence 999998755422 124688999999988776654 4544433
No 101
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.18 E-value=2.7e-09 Score=101.42 Aligned_cols=195 Identities=9% Similarity=0.051 Sum_probs=137.7
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
......+.|++||+++.+.+ .+..|++||+.+++.+....- ........+..++..++++.-.++.+.++|..+.+.
T Consensus 127 ~~~V~~v~~spdg~~l~sgs--~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 204 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGS--KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP 204 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC
T ss_pred CCCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce
Confidence 34457999999998888877 456999999999998887753 233333333345566777777889999999999999
Q ss_pred EEEEecCC----CceeEEeeCCCEEEE-ECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecCC
Q 019103 183 LEEFTHQM----KDGWGLATDGKVLFG-SDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQT 255 (346)
Q Consensus 183 i~ti~~~~----peGwGLt~Dg~~Lyv-SdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~s 255 (346)
+.++.... .....+++++..+++ ...+++|.++|.++.+.+.++.... .+ ++.+.+. +| ++.|+.-.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~--~~---v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHS--QC---VTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCS--SC---EEEEEECSSSSCCEEEEETT
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCC--CC---EEEEEEccCCCeEEEEEeCC
Confidence 98886431 123445666665555 4567899999999999888776533 23 3356665 44 677777678
Q ss_pred CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 256 DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 256 n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.+|.+-|..+++++... + + .+..+++||+|+++.+++||-...+|..=.+
T Consensus 280 ~~i~vwd~~~~~~~~~~---~-------H----~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 280 CSLAVLDSSLSELFRSQ---A-------H----RDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp SCEEEECTTCCEEEEEC---C-------C----SSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred CeEEEEECCCCcEEEEc---C-------C----CCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 89999999999875421 1 1 1246889999999999999887777754443
No 102
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.17 E-value=6.5e-10 Score=103.45 Aligned_cols=154 Identities=6% Similarity=0.021 Sum_probs=109.4
Q ss_pred CcceeEEEec-CCEEEEEcCC---------------CCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEE
Q 019103 105 AFTQGLLYAE-NDTLFESTGL---------------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVT 166 (346)
Q Consensus 105 ~FTqGL~~~~-d~~LyeStGl---------------yg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~lt 166 (346)
.+..++++++ +|+||++... .....|.++|.+++++.....-- .++.|++++ ++.||+++
T Consensus 126 ~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~--~~p~gia~~~dg~~lyv~d 203 (322)
T 2fp8_A 126 KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL--HVPGGAEVSADSSFVLVAE 203 (322)
T ss_dssp SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE--SCCCEEEECTTSSEEEEEE
T ss_pred cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC--ccCcceEECCCCCEEEEEe
Confidence 3457999999 9999998642 12368999999999865433211 223456664 56899999
Q ss_pred eeCCEEEEEECCCC-----cEEEEEecCCCceeEEeeCCCEEEEEC-C----------CCeEEEEeCCCCcEEEEEEecc
Q 019103 167 WLQKTGFIYDQNNL-----NKLEEFTHQMKDGWGLATDGKVLFGSD-G----------SSMLYQIDPQTLKVIRKDIVRY 230 (346)
Q Consensus 167 w~~~~v~V~D~~tl-----~~i~ti~~~~peGwGLt~Dg~~LyvSd-G----------s~~l~vIDp~T~kvi~~I~V~~ 230 (346)
..++.|.+||.++. +.....+ + |.|..+++||+ ||+++ + .+.|..+|++ ++++..+....
T Consensus 204 ~~~~~I~~~~~~~~~~~~~~~~~~~~-g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~ 279 (322)
T 2fp8_A 204 FLSHQIVKYWLEGPKKGTAEVLVKIP-N-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPP 279 (322)
T ss_dssp GGGTEEEEEESSSTTTTCEEEEEECS-S-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCT
T ss_pred CCCCeEEEEECCCCcCCccceEEeCC-C-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCC
Confidence 99999999998742 2223221 3 77777788885 99987 3 3689999985 78888887753
Q ss_pred CCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCC
Q 019103 231 KGREVRNLNELEFIKGEVWANVWQTDCIARISHED 265 (346)
Q Consensus 231 ~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~T 265 (346)
|.++..+..+...+|+||+.....+.|.+++++.
T Consensus 280 -g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 280 -PFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp -TTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred -CCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 3333444445567899999999999999999864
No 103
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.17 E-value=5e-09 Score=108.83 Aligned_cols=192 Identities=10% Similarity=0.022 Sum_probs=128.6
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcE
Q 019103 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 106 FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
...||++++ +++||++.- ...+|.+++++.......+...+-..++|++++ +++||+++...+.|.++|.+....
T Consensus 41 ~~~~ld~~~~~~~ly~sD~--~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDV--SEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEETTTTEEEEEET--TTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEeCCCEEEEEEC--CCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 347999996 568999965 567999999987642222222221235778886 689999999999999999875432
Q ss_pred EEEEe--cCCCceeEEeeCCCEEEEEC-C-CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCC
Q 019103 183 LEEFT--HQMKDGWGLATDGKVLFGSD-G-SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTD 256 (346)
Q Consensus 183 i~ti~--~~~peGwGLt~Dg~~LyvSd-G-s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn 256 (346)
..-+. ...|.|.++.+.++.||+|| | ...|...++..-. ...+ +.. .+..+|-|..+ +++||++....+
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~~~l-~~~---~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFII-INS---EIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE-ECS---SCSSEEEEEEETTTTEEEEEETTTC
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-eEEE-EeC---CCCCCcEEEEEccCCEEEEEeCCCC
Confidence 22221 23588999999999999999 6 4689999876432 2222 222 12344556665 789999999999
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.|.++|.+.......+.- ....|.|||++++ ++|+|.-....|+.+..
T Consensus 194 ~I~~~~~dG~~~~~~~~~-------------~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 194 FIHKSNLDGTNRQAVVKG-------------SLPHPFALTLFED--ILYWTDWSTHSILACNK 241 (619)
T ss_dssp CEEEESSSCCEEC----------------------CCCEEESSS--EEEEECTTTCSEEEEES
T ss_pred eEEEecCCCCccEEEEeC-------------CCCCceEEEEeCC--EEEEecCCCCEEEEEEC
Confidence 999999976543322210 1235789999855 99999777788888764
No 104
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.16 E-value=1.2e-09 Score=111.56 Aligned_cols=203 Identities=9% Similarity=0.058 Sum_probs=136.8
Q ss_pred eeEEEec--CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC----CeeEEEE-------EEeCCEEEEEEeeC-----
Q 019103 108 QGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGL-------TLLGEKLFQVTWLQ----- 169 (346)
Q Consensus 108 qGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~----~~FgeGi-------t~~g~~LY~ltw~~----- 169 (346)
.||+|+| +++||++.. +...|+++|++++++......+. ++++..+ +.++++||+++|.+
T Consensus 142 ~~la~dp~~~~~Lyv~~~--~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYD--GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEE--TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CEEEEccCCCCEEEEEEC--CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 5999997 358999976 45689999999999887766543 4555444 55678899999987
Q ss_pred -CEEEEEECCC-CcEE-----EEEe-cCCCceeEEeeCCCEEEEEC-CCCeEEEEeCC-------CCcE-----------
Q 019103 170 -KTGFIYDQNN-LNKL-----EEFT-HQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-------TLKV----------- 222 (346)
Q Consensus 170 -~~v~V~D~~t-l~~i-----~ti~-~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~-------T~kv----------- 222 (346)
+.++++|++. ++.. ..++ +..|.|..+++++++||++| +.++|+.+|++ +.++
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 3489998655 2221 2232 23578888999999999999 68899999998 6654
Q ss_pred EEE-EEeccCCeeeeeceeeEee-CC-EEEEEecCCCeEEEEeC--CCCeEE--EEE-EC---CchhhhhhhccCCCCce
Q 019103 223 IRK-DIVRYKGREVRNLNELEFI-KG-EVWANVWQTDCIARISH--EDGVVL--GWV-LL---PNLRERLVAAGYNGIDV 291 (346)
Q Consensus 223 i~~-I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~--~TG~Vv--~~I-~l---~~l~~~~~~~~~~~~~v 291 (346)
.+. ..++..+.|.+ +.+. +| +||++.+..++|.+||. .++++. .++ -. .+...... .....+.
T Consensus 300 ~~~l~~~~~~~~p~~----ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~--~~a~f~~ 373 (496)
T 3kya_A 300 FKQLFTIADPSWEFQ----IFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVG--TEARMNN 373 (496)
T ss_dssp EEEEEECSSSSCCEE----EEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBG--GGCBCSS
T ss_pred cceeEecCCCCCceE----EEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcc--cccccCC
Confidence 223 34544344544 5454 44 69999999999999765 556542 111 11 01000000 0122457
Q ss_pred ee-EEEEeC------CCCEEEEecCCCCcEEEEE
Q 019103 292 LN-GIAWDS------NRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 292 lN-GIA~d~------~~~~LfVTGK~Wp~l~ev~ 318 (346)
|. |++.+. ....|||+...-..|.++.
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~ 407 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT 407 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEe
Confidence 89 888873 4568999988888888875
No 105
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.16 E-value=5.3e-09 Score=95.12 Aligned_cols=152 Identities=15% Similarity=0.180 Sum_probs=111.8
Q ss_pred CeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEE
Q 019103 149 SYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVI 223 (346)
Q Consensus 149 ~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi 223 (346)
..++||++.+ ++.||.++..++.++++|+++. ...+... .+.+..+++||+ ||+++ +.+.|.++|+++++..
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEE
Confidence 4578999986 4569999999999999999987 5666543 355666677777 56665 6789999999888865
Q ss_pred EEEEeccCCeeeeeceeeEee-CCEEEEEec-----------------CCCeEEEEeCCCCeEEEEEECCchhhhhhhcc
Q 019103 224 RKDIVRYKGREVRNLNELEFI-KGEVWANVW-----------------QTDCIARISHEDGVVLGWVLLPNLRERLVAAG 285 (346)
Q Consensus 224 ~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~-----------------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~ 285 (346)
... -...+.+...+|.+.+. +|++|++.. ..+.|.++|++ |++.....
T Consensus 104 ~~~-~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~------------ 169 (296)
T 3e5z_A 104 SIA-DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR------------ 169 (296)
T ss_dssp EEE-CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC------------
T ss_pred EEe-eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec------------
Confidence 332 22344555567777766 689999742 13589999998 77643321
Q ss_pred CCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 286 YNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 286 ~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
....+||||++|+++.+ +++..-..|+...+.
T Consensus 170 --~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 170 --DRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLN 201 (296)
T ss_dssp --CCSSEEEEEECTTSCEE-EEETTTTEEEEEEEC
T ss_pred --CCCCCccEEECCCCCEE-EEeCCCCeEEEEEEC
Confidence 12368999999999999 998888899888774
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.14 E-value=6.7e-09 Score=98.29 Aligned_cols=196 Identities=11% Similarity=0.068 Sum_probs=136.9
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCc-------EEEEecc-CCCeeEEEEEEe--CCEEEEEEeeCCEEEE
Q 019103 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGK-------VEAINQM-EGSYFGEGLTLL--GEKLFQVTWLQKTGFI 174 (346)
Q Consensus 106 FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgk-------v~~~~~l-~~~~FgeGit~~--g~~LY~ltw~~~~v~V 174 (346)
....+.+++ ++.++.+++ .+..|++||+.+++ .+..+.- .... ..++.. ++.++++.-.++.+.+
T Consensus 83 ~V~~~~~~p~~~~~l~s~s--~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGS--EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRV--GIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CEEEEEECTTCTTEEEEEE--TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCE--EEEEECSSBTTEEEEEETTSCEEE
T ss_pred CEEEEEeCCCCCCEEEEEe--CCCeEEEEEccCCCCccccCCceEEecCCCCeE--EEEEECcCCCCEEEEEcCCCEEEE
Confidence 347899998 777777777 45699999999983 3333332 2233 334443 4346666667899999
Q ss_pred EECCCCcEEEEEe--c-C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEE
Q 019103 175 YDQNNLNKLEEFT--H-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVW 249 (346)
Q Consensus 175 ~D~~tl~~i~ti~--~-~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~Ly 249 (346)
+|..+.+.+.++. . . .-....+++||+.|+++..++.|.++|+++.+.+.++..+..+.. ...+.+. +|+++
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 235 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR---PVHAVFVSEGKIL 235 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSS---CCEEEECSTTEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCc---ceEEEEcCCCcEE
Confidence 9999999999994 2 2 124455778999999988889999999999999888754332221 1234444 67776
Q ss_pred EEe---cCCCeEEEEeCCCCeE-EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 250 ANV---WQTDCIARISHEDGVV-LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 250 aNv---~~sn~I~vID~~TG~V-v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+.. ..++.|.+.|..+++. +....+. .......++|+|+++.||++|.....|+-.++.
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEPLSLQELD------------TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSCSEEEECC------------CCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred EEeccCCCCceEEEEcCccccCCceEEecc------------CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence 665 4677899999999764 3333221 112357799999999999999888877776664
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.14 E-value=2.2e-08 Score=90.94 Aligned_cols=196 Identities=10% Similarity=0.025 Sum_probs=136.6
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee----C
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL----Q 169 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~----~ 169 (346)
+.+.++... ......+.+++++.++.+++ .+..|.+||+.+++.+.....+.......+..+++.++..... +
T Consensus 65 ~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~ 141 (369)
T 3zwl_B 65 ERLGTLDGH-TGTIWSIDVDCFTKYCVTGS--ADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNP 141 (369)
T ss_dssp CEEEEECCC-SSCEEEEEECTTSSEEEEEE--TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBC
T ss_pred hhhhhhhhc-CCcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCC
Confidence 455666522 23347999999887777766 4569999999999999998866665444444455655555433 3
Q ss_pred CEEEEEECCCCcEEEEEe-----------cC----CCceeEEeeCCCEEEEECCCCeEEEEeCCC-CcEEEEEEeccCCe
Q 019103 170 KTGFIYDQNNLNKLEEFT-----------HQ----MKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGR 233 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~ti~-----------~~----~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~~~G~ 233 (346)
+.+.++|..+.+....+. .. ......+++|++.|+++..++.|.++|..+ .+.+..+.... .
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~ 219 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE--K 219 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS--S
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC--C
Confidence 899999987664332222 11 123344678999999988889999999998 77777776533 2
Q ss_pred eeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC
Q 019103 234 EVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW 311 (346)
Q Consensus 234 pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W 311 (346)
++ ..+.+. +|..++..-.++.|.+.|..+++.+..+... ...+.++++|+++.+++++..-
T Consensus 220 ~v---~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 220 SI---SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--------------CPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp CE---EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--------------SCEEEEEECSSSSEEEEEECCC
T ss_pred ce---eEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--------------CCceeEEecCCCceEEEeecCC
Confidence 22 345554 5555555556889999999999999988631 2457899999999999887654
No 108
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.13 E-value=1e-08 Score=95.01 Aligned_cols=181 Identities=15% Similarity=0.146 Sum_probs=124.8
Q ss_pred CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC--CeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecCC-Cc
Q 019103 116 DTLFESTGLYGRSSVRRVALETGKVEAINQMEG--SYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM-KD 192 (346)
Q Consensus 116 ~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~--~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~-pe 192 (346)
++++++.. +++.|.+||.+||+++-+++.+. .+...-++.. +++|+ + .++.+..+|+ +++++.++..+. .+
T Consensus 5 ~~~lv~~~--~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd-G~ilv-s-~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGS--GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA-GEILF-S-YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECT--TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT-SCEEE-E-CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CcEEEeeC--CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC-CCEEE-e-CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 56666655 67899999999999999998764 3333333334 45666 3 3688999999 899999998741 12
Q ss_pred --eeEEeeCCCEEEEECC-CCeEEEEeCCCCcEEEEEEeccCC-eeeeeceeeE-eeCCEEEEEecCCCeEEEEeCCCCe
Q 019103 193 --GWGLATDGKVLFGSDG-SSMLYQIDPQTLKVIRKDIVRYKG-REVRNLNELE-FIKGEVWANVWQTDCIARISHEDGV 267 (346)
Q Consensus 193 --GwGLt~Dg~~LyvSdG-s~~l~vIDp~T~kvi~~I~V~~~G-~pv~~lNELE-~~~G~LyaNv~~sn~I~vID~~TG~ 267 (346)
+....+||+.+++..+ ..+|+.+|+ +++++.++.+.... .+......+. ..+|.++++....+.|..+|++ |+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 3346678998887555 789999997 78999888875321 1111111122 2378888888889999999999 99
Q ss_pred EEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 268 VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 268 Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
++-++..+. .+.+++..++++.+ |++-...+|+++..
T Consensus 157 ~~w~~~~~~--------------~~~~~~~~~~g~~~-v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 157 LLNSVKLSG--------------TPFSSAFLDNGDCL-VACGDAHCFVQLNL 193 (276)
T ss_dssp EEEEEECSS--------------CCCEEEECTTSCEE-EECBTTSEEEEECT
T ss_pred EEEEEECCC--------------CccceeEcCCCCEE-EEeCCCCeEEEEeC
Confidence 998886621 34667777776644 44444456766653
No 109
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.13 E-value=6.2e-08 Score=90.32 Aligned_cols=197 Identities=12% Similarity=0.113 Sum_probs=138.8
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--eCCEEEEEEeeCCE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQKT 171 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~g~~LY~ltw~~~~ 171 (346)
+.+.++...+.. ...+.|+||+..+.+.+ .+..|.+||+.+++....+..... +...++. +++.|. +.-.++.
T Consensus 113 ~~~~~~~~~~~~-~~~~~~spdg~~l~~g~--~dg~v~i~~~~~~~~~~~~~~~~~-~v~~~~~spdg~~la-sg~~dg~ 187 (321)
T 3ow8_A 113 KQIKSIDAGPVD-AWTLAFSPDSQYLATGT--HVGKVNIFGVESGKKEYSLDTRGK-FILSIAYSPDGKYLA-SGAIDGI 187 (321)
T ss_dssp EEEEEEECCTTC-CCCEEECTTSSEEEEEC--TTSEEEEEETTTCSEEEEEECSSS-CEEEEEECTTSSEEE-EEETTSC
T ss_pred CEEEEEeCCCcc-EEEEEECCCCCEEEEEc--CCCcEEEEEcCCCceeEEecCCCc-eEEEEEECCCCCEEE-EEcCCCe
Confidence 345555533322 25799999998777766 456999999999998777654432 2334444 444444 4456789
Q ss_pred EEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEE
Q 019103 172 GFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEV 248 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~L 248 (346)
+.++|..+.+.+.++... .-....++||++.|+.+..+.+|.++|.++.+.+.++.-.. .+ ++.+.+. +|..
T Consensus 188 i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~--~~---v~~~~~sp~~~~ 262 (321)
T 3ow8_A 188 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA--SW---VLNVAFCPDDTH 262 (321)
T ss_dssp EEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS--SC---EEEEEECTTSSE
T ss_pred EEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC--Cc---eEEEEECCCCCE
Confidence 999999999999998742 22566788999999988888899999999998876654322 22 2345555 5666
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 249 WANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 249 yaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
++..-.+..|.+-|..+++.+.++.- -....++++|+|+++.|+.+| ....|
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~-------------h~~~v~~v~~s~~g~~l~s~~-~d~~i 314 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFD-------------HQDQVWGVKYNGNGSKIVSVG-DDQEI 314 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECC-------------CSSCEEEEEECTTSSEEEEEE-TTCCE
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcC-------------CCCcEEEEEECCCCCEEEEEe-CCCeE
Confidence 66666788999999999999888732 112468899999998876555 34443
No 110
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.11 E-value=3.9e-08 Score=88.39 Aligned_cols=202 Identities=11% Similarity=0.068 Sum_probs=135.1
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEe---cc-CCCeeEEEEEEe--CCEEEEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN---QM-EGSYFGEGLTLL--GEKLFQV 165 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~---~l-~~~~FgeGit~~--g~~LY~l 165 (346)
..+.+...+|.... ..+.++++++++.+.+ +..|++||+.+++....+ .. +....-..++.. ++.|+.
T Consensus 41 ~~~~~~~~~h~~~v--~~~~~~~~~~~l~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~- 114 (337)
T 1gxr_A 41 HARQINTLNHGEVV--CAVTISNPTRHVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIV- 114 (337)
T ss_dssp EEEEEEEECCSSCC--CEEEECSSSSEEEEEC---BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEE-
T ss_pred ccccceeccCCCce--EEEEEecCCcEEEEcC---CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEE-
Confidence 35566777885444 6999999998776655 459999999987632222 11 222223334443 444544
Q ss_pred EeeCCEEEEEECCCCc--EEEEEecCCC--ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 166 TWLQKTGFIYDQNNLN--KLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~--~i~ti~~~~p--eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
.-.++.+.++|.++.+ ....+..... ....+++|++.|++...++.|.++|.++.+.+.++.... .+ +..+
T Consensus 115 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~--~~---i~~~ 189 (337)
T 1gxr_A 115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT--DG---ASCI 189 (337)
T ss_dssp EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SC---EEEE
T ss_pred EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc--Cc---eEEE
Confidence 4567899999999887 4445543212 344567899999998888899999999998887765432 22 2345
Q ss_pred Eee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 242 EFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 242 E~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.+. +|..++....++.|.+.|.++++.+..+... .....++|+|+++.+++++. ...++-..+
T Consensus 190 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~ 253 (337)
T 1gxr_A 190 DISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--------------SQIFSLGYCPTGEWLAVGME-SSNVEVLHV 253 (337)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--------------SCEEEEEECTTSSEEEEEET-TSCEEEEET
T ss_pred EECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--------------CceEEEEECCCCCEEEEEcC-CCcEEEEEC
Confidence 555 5555555556889999999999998887541 13578999999988877654 344544443
No 111
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.11 E-value=6.2e-08 Score=88.06 Aligned_cols=201 Identities=11% Similarity=0.039 Sum_probs=139.5
Q ss_pred eEEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCC
Q 019103 93 IQVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQK 170 (346)
Q Consensus 93 ~~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~ 170 (346)
+.+..++. | ......+.|++++.++.+++ .+..|++||+.+++....+.-.... -..++... +.+.++.-.++
T Consensus 13 ~~~~~~~~gh--~~~v~~~~~s~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d~ 87 (312)
T 4ery_A 13 YALKFTLAGH--TKAVSSVKFSPNGEWLASSS--ADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDDK 87 (312)
T ss_dssp CEEEEEECCC--SSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEEccc--CCcEEEEEECCCCCEEEEee--CCCeEEEEeCCCcccchhhccCCCc-eEEEEEcCCCCEEEEECCCC
Confidence 45555554 4 33347999999998777777 4569999999999988777543222 12344432 23444455689
Q ss_pred EEEEEECCCCcEEEEEecCCC--ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCE
Q 019103 171 TGFIYDQNNLNKLEEFTHQMK--DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGE 247 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~~p--eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~ 247 (346)
.+.++|.++.+.+.++..... ....++++++.|+....+..|.++|.++.+.+.++.... .++ +.+.+. +|.
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~v---~~~~~~~~~~ 162 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS--DPV---SAVHFNRDGS 162 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCE---EEEEECTTSS
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC--CcE---EEEEEcCCCC
Confidence 999999999999998874311 334577899999888778899999999999887765532 232 345554 566
Q ss_pred EEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 248 VWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 248 LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
+++..-.++.|.+.|..+++.+..+... .....+.++|+|+++.|++++. ...+.-
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~-d~~i~i 218 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQCLKTLIDD------------DNPPVSFVKFSPNGKYILAATL-DNTLKL 218 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCS------------SCCCEEEEEECTTSSEEEEEET-TTEEEE
T ss_pred EEEEEeCCCcEEEEECCCCceeeEEecc------------CCCceEEEEECCCCCEEEEEcC-CCeEEE
Confidence 6666656889999999999988776321 1224578999999988776654 344433
No 112
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.09 E-value=5.7e-08 Score=92.53 Aligned_cols=211 Identities=10% Similarity=0.062 Sum_probs=142.1
Q ss_pred ceeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-----------------ee
Q 019103 89 SIYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-----------------YF 151 (346)
Q Consensus 89 ~~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-----------------~F 151 (346)
.....++.+.+.|... ...+.|+|||+++.+.. +..+++||..+|+.+..+.-... .+
T Consensus 51 ~~~~~~~~~~~~h~~~--V~~v~fspdg~~la~g~---~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 125 (393)
T 1erj_A 51 REIDVELHKSLDHTSV--VCCVKFSNDGEYLATGC---NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLY 125 (393)
T ss_dssp CCEEEEEEEEEECSSC--CCEEEECTTSSEEEEEC---BSCEEEEETTTCCEEEEECC-----------------CCCCB
T ss_pred cccCceeEEecCCCCE--EEEEEECCCCCEEEEEc---CCcEEEEEecCCCEEEEecCccccccccccccccccCCCcee
Confidence 3445677788878443 36999999998666533 35899999999998877643211 11
Q ss_pred EEEEEE--eCCEEEEEEeeCCEEEEEECCCCcEEEEEecCC--CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEE
Q 019103 152 GEGLTL--LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM--KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDI 227 (346)
Q Consensus 152 geGit~--~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~--peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~ 227 (346)
-..++. +++.| ++.-.++.+.++|.++.+.+.++.... -....+++|++.|+.+..+.+|.++|.++.+...++.
T Consensus 126 v~~v~~s~dg~~l-~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 126 IRSVCFSPDGKFL-ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 223444 34444 445568999999999999988886321 1344567899999887788999999999999887776
Q ss_pred eccCCeeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEE
Q 019103 228 VRYKGREVRNLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIF 305 (346)
Q Consensus 228 V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~Lf 305 (346)
.... ...+.+. +|.++|..-.++.|.+.|.++++++..+...... . ..-....+.++|+|+++.|+
T Consensus 205 ~~~~------v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~-~-----~~h~~~v~~v~~~~~g~~l~ 272 (393)
T 1erj_A 205 IEDG------VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENES-G-----TGHKDSVYSVVFTRDGQSVV 272 (393)
T ss_dssp CSSC------EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------CCCSSCEEEEEECTTSSEEE
T ss_pred cCCC------cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccC-C-----CCCCCCEEEEEECCCCCEEE
Confidence 5331 1223343 6777777767889999999999998888541110 0 01124578899999998775
Q ss_pred EecCCCCcEEEEE
Q 019103 306 VTGKLWPKLYEIN 318 (346)
Q Consensus 306 VTGK~Wp~l~ev~ 318 (346)
.. -...+|.--+
T Consensus 273 s~-s~d~~v~~wd 284 (393)
T 1erj_A 273 SG-SLDRSVKLWN 284 (393)
T ss_dssp EE-ETTSEEEEEE
T ss_pred EE-eCCCEEEEEE
Confidence 54 4445444433
No 113
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.08 E-value=9.7e-09 Score=94.73 Aligned_cols=152 Identities=14% Similarity=0.275 Sum_probs=109.4
Q ss_pred CeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEE
Q 019103 149 SYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVI 223 (346)
Q Consensus 149 ~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi 223 (346)
..++||...+ ++.||.++..++.++.+|+ +.+ ...+... .+.|..+++||+ ||+++ +.+.|+.+|++ .+..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQAH 119 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCC-EEEEECCCCEEEEECCC-CCEE
Confidence 4468998875 5679999999999999998 444 3444332 356666777777 77765 67899999986 5543
Q ss_pred EEEEeccCCeeeeeceeeEee-CCEEEEEec-----------------CCCeEEEEeCCCCeEEEEEECCchhhhhhhcc
Q 019103 224 RKDIVRYKGREVRNLNELEFI-KGEVWANVW-----------------QTDCIARISHEDGVVLGWVLLPNLRERLVAAG 285 (346)
Q Consensus 224 ~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~-----------------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~ 285 (346)
.+.-...+.+...+|.+.+. +|.+|++.. ..+.|.++|+++|++.... ++
T Consensus 120 -~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~-------- 187 (305)
T 3dr2_A 120 -LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DL-------- 187 (305)
T ss_dssp -EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EE--------
T ss_pred -EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cC--------
Confidence 33323356666677888777 789999641 1357999999999875433 21
Q ss_pred CCCCceeeEEEEeCCCCEEEEecCCC-----CcEEEEEEe
Q 019103 286 YNGIDVLNGIAWDSNRNRIFVTGKLW-----PKLYEINLR 320 (346)
Q Consensus 286 ~~~~~vlNGIA~d~~~~~LfVTGK~W-----p~l~ev~l~ 320 (346)
..|||||++|+++.|||+...- ..|+.+.+.
T Consensus 188 ----~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 188 ----DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp ----SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred ----CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 2579999999999999997653 678887764
No 114
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.08 E-value=1.8e-08 Score=105.25 Aligned_cols=204 Identities=10% Similarity=0.073 Sum_probs=140.2
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-C----CeeEEEEEEeCCEEEEEEee-----CCEEEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-G----SYFGEGLTLLGEKLFQVTWL-----QKTGFIYD 176 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~----~~FgeGit~~g~~LY~ltw~-----~~~v~V~D 176 (346)
..|+++. ++++|+++. +..|..+|++||+++-+..++ . ..+...-.+.++++|+.+.. ++.++.||
T Consensus 121 ~~~~a~~-~~~v~v~~~---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D 196 (677)
T 1kb0_A 121 NRGVALW-KGKVYVGAW---DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYD 196 (677)
T ss_dssp CCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEE
T ss_pred CCCceEE-CCEEEEEcC---CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEE
Confidence 3578886 589999865 369999999999999888775 2 11111234568999998874 68999999
Q ss_pred CCCCcEEEEEecCCCc----------------------------------eeEEeeCCCEEEEECCC-------------
Q 019103 177 QNNLNKLEEFTHQMKD----------------------------------GWGLATDGKVLFGSDGS------------- 209 (346)
Q Consensus 177 ~~tl~~i~ti~~~~pe----------------------------------GwGLt~Dg~~LyvSdGs------------- 209 (346)
++|++++-++....+. ...++++++.+|+..++
T Consensus 197 ~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~ 276 (677)
T 1kb0_A 197 AETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKG 276 (677)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTC
T ss_pred CCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccC
Confidence 9999999999863111 23467789999997643
Q ss_pred ------CeEEEEeCCCCcEEEEEEeccC--------CeeeeeceeeEeeCC---EEEEEecCCCeEEEEeCCCCeEEEEE
Q 019103 210 ------SMLYQIDPQTLKVIRKDIVRYK--------GREVRNLNELEFIKG---EVWANVWQTDCIARISHEDGVVLGWV 272 (346)
Q Consensus 210 ------~~l~vIDp~T~kvi~~I~V~~~--------G~pv~~lNELE~~~G---~LyaNv~~sn~I~vID~~TG~Vv~~I 272 (346)
+.|+.+|++|++++-+.++..+ ..|+- -+.. .+| .+++..-....|.++|.+||+++..+
T Consensus 277 gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l--~~~~-~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 277 GDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMIL--ADIK-IAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp CCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEE--EEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEE--Eecc-cCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 3699999999999988887432 11221 1111 256 34444445789999999999999988
Q ss_pred ECCchh----------hhh------------hhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 273 LLPNLR----------ERL------------VAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 273 ~l~~l~----------~~~------------~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
.+.... +.. .-.+........++||||+++.+||....++..|+.
T Consensus 354 ~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 420 (677)
T 1kb0_A 354 NFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMD 420 (677)
T ss_dssp ESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEE
T ss_pred cccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeec
Confidence 764311 000 000011223446899999999999987777666553
No 115
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.07 E-value=2.7e-09 Score=103.96 Aligned_cols=163 Identities=15% Similarity=0.153 Sum_probs=119.5
Q ss_pred CCeeEEEEEEeC--CEEEEEEeeCCEEEEEECCCCcEEE-EEec----C----CCceeEE---eeCCCEEEE-EC-----
Q 019103 148 GSYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLNKLE-EFTH----Q----MKDGWGL---ATDGKVLFG-SD----- 207 (346)
Q Consensus 148 ~~~FgeGit~~g--~~LY~ltw~~~~v~V~D~~tl~~i~-ti~~----~----~peGwGL---t~Dg~~Lyv-Sd----- 207 (346)
.+.|+||+..+. +++|+.++.++.|.++|+.+..... .++. + .+.|.++ .++ ++||+ +|
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcccccc
Confidence 467899999985 9999999999999999998654433 3332 1 1245555 345 57776 66
Q ss_pred --------CCCeEEEEeCC---CCcEEEEEEecc--C------CeeeeeceeeEee-CCEEEEEecCC-CeEEEEeCCCC
Q 019103 208 --------GSSMLYQIDPQ---TLKVIRKDIVRY--K------GREVRNLNELEFI-KGEVWANVWQT-DCIARISHEDG 266 (346)
Q Consensus 208 --------Gs~~l~vIDp~---T~kvi~~I~V~~--~------G~pv~~lNELE~~-~G~LyaNv~~s-n~I~vID~~TG 266 (346)
|.+.|+.+|+. |.+.+..+.... . |+.....|++..+ +|.+||+.-.. +.|.+|||+-.
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 46889999999 888887777632 1 2234457888877 68999977777 99999999866
Q ss_pred eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 267 VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 267 ~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
++..+..- .-. .....-+|||||+|++++|+|+.- -.+|+++.+.
T Consensus 170 ~~~~~~~~-~~~-------~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 170 TVSTFAWE-SGN-------GGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp CEEEEEEC-CCC-------SSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred EEeeeeec-CCC-------cccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 66555421 100 112346899999999999999988 8999998864
No 116
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.06 E-value=4.7e-08 Score=88.72 Aligned_cols=206 Identities=7% Similarity=0.031 Sum_probs=135.3
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCCE
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQKT 171 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~~ 171 (346)
.+.+.--.|.. ....+.|++++.++.+++ .+..|.+||+.+++.+..+.-. .......+..+++.|+ +.-.++.
T Consensus 23 ~~~~~l~~h~~--~v~~~~~s~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~ 97 (369)
T 3zwl_B 23 MKAIKLTGHER--PLTQVKYNKEGDLLFSCS--KDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCV-TGSADYS 97 (369)
T ss_dssp EEEEEEECCSS--CEEEEEECTTSCEEEEEE--SSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTTE
T ss_pred cccEEEEEeec--eEEEEEEcCCCCEEEEEe--CCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEE-EEeCCCe
Confidence 34444444633 347999999998777766 4559999999999988887643 3333322333345454 4456899
Q ss_pred EEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECCC-----CeEEEEeCCCCcEEEEEEeccCCeeee---------
Q 019103 172 GFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGS-----SMLYQIDPQTLKVIRKDIVRYKGREVR--------- 236 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs-----~~l~vIDp~T~kvi~~I~V~~~G~pv~--------- 236 (346)
+.++|..+.+.+.++... ......+++|++.++++..+ +.|.++|..+.+....+..... .++.
T Consensus 98 i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 98 IKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE-EPIHKIITHEGLD 176 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS-SCSEEEECCTTCC
T ss_pred EEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc-ceeeeccCCcCcc
Confidence 999999999999999864 23556678999999987665 8999999877654333322111 0100
Q ss_pred eceeeEee-CCEEEEEecCCCeEEEEeCCC-CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 237 NLNELEFI-KGEVWANVWQTDCIARISHED-GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 237 ~lNELE~~-~G~LyaNv~~sn~I~vID~~T-G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
.+..+.+. +|..++..-.++.|.+.|..+ ++.+..+... .....+++|+|+++.|++++. .+.|
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~-d~~i 242 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH-------------EKSISDMQFSPDLTYFITSSR-DTNS 242 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECC-------------SSCEEEEEECTTSSEEEEEET-TSEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecC-------------CCceeEEEECCCCCEEEEecC-CceE
Confidence 12234443 454444444578999999999 7888777541 124678999999887766643 4444
Q ss_pred EEEE
Q 019103 315 YEIN 318 (346)
Q Consensus 315 ~ev~ 318 (346)
+-.+
T Consensus 243 ~v~d 246 (369)
T 3zwl_B 243 FLVD 246 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.05 E-value=2.1e-08 Score=96.91 Aligned_cols=207 Identities=10% Similarity=-0.007 Sum_probs=140.3
Q ss_pred cceeEEEecCCEE-EEEcCCCCCCeEEEEECC--CCcEEEEe---ccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCC
Q 019103 106 FTQGLLYAENDTL-FESTGLYGRSSVRRVALE--TGKVEAIN---QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 106 FTqGL~~~~d~~L-yeStGlyg~s~V~~iDl~--Tgkv~~~~---~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~t 179 (346)
....+.+++|+.. +.+++ .+..|++||+. +++.+..+ ..+.......+.++++.|+.++. ++.++++|..+
T Consensus 104 ~v~~~~~s~d~~~l~~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD--SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG--GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEEC--CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCC
Confidence 3578999999964 57766 45699999999 88877766 34455444444445667776654 78999999988
Q ss_pred CcEEE----EEec-C-CCceeEEeeC---CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEE
Q 019103 180 LNKLE----EFTH-Q-MKDGWGLATD---GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWA 250 (346)
Q Consensus 180 l~~i~----ti~~-~-~peGwGLt~D---g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~Lya 250 (346)
.+... ++.. . .-....+++| ++.|+.++.++.|.++|..+.+.+.++..+.. .++ +.+.+.+|..++
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~-~~v---~~~~~sd~~~l~ 256 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK-HFV---SSICCGKDYLLL 256 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS-SCE---EEEEECSTTEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC-Cce---EEEEECCCCEEE
Confidence 77654 4432 1 2244567899 88888887788999999999888766443321 222 335555666555
Q ss_pred EecCCCeEEEEeCCCCeEEEEEECCchhhhhh------------hccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 251 NVWQTDCIARISHEDGVVLGWVLLPNLRERLV------------AAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 251 Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~------------~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
..-.++.|.+.|..+|+++..+.+......+. +..........+|++.|+++.|++++...+.|+-.+
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 55578899999999999999997632111000 000012235689999999999999986666666555
Q ss_pred E
Q 019103 319 L 319 (346)
Q Consensus 319 l 319 (346)
+
T Consensus 337 ~ 337 (450)
T 2vdu_B 337 M 337 (450)
T ss_dssp E
T ss_pred e
Confidence 5
No 118
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.04 E-value=3.1e-09 Score=105.41 Aligned_cols=149 Identities=10% Similarity=0.040 Sum_probs=108.5
Q ss_pred EEEEEEe----CCEEEEEEeeCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECCC-----CeEEEEeCCCCc
Q 019103 152 GEGLTLL----GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGS-----SMLYQIDPQTLK 221 (346)
Q Consensus 152 geGit~~----g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs-----~~l~vIDp~T~k 221 (346)
+.|++++ ++.||+++.. +.+.+||+++.++...+... .|.|.++++||+ ||++|.. ..++.+++....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 4678887 3899999987 99999999888776554432 578888999999 9999842 246667654322
Q ss_pred E-EEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEE-ECCchhhhhhhccCCCCceeeEEEE
Q 019103 222 V-IRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWV-LLPNLRERLVAAGYNGIDVLNGIAW 297 (346)
Q Consensus 222 v-i~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I-~l~~l~~~~~~~~~~~~~vlNGIA~ 297 (346)
. ...+. . ...++.+.+. +|+||++.+..+.|.+||+++|++...+ .... ...++|||+
T Consensus 219 ~~~~~~~--~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~------------~~~~~~ia~ 280 (433)
T 4hw6_A 219 TERLSLC--N----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT------------KGSNFHIVW 280 (433)
T ss_dssp CCEEEEE--E----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC------------CSSCEEEEE
T ss_pred ecccccc--c----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC------------CCCcccEEE
Confidence 1 12222 1 1233445554 6899999999999999999999984443 2211 124578999
Q ss_pred eCCCCEEEEecCCCCcEEEEEEe
Q 019103 298 DSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 298 d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+|++++|||+...-..|+++.+.
T Consensus 281 dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 281 HPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CTTSSEEEEEETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCCCCEEEEEeCC
Confidence 99999999999999999999865
No 119
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=4e-08 Score=100.75 Aligned_cols=197 Identities=9% Similarity=0.056 Sum_probs=132.5
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe----eEEEEEEeCCEEEEEEee-----CCEEEEEEC
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~----FgeGit~~g~~LY~ltw~-----~~~v~V~D~ 177 (346)
..|+++. ++++|+++. +..|..+|++||+++-+..++... ....-.+.++++|+.+.. ++.++.+|+
T Consensus 108 ~~~~~~~-~~~v~v~~~---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~ 183 (571)
T 2ad6_A 108 DRGLAYG-AGQIVKKQA---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDL 183 (571)
T ss_dssp CCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEET
T ss_pred ccccEEE-CCEEEEEeC---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEEC
Confidence 3577876 689999975 459999999999999888775421 111123468999998764 789999999
Q ss_pred CCCcEEEEEecCCCc----------------------------------------eeEEeeCCCEEEEECCC--------
Q 019103 178 NNLNKLEEFTHQMKD----------------------------------------GWGLATDGKVLFGSDGS-------- 209 (346)
Q Consensus 178 ~tl~~i~ti~~~~pe----------------------------------------GwGLt~Dg~~LyvSdGs-------- 209 (346)
+|++++-+++...+. ...++++.+.+|+..+.
T Consensus 184 ~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~ 263 (571)
T 2ad6_A 184 KTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETM 263 (571)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred CCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCc
Confidence 999999998864211 12355567899997642
Q ss_pred --------CeEEEEeCCCCcEEEEEEeccC--------CeeeeeceeeEe-eCCE---EEEEecCCCeEEEEeCCCCeEE
Q 019103 210 --------SMLYQIDPQTLKVIRKDIVRYK--------GREVRNLNELEF-IKGE---VWANVWQTDCIARISHEDGVVL 269 (346)
Q Consensus 210 --------~~l~vIDp~T~kvi~~I~V~~~--------G~pv~~lNELE~-~~G~---LyaNv~~sn~I~vID~~TG~Vv 269 (346)
+.|+.+|++|++++=+.+...+ ..|+- .+. .+|+ +++..-....+.+||++||+++
T Consensus 264 ~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l----~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 264 RPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL----TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp SCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE----EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE----EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 3699999999999988876421 12221 111 3673 4443334678999999999999
Q ss_pred EEEECCc-h-----------hhhh-hh-------------ccCCCCceeeEEEEeCCCCEEEEecCCC
Q 019103 270 GWVLLPN-L-----------RERL-VA-------------AGYNGIDVLNGIAWDSNRNRIFVTGKLW 311 (346)
Q Consensus 270 ~~I~l~~-l-----------~~~~-~~-------------~~~~~~~vlNGIA~d~~~~~LfVTGK~W 311 (346)
..+.+.. . ++.. .+ .+...+.-..++||||+++++||....+
T Consensus 340 w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 407 (571)
T 2ad6_A 340 VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHI 407 (571)
T ss_dssp EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECE
T ss_pred eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhc
Confidence 9987743 1 0000 00 0000111236799999999999986543
No 120
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.2e-08 Score=91.62 Aligned_cols=203 Identities=9% Similarity=0.013 Sum_probs=139.9
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCee--------------EEEEEEeC
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYF--------------GEGLTLLG 159 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~F--------------geGit~~g 159 (346)
+.+..+.. .......+.+++++.++.+++ .+..|.+||+.+++.+..+......- ...+...+
T Consensus 140 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (425)
T 1r5m_A 140 ALLNVLNF-HRAPIVSVKWNKDGTHIISMD--VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216 (425)
T ss_dssp CEEEEECC-CCSCEEEEEECTTSSEEEEEE--TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred CeeeeccC-CCccEEEEEECCCCCEEEEEe--cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence 34455542 233347999999987666666 45699999999999988886654320 12233333
Q ss_pred CEEEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeee
Q 019103 160 EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (346)
Q Consensus 160 ~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~ 237 (346)
+..+++.-.++.+.++|..+.+.+.++... .-....+++|++.|+++..++.|.++|..+.+.+..+.-.. .++
T Consensus 217 ~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~i-- 292 (425)
T 1r5m_A 217 DDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHS--QSI-- 292 (425)
T ss_dssp TTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCS--SCE--
T ss_pred CCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCC--ccE--
Confidence 334555566799999999999988888642 12445678899999888888899999999988776664322 222
Q ss_pred ceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 238 LNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 238 lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
..+.+. +| .++..-.++.|.+.|..+++.+..+... ......++|+|+++.|++++. .+.|+-
T Consensus 293 -~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~s~~~~~l~~~~~-dg~i~i 356 (425)
T 1r5m_A 293 -VSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD-------------GVPIFAGRISQDGQKYAVAFM-DGQVNV 356 (425)
T ss_dssp -EEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT-------------TCCEEEEEECTTSSEEEEEET-TSCEEE
T ss_pred -EEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC-------------CccEEEEEEcCCCCEEEEEEC-CCeEEE
Confidence 345565 56 5555556889999999999998888541 124678999999987777654 455554
Q ss_pred EEE
Q 019103 317 INL 319 (346)
Q Consensus 317 v~l 319 (346)
.++
T Consensus 357 ~~~ 359 (425)
T 1r5m_A 357 YDL 359 (425)
T ss_dssp EEC
T ss_pred EEC
Confidence 444
No 121
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.03 E-value=1.6e-07 Score=85.31 Aligned_cols=195 Identities=12% Similarity=0.038 Sum_probs=136.3
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCCEEE
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~~v~ 173 (346)
.+.++.. .......+.+++++.++.+.+ .+..|++||+.+++.+..+.....+ -..++... +.++++.-.++.+.
T Consensus 99 ~~~~~~~-~~~~v~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 99 CLKTLKG-HSNYVFCCNFNPQSNLIVSGS--FDESVRIWDVKTGKCLKTLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp EEEEEEC-CSSCEEEEEECSSSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEcC-CCCCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCEEEEEecCCCCc-EEEEEEcCCCCEEEEEeCCCcEE
Confidence 4455542 234457899999888777777 4569999999999988877654332 22344432 33444555678999
Q ss_pred EEECCCCcEEEEEecCC---CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeece-eeEeeCCEEE
Q 019103 174 IYDQNNLNKLEEFTHQM---KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLN-ELEFIKGEVW 249 (346)
Q Consensus 174 V~D~~tl~~i~ti~~~~---peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lN-ELE~~~G~Ly 249 (346)
++|..+.+.+.++.... -....+++|++.|+++..++.|.++|..+.+.+..+.-... ....+. .....++..+
T Consensus 175 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 175 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN--EKYCIFANFSVTGGKWI 252 (312)
T ss_dssp EEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCC--SSSCCCEEEECSSSCEE
T ss_pred EEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCC--ceEEEEEEEEeCCCcEE
Confidence 99999999988875431 12345788999999988889999999999988776654322 111111 1222467777
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
+..-.++.|.+.|.++++++..+.- -.+....+|++|+++.+..++
T Consensus 253 ~sg~~dg~i~vwd~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTKEIVQKLQG-------------HTDVVISTACHPTENIIASAA 298 (312)
T ss_dssp EECCTTSCEEEEETTTCCEEEEECC-------------CSSCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCEEEEEECCCchhhhhhhc-------------cCCcEEEEeecCcCCceEEEE
Confidence 7776788999999999999888732 123567899999999888775
No 122
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=9.8e-08 Score=89.81 Aligned_cols=181 Identities=11% Similarity=0.080 Sum_probs=126.4
Q ss_pred EEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe----------eEEEEEEeCCEEEEEEeeCCEEEEEECCCC
Q 019103 111 LYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----------FGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 111 ~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~----------FgeGit~~g~~LY~ltw~~~~v~V~D~~tl 180 (346)
.+. ++.+|+++. ...|..+|+++|+++-+...+... ......+.++.+|+.+. ++.++.+|++++
T Consensus 185 ~~~-~~~v~~g~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g~l~~~d~~tG 259 (376)
T 3q7m_A 185 TTA-FGAAVVGGD---NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NGNLTALDLRSG 259 (376)
T ss_dssp EEE-TTEEEECCT---TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TSCEEEEETTTC
T ss_pred EEE-CCEEEEEcC---CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-CcEEEEEECCCC
Confidence 444 578888754 358999999999998877654211 01122346899999874 678999999999
Q ss_pred cEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEE
Q 019103 181 NKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIAR 260 (346)
Q Consensus 181 ~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~v 260 (346)
+++.+.+.+ ...++..+++.+|+.+.++.|+.+|++|++++-+...... .. .......+++||+... ...|.+
T Consensus 260 ~~~w~~~~~--~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~---~~~~~~~~~~l~v~~~-~g~l~~ 332 (376)
T 3q7m_A 260 QIMWKRELG--SVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH-RL---LTSPVLYNGNLVVGDS-EGYLHW 332 (376)
T ss_dssp CEEEEECCC--CEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTT-SC---CCCCEEETTEEEEECT-TSEEEE
T ss_pred cEEeeccCC--CCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCC-Cc---ccCCEEECCEEEEEeC-CCeEEE
Confidence 999888764 3345667799999988888999999999998766552111 11 1123356899998864 678999
Q ss_pred EeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 261 ISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 261 ID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
+|++||+++....+.+- .+....+.. +++|||.... +.||.++
T Consensus 333 ~d~~tG~~~~~~~~~~~------------~~~~~~~~~--~~~l~v~~~~-G~l~~~~ 375 (376)
T 3q7m_A 333 INVEDGRFVAQQKVDSS------------GFQTEPVAA--DGKLLIQAKD-GTVYSIT 375 (376)
T ss_dssp EETTTCCEEEEEECCTT------------CBCSCCEEE--TTEEEEEBTT-SCEEEEE
T ss_pred EECCCCcEEEEEecCCC------------cceeCCEEE--CCEEEEEeCC-CEEEEEe
Confidence 99999999998876210 011122232 5688887654 6777664
No 123
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.02 E-value=8.9e-09 Score=97.45 Aligned_cols=194 Identities=13% Similarity=0.087 Sum_probs=136.0
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
.....+.|++|++++++.+ .+..|++||..+++.+..+.... ......+...++.++++.-.++.+.++|..+.+.+
T Consensus 140 ~~V~~v~~spdg~~l~sgs--~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~ 217 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGG--KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA 217 (357)
T ss_dssp SCEEEEEECSSSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred CCEEEEEECCCCCEEEEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee
Confidence 3447899999998888877 45699999999999988876533 33332233345567777788999999999999888
Q ss_pred EEEecCC----CceeEEeeCCCEEE-EECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C-CEEEEEecCCC
Q 019103 184 EEFTHQM----KDGWGLATDGKVLF-GSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K-GEVWANVWQTD 256 (346)
Q Consensus 184 ~ti~~~~----peGwGLt~Dg~~Ly-vSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~-G~LyaNv~~sn 256 (346)
..+.... .....++|+++.++ +...+..|.++|.++.+.+.++.... .+ ++.+.+. + +++.|+.-.+.
T Consensus 218 ~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~--~~---v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 218 TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS--QN---ITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS--SC---EEEEEECSSSSCCEEEEETTS
T ss_pred eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc--ee---EEEEEEcCCCCCEEEEEeCCC
Confidence 8776431 22344567766554 45668899999999999887776533 23 2346554 4 46677766788
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+|.+-|.++++++..+. + .+..++|||+|....+++||-...+|+-=.+
T Consensus 293 ~i~iwd~~~~~~~~~~~----------H----~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 293 TVAVLDADFSEVFRDLS----------H----RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHL 341 (357)
T ss_dssp CEEEECTTSCEEEEECC----------C----SSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred EEEEEECCCCcEeEECC----------C----CCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC
Confidence 99999999999876541 1 1246899999954555667666676654443
No 124
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.02 E-value=3.3e-07 Score=86.96 Aligned_cols=202 Identities=11% Similarity=0.046 Sum_probs=141.7
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEE
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFI 174 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V 174 (346)
.+..+..........+.+++++.++.+++ .+..|.+||+.+++.+..+.-.... -..++..++.+ ++...++.+.+
T Consensus 125 ~~~~~~~~~~~~v~~v~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~l-~~~~~dg~i~i 200 (401)
T 4aez_A 125 VSALAETDESTYVASVKWSHDGSFLSVGL--GNGLVDIYDVESQTKLRTMAGHQAR-VGCLSWNRHVL-SSGSRSGAIHH 200 (401)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSC-EEEEEEETTEE-EEEETTSEEEE
T ss_pred EeEeeecCCCCCEEEEEECCCCCEEEEEC--CCCeEEEEECcCCeEEEEecCCCCc-eEEEEECCCEE-EEEcCCCCEEE
Confidence 34444443344557999999887665655 4569999999999988887643322 23466666644 44556799999
Q ss_pred EECC-CCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEE
Q 019103 175 YDQN-NLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVW 249 (346)
Q Consensus 175 ~D~~-tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~Ly 249 (346)
+|.. ..+.+.++... .-.+..+++|++.|+++..++.|.++|..+.+.+.++.-.. .++ ..+.+. ++.++
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--~~v---~~~~~~p~~~~ll 275 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN--AAV---KAVAWCPWQSNLL 275 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS--SCC---CEEEECTTSTTEE
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc--ceE---EEEEECCCCCCEE
Confidence 9998 45666666532 22445577899999988778899999999988877664322 222 345555 34677
Q ss_pred EEec--CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe-cCCCCcEEEEEE
Q 019103 250 ANVW--QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT-GKLWPKLYEINL 319 (346)
Q Consensus 250 aNv~--~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT-GK~Wp~l~ev~l 319 (346)
+... .++.|.+.|..+++.+..++.. ...+.++|+|+++.++++ |-..+.++-.++
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTVDAG--------------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEEECS--------------SCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred EEecCCCCCEEEEEECCCCCEEEEEeCC--------------CcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 7654 5889999999999999888541 136889999999999988 445555555444
No 125
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.01 E-value=1.9e-07 Score=86.96 Aligned_cols=187 Identities=11% Similarity=0.019 Sum_probs=135.6
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEE 185 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~t 185 (346)
...+.+++++.++.+++ .+..|++||+.+++.+..+.... ......+.++++.|. +.-.++.+.++|.++.+...+
T Consensus 83 v~~~~~~~~~~~l~s~s--~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 83 VVSVDISHTLPIAASSS--LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYS 159 (321)
T ss_dssp EEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEE
T ss_pred EEEEEECCCCCEEEEEe--CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEE
Confidence 46889998888888877 45699999999999888876543 333333444555544 445679999999999999888
Q ss_pred EecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEe
Q 019103 186 FTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARIS 262 (346)
Q Consensus 186 i~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID 262 (346)
+... .-....++|||+.|.....++.|.++|.++.+.+.++.-.. .+ ++.+.+. +|.++|..-.+..|.+.|
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~--~~---v~~l~~spd~~~l~s~s~dg~i~iwd 234 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA--MP---IRSLTFSPDSQLLVTASDDGYIKIYD 234 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SC---CCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC--Cc---eeEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 8753 12455678999999988778899999999999887765322 23 3346665 567777776788999999
Q ss_pred CCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 263 HEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 263 ~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
..+++.+.++.-. ......++|+|+++.|+.++ ...++.
T Consensus 235 ~~~~~~~~~~~~h-------------~~~v~~~~~sp~~~~l~s~s-~D~~v~ 273 (321)
T 3ow8_A 235 VQHANLAGTLSGH-------------ASWVLNVAFCPDDTHFVSSS-SDKSVK 273 (321)
T ss_dssp TTTCCEEEEECCC-------------SSCEEEEEECTTSSEEEEEE-TTSCEE
T ss_pred CCCcceeEEEcCC-------------CCceEEEEECCCCCEEEEEe-CCCcEE
Confidence 9999988776321 12457899999988766554 444443
No 126
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.00 E-value=1.2e-08 Score=97.04 Aligned_cols=189 Identities=9% Similarity=0.033 Sum_probs=127.4
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc---C--CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCc
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM---E--GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~--~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
...+.|++|++|..+ + .+..|++||+++++.+..... + .......+..+++.|. +.-.++.+.++|.++.+
T Consensus 85 v~~~~~s~d~~l~~~-s--~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~-sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 85 VADLTWVGERGILVA-S--DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAV-SGSKDICIKVWDLAQQV 160 (344)
T ss_dssp EEEEEEETTTEEEEE-E--TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTE
T ss_pred EEEEEEeCCCeEEEE-E--CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEE-EEeCCCeEEEEECCCCc
Confidence 367899998887655 4 356999999999975443321 2 2333333333455444 44567899999999999
Q ss_pred EEEEEecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCC
Q 019103 182 KLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTD 256 (346)
Q Consensus 182 ~i~ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn 256 (346)
.+.++.-. .-....+++|++.+++|- .+++|.++|.++.+...++.....+..+ +-+.+. +++++|.--.+.
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLP---TSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCE---EEEEECSSCTTEEEEEETTS
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccc---eeeeecCCCCcceEEeccCC
Confidence 99998732 113345678887766654 5789999999999988877654433322 234444 567777766788
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
.|.+.|.++++.+.++.-. ....+.|+|+|++.++++||-...+|+
T Consensus 238 ~v~~wd~~~~~~~~~~~~h-------------~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVH-------------SQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp EEEEEESCC--CCEEEECC-------------SSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred cEEEEECCCCcEEEEEcCC-------------CCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 9999999999988877431 124588999999988888876666554
No 127
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.99 E-value=1e-07 Score=90.59 Aligned_cols=199 Identities=11% Similarity=0.042 Sum_probs=132.3
Q ss_pred CCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCC
Q 019103 102 DPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 102 d~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl 180 (346)
+...+...++|+|||+ |.+++|. .+..|++||+.+++.+..+..........++++|+.|.... ++.+.+++..+.
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~-~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~ 207 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSK-VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTG 207 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESC-SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTC
T ss_pred CcccCEEEEEEcCCCCEEEEEECC-CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc--ceeEEEEEeccC
Confidence 3456678899999996 4555552 45799999999999988887666655544555566555444 677888898888
Q ss_pred cEEEEEecC-C---CceeEEeeCCCEEEEE--CCCC--eEEEEeCCCCcEE--EEEEeccCCeeeeeceeeEee-CCEEE
Q 019103 181 NKLEEFTHQ-M---KDGWGLATDGKVLFGS--DGSS--MLYQIDPQTLKVI--RKDIVRYKGREVRNLNELEFI-KGEVW 249 (346)
Q Consensus 181 ~~i~ti~~~-~---peGwGLt~Dg~~LyvS--dGs~--~l~vIDp~T~kvi--~~I~V~~~G~pv~~lNELE~~-~G~Ly 249 (346)
+.+.+.... . -....++|||+.++.+ |++. .+..+|..+.+.. ....+..+..++ +-+.+- ||++.
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V---~~~~~Spdg~~l 284 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGI---TSMDVDMKGELA 284 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCE---EEEEECTTSCEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCe---EeEEECCCCCce
Confidence 877654432 1 1234578999998874 3332 5777776655432 222332222232 345554 67777
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
|.--.++.|.+.|.++++++.++.- . + ....+++||+|+++.| +||-...+|.-.+|
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~-----g---H----~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~i 341 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQ-----A---H----SFAITEVTISPDSTYV-ASVSAANTIHIIKL 341 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETT-----S---S----SSCEEEEEECTTSCEE-EEEETTSEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCcEEEEecC-----c---c----cCCEEEEEECCCCCEE-EEEeCCCeEEEEEc
Confidence 7766788999999999999888721 0 1 1246889999998755 66667777655554
No 128
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.98 E-value=9.1e-08 Score=88.88 Aligned_cols=208 Identities=10% Similarity=-0.054 Sum_probs=134.4
Q ss_pred CcceeEEEe----cCCEE-EEEcCCCCCCeEEEEECCC------CcEEE-----Eec--------cCCCeeEEEEEEeCC
Q 019103 105 AFTQGLLYA----ENDTL-FESTGLYGRSSVRRVALET------GKVEA-----INQ--------MEGSYFGEGLTLLGE 160 (346)
Q Consensus 105 ~FTqGL~~~----~d~~L-yeStGlyg~s~V~~iDl~T------gkv~~-----~~~--------l~~~~FgeGit~~g~ 160 (346)
.....+.++ +++.. +.+++ .+..|.+||+.+ ++.+. .+. -.... ..++...+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~ 197 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATD--VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA--TSVDISER 197 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEE--TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCC--CEEEECTT
T ss_pred CcEEEEEEeeccCCCCceEEEEEe--CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCc--eEEEECCC
Confidence 445799999 88876 76666 456999999998 65443 332 12222 33455432
Q ss_pred EEEEEEeeCCEEEEEECCCCcEEEEEec-------C-CCceeEEeeCCCEEEEECCC---CeEEEEeCCCCcEEEEEEec
Q 019103 161 KLFQVTWLQKTGFIYDQNNLNKLEEFTH-------Q-MKDGWGLATDGKVLFGSDGS---SMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 161 ~LY~ltw~~~~v~V~D~~tl~~i~ti~~-------~-~peGwGLt~Dg~~LyvSdGs---~~l~vIDp~T~kvi~~I~V~ 229 (346)
.++++.-.++.+.++|..+.+.+.++.. . ......+++|++.|+++..+ +.|.++|..+.+.+.++...
T Consensus 198 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~ 277 (397)
T 1sq9_A 198 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVP 277 (397)
T ss_dssp SEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC
T ss_pred ceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccC
Confidence 2555566789999999999999999875 3 12445577899999887666 89999999999988877651
Q ss_pred c-----------CCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhh---hhccCC-----CC
Q 019103 230 Y-----------KGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERL---VAAGYN-----GI 289 (346)
Q Consensus 230 ~-----------~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~---~~~~~~-----~~ 289 (346)
. +.. .++.+.+. +|..++....++.|.+.|..+++.+..+....-.... ...+.. -.
T Consensus 278 ~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 354 (397)
T 1sq9_A 278 THSSQASLGEFAHSS---WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE 354 (397)
T ss_dssp --------CCBSBSS---CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred cccccccccccccCC---cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC
Confidence 1 111 23345565 5655555556889999999999999999742100000 000000 03
Q ss_pred ceeeEEEEeCCCC---------EEEEecCCCCcEEEEEE
Q 019103 290 DVLNGIAWDSNRN---------RIFVTGKLWPKLYEINL 319 (346)
Q Consensus 290 ~vlNGIA~d~~~~---------~LfVTGK~Wp~l~ev~l 319 (346)
...++++|+|+++ .+++||-..+.|.--++
T Consensus 355 ~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 355 PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred CceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 4678999999984 56666666666654443
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.98 E-value=3.8e-08 Score=95.47 Aligned_cols=191 Identities=14% Similarity=0.071 Sum_probs=124.4
Q ss_pred ceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee--CCEEEEEECCCCcEE
Q 019103 107 TQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL--QKTGFIYDQNNLNKL 183 (346)
Q Consensus 107 TqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~--~~~v~V~D~~tl~~i 183 (346)
...+.++|||+ |+.++...+...|.+||+++|+.......+.......++++|++|+.+... ...++++|.++.+..
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~ 260 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR 260 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE
Confidence 46899999995 444433234579999999999986554455555555556677878766544 356999999988763
Q ss_pred EEEe-cC-CCceeEEeeCCCEEEE-EC--CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecC--
Q 019103 184 EEFT-HQ-MKDGWGLATDGKVLFG-SD--GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ-- 254 (346)
Q Consensus 184 ~ti~-~~-~peGwGLt~Dg~~Lyv-Sd--Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~-- 254 (346)
++. .. ......++|||++|+. ++ |..+|+++|..+.+.. + +...+..+ ..+.+. || +|+.....
T Consensus 261 -~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~--l~~~~~~~---~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 261 -QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-R--ITWEGSQN---QDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp -ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-E--CCCSSSEE---EEEEECTTSSEEEEEEECSS
T ss_pred -eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-E--EecCCCcc---cCeEECCCCCEEEEEECcCC
Confidence 333 22 1234457899998765 54 3559999999988743 2 22222222 234443 44 56655443
Q ss_pred CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC--cEEEEEE
Q 019103 255 TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP--KLYEINL 319 (346)
Q Consensus 255 sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp--~l~ev~l 319 (346)
...|.++|++++++. .+. . ......++|+|+++.|+.++..-. .||.+.+
T Consensus 334 ~~~i~~~d~~~~~~~-~l~--~------------~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQ-VLS--S------------TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CEEEEEEETTTCCEE-ECC--C------------SSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ceEEEEEECCCCCEE-Eec--C------------CCCcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 358999999999873 221 1 013577999999999888775544 6777765
No 130
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.97 E-value=1e-07 Score=89.39 Aligned_cols=198 Identities=12% Similarity=-0.025 Sum_probs=134.7
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEec-cCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ-MEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~-l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
.-..+++++.++.+.+ .+..|++||+.+++...... -........+..+++.|+ +.-.++.+.++|..+.+.+.++
T Consensus 101 ~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGT--TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALI-SSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEEECSSSCEEEEEE--TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCCCEEE
T ss_pred EEEEEecCCCEEEEEE--CCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEE-EEeCCCeEEEEeCCCCcCceEE
Confidence 3445677887776666 45699999999998877653 233333333333445444 4456799999999999999988
Q ss_pred ecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC-Ceeee------------------eceeeEee-
Q 019103 187 THQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK-GREVR------------------NLNELEFI- 244 (346)
Q Consensus 187 ~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~-G~pv~------------------~lNELE~~- 244 (346)
... .-....+++|++.|+.+..++.|.++|.++.+.+.++..... ..++. .++.+.+.
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 732 224456788999999887788999999999998888765321 11111 11112222
Q ss_pred CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 245 KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 245 ~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+|...+..-.++.|.+.|..+++.+..+.. . .....+.++|+|+++.+++||-..+.|+--.+.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-----------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPS-K-----------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECC-T-----------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEccc-c-----------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 566666665688899999999998877733 1 123568899999999666666666777666553
No 131
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.97 E-value=3.9e-08 Score=96.57 Aligned_cols=178 Identities=14% Similarity=0.107 Sum_probs=119.7
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe------CC---EEEEEEee--CCEEEEE--ECCCCcEE
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL------GE---KLFQVTWL--QKTGFIY--DQNNLNKL 183 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~------g~---~LY~ltw~--~~~v~V~--D~~tl~~i 183 (346)
.++++|- +...|.+||+ +|++++.++.+ ++ .++.+. |+ .+|+++-. ++++.+| |+++.+ +
T Consensus 41 s~ii~t~--k~~gL~Vydl-~G~~l~~~~~g-~~--nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 41 SKLITTN--KKSGLVVYSL-DGKMLHSYNTG-KL--NNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp CEEEEEE--TTTEEEEEET-TSCEEEEECCS-CE--EEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred cEEEEEc--CCCCEEEEcC-CCcEEEEccCC-Cc--ccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 5788876 4569999999 99999998763 32 333432 22 46777777 7999888 655543 4
Q ss_pred EEE-----e--cC--CCceeEE--eeCCC--EEEEECCCCeEEEEeC-------CCCcEEEEEEeccCCeeeeeceeeEe
Q 019103 184 EEF-----T--HQ--MKDGWGL--ATDGK--VLFGSDGSSMLYQIDP-------QTLKVIRKDIVRYKGREVRNLNELEF 243 (346)
Q Consensus 184 ~ti-----~--~~--~peGwGL--t~Dg~--~LyvSdGs~~l~vIDp-------~T~kvi~~I~V~~~G~pv~~lNELE~ 243 (346)
+.+ + .+ .|+|..+ +++++ ++|+++.+..+.+++. .+.++++++.++. ++-. +-+
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs--q~Eg----cvv 187 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS--QTEG----MAA 187 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS--CEEE----EEE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC--Ccce----EEE
Confidence 444 4 22 3566666 44433 6899997777777554 3457788888864 2311 334
Q ss_pred e--CCEEEEEecCCCeEEEEeCC-----CCeEEEEEECCchhhhhhhccCCCCceeeEEEEe--CCCC-EEEEecCCCCc
Q 019103 244 I--KGEVWANVWQTDCIARISHE-----DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWD--SNRN-RIFVTGKLWPK 313 (346)
Q Consensus 244 ~--~G~LyaNv~~sn~I~vID~~-----TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d--~~~~-~LfVTGK~Wp~ 313 (346)
+ .|+||++.+.. -|.+||.+ +++++..+....|.. -+.|||+. ++++ .|||+.+.-++
T Consensus 188 Dd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g~l~a-----------DvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 188 DDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTR-----------DIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp ETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSSSBCS-----------CEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCCcccc-----------CcceEEEEecCCCCEEEEEEcCCCCE
Confidence 3 48999999974 49999955 588888875544431 36899995 4455 79999988887
Q ss_pred EEEEEE
Q 019103 314 LYEINL 319 (346)
Q Consensus 314 l~ev~l 319 (346)
+.-.+.
T Consensus 256 ~~Vydr 261 (355)
T 3amr_A 256 YAIYDR 261 (355)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 776665
No 132
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.97 E-value=9.8e-08 Score=89.81 Aligned_cols=178 Identities=8% Similarity=0.004 Sum_probs=124.0
Q ss_pred eeeEEEEEEecCCC----CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC---------CCeeEEEEEE
Q 019103 91 YTIQVVNEFPHDPR----AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME---------GSYFGEGLTL 157 (346)
Q Consensus 91 ~t~~Vv~t~phd~~----~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~---------~~~FgeGit~ 157 (346)
.+.+++=+++.+.. .+.....+. ++++|+++. +..|..+|++||+++-+..++ ...+..+.+.
T Consensus 26 ~~~~~~W~~~~~~~~~~~~~~~~p~v~-~~~v~~~~~---~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 101 (376)
T 3q7m_A 26 FTPTTAWSTSVGSGIGNFYSNLHPALA-DNVVYAADR---AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV 101 (376)
T ss_dssp SCCEEEEEECCTTTTTTSCCCCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE
T ss_pred CcceEEeEEecCCCccccceeeccEEE-CCEEEEEcC---CCeEEEEEccCCceeeeecCccccccccccCcccccCceE
Confidence 34566666655321 111234554 689999875 349999999999998887774 2345566788
Q ss_pred eCCEEEEEEeeCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeee
Q 019103 158 LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (346)
Q Consensus 158 ~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~ 237 (346)
.++++|+.+. ++.++.+|++|++++-+++.+.........+++.+|+...++.|+.+|++|++++-+............
T Consensus 102 ~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSE-KAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEET-TSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcC-CCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 8999999885 588999999999999988864211111223467899987788999999999999887776432110000
Q ss_pred ceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEEC
Q 019103 238 LNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 238 lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
.......+|.||+... ...|..+|++||+++-....
T Consensus 181 ~~~~~~~~~~v~~g~~-~g~l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 181 ESAPTTAFGAAVVGGD-NGRVSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp CCCCEEETTEEEECCT-TTEEEEEETTTCCEEEEEEC
T ss_pred CCCcEEECCEEEEEcC-CCEEEEEECCCCcEEEEEec
Confidence 1123355889998653 67899999999999877765
No 133
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=5.4e-08 Score=91.25 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=108.1
Q ss_pred CeeEEEEEEeC--CEEEEEEeeCCEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEE
Q 019103 149 SYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRK 225 (346)
Q Consensus 149 ~~FgeGit~~g--~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~ 225 (346)
..++||.+.+. +.+|.++...+.++++|+++.+. ..+..+ .+.+..+++||+.++.+ .+.|+++|+++.++..-
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLH 124 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEE
T ss_pred CCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEE
Confidence 35789999975 78999999999999999988754 344443 34566677887755544 34599999999886533
Q ss_pred EEeccCCeeeeeceeeEee-CCEEEEEecC------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEe
Q 019103 226 DIVRYKGREVRNLNELEFI-KGEVWANVWQ------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWD 298 (346)
Q Consensus 226 I~V~~~G~pv~~lNELE~~-~G~LyaNv~~------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d 298 (346)
... ..+.+...+|.+.+. +|++|+.... ...|.++| +|++..... . ...+|||+++
T Consensus 125 ~~~-~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~------------~~~~~~i~~s 187 (326)
T 2ghs_A 125 AEL-ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--D------------ISIPNSICFS 187 (326)
T ss_dssp ECS-STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--E------------ESSEEEEEEC
T ss_pred eeC-CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--C------------CcccCCeEEc
Confidence 222 122333456777666 6889987653 35799999 687654321 1 1257999999
Q ss_pred CCCCEEEEecCCCCcEEEEEEe
Q 019103 299 SNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 299 ~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
|+++.+|+++..-..|+.+.+.
T Consensus 188 ~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 188 PDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp TTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCCEEEEEECCCCEEEEEEcc
Confidence 9999999998877889888764
No 134
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.94 E-value=5e-07 Score=86.55 Aligned_cols=185 Identities=14% Similarity=0.022 Sum_probs=126.1
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEe
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFT 187 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~ 187 (346)
..+.+ ++..+.+++ .+..|++||+.+++.+..+...... ...+..+++.++.. -.++.+.++|..+.+.+.++.
T Consensus 243 ~~~~~--~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 243 RCVQY--DGRRVVSGA--YDFMVKVWDPETETCLHTLQGHTNR-VYSLQFDGIHVVSG-SLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp EEEEE--CSSCEEEEE--TTSCEEEEEGGGTEEEEEECCCSSC-EEEEEECSSEEEEE-ETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEE--CCCEEEEEc--CCCEEEEEECCCCcEeEEecCCCCc-eEEEEECCCEEEEE-eCCCeEEEEECCCCCEEEEEc
Confidence 45666 344444444 3458888888888877776533222 34456656655544 457899999999999999987
Q ss_pred cCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEecc-CCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCC
Q 019103 188 HQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFIKGEVWANVWQTDCIARISHEDG 266 (346)
Q Consensus 188 ~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~-~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG 266 (346)
.....-..++++++.|++...++.|.++|..+.+.+.++.... +..+ ++.+.+.+..|+ ..-.++.|.+.|..+|
T Consensus 317 ~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~l~-s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 317 GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA---VTCLQFNKNFVI-TSSDDGTVKLWDLKTG 392 (445)
T ss_dssp CCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC---EEEEEECSSEEE-EEETTSEEEEEETTTC
T ss_pred CCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCC---EEEEEECCCEEE-EEeCCCeEEEEECCCC
Confidence 5434555688889988887778899999999999888776532 2222 234656444444 4446889999999999
Q ss_pred eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 267 VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 267 ~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
+.+..+...... ......++++|+|++..+.+.+.+
T Consensus 393 ~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~la~~~~d 428 (445)
T 2ovr_B 393 EFIRNLVTLESG--------GSGGVVWRIRASNTKLVCAVGSRN 428 (445)
T ss_dssp CEEEEEEECTTG--------GGTCEEEEEEECSSEEEEEEECSS
T ss_pred ceeeeeeccccC--------CCCceEEEEEecCCEEEEEEcccC
Confidence 999888431111 113467899999987666655544
No 135
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.94 E-value=2.3e-07 Score=84.92 Aligned_cols=203 Identities=8% Similarity=-0.045 Sum_probs=130.7
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc---CCCeeEEEEEEeCCEEEEEEeeCC
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM---EGSYFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~~~~FgeGit~~g~~LY~ltw~~~ 170 (346)
+.+.+++.. ......+.+++++.++.+++ .+..|++||+.+++......+ ........+..+++.|+... .++
T Consensus 43 ~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~ 118 (372)
T 1k8k_C 43 VQVHELKEH-NGQVTGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSR 118 (372)
T ss_dssp EEEEEEECC-SSCEEEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTS
T ss_pred EeeeeecCC-CCcccEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCC
Confidence 366666532 23347999999987777766 456999999999987666543 22333322333445555544 578
Q ss_pred EEEEEECCCCcE---EEEEecC---CCceeEEeeCCCEEEEECCCCeEEEEeCC------------------CCcEEEEE
Q 019103 171 TGFIYDQNNLNK---LEEFTHQ---MKDGWGLATDGKVLFGSDGSSMLYQIDPQ------------------TLKVIRKD 226 (346)
Q Consensus 171 ~v~V~D~~tl~~---i~ti~~~---~peGwGLt~Dg~~LyvSdGs~~l~vIDp~------------------T~kvi~~I 226 (346)
.+.++|.++.+. ...+..+ .-....+++|++.|+++..++.|.++|.. +.+.+.++
T Consensus 119 ~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 119 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 899988887663 3444322 12445577899999888778899999953 55666555
Q ss_pred EeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEE
Q 019103 227 IVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIF 305 (346)
Q Consensus 227 ~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~Lf 305 (346)
.... .+ ++.+.+. +|..++....++.|.+.|..+++.+..+... ....+.++|+|+++.+.
T Consensus 199 ~~~~--~~---v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~ 260 (372)
T 1k8k_C 199 SSSC--GW---VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE-------------TLPLLAVTFITESSLVA 260 (372)
T ss_dssp CCCS--SC---EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS-------------SCCEEEEEEEETTEEEE
T ss_pred CCCC--Ce---EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC-------------CCCeEEEEEecCCCEEE
Confidence 4221 22 2345554 5544444456889999999999999888541 12468899999876544
Q ss_pred EecCCCCcEEEEEEe
Q 019103 306 VTGKLWPKLYEINLR 320 (346)
Q Consensus 306 VTGK~Wp~l~ev~l~ 320 (346)
+| ..+.++-.++.
T Consensus 261 -~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 261 -AG-HDCFPVLFTYD 273 (372)
T ss_dssp -EE-TTSSCEEEEEE
T ss_pred -EE-eCCeEEEEEcc
Confidence 55 45555444443
No 136
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.90 E-value=3.7e-07 Score=82.79 Aligned_cols=196 Identities=8% Similarity=0.061 Sum_probs=126.2
Q ss_pred ceeEEEecCC-EEEEEcCCC--CCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC----CEEEEEEeeCCEEEEEECCC
Q 019103 107 TQGLLYAEND-TLFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG----EKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 107 TqGL~~~~d~-~LyeStGly--g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g----~~LY~ltw~~~~v~V~D~~t 179 (346)
...+.|+|++ .++.+++ . ++..|++||+.+++.......+...--..++... +.++++.-.++.+.++|..+
T Consensus 21 v~~~~~~p~~~~l~~~~s-~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 99 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGN-FARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS
T ss_pred eEEEEEcCCCceEEEecC-ccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC
Confidence 3699999988 4554443 3 3679999999999876655443211123344433 25555556789999999998
Q ss_pred Cc-EEEEEecCCCceeEE--------eeCCCEEEEECCCCeEEEEeCCCCc-EEEEEEeccCCeeeeeceeeEe-----e
Q 019103 180 LN-KLEEFTHQMKDGWGL--------ATDGKVLFGSDGSSMLYQIDPQTLK-VIRKDIVRYKGREVRNLNELEF-----I 244 (346)
Q Consensus 180 l~-~i~ti~~~~peGwGL--------t~Dg~~LyvSdGs~~l~vIDp~T~k-vi~~I~V~~~G~pv~~lNELE~-----~ 244 (346)
.+ .+.++......-..+ ++|++.|+.+..+..|.++|..+.+ .+..+..... ..-..++.+.+ .
T Consensus 100 ~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 100 PEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQG-ENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp CSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTT-SCCCCEEEEEEECCCC-
T ss_pred CCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCC-CCCCceEEEEEEeccCC
Confidence 88 777776321222233 6789999888888899999999877 5555544321 11112233442 3
Q ss_pred CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeC---CCCEEEEecCCCCcEEEEEE
Q 019103 245 KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDS---NRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 245 ~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~---~~~~LfVTGK~Wp~l~ev~l 319 (346)
++..++....+..|.+.|..+++.+..... ....+.++|+| +++.|++++ ..+.++-..+
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~ 241 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWETNI--------------KNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDM 241 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEEEEC--------------SSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEE
T ss_pred CCCEEEEEccCCeEEEEECccCceeeecCC--------------CCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeC
Confidence 566666555678999999999998655432 12468899999 777766654 4455555444
No 137
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.7e-07 Score=86.80 Aligned_cols=206 Identities=9% Similarity=0.007 Sum_probs=131.5
Q ss_pred eEEEEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEEC----CCCc------EEEEecc--CC---------Ce
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL----ETGK------VEAINQM--EG---------SY 150 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl----~Tgk------v~~~~~l--~~---------~~ 150 (346)
.++++...|.... ..+.|+|++. ++.+.+ .+..|++||+ .+++ ....+.. .. ..
T Consensus 36 ~~~~~~~~~~~~v--~~~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (425)
T 1r5m_A 36 VKILKEIVKLDNI--VSSTWNPLDESILAYGE--KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQV 111 (425)
T ss_dssp CEECEEEEECSCC--SEEEECSSCTTEEEEEE--TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCE
T ss_pred hhheeeeeccCce--EEEEECCCCCcEEEEec--CCceEEEEEEecccCCccccccccccccccccccccccccCCCCce
Confidence 4556666664444 6999999998 777766 4569999999 9998 3444432 11 22
Q ss_pred eEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEe
Q 019103 151 FGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (346)
Q Consensus 151 FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V 228 (346)
....+..+++.|+.. -.++.+.++| .+.+.+.++... .-....+++|++.|+++..++.|.++|..+.+.+.++..
T Consensus 112 ~~~~~s~~~~~l~~~-~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 112 TCLAWSHDGNSIVTG-VENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp EEEEECTTSSEEEEE-ETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEEEcCCCCEEEEE-eCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 232223334555444 4578999999 778888888742 224455778999999988889999999999999888776
Q ss_pred ccCCeee----------eeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEE
Q 019103 229 RYKGREV----------RNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAW 297 (346)
Q Consensus 229 ~~~G~pv----------~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~ 297 (346)
....... ..+..+.+. ++.+++ .-..+.|.+.|..+++.+..+... ....+.++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~i~~~d~~~~~~~~~~~~~-------------~~~i~~~~~ 255 (425)
T 1r5m_A 190 KETGGSSINAENHSGDGSLGVDVEWVDDDKFVI-PGPKGAIFVYQITEKTPTGKLIGH-------------HGPISVLEF 255 (425)
T ss_dssp C---------------CCCBSCCEEEETTEEEE-ECGGGCEEEEETTCSSCSEEECCC-------------SSCEEEEEE
T ss_pred cccCccceeeccccCCcceeeEEEEcCCCEEEE-EcCCCeEEEEEcCCCceeeeeccC-------------CCceEEEEE
Confidence 4421000 002335555 455444 445788999999999887776321 124688999
Q ss_pred eCCCCEEEEecCCCCcEEEEEE
Q 019103 298 DSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 298 d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+|+++.|++++ ....|+-.++
T Consensus 256 ~~~~~~l~~~~-~d~~i~i~d~ 276 (425)
T 1r5m_A 256 NDTNKLLLSAS-DDGTLRIWHG 276 (425)
T ss_dssp ETTTTEEEEEE-TTSCEEEECS
T ss_pred CCCCCEEEEEc-CCCEEEEEEC
Confidence 99998766665 4455544443
No 138
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.89 E-value=1.1e-06 Score=81.83 Aligned_cols=194 Identities=10% Similarity=0.064 Sum_probs=133.7
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCCEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTG 172 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~~v 172 (346)
++..++.. .......+.+.+++.++.+ + ++..|++||+.+++.+..+.-.... ...++... +.++++.-.++.+
T Consensus 134 ~~~~~~~~-h~~~v~~~~~~~~~~l~s~-s--~d~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 134 RVSRELAG-HTGYLSCCRFLDDNQIVTS-S--GDTTCALWDIETGQQTTTFTGHTGD-VMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp EEEEEEEC-CSSCEEEEEEEETTEEEEE-E--TTSCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTSCE
T ss_pred eeEEEecC-CCccEEEEEECCCCcEEEE-E--CCCcEEEEECCCCcEEEEEcCCCCc-eEEEEECCCCCEEEEEeCCCcE
Confidence 44555542 2334477888888886544 4 4569999999999988776533221 23345443 4466666778999
Q ss_pred EEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEE
Q 019103 173 FIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVW 249 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~Ly 249 (346)
.++|..+.+.+.++... .-....++||++.|+....+++|.++|..+.+.+.++..... ...+..+.+. +|.+.
T Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI---ICGITSVSFSKSGRLL 285 (340)
T ss_dssp EEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---CSCEEEEEECTTSSEE
T ss_pred EEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc---ccceEEEEECCCCCEE
Confidence 99999999999988642 124556788999988877788999999999887765543221 1123345554 56666
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
+....++.|.+-|..+++.+..+.-. ....+.++|+|+++.|...+
T Consensus 286 ~~g~~d~~i~vwd~~~~~~~~~~~~h-------------~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 286 LAGYDDFNCNVWDALKADRAGVLAGH-------------DNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECTTSSCEEEEE
T ss_pred EEECCCCeEEEEEcccCcEeeEeecC-------------CCcEEEEEEcCCCCEEEEEc
Confidence 66667889999999999988877421 12457899999988766554
No 139
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.89 E-value=2e-07 Score=97.32 Aligned_cols=181 Identities=13% Similarity=0.086 Sum_probs=126.5
Q ss_pred eeEEEecC-CEEEEEcCCC------------CC----CeEEEEECCCCcEEEEeccCC----------CeeEEEEEEeCC
Q 019103 108 QGLLYAEN-DTLFESTGLY------------GR----SSVRRVALETGKVEAINQMEG----------SYFGEGLTLLGE 160 (346)
Q Consensus 108 qGL~~~~d-~~LyeStGly------------g~----s~V~~iDl~Tgkv~~~~~l~~----------~~FgeGit~~g~ 160 (346)
.++.++++ +.+|++++.- |+ ++|..+|++||+++-..++.+ .+.-.+...+|+
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 36788865 4899988631 11 369999999999988876532 232333344452
Q ss_pred --EEEEEEeeCCEEEEEECCCCcEEEEEecC-CC------------------------------------ceeEEeeCCC
Q 019103 161 --KLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MK------------------------------------DGWGLATDGK 201 (346)
Q Consensus 161 --~LY~ltw~~~~v~V~D~~tl~~i~ti~~~-~p------------------------------------eGwGLt~Dg~ 201 (346)
.+++..-+++.++++|++|++++.+++.. .+ .+.+++++++
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 44445557899999999999999988753 11 1346788899
Q ss_pred EEEEE-C--------------C----------------------------CCeEEEEeCCCCcEEEEEEeccC--Ceeee
Q 019103 202 VLFGS-D--------------G----------------------------SSMLYQIDPQTLKVIRKDIVRYK--GREVR 236 (346)
Q Consensus 202 ~LyvS-d--------------G----------------------------s~~l~vIDp~T~kvi~~I~V~~~--G~pv~ 236 (346)
.+|+. + | .+.|+.||+.|++++-+++.+.. |-+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~-- 483 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGT-- 483 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCE--
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcc--
Confidence 99994 2 1 16899999999999988887541 222
Q ss_pred eceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 237 NLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 237 ~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
+...++.||+. -.++.+.++|.+||+++..+.++.-. ...| +.|..+|+.+++.
T Consensus 484 ----~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~----------~~~p--~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 484 ----LTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGTGV----------VAAP--STYMVDGRQYVSV 537 (677)
T ss_dssp ----EEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCC----------CSCC--EEEEETTEEEEEE
T ss_pred ----eEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCCCc----------ccCC--EEEEeCCEEEEEE
Confidence 44567889987 46889999999999999999874210 1122 6677777666654
No 140
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.88 E-value=1.7e-07 Score=90.04 Aligned_cols=190 Identities=15% Similarity=0.117 Sum_probs=112.3
Q ss_pred cceeEEEecC----CEEEEEcCCCCC---CeEEEEECCCCcE------EEEecc--CCCeeEEEEEEe-CCEEEEEEee-
Q 019103 106 FTQGLLYAEN----DTLFESTGLYGR---SSVRRVALETGKV------EAINQM--EGSYFGEGLTLL-GEKLFQVTWL- 168 (346)
Q Consensus 106 FTqGL~~~~d----~~LyeStGlyg~---s~V~~iDl~Tgkv------~~~~~l--~~~~FgeGit~~-g~~LY~ltw~- 168 (346)
...||++++| +.||++....+. +.|.+++.+.+++ ...++. ....++.+++.. ++.||+++..
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~ 155 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEV 155 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCT
T ss_pred CceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCC
Confidence 3479999997 689998652221 6899999886533 122331 223466778875 3589999753
Q ss_pred ------------CCEEEEEECCCC------------cEEEEEecC--CCceeEEeeCCCEEEEEC-CCCe--------EE
Q 019103 169 ------------QKTGFIYDQNNL------------NKLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSM--------LY 213 (346)
Q Consensus 169 ------------~~~v~V~D~~tl------------~~i~ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~--------l~ 213 (346)
.++|+.+|++.- .....+.++ .|.|.+++++++.||++| |.+. |.
T Consensus 156 ~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~ 235 (352)
T 2ism_A 156 YERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVN 235 (352)
T ss_dssp TCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEE
T ss_pred CCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEE
Confidence 368999998640 122234444 367777778778899998 6554 56
Q ss_pred EEeCCCCc----EEEEEEeccCCeeee------eceeeEeeCCEEEEEecCCCeEEEEeCCCCe----EEEEEECCchhh
Q 019103 214 QIDPQTLK----VIRKDIVRYKGREVR------NLNELEFIKGEVWANVWQTDCIARISHEDGV----VLGWVLLPNLRE 279 (346)
Q Consensus 214 vIDp~T~k----vi~~I~V~~~G~pv~------~lNELE~~~G~LyaNv~~sn~I~vID~~TG~----Vv~~I~l~~l~~ 279 (346)
.|.+...- ............|+. .+.-+.+.+|.+|+..+..+.|.+|+++... +...-.+ ..
T Consensus 236 ~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~---~~ 312 (352)
T 2ism_A 236 LIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA---LS 312 (352)
T ss_dssp EECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE---EE
T ss_pred EeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchhee---cc
Confidence 65543200 000000000001111 1234667799999999999999999987653 2111111 00
Q ss_pred hhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 280 RLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 280 ~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
...-|.+||++|||. |||+
T Consensus 313 --------~~~rp~~v~~~pdG~-lyv~ 331 (352)
T 2ism_A 313 --------GFGRLREVQVGPDGA-LYVT 331 (352)
T ss_dssp --------SSCCEEEEEECTTSC-EEEE
T ss_pred --------cCCCeeEEEECCCCc-EEEE
Confidence 112589999999985 5555
No 141
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.87 E-value=2.6e-07 Score=95.79 Aligned_cols=205 Identities=13% Similarity=0.119 Sum_probs=137.4
Q ss_pred ceeEEEec-CCE----EEEEcCCCCCCeEEEEECCCCcEEEEeccCCC----eeEEEEEEeCCEEEEEEe-----eCCEE
Q 019103 107 TQGLLYAE-NDT----LFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQVTW-----LQKTG 172 (346)
Q Consensus 107 TqGL~~~~-d~~----LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~----~FgeGit~~g~~LY~ltw-----~~~~v 172 (346)
..|+++.+ +++ +|+.+. +..|..+|.+||+++=+..++.. .+...-.+.++++|+.+. .++.+
T Consensus 108 ~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v 184 (599)
T 1w6s_A 108 NRGLAYWPGDGKTPALILKTQL---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYL 184 (599)
T ss_dssp CCCCEEECCCSSSCCEEEEECT---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEE
T ss_pred ccceEEEecCCcceeEEEEEcC---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeE
Confidence 46888842 456 999865 35999999999999888776541 111122446889998765 47899
Q ss_pred EEEECCCCcEEEEEecCCCc-------------------------------------ee---EEeeCCCEEEEECCC---
Q 019103 173 FIYDQNNLNKLEEFTHQMKD-------------------------------------GW---GLATDGKVLFGSDGS--- 209 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~~pe-------------------------------------Gw---GLt~Dg~~LyvSdGs--- 209 (346)
+.||++|++++-+++...+. -| .+.++.+.+|+..|+
T Consensus 185 ~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 185 TAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp EEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99999999999998864222 12 355678899997653
Q ss_pred -------------CeEEEEeCCCCcEEEEEEeccC--------CeeeeeceeeEeeCC---EEEEEecCCCeEEEEeCCC
Q 019103 210 -------------SMLYQIDPQTLKVIRKDIVRYK--------GREVRNLNELEFIKG---EVWANVWQTDCIARISHED 265 (346)
Q Consensus 210 -------------~~l~vIDp~T~kvi~~I~V~~~--------G~pv~~lNELE~~~G---~LyaNv~~sn~I~vID~~T 265 (346)
+.|+-+|++|++++=+.+...+ ..|+ +-++...+| .+++..-....+.++|.+|
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~--l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t 342 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMM--LSEQKDKDGKARKLLTHPDRNGIVYTLDRTD 342 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE--EEEEECTTSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccE--EEeccccCCcEEEEEEEECCCcEEEEEECCC
Confidence 5899999999999877776431 1121 111111356 5565555678999999999
Q ss_pred CeEEEEEECCch---------hhh---h--------------hhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 266 GVVLGWVLLPNL---------RER---L--------------VAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 266 G~Vv~~I~l~~l---------~~~---~--------------~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
|+++-...+..- ... . .-.+...+....++||||+++.+||...+++..++
T Consensus 343 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~ 419 (599)
T 1w6s_A 343 GALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWE 419 (599)
T ss_dssp CCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEE
T ss_pred CCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeee
Confidence 999988765320 000 0 00001123345789999999999998666655444
No 142
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.87 E-value=9.3e-07 Score=82.29 Aligned_cols=195 Identities=12% Similarity=0.060 Sum_probs=131.9
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc----EEEEeccCCCeeEEEEEE-eCCEEEEEEee
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTL-LGEKLFQVTWL 168 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk----v~~~~~l~~~~FgeGit~-~g~~LY~ltw~ 168 (346)
+.+.+++. .......+.|++++.++.+.+ .+..|++||+.+++ +.....-.... -..+.. .++.+ ++.-.
T Consensus 88 ~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~l-~s~s~ 162 (340)
T 1got_B 88 NKVHAIPL-RSSWVMTCAYAPSGNYVACGG--LDNICSIYNLKTREGNVRVSRELAGHTGY-LSCCRFLDDNQI-VTSSG 162 (340)
T ss_dssp CEEEEEEC-SSSCEEEEEECTTSSEEEEEE--TTCEEEEEETTTCSBSCEEEEEEECCSSC-EEEEEEEETTEE-EEEET
T ss_pred CcceEeec-CCccEEEEEECCCCCEEEEEe--CCCeEEEEECccCCCcceeEEEecCCCcc-EEEEEECCCCcE-EEEEC
Confidence 34556664 234457899999998877777 45699999998863 33332221111 222333 34554 44556
Q ss_pred CCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C
Q 019103 169 QKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (346)
Q Consensus 169 ~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~ 245 (346)
++.+.++|.++.+.+.++... .-....+++|++.++....++.|.++|..+.+.+.++.-.. .+ ++.+.+. +
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~--~~---v~~v~~~p~ 237 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE--SD---INAICFFPN 237 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS--SC---EEEEEECTT
T ss_pred CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCc--CC---EEEEEEcCC
Confidence 889999999999999988642 12344567888888877778899999999998877665422 22 3446665 5
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
|..++..-.+++|.+.|..+++.+..+.... .......++|+|+++.|++.+.
T Consensus 238 ~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 238 GNAFATGSDDATCRLFDLRADQELMTYSHDN-----------IICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCTT-----------CCSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEccCC-----------cccceEEEEECCCCCEEEEECC
Confidence 6667766678899999999999887764311 1123578999999887766553
No 143
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.87 E-value=5.8e-07 Score=84.67 Aligned_cols=186 Identities=8% Similarity=0.069 Sum_probs=128.2
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeC-CEEEEEEeeCCEEEEEECCCCcE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g-~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
.....+.|++++..+.+++ ++..|++||+.+++.+..+.-. .......+.+.. +.++++.-.++.+.++|..+.+.
T Consensus 155 ~~v~~~~~~~~~~~l~t~s--~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTAS--GDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC 232 (354)
T ss_dssp SCEEEEEECSSSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE
T ss_pred CcEEEEEEeCCCCEEEEEe--CCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 3347899998886666666 5679999999999988777543 333333333332 34555556789999999999999
Q ss_pred EEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEE
Q 019103 183 LEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIA 259 (346)
Q Consensus 183 i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~ 259 (346)
+.++... .-....++||++.|+....+++|.++|..+.+.+....-... ....+.+.+. +|.+.+....++.|.
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~l~~g~~d~~i~ 309 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI---IFGASSVDFSLSGRLLFAGYNDYTIN 309 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC---CSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc---ccceeEEEEeCCCCEEEEEECCCcEE
Confidence 9988642 123455778999888877788999999998876554432211 1112234454 566666666788999
Q ss_pred EEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 260 RISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 260 vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
+-|..+|+.+..+.- + .+..+.++|+|+++.|..++
T Consensus 310 vwd~~~~~~~~~l~~---------h----~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 310 VWDVLKGSRVSILFG---------H----ENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EEETTTCSEEEEECC---------C----SSCEEEEEECTTSSCEEEEE
T ss_pred EEECCCCceEEEEEC---------C----CCcEEEEEECCCCCEEEEEc
Confidence 999999998876621 1 13467899999998665554
No 144
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.87 E-value=6.7e-07 Score=91.64 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=114.9
Q ss_pred eEEEec-CCEEEEEcCCC---------C----CCeEEEEECCCCcEEEEeccCC----------CeeEEEEEEeCC--EE
Q 019103 109 GLLYAE-NDTLFESTGLY---------G----RSSVRRVALETGKVEAINQMEG----------SYFGEGLTLLGE--KL 162 (346)
Q Consensus 109 GL~~~~-d~~LyeStGly---------g----~s~V~~iDl~Tgkv~~~~~l~~----------~~FgeGit~~g~--~L 162 (346)
.+++++ ++.+|+++|.- + .+.|..+|++||+++=+.++.+ .+--.+...+|+ ++
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 467775 46899998631 1 1479999999999988776532 222222223343 45
Q ss_pred EEEEeeCCEEEEEECCCCcEEEEEecCC--------------C---------------------------ceeEEeeCCC
Q 019103 163 FQVTWLQKTGFIYDQNNLNKLEEFTHQM--------------K---------------------------DGWGLATDGK 201 (346)
Q Consensus 163 Y~ltw~~~~v~V~D~~tl~~i~ti~~~~--------------p---------------------------eGwGLt~Dg~ 201 (346)
++..-+++.++++|++|++++.++++.. | .+.+++++++
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 5555678899999999999999887531 0 1345778889
Q ss_pred EEEEEC-------------------------------------CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee
Q 019103 202 VLFGSD-------------------------------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (346)
Q Consensus 202 ~LyvSd-------------------------------------Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~ 244 (346)
.+|+.. ..+.|+.+|++|++++-++..+.... . .-+...
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~--~--~~~~t~ 474 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAW--G--GTLYTK 474 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCC--S--BCEEET
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCcc--c--eeEEEC
Confidence 999942 24689999999999998887754211 1 113345
Q ss_pred CCEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 245 KGEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 245 ~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
+|.||+.. .+..|..+|.+||+++-++.+.
T Consensus 475 gg~v~~g~-~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 475 GGLVWYAT-LDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp TTEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred CCEEEEEc-CCCeEEEEECCCCCEEEEEeCC
Confidence 88999964 4789999999999999999873
No 145
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.86 E-value=6.9e-07 Score=81.87 Aligned_cols=202 Identities=7% Similarity=-0.042 Sum_probs=133.1
Q ss_pred eEEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe-eEEEEEEeCCEEEEEEeeCC
Q 019103 93 IQVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY-FGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 93 ~~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~-FgeGit~~g~~LY~ltw~~~ 170 (346)
+++.+++. |. ....++.|+||+.++.+++ .+..|++||+.+++.+..+.....+ ....+..+++.|+. .-.++
T Consensus 3 l~~~~~~~~h~--~~V~~~~fsp~~~~l~s~~--~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~s~d~ 77 (304)
T 2ynn_A 3 LDIKKTFSNRS--DRVKGIDFHPTEPWVLTTL--YSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIV-GSDDF 77 (304)
T ss_dssp CCCEEEEEEEC--SCEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEE-EETTS
T ss_pred ceeEEeecCCC--CceEEEEECCCCCEEEEEc--CCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEE-ECCCC
Confidence 34455554 42 2347999999998888877 5569999999999988887765433 33333444555544 45679
Q ss_pred EEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CC
Q 019103 171 TGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KG 246 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G 246 (346)
.+.++|.++.+.+.++... .-....++||++.|+.+..+.+|.++|.++........-+ +..+ ++.+.+. ++
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-h~~~---v~~v~~~p~~~ 153 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-HEHF---VMCVAFNPKDP 153 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC-CCSC---EEEEEECTTCT
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc-cCCc---EEEEEECCCCC
Confidence 9999999999999998742 1234557889999888777899999998877544332221 1122 2345554 55
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCC-CEEEEecCCCCcEE
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR-NRIFVTGKLWPKLY 315 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~-~~LfVTGK~Wp~l~ 315 (346)
.++|+.-.++.|.+-|..+++....+.... ....+.+++.|.. +.+++||-...+|.
T Consensus 154 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp TEEEEEETTSEEEEEETTCSSCSEEEECCC------------TTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCccceeccCC------------cCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 667766678899999998887655553211 1134567787632 24555555555443
No 146
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.85 E-value=1.7e-06 Score=82.25 Aligned_cols=209 Identities=13% Similarity=0.060 Sum_probs=132.1
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEE
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTG 172 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v 172 (346)
+.+.++. |. .....+.|++++..+.+++ .+..|++||+.+++....+..........+.+.+++++++.-.++.+
T Consensus 156 ~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v 231 (393)
T 1erj_A 156 KIVMILQGHE--QDIYSLDYFPSGDKLVSGS--GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV 231 (393)
T ss_dssp EEEEEECCCS--SCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCE
T ss_pred cEEEEEccCC--CCEEEEEEcCCCCEEEEec--CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 4455554 43 2346899999997777777 56799999999999888777665543333333245566666678999
Q ss_pred EEEECCCCcEEEEEecC---------CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC--------Ceee
Q 019103 173 FIYDQNNLNKLEEFTHQ---------MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--------GREV 235 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~---------~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~--------G~pv 235 (346)
.++|..+.+.+.++..+ .-....+++||+.|+....+++|.++|..+.+.......... |+.
T Consensus 232 ~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~- 310 (393)
T 1erj_A 232 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK- 310 (393)
T ss_dssp EEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS-
T ss_pred EEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc-
Confidence 99999999988887421 113345778999998877788999999887544322111100 110
Q ss_pred eeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCC-----CCEEEEecC
Q 019103 236 RNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSN-----RNRIFVTGK 309 (346)
Q Consensus 236 ~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~-----~~~LfVTGK 309 (346)
..++.+.+. +|...+..-.+..|.+-|.++|+.+..+.-. ....+.+|+.+. ...+++||-
T Consensus 311 ~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h-------------~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 311 DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH-------------RNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC-------------SSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC-------------CCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 012234343 4555555556889999999999988877431 123567888864 346778887
Q ss_pred CCCcEEEEEEe
Q 019103 310 LWPKLYEINLR 320 (346)
Q Consensus 310 ~Wp~l~ev~l~ 320 (346)
...++.--++.
T Consensus 378 ~Dg~i~iW~~~ 388 (393)
T 1erj_A 378 GDCKARIWKYK 388 (393)
T ss_dssp TTSEEEEEEEE
T ss_pred CCCcEEECccc
Confidence 77766555443
No 147
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.85 E-value=6.4e-07 Score=86.08 Aligned_cols=197 Identities=10% Similarity=0.032 Sum_probs=134.1
Q ss_pred EEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--eCCEEEEEEeeCCEEE
Q 019103 96 VNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQKTGF 173 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~g~~LY~ltw~~~~v~ 173 (346)
+.++.. .......+.|++++.++.+++ .+..|++||+.+++.+..+.-.... -..++. .++.|+ +.-.++.+.
T Consensus 143 ~~~l~~-h~~~V~~v~~~~~~~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~-V~~v~~~p~~~~l~-s~s~D~~i~ 217 (410)
T 1vyh_C 143 ERTLKG-HTDSVQDISFDHSGKLLASCS--ADMTIKLWDFQGFECIRTMHGHDHN-VSSVSIMPNGDHIV-SASRDKTIK 217 (410)
T ss_dssp CEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCCCEEETTSSCEEECCCCCSSC-EEEEEECSSSSEEE-EEETTSEEE
T ss_pred EEEEec-cCCcEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCceeEEEcCCCCC-EEEEEEeCCCCEEE-EEeCCCeEE
Confidence 445542 233457999999998888877 5569999999999987776432221 233444 445554 445689999
Q ss_pred EEECCCCcEEEEEecCC--CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-------
Q 019103 174 IYDQNNLNKLEEFTHQM--KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI------- 244 (346)
Q Consensus 174 V~D~~tl~~i~ti~~~~--peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~------- 244 (346)
++|..+.+.+.++.... -....+++||+.|+.+..++.|.++|..+.+...++.-.. .++ +.+.+.
T Consensus 218 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~--~~v---~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR--HVV---ECISWAPESSYSS 292 (410)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCE---EEEEECCSCGGGG
T ss_pred EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCC--ceE---EEEEEcCcccccc
Confidence 99999999999987431 1233456788888887778899999999988876654322 122 122222
Q ss_pred --------------CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 245 --------------KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 245 --------------~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
+|...++.-.++.|.+.|..+|+.+.++.-. .+..++++|+|+++.|+..+ .
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h-------------~~~v~~v~~~~~g~~l~s~s-~ 358 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH-------------DNWVRGVLFHSGGKFILSCA-D 358 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC-------------SSCEEEEEECSSSSCEEEEE-T
T ss_pred hhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC-------------CCcEEEEEEcCCCCEEEEEe-C
Confidence 2555666666889999999999998887421 12468899999988777655 3
Q ss_pred CCcEEE
Q 019103 311 WPKLYE 316 (346)
Q Consensus 311 Wp~l~e 316 (346)
...|+-
T Consensus 359 D~~i~v 364 (410)
T 1vyh_C 359 DKTLRV 364 (410)
T ss_dssp TTEEEE
T ss_pred CCeEEE
Confidence 444433
No 148
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.85 E-value=2.7e-07 Score=85.62 Aligned_cols=205 Identities=12% Similarity=0.116 Sum_probs=130.3
Q ss_pred ceeEEEecC----C---EEEEEcCCCCCCeEEEEECCCCcE-----EEEeccC------CCeeEEEEE----EeCCEEEE
Q 019103 107 TQGLLYAEN----D---TLFESTGLYGRSSVRRVALETGKV-----EAINQME------GSYFGEGLT----LLGEKLFQ 164 (346)
Q Consensus 107 TqGL~~~~d----~---~LyeStGlyg~s~V~~iDl~Tgkv-----~~~~~l~------~~~FgeGit----~~g~~LY~ 164 (346)
...+.|+++ + .++.+.+ .+..|++||+.+++. ...+... .......+. .+++.+++
T Consensus 65 v~~~~~~~~~~~~g~~~~~l~s~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 65 LHHVDVLQAIERDAFELCLVATTS--FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp EEEEEEEEEEETTTEEEEEEEEEE--TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred EEEEEEecccccCCccccEEEEEc--CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 478999998 8 8777777 456999999999885 5555433 444444444 44565244
Q ss_pred EEeeCCEEEEEECCC------CcEEE-----EEec--------C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEE
Q 019103 165 VTWLQKTGFIYDQNN------LNKLE-----EFTH--------Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIR 224 (346)
Q Consensus 165 ltw~~~~v~V~D~~t------l~~i~-----ti~~--------~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~ 224 (346)
+.-.++.+.++|..+ .+.+. ++.. . ......+++|+ .+++...++.|.++|..+.+.+.
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY 221 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE
T ss_pred EEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeE
Confidence 455679999999988 66665 6631 1 23556678889 77777778999999999999888
Q ss_pred EEEe---cc-CCeeeeeceeeEee-CCEEEEEecCC---CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEE
Q 019103 225 KDIV---RY-KGREVRNLNELEFI-KGEVWANVWQT---DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIA 296 (346)
Q Consensus 225 ~I~V---~~-~G~pv~~lNELE~~-~G~LyaNv~~s---n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA 296 (346)
++.. .. ...++ +.+.+. +|.+++..-.+ ..|.+.|..+++.+..+....................+.++
T Consensus 222 ~~~~~~~h~~~~~~i---~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 222 NFESQHSMINNSNSI---RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp EEECCC---CCCCCE---EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEE
T ss_pred EEeccccccccCCcc---ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEE
Confidence 8876 20 01222 345554 45544444445 78999999999999888431100000000000123568899
Q ss_pred EeCCCCEEEEecCCCCcEEEEE
Q 019103 297 WDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 297 ~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
|+|+++.|+..+ ....|+--+
T Consensus 299 ~~~~~~~l~~~~-~dg~i~iwd 319 (397)
T 1sq9_A 299 FNDSGETLCSAG-WDGKLRFWD 319 (397)
T ss_dssp ECSSSSEEEEEE-TTSEEEEEE
T ss_pred ECCCCCEEEEEe-CCCeEEEEE
Confidence 999998776665 344444433
No 149
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.84 E-value=1.4e-06 Score=84.06 Aligned_cols=209 Identities=13% Similarity=0.144 Sum_probs=125.4
Q ss_pred eeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc-EEEEecc--CCCeeEEEEEEe-----CCEE
Q 019103 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-VEAINQM--EGSYFGEGLTLL-----GEKL 162 (346)
Q Consensus 91 ~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk-v~~~~~l--~~~~FgeGit~~-----g~~L 162 (346)
++++++.+ + -....||++++||+||++.- . .+|.++| .+|+ .+..+++ ....-..||+++ ++.|
T Consensus 19 ~~~~~va~---~-l~~P~~ia~~pdG~l~V~e~--~-g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~l 90 (354)
T 3a9g_A 19 FKISEVAS---D-LEVPWSIAPLGGGRYLVTER--P-GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWV 90 (354)
T ss_dssp EEEEEEEC---S-CSCEEEEEEEETTEEEEEET--T-TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred eEEEEEeC---C-CCCCeEEEEcCCCeEEEEeC--C-CEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEE
Confidence 45666654 1 22337999999999999964 2 5999998 4565 2333221 111223567776 4699
Q ss_pred EEEEee---C----CEEEEEECCCC-------cE-EEEEecC---CCceeEEeeCCCEEEEECCC--------------C
Q 019103 163 FQVTWL---Q----KTGFIYDQNNL-------NK-LEEFTHQ---MKDGWGLATDGKVLFGSDGS--------------S 210 (346)
Q Consensus 163 Y~ltw~---~----~~v~V~D~~tl-------~~-i~ti~~~---~peGwGLt~Dg~~LyvSdGs--------------~ 210 (346)
|++... + +.|+.++.+.. +. +..++.. .+.+..+.+|| +||+++|+ .
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G 169 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAG 169 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSS
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCe
Confidence 999764 3 78999987643 22 2335532 35667788888 59999763 3
Q ss_pred eEEEEeCCCC----------cEE----------------EEEEeccCC-------------------------------e
Q 019103 211 MLYQIDPQTL----------KVI----------------RKDIVRYKG-------------------------------R 233 (346)
Q Consensus 211 ~l~vIDp~T~----------kvi----------------~~I~V~~~G-------------------------------~ 233 (346)
+|+.||+... ++. .++-+.+.| .
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 249 (354)
T 3a9g_A 170 KILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVD 249 (354)
T ss_dssp EEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred EEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcC
Confidence 7888887532 120 111111111 1
Q ss_pred eeee-------ceeeEe--------eCCEEEEEecCCCeEEEEeCCC-CeEEEEEECCchhhhhhhccCCCCceeeEEEE
Q 019103 234 EVRN-------LNELEF--------IKGEVWANVWQTDCIARISHED-GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAW 297 (346)
Q Consensus 234 pv~~-------lNELE~--------~~G~LyaNv~~sn~I~vID~~T-G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~ 297 (346)
|+.. +.-+.+ .+|.+|++.+..+.|.+++++. |++...-.+ +.. ....|.+|++
T Consensus 250 p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~--~~~--------~~~rp~~v~~ 319 (354)
T 3a9g_A 250 PVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF--FKN--------VFGRLRDVVI 319 (354)
T ss_dssp CSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE--CTT--------TSCCEEEEEE
T ss_pred CEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee--ccC--------CCCCeeEEEE
Confidence 1111 222333 3678999999899999999986 455432221 110 1235789999
Q ss_pred eCCCCEEEEecC---CC-------CcEEEEEE
Q 019103 298 DSNRNRIFVTGK---LW-------PKLYEINL 319 (346)
Q Consensus 298 d~~~~~LfVTGK---~W-------p~l~ev~l 319 (346)
+||| .|||+.- .| ++||+|..
T Consensus 320 ~pDG-~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 320 DDDG-GILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp CTTS-CEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred CCCC-cEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 9998 5777642 23 28999863
No 150
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.83 E-value=5.5e-07 Score=86.52 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=127.1
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
-...+.|+|++.++++++ .+..|++||+.+|+....+.-.... ...++... +.+.++.-.++.+.++|.++.+.+.
T Consensus 110 ~V~~~~~~p~~~~l~s~s--~Dg~i~vwd~~~~~~~~~l~~h~~~-V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSAS--EDATIKVWDYETGDFERTLKGHTDS-VQDISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp CEEEEEECSSSSEEEEEE--SSSCEEEEETTTCCCCEEECCCSSC-EEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred cEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCcEEEEEeccCCc-EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 346899999998888887 5669999999999987776543221 23344432 3345555678999999999999998
Q ss_pred EEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEE
Q 019103 185 EFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARI 261 (346)
Q Consensus 185 ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vI 261 (346)
++... .-....++||++.|+.+..+.+|.++|.++.+.+.++.-.. .. ++.+.+. +|.++++.-.++.|.+.
T Consensus 187 ~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~--~~---v~~~~~~~~g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 187 TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR--EW---VRMVRPNQDGTLIASCSNDQTVRVW 261 (410)
T ss_dssp CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SC---EEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC--cc---EEEEEECCCCCEEEEEcCCCeEEEE
Confidence 88632 12345577899999888788999999999999887776432 12 2334444 57777777778999999
Q ss_pred eCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCC
Q 019103 262 SHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR 301 (346)
Q Consensus 262 D~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~ 301 (346)
|..+++.+..+.- .....+.++|+|++
T Consensus 262 d~~~~~~~~~~~~-------------h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 262 VVATKECKAELRE-------------HRHVVECISWAPES 288 (410)
T ss_dssp ETTTCCEEEEECC-------------CSSCEEEEEECCSC
T ss_pred ECCCCceeeEecC-------------CCceEEEEEEcCcc
Confidence 9999998887732 12356788998863
No 151
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.83 E-value=1e-06 Score=80.65 Aligned_cols=202 Identities=10% Similarity=-0.015 Sum_probs=134.8
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe--CCEEEEEEeeCCEE
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL--GEKLFQVTWLQKTG 172 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~--g~~LY~ltw~~~~v 172 (346)
.+.++.. .......+.++|++.++.+++ .+..|++||+.++........+....-..++.. ++.++++.-.++.+
T Consensus 89 ~~~~~~~-h~~~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 89 KVVDFEA-HPDYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp EEEEEEC-CSSCEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred EEEEEeC-CCCcEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 4445542 233457999999998888877 567999999999855443332322233445554 34566666778999
Q ss_pred EEEECCCCcEEEEEecCCCce---eEEee--CCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC
Q 019103 173 FIYDQNNLNKLEEFTHQMKDG---WGLAT--DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG 246 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~~peG---wGLt~--Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G 246 (346)
.++|..+.+...++..+...+ ..+.+ |++.|+.+..+++|.++|.++.+.+.++.-.. .++ +.+.+. ++
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~--~~v---~~~~~~p~~ 240 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM--SNV---SFAVFHPTL 240 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCS--SCE---EEEEECSSS
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC--CCE---EEEEECCCC
Confidence 999998887777665432222 22333 67778777778899999999999888776533 222 234444 45
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEE-EEecCCCCcEEEEE
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRI-FVTGKLWPKLYEIN 318 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~L-fVTGK~Wp~l~ev~ 318 (346)
.+.++.-.+..|.+-|..+++++.++.... .....+|+.|+++.. +++| ..+.+.-+.
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~asg-~~~g~~~~~ 299 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGL-------------ERSWCIATHPTGRKNYIASG-FDNGFTVLS 299 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSS-------------SSEEEEEECTTCGGGCEEEE-ETTEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCC-------------ccEEEEEECCCCCceEEEEe-cCCceEEEE
Confidence 666776678899999999999999985411 134679999988765 4444 344444333
No 152
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.83 E-value=1.5e-06 Score=81.04 Aligned_cols=201 Identities=9% Similarity=0.052 Sum_probs=135.1
Q ss_pred eEEEEEEe-cCCCCcceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeC--CEEEEEEe
Q 019103 93 IQVVNEFP-HDPRAFTQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLG--EKLFQVTW 167 (346)
Q Consensus 93 ~~Vv~t~p-hd~~~FTqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g--~~LY~ltw 167 (346)
+++.+++. |.. -...+.+++++ .++.+.+ .+..|++||+.+++......+ +...--..++... +.++++.-
T Consensus 63 ~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 63 YKLHRTASPFDR--RVTSLEWHPTHPTTVAVGS--KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp CEEEEEECCCSS--CEEEEEECSSCTTEEEEEE--BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred cceEEeccCCCC--CEEEEEECCCCCCEEEEEc--CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 45555653 433 33789999988 7777766 456999999999998877764 2222223455543 35555666
Q ss_pred eCCEEEEEECCCCcEEEEEecCC-----CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeE
Q 019103 168 LQKTGFIYDQNNLNKLEEFTHQM-----KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 168 ~~~~v~V~D~~tl~~i~ti~~~~-----peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE 242 (346)
.++.+.++|..+ +.+..+.... -....+++|++.|++...++.|.++|. +.+.+.++.-.. .+ ++.+.
T Consensus 139 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~--~~---v~~~~ 211 (383)
T 3ei3_B 139 IRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK--AK---VTHAE 211 (383)
T ss_dssp TTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS--SC---EEEEE
T ss_pred CCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC--Cc---EEEEE
Confidence 789999999986 5555554321 234557889999999888899999998 566666655422 22 33455
Q ss_pred ee-CCE-EEEEecCCCeEEEEeCCC----CeEEEEEECCchhhhhhhccCCCCceeeEEEEeC-CCCEEEEecCCCCcEE
Q 019103 243 FI-KGE-VWANVWQTDCIARISHED----GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDS-NRNRIFVTGKLWPKLY 315 (346)
Q Consensus 243 ~~-~G~-LyaNv~~sn~I~vID~~T----G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~-~~~~LfVTGK~Wp~l~ 315 (346)
+. ++. +++..-.+..|.+.|..+ ++++..+.- ....+.++|+| +++.|++++. ...|+
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~~l~~~~~-d~~i~ 276 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPH--------------EKPVNAAYFNPTDSTKLLTTDQ-RNEIR 276 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEEC--------------SSCEEEEEECTTTSCEEEEEES-SSEEE
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecC--------------CCceEEEEEcCCCCCEEEEEcC-CCcEE
Confidence 65 344 677766788999999998 667766632 12468899999 8877766654 45555
Q ss_pred EEEE
Q 019103 316 EINL 319 (346)
Q Consensus 316 ev~l 319 (346)
-..+
T Consensus 277 iwd~ 280 (383)
T 3ei3_B 277 VYSS 280 (383)
T ss_dssp EEET
T ss_pred EEEC
Confidence 4443
No 153
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.83 E-value=5.8e-07 Score=94.03 Aligned_cols=206 Identities=11% Similarity=0.116 Sum_probs=137.2
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CC----eeEEEEEEeCCEEEEEEee-----CCEEEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GS----YFGEGLTLLGEKLFQVTWL-----QKTGFIYD 176 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~----~FgeGit~~g~~LY~ltw~-----~~~v~V~D 176 (346)
..|+++. ++++|+++. +..|..+|.+||+++=+.... .. .....-.+.++.+|+.+.. ++.++.+|
T Consensus 114 ~~~~~~~-~g~v~v~~~---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D 189 (689)
T 1yiq_A 114 NRGVAVW-KGKVYVGVL---DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYD 189 (689)
T ss_dssp CCCCEEE-TTEEEEECT---TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEE
T ss_pred CCccEEE-CCEEEEEcc---CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEE
Confidence 3577776 589999874 459999999999998777654 11 1111234568999997653 68999999
Q ss_pred CCCCcEEEEEecC--CCc-------------------------------eeEEeeCCCEEEEECCCC-------------
Q 019103 177 QNNLNKLEEFTHQ--MKD-------------------------------GWGLATDGKVLFGSDGSS------------- 210 (346)
Q Consensus 177 ~~tl~~i~ti~~~--~pe-------------------------------GwGLt~Dg~~LyvSdGs~------------- 210 (346)
++|++++-++... .+. ...++++++.+|+..++.
T Consensus 190 ~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~g 269 (689)
T 1yiq_A 190 AETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKG 269 (689)
T ss_dssp TTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCS
T ss_pred CCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCC
Confidence 9999999988741 111 134566789999976543
Q ss_pred ------eEEEEeCCCCcEEEEEEeccC-Ceeee-----eceeeEeeCCE---EEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 211 ------MLYQIDPQTLKVIRKDIVRYK-GREVR-----NLNELEFIKGE---VWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 211 ------~l~vIDp~T~kvi~~I~V~~~-G~pv~-----~lNELE~~~G~---LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
.|+-+|++|++++=+.+...+ ..... .+-++. .+|+ +++..-....+.++|.+||+++...++.
T Consensus 270 d~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~ 348 (689)
T 1yiq_A 270 DNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELP-IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIV 348 (689)
T ss_dssp CCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred CceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeec-cCCcEEEEEEEECCCCeEEEEECCCCCEecccccc
Confidence 599999999999877776321 00000 111222 2564 3444445789999999999999777654
Q ss_pred chh-----------h----hhh----h-------ccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 276 NLR-----------E----RLV----A-------AGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 276 ~l~-----------~----~~~----~-------~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
... + ... . .+...+....++||||+++.+||.-..++..|+.
T Consensus 349 ~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~ 416 (689)
T 1yiq_A 349 PQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEH 416 (689)
T ss_dssp CCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEEC
T ss_pred ccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeee
Confidence 310 0 000 0 0011233566799999999999998888887754
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.82 E-value=4.6e-07 Score=79.14 Aligned_cols=180 Identities=14% Similarity=0.106 Sum_probs=113.0
Q ss_pred EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCC-CcEEEEEecC---CCc
Q 019103 117 TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN-LNKLEEFTHQ---MKD 192 (346)
Q Consensus 117 ~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~t-l~~i~ti~~~---~pe 192 (346)
++|.......+..|.+||+.+++.......+.......++++++.|+... ++.++++|.++ .+........ ...
T Consensus 11 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 11 RLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -------CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred eEeecCCCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEecccccccccc
Confidence 44443332356799999999999876666665555555555677666654 78999999999 7766554322 124
Q ss_pred eeEEeeCCCEEEEEC----CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecCCC--eEEEEeCC
Q 019103 193 GWGLATDGKVLFGSD----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQTD--CIARISHE 264 (346)
Q Consensus 193 GwGLt~Dg~~LyvSd----Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~sn--~I~vID~~ 264 (346)
...+++||+.|+.+. +...|+.+|..+.+.. .+.... + .+.+.+. +| +|++.....+ .|..+|..
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~---~---~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR-LMTKNL---P---SYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE-ECCSSS---S---EEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE-EeecCC---C---ccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 467899999887754 3679999998876632 222211 1 2234444 44 5664443344 57788888
Q ss_pred CCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC--CCCcEEEEEE
Q 019103 265 DGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK--LWPKLYEINL 319 (346)
Q Consensus 265 TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK--~Wp~l~ev~l 319 (346)
++++.... . .....+.++|+|+++.|++++. ..-.||.+++
T Consensus 162 ~~~~~~~~---~-----------~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 162 SGVETRLT---H-----------GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp TCCEEECC---C-----------SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCcceEcc---c-----------CCCccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 88763211 1 1224688999999999988764 4456776653
No 155
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.81 E-value=7.6e-07 Score=91.05 Aligned_cols=201 Identities=8% Similarity=-0.055 Sum_probs=136.7
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEeeCCE
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTWLQKT 171 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw~~~~ 171 (346)
++.+++. |... ..++.++||+.++.+++ .++.|.+||..+|+.+..+.... ......+..+++.|... ..++.
T Consensus 4 ~~~~~~~~h~~~--v~~i~~sp~~~~la~~~--~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~ 78 (814)
T 3mkq_A 4 DIKKTFSNRSDR--VKGIDFHPTEPWVLTTL--YSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVG-SDDFR 78 (814)
T ss_dssp CCEEEEEEECSC--EEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEE-ETTSE
T ss_pred ccceeeecCCCc--eEEEEECCCCCEEEEEe--CCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEE-eCCCe
Confidence 3444443 4333 47999999997666655 45699999999999988887433 33344444455665555 45899
Q ss_pred EEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCC-cEEEEEEeccCCeeeeeceeeEee--CC
Q 019103 172 GFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTL-KVIRKDIVRYKGREVRNLNELEFI--KG 246 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~-kvi~~I~V~~~G~pv~~lNELE~~--~G 246 (346)
+.++|.++++.+.++... .-....+++|+++|+++..+..|.++|.++. +....+.-.. .++ ..+.+. +|
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~~v---~~~~~~p~~~ 153 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--HFV---MCVAFNPKDP 153 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS--SCE---EEEEEETTEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC--CcE---EEEEEEcCCC
Confidence 999999999999998742 1234557789999998888889999999886 4444333221 222 345665 46
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeC--CCCEEEEecCCCCcEEEE
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDS--NRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~--~~~~LfVTGK~Wp~l~ev 317 (346)
..++....+..|.+.|..+++....+.... ....+.++|+| +++.|++.+ ....+.-.
T Consensus 154 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~~l~~~~-~dg~i~~~ 213 (814)
T 3mkq_A 154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQ------------ERGVNYVDYYPLPDKPYMITAS-DDLTIKIW 213 (814)
T ss_dssp EEEEEEETTSEEEEEETTCSSCSEEEECCC------------TTCCCEEEECCSTTCCEEEEEC-TTSEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeEEecCC------------CCCEEEEEEEECCCCCEEEEEe-CCCEEEEE
Confidence 677777678899999999988776664411 12457799998 777666554 33444433
No 156
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=4.5e-07 Score=94.45 Aligned_cols=204 Identities=13% Similarity=0.140 Sum_probs=136.3
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC----eeEEEEEEeCCEEEEEEee-----CCEEEEEEC
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~----~FgeGit~~g~~LY~ltw~-----~~~v~V~D~ 177 (346)
..|+++. ++++|+++. +..|..+|++||+++=+..+... .....-.+.++++|+.+.. ++.++.+|+
T Consensus 110 ~~~~~~~-~~~v~v~~~---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~ 185 (668)
T 1kv9_A 110 NRGVALW-GDKVYVGTL---DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDA 185 (668)
T ss_dssp CCCCEEE-BTEEEEECT---TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEET
T ss_pred ccceEEE-CCEEEEEcC---CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEEC
Confidence 3577886 589999874 35999999999999888876421 1111224568999998764 589999999
Q ss_pred CCCcEEEEEecC--CCce-------------------------------eEEeeCCCEEEEECCCC--------------
Q 019103 178 NNLNKLEEFTHQ--MKDG-------------------------------WGLATDGKVLFGSDGSS-------------- 210 (346)
Q Consensus 178 ~tl~~i~ti~~~--~peG-------------------------------wGLt~Dg~~LyvSdGs~-------------- 210 (346)
+|++++-++... .|.+ ..++++++.+|+..++.
T Consensus 186 ~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd 265 (668)
T 1kv9_A 186 DTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGD 265 (668)
T ss_dssp TTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred CCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCC
Confidence 999999999752 1211 24566788999965432
Q ss_pred -----eEEEEeCCCCcEEEEEEeccCC-------eeeeeceeeEeeCCE----EEEEecCCCeEEEEeCCCCeEEEEEEC
Q 019103 211 -----MLYQIDPQTLKVIRKDIVRYKG-------REVRNLNELEFIKGE----VWANVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 211 -----~l~vIDp~T~kvi~~I~V~~~G-------~pv~~lNELE~~~G~----LyaNv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
.|+-+|++|++++=+.++..+. .|. .+.+++ .+|+ |++.. ....+.++|.+||+++..+.+
T Consensus 266 ~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~-~~~d~~-~~G~~~~~v~~~~-~~G~l~~lD~~tG~~l~~~~~ 342 (668)
T 1kv9_A 266 NLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI-TLAELN-IDGKPRKVLMQAP-KNGFFYVLDRTNGKLISAEKF 342 (668)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE-EEEEEE-ETTEEEEEEEECC-TTSEEEEEETTTCCEEEEEES
T ss_pred ceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc-EEEEec-cCCcEEEEEEEEC-CCCEEEEEECCCCCEeccccc
Confidence 5999999999999888874211 111 122333 2664 44443 578999999999999977765
Q ss_pred Cchh-----------hhhh-h---c--------cCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 275 PNLR-----------ERLV-A---A--------GYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 275 ~~l~-----------~~~~-~---~--------~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
.... +... + . +........++||||+++.+||.-..++..|+.
T Consensus 343 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~ 408 (668)
T 1kv9_A 343 GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRN 408 (668)
T ss_dssp SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECC
T ss_pred cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeee
Confidence 3210 0000 0 0 001122345699999999999977666666643
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.81 E-value=2e-07 Score=94.73 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=125.4
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCC-----CcE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNN-----LNK 182 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~t-----l~~ 182 (346)
..+.+++|+.++.+.. ..|.+||+++++.......+.......++++|++|+.+ .++.++++|..+ .+.
T Consensus 85 ~~~~~spd~~~~~~~~----~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 85 FRTLDAGRGLVVLFTQ----GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp EEEEETTTTEEEEEET----TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCC
T ss_pred eeEEECCCCeEEEEEC----CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCc
Confidence 6899999977666644 59999999999876655544444344566778877664 579999999988 766
Q ss_pred EEEEecCC----------------CceeEEeeCCCEEEEEC---------------------------------CCCeEE
Q 019103 183 LEEFTHQM----------------KDGWGLATDGKVLFGSD---------------------------------GSSMLY 213 (346)
Q Consensus 183 i~ti~~~~----------------peGwGLt~Dg~~LyvSd---------------------------------Gs~~l~ 213 (346)
......+. ..+..++|||++|+.+. +..+|+
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 54333221 25677899999987753 457899
Q ss_pred EEeCCCCcEEEEEEec-cCCeeeeeceeeEee-CC-EEEEEecCC----CeEEEEeCCCCeEEEEEECCchhhhhhhccC
Q 019103 214 QIDPQTLKVIRKDIVR-YKGREVRNLNELEFI-KG-EVWANVWQT----DCIARISHEDGVVLGWVLLPNLRERLVAAGY 286 (346)
Q Consensus 214 vIDp~T~kvi~~I~V~-~~G~pv~~lNELE~~-~G-~LyaNv~~s----n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~ 286 (346)
++|.++.+... +... ..+. .+..+.+. || +|++..... ..|.++|+++|+....+.... ..
T Consensus 239 ~~d~~~~~~~~-~~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~--------~~ 306 (706)
T 2z3z_A 239 IYHLATGKTVY-LQTGEPKEK---FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET--------DK 306 (706)
T ss_dssp EEETTTTEEEE-CCCCSCTTC---EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE--------CS
T ss_pred EEECCCCceEe-eccCCCCce---eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc--------CC
Confidence 99999887542 2221 1111 22345554 55 577654332 389999999994333332100 00
Q ss_pred CCCceeeEEEEeC--CCCEEEEecC-CCCcEEEEEE
Q 019103 287 NGIDVLNGIAWDS--NRNRIFVTGK-LWPKLYEINL 319 (346)
Q Consensus 287 ~~~~vlNGIA~d~--~~~~LfVTGK-~Wp~l~ev~l 319 (346)
.-.+..++++|+| +++.+|++++ .+..||.+.+
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~ 342 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT 342 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEEC
Confidence 0112346789999 9988877755 3577888763
No 158
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.80 E-value=1.5e-07 Score=95.93 Aligned_cols=193 Identities=11% Similarity=0.085 Sum_probs=122.0
Q ss_pred eeEEEecCCE-EEEEcCCCCCCeEEEEECCCC---cEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 108 QGLLYAENDT-LFESTGLYGRSSVRRVALETG---KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tg---kv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
..+.++|||+ |+.++. ..|.+||++++ ++......+.......++++|++|+.+. ++.++++|.++.+..
T Consensus 112 ~~~~~SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCCEECTTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEE
T ss_pred ceeEECCCCCEEEEEeC----CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEE
Confidence 5789999995 444433 59999999999 6543333334444555666778776654 579999999988765
Q ss_pred EEEecCC------------------CceeEEeeCCCEEEEEC--CC-------------------------------CeE
Q 019103 184 EEFTHQM------------------KDGWGLATDGKVLFGSD--GS-------------------------------SML 212 (346)
Q Consensus 184 ~ti~~~~------------------peGwGLt~Dg~~LyvSd--Gs-------------------------------~~l 212 (346)
.....+. ..+..++|||++|+.+. ++ ..|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 4433221 25577899999887752 21 189
Q ss_pred EEEeCCC-CcEEEEEEec-cCCeeeeeceeeEeeC-CEEEEEec----CCCeEEEEeCCCCeEEEEEECCchhhhhhhcc
Q 019103 213 YQIDPQT-LKVIRKDIVR-YKGREVRNLNELEFIK-GEVWANVW----QTDCIARISHEDGVVLGWVLLPNLRERLVAAG 285 (346)
Q Consensus 213 ~vIDp~T-~kvi~~I~V~-~~G~pv~~lNELE~~~-G~LyaNv~----~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~ 285 (346)
+++|.++ .+.. .+..+ .+... +..+.+.| .+|++... ....|.++|+++|++...+.-.. .
T Consensus 266 ~~~d~~~~~~~~-~~~~~~~~~~~---~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~------- 333 (741)
T 2ecf_A 266 GVISPAEQAQTQ-WIDLGKEQDIY---LARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETS-P------- 333 (741)
T ss_dssp EEECSSTTCCCE-EECCCSCSSEE---EEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEEC-S-------
T ss_pred EEEECCCCCceE-EecCCCCcceE---EEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCC-C-------
Confidence 9999988 7754 33332 12222 23344434 46765543 24579999999999876663210 0
Q ss_pred CCCCceeeEEEEeCCCCEEEEecCC-CCcEEEEEE
Q 019103 286 YNGIDVLNGIAWDSNRNRIFVTGKL-WPKLYEINL 319 (346)
Q Consensus 286 ~~~~~vlNGIA~d~~~~~LfVTGK~-Wp~l~ev~l 319 (346)
.-....+.++|+|+++.+|++++. +..||.+.+
T Consensus 334 -~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 334 -TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp -SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECS
T ss_pred -CcCCcCCceEECCCCeEEEEecCCCccEEEEEcC
Confidence 000123578999999976666553 357777763
No 159
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.78 E-value=3.9e-08 Score=93.04 Aligned_cols=189 Identities=8% Similarity=0.012 Sum_probs=122.3
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc---C--CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCc
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM---E--GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~--~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
...++|+++++++.++. +..|++||+.+++......+ + .......+.++++.| ++.-.++.+.++|.++.+
T Consensus 97 V~~~~~s~d~~~l~~s~---dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l-~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 97 VTDVAWVSEKGILVASD---SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQA-VSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp EEEEEEETTTEEEEEET---TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTTE
T ss_pred EEEEEEcCCCCEEEEEC---CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCc
Confidence 36899999998876643 45899999999875433322 1 223333333344554 444567899999999999
Q ss_pred EEEEEecC--CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCC
Q 019103 182 KLEEFTHQ--MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTD 256 (346)
Q Consensus 182 ~i~ti~~~--~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn 256 (346)
.+.++... .-....++++++.++++- .+++|.++|.++.+.+..+.......+ ++.+.+. ++.++|.--.+.
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~---v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTI---PTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSC---EEEEEECTTSTTEEEEEESSS
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccccc---ccchhhhhcccceEEEeeccc
Confidence 99998753 123445677887666654 477999999999887766655432222 2335554 456777666688
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
.|.+.|..+++.+.++... ....+.|||+|++.++++||-...+|+
T Consensus 250 ~i~~wd~~~~~~~~~~~~~-------------~~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVH-------------SQNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp CEEEEESSCGGGCEEECCC-------------SSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred ceeEEECCCCcEeEEEecc-------------ceeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 8999999999987776321 124588999999988888876655554
No 160
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.78 E-value=5.3e-06 Score=75.07 Aligned_cols=191 Identities=9% Similarity=0.004 Sum_probs=119.9
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--e-CCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--L-GEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~-g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
...+.+++++.++.+.+ .+..|++||+.+++.+........... +.. . ++.++++.-.++.+.++|..+.+.+
T Consensus 89 v~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 89 VLDVCWSDDGSKVFTAS--CDKTAKMWDLSSNQAIQIAQHDAPVKT--IHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp EEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEE--EEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred EEEEEECcCCCEEEEEc--CCCcEEEEEcCCCCceeeccccCceEE--EEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 47999999987766766 456999999999998876665555434 444 3 3455666667899999999999998
Q ss_pred EEEecCCCceeEEeeCCCEEEEECCCCeEEE------------------------------------------------E
Q 019103 184 EEFTHQMKDGWGLATDGKVLFGSDGSSMLYQ------------------------------------------------I 215 (346)
Q Consensus 184 ~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~v------------------------------------------------I 215 (346)
.++... .....+...+..++++..++.+.+ +
T Consensus 165 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 165 MVLQLP-ERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIH 243 (368)
T ss_dssp EEEECS-SCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEE
T ss_pred EEEecC-CCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEE
Confidence 888764 233334444444444444444444 4
Q ss_pred eCCCC---cEEEEEEeccCC-------eeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhc
Q 019103 216 DPQTL---KVIRKDIVRYKG-------REVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAA 284 (346)
Q Consensus 216 Dp~T~---kvi~~I~V~~~G-------~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~ 284 (346)
|..+. +.+..+...... .....++.+.+. +|...+..-.++.|.+.|..+++.+..+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------- 314 (368)
T 3mmy_A 244 YINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL--------- 314 (368)
T ss_dssp ESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC---------
T ss_pred ecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCC---------
Confidence 44433 112222211100 000013344454 5655555556888999999999988776321
Q ss_pred cCCCCceeeEEEEeCCCCEEEEecCC-CCcEE
Q 019103 285 GYNGIDVLNGIAWDSNRNRIFVTGKL-WPKLY 315 (346)
Q Consensus 285 ~~~~~~vlNGIA~d~~~~~LfVTGK~-Wp~l~ 315 (346)
....+.++|+|+++.|.+++.. |.+.+
T Consensus 315 ----~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 315 ----DQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp ----SSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred ----CCCceEEEECCCCCeEEEEecccccccc
Confidence 2256889999999998888653 44443
No 161
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.78 E-value=4.5e-06 Score=79.12 Aligned_cols=204 Identities=14% Similarity=0.048 Sum_probs=136.3
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--eCCEEEEEEeeCC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LGEKLFQVTWLQK 170 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~g~~LY~ltw~~~ 170 (346)
.++++.-.|....+...+.+++ +.++.+ + .+..|++||+.+|+.......+....-..++. +++.|+... .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~s~-~~l~~~-~--~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~-~dg 156 (401)
T 4aez_A 82 ERVLDAPGIIDDYYLNLLDWSN-LNVVAV-A--LERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL-GNG 156 (401)
T ss_dssp SEEEECTTCCCCTTCBCEEECT-TSEEEE-E--ETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTS
T ss_pred ceeeeCCCCcCCceEEEEeecC-CCEEEE-E--CCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC-CCC
Confidence 3444433343334445677765 334433 3 34599999999999988887743222333444 445555544 578
Q ss_pred EEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCC-CcEEEEEEeccCCeeeeeceeeEee-CCEE
Q 019103 171 TGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGREVRNLNELEFI-KGEV 248 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~~~G~pv~~lNELE~~-~G~L 248 (346)
.+.++|..+.+.+.++......-..++.+++.|+....++.|.++|..+ .+.+..+.-.. .+ +..+.+. +|..
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~---v~~~~~~~~~~~ 231 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHS--SE---VCGLAWRSDGLQ 231 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS--SC---EEEEEECTTSSE
T ss_pred eEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCC--CC---eeEEEEcCCCCE
Confidence 9999999999999998743234456888899988888899999999984 44444444322 22 2345555 5666
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC--CCCcEEEEEE
Q 019103 249 WANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK--LWPKLYEINL 319 (346)
Q Consensus 249 yaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK--~Wp~l~ev~l 319 (346)
++..-.++.|.+.|..+++.+..+.- .......++|+|+++.++++|. ....|+-..+
T Consensus 232 l~s~~~d~~v~iwd~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIPKFTKTN-------------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp EEEEETTSCEEEEETTCSSEEEEECC-------------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred EEEEeCCCeEEEccCCCCCccEEecC-------------CcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 66666788999999999998877632 1124578999999998998864 5666655544
No 162
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.7e-06 Score=81.06 Aligned_cols=205 Identities=14% Similarity=0.036 Sum_probs=133.1
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEE----Eec-cCCCeeEEEEEEe--CCEEEEEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEA----INQ-MEGSYFGEGLTLL--GEKLFQVT 166 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~----~~~-l~~~~FgeGit~~--g~~LY~lt 166 (346)
+.+....|... ...+.|++++..+.+++ .+..|..||+.+++... .+. -........+.++ +++++++.
T Consensus 141 ~~~~~~~~~~~--v~~~~~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 216 (450)
T 2vdu_B 141 KLRKRFCFSKR--PNAISIAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS 216 (450)
T ss_dssp EEEEEEECSSC--EEEEEECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEE
T ss_pred eeeecccCCCC--ceEEEEcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEE
Confidence 34444345333 36999999987665555 34589999999887543 211 1223333334444 14455555
Q ss_pred eeCCEEEEEECCCCcEEEEEecC---CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCee---------
Q 019103 167 WLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGRE--------- 234 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~i~ti~~~---~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~p--------- 234 (346)
-.++.+.++|..+.+.+.++..+ ......++ |++.|+....+++|.++|..+++.+.++.+.....+
T Consensus 217 ~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (450)
T 2vdu_B 217 DRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAP 295 (450)
T ss_dssp ETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-
T ss_pred cCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccc
Confidence 56799999999999988886532 12344566 899999877889999999999999999886420000
Q ss_pred -----------eeeceeeEee--CCEEEEEecCCCeEEEEeC--CCC---eEEEEEECCchhhhhhhccCCCCceeeEEE
Q 019103 235 -----------VRNLNELEFI--KGEVWANVWQTDCIARISH--EDG---VVLGWVLLPNLRERLVAAGYNGIDVLNGIA 296 (346)
Q Consensus 235 -----------v~~lNELE~~--~G~LyaNv~~sn~I~vID~--~TG---~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA 296 (346)
-..+..+.+. +.+|++.....+.|.+.|. .++ +.+..+... ..+.+++
T Consensus 296 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--------------~~v~~~~ 361 (450)
T 2vdu_B 296 PRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--------------YNVISLS 361 (450)
T ss_dssp ---------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--------------SCEEEEE
T ss_pred ccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--------------CceEEEE
Confidence 0012234343 3478888867899999999 666 777777541 2467899
Q ss_pred EeCCCCEEEEecCCCC---------cEEEEEE
Q 019103 297 WDSNRNRIFVTGKLWP---------KLYEINL 319 (346)
Q Consensus 297 ~d~~~~~LfVTGK~Wp---------~l~ev~l 319 (346)
|+|+ .+|++.-... .+|.++.
T Consensus 362 ~~~~--~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 362 AHND--EFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EETT--EEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ecCC--cEEEEEecccCCCCCCcceEEEEEEc
Confidence 9993 5666644432 7777653
No 163
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.77 E-value=1.4e-06 Score=79.57 Aligned_cols=193 Identities=9% Similarity=-0.039 Sum_probs=124.0
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCc--EEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGK--VEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk--v~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
..+.+++|+.++.+++ .+..|++||+.+++ .+..+.- ........+..+++.|+.. -.++.+.++|.++.+...
T Consensus 12 ~~~~~s~~~~~l~~~~--~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICP--NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC-GTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CEEEECTTSSEEEEEC--SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEE-ETTSCEEEEEEETTEEEE
T ss_pred EEEEECCCCCEEEEEe--CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEE-cCCCeEEEEECCCCeeee
Confidence 6899999998776666 45699999999997 5555542 2333343333345555544 467899999999888666
Q ss_pred EEecC----CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEE
Q 019103 185 EFTHQ----MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIA 259 (346)
Q Consensus 185 ti~~~----~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~ 259 (346)
.+... ......+++|++.|+++..++.|.++|..+.+.......-..++. ..++.+.+. ++..++..-.++.|.
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR-STVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC-SCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC-CCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 65431 123455678999999988888999988877663222211111111 123346665 555555555688899
Q ss_pred EEeC------------------CCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 260 RISH------------------EDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 260 vID~------------------~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
+.|. .+++.+..+.- .....+.++|+|+++.|++++ ....|+-.+
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d 230 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSS-------------SCGWVHGVCFSANGSRVAWVS-HDSTVCLAD 230 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC-------------CSSCEEEEEECSSSSEEEEEE-TTTEEEEEE
T ss_pred EEEcccccccccccccccccccchhhheEecCC-------------CCCeEEEEEECCCCCEEEEEe-CCCEEEEEE
Confidence 9994 46777666632 122468899999998777665 344444433
No 164
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.76 E-value=3.3e-06 Score=79.44 Aligned_cols=200 Identities=9% Similarity=-0.013 Sum_probs=134.8
Q ss_pred eEEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEEeCCEEEEEEeeCC
Q 019103 93 IQVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 93 ~~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~~g~~LY~ltw~~~ 170 (346)
.+..+++. |. .-...+.|++|+.++.|++ .+..|++||..+++....+..+.. .....+.+++. ..++...++
T Consensus 54 ~~~~~~l~gH~--~~V~~~~~s~d~~~l~s~s--~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d~ 128 (354)
T 2pbi_B 54 MKTRRTLKGHG--NKVLCMDWCKDKRRIVSSS--QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC-AIACGGLDN 128 (354)
T ss_dssp CCEEEEEECCS--SCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS-EEEEESTTS
T ss_pred cEEEEEecCCC--CeEEEEEECCCCCEEEEEe--CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC-EEEEeeCCC
Confidence 44556664 53 3347999999998888888 566999999999998887776543 22322333344 445566789
Q ss_pred EEEEEECCCC------cEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeE
Q 019103 171 TGFIYDQNNL------NKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 171 ~v~V~D~~tl------~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE 242 (346)
.+.++|.... .....+... .-....+++|++.|+.+.++.+|.++|.++.+.+.++.-.. .++ +-+.
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~--~~v---~~~~ 203 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHG--ADV---LCLD 203 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SCE---EEEE
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCC--CCe---EEEE
Confidence 9999987532 233333321 12344567899999988889999999999999887776432 222 2233
Q ss_pred ee---CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 243 FI---KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 243 ~~---~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
+. +|..++..-.+..|.+-|..+++.+..+... ....++++|+|+++.|+..+ ...++.-
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~l~s~s-~D~~v~l 266 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH-------------ESDVNSVRYYPSGDAFASGS-DDATCRL 266 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCC-------------SSCEEEEEECTTSSEEEEEE-TTSCEEE
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-------------CCCeEEEEEeCCCCEEEEEe-CCCeEEE
Confidence 32 4566666666889999999999998877321 12468999999988665544 4454443
No 165
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.76 E-value=1.1e-06 Score=82.02 Aligned_cols=184 Identities=9% Similarity=0.052 Sum_probs=124.1
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCC--
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNN-- 179 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~t-- 179 (346)
.....+.+++++.++.+.+ .+..|.+||+ +++.+..+.- .... ..++.. ++.++++.-.++.+.++|..+
T Consensus 164 ~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~-~~~~~~~~~~h~~~v--~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGD--STGRLLLLGL-DGHEIFKEKLHKAKV--THAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CCEEEEEEETTTTEEEEEE--TTSEEEEEET-TSCEEEEEECSSSCE--EEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CCeEEEEECCCCCEEEEEC--CCCCEEEEEC-CCCEEEEeccCCCcE--EEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 3457899999998777766 4569999999 5666666543 2333 334443 443666666789999999998
Q ss_pred --CcEEEEEecC-CCceeEEee-CCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC-----CeeeeeceeeEee-CCEEE
Q 019103 180 --LNKLEEFTHQ-MKDGWGLAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK-----GREVRNLNELEFI-KGEVW 249 (346)
Q Consensus 180 --l~~i~ti~~~-~peGwGLt~-Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~-----G~pv~~lNELE~~-~G~Ly 249 (346)
.+.+..+.+. .-....+++ |++.|+++..++.|.++|..+++...++.-... ..++. ..+. ++.+.
T Consensus 239 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~ 314 (383)
T 3ei3_B 239 DKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK----ATWHPMYDLI 314 (383)
T ss_dssp STTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC----CEECSSSSEE
T ss_pred cccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE----EeccCCCCce
Confidence 6777777654 234455778 999999888889999999999888766654221 11111 1222 22222
Q ss_pred EEe---------cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 250 ANV---------WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 250 aNv---------~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
+.. ..++.|.+.|..+++.+..+.... ...+.+.++|+|+++.|..++
T Consensus 315 ~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~-----------~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 315 VAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPN-----------AAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp EEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTT-----------BCSCCCEEEECTTSSEEEEEE
T ss_pred EEEecCCcccccCCCCeEEEEecCCCceeeeecCCC-----------CCceEEEEEEecCccEEEEec
Confidence 222 246789999999999988884311 123667789999998776664
No 166
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.76 E-value=4.5e-06 Score=75.31 Aligned_cols=194 Identities=8% Similarity=-0.005 Sum_probs=127.6
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE--eC-CEEEEEEeeCCEEEEEECCCCcEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL--LG-EKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~--~g-~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
.....+.+++.++++.+ .+..+.+||............+.......+.. .+ +.+++..-.++.+.++|..+.+.+
T Consensus 131 ~~~~~~~~~~~~l~s~s--~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 131 VLSVAFSSDNRQIVSGS--RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp EEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eeEEEEeecCccceeec--CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 35667777777667766 45699999998776544333322222222333 33 345666677899999999999999
Q ss_pred EEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeC-CEEEEEecCCCeEEE
Q 019103 184 EEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK-GEVWANVWQTDCIAR 260 (346)
Q Consensus 184 ~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~-G~LyaNv~~sn~I~v 260 (346)
.++... .-....+++|++.|+.+..++.|.++|..+.+.+..+.... + ++.+.+.. +++.+.. .++.|.+
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~---v~~~~~~~~~~~~~~~-~d~~i~i 281 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---I---INALCFSPNRYWLCAA-TGPSIKI 281 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---C---EEEEEECSSSSEEEEE-ETTEEEE
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---e---EEeeecCCCCceeecc-CCCEEEE
Confidence 888642 11345578899999887778899999999999888776543 2 23455554 4554443 4789999
Q ss_pred EeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 261 ISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 261 ID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
.|.+++..+..+.-........ ......+.+||+|+++.|+.++ ....|
T Consensus 282 wd~~~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~s~dg~~l~sgs-~Dg~v 330 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVISTSSK----AEPPQCTSLAWSADGQTLFAGY-TDNLV 330 (340)
T ss_dssp EETTTTEEEEEECCC-----------CCCCCEEEEEECTTSSEEEEEE-TTSCE
T ss_pred EECCCCeEEEeccccceeeecc----CCCCCEEEEEECCCCCEEEEEe-CCCEE
Confidence 9999999988885422211100 1123567899999998776554 44544
No 167
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.75 E-value=3.8e-06 Score=77.62 Aligned_cols=203 Identities=10% Similarity=0.049 Sum_probs=131.2
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-------CEEEEE
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-------EKLFQV 165 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-------~~LY~l 165 (346)
+.+.++. |. .....+.+++++.++.+.+ .+..|++||+....+ ..+.-. ...-..+.... +..+++
T Consensus 98 ~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s--~D~~i~vwd~~~~~~-~~~~~h-~~~v~~~~~~~~~~~~~~~~~l~s 171 (319)
T 3frx_A 98 ETYQRFVGHK--SDVMSVDIDKKASMIISGS--RDKTIKVWTIKGQCL-ATLLGH-NDWVSQVRVVPNEKADDDSVTIIS 171 (319)
T ss_dssp EEEEEEECCS--SCEEEEEECTTSCEEEEEE--TTSCEEEEETTSCEE-EEECCC-SSCEEEEEECCC------CCEEEE
T ss_pred CeeEEEccCC--CcEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCeE-EEEecc-CCcEEEEEEccCCCCCCCccEEEE
Confidence 3455554 43 2347899999998888877 556999999975543 333211 11122333322 224555
Q ss_pred EeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEe
Q 019103 166 TWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF 243 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~ 243 (346)
.-.++.+.++|.++.+...++.-. .-....++|||+.|..+..+++|.++|..+.+.+.++.... + ++.+.+
T Consensus 172 ~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~---v~~~~~ 245 (319)
T 3frx_A 172 AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD---E---VFSLAF 245 (319)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS---C---EEEEEE
T ss_pred EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC---c---EEEEEE
Confidence 667899999999999988887532 12445678899998887778999999999999888876532 2 234555
Q ss_pred e-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 244 I-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 244 ~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
. +|+..+.. ..+.|.+.|.+++..+..+.. .+...... .......+||+|+++.|+..+ ....|+
T Consensus 246 sp~~~~la~~-~~~~i~v~~~~~~~~~~~~~~-~~~~~~~~----~~~~v~~~~~spdg~~l~sg~-~Dg~i~ 311 (319)
T 3frx_A 246 SPNRYWLAAA-TATGIKVFSLDPQYLVDDLRP-EFAGYSKA----AEPHAVSLAWSADGQTLFAGY-TDNVIR 311 (319)
T ss_dssp CSSSSEEEEE-ETTEEEEEEETTEEEEEEECC-CCTTCCGG----GCCCEEEEEECTTSSEEEEEE-TTSCEE
T ss_pred cCCCCEEEEE-cCCCcEEEEeCcCeeeeccCc-cccccccC----cCcceeEEEECCCCCEEEEee-cCceEE
Confidence 5 45544443 366789999999988877743 11110000 112356899999999876554 444443
No 168
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.6e-07 Score=87.46 Aligned_cols=196 Identities=8% Similarity=0.031 Sum_probs=131.6
Q ss_pred ceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCc------EEEEe----ccCCCeeEEEEEEeCCEEEEEEeeCCEEEEE
Q 019103 107 TQGLLYAEN-DTLFESTGLYGRSSVRRVALETGK------VEAIN----QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIY 175 (346)
Q Consensus 107 TqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgk------v~~~~----~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~ 175 (346)
...+.|+++ +.++.+.+ .+..|++||+.+++ ..... ..........+..+++.++++.-.++.+.++
T Consensus 116 v~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 116 VKTVKFNAKQDNVLASGG--NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp CCEEEECSSSTTBEEEEC--SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred eEEEEEcCCCCCEEEEEc--CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence 378999987 67777766 45699999999986 22222 1122333333333445667777778999999
Q ss_pred ECCCCcEEEEEecC--------CCceeEEeeCCC-EEEEECCCC---eEEEEeCCCC-cEEEEEEeccCCeeeeeceeeE
Q 019103 176 DQNNLNKLEEFTHQ--------MKDGWGLATDGK-VLFGSDGSS---MLYQIDPQTL-KVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 176 D~~tl~~i~ti~~~--------~peGwGLt~Dg~-~LyvSdGs~---~l~vIDp~T~-kvi~~I~V~~~G~pv~~lNELE 242 (346)
|.++.+.+.++... ......+++|+. .+++...++ .|.++|.++. +.+..+..+ +..+ ++.+.
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~-~~~~---v~~~~ 269 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQG-HQKG---ILSLD 269 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSC-CSSC---EEEEE
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecC-ccCc---eeEEE
Confidence 99999999988753 123445678875 455544454 9999999886 333333201 1122 23466
Q ss_pred ee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 243 FI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 243 ~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+. ++.+++..-.++.|.+.|.++++.+..+... ....+.++|+|++..+++++-....|.--++.
T Consensus 270 ~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-------------GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS-------------SSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC-------------CCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence 64 5666666667889999999999999888541 12357799999997778888878877666654
Q ss_pred e
Q 019103 321 E 321 (346)
Q Consensus 321 ~ 321 (346)
.
T Consensus 337 ~ 337 (416)
T 2pm9_A 337 N 337 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 169
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.75 E-value=1.1e-06 Score=82.31 Aligned_cols=200 Identities=11% Similarity=0.047 Sum_probs=129.1
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC--eeEEEEEE----------------------eCC
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS--YFGEGLTL----------------------LGE 160 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~--~FgeGit~----------------------~g~ 160 (346)
.....+.+++++.++.+++ .+..|++||+.+++.+..+..... ..-..++. .++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~--~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSAS--LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SCEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CcEEEEEEcCCCCEEEEEc--CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 3347999999997777766 456999999999998888764211 11111111 124
Q ss_pred EEEEEEeeCCEEEEEECCCCcEEEEEecCC---CceeEEeeCCC-EEEEECCCCeEEEEeCCCCcE-EEEEEeccCCeee
Q 019103 161 KLFQVTWLQKTGFIYDQNNLNKLEEFTHQM---KDGWGLATDGK-VLFGSDGSSMLYQIDPQTLKV-IRKDIVRYKGREV 235 (346)
Q Consensus 161 ~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~---peGwGLt~Dg~-~LyvSdGs~~l~vIDp~T~kv-i~~I~V~~~G~pv 235 (346)
.+.++.-.++.+.++|..+.+.+.++..+. -....+++|++ .|+++..++.|.++|..+.+. +.++... ++.++
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~-~~~~v 338 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN-EGTPI 338 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES-TTSCE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc-CCCCc
Confidence 455555668899999999999988886531 23445678888 777777789999999998754 5555542 22343
Q ss_pred eeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC---EEEEecCCCC
Q 019103 236 RNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN---RIFVTGKLWP 312 (346)
Q Consensus 236 ~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~---~LfVTGK~Wp 312 (346)
. -+.+.+|.+++..-.++.|.+-|..+.+-...+........+ .........++|+|+++ +++.+|.. +
T Consensus 339 ~---~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~g~l~a~g~~-g 410 (420)
T 3vl1_A 339 N---NVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFL----VSNDDAVSQFCYVSDDESNGEVLEVGKN-N 410 (420)
T ss_dssp E---EEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEE----CCSSCCCCEEEEECCSSSSCEEEEEETT-T
T ss_pred e---EEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEE----ccCCcceEEEEEccCCCCcceEEEEcCC-c
Confidence 3 355668887777777788888887764221111100000000 01233567899999999 88888864 4
Q ss_pred cEE
Q 019103 313 KLY 315 (346)
Q Consensus 313 ~l~ 315 (346)
.+.
T Consensus 411 ~~~ 413 (420)
T 3vl1_A 411 FCA 413 (420)
T ss_dssp EEE
T ss_pred eEE
Confidence 443
No 170
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.74 E-value=2.9e-06 Score=81.42 Aligned_cols=210 Identities=15% Similarity=0.164 Sum_probs=125.1
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEE--EEecc--CCCeeEEEEEEeC-----CEE
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVE--AINQM--EGSYFGEGLTLLG-----EKL 162 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~--~~~~l--~~~~FgeGit~~g-----~~L 162 (346)
+++++.+- -..| .|+++++||+||++.- + .+|.++| +|+.. ..+++ .......||+++. +.|
T Consensus 22 ~~~~va~~--l~~P--~~ia~~pdG~l~V~e~--~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~l 92 (352)
T 2ism_A 22 RVEEVVGG--LEVP--WALAFLPDGGMLIAER--P-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYV 92 (352)
T ss_dssp CEEEEECC--CSCE--EEEEECTTSCEEEEET--T-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEE
T ss_pred EEEEEECC--CCCc--eEEEEcCCCeEEEEeC--C-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEE
Confidence 55665541 1234 6999999999999964 2 5999999 55532 22221 1223356788875 499
Q ss_pred EEEEeeC-----CEEEEEECCCC-----c-EEEEEec--C---CCceeEEeeCCCEEEEECCC--------------CeE
Q 019103 163 FQVTWLQ-----KTGFIYDQNNL-----N-KLEEFTH--Q---MKDGWGLATDGKVLFGSDGS--------------SML 212 (346)
Q Consensus 163 Y~ltw~~-----~~v~V~D~~tl-----~-~i~ti~~--~---~peGwGLt~Dg~~LyvSdGs--------------~~l 212 (346)
|++.... +.|..++.+.. + ++..++. + .+.+..+.+|| +||+++|+ .+|
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I 171 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKI 171 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEE
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEE
Confidence 9998765 78999997743 2 2333552 1 35677788898 79999863 478
Q ss_pred EEEeCCCCcE-------------EEEEEeccCCeeeeeceeeEee--CCEEEEEecCCCe--------EEEEeCCCCeEE
Q 019103 213 YQIDPQTLKV-------------IRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTDC--------IARISHEDGVVL 269 (346)
Q Consensus 213 ~vIDp~T~kv-------------i~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~--------I~vID~~TG~Vv 269 (346)
..||+.. ++ ...+..+ +.+.+.+.+. +|+||++....+. |.+|.+.. --
T Consensus 172 ~ri~~dG-~~p~~npf~~~~~~~~~i~a~G-----~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~--ny 243 (352)
T 2ism_A 172 LRLTPEG-EPAPGNPFLGRRGARPEVYSLG-----HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGG--NY 243 (352)
T ss_dssp EEECTTS-SBCTTCTTTTCTTSCTTEEEEC-----CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTC--BC
T ss_pred EEEcCCC-CCCCCCcccCCCCCCccEEEEc-----CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCC--cC
Confidence 8888764 11 0011111 2344557666 5799987766554 66665422 00
Q ss_pred EEE------ECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeecc
Q 019103 270 GWV------LLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMK 323 (346)
Q Consensus 270 ~~I------~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~ 323 (346)
+|= ..++..+ +...++....|.|||+. +..+||+.-.-.+|+.|++..-.
T Consensus 244 Gwp~~~g~~~~~~~~~--p~~~~~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 244 GWPRVVGRGNDPRYRD--PLYFWPQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp CTTTCCSCCCCTTSCC--CSEECTTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEET
T ss_pred CCCcccCCCCCCCCcC--CeEecCCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCC
Confidence 000 0000000 00001223468999994 45899998888899999987543
No 171
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.74 E-value=8.9e-07 Score=80.30 Aligned_cols=205 Identities=8% Similarity=0.012 Sum_probs=132.4
Q ss_pred EEEEecCCCCcceeEEEecC---CEEEEEcCCCCCCeEEEEECCCCc-EEEEeccCCCeeEEEEE--------EeCCEEE
Q 019103 96 VNEFPHDPRAFTQGLLYAEN---DTLFESTGLYGRSSVRRVALETGK-VEAINQMEGSYFGEGLT--------LLGEKLF 163 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d---~~LyeStGlyg~s~V~~iDl~Tgk-v~~~~~l~~~~FgeGit--------~~g~~LY 163 (346)
+..+.|... ...+.|+++ +.++.+.+ .+..|++||+.+++ .+..+.-.... -..+. .+++.|+
T Consensus 59 ~~~~~~~~~--v~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~s~~~~~l~ 133 (357)
T 3i2n_A 59 LREIEKAKP--IKCGTFGATSLQQRYLATGD--FGGNLHIWNLEAPEMPVYSVKGHKEI-INAIDGIGGLGIGEGAPEIV 133 (357)
T ss_dssp EEEEEESSC--EEEEECTTCCTTTCCEEEEE--TTSCEEEECTTSCSSCSEEECCCSSC-EEEEEEESGGGCC-CCCEEE
T ss_pred eeeecccCc--EEEEEEcCCCCCCceEEEec--CCCeEEEEeCCCCCccEEEEEecccc-eEEEeeccccccCCCccEEE
Confidence 444566322 378999987 56666656 45699999999987 55555432221 12232 2344444
Q ss_pred EEEeeCCEEEEEECCCCc-EEEEEecC----CCceeEEe------eCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCC
Q 019103 164 QVTWLQKTGFIYDQNNLN-KLEEFTHQ----MKDGWGLA------TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKG 232 (346)
Q Consensus 164 ~ltw~~~~v~V~D~~tl~-~i~ti~~~----~peGwGLt------~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G 232 (346)
+.-.++.+.++|..+.+ .+.++... ...-+.+. +|++.|+++..++.|.++|.++.+........
T Consensus 134 -~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--- 209 (357)
T 3i2n_A 134 -TGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIK--- 209 (357)
T ss_dssp -EEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECS---
T ss_pred -EEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCC---
Confidence 44567899999999887 67777532 11334444 78999998877889999999999875443332
Q ss_pred eeeeeceeeEee----CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 233 REVRNLNELEFI----KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 233 ~pv~~lNELE~~----~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
.+ ++.+.+. ++..++....++.|.+.|..+++.+..+....+. ......+.++|+|+++.+++||
T Consensus 210 ~~---v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 210 NG---VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK--------AHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp SC---EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE--------CCSSCEEEEEEETTEEEEEEEE
T ss_pred Cc---eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC--------CCcCCEEEEEECCCCCcEEEEE
Confidence 12 2346665 5555555556889999999888765554321111 1123578899999998788888
Q ss_pred CCCCcEEEEEEe
Q 019103 309 KLWPKLYEINLR 320 (346)
Q Consensus 309 K~Wp~l~ev~l~ 320 (346)
-....|+--++.
T Consensus 279 ~~dg~i~iwd~~ 290 (357)
T 3i2n_A 279 GGAGGLHLWKYE 290 (357)
T ss_dssp ETTSEEEEEEEE
T ss_pred eCCCcEEEeecC
Confidence 888877666654
No 172
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.74 E-value=1.9e-06 Score=80.56 Aligned_cols=205 Identities=13% Similarity=0.114 Sum_probs=128.9
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc--CCCeeEEEEEE--eCCEEEEEEe
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM--EGSYFGEGLTL--LGEKLFQVTW 167 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l--~~~~FgeGit~--~g~~LY~ltw 167 (346)
.++.+.+++.-+......++|+|||.++.+++ .+..|++||+.+++......+ +...--..++. +++.|. +.-
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp~g~~las~~--~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~-s~s 80 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNPAGTLLASCG--GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA-SAS 80 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECTTSSCEEEEE--TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEE-EEE
T ss_pred cEEEeeeecCCCCCcEEEEEECCCCCEEEEEc--CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEE-EEE
Confidence 46788888632332346899999999888888 567999999999875544322 21111233444 445444 444
Q ss_pred eCCEEEEEECCCC--cEEEEEec-C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec-cCCeeeeeceeeE
Q 019103 168 LQKTGFIYDQNNL--NKLEEFTH-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR-YKGREVRNLNELE 242 (346)
Q Consensus 168 ~~~~v~V~D~~tl--~~i~ti~~-~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~-~~G~pv~~lNELE 242 (346)
.++.+.++|.++. +.+.++.- . .-....++|||+.|+....+++|.++|..+.+....+.+- .+..+ ++.+.
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~---v~~~~ 157 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD---VKHVV 157 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC---EEEEE
T ss_pred CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC---eEEEE
Confidence 5788888887655 44556642 1 1234557789999988777889999998776544433332 22222 23455
Q ss_pred ee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 243 FI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 243 ~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
+. +|.++|..-.++.|.+.|..+++.+....+.+ -....+.++|+|+++.|...+ ...+|
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~-----------h~~~v~~l~~sp~g~~l~s~s-~D~~v 218 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATLEG-----------HESTVWSLAFDPSGQRLASCS-DDRTV 218 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECC-----------CSSCEEEEEECTTSSEEEEEE-TTSCE
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecC-----------CCCceEEEEECCCCCEEEEEe-CCCeE
Confidence 54 56666665568889999998886543332211 123468899999998766554 33443
No 173
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.73 E-value=1e-06 Score=86.14 Aligned_cols=134 Identities=14% Similarity=0.193 Sum_probs=88.3
Q ss_pred eCCEEEEEECCC--CcEEEEEec---------CCCceeEEee--CCC-EEEEECC---CC--eEEEEeCCCCcEEEEEEe
Q 019103 168 LQKTGFIYDQNN--LNKLEEFTH---------QMKDGWGLAT--DGK-VLFGSDG---SS--MLYQIDPQTLKVIRKDIV 228 (346)
Q Consensus 168 ~~~~v~V~D~~t--l~~i~ti~~---------~~peGwGLt~--Dg~-~LyvSdG---s~--~l~vIDp~T~kvi~~I~V 228 (346)
..+.++++|+++ .+. .++.. ..|.|..+.. ||. +|||.|- .+ .|+.+|+++.....--.+
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 578888999873 222 22221 1456666655 454 7999873 23 466677765543322222
Q ss_pred ccCCeeeeeceeeEee-CCEEEEEe--cCC---------------CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCc
Q 019103 229 RYKGREVRNLNELEFI-KGEVWANV--WQT---------------DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGID 290 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~-~G~LyaNv--~~s---------------n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~ 290 (346)
.|.++..+|.+.++ +|.+|+++ |.+ ..|+++|+.+-+++ . .+ ..
T Consensus 160 --~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~--~--~~------------l~ 221 (355)
T 3sre_A 160 --RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV--A--EG------------FD 221 (355)
T ss_dssp --CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE--E--EE------------ES
T ss_pred --ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEe--e--cC------------Cc
Confidence 45788889998777 68999985 433 46889998532221 1 12 23
Q ss_pred eeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 291 VLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 291 vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
.|||||++||+++|||+.-.-.+|+...+.
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 789999999999999998888888888775
No 174
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.73 E-value=1.2e-05 Score=74.20 Aligned_cols=195 Identities=12% Similarity=0.065 Sum_probs=129.0
Q ss_pred EEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeC-CEEEEEEeeCCEEE
Q 019103 96 VNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG-EKLFQVTWLQKTGF 173 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g-~~LY~ltw~~~~v~ 173 (346)
+.++.. .......+.|++|+.++.+++ .+..|++||+.+|+.+..+.-. ..... ++... +.+.++.-.++.+.
T Consensus 58 ~~~~~~-h~~~v~~~~~s~dg~~l~s~s--~D~~v~~wd~~~~~~~~~~~~h~~~v~~--~~~~~~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSFKG-HSHIVQDCTLTADGAYALSAS--WDKTLRLWDVATGETYQRFVGHKSDVMS--VDIDKKASMIISGSRDKTIK 132 (319)
T ss_dssp EEEEEC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEE--EEECTTSCEEEEEETTSCEE
T ss_pred ceEEeC-CcccEEEEEECCCCCEEEEEe--CCCEEEEEECCCCCeeEEEccCCCcEEE--EEEcCCCCEEEEEeCCCeEE
Confidence 444542 233447899999998888877 5669999999999987776532 33333 44432 33444555678999
Q ss_pred EEECCCCcEEEEEec-C-CCceeEEee------CCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-
Q 019103 174 IYDQNNLNKLEEFTH-Q-MKDGWGLAT------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI- 244 (346)
Q Consensus 174 V~D~~tl~~i~ti~~-~-~peGwGLt~------Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~- 244 (346)
++|.+. +.+.++.. . .-....+.+ |+..++.+..++.|.++|.++++...++.-.. .+ ++.+.+.
T Consensus 133 vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~--~~---v~~~~~sp 206 (319)
T 3frx_A 133 VWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN--SN---INTLTASP 206 (319)
T ss_dssp EEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC--SC---EEEEEECT
T ss_pred EEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC--Cc---EEEEEEcC
Confidence 999864 44444432 1 112223444 34466666668899999999988776554321 22 3345555
Q ss_pred CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 245 KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 245 ~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
+|+..|..-.++.|.+-|..+++.+.++... +..+.+||+|++..|..+...--++|
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------~~v~~~~~sp~~~~la~~~~~~i~v~ 263 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--------------DEVFSLAFSPNRYWLAAATATGIKVF 263 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECC--------------SCEEEEEECSSSSEEEEEETTEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCC--------------CcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 6777777777899999999999998888541 13578999999998887765433333
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.73 E-value=8.7e-07 Score=82.36 Aligned_cols=191 Identities=15% Similarity=0.091 Sum_probs=108.0
Q ss_pred CCeEEEEECCCCcEEEEeccCCCeeEEEEEE-eCCEEEEEEee-----CCEEEEEECCCCcEEEEEecCCC-c---eeEE
Q 019103 127 RSSVRRVALETGKVEAINQMEGSYFGEGLTL-LGEKLFQVTWL-----QKTGFIYDQNNLNKLEEFTHQMK-D---GWGL 196 (346)
Q Consensus 127 ~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~-~g~~LY~ltw~-----~~~v~V~D~~tl~~i~ti~~~~p-e---GwGL 196 (346)
...|.++|+++|+......-+.......+++ +|++|+.+... ...++++|.++.+. ..+..... + ...+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFW 245 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEE
T ss_pred cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceE
Confidence 4789999999998765554444444445666 67766554433 45899999876543 23322211 1 2357
Q ss_pred eeCCCEE-EEEC--CCC--eEEEEeCCCCcEEEEEEeccCCeeeeece--eeEeeCCEEEEEe--------cCCCeEEEE
Q 019103 197 ATDGKVL-FGSD--GSS--MLYQIDPQTLKVIRKDIVRYKGREVRNLN--ELEFIKGEVWANV--------WQTDCIARI 261 (346)
Q Consensus 197 t~Dg~~L-yvSd--Gs~--~l~vIDp~T~kvi~~I~V~~~G~pv~~lN--ELE~~~G~LyaNv--------~~sn~I~vI 261 (346)
+|||++| |+++ +.. .|+++|+++.+...-.............. .+..++.+|++.. .....|.++
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 8999976 7676 333 49999999988643222211000000011 1233344555433 445689999
Q ss_pred eCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec--CCCCcEEEEEEee
Q 019103 262 SHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG--KLWPKLYEINLRE 321 (346)
Q Consensus 262 D~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG--K~Wp~l~ev~l~~ 321 (346)
|+++|++.....-..-...+.. ........++|+||+++|+.+. ...+.||.+.|.+
T Consensus 326 d~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 326 NMKNGTQHRVARHDTSWKVFEG---DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp ETTTTEEEEEEECCCCCCCBTT---BSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred eccCCceEEeccccCccccccc---ccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 9999987443322110000000 0001235689999999988765 3578899998753
No 176
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.72 E-value=2.9e-06 Score=86.79 Aligned_cols=203 Identities=11% Similarity=0.019 Sum_probs=136.6
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCC-cEEEEeccCCCeeEEEEEEeC--CEEEEEEeeC
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETG-KVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQ 169 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tg-kv~~~~~l~~~~FgeGit~~g--~~LY~ltw~~ 169 (346)
+.+.++. |. .....+.+++++..+.+++ .+..|++||+.++ +......-... ....++... +..+++.-.+
T Consensus 88 ~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~--~dg~i~vw~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 88 EKVVDFEAHP--DYIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEH-FVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp CEEEEEECCS--SCEEEEEECSSSSEEEEEE--TTSEEEEEEGGGTSEEEEEEECCSS-CEEEEEEETTEEEEEEEEETT
T ss_pred cEEEEEecCC--CCEEEEEEeCCCCEEEEEc--CCCEEEEEECCCCceEEEEEcCCCC-cEEEEEEEcCCCCEEEEEeCC
Confidence 3455555 42 3347999999997666655 4569999999998 44444432222 234455543 4566666778
Q ss_pred CEEEEEECCCCcEEEEEecCC---CceeEEee--CCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee
Q 019103 170 KTGFIYDQNNLNKLEEFTHQM---KDGWGLAT--DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~ti~~~~---peGwGLt~--Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~ 244 (346)
+.+.++|..+.+...++.... .....+++ |+..|+++..++.|.++|..+.+.+.++.... .++ ..+.+.
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~v---~~~~~~ 237 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM--SNV---SFAVFH 237 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS--SCE---EEEEEC
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC--CCE---EEEEEc
Confidence 999999999888888776531 23344566 88999998888999999999999887776432 222 234454
Q ss_pred -CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 245 -KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 245 -~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+|.+++....++.|.+.|+.+++.+..+... ......++++|+++.++++....+.+..+++
T Consensus 238 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 238 PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG-------------LERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp SSSSEEEEEETTSCEEEEETTTCSEEEEECCS-------------SSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEeecC-------------CCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 5655666656889999999999998888541 1245678888888765444334555555543
No 177
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.71 E-value=9.1e-07 Score=89.86 Aligned_cols=174 Identities=14% Similarity=0.054 Sum_probs=106.6
Q ss_pred CCCeEEEEECCCCcEEEEecc-CCCee--EEEEEEeCCEEEEEEeeC----CEEEEEECCCCcEEEEEecC-C------C
Q 019103 126 GRSSVRRVALETGKVEAINQM-EGSYF--GEGLTLLGEKLFQVTWLQ----KTGFIYDQNNLNKLEEFTHQ-M------K 191 (346)
Q Consensus 126 g~s~V~~iDl~Tgkv~~~~~l-~~~~F--geGit~~g~~LY~ltw~~----~~v~V~D~~tl~~i~ti~~~-~------p 191 (346)
+...|.+||+++++....... +.... ....+++|+.|+...... ..++++|.++++...++..+ . .
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 446899999999986544322 12222 233344677788765433 38999999998544444321 1 1
Q ss_pred ceeEEee--CCCEEEEEC--CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEEecCCC----eEEEE
Q 019103 192 DGWGLAT--DGKVLFGSD--GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWANVWQTD----CIARI 261 (346)
Q Consensus 192 eGwGLt~--Dg~~LyvSd--Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn----~I~vI 261 (346)
....+++ ||+.||+++ |...|+.+|.. .+.+..+.-+. .++.. .+.+. +++||+.....+ .|.++
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~-~~~~~~l~~~~--~~v~~--~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT-GRLIRQVTKGE--WEVTN--FAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETT-SCEEEECCCSS--SCEEE--EEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECC-CCEEEecCCCC--eEEEe--eeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 3457899 999999886 46688888854 44444443322 22211 12333 447887665554 89999
Q ss_pred eCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC---CcEEEEEE
Q 019103 262 SHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW---PKLYEINL 319 (346)
Q Consensus 262 D~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W---p~l~ev~l 319 (346)
|.+++++ ..+.- ....+.++|+|+++.+.++.... +.+|.+++
T Consensus 388 d~~~~~~-~~l~~--------------~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 388 DIKGGKT-KDLTP--------------ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp ETTCCCC-EESCC--------------SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EcCCCCc-eeccC--------------CCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 9999873 22210 11357899999999988775544 33555543
No 178
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.69 E-value=1.7e-06 Score=80.97 Aligned_cols=163 Identities=13% Similarity=0.145 Sum_probs=106.5
Q ss_pred cCCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECCCCcEEEEEecC---CCceeEEeeCCCEEEEE-CCCCeEEEEeCCC
Q 019103 146 MEGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGS-DGSSMLYQIDPQT 219 (346)
Q Consensus 146 l~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~---~peGwGLt~Dg~~LyvS-dGs~~l~vIDp~T 219 (346)
+..+++| ++.+ +++||++++.++.++.+|++ ++++++++.+ -+||.++..+|. +|++ ++.+.|++++..+
T Consensus 25 ~~~~lSG--la~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 25 ITNNISS--LTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLTP 100 (255)
T ss_dssp CCSCEEE--EEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEECT
T ss_pred cccCcce--eEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcCC
Confidence 3356655 5665 68999999999999999998 9999999873 457666665664 5565 5788999987544
Q ss_pred Cc---EEEEEEeccCCeeeee-ceeeEee--CCEEEEEecCCC-eEEEEe--CCCCeEEEEEECCchhhhhhhccCCCCc
Q 019103 220 LK---VIRKDIVRYKGREVRN-LNELEFI--KGEVWANVWQTD-CIARIS--HEDGVVLGWVLLPNLRERLVAAGYNGID 290 (346)
Q Consensus 220 ~k---vi~~I~V~~~G~pv~~-lNELE~~--~G~LyaNv~~sn-~I~vID--~~TG~Vv~~I~l~~l~~~~~~~~~~~~~ 290 (346)
.. ++.++...-...+-.. +.-|.|. +++||+...... .|..++ +.+.. +..++-..+... ....
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~-l~i~~~~~~~~~------~~~~ 173 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE-LHISKDKALQRQ------FTLD 173 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC-CEEEECHHHHHT------CCSS
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc-eeeecchhhccc------cccC
Confidence 33 3444443210011000 1125565 459999888777 799998 22221 122221111111 1123
Q ss_pred eeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 291 VLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 291 vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
-+-||||||..++|||...-...|.++.+
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~ 202 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTL 202 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcC
Confidence 47899999999999999999999999876
No 179
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.69 E-value=1.4e-06 Score=84.38 Aligned_cols=172 Identities=13% Similarity=0.046 Sum_probs=111.3
Q ss_pred CeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeC--CEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEE
Q 019103 128 SSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ--KTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLF 204 (346)
Q Consensus 128 s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~--~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~Ly 204 (346)
..|.++|++++++.....-........++++|++|+.+.+.+ ..++++|.++.+...-.... ......++|||++|+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la 238 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA 238 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEE
Confidence 699999998765433333344455555566778888777654 69999999998876433332 224556889999887
Q ss_pred E-E--CCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecC--CCeEEEEeCCCCeEEEEEECCch
Q 019103 205 G-S--DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ--TDCIARISHEDGVVLGWVLLPNL 277 (346)
Q Consensus 205 v-S--dGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~--sn~I~vID~~TG~Vv~~I~l~~l 277 (346)
+ + ||...|+++|.++.+.. .+..++. ....+.+. || +|+..... ...|.++|.+++++. .+..
T Consensus 239 ~~~~~~g~~~i~~~d~~~~~~~---~l~~~~~---~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~--- 308 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDLASGQIR---QVTDGRS---NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITW--- 308 (415)
T ss_dssp EEECTTSSCEEEEEETTTCCEE---ECCCCSS---CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCC---
T ss_pred EEEecCCCceEEEEECCCCCEE---eCcCCCC---cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEec---
Confidence 4 4 35678999999998763 2222211 22345554 55 56655432 237999999999853 2211
Q ss_pred hhhhhhccCCCCceeeEEEEeCCCCEEEEecCC--CCcEEEEEE
Q 019103 278 RERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL--WPKLYEINL 319 (346)
Q Consensus 278 ~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~--Wp~l~ev~l 319 (346)
.......++|+|+++.|++++.. ...|+.+.+
T Consensus 309 ----------~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 309 ----------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp ----------SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred ----------CCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 11245679999999999988764 346666654
No 180
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.68 E-value=5.3e-06 Score=81.24 Aligned_cols=189 Identities=12% Similarity=0.164 Sum_probs=125.2
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEE
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~ 173 (346)
.+.++..... -..+++|++|++++.+.+ .+..|++||. +++.+....- .....+..+.++++. .++.-.++.+.
T Consensus 377 ~~~~~~~~~~-~v~~~~~s~dg~~l~~~~--~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~-l~~~~~d~~v~ 451 (577)
T 2ymu_A 377 LLQTLTGHSS-SVRGVAFSPDGQTIASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQT-IASASDDKTVK 451 (577)
T ss_dssp EEEEEECCSS-CEEEEEECTTSSCEEEEE--TTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEE
T ss_pred EEEEecCCCC-CeEEEEECCCCCEEEEEe--CCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCE-EEEEcCCCEEE
Confidence 3444442223 347999999998777766 4569999995 5666666543 333333333334444 44455678999
Q ss_pred EEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEE
Q 019103 174 IYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWA 250 (346)
Q Consensus 174 V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~Lya 250 (346)
++|. +.+.+.++... .-....++||++.|.++..+..|.++|. +.+.+.++.-.. .+ ++.+.+. ||+..|
T Consensus 452 ~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~--~~---v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 452 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SS---VRGVAFSPDGQTIA 524 (577)
T ss_dssp EEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCS--SC---EEEEEECTTSSCEE
T ss_pred EEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCC--CC---EEEEEEcCCCCEEE
Confidence 9995 56777777532 2245567899999998877889999995 677777665422 22 3346665 676666
Q ss_pred EecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 251 NVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 251 Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+.-.+..|.+-|. +|+.+.++.-. .....++||+|+++.|+.+|.
T Consensus 525 s~~~dg~v~lwd~-~~~~~~~~~~h-------------~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 525 SASDDKTVKLWNR-NGQLLQTLTGH-------------SSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECC-------------SSCEEEEEECTTSSCEEEEET
T ss_pred EEECcCEEEEEeC-CCCEEEEEcCC-------------CCCEEEEEEcCCCCEEEEEeC
Confidence 6666778999994 78888777421 124578999999988766554
No 181
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.68 E-value=1.7e-06 Score=78.44 Aligned_cols=221 Identities=10% Similarity=0.070 Sum_probs=138.9
Q ss_pred eeeEEEEEEecCCCCcceeEEEecC---C-E-EEEEcCCCCCCeEEEEECCCCcEEEEec------cCCCeeEEEEEEeC
Q 019103 91 YTIQVVNEFPHDPRAFTQGLLYAEN---D-T-LFESTGLYGRSSVRRVALETGKVEAINQ------MEGSYFGEGLTLLG 159 (346)
Q Consensus 91 ~t~~Vv~t~phd~~~FTqGL~~~~d---~-~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~------l~~~~FgeGit~~g 159 (346)
+.++.+..+..+...-...+.|+|+ + . ++.+++ ++.|++||..+++.+..+. .........+..++
T Consensus 5 ~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~---~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 81 (366)
T 3k26_A 5 YSFKCVNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVG---SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDS 81 (366)
T ss_dssp CCCEEEEEEECTTCSCEEEEEECTTCCTTSCEEEEEEE---TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECT
T ss_pred eEEEEEEEeecCCCCceEEEEEecccCCCCceEEEECC---CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCC
Confidence 4577777776444555579999973 3 3 554443 3499999999988766553 12345555555553
Q ss_pred ---CEEEEEEeeCCEEEEEECCCCcEEEEEec-C-CCceeEEee-CCCEEEEECCCCeEEEEeCCCCcEEEEEEe-ccCC
Q 019103 160 ---EKLFQVTWLQKTGFIYDQNNLNKLEEFTH-Q-MKDGWGLAT-DGKVLFGSDGSSMLYQIDPQTLKVIRKDIV-RYKG 232 (346)
Q Consensus 160 ---~~LY~ltw~~~~v~V~D~~tl~~i~ti~~-~-~peGwGLt~-Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V-~~~G 232 (346)
+.++++...++.+.++|..+.+.+.++.. . .-....+++ +++.|+....++.|.++|..+.+.+..+.. ..+.
T Consensus 82 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 82 NTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp TTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred CCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 35666667789999999999999999973 2 224445677 788888877788999999999988777642 1122
Q ss_pred eeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECC-chhhh---h---------h--hccCCCCceeeEEE
Q 019103 233 REVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLP-NLRER---L---------V--AAGYNGIDVLNGIA 296 (346)
Q Consensus 233 ~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~-~l~~~---~---------~--~~~~~~~~vlNGIA 296 (346)
.+ +..+.+. +|..++..-.++.|.+.|..+++.+..+... .+.+. + . ..........+.++
T Consensus 162 ~~---v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 162 DE---VLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SC---EEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred Cc---eeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 22 2345554 4555555556889999999988754332100 00000 0 0 00000234567899
Q ss_pred EeCCCCEEEEecCCCCcEEEEEEe
Q 019103 297 WDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 297 ~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
|+ ++ ++++|-..+.|.-.++.
T Consensus 239 ~~--~~-~l~~~~~d~~i~~wd~~ 259 (366)
T 3k26_A 239 WL--GD-LILSKSCENAIVCWKPG 259 (366)
T ss_dssp EE--TT-EEEEECSSSEEEEEEES
T ss_pred Ec--CC-EEEEEecCCEEEEEeCC
Confidence 98 44 56666667777666653
No 182
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.68 E-value=6.3e-06 Score=88.48 Aligned_cols=207 Identities=7% Similarity=-0.023 Sum_probs=135.7
Q ss_pred eeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC
Q 019103 91 YTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 91 ~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~ 170 (346)
+.+.....+-|... ...++|+||+.++.+.+ .+..|++||..+++......-...... ++...+++.++.-.++
T Consensus 6 ~~~~~~~~~gh~~~--V~~lafspdg~~lAsgs--~Dg~I~lw~~~~~~~~~~~~~~~~V~~--l~fspg~~L~S~s~D~ 79 (902)
T 2oaj_A 6 FSLAETNKYGMSSK--PIAAAFDFTQNLLAIAT--VTGEVHIYGQQQVEVVIKLEDRSAIKE--MRFVKGIYLVVINAKD 79 (902)
T ss_dssp EEEEEEEEEECSSC--EEEEEEETTTTEEEEEE--TTSEEEEECSTTCEEEEECSSCCCEEE--EEEETTTEEEEEETTC
T ss_pred eeeccccccCCCCC--cEEEEECCCCCEEEEEe--CCCEEEEEeCCCcEEEEEcCCCCCEEE--EEEcCCCEEEEEECcC
Confidence 45666667777443 37999999998777766 456999999999887665543333333 4443344444445689
Q ss_pred EEEEEECCCCcEEEEEecCC-CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec--------cCCeeeeeceee
Q 019103 171 TGFIYDQNNLNKLEEFTHQM-KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR--------YKGREVRNLNEL 241 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~~-peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~--------~~G~pv~~lNEL 241 (346)
.+.++|.++.+.+.++.... -....+++|+++|++...++.|.++|.++.+.. ...+. ..|+. ..++.+
T Consensus 80 ~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~-~~V~sl 157 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARL-SPIVSI 157 (902)
T ss_dssp EEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCC-CCCCEE
T ss_pred eEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCC-CCeEEE
Confidence 99999999999999997541 133446789999999888999999999998764 22220 01111 123456
Q ss_pred EeeC--CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccC-------CCCceeeEEEEeCCCCEEEEec
Q 019103 242 EFIK--GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGY-------NGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 242 E~~~--G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~-------~~~~vlNGIA~d~~~~~LfVTG 308 (346)
.+.. +.+.+.-..+..| +-|.++++.+.++... +.+... .+. ......+.++|+|+++.|...+
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYE-LPPFAP-GGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCC-BCTTCC-CSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecc-cCCcCC-CcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 6663 3555555667788 9999999999888542 110000 000 0013578999999987665544
No 183
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.67 E-value=1.2e-06 Score=80.73 Aligned_cols=204 Identities=12% Similarity=0.057 Sum_probs=130.7
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEec--------------cCCCeeEEEEEEe--CCEEEEEEee
Q 019103 106 FTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQ--------------MEGSYFGEGLTLL--GEKLFQVTWL 168 (346)
Q Consensus 106 FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~--------------l~~~~FgeGit~~--g~~LY~ltw~ 168 (346)
-...+.|+| ++.++.+++ .+..|++||+.+++...... ..... ..++.. ++.++++.-.
T Consensus 45 ~v~~~~~s~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGG--SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV--ETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CEEEEEECTTTCCEEEEEE--TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE--EEEEECTTCTTCEEEEET
T ss_pred cEEEEEEecCCCCEEEEEc--CCCeEEEEECCCCcccceEeccccccccccccccCCCcE--EEEEEccCCCcEEEEEeC
Confidence 347899999 888777777 45699999999986543332 12222 334443 4445666667
Q ss_pred CCEEEEEECCCCcEEEEEecC-CCceeEEee---CCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee
Q 019103 169 QKTGFIYDQNNLNKLEEFTHQ-MKDGWGLAT---DGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (346)
Q Consensus 169 ~~~v~V~D~~tl~~i~ti~~~-~peGwGLt~---Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~ 244 (346)
++.+.++|..+.+.+..+... ......+++ ++..++++..++.|.++|.++.+.+.++.-.. .+ ++.+.+.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~---v~~~~~~ 195 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR--QE---ILAVSWS 195 (408)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC--SC---EEEEEEC
T ss_pred CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC--Cc---EEEEEEC
Confidence 899999999999999999865 123334455 44577777778899999999988877665422 22 2345555
Q ss_pred -CC-EEEEEecCCCeEEEEeCCCCe-EEEEEECCchhhh--hhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 245 -KG-EVWANVWQTDCIARISHEDGV-VLGWVLLPNLRER--LVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 245 -~G-~LyaNv~~sn~I~vID~~TG~-Vv~~I~l~~l~~~--~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
++ ++++..-.++.|.+.|..+++ .+..++...-... ............++++|+|+++.|++.+. .+.++-.++
T Consensus 196 ~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~ 274 (408)
T 4a11_B 196 PRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT-DNRMRLWNS 274 (408)
T ss_dssp SSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET-TSCEEEEET
T ss_pred CCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC-CCeEEEEEC
Confidence 34 477766678899999999876 4444422110000 00000122346788999999888776654 445554444
No 184
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.67 E-value=6.5e-07 Score=81.25 Aligned_cols=194 Identities=9% Similarity=0.001 Sum_probs=125.1
Q ss_pred eeEEEecC----CEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 108 QGLLYAEN----DTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 108 qGL~~~~d----~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
..+.++++ +.++.+++ .+..|.+||+.+++.+..+.- ........+...++.++++.-.++.+.++|..+.+.
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAG--SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEE--TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEeccCCCCCCCEEEEec--CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 68999988 66777766 456999999999999888763 333333323331344555556689999999999999
Q ss_pred EEEEe----cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec------------------------cCCe
Q 019103 183 LEEFT----HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR------------------------YKGR 233 (346)
Q Consensus 183 i~ti~----~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~------------------------~~G~ 233 (346)
+..+. +. ......+++|++.|+++..++.|.++|..+.+....+... ..+.
T Consensus 151 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T 3k26_A 151 VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIH 230 (366)
T ss_dssp EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSC
T ss_pred EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCC
Confidence 99883 22 2234456788999988877889999999987654332210 0000
Q ss_pred eeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeE--------------EEEEECCchhhhhhhccCCCCceeeEEEEeC
Q 019103 234 EVRNLNELEFIKGEVWANVWQTDCIARISHEDGVV--------------LGWVLLPNLRERLVAAGYNGIDVLNGIAWDS 299 (346)
Q Consensus 234 pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~V--------------v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~ 299 (346)
-..++.+.+. |..++..-.++.|.+.|..+++. +..+... ....+.++|+|
T Consensus 231 -~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~ 295 (366)
T 3k26_A 231 -RNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS-------------QCDIWYMRFSM 295 (366)
T ss_dssp -SSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS-------------SCCSSCCCCEE
T ss_pred -cceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccccc-------------CCcEEEEEEcC
Confidence 0123345555 44455555688899999888743 4444221 12346788999
Q ss_pred C--CCEEEEecCCCCcEEEEEE
Q 019103 300 N--RNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 300 ~--~~~LfVTGK~Wp~l~ev~l 319 (346)
+ ++.|++. -..+.|+--++
T Consensus 296 ~~~~~~l~~~-~~dg~i~vwd~ 316 (366)
T 3k26_A 296 DFWQKMLALG-NQVGKLYVWDL 316 (366)
T ss_dssp CTTSSEEEEE-CTTSCEEEEEC
T ss_pred CCCCcEEEEE-ecCCcEEEEEC
Confidence 8 6655544 45566655554
No 185
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.67 E-value=4.4e-06 Score=84.51 Aligned_cols=185 Identities=14% Similarity=0.066 Sum_probs=129.0
Q ss_pred cceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 106 FTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 106 FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
....+.|+|++. ++.+++ .+..|++||..+++....+.-. .......+.++++ ++++.-.++.+.++|..+.+.+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s--~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~~ 225 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGS--DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKT 225 (611)
T ss_dssp CEEEEEECSSSSCEEEEEE--TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEE
T ss_pred CceEEEECCCCCeEEEEEe--CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcEe
Confidence 446889999875 577777 5679999999999877765432 2233333333444 5555567899999999999998
Q ss_pred EEEe--------cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecC
Q 019103 184 EEFT--------HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQ 254 (346)
Q Consensus 184 ~ti~--------~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~ 254 (346)
.++. +. .-....++|||+.|..+..+++|.++|.++++.+.++..+.. .. .....+.+ ++...+....
T Consensus 226 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~l~s~s~ 302 (611)
T 1nr0_A 226 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR-IE-DQQLGIIW-TKQALVSISA 302 (611)
T ss_dssp EECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-GG-GCEEEEEE-CSSCEEEEET
T ss_pred eeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC-cc-ceeEEEEE-cCCEEEEEeC
Confidence 8884 22 124456788999998877788999999999999998887531 00 01111333 5555666667
Q ss_pred CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 255 TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 255 sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
.+.|.+.|+++++.+..+.- + ....+.+||+|+++.|+.++.
T Consensus 303 d~~i~~~~~~~~~~~~~~~g---------h----~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 303 NGFINFVNPELGSIDQVRYG---------H----NKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp TCCEEEEETTTTEEEEEECC---------C----SSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEeCCCCCcceEEcC---------C----CCCEEEEEEeCCCCEEEEEeC
Confidence 88999999999987655411 1 134688999999998877654
No 186
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.67 E-value=6.8e-07 Score=84.46 Aligned_cols=181 Identities=10% Similarity=0.047 Sum_probs=121.6
Q ss_pred ceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEec--c-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 107 TQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQ--M-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 107 TqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~--l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
...+.+++++ .++.+++ .+..|.+||+.+++.+..+. - ........+..+++.| ++.-.++.+.++|..+.+.
T Consensus 134 v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAG--CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI-CTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp EEEEEECSSBTTEEEEEE--TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE-EEEETTSEEEEEETTTTEE
T ss_pred EEEEEECcCCCCEEEEEc--CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE-EEEecCCcEEEEeCCCCce
Confidence 4789999987 5777777 45699999999999888873 2 2333332233334444 4455789999999999999
Q ss_pred EEEEec--CC--CceeEEeeCCCEEEEE---CCCCeEEEEeCCCCcE-EEEEEeccCCeeeeeceeeEee--CCEEEEEe
Q 019103 183 LEEFTH--QM--KDGWGLATDGKVLFGS---DGSSMLYQIDPQTLKV-IRKDIVRYKGREVRNLNELEFI--KGEVWANV 252 (346)
Q Consensus 183 i~ti~~--~~--peGwGLt~Dg~~LyvS---dGs~~l~vIDp~T~kv-i~~I~V~~~G~pv~~lNELE~~--~G~LyaNv 252 (346)
+.++.. .. .....+++|++.|++. ..++.|.++|..+++. +........ .. +..+.+. +..|++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~---v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS-SG---VLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC-SS---CEEEEEETTTTEEEEEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC-Cc---eeEEEEcCCCCEEEEEE
Confidence 999832 21 3455678898888886 5688999999998765 333333222 11 2235555 34677777
Q ss_pred cCCCeEEEEeCCCCeE-EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEE
Q 019103 253 WQTDCIARISHEDGVV-LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIF 305 (346)
Q Consensus 253 ~~sn~I~vID~~TG~V-v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~Lf 305 (346)
..++.|.+.|..+++. +..+.. . .......+++|+|++..+.
T Consensus 287 ~~dg~i~i~d~~~~~~~~~~l~~--~---------~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 287 KGDSSIRYFEITSEAPFLHYLSM--F---------SSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp TTCSCEEEEEECSSTTCEEEEEE--E---------CCSSCCSEEEECCGGGSCG
T ss_pred cCCCeEEEEEecCCCcceEeecc--c---------ccCCcccceEEecccccce
Confidence 6688999999999883 333321 1 1123568899999887543
No 187
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.67 E-value=4.9e-07 Score=78.95 Aligned_cols=186 Identities=11% Similarity=0.093 Sum_probs=111.7
Q ss_pred ceeEEEecCCEEEEEcC--CCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCC--EEEEEECCCCcE
Q 019103 107 TQGLLYAENDTLFESTG--LYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQK--TGFIYDQNNLNK 182 (346)
Q Consensus 107 TqGL~~~~d~~LyeStG--lyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~--~v~V~D~~tl~~ 182 (346)
...+.+++|++.+.... ..+...|..+|..+++. ..+......+...+.++++.|+.+...++ .++.+|..+.+.
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 36799999985333333 22467899999988874 33333333444444556778887766677 466666776655
Q ss_pred EEEEecC-CCceeEEeeCCCEEEEE---CCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecC--
Q 019103 183 LEEFTHQ-MKDGWGLATDGKVLFGS---DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQ-- 254 (346)
Q Consensus 183 i~ti~~~-~peGwGLt~Dg~~LyvS---dGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~-- 254 (346)
..-.... ......+++||+.|+++ |+...|+.+|+.+.++ ..+ ...... ...+.+. +| +|++....
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~-~~~--~~~~~~---~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV-ERI--TDSAYG---DWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE-EEC--CCCSEE---EEEEEECTTSSEEEEEEEETT
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc-EEE--ecCCcc---cCCeEECCCCCEEEEEEcCCC
Confidence 3322222 23455678999988764 3567888888766554 222 222222 2234444 44 55544332
Q ss_pred --------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 255 --------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 255 --------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
...|.++|.++++......+.+- ......++|+|+++.|++++..
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGG-----------QGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEES-----------TTTSCSCCBCTTSSEEEEEEEC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCC-----------CcccccceECCCCCEEEEEEec
Confidence 25699999999986544432110 1124568899999999887654
No 188
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.66 E-value=1.8e-06 Score=80.23 Aligned_cols=191 Identities=14% Similarity=0.116 Sum_probs=117.5
Q ss_pred EEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe-eEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEe
Q 019103 110 LLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGSY-FGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFT 187 (346)
Q Consensus 110 L~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~-FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~ 187 (346)
..++|||+ |+.++...|...|.++|+++|+.......+... ++..+++++++|+.+.. ++.++++|.++++....+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD-GRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET-TTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC-CCeEEEEECCCCcceeeee
Confidence 67899995 444443346668999999999877655444322 24446778888887763 4789999999998776655
Q ss_pred cCCC----ceeEEeeCCCEEEEE----------------------CCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 188 HQMK----DGWGLATDGKVLFGS----------------------DGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 188 ~~~p----eGwGLt~Dg~~LyvS----------------------dGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
.+.. ..|.+++||+.++.. +....|+++|+++.+...-..- . + .++.+
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~----~~~~~ 193 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-N-Q----WLGHP 193 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-S-S----CEEEE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-C-c----ccccc
Confidence 4311 224457899887642 1347899999999876433222 1 1 12233
Q ss_pred Eee--CC-EE-EEEecC----CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEE-EEecCC-C
Q 019103 242 EFI--KG-EV-WANVWQ----TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRI-FVTGKL-W 311 (346)
Q Consensus 242 E~~--~G-~L-yaNv~~----sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~L-fVTGK~-W 311 (346)
.+. || +| |+.... ...|.++|++++++.... . ..........+|+|++++| |++... +
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~---------~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 194 IYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK---T---------HAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp EEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC---C---------CCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred EECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee---e---------CCCCcccccceECCCCCEEEEEecCCCC
Confidence 343 34 44 444322 448999999887642211 1 0111234578999999977 555432 2
Q ss_pred Cc--EEEEEE
Q 019103 312 PK--LYEINL 319 (346)
Q Consensus 312 p~--l~ev~l 319 (346)
+. ||.+.+
T Consensus 262 ~~~~l~~~d~ 271 (388)
T 3pe7_A 262 PDRFIYSADP 271 (388)
T ss_dssp CCEEEEEECT
T ss_pred CcceEEEEec
Confidence 33 776654
No 189
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.65 E-value=2.1e-06 Score=77.99 Aligned_cols=181 Identities=9% Similarity=0.062 Sum_probs=119.7
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE-eCCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTL-LGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~-~g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
....+.+++++.||+++. ...|..+|.+ |+......++...+ ..+.. .++.||+.+ +.++.+| .+.+.+.
T Consensus 138 ~~~~~~~~~~g~l~vgt~---~~~l~~~d~~-g~~~~~~~~~~~~~-~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSN---DNYLYAINPD-GTEKWRFKTNDAIT-SAASIGKDGTIYFGS---DKVYAIN-PDGTEKW 208 (330)
T ss_dssp CCSCCEECTTSCEEEECT---TSEEEEECTT-SCEEEEEECSSCCC-SCCEECTTCCEEEES---SSEEEEC-TTSCEEE
T ss_pred eeeeeEEcCCCEEEEEcC---CCEEEEECCC-CCEeEEEecCCCce-eeeEEcCCCEEEEEe---CEEEEEC-CCCcEEE
Confidence 346777887889999874 3589999999 98887777654332 23445 367899999 8899999 7888877
Q ss_pred EEecCCCceeEEeeCCC-EEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEe
Q 019103 185 EFTHQMKDGWGLATDGK-VLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARIS 262 (346)
Q Consensus 185 ti~~~~peGwGLt~Dg~-~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID 262 (346)
++..+...-..+..|.+ .||++..++.|+.+|+ +.+.+.+...... . .+.+... +|.||+... .+.|.++|
T Consensus 209 ~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~--~---~~~~~~~~~g~l~v~t~-~ggl~~~d 281 (330)
T 3hxj_A 209 NFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKR--I---ESSPVIGNTDTIYFGSY-DGHLYAIN 281 (330)
T ss_dssp EECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSC--C---CSCCEECTTSCEEEECT-TCEEEEEC
T ss_pred EEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCC--c---cccceEcCCCeEEEecC-CCCEEEEC
Confidence 77654222233444433 7888766678999996 5566555554321 1 1123334 789998764 45899999
Q ss_pred CCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 263 HEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 263 ~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
+ +|+.+..+.+++ ...+.++.++++ +|||+.. .+.++-..
T Consensus 282 ~-~g~~~~~~~~~~-------------~~~~~~~~d~~g-~l~~gt~-~G~~~~~~ 321 (330)
T 3hxj_A 282 P-DGTEKWNFETGS-------------WIIATPVIDENG-TIYFGTR-NGKFYALF 321 (330)
T ss_dssp T-TSCEEEEEECSS-------------CCCSCCEECTTC-CEEEECT-TSCEEEEE
T ss_pred C-CCcEEEEEEcCC-------------ccccceEEcCCC-EEEEEcC-CCeEEEEe
Confidence 7 899888776521 234567787665 5777543 45555443
No 190
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.9e-06 Score=77.34 Aligned_cols=197 Identities=9% Similarity=0.025 Sum_probs=123.9
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECC--CCcEEEEeccCCCeeEEEEEEe----CCEEEEEEeeCCEEEEEECCCC
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALE--TGKVEAINQMEGSYFGEGLTLL----GEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~--Tgkv~~~~~l~~~~FgeGit~~----g~~LY~ltw~~~~v~V~D~~tl 180 (346)
...+.|++++.++.+++ .+..|++||+. +++.+..+.-.... -..++.. ++.|+ +.-.++.+.++|..+.
T Consensus 14 v~~~~~s~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGP-VWRVDWAHPKFGTILA-SCSYDGKVLIWKEENG 89 (379)
T ss_dssp EEEEEECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSC-EEEEEECCGGGCSEEE-EEETTSCEEEEEEETT
T ss_pred EEEEEEcCCCCEEEEEE--CCCcEEEEecCCCcceeeeEecCCCCc-EEEEEeCCCCCCCEEE-EeccCCEEEEEEcCCC
Confidence 37899999998777766 45699999998 44555544322221 2334443 34444 4455789999999988
Q ss_pred c--EEEEEecC--CCceeEEeeC--CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee----------
Q 019103 181 N--KLEEFTHQ--MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI---------- 244 (346)
Q Consensus 181 ~--~i~ti~~~--~peGwGLt~D--g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~---------- 244 (346)
+ .+..+... .-....++++ ++.|+++..++.|.++|..+.+....+....+..++ +.+.+.
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV---NSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE---EEEEECCCC-------
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce---EEEEEcCccccccccc
Confidence 7 55555432 1234456777 888888888899999999888655555443332332 234444
Q ss_pred ----CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCC--CEEEEecCCCCcEEEEE
Q 019103 245 ----KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR--NRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 245 ----~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~--~~LfVTGK~Wp~l~ev~ 318 (346)
++..++..-.+..|.+.|..+++....+.. .+. ......+.++|+|++ ..++++|-..+.|.--.
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~--------~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-TLE--------GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEE-EEC--------CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE-EEe--------cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 366666666688899999888763322211 111 012356889999995 55666666666655544
Q ss_pred E
Q 019103 319 L 319 (346)
Q Consensus 319 l 319 (346)
+
T Consensus 238 ~ 238 (379)
T 3jrp_A 238 Q 238 (379)
T ss_dssp E
T ss_pred C
Confidence 4
No 191
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.63 E-value=3.9e-06 Score=79.05 Aligned_cols=212 Identities=10% Similarity=-0.001 Sum_probs=128.9
Q ss_pred EEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCC-CcEEEEecc--------CCCeeEEEEEEeCCEEEEEEe
Q 019103 97 NEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALET-GKVEAINQM--------EGSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 97 ~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~T-gkv~~~~~l--------~~~~FgeGit~~g~~LY~ltw 167 (346)
+.+..........+.+++++.++.++ .+..|.+||+.+ ++....+.+ ........+.+++..++++.-
T Consensus 170 ~~~~~~h~~~v~~~~~~~~~~~l~s~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 170 RIFANAHTYHINSISINSDYETYLSA---DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp EEECSCCSSCCCEEEECTTSSEEEEE---CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE
T ss_pred EEeccCCCcceEEEEEcCCCCEEEEe---CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe
Confidence 34433334445799999999877774 367999999994 555554321 122223222333424555555
Q ss_pred eCCEEEEEECCCCcE----EEEEecCC--------------CceeEEeeCCCEEEEECCCCeEEEEeCCC-CcEEEEEEe
Q 019103 168 LQKTGFIYDQNNLNK----LEEFTHQM--------------KDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIV 228 (346)
Q Consensus 168 ~~~~v~V~D~~tl~~----i~ti~~~~--------------peGwGLt~Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V 228 (346)
.++.+.++|..+.+. +..+.... -....+++||+.|..+.. +.|.++|..+ .+.+.++..
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES
T ss_pred CCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec
Confidence 689999999999886 66665421 134457789999988766 9999999987 777666665
Q ss_pred ccCCeeeee------------ceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCch--hhhhhh----------
Q 019103 229 RYKGREVRN------------LNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNL--RERLVA---------- 283 (346)
Q Consensus 229 ~~~G~pv~~------------lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l--~~~~~~---------- 283 (346)
... .... ...+.+. +|...+..-.++.|.+.|..+++++. +....- ++....
T Consensus 326 ~~~--~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 402 (447)
T 3dw8_B 326 HEY--LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGK 402 (447)
T ss_dssp CGG--GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSC
T ss_pred ccc--ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCC
Confidence 321 0000 0114444 45544666678999999999999873 222110 000000
Q ss_pred --------ccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 284 --------AGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 284 --------~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
.......-...+||+|+++.|.++..+--.+|
T Consensus 403 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~ 442 (447)
T 3dw8_B 403 RKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIF 442 (447)
T ss_dssp CCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEE
T ss_pred cccccccccccccCCceeEEEECCCCCEEEEEecceeeee
Confidence 00011223567999999999998876543333
No 192
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.62 E-value=3.3e-07 Score=85.42 Aligned_cols=201 Identities=11% Similarity=0.070 Sum_probs=128.1
Q ss_pred eeEEEecCCE-EEEEcCC--------CCCCeEEEEECCCCc---EEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEE
Q 019103 108 QGLLYAENDT-LFESTGL--------YGRSSVRRVALETGK---VEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIY 175 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGl--------yg~s~V~~iDl~Tgk---v~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~ 175 (346)
..++|+|++. ++.+... ..+..|++||+.+++ .+.............+..+++.| ++...++.+.++
T Consensus 16 ~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~vw 94 (416)
T 2pm9_A 16 ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKII-AGALDNGSLELY 94 (416)
T ss_dssp CBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCE-EEEESSSCEEEE
T ss_pred ceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeE-EEEccCCeEEEe
Confidence 4678889885 6666511 145689999999986 33333334444443333344544 444567899999
Q ss_pred ECCC----CcEEEEEecC--CCceeEEeeC-CCEEEEECCCCeEEEEeCCCCc------EEEEEEe-ccCCeeeeeceee
Q 019103 176 DQNN----LNKLEEFTHQ--MKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLK------VIRKDIV-RYKGREVRNLNEL 241 (346)
Q Consensus 176 D~~t----l~~i~ti~~~--~peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~k------vi~~I~V-~~~G~pv~~lNEL 241 (346)
|..+ .+.+.++... .-....+++| ++.|+.+..++.|.++|..+.+ ....+.. ..+..+ ++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~ 171 (416)
T 2pm9_A 95 STNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE---VISL 171 (416)
T ss_dssp CCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC---CCEE
T ss_pred ecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC---eeEE
Confidence 9988 4566666532 2245567788 7777777778899999998876 3222211 111122 3345
Q ss_pred Eee-C-CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC---cEEE
Q 019103 242 EFI-K-GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP---KLYE 316 (346)
Q Consensus 242 E~~-~-G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp---~l~e 316 (346)
.+. + +.+++....+..|.+.|.++++.+..+....-.. ......+.++|+|++..++++|.... .|+.
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS-------GIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS-------CCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc-------ccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 555 3 5677777778899999999999998885521000 00235789999999876666666555 6555
Q ss_pred EEE
Q 019103 317 INL 319 (346)
Q Consensus 317 v~l 319 (346)
.++
T Consensus 245 ~d~ 247 (416)
T 2pm9_A 245 WDL 247 (416)
T ss_dssp EET
T ss_pred EeC
Confidence 554
No 193
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.62 E-value=3e-06 Score=91.51 Aligned_cols=201 Identities=10% Similarity=0.070 Sum_probs=135.7
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEE 185 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~t 185 (346)
..++.|++|++++.+.+ .+..|.+||..+++.+..+.-. .......+..+++.|.. .-.++.+.++|..+++.+.+
T Consensus 618 v~~~~~s~~~~~l~s~~--~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCG--ADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIAT-CSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp EEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEEEe--CCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEE-EeCCCeEEEEECCCCceEEE
Confidence 46899999998887777 5569999999999988887633 33334333334554444 44679999999999999999
Q ss_pred EecCCC--ceeEEeeCCC--EEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEE
Q 019103 186 FTHQMK--DGWGLATDGK--VLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIAR 260 (346)
Q Consensus 186 i~~~~p--eGwGLt~Dg~--~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~v 260 (346)
+..... ....++++++ .++....++.|.++|..+.+.+.++.-.. .+ ++.+.+. +|...+..-.++.|.+
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~--~~---v~~~~~sp~~~~l~s~s~dg~v~v 769 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT--NS---VNHCRFSPDDELLASCSADGTLRL 769 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS--SC---EEEEEECSSTTEEEEEESSSEEEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC--CC---EEEEEEecCCCEEEEEECCCeEEE
Confidence 975312 2333566544 44444557899999999999877665322 22 2345554 5666666667889999
Q ss_pred EeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 261 ISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 261 ID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
.|..+++....+......................++|+|+++.+++++. +.++..
T Consensus 770 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~--~~v~~~ 824 (1249)
T 3sfz_A 770 WDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK--NKVLLF 824 (1249)
T ss_dssp EEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET--TEEEEE
T ss_pred EeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC--CcEEEE
Confidence 9999999999987644321100000012335678999999999999874 444433
No 194
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.62 E-value=1.1e-05 Score=77.09 Aligned_cols=178 Identities=8% Similarity=-0.034 Sum_probs=119.0
Q ss_pred EecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecCC
Q 019103 112 YAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM 190 (346)
Q Consensus 112 ~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~ 190 (346)
+++++.++.+++ .+..|++||+.+++.+....-. .......+..+++.++ +.-.++.+.++|..+++.+.++....
T Consensus 276 ~~~~~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~h~ 352 (464)
T 3v7d_B 276 VSGHGNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI-SASMDTTIRIWDLENGELMYTLQGHT 352 (464)
T ss_dssp EEEETTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EcCCCCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCcEEEEEeCCC
Confidence 345565555655 4569999999999988877533 3333333333445555 44567899999999999999997532
Q ss_pred CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEE
Q 019103 191 KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLG 270 (346)
Q Consensus 191 peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~ 270 (346)
..-..+..+++.|+.+..++.|.++|..+.+......-.. ++. ...+.. +|.+.+... ++.|.+-|.++|+.+.
T Consensus 353 ~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---~~~-~~~~~~-~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 353 ALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTN---LSA-ITTFYV-SDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTT---CCC-EEEEEE-CSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCC---Ccc-EEEEEe-CCCEEEEec-CCeEEEEECCCCcEEe
Confidence 3344577888888888788899999999988665544321 111 111222 444444333 7899999999999887
Q ss_pred EEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 271 WVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 271 ~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
.+... .......++|+ ++.+++++....
T Consensus 427 ~~~~~------------~~~~v~~v~~~--~~~l~~~~~~~g 454 (464)
T 3v7d_B 427 ANILK------------DADQIWSVNFK--GKTLVAAVEKDG 454 (464)
T ss_dssp SCTTT------------TCSEEEEEEEE--TTEEEEEEEETT
T ss_pred hhhcc------------CCCcEEEEEec--CCEEEEEEEeCC
Confidence 65221 12356789997 678888876544
No 195
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.62 E-value=2e-05 Score=75.38 Aligned_cols=197 Identities=14% Similarity=0.058 Sum_probs=133.4
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~ 173 (346)
+.+.+++. .......+.++ +.++.+++ .+..|++||+.+++.+..+.-.... -..+...++.++.. -.++.+.
T Consensus 150 ~~~~~~~~-h~~~v~~~~~~--~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~l~s~-s~dg~i~ 222 (445)
T 2ovr_B 150 KCLRTLVG-HTGGVWSSQMR--DNIIISGS--TDRTLKVWNAETGECIHTLYGHTST-VRCMHLHEKRVVSG-SRDATLR 222 (445)
T ss_dssp CEEEECCC-CSSCEEEEEEE--TTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETTEEEEE-ETTSEEE
T ss_pred cEEEEEcC-CCCCEEEEEec--CCEEEEEe--CCCeEEEEECCcCcEEEEECCCCCc-EEEEEecCCEEEEE-eCCCEEE
Confidence 44555542 12233678886 33455555 4569999999999988877643332 34567777765554 4679999
Q ss_pred EEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEec
Q 019103 174 IYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW 253 (346)
Q Consensus 174 V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~ 253 (346)
++|..+.+.+.++......-..++.|++.++++..++.|.++|.++.+.+.++.... .+ +..+.+.+.++++. -
T Consensus 223 ~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~---v~~~~~~~~~l~~~-~ 296 (445)
T 2ovr_B 223 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT--NR---VYSLQFDGIHVVSG-S 296 (445)
T ss_dssp EEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS--SC---EEEEEECSSEEEEE-E
T ss_pred EEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCC--Cc---eEEEEECCCEEEEE-e
Confidence 999999999999875433455678899999998888999999999999887775422 22 23466634455544 4
Q ss_pred CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 254 QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
.++.|.+.|..+++.+..+.-. .....+++++ ++ ++++|-..+.|.-.++
T Consensus 297 ~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~--~~-~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 297 LDTSIRVWDVETGNCIHTLTGH-------------QSLTSGMELK--DN-ILVSGNADSTVKIWDI 346 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECCC-------------CSCEEEEEEE--TT-EEEEEETTSCEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEcCC-------------cccEEEEEEe--CC-EEEEEeCCCeEEEEEC
Confidence 5889999999999998887431 1234567775 34 4455555566555544
No 196
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.62 E-value=1.6e-05 Score=77.84 Aligned_cols=179 Identities=12% Similarity=0.175 Sum_probs=119.3
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
..++.++||+..+.+++ .+..|++||..+.++...........+..+.++++.| +....++.+.++|. +.+.+.++
T Consensus 306 v~~~~~~~~~~~l~t~~--~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~v~~~~~-~~~~~~~~ 381 (577)
T 2ymu_A 306 VWGVAFSPDGQTIASAS--DDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTI-ASASDDKTVKLWNR-NGQLLQTL 381 (577)
T ss_dssp EEEEEECTTSSEEEEEE--TTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEET-TCCEEEEE
T ss_pred eEEEEECCCCCEEEEEe--CCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEE-EEEeCCCEEEEEcC-CCCEEEEe
Confidence 47899999998777777 5569999998877654433333444343333344444 44567889999995 56777777
Q ss_pred ecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeC
Q 019103 187 THQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISH 263 (346)
Q Consensus 187 ~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~ 263 (346)
... ...+..+++||++|.+...+..|.++|. +.+.+.++.-.. .++ ..+.+. |++..|..-.+..|.+-|.
T Consensus 382 ~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~--~~v---~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 382 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SSV---WGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS--SCE---EEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC--CCe---EEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 642 2245678899999988777889999995 566666654322 232 235554 5655665556778888885
Q ss_pred CCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 264 EDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 264 ~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+++.+..+.-. ....+.+||+|+++.|..++.
T Consensus 456 -~~~~~~~~~~~-------------~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 456 -NGQLLQTLTGH-------------SSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp -TSCEEEEEECC-------------SSCEEEEEECTTSCEEEEEET
T ss_pred -CCCEEEEEcCC-------------CCCEEEEEEcCCCCEEEEEeC
Confidence 66776666321 124578999999987766543
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.60 E-value=1.3e-05 Score=82.53 Aligned_cols=196 Identities=12% Similarity=0.065 Sum_probs=125.9
Q ss_pred eeEEEecCC-EEEEEcCCCC-------------CCeEEEEECCCCcEEEEe--cc---CCCeeEEEEEEeCCEEEEEEee
Q 019103 108 QGLLYAEND-TLFESTGLYG-------------RSSVRRVALETGKVEAIN--QM---EGSYFGEGLTLLGEKLFQVTWL 168 (346)
Q Consensus 108 qGL~~~~d~-~LyeStGlyg-------------~s~V~~iDl~Tgkv~~~~--~l---~~~~FgeGit~~g~~LY~ltw~ 168 (346)
.++.++||| .||.++...+ ...|.++|+.+++..... .. +...++..++.+|+.|+...+.
T Consensus 174 ~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 174 SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 579999998 5666654322 346999999998732111 22 1223455566678888877663
Q ss_pred ----CCEEEEEECCC------Cc-EEEEEecC-CCceeEEeeCCCEEEE-ECC---CCeEEEEeCCCCcE--EEEEEecc
Q 019103 169 ----QKTGFIYDQNN------LN-KLEEFTHQ-MKDGWGLATDGKVLFG-SDG---SSMLYQIDPQTLKV--IRKDIVRY 230 (346)
Q Consensus 169 ----~~~v~V~D~~t------l~-~i~ti~~~-~peGwGLt~Dg~~Lyv-SdG---s~~l~vIDp~T~kv--i~~I~V~~ 230 (346)
.+.++++|.++ .+ ....+... ......+++||++||+ +|. ...|+++|.++.+. ...+.-..
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred cCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 57899999876 43 34555432 2233458899998877 553 34899999988642 22332221
Q ss_pred CCeeeeeceeeEee-CCEEEEEecCC--CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 231 KGREVRNLNELEFI-KGEVWANVWQT--DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 231 ~G~pv~~lNELE~~-~G~LyaNv~~s--n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
.. ..+..+.+. +++++++.-.. ..|.++|+++|+.+..+.++ .....+++++|++++++++
T Consensus 334 ~~---~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-------------~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 334 EK---DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-------------VGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp SS---CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-------------SSEEEEEECCTTCSEEEEE
T ss_pred CC---CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-------------CceEEEEecCCCCCEEEEE
Confidence 11 123446666 67877655433 36899999999988888552 1245789999999988877
Q ss_pred cCCC---CcEEEEEE
Q 019103 308 GKLW---PKLYEINL 319 (346)
Q Consensus 308 GK~W---p~l~ev~l 319 (346)
.... +.+|...+
T Consensus 398 ~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDL 412 (710)
T ss_dssp EECSSCCCEEEEEET
T ss_pred EeCCCCCCEEEEEEC
Confidence 4443 56777765
No 198
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.60 E-value=1.3e-05 Score=76.75 Aligned_cols=197 Identities=14% Similarity=0.096 Sum_probs=131.5
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~ 173 (346)
+.+.+++. .......+.+ ++.++.+.+ .+..|++||+.+++.+....-.... -..++..++.++. .-.++.+.
T Consensus 164 ~~~~~~~~-h~~~v~~l~~--~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~l~s-~s~dg~i~ 236 (435)
T 1p22_A 164 ECKRILTG-HTGSVLCLQY--DERVIITGS--SDSTVRVWDVNTGEMLNTLIHHCEA-VLHLRFNNGMMVT-CSKDRSIA 236 (435)
T ss_dssp CEEEEECC-CSSCEEEEEC--CSSEEEEEE--TTSCEEEEESSSCCEEEEECCCCSC-EEEEECCTTEEEE-EETTSCEE
T ss_pred eEEEEEcC-CCCcEEEEEE--CCCEEEEEc--CCCeEEEEECCCCcEEEEEcCCCCc-EEEEEEcCCEEEE-eeCCCcEE
Confidence 34555652 1223356666 566666656 4569999999999988887644332 3446666665444 45679999
Q ss_pred EEECCCCcEEE---EEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEE
Q 019103 174 IYDQNNLNKLE---EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWA 250 (346)
Q Consensus 174 V~D~~tl~~i~---ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~Lya 250 (346)
++|..+.+.+. .+......-..++.|++.++++..++.|.++|.++++.+.++.-.. .++ ..+.+.+..+++
T Consensus 237 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~v---~~~~~~~~~l~~ 311 (435)
T 1p22_A 237 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK--RGI---ACLQYRDRLVVS 311 (435)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCE---EEEEEETTEEEE
T ss_pred EEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC--CcE---EEEEeCCCEEEE
Confidence 99998887663 2222123445678899999998889999999999999988877533 222 345564445544
Q ss_pred EecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 251 NVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 251 Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
...++.|.+.|..+|+.+.++... ......++++ ++. +++|-..+.|.--++
T Consensus 312 -g~~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~~~~~--~~~-l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 312 -GSSDNTIRLWDIECGACLRVLEGH-------------EELVRCIRFD--NKR-IVSGAYDGKIKVWDL 363 (435)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCC-------------SSCEEEEECC--SSE-EEEEETTSCEEEEEH
T ss_pred -EeCCCeEEEEECCCCCEEEEEeCC-------------cCcEEEEEec--CCE-EEEEeCCCcEEEEEC
Confidence 446889999999999998888431 1245778884 444 555556666665554
No 199
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.59 E-value=4.1e-06 Score=86.16 Aligned_cols=162 Identities=16% Similarity=0.111 Sum_probs=109.0
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe----eEEEEEEeCC------EEEEEEe-----eCCEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY----FGEGLTLLGE------KLFQVTW-----LQKTG 172 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~----FgeGit~~g~------~LY~ltw-----~~~~v 172 (346)
.|+++. ++++|+++. +..|..+|++||+++=+..++... +...-.+.++ .+|+.+. .++.+
T Consensus 111 ~g~a~~-~~~v~~~t~---dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v 186 (582)
T 1flg_A 111 RGAAIY-GDKVFFGTL---DASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRL 186 (582)
T ss_dssp CCCEEE-TTEEEEEET---TTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEE
T ss_pred CccEEE-CCEEEEEeC---CCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEE
Confidence 577876 689999874 359999999999998887665411 1111223445 7888653 36899
Q ss_pred EEEECCCCcEEEEEecCC----C-------------------c--------------------eeEEeeCCCEEEEECC-
Q 019103 173 FIYDQNNLNKLEEFTHQM----K-------------------D--------------------GWGLATDGKVLFGSDG- 208 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~~----p-------------------e--------------------GwGLt~Dg~~LyvSdG- 208 (346)
+.+|++|++++-+.+... | + ...++++.+.+|+..+
T Consensus 187 ~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn 266 (582)
T 1flg_A 187 FARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGN 266 (582)
T ss_dssp EEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECC
T ss_pred EEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCC
Confidence 999999999998876420 0 0 1235567789998442
Q ss_pred -----------------------CCeEEEEeCCCCcEEEEEEeccC------C--eeeeeceeeEeeCC---EEEEEecC
Q 019103 209 -----------------------SSMLYQIDPQTLKVIRKDIVRYK------G--REVRNLNELEFIKG---EVWANVWQ 254 (346)
Q Consensus 209 -----------------------s~~l~vIDp~T~kvi~~I~V~~~------G--~pv~~lNELE~~~G---~LyaNv~~ 254 (346)
++.|+-+|++|++++=+.+...+ + .|+ +-..+..+| .+++..-.
T Consensus 267 ~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~--l~~~~~~~G~~~~~v~~~~~ 344 (582)
T 1flg_A 267 PGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV--LFDYKAKDGKIVKATAHADR 344 (582)
T ss_dssp BSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE--EEEEECSSSCEEEEEEEECT
T ss_pred CCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE--EEeeecCCCCEEEEEEEECC
Confidence 15899999999999877766321 1 121 111111356 23333334
Q ss_pred CCeEEEEeCCCCeEEEEEECC
Q 019103 255 TDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 255 sn~I~vID~~TG~Vv~~I~l~ 275 (346)
...+.++|.+||+++-.+++.
T Consensus 345 ~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 345 NGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp TSEEEEEETTTCCEEEEEESS
T ss_pred CceEEEEECCCCCEecccccc
Confidence 778999999999999888774
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.59 E-value=2.2e-05 Score=76.71 Aligned_cols=208 Identities=10% Similarity=-0.030 Sum_probs=134.8
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCC--CeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCC
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR--SSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~--s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~ 170 (346)
+.+.++.....+ ...+.|+++++.+.+.+...+ ..|..|| +++.+....-. .......+..+++.++++.-.++
T Consensus 107 ~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 183 (615)
T 1pgu_A 107 NVKSEFQVLAGP-ISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 183 (615)
T ss_dssp EEEEEEECCSSC-EEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTT
T ss_pred cccchhhccccc-EEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCC
Confidence 455566532333 489999999976655552221 4666666 77776666433 23333333334444666667789
Q ss_pred EEEEEECCCCcEEEEEecCCC-----ceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEec--cCCeeeeeceeeE
Q 019103 171 TGFIYDQNNLNKLEEFTHQMK-----DGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVR--YKGREVRNLNELE 242 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~~p-----eGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~--~~G~pv~~lNELE 242 (346)
.+.++|..+.+.+.++..... ....+++| ++.|++...++.|.++|..+.+.+.++.-. .+..++ +.+.
T Consensus 184 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v---~~~~ 260 (615)
T 1pgu_A 184 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI---FALS 260 (615)
T ss_dssp EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCE---EEEE
T ss_pred cEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCce---EEEE
Confidence 999999999999999874311 23457788 899988877889999999999988777320 111232 3455
Q ss_pred eeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 243 FIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 243 ~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
+.++..++..-.++.|.+.|..+++.+..+....- +.......+++. +++.+++. -..+.++-.+
T Consensus 261 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~l~~~-~~~g~i~~~d 325 (615)
T 1pgu_A 261 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ---------QLGNQQVGVVAT-GNGRIISL-SLDGTLNFYE 325 (615)
T ss_dssp ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT---------CGGGCEEEEEEE-ETTEEEEE-ETTSCEEEEE
T ss_pred EcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC---------cccCceeEEEeC-CCCeEEEE-ECCCCEEEEE
Confidence 55666666555688999999999999999976321 112345677885 55655544 4455655444
No 201
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.58 E-value=1.9e-05 Score=70.07 Aligned_cols=203 Identities=13% Similarity=0.131 Sum_probs=125.9
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc----EEEEecc-CCCeeEEEEEEeC---CEEEEEEeeCCEEEEE
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQM-EGSYFGEGLTLLG---EKLFQVTWLQKTGFIY 175 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk----v~~~~~l-~~~~FgeGit~~g---~~LY~ltw~~~~v~V~ 175 (346)
......+.|++++.++.+.+ .+..|++||+.+++ ....+.- .... ..++... +.++++.-.++.+.++
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCS--SDQHIKVFKLDKDTSNWELSDSWRAHDSSI--VAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEE--TTSEEEEEEECSSSCCEEEEEEEECCSSCE--EEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred ccceeEEEEcCCCCEEEEee--CCCeEEEEECCCCCCcceecceeccCCCcE--EEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 33457899999998777766 45699999999873 4443332 2333 3344432 4444555568999999
Q ss_pred ECCCC---------cEEEEEecC--CCceeEEeeC--CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCC--------ee
Q 019103 176 DQNNL---------NKLEEFTHQ--MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKG--------RE 234 (346)
Q Consensus 176 D~~tl---------~~i~ti~~~--~peGwGLt~D--g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G--------~p 234 (346)
|.++. +.+.++... .-....++++ ++.|+++..++.|.++|..+.+.+..+...... ..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 99887 445666432 1234456777 888888878899999999888765544432100 00
Q ss_pred eeeceeeEee----CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC---EEEEe
Q 019103 235 VRNLNELEFI----KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN---RIFVT 307 (346)
Q Consensus 235 v~~lNELE~~----~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~---~LfVT 307 (346)
....+.+.+. ++..++..-..+.+...+..+++......+.. .....++++|+|++. .+++|
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------h~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPG-----------HKSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCC-----------CCSCEEEEEECCCSSCSSEEEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCC-----------CCcceeEEEECCCCCCcceEEEE
Confidence 1112233333 24455544456677777777777633332211 123568899999984 67778
Q ss_pred cCCCCcEEEEEEee
Q 019103 308 GKLWPKLYEINLRE 321 (346)
Q Consensus 308 GK~Wp~l~ev~l~~ 321 (346)
|-..+.|.--++..
T Consensus 236 ~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 236 GCKDGRIRIFKITE 249 (351)
T ss_dssp EETTSCEEEEEEEE
T ss_pred EcCCCeEEEEeCCC
Confidence 77777777666654
No 202
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.57 E-value=1.5e-05 Score=75.54 Aligned_cols=214 Identities=10% Similarity=0.086 Sum_probs=139.2
Q ss_pred EEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECC---CCcEEEEec--------cC---CCeeEEEEEEe---
Q 019103 96 VNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALE---TGKVEAINQ--------ME---GSYFGEGLTLL--- 158 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~---Tgkv~~~~~--------l~---~~~FgeGit~~--- 158 (346)
..++.|... ...+.+++++.++.+++ .+..|++||+. +|+...... +. .......+...
T Consensus 105 ~~~~~h~~~--v~~~~~~~~~~~l~s~s--~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 105 SLTYDCSST--VTQITMIPNFDAFAVSS--KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp SEEEECSSC--EEEEEECTTSSEEEEEE--TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred eeeccCCCC--EEEEEEeCCCCEEEEEe--CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 344556433 37999999888777777 45699999995 666544332 11 12222223321
Q ss_pred CCEEEEEEeeCCEEEEEECCCCcEEEEEec---C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCee
Q 019103 159 GEKLFQVTWLQKTGFIYDQNNLNKLEEFTH---Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGRE 234 (346)
Q Consensus 159 g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~---~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~p 234 (346)
++.++++.-.++.+.++|..+.+.+.++.. . .-....+++|++.|++...++.|.++|.++.+.+.++..... .+
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~ 259 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH-AP 259 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC-EE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC-Cc
Confidence 245555556689999999999999999974 1 224445678999999988889999999999998888876432 23
Q ss_pred eeeceeeEee-----CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhh---h-hh---------ccCCCCceeeEEE
Q 019103 235 VRNLNELEFI-----KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRER---L-VA---------AGYNGIDVLNGIA 296 (346)
Q Consensus 235 v~~lNELE~~-----~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~---~-~~---------~~~~~~~vlNGIA 296 (346)
+. .+.+. +|.+.+..-.++.|.+.|..+++.+..+.-..-... . +. .+.........++
T Consensus 260 v~---~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 260 IT---HVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp EE---EEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred eE---EEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 33 34222 466677776678899999999999998864210000 0 00 0000123456799
Q ss_pred EeCCCCEEEEecCCCCcEEEEEE
Q 019103 297 WDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 297 ~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
++ ++ .+++||-....|+--++
T Consensus 337 ~~-~~-~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 337 VS-ND-KILLTDEATSSIVMFSL 357 (437)
T ss_dssp EE-TT-EEEEEEGGGTEEEEEET
T ss_pred EC-Cc-eEEEecCCCCeEEEEEC
Confidence 99 44 67777777777666654
No 203
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.57 E-value=5e-05 Score=72.49 Aligned_cols=201 Identities=9% Similarity=0.029 Sum_probs=131.5
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEe-CCEEEEEEeeCCE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLL-GEKLFQVTWLQKT 171 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~-g~~LY~ltw~~~~ 171 (346)
+.+.++.. .......+.+++++ ++++.+ .+..|++||+.+++.+....- ........+... ++...++.-.++.
T Consensus 153 ~~~~~~~~-h~~~V~~l~~~~~~-~l~s~s--~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 153 KFLLQLSG-HDGGVWALKYAHGG-ILVSGS--TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp EEEEEECC-CSSCEEEEEECSTT-EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred cEEEEEeC-CCcCEEEEEEcCCC-EEEEEe--CCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 45666652 23334789998877 555555 456999999999998877753 333333333332 3466666677899
Q ss_pred EEEEECCCCcEEE-----------------------EEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEe
Q 019103 172 GFIYDQNNLNKLE-----------------------EFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (346)
Q Consensus 172 v~V~D~~tl~~i~-----------------------ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V 228 (346)
+.++|..+.+... .+......-..++++++.+++...++.|.++|..+++.+.++.-
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 9999998876443 22211223345788999999988888999999999998877654
Q ss_pred ccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 229 RYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
.. .+ +..+.+. +|...+..-.++.|.+.|.++|+.+.++.-. ......+++++ + .+++
T Consensus 309 ~~--~~---v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------------~~~v~~~~~~~--~-~l~s 367 (464)
T 3v7d_B 309 HT--DR---IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH-------------TALVGLLRLSD--K-FLVS 367 (464)
T ss_dssp CS--SC---EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECS--S-EEEE
T ss_pred CC--CC---EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC-------------CCcEEEEEEcC--C-EEEE
Confidence 22 22 2345555 4544555556889999999999998887431 12457788873 3 4555
Q ss_pred cCCCCcEEEEEE
Q 019103 308 GKLWPKLYEINL 319 (346)
Q Consensus 308 GK~Wp~l~ev~l 319 (346)
|-..+.|.--++
T Consensus 368 ~s~dg~v~vwd~ 379 (464)
T 3v7d_B 368 AAADGSIRGWDA 379 (464)
T ss_dssp EETTSEEEEEET
T ss_pred EeCCCcEEEEEC
Confidence 555565554433
No 204
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.57 E-value=5.5e-06 Score=81.04 Aligned_cols=163 Identities=10% Similarity=-0.067 Sum_probs=112.7
Q ss_pred cceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCC----eeEEEEEEe-CCEEEEEEeeCCEEEEEECCC
Q 019103 106 FTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLL-GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 106 FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~----~FgeGit~~-g~~LY~ltw~~~~v~V~D~~t 179 (346)
....+.|++++. ++.+.+ .+..|++||..+++.+..+.-... .....+.++ ++.|+ +.-.++.+.++|..+
T Consensus 162 ~v~~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI-TVGSDRKISCFDGKS 238 (615)
T ss_dssp CEEEEEECSSSSCEEEEEE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEE-EEETTCCEEEEETTT
T ss_pred cEEEEEECCCCCcEEEEEe--CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEE-EEeCCCeEEEEECCC
Confidence 347899999885 666666 456999999999998888764332 323333334 34444 444579999999999
Q ss_pred CcEEEEE-----ecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEec
Q 019103 180 LNKLEEF-----THQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW 253 (346)
Q Consensus 180 l~~i~ti-----~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~ 253 (346)
.+.+.++ .+. .-....++ |++.|+++..++.|.++|..+.+.+.++......... ....+.+.++...+...
T Consensus 239 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 239 GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN-QQVGVVATGNGRIISLS 316 (615)
T ss_dssp CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG-CEEEEEEEETTEEEEEE
T ss_pred CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC-ceeEEEeCCCCeEEEEE
Confidence 9999999 332 11333455 8889988877889999999999999888875321111 11123343554444444
Q ss_pred CCCeEEEEeCCCCeEEEEEE
Q 019103 254 QTDCIARISHEDGVVLGWVL 273 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~ 273 (346)
..+.|.+.|..+++.+..+.
T Consensus 317 ~~g~i~~~d~~~~~~~~~~~ 336 (615)
T 1pgu_A 317 LDGTLNFYELGHDEVLKTIS 336 (615)
T ss_dssp TTSCEEEEETTEEEEEEEEC
T ss_pred CCCCEEEEECCCCcEEEEEe
Confidence 58899999999998887773
No 205
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.56 E-value=1e-05 Score=76.59 Aligned_cols=197 Identities=12% Similarity=0.058 Sum_probs=129.1
Q ss_pred ceeEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEecc--C--CCeeEEEEEE--eCCEEEEEEeeCCEEEEEECC-
Q 019103 107 TQGLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQM--E--GSYFGEGLTL--LGEKLFQVTWLQKTGFIYDQN- 178 (346)
Q Consensus 107 TqGL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l--~--~~~FgeGit~--~g~~LY~ltw~~~~v~V~D~~- 178 (346)
...+.+.+++ ..+.+++ ++..|++||+.+|+.+..... + .......++. .++.++++.-.++.+.++|..
T Consensus 160 v~~~~~~~~~~~~l~s~s--~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGS--GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp CCCCBCCSSSSSCEEEEC--TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred eEEEEEecCCCCEEEEEC--CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence 3466677654 4455656 567999999999998776632 1 1111233443 245677777788999999987
Q ss_pred CCcEEEEEec-C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC--CeeeeeceeeEee-CCEEEEEec
Q 019103 179 NLNKLEEFTH-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELEFI-KGEVWANVW 253 (346)
Q Consensus 179 tl~~i~ti~~-~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~--G~pv~~lNELE~~-~G~LyaNv~ 253 (346)
+.+.+.++.- . .-....++|||+.|+.+..+.+|.++|..+.+.+..+..... ......+..+.+. +|++.+.-.
T Consensus 238 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 238 TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 4566666652 2 235567889999988877788999999999988766544221 1111123345554 566666666
Q ss_pred CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 254 QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
.++.|.+-|..+++.+..+.. +.. .-....+.++|+|+++.| +||-...+|.
T Consensus 318 ~dg~i~vwd~~~~~~~~~~~~--~~~-------~h~~~v~~l~~s~dg~~l-~sgs~D~~i~ 369 (380)
T 3iz6_a 318 SNGDCYVWDTLLAEMVLNLGT--LQN-------SHEGRISCLGLSSDGSAL-CTGSWDKNLK 369 (380)
T ss_dssp TTSCEEEEETTTCCEEEEECC--SCS-------SCCCCCCEEEECSSSSEE-EEECTTSCEE
T ss_pred CCCCEEEEECCCCceEEEEec--ccC-------CCCCceEEEEECCCCCEE-EEeeCCCCEE
Confidence 788999999999998877632 110 012346789999998865 4555555543
No 206
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.55 E-value=2.7e-05 Score=69.11 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=122.3
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEE 185 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~t 185 (346)
...+.++ +.++.+++ .+..|.+|| +++........ .......+...++..+++.-.++.+.++| ..+.+.+
T Consensus 107 i~~~~~~--~~~l~~~~--~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~ 178 (313)
T 3odt_A 107 VCSLSFQ--DGVVISGS--WDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKT 178 (313)
T ss_dssp EEEEEEE--TTEEEEEE--TTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEE
T ss_pred EEEEEec--CCEEEEEe--CCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEE
Confidence 3677774 33444545 456999999 66666666543 33333333332333444555678999999 4556666
Q ss_pred Eec--C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEE
Q 019103 186 FTH--Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARI 261 (346)
Q Consensus 186 i~~--~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vI 261 (346)
+.. . ......++++++ +++...++.|.++|..+.+.+.++.... .+ ++.+.+. +|+++ ..-.++.|.+.
T Consensus 179 ~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~---i~~~~~~~~~~l~-~~~~dg~v~iw 251 (313)
T 3odt_A 179 FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHE--SF---VYCIKLLPNGDIV-SCGEDRTVRIW 251 (313)
T ss_dssp ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCS--SC---EEEEEECTTSCEE-EEETTSEEEEE
T ss_pred EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCC--ce---EEEEEEecCCCEE-EEecCCEEEEE
Confidence 653 1 224445678888 6666678899999999999988876533 22 3346665 56544 44468899999
Q ss_pred eCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 262 SHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 262 D~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
|.++++.+..+.... .....++|+|+++ ++++-..+.|+--++.
T Consensus 252 d~~~~~~~~~~~~~~-------------~~i~~~~~~~~~~--~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 252 SKENGSLKQVITLPA-------------ISIWSVDCMSNGD--IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CTTTCCEEEEEECSS-------------SCEEEEEECTTSC--EEEEETTSCEEEEESC
T ss_pred ECCCCceeEEEeccC-------------ceEEEEEEccCCC--EEEEeCCCcEEEEeCC
Confidence 999999998885521 2467899999998 4556667777766654
No 207
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.54 E-value=1.9e-05 Score=74.24 Aligned_cols=183 Identities=12% Similarity=0.024 Sum_probs=121.8
Q ss_pred eEEEecCC-EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCC-cEEEEE
Q 019103 109 GLLYAEND-TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL-NKLEEF 186 (346)
Q Consensus 109 GL~~~~d~-~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl-~~i~ti 186 (346)
-+.+.+++ .+..+++ ++..|++||..+|+.+..+..+... ..+...++.++++. ++.+.++|..+. +.+.++
T Consensus 63 ~~~~~~~~~~~~~~~~--~d~~v~iWd~~~~~~~~~~~~~~~v--~~v~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 63 KVRMLHRTNYVAFVTG--VKEVVHIWDDVKKQDVSRIKVDAPV--KDLFLSREFIVVSY--GDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp EEEECTTSSEEEEECS--STTEEEEEETTTTEEEEEEECSSCE--EEEEECSSEEEEEE--TTEEEEEESSTTCCBSSCC
T ss_pred EEEEcCCCCEEEEEEC--CccEEEEEECCCCcEEEEEECCCce--EEEEEcCCEEEEEE--cCEEEEEECCCCceeeEEe
Confidence 45555555 4545555 4569999999999999988876654 45677778777764 789999999988 777777
Q ss_pred ecCCCce-eEEeeCCCEEEEE--CCCCeEEEEeCCCCcE----------------EEEEEeccCCeeeeeceeeEee-CC
Q 019103 187 THQMKDG-WGLATDGKVLFGS--DGSSMLYQIDPQTLKV----------------IRKDIVRYKGREVRNLNELEFI-KG 246 (346)
Q Consensus 187 ~~~~peG-wGLt~Dg~~LyvS--dGs~~l~vIDp~T~kv----------------i~~I~V~~~G~pv~~lNELE~~-~G 246 (346)
.. +.| ..+++ +.+.++ ..++.|.++|..+.+. +..+. .+..++ +.+.+. +|
T Consensus 137 ~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~--~h~~~v---~~~~~s~~g 207 (355)
T 3vu4_A 137 IR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK--AHTNPI---KMVRLNRKS 207 (355)
T ss_dssp EE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC--CCSSCE---EEEEECTTS
T ss_pred cc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE--ccCCce---EEEEECCCC
Confidence 65 233 23555 555554 3477999999988651 12221 222232 345554 67
Q ss_pred EEEEEecCCCe-EEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 247 EVWANVWQTDC-IARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 247 ~LyaNv~~sn~-I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
.+.|+.-.+.+ |.+-|..+|+.+.++.... .....+.+||+|+++.|..++. ..++.--+
T Consensus 208 ~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~-----------h~~~v~~~~~s~~~~~l~s~s~-d~~v~iw~ 268 (355)
T 3vu4_A 208 DMVATCSQDGTIIRVFKTEDGVLVREFRRGL-----------DRADVVDMKWSTDGSKLAVVSD-KWTLHVFE 268 (355)
T ss_dssp SEEEEEETTCSEEEEEETTTCCEEEEEECTT-----------CCSCEEEEEECTTSCEEEEEET-TCEEEEEE
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEEcCC-----------CCCcEEEEEECCCCCEEEEEEC-CCEEEEEE
Confidence 77777767887 9999999999998885210 0124688999999887766654 34444333
No 208
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.54 E-value=1.8e-05 Score=72.76 Aligned_cols=115 Identities=9% Similarity=-0.001 Sum_probs=84.6
Q ss_pred CcceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC--CEEEEEEeeCCEEEEEECCCCc
Q 019103 105 AFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG--EKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 105 ~FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g--~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
.-...+.+++ ++.++.+++ .+..|++||+.+++.......+.......+...+ +.++++...++.+.++|..+.+
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSS--FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CcEEEEEEccCCCcEEEEEe--CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 3347899998 556777766 4569999999999999888877665554444432 3366666778999999999999
Q ss_pred EEEEEecC--CCceeEEeeCCCE-EEEECCCCeEEEEeCCCCc
Q 019103 182 KLEEFTHQ--MKDGWGLATDGKV-LFGSDGSSMLYQIDPQTLK 221 (346)
Q Consensus 182 ~i~ti~~~--~peGwGLt~Dg~~-LyvSdGs~~l~vIDp~T~k 221 (346)
.+.++... .-....++++++. ++++..++.|.++|..+.+
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 98888742 1244567888986 5556668899999987755
No 209
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.53 E-value=3e-06 Score=86.39 Aligned_cols=184 Identities=10% Similarity=0.059 Sum_probs=113.3
Q ss_pred eeEEEecCCE-EEEEcCCCC---CCeEEEEECCCCcEEEEeccCCC-------------------------eeEEEEEEe
Q 019103 108 QGLLYAENDT-LFESTGLYG---RSSVRRVALETGKVEAINQMEGS-------------------------YFGEGLTLL 158 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg---~s~V~~iDl~Tgkv~~~~~l~~~-------------------------~FgeGit~~ 158 (346)
..+.++|||+ |+.++...| ...|.+||+++|+.......... .....++++
T Consensus 40 ~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpD 119 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPD 119 (741)
T ss_dssp EEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTT
T ss_pred CCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCC
Confidence 5899999996 443332112 24899999999997766643211 233345567
Q ss_pred CCEEEEEEeeCCEEEEEECCCCc--EEEEEec-C-CCceeEEeeCCCEEEE-ECCCCeEEEEeCCCCcEEEEEEeccCCe
Q 019103 159 GEKLFQVTWLQKTGFIYDQNNLN--KLEEFTH-Q-MKDGWGLATDGKVLFG-SDGSSMLYQIDPQTLKVIRKDIVRYKGR 233 (346)
Q Consensus 159 g~~LY~ltw~~~~v~V~D~~tl~--~i~ti~~-~-~peGwGLt~Dg~~Lyv-SdGs~~l~vIDp~T~kvi~~I~V~~~G~ 233 (346)
|+.|+.+.. +.++++|.++.+ .+.++.. . ......++|||++|+. ++ +.|+++|.++.+.......+. .
T Consensus 120 g~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~~~~~~~--~ 193 (741)
T 2ecf_A 120 AQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQLTADGS--T 193 (741)
T ss_dssp SSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEECCCCCC--S
T ss_pred CCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEEeccCCc--c
Confidence 788877764 999999999872 2333332 1 2345668999997655 54 489999999987653322221 1
Q ss_pred eee-------------eceeeEee-CC-EEEEEecCC--------------------------------CeEEEEeCCC-
Q 019103 234 EVR-------------NLNELEFI-KG-EVWANVWQT--------------------------------DCIARISHED- 265 (346)
Q Consensus 234 pv~-------------~lNELE~~-~G-~LyaNv~~s--------------------------------n~I~vID~~T- 265 (346)
.+. ....+.+. || +|+...... ..|.++|.++
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 110 01234444 45 455443322 1788999999
Q ss_pred CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 266 GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 266 G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+++.. +.... ........++| ||++.|+++..
T Consensus 274 ~~~~~-~~~~~----------~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 274 AQTQW-IDLGK----------EQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp CCCEE-ECCCS----------CSSEEEEEEEE-EETTEEEEEEE
T ss_pred CceEE-ecCCC----------CcceEEEEEEe-CCCCEEEEEEe
Confidence 88643 32210 12346688999 99999997753
No 210
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.53 E-value=7.7e-06 Score=78.03 Aligned_cols=199 Identities=10% Similarity=-0.041 Sum_probs=118.6
Q ss_pred CCcceeEEEec--------CCEEEEEcCCCCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEEEe--CCEEEEEEeeCCEE
Q 019103 104 RAFTQGLLYAE--------NDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLL--GEKLFQVTWLQKTG 172 (346)
Q Consensus 104 ~~FTqGL~~~~--------d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~-~l~~~~FgeGit~~--g~~LY~ltw~~~~v 172 (346)
..+.+.+.|+| |++++.|.| .+.+|++||+.+++..... ...... ..++.. +..+.++.-.++.+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s--~D~tv~~Wd~~~~~~~~~~~~~~~~v--~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVG--DDCTLIIWRLTDEGPILAGYPLSSPG--ISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEE--TTSEEEEEEEETTEEEEEEEECSSCE--EEEEEETTEEEEEEEEETTSEE
T ss_pred CCceEEEEEccccccccCCCCCEEEEEE--CCCeEEEEECCCCceeeeecCCCCCc--EEEEECCCCCceEEecCCCCEE
Confidence 45668999987 789999998 6679999999887654443 444443 345554 34566667788999
Q ss_pred EEEECCCCcEEEEEecC---------------------------CCceeEEe-eCCCEEEEECCCCeEEEEeCCCCcEEE
Q 019103 173 FIYDQNNLNKLEEFTHQ---------------------------MKDGWGLA-TDGKVLFGSDGSSMLYQIDPQTLKVIR 224 (346)
Q Consensus 173 ~V~D~~tl~~i~ti~~~---------------------------~peGwGLt-~Dg~~LyvSdGs~~l~vIDp~T~kvi~ 224 (346)
.++|..+.+...+.... .-....+. +||+.|+....++++.++|..+.+...
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 99999988765544210 00112222 688988887778899999998877665
Q ss_pred EEEeccC----------Ceeee---eceeeEee---CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCC
Q 019103 225 KDIVRYK----------GREVR---NLNELEFI---KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNG 288 (346)
Q Consensus 225 ~I~V~~~----------G~pv~---~lNELE~~---~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~ 288 (346)
.+..... ++... ......+. ++.+.+.--.+..|.+.|..+|+.+....- .
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-------------~ 358 (393)
T 4gq1_A 292 EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-------------L 358 (393)
T ss_dssp ------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-------------C
T ss_pred eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC-------------C
Confidence 5543221 00000 00000111 334445555678899999999987655421 0
Q ss_pred CceeeEEEEeCCCCEEEEecCCCCcEEEEEEee
Q 019103 289 IDVLNGIAWDSNRNRIFVTGKLWPKLYEINLRE 321 (346)
Q Consensus 289 ~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~ 321 (346)
....+.+||+|+|+.|.++. .+.+..|+|..
T Consensus 359 ~~~V~svafspdG~~LA~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 359 GMPIVDFCWHQDGSHLAIAT--EGSVLLTRLMG 389 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEE--SSEEEEEEEGG
T ss_pred CCcEEEEEEcCCCCEEEEEe--CCCeEEEEEeC
Confidence 12457899999999998885 46788888754
No 211
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.52 E-value=1e-05 Score=79.11 Aligned_cols=202 Identities=13% Similarity=0.162 Sum_probs=119.2
Q ss_pred ceeEEEec--CC--EEEEEcCCCCCCeEEEEECC--CCcEEEEeccCCCe--eEEEEEE-eCCEEEEEEe----------
Q 019103 107 TQGLLYAE--ND--TLFESTGLYGRSSVRRVALE--TGKVEAINQMEGSY--FGEGLTL-LGEKLFQVTW---------- 167 (346)
Q Consensus 107 TqGL~~~~--d~--~LyeStGlyg~s~V~~iDl~--Tgkv~~~~~l~~~~--FgeGit~-~g~~LY~ltw---------- 167 (346)
..||.+.. +| +||+.+-..+.++|.+++++ ++.....-.+...+ +.-.+.. ..+.+|+.+.
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 47999865 35 69988765556787776554 44332222333222 2334444 4588999864
Q ss_pred -------eCCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEEC-CCCeEEEEeCC-CCcEEEEEEeccCCeeeeec
Q 019103 168 -------LQKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSD-GSSMLYQIDPQ-TLKVIRKDIVRYKGREVRNL 238 (346)
Q Consensus 168 -------~~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~-T~kvi~~I~V~~~G~pv~~l 238 (346)
..+.++.||+.+.+++.. ....|.|.+++||+++||++| ..++|+.+|.. +.++...-.+...|.|=.
T Consensus 194 ~e~~~~~~~g~vyr~d~~~~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDG-- 270 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDN-- 270 (355)
T ss_dssp HHHHTTCCCEEEEEECTTCCEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEE--
T ss_pred chhhccCCccEEEEEECCeEEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCce--
Confidence 236799999875444321 122579999999999999999 58899999854 344432212222344422
Q ss_pred eeeEee--CCEEEE-EecCCCeEEEEeCC--CCeEEEEEECCchhhhh-hhccC-CCCceeeE--EEEeCCCCEEEEecC
Q 019103 239 NELEFI--KGEVWA-NVWQTDCIARISHE--DGVVLGWVLLPNLRERL-VAAGY-NGIDVLNG--IAWDSNRNRIFVTGK 309 (346)
Q Consensus 239 NELE~~--~G~Lya-Nv~~sn~I~vID~~--TG~Vv~~I~l~~l~~~~-~~~~~-~~~~vlNG--IA~d~~~~~LfVTGK 309 (346)
+..+ +|.||+ +.|....|.++||+ .+..+.+|... +.+.. ...-+ .++.++.| .|. +.+++||+.+=
T Consensus 271 --i~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~-~~~~~~v~~v~~ddG~~l~~~T~a~-~~~g~L~iGsv 346 (355)
T 3sre_A 271 --ISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDI-LSEEPKVTVVYAENGTVLQGSTVAA-VYKGKLLIGTV 346 (355)
T ss_dssp --EEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECT-TSSSCEEEEEEEECSSSCCSEEEEE-EETTEEEEEES
T ss_pred --EEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEcc-CCCCcEEEEEEEcCCCEEEeeEEEE-EECCEEEEEEc
Confidence 5555 489998 45777778888887 47777887641 11100 00000 12333333 222 34578999876
Q ss_pred CCCcEE
Q 019103 310 LWPKLY 315 (346)
Q Consensus 310 ~Wp~l~ 315 (346)
..+.|+
T Consensus 347 ~~~~l~ 352 (355)
T 3sre_A 347 FHKALY 352 (355)
T ss_dssp SSCEEE
T ss_pred CCCcee
Confidence 666443
No 212
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.52 E-value=5.1e-06 Score=79.94 Aligned_cols=208 Identities=15% Similarity=0.095 Sum_probs=134.5
Q ss_pred eeEEEEEEecCCCCcceeEEEecC-CEEEEEcCCCCCCeEEEEECCC----------CcEEEEecc-CCCeeEEEEEEeC
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALET----------GKVEAINQM-EGSYFGEGLTLLG 159 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~T----------gkv~~~~~l-~~~~FgeGit~~g 159 (346)
.+++...++|.... ..+.++++ +.++.+.+ .+..|++||+.+ ++.+..+.- ....++..+...+
T Consensus 118 ~~~~~~~~~h~~~v--~~l~~~p~~~~~lat~~--~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 118 KIEIEIKINHEGEV--NRARYMPQNACVIATKT--PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNL 193 (430)
T ss_dssp CEEEEEEEEESSCC--SEEEEETTEEEEEEEEC--SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTS
T ss_pred ceEEEEEEcCCCcE--EEEEECCCCCcEEEEEC--CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCC
Confidence 56778889996665 58999997 46776666 455899999987 444444432 2233332222334
Q ss_pred CEEEEEEeeCCEEEEEECCCCcE-------EEEEe-cC-CCceeEEeeCCCEEEE-ECCCCeEEEEeCCCC---cEEEEE
Q 019103 160 EKLFQVTWLQKTGFIYDQNNLNK-------LEEFT-HQ-MKDGWGLATDGKVLFG-SDGSSMLYQIDPQTL---KVIRKD 226 (346)
Q Consensus 160 ~~LY~ltw~~~~v~V~D~~tl~~-------i~ti~-~~-~peGwGLt~Dg~~Lyv-SdGs~~l~vIDp~T~---kvi~~I 226 (346)
..++++...++.+.++|..+... ...+. +. .-....++++++.+++ ...++.|.++|..+. +.+..+
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 43666667789999999987322 22332 21 1244556775555555 446899999999887 455555
Q ss_pred EeccCCeeeeeceeeEee-CC-EEEEEecCCCeEEEEeCCC-CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCE
Q 019103 227 IVRYKGREVRNLNELEFI-KG-EVWANVWQTDCIARISHED-GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNR 303 (346)
Q Consensus 227 ~V~~~G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~T-G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 303 (346)
.... .+ ++.+.+. ++ +++|....++.|.+.|..+ ++.+..+... ......|+|+|+++.
T Consensus 274 ~~~~--~~---v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-------------~~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 274 DAHT--AE---VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-------------KDEIFQVQWSPHNET 335 (430)
T ss_dssp ECCS--SC---EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-------------SSCEEEEEECSSCTT
T ss_pred ecCC--CC---eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-------------CCCEEEEEECCCCCC
Confidence 4322 22 3346665 34 5888877889999999998 4555555321 124678999999998
Q ss_pred EEEecCCCCcEEEEEEee
Q 019103 304 IFVTGKLWPKLYEINLRE 321 (346)
Q Consensus 304 LfVTGK~Wp~l~ev~l~~ 321 (346)
++++|...+.|.--++..
T Consensus 336 ~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 336 ILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEEETTSCCEEEEGGG
T ss_pred EEEEEeCCCcEEEEeCCC
Confidence 888887777776666543
No 213
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.52 E-value=1.3e-06 Score=88.56 Aligned_cols=201 Identities=8% Similarity=-0.069 Sum_probs=116.6
Q ss_pred ceeEEEecCCE-EEEEcCCC------CCCeEEEEECCCCcEEEEeccCCC----eeEEEEEEeCCEEEEEEeeCCEEEEE
Q 019103 107 TQGLLYAENDT-LFESTGLY------GRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQVTWLQKTGFIY 175 (346)
Q Consensus 107 TqGL~~~~d~~-LyeStGly------g~s~V~~iDl~Tgkv~~~~~l~~~----~FgeGit~~g~~LY~ltw~~~~v~V~ 175 (346)
...+.|+|||+ |..+.... ....|.+||+++|+. ..+..... .....++++|+.|..+.. +.++++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~ 139 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYC 139 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC--CeEEEE
Confidence 36899999996 43332211 126899999999986 33322111 223345667777666553 799999
Q ss_pred ECCCCcEEEEEecCC-C-------------------ceeEEeeCCCEEEEEC--C-------------------------
Q 019103 176 DQNNLNKLEEFTHQM-K-------------------DGWGLATDGKVLFGSD--G------------------------- 208 (346)
Q Consensus 176 D~~tl~~i~ti~~~~-p-------------------eGwGLt~Dg~~LyvSd--G------------------------- 208 (346)
|.++.+.......+. . .+..++|||++|+.+. +
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 999887665444321 1 2466899999876632 2
Q ss_pred -------CCeEEEEeCCCCcEEEEEEeccCCe-eeeeceeeEee-CCEEEEEe-c---CCCeEEEEeCCCCeEEEEEECC
Q 019103 209 -------SSMLYQIDPQTLKVIRKDIVRYKGR-EVRNLNELEFI-KGEVWANV-W---QTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 209 -------s~~l~vIDp~T~kvi~~I~V~~~G~-pv~~lNELE~~-~G~LyaNv-~---~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
..+|+++|.++.+....+....... .-..+..+.+. ||++++.. . ....|.++|+++|++...+...
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 299 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE 299 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec
Confidence 1279999998887544443321000 01122234444 67644322 1 1246889999999987655320
Q ss_pred chhhhhhhccCCCCceeeEEEEeCCCCEEEEe-cCCC------CcEEEEE
Q 019103 276 NLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT-GKLW------PKLYEIN 318 (346)
Q Consensus 276 ~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT-GK~W------p~l~ev~ 318 (346)
. .+. .......++|+|+|+.|+++ +... ..||.+.
T Consensus 300 ~-------~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 300 S-------EAW-LHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp C-------SSC-CCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred c-------CCE-EeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 0 000 00012368999999988765 4332 3576665
No 214
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.52 E-value=1.8e-05 Score=75.00 Aligned_cols=206 Identities=11% Similarity=-0.010 Sum_probs=131.5
Q ss_pred eeEE--EecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeC-CEEEEEEeeCCEEEEEECCCCcEE
Q 019103 108 QGLL--YAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLG-EKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 108 qGL~--~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g-~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
..+. +.+++.++.+.+ .+..|++||+.+++.+..+..+ ....-..++... +.+.++.-.++.+.++|..+.+.+
T Consensus 172 ~~~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 172 VRMRAFVNEEKSLLVALT--NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp EEEEEEECSSCEEEEEEE--TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 4444 346677777766 4569999999999998888653 111233445532 334444556789999999999999
Q ss_pred EEEecCCCce-eEE------eeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCe---------------------ee
Q 019103 184 EEFTHQMKDG-WGL------ATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGR---------------------EV 235 (346)
Q Consensus 184 ~ti~~~~peG-wGL------t~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~---------------------pv 235 (346)
.++..+.... ..+ ++|++.|+.+..++.|.++|..+.+.+.++.-..... ..
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSL 329 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSG
T ss_pred EEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccC
Confidence 9887531111 223 2456677777778899999999999888877432100 01
Q ss_pred eeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCc------------------------hhhhhhhccCCCCce
Q 019103 236 RNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPN------------------------LRERLVAAGYNGIDV 291 (346)
Q Consensus 236 ~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~------------------------l~~~~~~~~~~~~~v 291 (346)
..++.+.+.++..+++.-.++.|.+-|..+++.+..+.-.. ...........-.+.
T Consensus 330 ~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 409 (437)
T 3gre_A 330 NALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDI 409 (437)
T ss_dssp GGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCC
T ss_pred CceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccc
Confidence 12445667788877777778999999999999777664210 000000000001345
Q ss_pred eeEEEEeCC-CCEEEEecCCCCcEE
Q 019103 292 LNGIAWDSN-RNRIFVTGKLWPKLY 315 (346)
Q Consensus 292 lNGIA~d~~-~~~LfVTGK~Wp~l~ 315 (346)
.+.|++.++ ...+++||-..+.|.
T Consensus 410 I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 410 INSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EEEEEEEESSSSEEEEEEETTSCEE
T ss_pred eeeEeeeccCCceEEEEEcCCceEE
Confidence 678888887 467788877776654
No 215
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.52 E-value=5.9e-07 Score=83.15 Aligned_cols=189 Identities=8% Similarity=-0.044 Sum_probs=108.0
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc---EEEEe-ccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCc-
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGK---VEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN- 181 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk---v~~~~-~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~- 181 (346)
...+.|++++.++.+.+ .+..|++||+.+++ ..... ..........+..+++.|+... .++.+.++|.++.+
T Consensus 58 v~~~~~s~~~~~l~s~s--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 58 VTCVDWAPKSNRIVTCS--QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQEND 134 (377)
T ss_dssp EEEEEECTTTCCEEEEE--TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----
T ss_pred EEEEEEeCCCCEEEEEe--CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCccc
Confidence 47899999998777766 45699999999987 22222 2233333322223345555444 57899999998876
Q ss_pred --EEEEEec--C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCc------------------EEEEEEeccCCeeeeec
Q 019103 182 --KLEEFTH--Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLK------------------VIRKDIVRYKGREVRNL 238 (346)
Q Consensus 182 --~i~ti~~--~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~k------------------vi~~I~V~~~G~pv~~l 238 (346)
.+..+.. . .-....+++|++.|+....++.|.++|..+.+ .+.++ .+..+ +
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---v 208 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGW---V 208 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSS---E
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCce---E
Confidence 3666653 2 12345577899988887778899999986433 22222 11112 2
Q ss_pred eeeEee-CCEEEEEecCCCeEEEEeCCCCeE----EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCc
Q 019103 239 NELEFI-KGEVWANVWQTDCIARISHEDGVV----LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPK 313 (346)
Q Consensus 239 NELE~~-~G~LyaNv~~sn~I~vID~~TG~V----v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~ 313 (346)
+.+.+. +|+.+|..-.++.|.+.|..+++. +..+.. .......++|+|+++.|...+ .+.
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~--~~~ 273 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKL-------------SQLPLRSLLWANESAIVAAGY--NYS 273 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEEC-------------SSSCEEEEEEEETTEEEEEES--SSS
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecC-------------CCCceEEEEEcCCCCEEEEEc--CCc
Confidence 345554 566555555678999999999876 333322 123467899999987654443 344
Q ss_pred EEEEEE
Q 019103 314 LYEINL 319 (346)
Q Consensus 314 l~ev~l 319 (346)
+.....
T Consensus 274 ~~~~~~ 279 (377)
T 3dwl_C 274 PILLQG 279 (377)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 444433
No 216
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.51 E-value=6.5e-06 Score=74.48 Aligned_cols=208 Identities=11% Similarity=-0.010 Sum_probs=126.7
Q ss_pred EEEEecCCCCcceeEEEecCCE-EEEEcCCCCCCeEEEEEC-CCCcEEEEec--cCCCeeEEEEEEe-CCEEEEEEeeCC
Q 019103 96 VNEFPHDPRAFTQGLLYAENDT-LFESTGLYGRSSVRRVAL-ETGKVEAINQ--MEGSYFGEGLTLL-GEKLFQVTWLQK 170 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl-~Tgkv~~~~~--l~~~~FgeGit~~-g~~LY~ltw~~~ 170 (346)
...+.|... ...+.+++++. ++.+.+ .+..|.+||+ .+++...... ...... .++.. ++.++. .-.++
T Consensus 50 ~~~~~~~~~--v~~~~~~~~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~v~--~l~~~~~~~l~s-~~~d~ 122 (342)
T 1yfq_A 50 LQSLRYKHP--LLCCNFIDNTDLQIYVGT--VQGEILKVDLIGSPSFQALTNNEANLGIC--RICKYGDDKLIA-ASWDG 122 (342)
T ss_dssp EEEEECSSC--EEEEEEEESSSEEEEEEE--TTSCEEEECSSSSSSEEECBSCCCCSCEE--EEEEETTTEEEE-EETTS
T ss_pred eeeeecCCc--eEEEEECCCCCcEEEEEc--CCCeEEEEEeccCCceEeccccCCCCceE--EEEeCCCCEEEE-EcCCC
Confidence 344456433 37899999888 666666 4569999999 9998733333 333333 34444 455554 44679
Q ss_pred EEEEEECCC---------CcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCC-CcEEEEEEeccCCeeeeecee
Q 019103 171 TGFIYDQNN---------LNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGREVRNLNE 240 (346)
Q Consensus 171 ~v~V~D~~t---------l~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~~~G~pv~~lNE 240 (346)
.+.++|..+ .+.+.++.++ ..-+.++...+.++++..++.|.++|..+ ++............+ ++.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~---i~~ 198 (342)
T 1yfq_A 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVK-NKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ---IRD 198 (342)
T ss_dssp EEEEECHHHHTTBCEEEEESCSSSSSSC-CCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSC---EEE
T ss_pred eEEEEcccccccccccccCCeeeEEeeC-CceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCc---eeE
Confidence 999999988 7777777754 34445555555577777788999999988 554222222111122 234
Q ss_pred eEee--CCEEEEEecCCCeEEEEeCCCC------eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 241 LEFI--KGEVWANVWQTDCIARISHEDG------VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 241 LE~~--~G~LyaNv~~sn~I~vID~~TG------~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
+.+. +|..++.....+.|.+.|.+++ +.+..+....... .+.......+.++|+|+++.|++.+ ...
T Consensus 199 i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~s~~~~~l~~~~-~dg 273 (342)
T 1yfq_A 199 VALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL----KDTNLAYPVNSIEFSPRHKFLYTAG-SDG 273 (342)
T ss_dssp EEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT----TCCSSCCCEEEEEECTTTCCEEEEE-TTS
T ss_pred EEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccc----cccccceeEEEEEEcCCCCEEEEec-CCc
Confidence 5555 4666665556788888777766 5555554321100 0001123578899999988776655 445
Q ss_pred cEEEEEE
Q 019103 313 KLYEINL 319 (346)
Q Consensus 313 ~l~ev~l 319 (346)
.|+-.++
T Consensus 274 ~i~vwd~ 280 (342)
T 1yfq_A 274 IISCWNL 280 (342)
T ss_dssp CEEEEET
T ss_pred eEEEEcC
Confidence 5554443
No 217
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.51 E-value=7.7e-06 Score=79.66 Aligned_cols=186 Identities=12% Similarity=0.042 Sum_probs=121.0
Q ss_pred eeEEE---ecCCEEEEEcC-----------CCCCCeEEEEECC---CCcEEEEeccC----C-------Ce-eEEEEEEe
Q 019103 108 QGLLY---AENDTLFESTG-----------LYGRSSVRRVALE---TGKVEAINQME----G-------SY-FGEGLTLL 158 (346)
Q Consensus 108 qGL~~---~~d~~LyeStG-----------lyg~s~V~~iDl~---Tgkv~~~~~l~----~-------~~-FgeGit~~ 158 (346)
.||.+ +++++||+..- ..|.+.|.++|+. ||+++..+.|. . .+ ...+++.+
T Consensus 66 sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD 145 (334)
T 2p9w_A 66 SGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD 145 (334)
T ss_dssp EEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC
T ss_pred eEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC
Confidence 69999 68899988421 0246889999999 99988877763 1 33 36778887
Q ss_pred C-CEEEEEEeeC-CEEEEEECCCCcEEEEEecC--------CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEe
Q 019103 159 G-EKLFQVTWLQ-KTGFIYDQNNLNKLEEFTHQ--------MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV 228 (346)
Q Consensus 159 g-~~LY~ltw~~-~~v~V~D~~tl~~i~ti~~~--------~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V 228 (346)
. +.+|++.-.. +.|+.+|++-.+ +..+... .+.|.+++|||+.|+++++..+|+.+|..+.. ...|++
T Consensus 146 ~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv-~~~v~~ 223 (334)
T 2p9w_A 146 RDGNSYVAFALGMPAIARVSADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY-AWPEPV 223 (334)
T ss_dssp TTSCEEEEEEESSCEEEEECTTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS-CCCEEC
T ss_pred CCCCEEEeCCCCCCeEEEEeCCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc-ceeecc
Confidence 5 6899998889 999999987543 3333211 24599999999999999998999999987431 113555
Q ss_pred ccCCe--eeeeceee-Ee-eCCEE-EEEecCCCeEEEEeCCCCe---EEEEEECCchhhhhhhccCCCCceeeEEEEe--
Q 019103 229 RYKGR--EVRNLNEL-EF-IKGEV-WANVWQTDCIARISHEDGV---VLGWVLLPNLRERLVAAGYNGIDVLNGIAWD-- 298 (346)
Q Consensus 229 ~~~G~--pv~~lNEL-E~-~~G~L-yaNv~~sn~I~vID~~TG~---Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d-- 298 (346)
...|. ....+.-| .. .+|++ +|+....+.+++.+.+.-+ ++++++. ...++|+|.+
T Consensus 224 ~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~~~--------------~~~~~g~tt~t~ 289 (334)
T 2p9w_A 224 KINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRS--------------ELQNSGFTAVAD 289 (334)
T ss_dssp EESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEECG--------------GGGSSCEEEEEE
T ss_pred cccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeeecC--------------ccccCceeEEEE
Confidence 31121 11122222 22 37775 8877665556555554433 3333321 1114677776
Q ss_pred ---CCCCEEEEecC
Q 019103 299 ---SNRNRIFVTGK 309 (346)
Q Consensus 299 ---~~~~~LfVTGK 309 (346)
..++++||...
T Consensus 290 ~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 290 YYQGSEQGLYAVSA 303 (334)
T ss_dssp EEETTEEEEEEEEC
T ss_pred eccccCCeEEEEee
Confidence 56688898753
No 218
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.51 E-value=2e-05 Score=71.75 Aligned_cols=210 Identities=10% Similarity=-0.013 Sum_probs=124.0
Q ss_pred eEEEEEEecCCCCcceeEEEecC--CEEEEEcCCCCCCeEEEEECCCCcE--EEEecc-CCCeeEEEEEEeC-CEEEEEE
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKV--EAINQM-EGSYFGEGLTLLG-EKLFQVT 166 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d--~~LyeStGlyg~s~V~~iDl~Tgkv--~~~~~l-~~~~FgeGit~~g-~~LY~lt 166 (346)
.+.+.++.. ...-...+.++++ +.++.+.+ .+..|++||+.+++. +....- ........+...+ +.++++.
T Consensus 45 ~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 121 (379)
T 3jrp_A 45 HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 121 (379)
T ss_dssp EEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred ceeeeEecC-CCCcEEEEEeCCCCCCCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe
Confidence 345555542 1233378999865 67777766 456999999999974 333332 2333333233331 3455555
Q ss_pred eeCCEEEEEECCCCcEEEEEec---C-CCceeEEee-------------CCCEEEEECCCCeEEEEeCCCCcEEEEEEe-
Q 019103 167 WLQKTGFIYDQNNLNKLEEFTH---Q-MKDGWGLAT-------------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIV- 228 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~i~ti~~---~-~peGwGLt~-------------Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V- 228 (346)
-.++.+.++|..+.+....+.. . .-....+++ |++.+++...++.|.++|..+.+....+..
T Consensus 122 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 201 (379)
T 3jrp_A 122 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 201 (379)
T ss_dssp ETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred cCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE
Confidence 6789999999988754443322 1 112334556 688888877788999999877654322221
Q ss_pred -ccCCeeeeeceeeEee-C---CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCE
Q 019103 229 -RYKGREVRNLNELEFI-K---GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNR 303 (346)
Q Consensus 229 -~~~G~pv~~lNELE~~-~---G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 303 (346)
..+..+ ++.+.+. + +.+++..-.+..|.+.|..+++......+.... ........++|+|+++.
T Consensus 202 ~~~h~~~---v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 202 LEGHSDW---VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE--------KFPDVLWRASWSLSGNV 270 (379)
T ss_dssp ECCCSSC---EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS--------CCSSCEEEEEECSSSCC
T ss_pred EecccCc---EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccc--------cCCCcEEEEEEcCCCCE
Confidence 112222 2345555 4 677777777888999999887521111110110 12345788999999998
Q ss_pred EEEecCCCCcEEEE
Q 019103 304 IFVTGKLWPKLYEI 317 (346)
Q Consensus 304 LfVTGK~Wp~l~ev 317 (346)
|++++. .+.++--
T Consensus 271 l~~~~~-dg~i~iw 283 (379)
T 3jrp_A 271 LALSGG-DNKVTLW 283 (379)
T ss_dssp EEEEES-SSSEEEE
T ss_pred EEEecC-CCcEEEE
Confidence 887765 3444333
No 219
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.50 E-value=4.1e-06 Score=75.83 Aligned_cols=186 Identities=7% Similarity=-0.053 Sum_probs=119.5
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc----EEEEeccCCCeeEEEEEEeCC-EEEEEEeeCCEEEEEEC-CC
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGK----VEAINQMEGSYFGEGLTLLGE-KLFQVTWLQKTGFIYDQ-NN 179 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk----v~~~~~l~~~~FgeGit~~g~-~LY~ltw~~~~v~V~D~-~t 179 (346)
....+.|++++.++.+++ .+..|++||+.+++ ...............+..+++ .|+... .++.+.++|. ++
T Consensus 13 ~v~~~~~s~~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDLIGS 89 (342)
T ss_dssp CEEEEEEEGGGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECSSSS
T ss_pred cEEEEEEcCCCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEeccC
Confidence 347999999887666666 45699999999988 555444555555555555666 565554 6789999999 87
Q ss_pred CcEEEEEe---cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCC---------CcEEEEEEeccCCeeeeeceeeEeeCC
Q 019103 180 LNKLEEFT---HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQT---------LKVIRKDIVRYKGREVRNLNELEFIKG 246 (346)
Q Consensus 180 l~~i~ti~---~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T---------~kvi~~I~V~~~G~pv~~lNELE~~~G 246 (346)
.+. .++. +. .-....+++ ++.|+.+..++.|.++|..+ .+.+.++.. .. .+..+.+..+
T Consensus 90 ~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~---~~---~v~~~~~~~~ 161 (342)
T 1yfq_A 90 PSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKV---KN---KIFTMDTNSS 161 (342)
T ss_dssp SSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSS---CC---CEEEEEECSS
T ss_pred Cce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEee---CC---ceEEEEecCC
Confidence 766 4443 22 113344567 88888877889999999887 544433331 11 2234666666
Q ss_pred EEEEEecCCCeEEEEeCCC-CeEE-EEEECCchhhhhhhccCCCCceeeEEEEeC-CCCEEEEecCCCCcEEE
Q 019103 247 EVWANVWQTDCIARISHED-GVVL-GWVLLPNLRERLVAAGYNGIDVLNGIAWDS-NRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~T-G~Vv-~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~-~~~~LfVTGK~Wp~l~e 316 (346)
.+++. -..+.|.+.|..+ ++.. ..... ........|+|+| +++.+++++. .+.+.-
T Consensus 162 ~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~i~~i~~~~~~~~~l~~~~~-dg~i~i 220 (342)
T 1yfq_A 162 RLIVG-MNNSQVQWFRLPLCEDDNGTIEES------------GLKYQIRDVALLPKEQEGYACSSI-DGRVAV 220 (342)
T ss_dssp EEEEE-ESTTEEEEEESSCCTTCCCEEEEC------------SCSSCEEEEEECSGGGCEEEEEET-TSEEEE
T ss_pred cEEEE-eCCCeEEEEECCccccccceeeec------------CCCCceeEEEECCCCCCEEEEEec-CCcEEE
Confidence 65544 3577899999988 6532 11211 1123468899999 8877666554 454443
No 220
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.50 E-value=4.6e-05 Score=68.80 Aligned_cols=123 Identities=14% Similarity=0.103 Sum_probs=85.2
Q ss_pred CCcceeEEEecC---CEEEEEcCCCCCCeEEEEECCC-CcEE-EEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEEC
Q 019103 104 RAFTQGLLYAEN---DTLFESTGLYGRSSVRRVALET-GKVE-AINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQ 177 (346)
Q Consensus 104 ~~FTqGL~~~~d---~~LyeStGlyg~s~V~~iDl~T-gkv~-~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~ 177 (346)
......+.|+++ |.++.+++ .+..|++||+.+ ++.. ....- ........+..+++.|+ +.-.++.+.++|.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF-TASCDKTAKMWDL 115 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE-EEETTSEEEEEET
T ss_pred CCceEEEEEcCCCCCceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE-EEcCCCcEEEEEc
Confidence 334479999998 57777766 456999999998 6554 33332 23333322233345555 4456799999999
Q ss_pred CCCcEEEEEecCC-CceeEE--eeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec
Q 019103 178 NNLNKLEEFTHQM-KDGWGL--ATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 178 ~tl~~i~ti~~~~-peGwGL--t~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~ 229 (346)
++.+.+....+.. -....+ ++|++.|+.+..++.|.++|..+.+.+.++...
T Consensus 116 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 116 SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp TTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred CCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 9999888777641 233344 667888888777899999999999888777654
No 221
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.50 E-value=2e-05 Score=85.15 Aligned_cols=200 Identities=8% Similarity=-0.009 Sum_probs=136.5
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCC-EEEEEEeeCCE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGE-KLFQVTWLQKT 171 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~-~LY~ltw~~~~ 171 (346)
+.+.++.. .......+.|++|+.++.+++ .+..|++||+.+|+.+....-.. ......+...++ .+.++.-.++.
T Consensus 648 ~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 648 EKLLDIKA-HEDEVLCCAFSSDDSYIATCS--ADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp CEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CEEEEecc-CCCCEEEEEEecCCCEEEEEe--CCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 34555552 233447999999998777777 55699999999999988876433 232322223324 34555667889
Q ss_pred EEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCe----ee----eeceee
Q 019103 172 GFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGR----EV----RNLNEL 241 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~----pv----~~lNEL 241 (346)
+.++|..+.+.+.++... .-....+++|++.|++...++.|.++|..+.+...++.+...-. +. ..+.-+
T Consensus 725 v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 804 (1249)
T 3sfz_A 725 LKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCC 804 (1249)
T ss_dssp EEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCC
T ss_pred EEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEE
Confidence 999999999999888642 12445578899999888778899999999999988887643100 00 011112
Q ss_pred Eee-CC-EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 242 EFI-KG-EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 242 E~~-~G-~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
.+. +| .+.+.. .+.|.+.|..+++.+..+.... ......++|+|+++.+++++..
T Consensus 805 ~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~------------~~~v~~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 805 SWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGH------------HSTIQYCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp CBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEECSS------------SSCCCEEEECSSTTEEEEECSS
T ss_pred EECCCCCEEEEEc--CCcEEEEEecCCCceeEEcCCC------------CCceEEEEEcCCCCEEEEEeCC
Confidence 232 45 444443 7899999999999988885411 1245679999999887776543
No 222
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.49 E-value=6.9e-05 Score=66.44 Aligned_cols=200 Identities=9% Similarity=-0.033 Sum_probs=126.7
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeCC
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQK 170 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~~ 170 (346)
.++.+.++... ......+.+ +++.++.+.+ .+..|++||+.+++........ .......+..+++.|+. .-.++
T Consensus 7 ~~~~~~~l~~h-~~~v~~~~~-~~~~~l~s~~--~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg 81 (313)
T 3odt_A 7 GYQLSATLKGH-DQDVRDVVA-VDDSKVASVS--RDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLF-GGKDT 81 (313)
T ss_dssp CCEEEEEECCC-SSCEEEEEE-EETTEEEEEE--TTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEE-EETTS
T ss_pred cHHHHHHhhCC-CCCcEEEEe-cCCCEEEEEE--cCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEE-ecCCC
Confidence 46777777532 333478999 6776566666 4569999999999887777653 33333333334454544 45678
Q ss_pred EEEEEECCCC---cEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--C
Q 019103 171 TGFIYDQNNL---NKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--K 245 (346)
Q Consensus 171 ~v~V~D~~tl---~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~ 245 (346)
.+.++|..+. +.+.++......-..++.+++.|+++..++.|.++| +.+.+..+.... .++. .+.+. +
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~--~~v~---~~~~~~~~ 154 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHN--ASVW---DAKVVSFS 154 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCS--SCEE---EEEEEETT
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCC--Ccee---EEEEccCC
Confidence 8998887654 455555432234456788899998888889999999 556665555432 2322 23333 4
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+..++..-.+..|.+.| .++.+..+.. ......+.++++|++. +++|-..+.++-..+
T Consensus 155 ~~~l~~~~~d~~i~i~d--~~~~~~~~~~------------~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 155 ENKFLTASADKTIKLWQ--NDKVIKTFSG------------IHNDVVRHLAVVDDGH--FISCSNDGLIKLVDM 212 (313)
T ss_dssp TTEEEEEETTSCEEEEE--TTEEEEEECS------------SCSSCEEEEEEEETTE--EEEEETTSEEEEEET
T ss_pred CCEEEEEECCCCEEEEe--cCceEEEEec------------cCcccEEEEEEcCCCe--EEEccCCCeEEEEEC
Confidence 54445455678898998 5555555532 1123568899999887 556666666655544
No 223
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.48 E-value=4.6e-05 Score=72.91 Aligned_cols=183 Identities=10% Similarity=-0.014 Sum_probs=123.1
Q ss_pred ecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecCCCc
Q 019103 113 AENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKD 192 (346)
Q Consensus 113 ~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~pe 192 (346)
..|+..+++.+ .+..|++||+.+++......-.... -..++.+++.| ++.-.++.+.++|.++.+.+.++......
T Consensus 140 ~~d~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~l-~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 215 (435)
T 1p22_A 140 QYDDQKIVSGL--RDNTIKIWDKNTLECKRILTGHTGS-VLCLQYDERVI-ITGSSDSTVRVWDVNTGEMLNTLIHHCEA 215 (435)
T ss_dssp ECCSSEEEEEE--SSSCEEEEESSSCCEEEEECCCSSC-EEEEECCSSEE-EEEETTSCEEEEESSSCCEEEEECCCCSC
T ss_pred EECCCEEEEEe--CCCeEEEEeCCCCeEEEEEcCCCCc-EEEEEECCCEE-EEEcCCCeEEEEECCCCcEEEEEcCCCCc
Confidence 34566666656 4569999999999988877643322 23456655544 44456799999999999999998754334
Q ss_pred eeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec-cCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEE
Q 019103 193 GWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR-YKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGW 271 (346)
Q Consensus 193 GwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~-~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~ 271 (346)
-..++.+++.+++...++.|.++|..+.+......+- .+..+ ++.+.+.+..+++.. .++.|.+.|..+++.+..
T Consensus 216 v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 216 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAA---VNVVDFDDKYIVSAS-GDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSC---EEEEEEETTEEEEEE-TTSEEEEEETTTCCEEEE
T ss_pred EEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCc---EEEEEeCCCEEEEEe-CCCeEEEEECCcCcEEEE
Confidence 4567888888888777889999999887765432221 12222 345666555565554 588999999999999988
Q ss_pred EECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 272 VLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 272 I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+.-. ......++++ ++ ++++|-..+.|.-..+
T Consensus 292 ~~~~-------------~~~v~~~~~~--~~-~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 292 LNGH-------------KRGIACLQYR--DR-LVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EECC-------------SSCEEEEEEE--TT-EEEEEETTSCEEEEET
T ss_pred EcCC-------------CCcEEEEEeC--CC-EEEEEeCCCeEEEEEC
Confidence 8531 1234678885 33 4555555566555443
No 224
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.48 E-value=3.6e-05 Score=72.70 Aligned_cols=210 Identities=11% Similarity=0.100 Sum_probs=131.2
Q ss_pred eeEEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC------------CeeEEE----
Q 019103 92 TIQVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG------------SYFGEG---- 154 (346)
Q Consensus 92 t~~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~------------~~FgeG---- 154 (346)
+....+++. | ......+.|+|++.++.|++ .+..|++||+.+++....+.... ..++-|
T Consensus 55 ~~~~~~~l~gH--~~~V~~~~~sp~~~~l~s~s--~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 55 DLVCCRTLQGH--SGKVYSLDWTPEKNWIVSAS--QDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp CCEEEEEECCC--SSCEEEEEECTTSSCEEEEE--TTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS
T ss_pred eeEEeeccccc--ccEEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 355666665 4 33357999999998888887 55699999999998776654321 111100
Q ss_pred --------------------------------EEE--eCCEEEEEEeeCCEEEEEECCCCcEEEEEecCC-----CceeE
Q 019103 155 --------------------------------LTL--LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM-----KDGWG 195 (346)
Q Consensus 155 --------------------------------it~--~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~-----peGwG 195 (346)
+.. .++..+++.-.++.+.++|..+.+.+..+.... ..-..
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 000 112223344557889999999999888874321 12223
Q ss_pred Ee--e-CCCEEEEECCCCeEEEEeCCC-CcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEE
Q 019103 196 LA--T-DGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLG 270 (346)
Q Consensus 196 Lt--~-Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~ 270 (346)
++ + +++.++....+.+|.++|..+ .+.+.++.-.. . .++.+.+. +|..+++.-.+.+|.+.|..+|+.+.
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~--~---~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE--G---DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS--S---CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcC--C---CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 33 3 566666666688999999873 34444332211 1 23456665 67777777788999999999999988
Q ss_pred EEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 271 WVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 271 ~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
.+....-.. .........+||+|+++.|+..+ ..+.++--
T Consensus 286 ~~~~~~~~~------~~~~~~v~~~~~s~~g~~l~~g~-~dg~i~vw 325 (380)
T 3iz6_a 286 VYNREPDRN------DNELPIVTSVAFSISGRLLFAGY-SNGDCYVW 325 (380)
T ss_dssp EECCCCSSS------CCSSCSCSEEEECSSSSEEEEEC-TTSCEEEE
T ss_pred Eeccccccc------ccccCceEEEEECCCCCEEEEEE-CCCCEEEE
Confidence 885421110 01122467899999988776654 44555443
No 225
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.47 E-value=9.8e-06 Score=77.84 Aligned_cols=200 Identities=15% Similarity=0.132 Sum_probs=121.5
Q ss_pred eeEEEec----CCEEEEEcCCC---C--CCeEEEEECCCC--cEEEE--e--ccC----CCeeEEEEEEe-CCEEEEEEe
Q 019103 108 QGLLYAE----NDTLFESTGLY---G--RSSVRRVALETG--KVEAI--N--QME----GSYFGEGLTLL-GEKLFQVTW 167 (346)
Q Consensus 108 qGL~~~~----d~~LyeStGly---g--~s~V~~iDl~Tg--kv~~~--~--~l~----~~~FgeGit~~-g~~LY~ltw 167 (346)
.||+++| ++.||++.... | .++|.+++++.+ ++... + .++ ...++.+|+.. ++.||+++.
T Consensus 69 ~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 69 LDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 6999998 47899884311 1 458999887643 32211 1 222 23567778885 369999985
Q ss_pred e-------------CCEEEEEECCCC------------cEEEEEecCC--CceeEEeeCCCEEEEEC-C---CCeEEEEe
Q 019103 168 L-------------QKTGFIYDQNNL------------NKLEEFTHQM--KDGWGLATDGKVLFGSD-G---SSMLYQID 216 (346)
Q Consensus 168 ~-------------~~~v~V~D~~tl------------~~i~ti~~~~--peGwGLt~Dg~~LyvSd-G---s~~l~vID 216 (346)
. .++|+.+|++.. .....+.++. |.|++++++.+.||++| | .++|..|.
T Consensus 149 d~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~ 228 (353)
T 2g8s_A 149 ENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQ 228 (353)
T ss_dssp CTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCC
T ss_pred CCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEec
Confidence 5 358999998642 1233445553 44555555578999998 5 34777765
Q ss_pred CCCCc----EEE-------EEE----eccCC--eeee------eceeeEee--------CCEEEEEecCCCeEEEEeCCC
Q 019103 217 PQTLK----VIR-------KDI----VRYKG--REVR------NLNELEFI--------KGEVWANVWQTDCIARISHED 265 (346)
Q Consensus 217 p~T~k----vi~-------~I~----V~~~G--~pv~------~lNELE~~--------~G~LyaNv~~sn~I~vID~~T 265 (346)
+...= ... .+. -...+ .|+. .+.-+.+. +|.+|++.+..+.|.+++.+.
T Consensus 229 ~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~ 308 (353)
T 2g8s_A 229 KGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG 308 (353)
T ss_dssp TTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET
T ss_pred cCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC
Confidence 42210 000 000 00000 0110 12224443 589999999999999999998
Q ss_pred CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEE-ecCCCCcEEEEE
Q 019103 266 GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFV-TGKLWPKLYEIN 318 (346)
Q Consensus 266 G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfV-TGK~Wp~l~ev~ 318 (346)
++++..-.+ +.. ...-|.+|+++|||. ||| |...-++||+|.
T Consensus 309 ~~~~~~~~~--~~~--------~~~rp~~v~~~pdG~-lyv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 309 DKVTEDGRI--LTD--------RGQRIRDVRTGPDGY-LYVLTDESSGELLKVS 351 (353)
T ss_dssp TEEEEEEEE--SGG--------GCCCEEEEEECTTSC-EEEEECSTTEEEEEEE
T ss_pred CeEeeeEEc--ccC--------CCCceeEEEECCCCc-EEEEEeCCCCEEEEEe
Confidence 887766533 111 122589999999987 666 566678899885
No 226
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.47 E-value=1.9e-05 Score=82.13 Aligned_cols=162 Identities=17% Similarity=0.129 Sum_probs=111.8
Q ss_pred eEEEecC-CEEEEEcCCC------------C----CCeEEEEECCCCcEEEEeccCC----------CeeEEEEEEeCC-
Q 019103 109 GLLYAEN-DTLFESTGLY------------G----RSSVRRVALETGKVEAINQMEG----------SYFGEGLTLLGE- 160 (346)
Q Consensus 109 GL~~~~d-~~LyeStGly------------g----~s~V~~iDl~Tgkv~~~~~l~~----------~~FgeGit~~g~- 160 (346)
.++++++ +.+|++++.- | .+.|..+|++||+++=+.++.+ .+....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 3688764 5899997621 0 1369999999999988876532 122223444443
Q ss_pred -EEEEEEeeCCEEEEEECCCCcEEEEEecCC-C-------------------------------------ceeEEeeCCC
Q 019103 161 -KLFQVTWLQKTGFIYDQNNLNKLEEFTHQM-K-------------------------------------DGWGLATDGK 201 (346)
Q Consensus 161 -~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~-p-------------------------------------eGwGLt~Dg~ 201 (346)
.+++..-+++.++++|++|++++.+++... + .+.+++++.+
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g 393 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG 393 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC
Confidence 233344478999999999999996655320 0 1145777888
Q ss_pred EEEEE-C---------------------C--------------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeC
Q 019103 202 VLFGS-D---------------------G--------------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIK 245 (346)
Q Consensus 202 ~LyvS-d---------------------G--------------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~ 245 (346)
.+|+. + | ++.|+.+|+.|++++=+++.+.. .. ---+...+
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~-~~~~~t~g 469 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH---WN-GGTLSTAG 469 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS---CC-CCEEEETT
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC---Cc-CceeEeCC
Confidence 99982 1 1 26799999999999888877542 10 01244568
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
|.||+.. .+..|.++|.+||+++..+.++
T Consensus 470 g~vf~g~-~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 470 NLVFQGT-AAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp TEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEEC-CcccchhhhhhcChhheEecCC
Confidence 8999874 5889999999999999999873
No 227
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.45 E-value=4.2e-05 Score=77.37 Aligned_cols=188 Identities=16% Similarity=0.184 Sum_probs=127.3
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc--------CCCeeEEEEEEeCCEEEEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM--------EGSYFGEGLTLLGEKLFQV 165 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l--------~~~~FgeGit~~g~~LY~l 165 (346)
+.+.++.- .......+.|+|||.++.+++ .+..|++||..+|+.+..+.- ........+.++++.| ++
T Consensus 181 ~~~~~l~~-H~~~V~~v~fspdg~~las~s--~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l-~s 256 (611)
T 1nr0_A 181 KFKSTFGE-HTKFVHSVRYNPDGSLFASTG--GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI-AS 256 (611)
T ss_dssp EEEEEECC-CSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE-EE
T ss_pred eEeeeecc-ccCceEEEEECCCCCEEEEEE--CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEE-EE
Confidence 44555542 344568999999999888888 567999999999998777632 2233333333344544 44
Q ss_pred EeeCCEEEEEECCCCcEEEEEecC---CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeE
Q 019103 166 TWLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~~i~ti~~~---~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE 242 (346)
.-.++.+.++|..+++.+.+++.+ ....+++..+++.+.....++.+.++|+++.+....+.- +..+ ++.+.
T Consensus 257 ~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g--h~~~---v~~l~ 331 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG--HNKA---ITALS 331 (611)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC--CSSC---EEEEE
T ss_pred EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC--CCCC---EEEEE
Confidence 556899999999999999999753 123456777888888776788999999998875543321 2222 33455
Q ss_pred ee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC
Q 019103 243 FI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN 302 (346)
Q Consensus 243 ~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 302 (346)
+. +|+..++.-.++.|.+-|..+++....+.- .-.....++++++++.
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~------------~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDISTGISNRVFPD------------VHATMITGIKTTSKGD 380 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEECSSC------------SCSSCEEEEEECTTSC
T ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeeeccc------------CCcceEEEEEECCCCc
Confidence 54 565555555688999999999987543210 0123567899997653
No 228
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.45 E-value=7.8e-06 Score=80.22 Aligned_cols=181 Identities=14% Similarity=0.142 Sum_probs=115.1
Q ss_pred EEEEcCCCCCCeEEEE--ECCCCcEEEEe----ccC---CCeeEEEEEE--e--CCEEEEE-EeeCCEEEEEEC------
Q 019103 118 LFESTGLYGRSSVRRV--ALETGKVEAIN----QME---GSYFGEGLTL--L--GEKLFQV-TWLQKTGFIYDQ------ 177 (346)
Q Consensus 118 LyeStGlyg~s~V~~i--Dl~Tgkv~~~~----~l~---~~~FgeGit~--~--g~~LY~l-tw~~~~v~V~D~------ 177 (346)
+|.|.-..|.++|++| |++++++.... +++ ..+ .|+++ . .+++|+. +-+++.+..|+.
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~p--yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g 166 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEV--YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG 166 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSC--CCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCe--eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC
Confidence 5666552227899999 66777743331 221 344 45666 3 3545433 556688887665
Q ss_pred -CCCcEEEEEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCC-----CCcEEEEEEeccCCeeeeeceeeEee--C---
Q 019103 178 -NNLNKLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQ-----TLKVIRKDIVRYKGREVRNLNELEFI--K--- 245 (346)
Q Consensus 178 -~tl~~i~ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~-----T~kvi~~I~V~~~G~pv~~lNELE~~--~--- 245 (346)
-+.+++++|+.+ .+||..+.+..++||+++.+.-|+.+|++ +.+++..+..+. -..-..-|... .
T Consensus 167 ~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~---l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 167 YISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRH---LTRDIEGLTIYYAADGK 243 (355)
T ss_dssp CEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSS---BCSCEEEEEEEECGGGC
T ss_pred cccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCc---cccCcceEEEEecCCCC
Confidence 355888999986 58999999999999999987789999954 366665553321 11011114332 2
Q ss_pred CEEEEEecCCCeEEEEeCC-CCeEEEEEECCchhh--hhhh------ccCCCC-ceeeEEEEeCCCCE
Q 019103 246 GEVWANVWQTDCIARISHE-DGVVLGWVLLPNLRE--RLVA------AGYNGI-DVLNGIAWDSNRNR 303 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~-TG~Vv~~I~l~~l~~--~~~~------~~~~~~-~vlNGIA~d~~~~~ 303 (346)
|+|+|.+...|...++|.+ +.+.++.+.+.+-.. ...+ ...+.+ ..|+|+.+..|+..
T Consensus 244 gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~~~~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n 311 (355)
T 3amr_A 244 GYLMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGEN 311 (355)
T ss_dssp EEEEEEEGGGTEEEEEESSTTCCEEEEEEECCCSSSCCCCSCCCEEEECSCCSTTCTTCEEEEEESSC
T ss_pred EEEEEEcCCCCEEEEEECCCCCcEEEEEEecCCCCceeeeccCcceEEccccCCCCCCcEEEEecCCc
Confidence 5899999999999999997 899999996532110 0000 011222 36777777776643
No 229
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.43 E-value=3.9e-05 Score=71.19 Aligned_cols=206 Identities=11% Similarity=0.047 Sum_probs=119.9
Q ss_pred EEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCC-----------E
Q 019103 95 VVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGE-----------K 161 (346)
Q Consensus 95 Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~-----------~ 161 (346)
.+.++. |. .....+.|+|++..+.+++ .+..|++||+........... .....-..+....+ .
T Consensus 110 ~~~~~~~h~--~~v~~v~~sp~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 2xzm_R 110 TYKRFVGHQ--SEVYSVAFSPDNRQILSAG--AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAP 185 (343)
T ss_dssp EEEEEECCC--SCEEEEEECSSTTEEEEEE--TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCC
T ss_pred EEEEEcCCC--CcEEEEEECCCCCEEEEEc--CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCC
Confidence 455554 43 3347899999998777777 556999999985433222211 11111222333221 3
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCC-CcEEEEEEeccCCeeeeec
Q 019103 162 LFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVRYKGREVRNL 238 (346)
Q Consensus 162 LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~~~G~pv~~l 238 (346)
++++.-.++.+.++| .+.+...++... .-....+++||+.|.....++.|.++|..+ ......... +.+ +
T Consensus 186 ~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~---~~~---v 258 (343)
T 2xzm_R 186 YFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA---GST---I 258 (343)
T ss_dssp EEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC---SSC---E
T ss_pred EEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC---CCc---E
Confidence 455556689999999 456666666532 123455788999998877789999999844 333333322 122 3
Q ss_pred eeeEee-CCEEEEEecCCCeEEEEeCCCCeEEE--EEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 239 NELEFI-KGEVWANVWQTDCIARISHEDGVVLG--WVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 239 NELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~--~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
+.+.+. ++.+.+ .-.++.|.+.|..+++... ++....+...... .......+.+||+|+++.|+..+ ....+.
T Consensus 259 ~~v~~sp~~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~g~~l~sg~-~Dg~v~ 334 (343)
T 2xzm_R 259 NQIAFNPKLQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQ--KGKNPQCTSLAWNALGKKLFAGF-TDGVIR 334 (343)
T ss_dssp EEEEECSSSCEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTB--CCSCCCEEEEEECSSSCCEEEEE-TTSEEE
T ss_pred EEEEECCCCCEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhh--cCCCCceEEEEECCCCCeEEEec-CCceEE
Confidence 456565 444443 3346779999999887654 3322111110000 01123468899999999876654 445443
No 230
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.42 E-value=5.4e-06 Score=79.89 Aligned_cols=159 Identities=14% Similarity=0.132 Sum_probs=95.9
Q ss_pred EEEEEEe-CCEEEEEEeeCCEEEEEECCCCc-EEEEEec-----CCCceeEEeeC---CCEEEEECC----C----CeEE
Q 019103 152 GEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN-KLEEFTH-----QMKDGWGLATD---GKVLFGSDG----S----SMLY 213 (346)
Q Consensus 152 geGit~~-g~~LY~ltw~~~~v~V~D~~tl~-~i~ti~~-----~~peGwGLt~D---g~~LyvSdG----s----~~l~ 213 (346)
+++++.. +++||++... ++|+++|. +.+ .+..+++ ..+.|.++++| +++||+++. . +.|+
T Consensus 31 P~~ia~~pdG~l~V~e~~-g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERP-GRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp EEEEEEEETTEEEEEETT-TEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCC-CEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 5677765 4689998765 99999985 443 4444432 13677778888 889999874 2 7899
Q ss_pred EEeCCCC--cEEE-EEEec-cCCeeeeeceeeEee-CCEEEEEecC-------------CCeEEEEeCCCCeEEEEEECC
Q 019103 214 QIDPQTL--KVIR-KDIVR-YKGREVRNLNELEFI-KGEVWANVWQ-------------TDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 214 vIDp~T~--kvi~-~I~V~-~~G~pv~~lNELE~~-~G~LyaNv~~-------------sn~I~vID~~TG~Vv~~I~l~ 275 (346)
.+++... ++.. ++.+. ..+...++.+.|.+. ||+||++.-. ...|.+||++ |++ .-.
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~----p~~ 183 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRP----PAD 183 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCC----CTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCC----CCC
Confidence 9987653 2211 11111 111223455667776 7899998642 2478888886 331 000
Q ss_pred ch--hhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 276 NL--RERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 276 ~l--~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+- ...+.. .....|+|||+||++++||++.-.....-||.+.
T Consensus 184 npf~~~~i~a---~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i 227 (354)
T 3a9g_A 184 NPFPNSPIWS---YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNII 227 (354)
T ss_dssp SSSTTCCEEE---ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEE
T ss_pred CCCCCCcEEE---EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEe
Confidence 00 000000 0112579999999888899987666555555543
No 231
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.40 E-value=0.00014 Score=64.35 Aligned_cols=167 Identities=8% Similarity=-0.015 Sum_probs=104.0
Q ss_pred eEEEEEEecCCCCcceeEEEec--CCEEEEEcCCCCCCeEEEEECCCCc---------EEEEecc-CCCeeEEEEEEeC-
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGK---------VEAINQM-EGSYFGEGLTLLG- 159 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgk---------v~~~~~l-~~~~FgeGit~~g- 159 (346)
.+.+.++.. .......+.|++ |+.++.+.+ .+..|++||+.+++ ......- .... ..++...
T Consensus 47 ~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~~~ 121 (351)
T 3f3f_A 47 WELSDSWRA-HDSSIVAIDWASPEYGRIIASAS--YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL--YSVKFAPA 121 (351)
T ss_dssp EEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCE--EEEEECCG
T ss_pred ceecceecc-CCCcEEEEEEcCCCCCCEEEEEc--CCCeEEEEecCCCcccccccCcceeeeecccCCce--eEEEEcCC
Confidence 345666653 233347999987 577777766 45699999999873 3444432 2333 3344432
Q ss_pred --CEEEEEEeeCCEEEEEECCCCcEEEEEec------------C---CCceeEEeeC---CCEEEEECCCCeEEEEeCCC
Q 019103 160 --EKLFQVTWLQKTGFIYDQNNLNKLEEFTH------------Q---MKDGWGLATD---GKVLFGSDGSSMLYQIDPQT 219 (346)
Q Consensus 160 --~~LY~ltw~~~~v~V~D~~tl~~i~ti~~------------~---~peGwGLt~D---g~~LyvSdGs~~l~vIDp~T 219 (346)
+.++++.-.++.+.++|..+.+.+.++.. + ......++|+ ++.++++..++.+.+.+..+
T Consensus 122 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~ 201 (351)
T 3f3f_A 122 HLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD 201 (351)
T ss_dssp GGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT
T ss_pred CCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC
Confidence 33444555789999999988877665542 1 1133445565 78888877777887777777
Q ss_pred CcEEEEEEeccCCeeeeeceeeEee-CC----EEEEEecCCCeEEEEeCCCCe
Q 019103 220 LKVIRKDIVRYKGREVRNLNELEFI-KG----EVWANVWQTDCIARISHEDGV 267 (346)
Q Consensus 220 ~kvi~~I~V~~~G~pv~~lNELE~~-~G----~LyaNv~~sn~I~vID~~TG~ 267 (346)
.+.........+..++ +.+.+. +| .+++..-.++.|.+.|..++.
T Consensus 202 ~~~~~~~~~~~h~~~i---~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~ 251 (351)
T 3f3f_A 202 GKLHVAAKLPGHKSLI---RSISWAPSIGRWYQLIATGCKDGRIRIFKITEKL 251 (351)
T ss_dssp SCEEEEEECCCCCSCE---EEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC
T ss_pred CceeeeeecCCCCcce---eEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCc
Confidence 7654333333222233 345555 34 777777778889999988763
No 232
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.40 E-value=6e-06 Score=88.98 Aligned_cols=179 Identities=11% Similarity=-0.005 Sum_probs=114.2
Q ss_pred cceeEEEe-cCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEeeCCEEE-EEECCCCc
Q 019103 106 FTQGLLYA-ENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTWLQKTGF-IYDQNNLN 181 (346)
Q Consensus 106 FTqGL~~~-~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw~~~~v~-V~D~~tl~ 181 (346)
....+.++ |||+ |..+. ...|..+|..+++.......+. .......+ +|+.|+.+.. ++.++ ++|.++.+
T Consensus 297 ~v~~~~~S~pdG~~la~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS----RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE----TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE----cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCC
Confidence 34789999 9985 44433 3489999999998654222222 22233334 4556666655 67899 99988776
Q ss_pred EEEEEecC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEec-----
Q 019103 182 KLEEFTHQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVW----- 253 (346)
Q Consensus 182 ~i~ti~~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~----- 253 (346)
...-.... ......++|||++|+.+...+.|+++|++++++.....-.. .++ ..+.+. || +|.....
T Consensus 371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~--~~v---~~~~~SpDG~~la~~~~~~~~~ 445 (1045)
T 1k32_A 371 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE--AMI---TDFTISDNSRFIAYGFPLKHGE 445 (1045)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--SCC---CCEEECTTSCEEEEEEEECSST
T ss_pred ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC--CCc---cceEECCCCCeEEEEecCcccc
Confidence 54322221 23456689999999887777899999999998765543322 121 234444 55 4433332
Q ss_pred ----CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 254 ----QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 254 ----~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
..+.|.++|.++|++ ..+. . .......++|+|++++||.+..
T Consensus 446 ~~~~~~~~i~l~d~~~g~~-~~l~--~-----------~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 446 TDGYVMQAIHVYDMEGRKI-FAAT--T-----------ENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TCSCCEEEEEEEETTTTEE-EECS--C-----------SSSBEEEEEECTTSCEEEEEES
T ss_pred ccCCCCCeEEEEECCCCcE-EEee--C-----------CCcccCCceEcCCCCEEEEEec
Confidence 235899999999983 2221 1 1224567999999999987764
No 233
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.39 E-value=2e-05 Score=81.16 Aligned_cols=196 Identities=14% Similarity=0.055 Sum_probs=111.9
Q ss_pred eeEEEecCCE-EEEEcCCCCCC--eEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee---------------C
Q 019103 108 QGLLYAENDT-LFESTGLYGRS--SVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL---------------Q 169 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg~s--~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~---------------~ 169 (346)
.++.++|||+ |..+....|.. .|+++|+++|+.+....-+....+...+++|+.||..... .
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 5789999994 43332222443 9999999999976643211112223345567888877644 3
Q ss_pred CEEEEEECCCCcEEEEE--ecC-CC---ceeEEeeCCCEEEE-EC-C---CCeEEEEeCCC------Cc-EEEEEEeccC
Q 019103 170 KTGFIYDQNNLNKLEEF--THQ-MK---DGWGLATDGKVLFG-SD-G---SSMLYQIDPQT------LK-VIRKDIVRYK 231 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~ti--~~~-~p---eGwGLt~Dg~~Lyv-Sd-G---s~~l~vIDp~T------~k-vi~~I~V~~~ 231 (346)
..++++|..+.+..... ..+ .+ .+..+++||++|++ ++ + .+.|+++|..+ .+ ...++....+
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 45999999887632222 111 11 25668999998876 33 3 57999999876 43 2444544332
Q ss_pred CeeeeeceeeEeeCCEEEEEecC---CCeEEEEeCCCCeE--EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEE
Q 019103 232 GREVRNLNELEFIKGEVWANVWQ---TDCIARISHEDGVV--LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFV 306 (346)
Q Consensus 232 G~pv~~lNELE~~~G~LyaNv~~---sn~I~vID~~TG~V--v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfV 306 (346)
+.. .-+...++++|+.... ...|.++|.++++. ...+ .+ . .....+.++++.++ +.+++
T Consensus 288 ~~~----~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-----~~---~---~~~~~~~~~~~~~~-~~lv~ 351 (710)
T 2xdw_A 288 GEY----DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL-----VP---E---HEKDVLEWVACVRS-NFLVL 351 (710)
T ss_dssp SCE----EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-----EC---C---CSSCEEEEEEEETT-TEEEE
T ss_pred cEE----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceec-----cC---C---CCCCeEEEEEEEcC-CEEEE
Confidence 221 1134456677754322 23699999998742 1111 10 0 11237888999854 45555
Q ss_pred ecCCC--CcEEEEEE
Q 019103 307 TGKLW--PKLYEINL 319 (346)
Q Consensus 307 TGK~W--p~l~ev~l 319 (346)
+...- ..|+.+.+
T Consensus 352 ~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 352 CYLHDVKNTLQLHDL 366 (710)
T ss_dssp EEEETTEEEEEEEET
T ss_pred EEEECCEEEEEEEEC
Confidence 54322 24555543
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.39 E-value=4.4e-06 Score=75.79 Aligned_cols=176 Identities=13% Similarity=0.093 Sum_probs=113.4
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEe
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFT 187 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~ 187 (346)
..+.++++|.||+++. + |..+|. +|+.+.....+.... ....+.++.||+.++ ++.++.+|++ ++.+.+++
T Consensus 63 ~~~~~~~~g~l~v~t~--~---l~~~d~-~g~~~~~~~~~~~~~-~~~~~~~~~l~v~t~-~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSD--K---VYAINP-DGTEKWRFDTKKAIV-SDFTIFEDILYVTSM-DGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp ECCEETTTTEECCSSC--E---EEEECC-CGGGGGGSCC------CCEEEETTEEEEECT-TSEEEEECTT-SCEEEEEE
T ss_pred cceEEecCCcEEEecC--c---EEEECC-CCcEEEEEECCCCcc-cCceEECCEEEEEec-CCEEEEEcCC-CCEEEEEc
Confidence 5677777889999875 3 999997 777654444443221 223445899999885 4789999998 88777776
Q ss_pred cCCCceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEe-eCCEEEEEecCCCeEEEEeCCC
Q 019103 188 HQMKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF-IKGEVWANVWQTDCIARISHED 265 (346)
Q Consensus 188 ~~~peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~-~~G~LyaNv~~sn~I~vID~~T 265 (346)
.+.+.-..+..| ++.+|+....+.|+.+|++ ++.+.+..... .. .+.+.. .+|.||+.. +.|.++| .+
T Consensus 134 ~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~--~~---~~~~~~d~~g~l~v~t---~~l~~~d-~~ 203 (330)
T 3hxj_A 134 TKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTND--AI---TSAASIGKDGTIYFGS---DKVYAIN-PD 203 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSS--CC---CSCCEECTTCCEEEES---SSEEEEC-TT
T ss_pred CCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCC--Cc---eeeeEEcCCCEEEEEe---CEEEEEC-CC
Confidence 542111122333 4558887767899999999 88777766532 11 223334 378999887 8899999 78
Q ss_pred CeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 266 GVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 266 G~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
|+.+-...... ...++++.++++ ++|++.. ...|+.+
T Consensus 204 g~~~~~~~~~~-------------~~~~~~~~~~~g-~l~v~t~-~~gl~~~ 240 (330)
T 3hxj_A 204 GTEKWNFYAGY-------------WTVTRPAISEDG-TIYVTSL-DGHLYAI 240 (330)
T ss_dssp SCEEEEECCSS-------------CCCSCCEECTTS-CEEEEET-TTEEEEE
T ss_pred CcEEEEEccCC-------------cceeceEECCCC-eEEEEcC-CCeEEEE
Confidence 88876664311 234567777664 4555532 3455554
No 235
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.38 E-value=1.6e-05 Score=76.43 Aligned_cols=193 Identities=10% Similarity=0.055 Sum_probs=126.5
Q ss_pred eeEEEecCCE-EEEEcCCCCCCeEEEEECCCCc----EEEEe-cc-CCCeeEEEEEEe--CCEEEEEEeeCCEEEEEECC
Q 019103 108 QGLLYAENDT-LFESTGLYGRSSVRRVALETGK----VEAIN-QM-EGSYFGEGLTLL--GEKLFQVTWLQKTGFIYDQN 178 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgk----v~~~~-~l-~~~~FgeGit~~--g~~LY~ltw~~~~v~V~D~~ 178 (346)
.+|.+++++. ++.+++ .+..|.+||+.+++ ..... .+ ....-...++.. ++.++++.-.++.+.++|..
T Consensus 185 ~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSAS--DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCEEECTTSTTEEEEEC--TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred EEEEeCCCCCCeEEEEe--CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 6999998886 777766 45699999999843 21111 11 111123445554 56677777889999999998
Q ss_pred CC---cEEEEEec-C-CCceeEEeeCCCEEEEE-CCCCeEEEEeCCCC-cEEEEEEeccCCeeeeeceeeEee-CC-EEE
Q 019103 179 NL---NKLEEFTH-Q-MKDGWGLATDGKVLFGS-DGSSMLYQIDPQTL-KVIRKDIVRYKGREVRNLNELEFI-KG-EVW 249 (346)
Q Consensus 179 tl---~~i~ti~~-~-~peGwGLt~Dg~~LyvS-dGs~~l~vIDp~T~-kvi~~I~V~~~G~pv~~lNELE~~-~G-~Ly 249 (346)
+. +.+.++.. . ......++++++.++++ ..++.|.++|..+. +.+.++.... .++ ..+.+. +| .++
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~--~~v---~~i~~sp~~~~~l 337 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK--DEI---FQVQWSPHNETIL 337 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS--SCE---EEEEECSSCTTEE
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC--CCE---EEEEECCCCCCEE
Confidence 87 56666643 2 23445577888876654 46889999999884 4455554322 222 345555 34 578
Q ss_pred EEecCCCeEEEEeCCCC--------------eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 250 ANVWQTDCIARISHEDG--------------VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG--------------~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
+..-..+.|.+.|..+. +++.... .....++.++|+|+++.+++++...+.|.
T Consensus 338 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------------~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG-------------GHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp EEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC-------------CCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred EEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC-------------CCCCCceEEEECCCCCCEEEEEECCCCEE
Confidence 77777889999998872 2222221 11345789999999997788887888766
Q ss_pred EEEEe
Q 019103 316 EINLR 320 (346)
Q Consensus 316 ev~l~ 320 (346)
--++.
T Consensus 405 iw~~~ 409 (430)
T 2xyi_A 405 VWQMA 409 (430)
T ss_dssp EEEEC
T ss_pred EeEcc
Confidence 66653
No 236
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.38 E-value=4.8e-06 Score=84.43 Aligned_cols=188 Identities=9% Similarity=-0.002 Sum_probs=113.9
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC----CeeEEEEEEeCCEEEEEEee--------CCEEEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGLTLLGEKLFQVTWL--------QKTGFIY 175 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~----~~FgeGit~~g~~LY~ltw~--------~~~v~V~ 175 (346)
..+.+++||+++.+ + .+..|.+||+++|+......-.. ......++++|++|...... .+.++++
T Consensus 20 ~~~~~spdg~~~~~-~--~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 20 PEAKWISDTEFIYR-E--QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCBSSSSCBCCC-C--SSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccEEcCCCcEEEE-e--CCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 47888999984433 4 34599999999998766654332 13444566678877766543 2789999
Q ss_pred ECCCCcEEEEEecC-C----CceeEEeeCCCEE-EEECCCCeEEEEeCCCCcEEEEEEeccCCe-----e--------ee
Q 019103 176 DQNNLNKLEEFTHQ-M----KDGWGLATDGKVL-FGSDGSSMLYQIDPQTLKVIRKDIVRYKGR-----E--------VR 236 (346)
Q Consensus 176 D~~tl~~i~ti~~~-~----peGwGLt~Dg~~L-yvSdGs~~l~vIDp~T~kvi~~I~V~~~G~-----p--------v~ 236 (346)
|.++.+. .++... . .....++|||++| |+++ ++|+++|.++.+.......+..+. + +.
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 9998876 444432 1 2335689999866 5566 689999999988764433322111 0 00
Q ss_pred eceeeEee-CC-EEEEEecCC---------------------------------CeEEEEeCCCCeEEEEEECCchhhhh
Q 019103 237 NLNELEFI-KG-EVWANVWQT---------------------------------DCIARISHEDGVVLGWVLLPNLRERL 281 (346)
Q Consensus 237 ~lNELE~~-~G-~LyaNv~~s---------------------------------n~I~vID~~TG~Vv~~I~l~~l~~~~ 281 (346)
....+.+- || +|+...... ..|.++|.+++++...+....-.
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~--- 250 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP--- 250 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG---
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC---
Confidence 11234443 45 444332211 26888888888864444321100
Q ss_pred hhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 282 VAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 282 ~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
. ........++|+||++.++++.
T Consensus 251 ~----~~~~~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 251 R----MREYYITMVKWATSTKVAVTWL 273 (723)
T ss_dssp G----GSSEEEEEEEESSSSEEEEEEE
T ss_pred C----CccceeEEEEEeCCCeEEEEEE
Confidence 0 0123567799999999886653
No 237
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.38 E-value=0.00029 Score=63.24 Aligned_cols=196 Identities=7% Similarity=-0.006 Sum_probs=125.2
Q ss_pred eeEEEEEEe-cCCCCcceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEE---EEeccC---CCeeEEEEEEeCCEEE
Q 019103 92 TIQVVNEFP-HDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVE---AINQME---GSYFGEGLTLLGEKLF 163 (346)
Q Consensus 92 t~~Vv~t~p-hd~~~FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~---~~~~l~---~~~FgeGit~~g~~LY 163 (346)
++++..++. | ......|+|+|+ +.++.|+| .+..|++||+.+++.. ....+. .......+..++..|
T Consensus 27 ~~~l~~tL~GH--~~~V~~v~~sp~~~~~l~S~s--~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l- 101 (340)
T 4aow_A 27 QMTLRGTLKGH--NGWVTQIATTPQFPDMILSAS--RDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA- 101 (340)
T ss_dssp EEEEEEEECCC--SSCEEEEEECTTCTTEEEEEE--TTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE-
T ss_pred ceEEEEEECCc--cCCEEEEEEeCCCCCEEEEEc--CCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE-
Confidence 566777775 5 344579999987 47888888 4569999999876521 111221 222232222234444
Q ss_pred EEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 164 QVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 164 ~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
++.-.++.+.++|............. .......+++++.|+....+..+.++|........ +....+... .+.+
T Consensus 102 ~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~-~~~~~~~~~---v~~~ 177 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDESHSEW---VSCV 177 (340)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-ECSSSCSSC---EEEE
T ss_pred EEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE-EEeccccCc---ccce
Confidence 44556789999999998888877653 22333456778888877778899999987655432 212111112 2233
Q ss_pred Eee---CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 242 EFI---KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 242 E~~---~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
.+. .+.+++..-....|.+.|..+++++..+.-. ....+.|+|+|+++.|++.+.
T Consensus 178 ~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h-------------~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 178 RFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGH-------------TGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCC-------------SSCEEEEEECTTSSEEEEEET
T ss_pred EEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCC-------------CCcEEEEEECCCCCEEEEEeC
Confidence 333 2356677767888999999999998877321 124688999999887666544
No 238
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.37 E-value=8.1e-05 Score=76.51 Aligned_cols=162 Identities=15% Similarity=0.097 Sum_probs=111.0
Q ss_pred eEEEecC-CEEEEEcCC-----------CC------C----CeEEEEECCCCcEEEEeccCCCe------eEEEEE----
Q 019103 109 GLLYAEN-DTLFESTGL-----------YG------R----SSVRRVALETGKVEAINQMEGSY------FGEGLT---- 156 (346)
Q Consensus 109 GL~~~~d-~~LyeStGl-----------yg------~----s~V~~iDl~Tgkv~~~~~l~~~~------FgeGit---- 156 (346)
..+++++ +.+|+++|. .| + +.|..+|++||+++=..++.+.. ..+.+.
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 4678754 589998862 12 1 68999999999998887653210 011121
Q ss_pred -EeCC--EEEEEEeeCCEEEEEECCCCcEEEEEecCC----------------------C--------------------
Q 019103 157 -LLGE--KLFQVTWLQKTGFIYDQNNLNKLEEFTHQM----------------------K-------------------- 191 (346)
Q Consensus 157 -~~g~--~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~----------------------p-------------------- 191 (346)
.+|+ .+++..-+++.++++|++|++++.+++... |
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 409 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL 409 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTT
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCc
Confidence 2343 345555678999999999999998877531 0
Q ss_pred -----ceeEEeeCCCEEEEE-C--------------------------------CCCeEEEEeCCCCcEEEEEEeccCCe
Q 019103 192 -----DGWGLATDGKVLFGS-D--------------------------------GSSMLYQIDPQTLKVIRKDIVRYKGR 233 (346)
Q Consensus 192 -----eGwGLt~Dg~~LyvS-d--------------------------------Gs~~l~vIDp~T~kvi~~I~V~~~G~ 233 (346)
.+.+++|+.+.+|+. + ..+.|+-||+.|++++=+.+.+.
T Consensus 410 Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~--- 486 (582)
T 1flg_A 410 GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL--- 486 (582)
T ss_dssp CSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS---
T ss_pred cccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC---
Confidence 022345566788873 1 24689999999999987777643
Q ss_pred eeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 234 EVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 234 pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
+.. -.-+...+|.||+.. .++.+..+|.+||+++-+..++
T Consensus 487 ~~~-~g~~~tagglvf~g~-~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 487 PLW-AGVLATAGNLVFTGT-GDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp CCC-SCCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred CCc-ccceEeCCCEEEEEC-CCCcEEEEECCCCCEEEEecCC
Confidence 211 012445688999865 4789999999999999999773
No 239
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.37 E-value=0.00013 Score=71.59 Aligned_cols=186 Identities=13% Similarity=0.079 Sum_probs=118.7
Q ss_pred CCEEEEEcCCCCCCeEEEEEC-CCCcEEEEeccC-CCeeEEEEEE-e-CCEEEEEEeeCCEEEEEECCCCcEEEEEecC-
Q 019103 115 NDTLFESTGLYGRSSVRRVAL-ETGKVEAINQME-GSYFGEGLTL-L-GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ- 189 (346)
Q Consensus 115 d~~LyeStGlyg~s~V~~iDl-~Tgkv~~~~~l~-~~~FgeGit~-~-g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~- 189 (346)
++++..+.+.--++.|+.|++ .+|+.+..+... +..-..-++. . ++.+++..-.++.|-+.|.+|++.++++..+
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 344444422213679999998 558887776542 2221233444 2 3567788888999999999999999999732
Q ss_pred ----CCceeEEeeCCCEEEE-----------EC-CCCeEEEEeCCCCcEEEEEEecc-CCeeeeeceeeEeeCCEEEEEe
Q 019103 190 ----MKDGWGLATDGKVLFG-----------SD-GSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFIKGEVWANV 252 (346)
Q Consensus 190 ----~peGwGLt~Dg~~Lyv-----------Sd-Gs~~l~vIDp~T~kvi~~I~V~~-~G~pv~~lNELE~~~G~LyaNv 252 (346)
.-...+++|||+.+.+ |- .+.+|.++|+.|.+.+....+.. +|+.-..+ +-.+ +|.+.|+-
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l-sg~~-sg~~lASg 301 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL-EGDV-KDHCAAAI 301 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE-EEEE-ETTEEEEE
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE-cccc-CCCEEEEE
Confidence 1112368899987754 21 26789999999999887665431 23211111 1111 24456666
Q ss_pred cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 253 WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 253 ~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
-.+++|-+-|.++|+++.++.- + ...+...+||+|+++.|+ +|-...+|+
T Consensus 302 S~DgTIkIWDl~tGk~l~tL~g---------H---~~~vvs~vafSPDG~~La-SGS~D~TIk 351 (356)
T 2w18_A 302 LTSGTIAIWDLLLGQCTALLPP---------V---SDQHWSFVKWSGTDSHLL-AGQKDGNIF 351 (356)
T ss_dssp ETTSCEEEEETTTCSEEEEECC---------C-----CCCCEEEECSSSSEEE-EECTTSCEE
T ss_pred cCCCcEEEEECCCCcEEEEecC---------C---CCCeEEEEEECCCCCEEE-EEECCCcEE
Confidence 6788999999999999999831 0 112344689999998766 555556554
No 240
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.37 E-value=0.00012 Score=75.93 Aligned_cols=162 Identities=12% Similarity=0.058 Sum_probs=111.4
Q ss_pred eEEEec-CCEEEEEcCCCC-------------CCeEEEEECCCCcEEEEeccCCC----------eeEEEEE-EeCC--E
Q 019103 109 GLLYAE-NDTLFESTGLYG-------------RSSVRRVALETGKVEAINQMEGS----------YFGEGLT-LLGE--K 161 (346)
Q Consensus 109 GL~~~~-d~~LyeStGlyg-------------~s~V~~iDl~Tgkv~~~~~l~~~----------~FgeGit-~~g~--~ 161 (346)
...+++ ++.+|+++|.-. .++|..+|++||+++=.....+. +--..+. .+|+ .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 456764 468999987310 25899999999999877765432 1111111 1243 5
Q ss_pred EEEEEeeCCEEEEEECCCCcEEEEEecCC----------C-------------------------------ceeEEeeCC
Q 019103 162 LFQVTWLQKTGFIYDQNNLNKLEEFTHQM----------K-------------------------------DGWGLATDG 200 (346)
Q Consensus 162 LY~ltw~~~~v~V~D~~tl~~i~ti~~~~----------p-------------------------------eGwGLt~Dg 200 (346)
+++..-+++.++++|++|++++.+++... + .+.+++|+.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCC
Confidence 55556678999999999999998876420 0 234567777
Q ss_pred CEEEEEC---------------------------------------CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceee
Q 019103 201 KVLFGSD---------------------------------------GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 201 ~~LyvSd---------------------------------------Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNEL 241 (346)
+.+|+.. ....|+-||+.|++++=+.+.+. |.. -.-+
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~---~~~-~g~~ 480 (599)
T 1w6s_A 405 ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF---AVW-GGTM 480 (599)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS---CCC-SBCE
T ss_pred CEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC---Ccc-Ccce
Confidence 8887731 23589999999999987777643 110 0114
Q ss_pred EeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 242 EFIKGEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 242 E~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
...+|.||+.. .++.+..+|.+||+++-+..++
T Consensus 481 ~tagg~vf~gt-~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 481 ATAGDLVFYGT-LDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp EETTTEEEEEC-TTSEEEEEETTTCCEEEEEECS
T ss_pred EecCCEEEEEC-CCCeEEEEECCCCCEEEEeeCC
Confidence 45688999864 4789999999999999999773
No 241
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.37 E-value=3.2e-05 Score=77.01 Aligned_cols=190 Identities=9% Similarity=-0.044 Sum_probs=108.8
Q ss_pred cceeEEEecCCEEEEEcCCCCC--CeEEEEEC--CCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCc
Q 019103 106 FTQGLLYAENDTLFESTGLYGR--SSVRRVAL--ETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~--s~V~~iDl--~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
....+.++||..+|.+....|. ..|..+|+ +.+.. .+......-...++++++.++.+....+...++|.++.+
T Consensus 66 ~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~ 143 (582)
T 3o4h_A 66 SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG 143 (582)
T ss_dssp EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE
T ss_pred ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc--cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc
Confidence 3467788888345555321133 36666777 44433 333222332446788887766666566666699998887
Q ss_pred EEEEEecCCCceeEEeeCCCEEEE-EC-C--CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CC-EEEEEecCC
Q 019103 182 KLEEFTHQMKDGWGLATDGKVLFG-SD-G--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KG-EVWANVWQT 255 (346)
Q Consensus 182 ~i~ti~~~~peGwGLt~Dg~~Lyv-Sd-G--s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G-~LyaNv~~s 255 (346)
...-...+. ....++|||++|+. ++ + ...|+++|+++.+.. ++. +..+. .+.+.+. || .|+.+ ...
T Consensus 144 ~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~-~~~~~----~~~~~~SpDG~~l~~~-~~~ 215 (582)
T 3o4h_A 144 LRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD-SGEGS----FSSASISPGMKVTAGL-ETA 215 (582)
T ss_dssp EEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC-CSSCE----EEEEEECTTSCEEEEE-ECS
T ss_pred EEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee-cCCCc----cccceECCCCCEEEEc-cCC
Confidence 655444432 55668899999874 43 2 267999999988865 332 22121 2345454 56 46633 334
Q ss_pred C--eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 256 D--CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 256 n--~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
+ .|.++|.++|+.. .+. +....... +....+...+|+||+ .+++++....
T Consensus 216 ~~~~i~~~d~~~~~~~-~~~--~~~~~~~~---~~~~~~~~~~~spdg-~~~~~~~~~g 267 (582)
T 3o4h_A 216 REARLVTVDPRDGSVE-DLE--LPSKDFSS---YRPTAITWLGYLPDG-RLAVVARREG 267 (582)
T ss_dssp SCEEEEEECTTTCCEE-ECC--CSCSHHHH---HCCSEEEEEEECTTS-CEEEEEEETT
T ss_pred CeeEEEEEcCCCCcEE-Ecc--CCCcChhh---hhhccccceeEcCCC-cEEEEEEcCC
Confidence 4 7999999999987 331 21111000 011123445599999 5555443333
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.37 E-value=5.4e-05 Score=79.09 Aligned_cols=161 Identities=16% Similarity=0.101 Sum_probs=109.9
Q ss_pred eEEEecC-CEEEEEcCCC------------CC----CeEEEEECCCCcEEEEeccCCC----------eeEEEEEEeCC-
Q 019103 109 GLLYAEN-DTLFESTGLY------------GR----SSVRRVALETGKVEAINQMEGS----------YFGEGLTLLGE- 160 (346)
Q Consensus 109 GL~~~~d-~~LyeStGly------------g~----s~V~~iDl~Tgkv~~~~~l~~~----------~FgeGit~~g~- 160 (346)
.+.++++ +.+|++++.- |+ +.|..+|++||+++=.....+. +--..+...|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5778864 5899988620 11 2599999999999877754321 11112223332
Q ss_pred -EEEEEEeeCCEEEEEECCCCcEEEEEecCC------------------------C-----------------ceeEEee
Q 019103 161 -KLFQVTWLQKTGFIYDQNNLNKLEEFTHQM------------------------K-----------------DGWGLAT 198 (346)
Q Consensus 161 -~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~------------------------p-----------------eGwGLt~ 198 (346)
.+++..-+++.++++|++|++++.++++.. + .+.++++
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 244444578999999999999997655420 0 1145777
Q ss_pred CCCEEEEE-C------------------------C--------------------CCeEEEEeCCCCcEEEEEEeccCCe
Q 019103 199 DGKVLFGS-D------------------------G--------------------SSMLYQIDPQTLKVIRKDIVRYKGR 233 (346)
Q Consensus 199 Dg~~LyvS-d------------------------G--------------------s~~l~vIDp~T~kvi~~I~V~~~G~ 233 (346)
+.+.+|+. + | ++.|+.||++|++++=+++.+..
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-- 476 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-- 476 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS--
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC--
Confidence 88999984 1 0 26799999999999988877542
Q ss_pred eeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEEC
Q 019103 234 EVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 234 pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
... --+...+|.||+.. .++.|..+|.+||+++-++.+
T Consensus 477 -~~~-g~~~tagglvf~gt-~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 477 -FNG-GTLSTAGNLVFEGS-ADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp -CCC-CEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEEC
T ss_pred -ccC-ccceECCCEEEEEC-CCCcEEEEECCCCccceeeeC
Confidence 100 12445678999875 578999999999999999977
No 243
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.36 E-value=4.7e-05 Score=77.75 Aligned_cols=207 Identities=10% Similarity=0.049 Sum_probs=130.6
Q ss_pred EEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc--CCCeeEEEEEEeCC---EEEEEEee
Q 019103 95 VVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM--EGSYFGEGLTLLGE---KLFQVTWL 168 (346)
Q Consensus 95 Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l--~~~~FgeGit~~g~---~LY~ltw~ 168 (346)
.+.++. |.. -...+.|++++..+.|++ .+..|++||............ +....-..+....+ .+.++.-.
T Consensus 464 ~~~~~~~h~~--~v~~~~~s~~~~~l~s~s--~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 464 STRRFVGHTK--DVLSVAFSLDNRQIVSAS--RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp EEEEEECCSS--CEEEEEECTTSSCEEEEE--TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred ceeEEeCCCC--CEEEEEEeCCCCEEEEEe--CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence 344553 432 347899999998777877 566999999876644332221 11222334444332 34555566
Q ss_pred CCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C
Q 019103 169 QKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K 245 (346)
Q Consensus 169 ~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~ 245 (346)
++.+.++|..+.+.+.++... .-....+++||+.|.....++.|.++|..+.+.+.++... .+ ++.+.+. +
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~---~~---v~~~~~sp~ 613 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN---SV---IHALCFSPN 613 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS---SC---EEEEEECSS
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC---Cc---EEEEEEcCC
Confidence 899999999999998888632 1234567889998888777889999999999876554332 12 3345555 4
Q ss_pred CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhc---c----CCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 246 GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAA---G----YNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 246 G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~---~----~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
+++.+.. ..+.|.+.|.++++++..+... +....... + .......+.++|+|+++.|+..+ ....|
T Consensus 614 ~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs-~Dg~i 686 (694)
T 3dm0_A 614 RYWLCAA-TEHGIKIWDLESKSIVEDLKVD-LKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY-TDGVI 686 (694)
T ss_dssp SSEEEEE-ETTEEEEEETTTTEEEEEECCC-CC----------------CCCCEEEEEECTTSSEEEEEE-TTSEE
T ss_pred CcEEEEE-cCCCEEEEECCCCCChhhhccc-cccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc-CCCeE
Confidence 5544443 3677999999999999988652 21110000 0 00111246899999998776554 44443
No 244
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.35 E-value=1.8e-05 Score=78.90 Aligned_cols=173 Identities=13% Similarity=0.139 Sum_probs=108.9
Q ss_pred eEEEecCC--EEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeC---CEEEEEECCCCcEE
Q 019103 109 GLLYAEND--TLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ---KTGFIYDQNNLNKL 183 (346)
Q Consensus 109 GL~~~~d~--~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~---~~v~V~D~~tl~~i 183 (346)
...+++|+ .+|.+.. .+.+.+||+++|+.......+. +.-.++++|+.|+...... ..++++|.++.+..
T Consensus 114 ~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 45666666 4565543 2355589999998765554443 4455788999988665541 56999999888765
Q ss_pred EEEecC--CCceeEEeeCCCEEEEECCCC--eEEEEeCCCCcEEEEEEeccCCeeeeeceeeE--------ee-CCEEEE
Q 019103 184 EEFTHQ--MKDGWGLATDGKVLFGSDGSS--MLYQIDPQTLKVIRKDIVRYKGREVRNLNELE--------FI-KGEVWA 250 (346)
Q Consensus 184 ~ti~~~--~peGwGLt~Dg~~LyvSdGs~--~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE--------~~-~G~Lya 250 (346)
++... ......++|||++|+.++.++ +|+++|+++.+.. .+......+. .+. +. ||++|+
T Consensus 189 -~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~spdg~~~~ 261 (582)
T 3o4h_A 189 -VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE---DLELPSKDFS---SYRPTAITWLGYLPDGRLAV 261 (582)
T ss_dssp -EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE---ECCCSCSHHH---HHCCSEEEEEEECTTSCEEE
T ss_pred -EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE---EccCCCcChh---hhhhccccceeEcCCCcEEE
Confidence 44321 123456889999999877555 9999999998876 2222111111 122 33 678887
Q ss_pred EecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCc
Q 019103 251 NVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPK 313 (346)
Q Consensus 251 Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~ 313 (346)
.....+.+.+.+. |+++. . +. ....+++++ +++.+ +++.....
T Consensus 262 ~~~~~g~~~l~~~--g~~~~---~------------~~-~~v~~~~~s-dg~~l-~~~s~~~~ 304 (582)
T 3o4h_A 262 VARREGRSAVFID--GERVE---A------------PQ-GNHGRVVLW-RGKLV-TSHTSLST 304 (582)
T ss_dssp EEEETTEEEEEET--TEEEC---C------------CS-SEEEEEEEE-TTEEE-EEEEETTE
T ss_pred EEEcCCcEEEEEE--CCeec---c------------CC-CceEEEEec-CCEEE-EEEcCCCC
Confidence 7766778877777 77544 1 01 134678999 66554 44444433
No 245
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.34 E-value=0.00031 Score=65.01 Aligned_cols=204 Identities=9% Similarity=0.002 Sum_probs=121.5
Q ss_pred eeEEEEEEecCCCCcceeEEE-----ec-CCEEEEEcCCCCCCeEEEEECCCCc-------EEEEeccCCCeeEEEEEEe
Q 019103 92 TIQVVNEFPHDPRAFTQGLLY-----AE-NDTLFESTGLYGRSSVRRVALETGK-------VEAINQMEGSYFGEGLTLL 158 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~-----~~-d~~LyeStGlyg~s~V~~iDl~Tgk-------v~~~~~l~~~~FgeGit~~ 158 (346)
.++...++.- .......+.+ .+ |+.++.+++ .+..|++||+.+++ ....+. +....-..++..
T Consensus 10 ~~~~~~~l~g-H~~~V~~~~~~~s~~~~~d~~~l~sgs--~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~ 85 (343)
T 2xzm_R 10 QVVKRGILEG-HSDWVTSIVAGFSQKENEDSPVLISGS--RDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALS 85 (343)
T ss_dssp EEEEEEEEEC-CSSCEEEEEECCCSSTTCCCCEEEEEE--TTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEEC
T ss_pred Eeeeeeeecc-chhhhhheeeEEEeecCCCCCEEEEEc--CCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEEC
Confidence 3455555652 2344578888 55 778888877 55699999998653 222221 111112334443
Q ss_pred C-CEEEEEEeeCCEEEEEECCCCcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEec-cCCee
Q 019103 159 G-EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR-YKGRE 234 (346)
Q Consensus 159 g-~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~-~~G~p 234 (346)
. +.+.++.-.++.+.++|.++.+.+.++... .-....++||++.|+.+..+++|.++|....... ..... .+..+
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~~~~~~~ 164 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKF-SSAEKENHSDW 164 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEE-ECCTTTSCSSC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCcee-eeecccCCCce
Confidence 2 334445567899999999999999988642 1234557889999988777899999998743221 11110 11111
Q ss_pred eeeceeeEeeC-----------CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCE
Q 019103 235 VRNLNELEFIK-----------GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNR 303 (346)
Q Consensus 235 v~~lNELE~~~-----------G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 303 (346)
++.+.+.. +..++..-.+..|.+.| .+++....+.-. ....+.++|+|+++.
T Consensus 165 ---v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h-------------~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 165 ---VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAH-------------ESNVNHLSISPNGKY 227 (343)
T ss_dssp ---EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECC-------------SSCEEEEEECTTSSE
T ss_pred ---eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCc-------------cccceEEEECCCCCE
Confidence 22233321 24555555678888999 456655555221 124678999999887
Q ss_pred EEEecCCCCcEEEEE
Q 019103 304 IFVTGKLWPKLYEIN 318 (346)
Q Consensus 304 LfVTGK~Wp~l~ev~ 318 (346)
|...+ ...+|+--.
T Consensus 228 l~sgs-~dg~v~iwd 241 (343)
T 2xzm_R 228 IATGG-KDKKLLIWD 241 (343)
T ss_dssp EEEEE-TTCEEEEEE
T ss_pred EEEEc-CCCeEEEEE
Confidence 65544 445444333
No 246
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.34 E-value=1.8e-05 Score=79.74 Aligned_cols=197 Identities=11% Similarity=0.044 Sum_probs=113.0
Q ss_pred eeEEEecCCE-EEEEcCC-------CCCCeEEEEECCC------CcEEEEe-ccCCCeeEEEEEEeCCEEEEEEeeC---
Q 019103 108 QGLLYAENDT-LFESTGL-------YGRSSVRRVALET------GKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQ--- 169 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGl-------yg~s~V~~iDl~T------gkv~~~~-~l~~~~FgeGit~~g~~LY~ltw~~--- 169 (346)
.++.++|||+ |+.++.. .+...|.++|+++ ++..... .-......-.++++|++|+.+.|..
T Consensus 133 ~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~ 212 (662)
T 3azo_A 133 ADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCC
T ss_pred cCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCC
Confidence 5789999984 5544321 2336899999999 7654322 1122222334566788898877654
Q ss_pred ----CEEEEEECC-CC--cEEEEEecC---CCceeEEeeCCCEEEEECCCC--eEEEEeCCCCcEEEEEEecc-CCeeee
Q 019103 170 ----KTGFIYDQN-NL--NKLEEFTHQ---MKDGWGLATDGKVLFGSDGSS--MLYQIDPQTLKVIRKDIVRY-KGREVR 236 (346)
Q Consensus 170 ----~~v~V~D~~-tl--~~i~ti~~~---~peGwGLt~Dg~~LyvSdGs~--~l~vIDp~T~kvi~~I~V~~-~G~pv~ 236 (346)
..++++|.+ ++ ....++..+ .......++||+.+|+++.++ +|+.+|+++.+....+.... .+.|..
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccc
Confidence 689999998 56 233344321 223345789999777787544 99999998877543222111 011111
Q ss_pred e--ceeeEee-CCEEEE-EecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCC
Q 019103 237 N--LNELEFI-KGEVWA-NVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWP 312 (346)
Q Consensus 237 ~--lNELE~~-~G~Lya-Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp 312 (346)
. ...+.+. +|++++ .......|.++|.+++++ ..+... .....+++ ++++++++++.....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-------------~~~~~~~~-s~~~~~~~~~~~~~~ 357 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGEL-VDAAGP-------------WTEWAATL-TVSGTRAVGVAASPR 357 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEE-EECCSS-------------CCEEEEEE-EEETTEEEEEEEETT
T ss_pred cccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcE-EEecCC-------------CCeEEEEE-ecCCCEEEEEEcCCC
Confidence 1 1234444 566554 333456799999999984 444221 11334551 344566665544443
Q ss_pred ---cEEEEEE
Q 019103 313 ---KLYEINL 319 (346)
Q Consensus 313 ---~l~ev~l 319 (346)
.+|.+.+
T Consensus 358 ~~~~i~~~d~ 367 (662)
T 3azo_A 358 TAYEVVELDT 367 (662)
T ss_dssp EEEEEEEEET
T ss_pred CCCEEEEEEC
Confidence 6776653
No 247
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.34 E-value=5.4e-05 Score=81.55 Aligned_cols=193 Identities=12% Similarity=-0.001 Sum_probs=112.4
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-CCeeEEEEEEeCCEEEEEEeeC---------CEEEEE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-GSYFGEGLTLLGEKLFQVTWLQ---------KTGFIY 175 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~~---------~~v~V~ 175 (346)
....+.++|||+.+.+.. .+..|.+||+++|++.....-. .......++++|+.|....... +.++++
T Consensus 380 ~~~~~~~SpDG~~la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp SEEEEEECTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred ceeeeEECCCCCEEEEEC--CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 346899999996444444 3459999999999987766332 2233444566777776665433 689999
Q ss_pred ECCCCcEEEEEec-C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcE-------EEEEE-------------------
Q 019103 176 DQNNLNKLEEFTH-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV-------IRKDI------------------- 227 (346)
Q Consensus 176 D~~tl~~i~ti~~-~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kv-------i~~I~------------------- 227 (346)
|.++.+ +.++.. . ......+++||++||.+...+.....|..+..+ .-.+.
T Consensus 458 d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1045)
T 1k32_A 458 DMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 536 (1045)
T ss_dssp ETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCC
T ss_pred ECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccc
Confidence 999887 444432 2 123345789999987743222111222211111 00000
Q ss_pred ---eccCCe-----ee----eeceeeEee-CCEEEEE-------------ecCCCeEEEEeCCCCeEEEEEECCchhhhh
Q 019103 228 ---VRYKGR-----EV----RNLNELEFI-KGEVWAN-------------VWQTDCIARISHEDGVVLGWVLLPNLRERL 281 (346)
Q Consensus 228 ---V~~~G~-----pv----~~lNELE~~-~G~LyaN-------------v~~sn~I~vID~~TG~Vv~~I~l~~l~~~~ 281 (346)
+..+|. ++ ...+.+.+. ||++|+. .-....|.++|.++++.....
T Consensus 537 ~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~--------- 607 (1045)
T 1k32_A 537 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--------- 607 (1045)
T ss_dssp CCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---------
T ss_pred cccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee---------
Confidence 000110 00 112233333 5666653 112447999999999864322
Q ss_pred hhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 282 VAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 282 ~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
....+++++|||++|++++.. .++.+.+.
T Consensus 608 --------~~v~~~~~S~DG~~l~~~~~~--~i~~~d~~ 636 (1045)
T 1k32_A 608 --------NNLTDLRLSADRKTVMVRKDD--GKIYTFPL 636 (1045)
T ss_dssp --------EEEEEEEECTTSCEEEEEETT--SCEEEEES
T ss_pred --------cCcceEEECCCCCEEEEEcCC--cEEEEeCc
Confidence 134678999999999999765 67777764
No 248
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.33 E-value=6.1e-06 Score=84.09 Aligned_cols=110 Identities=14% Similarity=0.060 Sum_probs=77.2
Q ss_pred eEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC----CeeEEEEEEeCCEEEEEEee--------CCEEEEEE
Q 019103 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG----SYFGEGLTLLGEKLFQVTWL--------QKTGFIYD 176 (346)
Q Consensus 109 GL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~----~~FgeGit~~g~~LY~ltw~--------~~~v~V~D 176 (346)
++.+++||+++.++. +..|.+||+++|+......-.. ....-.++++|++|..+... ++.++++|
T Consensus 20 ~~~~s~dg~~~~~~~---d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQSA---DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEECT---TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEEcC---CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 778899997555543 4599999999999765553221 13445567788888766542 47899999
Q ss_pred CCCCcEE--EEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEE
Q 019103 177 QNNLNKL--EEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVI 223 (346)
Q Consensus 177 ~~tl~~i--~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi 223 (346)
.++.+.+ .++... .....++|||++|..+. +++|+++|..+.+..
T Consensus 97 ~~~g~~~~~~~l~~~-~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 97 LSNGEFVRGNELPRP-IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPF 143 (719)
T ss_dssp TTTTEECCSSCCCSS-BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred CCCCccccceecCcc-cccceECCCCCEEEEEE-CCeEEEEeCCCCCcE
Confidence 9998774 233222 35567899998765532 469999999988764
No 249
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.33 E-value=2.3e-05 Score=72.59 Aligned_cols=170 Identities=9% Similarity=-0.007 Sum_probs=106.0
Q ss_pred EEEEEEecCCCCcceeEEEec--CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeC-CEEEEEEeeCC
Q 019103 94 QVVNEFPHDPRAFTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLG-EKLFQVTWLQK 170 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g-~~LY~ltw~~~ 170 (346)
++++.+.+....-...+.+++ ++.++.+.+ .+..|++||+.+++............-..++... +.++++--.++
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg 192 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG 192 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC
Confidence 345555544344457899999 888888877 4569999999999986655332221122344443 33444446789
Q ss_pred EEEEEECCCCcEE-EEEec--C-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEecc-CCeeeeeceeeEee-
Q 019103 171 TGFIYDQNNLNKL-EEFTH--Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGREVRNLNELEFI- 244 (346)
Q Consensus 171 ~v~V~D~~tl~~i-~ti~~--~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~-~G~pv~~lNELE~~- 244 (346)
.+.++|..+.+.+ .++.. . .-....+++||++|..+. ++.|.++|..+.+.+.++..-. +..++.. ..+.+.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 270 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT-VTYDIDD 270 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CC-EEEEECT
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccc-eEEEECC
Confidence 9999999999988 77765 2 123445788999998865 3499999999987765444311 1111111 125555
Q ss_pred CCEEEEE-ecCCCeEEEEeCCCCe
Q 019103 245 KGEVWAN-VWQTDCIARISHEDGV 267 (346)
Q Consensus 245 ~G~LyaN-v~~sn~I~vID~~TG~ 267 (346)
+|+..+. ...++.|.+.|.+++.
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCEEEEecCCCCcEEEEEEcccc
Confidence 4544444 3337788888876543
No 250
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.30 E-value=5.3e-05 Score=71.29 Aligned_cols=202 Identities=9% Similarity=0.029 Sum_probs=120.4
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc-----------EEEEeccC-------------CCeeEEEEEEeCC-
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGK-----------VEAINQME-------------GSYFGEGLTLLGE- 160 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk-----------v~~~~~l~-------------~~~FgeGit~~g~- 160 (346)
....+.|+++|.++.+.+ .+..|++||+.+++ +...+.-. ...........++
T Consensus 30 ~V~~v~~s~~g~~la~g~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGD--KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp SEEEEEECSSSSEEEEEE--TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred cEEEEEECCCCCEEEEEc--CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 347899999998777777 45699999999887 34443321 2222222222331
Q ss_pred EEEEEEeeCCEEEEEECCCCcEEE---------------------------------------EEe--cC-CCceeEEee
Q 019103 161 KLFQVTWLQKTGFIYDQNNLNKLE---------------------------------------EFT--HQ-MKDGWGLAT 198 (346)
Q Consensus 161 ~LY~ltw~~~~v~V~D~~tl~~i~---------------------------------------ti~--~~-~peGwGLt~ 198 (346)
..+++.-.++.+.++|..+.+... .+. +. .-....+++
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 344455668999999987644321 221 11 123456788
Q ss_pred CCCEEEEECCCCeEEEEeCCC-CcEEEEEEec-----cCCeeeeeceeeEee-CC-EEEEEecCCCeEEEEeCCCCeE--
Q 019103 199 DGKVLFGSDGSSMLYQIDPQT-LKVIRKDIVR-----YKGREVRNLNELEFI-KG-EVWANVWQTDCIARISHEDGVV-- 268 (346)
Q Consensus 199 Dg~~LyvSdGs~~l~vIDp~T-~kvi~~I~V~-----~~G~pv~~lNELE~~-~G-~LyaNv~~sn~I~vID~~TG~V-- 268 (346)
|++.|..+ .++.|.++|.++ .+....+.+. .+.. .++.+.+. +| .+++..-.++.|.+.|..+++.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTE---VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCC---CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCc---ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999888 688999999984 4444444221 1112 23456665 44 5666666688999999999986
Q ss_pred --EEEEECCchhh---hhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEE
Q 019103 269 --LGWVLLPNLRE---RLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 269 --v~~I~l~~l~~---~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l 319 (346)
+..+....-.. .... .....+.++|+|+++.|...+. ..|.--++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~ 313 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSE----IISSISDVKFSHSGRYMMTRDY--LSVKVWDL 313 (447)
T ss_dssp TTCEEECCC-----CCHHHH----HTTCEEEEEECTTSSEEEEEES--SEEEEEET
T ss_pred ceeeEeccCCCccccccccc----cCceEEEEEECCCCCEEEEeeC--CeEEEEeC
Confidence 45553311000 0000 0015688999999988776665 66655544
No 251
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.30 E-value=1.3e-05 Score=74.10 Aligned_cols=191 Identities=12% Similarity=0.068 Sum_probs=111.4
Q ss_pred eeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEE
Q 019103 108 QGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEE 185 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~t 185 (346)
..+.++|||+ |+.+....|...|.++|+++|+......-... .++.-.+++|+.|+.+... +.++++|.++.+....
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLEEQVI 117 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCCEEEE
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCCcEEE
Confidence 5778999994 44343333667899999999986543322222 1222346678888666543 4899999998876555
Q ss_pred EecCCCceeE-----------------------EeeCCCEEEEE-----CCCCeEEEEeCCCCcEEEEEEeccCCeeeee
Q 019103 186 FTHQMKDGWG-----------------------LATDGKVLFGS-----DGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (346)
Q Consensus 186 i~~~~peGwG-----------------------Lt~Dg~~LyvS-----dGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~ 237 (346)
...+ .+|. ++||++.+++. ++...|+++|+++.+......- . . .
T Consensus 118 ~~~~--~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~-~--~---~ 189 (396)
T 3c5m_A 118 YTVD--EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD-T--A---W 189 (396)
T ss_dssp EECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE-S--S---C
T ss_pred Eecc--cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC-C--c---c
Confidence 4432 3332 24556655443 4567999999999876543321 1 1 1
Q ss_pred ceeeEee--CC-EE-EEEecCC----CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec-
Q 019103 238 LNELEFI--KG-EV-WANVWQT----DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG- 308 (346)
Q Consensus 238 lNELE~~--~G-~L-yaNv~~s----n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG- 308 (346)
...+.+. +| +| |+..-.. ..|.++|.+++++.... . . ......+.++|+|++++|+.+.
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~-~--------~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK---E-H--------AEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS---C-C--------CTTEEEEEEEECTTSSCEEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee---c-c--------CCCccccceEECCCCCEEEEEec
Confidence 2234443 34 34 4443222 47999999887642211 1 0 0123467799999999766552
Q ss_pred C-CCCc--EEEEEE
Q 019103 309 K-LWPK--LYEINL 319 (346)
Q Consensus 309 K-~Wp~--l~ev~l 319 (346)
. ..+. ||.+.+
T Consensus 258 ~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 258 FKGQTDRVIYKANP 271 (396)
T ss_dssp ETTTCCEEEEEECT
T ss_pred CCCCccceEEEEEC
Confidence 2 2334 776654
No 252
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.29 E-value=1.3e-06 Score=88.96 Aligned_cols=205 Identities=10% Similarity=0.041 Sum_probs=115.1
Q ss_pred eeEEEecCCE-EEEEcCC------CCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCC
Q 019103 108 QGLLYAENDT-LFESTGL------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGl------yg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl 180 (346)
..+.++|||+ |..++.. .++..|.++|+++|+.+....+.........+++|++|..+ .++.++++|..+.
T Consensus 63 ~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g 140 (719)
T 1z68_A 63 SNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYV--YQNNIYLKQRPGD 140 (719)
T ss_dssp SEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEE--ETTEEEEESSTTS
T ss_pred eeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEE--ECCeEEEEeCCCC
Confidence 5889999995 4333221 01469999999999874333444444445567788776655 3789999999888
Q ss_pred cEEEEEecCCC--------------------ceeEEeeCCCEEEE-E-CCC-----------------------------
Q 019103 181 NKLEEFTHQMK--------------------DGWGLATDGKVLFG-S-DGS----------------------------- 209 (346)
Q Consensus 181 ~~i~ti~~~~p--------------------eGwGLt~Dg~~Lyv-S-dGs----------------------------- 209 (346)
+...-...+.. .+...+|||++|+. + |.+
T Consensus 141 ~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~ 220 (719)
T 1z68_A 141 PPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAK 220 (719)
T ss_dssp CCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSC
T ss_pred CcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCC
Confidence 76432211111 25778999998865 4 322
Q ss_pred ---CeEEEEeCCCCcEEEEEEeccC----CeeeeeceeeEee-CCEEEEEec--CC--CeEEEEe----CCCCeEEEEEE
Q 019103 210 ---SMLYQIDPQTLKVIRKDIVRYK----GREVRNLNELEFI-KGEVWANVW--QT--DCIARIS----HEDGVVLGWVL 273 (346)
Q Consensus 210 ---~~l~vIDp~T~kvi~~I~V~~~----G~pv~~lNELE~~-~G~LyaNv~--~s--n~I~vID----~~TG~Vv~~I~ 273 (346)
.+|+++|.++.+.+..+.+... +.. ..+..+.+. ||++++... .. ..|.++| +++|++...+.
T Consensus 221 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~ 299 (719)
T 1z68_A 221 NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD-YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE 299 (719)
T ss_dssp CCEEEEEEEESSCHHHHCCEECCCCHHHHTSC-EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE
T ss_pred CCeeEEEEEECCCCCccceeEccCCccCCCCc-ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEe
Confidence 1788999988775322333210 111 112234443 577665422 12 2488899 88887532221
Q ss_pred CCchhhhhhhccCCCCceeeEEEEeCCCCEEEE-ec--CCCCcEEEEEE
Q 019103 274 LPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFV-TG--KLWPKLYEINL 319 (346)
Q Consensus 274 l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfV-TG--K~Wp~l~ev~l 319 (346)
. .... ..+.-.......++|+|+++.+++ +. ..+..||.+.+
T Consensus 300 ~--~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 300 H--IEES--RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp E--EEEC--SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred c--cccc--CCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence 0 0000 000000001126789999998766 33 23456666544
No 253
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.28 E-value=0.00015 Score=71.69 Aligned_cols=193 Identities=11% Similarity=0.092 Sum_probs=127.7
Q ss_pred ceeEEEecCCEEEEE-cCC------------CCCCeEEEEECCCC--cEEEEeccCC-----CeeEEEEEEe--------
Q 019103 107 TQGLLYAENDTLFES-TGL------------YGRSSVRRVALETG--KVEAINQMEG-----SYFGEGLTLL-------- 158 (346)
Q Consensus 107 TqGL~~~~d~~LyeS-tGl------------yg~s~V~~iDl~Tg--kv~~~~~l~~-----~~FgeGit~~-------- 158 (346)
.+++.+++.++||+= +|. .+.-+|..||+.|+ ++++++.+++ .-|-..+.++
T Consensus 89 V~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c 168 (381)
T 3q6k_A 89 IYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDC 168 (381)
T ss_dssp EEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTS
T ss_pred eeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCC
Confidence 368888888898864 452 34568999999999 9999998873 2344567777
Q ss_pred -CCEEEEEEeeCCEEEEEECCCCcEEEEEe------------c-------C-CCceeEEeeC----CCEEEEEC-CCCeE
Q 019103 159 -GEKLFQVTWLQKTGFIYDQNNLNKLEEFT------------H-------Q-MKDGWGLATD----GKVLFGSD-GSSML 212 (346)
Q Consensus 159 -g~~LY~ltw~~~~v~V~D~~tl~~i~ti~------------~-------~-~peGwGLt~D----g~~LyvSd-Gs~~l 212 (346)
+..+|+++-...-+.|||.++.+--+-.. + . .-.|.+|++| +++||-+- .+..+
T Consensus 169 ~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~l 248 (381)
T 3q6k_A 169 SETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKV 248 (381)
T ss_dssp CSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEE
T ss_pred CccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcE
Confidence 46799999888999999988765433221 0 0 1356778888 88999976 57789
Q ss_pred EEEeCCCC---cEEEEE-EeccCCeeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCC----eEEEEEECCchhhhhh
Q 019103 213 YQIDPQTL---KVIRKD-IVRYKGREVRNLNELEFI--KGEVWANVWQTDCIARISHEDG----VVLGWVLLPNLRERLV 282 (346)
Q Consensus 213 ~vIDp~T~---kvi~~I-~V~~~G~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG----~Vv~~I~l~~l~~~~~ 282 (346)
+-|.++-+ ...+.+ .+|+.| |...--++.++ +|.||.+.-..+.|...|+++. +-...+.-.
T Consensus 249 y~V~T~~L~~~~~~~~v~~~G~kg-~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d------- 320 (381)
T 3q6k_A 249 YSVNTKELKQKGGKLNPELLGNRG-KYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTS------- 320 (381)
T ss_dssp EEEEHHHHSSTTCCCCCEEEEECC-TTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEEC-------
T ss_pred EEEEHHHhhCcchhhceEEeeecC-CCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEEC-------
Confidence 99864221 111222 233322 11111135554 5899999999999999999871 112333111
Q ss_pred hccCCCCceeeEEEEeCCCCEEEEecCCC
Q 019103 283 AAGYNGIDVLNGIAWDSNRNRIFVTGKLW 311 (346)
Q Consensus 283 ~~~~~~~~vlNGIA~d~~~~~LfVTGK~W 311 (346)
+....|.++++++++...+++++.-
T Consensus 321 ----~~l~~pd~~~i~~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 321 ----SRFVFGTDISVDSKGGLWFMSNGFP 345 (381)
T ss_dssp ----TTCCSEEEEEECTTSCEEEEECSCC
T ss_pred ----CCccccCeEEECCCCeEEEEECcch
Confidence 2334789999998886555666653
No 254
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.28 E-value=0.00028 Score=67.23 Aligned_cols=195 Identities=10% Similarity=0.049 Sum_probs=127.3
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEE
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTG 172 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v 172 (346)
++++.+. +........+.|++||.++.+.+ .+..|++||+.+++.+....-.... ...++.++. +.++...++.+
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs--~Dg~v~iWd~~~~~~~~~~~~h~~~-v~~~s~~~~-~l~sgs~d~~i 211 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGT--SSAEVQLWDVQQQKRLRNMTSHSAR-VGSLSWNSY-ILSSGSRSGHI 211 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEE--TTSCEEEEETTTTEEEEEECCCSSC-EEEEEEETT-EEEEEETTSEE
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeCCCCc-eEEEeeCCC-EEEEEeCCCce
Confidence 4555554 23445568999999998777766 4569999999999998887654332 234566655 44555677899
Q ss_pred EEEECCCC-cEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEE-EE-eccCCeeeeeceeeEee--C
Q 019103 173 FIYDQNNL-NKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRK-DI-VRYKGREVRNLNELEFI--K 245 (346)
Q Consensus 173 ~V~D~~tl-~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~-I~-V~~~G~pv~~lNELE~~--~ 245 (346)
.++|..+. ..+.++... ...+....++|+.+.....++.+.++|..+.+.... +. ......++ ..+.+. +
T Consensus 212 ~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V---~~~~~~p~~ 288 (420)
T 4gga_A 212 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV---KAVAWCPWQ 288 (420)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE---EEEEECTTC
T ss_pred eEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCce---eeeeeCCCc
Confidence 99997754 445555532 123444677899888877788999999887653211 11 11111122 223333 3
Q ss_pred CEEEEEe--cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 246 GEVWANV--WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 246 G~LyaNv--~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+.+++.. -.+.+|.+-|..+|+.+..+... .....+++.++++.+++++.
T Consensus 289 ~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~--------------~~v~~~~~~~~~~~lv~~sg 340 (420)
T 4gga_A 289 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--------------SQVCSILWSPHYKELISGHG 340 (420)
T ss_dssp TTEEEEEECTTTCEEEEEETTTTEEEEEEECS--------------SCEEEEEEETTTTEEEEEEC
T ss_pred ccEEEEEeecCCCEEEEEeCCccccceeeccc--------------cceeeeeecCCCCeEEEEEe
Confidence 4455433 34568999999999999988652 13467889999999988754
No 255
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.27 E-value=0.00019 Score=68.37 Aligned_cols=197 Identities=14% Similarity=0.100 Sum_probs=126.0
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEE--eCCEEEEEEee
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTL--LGEKLFQVTWL 168 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~--~g~~LY~ltw~ 168 (346)
.++|++.-..-...|..=|.+++++.|-++ + +++|++||+.||+++....+... ..-..++. +|+.|.. --.
T Consensus 93 p~~~l~ap~~~~d~y~~~l~wS~~n~lAvg--l--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las-gs~ 167 (420)
T 4gga_A 93 PDRILDAPEIRNDYYLNLVDWSSGNVLAVA--L--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTS 167 (420)
T ss_dssp CSEEEECTTCCCCTTCBCEEECTTSEEEEE--E--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EET
T ss_pred CceEEECCCCcccccceeEEECCCCEEEEE--e--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE-EEC
Confidence 466665422222334566888877765554 3 35999999999999988876432 12233444 4555444 456
Q ss_pred CCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcE-EEEEEeccCCeeeeeceeeEee-CC
Q 019103 169 QKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV-IRKDIVRYKGREVRNLNELEFI-KG 246 (346)
Q Consensus 169 ~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kv-i~~I~V~~~G~pv~~lNELE~~-~G 246 (346)
++.+.++|.++.+.+.++......-..+++|++.|.....+..+.++|..+... +.++.-.. ..+ ..+.+. +|
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~--~~~---~~~~~~~~g 242 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS--QEV---CGLRWAPDG 242 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS--SCE---EEEEECTTS
T ss_pred CCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccc--cce---eeeeecCCC
Confidence 799999999999999998753345566899999888877889999999876443 33333322 121 123333 56
Q ss_pred EEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 247 EVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 247 ~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
...+....++.|.+.|..+++..... +... .........++|.|.+..++.+
T Consensus 243 ~~l~s~~~D~~v~i~~~~~~~~~~~~----~~~~-----~~~~~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 243 RHLASGGNDNLVNVWPSAPGEGGWVP----LQTF-----TQHQGAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp SEEEEEETTSCEEEEESSCCSSCSCC----SEEE-----CCCSSCEEEEEECTTCTTEEEE
T ss_pred CeeeeeeccccceEEeecccccccee----eeee-----cccCCceeeeeeCCCcccEEEE
Confidence 66666667889999999888632110 0000 0112345779999988777655
No 256
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.26 E-value=0.00011 Score=74.92 Aligned_cols=184 Identities=9% Similarity=0.028 Sum_probs=122.8
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
......+.++++++++.|++ .+..|++||+.+++......- ........+.++++.|. +.-.++.+.++|......
T Consensus 430 ~~~v~~v~~s~~g~~l~sgs--~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQFALSGS--WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECK 506 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEE-EEETTSCEEEECTTSCEE
T ss_pred CCcEEEEEECCCCCEEEEEe--CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEE-EEeCCCEEEEEECCCCcc
Confidence 44457899999998888877 556999999999988777643 23333333333445444 445678999999765433
Q ss_pred EEEEecC--C---CceeEEeeCC--CEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecC
Q 019103 183 LEEFTHQ--M---KDGWGLATDG--KVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (346)
Q Consensus 183 i~ti~~~--~---peGwGLt~Dg--~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~ 254 (346)
....... . -....+++++ ..|+....+++|.++|..+.+...++.-.. .+ ++.+.+. +|.+.+..-.
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~--~~---v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT--GY---VSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS--SC---EEEEEECTTSSEEEEEET
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC--CC---EEEEEEeCCCCEEEEEeC
Confidence 3222111 1 1233466776 345555568899999999998876654322 22 3345555 6777777777
Q ss_pred CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 255 TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 255 sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
++.|.+-|..+++.+..+.. ....+.++|+|++..|..+..
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~--------------~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEA--------------NSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp TSBCEEEETTTTEEEECCBC--------------SSCEEEEEECSSSSEEEEEET
T ss_pred CCeEEEEECCCCceEEEecC--------------CCcEEEEEEcCCCcEEEEEcC
Confidence 89999999999998765522 125688999999887666543
No 257
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.26 E-value=1.5e-07 Score=90.48 Aligned_cols=147 Identities=14% Similarity=0.051 Sum_probs=79.6
Q ss_pred CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEEecCCCcee
Q 019103 115 NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGW 194 (346)
Q Consensus 115 d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~peGw 194 (346)
++++|+++. +..|..+|++||+++-+... ..... .-...++++|+..-.++.++.+|++|++.+.+.+...+...
T Consensus 9 ~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~-~~~~s-~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 9 ETLLFVSTL---DGSLHAVSKRTGSIKWTLKE-DPVLQ-VPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp TTEEEEEET---TSEEEEEETTTCCEEEEEEC-CCSCC-CC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred CCEEEEEcC---CCEEEEEECCCCCEEEEecC-CCcee-cceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 578998865 35999999999999888776 22221 12234566777766788999999999998877664311111
Q ss_pred --EEe-eCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEE
Q 019103 195 --GLA-TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGW 271 (346)
Q Consensus 195 --GLt-~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~ 271 (346)
... .+++.+|+...++.|+.+|++|++++-+..... .. .....++.||+..+ ...|..+|++||+++-.
T Consensus 84 ~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~----~~~p~~~~v~~~~~-dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 84 QASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---AD----SLSPSTSLLYLGRT-EYTITMYDTKTRELRWN 155 (369)
T ss_dssp TTCSCC-----CCCCEEEEEEEEECCC-----------------------------EEEEEE-EEEEECCCSSSSSCCCE
T ss_pred ccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cc----cccccCCEEEEEec-CCEEEEEECCCCCEEEe
Confidence 111 156678876556789999999999987666532 11 12235678998754 57899999999998766
Q ss_pred EEC
Q 019103 272 VLL 274 (346)
Q Consensus 272 I~l 274 (346)
+..
T Consensus 156 ~~~ 158 (369)
T 2hz6_A 156 ATY 158 (369)
T ss_dssp EEE
T ss_pred Eec
Confidence 543
No 258
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.26 E-value=0.00011 Score=69.02 Aligned_cols=186 Identities=9% Similarity=-0.021 Sum_probs=112.7
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
...+.|++||+++.+.+ ++.+++||.++++.......+. .-...+...++.+.++.-.++.+.++|..+.+.+.++
T Consensus 22 V~~v~fs~dg~~la~g~---~~~~~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 22 VTDYEFNQDQSCLILST---LKSFEIYNVHPVAHIMSQEMRH-LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CCEEEECTTSSEEEEEC---SSEEEEEEETTEEEEEEEECSC-CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCEEEEEc---CCEEEEEecCCcceeeeeecCC-eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 36899999998766543 3478999999988776665543 1122223345666666666789999999999999999
Q ss_pred ecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCC-cEEEEEEeccCCeeeeeceeeEeeCCEEEEE-ecCCCeEEEEeCC
Q 019103 187 THQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTL-KVIRKDIVRYKGREVRNLNELEFIKGEVWAN-VWQTDCIARISHE 264 (346)
Q Consensus 187 ~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~-kvi~~I~V~~~G~pv~~lNELE~~~G~LyaN-v~~sn~I~vID~~ 264 (346)
.+. ..-.++..+.+.++++- ++.|+++|..+. +.+.++.. +.. + ..+..+.+.+. --.++.|.+.|..
T Consensus 98 ~~~-~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~-----~~~-~--~~~s~~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 98 KVD-APVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR-----FGG-V--CEFSNGLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp ECS-SCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE-----EEE-E--EEEETTEEEEEESSCTTCEEEEECC
T ss_pred ECC-CceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc-----CCc-e--EEEEccEEEEeCCCcCcEEEEEECC
Confidence 875 34456666777776653 468999999887 65544443 111 1 11222444333 3456789999998
Q ss_pred CCeEEEEEEC----Cchhh---hhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 265 DGVVLGWVLL----PNLRE---RLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 265 TG~Vv~~I~l----~~l~~---~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
+++....-.- ..+.+ .+. .-....+.++|+|+++.|...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~----~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIK----AHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp C------------------CCEEEC----CCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCccccccccccccccCcccEEEE----ccCCceEEEEECCCCCEEEEEeCC
Confidence 8762111000 00000 000 012356889999998876655544
No 259
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.26 E-value=2.4e-05 Score=78.73 Aligned_cols=197 Identities=12% Similarity=-0.009 Sum_probs=113.9
Q ss_pred EEEe--cCC-E-EEEEcCCCCCCeEEEEECC--C-CcEEEEeccC-----CCeeEEEEEEeCCEEEEEEeeC--------
Q 019103 110 LLYA--END-T-LFESTGLYGRSSVRRVALE--T-GKVEAINQME-----GSYFGEGLTLLGEKLFQVTWLQ-------- 169 (346)
Q Consensus 110 L~~~--~d~-~-LyeStGlyg~s~V~~iDl~--T-gkv~~~~~l~-----~~~FgeGit~~g~~LY~ltw~~-------- 169 (346)
+.++ ||| + |+.+.. ....|..+|++ + ++...-...+ .......++++|++|+.+....
T Consensus 82 ~~~~~SPDg~~~la~~~~--~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 82 WAGVPRPAGGPLLVFTHF--GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp EEEECCSSSSCEEEEEBT--TTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred ceeeeecCCCeEEEEEEC--CCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 4454 777 5 565554 35689999988 4 6543333321 1233444556788888776542
Q ss_pred -CEEEEEECCC------CcEEEEEe-cC--CCceeEEeeCCCEEEE-E-CC------CCeEEEEeCC-CCc--EEEEEEe
Q 019103 170 -KTGFIYDQNN------LNKLEEFT-HQ--MKDGWGLATDGKVLFG-S-DG------SSMLYQIDPQ-TLK--VIRKDIV 228 (346)
Q Consensus 170 -~~v~V~D~~t------l~~i~ti~-~~--~peGwGLt~Dg~~Lyv-S-dG------s~~l~vIDp~-T~k--vi~~I~V 228 (346)
..++++|.++ .+. ..+. .+ ......++|||++|+. + ++ ..+|+++|.+ +++ ...++.-
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999988 544 3333 21 1133468999998865 4 33 2589999998 563 2333333
Q ss_pred ccCCeeeeeceeeEee-CCEEEEEecCCC--eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCce-eeEEEEeCCCCEE
Q 019103 229 RYKGREVRNLNELEFI-KGEVWANVWQTD--CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDV-LNGIAWDSNRNRI 304 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~-~G~LyaNv~~sn--~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~v-lNGIA~d~~~~~L 304 (346)
+..+. ...+.+. ||++|+..-.++ .|.++|+++|++...... ... ...+.... ...++++++++.+
T Consensus 239 ~~~~~----~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~---~~~---~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 239 GPEEA----IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR---EEE---FAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp ETTBC----EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC---SSB---SSCCCCSTTCCSEEECTTSCEE
T ss_pred CCCce----EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc---ccc---ccCccccccCceEeEeCCCEEE
Confidence 21111 1234454 676665443344 899999999986543321 100 00011110 3568999998888
Q ss_pred EEecCCCCcEEEEEE
Q 019103 305 FVTGKLWPKLYEINL 319 (346)
Q Consensus 305 fVTGK~Wp~l~ev~l 319 (346)
|...+.-.+||.+.+
T Consensus 309 ~~~~~~~~~l~~~d~ 323 (662)
T 3azo_A 309 VVHGKGAAVLGILDP 323 (662)
T ss_dssp EEEBSSSCEEEEEET
T ss_pred EEEEcCccEEEEEEC
Confidence 887664456776654
No 260
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.25 E-value=0.00012 Score=67.66 Aligned_cols=168 Identities=9% Similarity=-0.065 Sum_probs=107.7
Q ss_pred eEEEEECCCCcEEEEeccCCCeeEEEEEEeC---CEEEEEEeeCCEEEEEECCCCcEEEEEecC---CCceeEEeeCCCE
Q 019103 129 SVRRVALETGKVEAINQMEGSYFGEGLTLLG---EKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLATDGKV 202 (346)
Q Consensus 129 ~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g---~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~---~peGwGLt~Dg~~ 202 (346)
.+..+|..+++++..+..+...--..++... +.++++.-.++.+.++|..+.+.+..+... .-....++|||+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE
T ss_pred ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE
Confidence 5556677789888887765332123344432 334555557899999999999987766432 1245578899999
Q ss_pred EEEECCCCeEEEEeCCCCcEE-EEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhh
Q 019103 203 LFGSDGSSMLYQIDPQTLKVI-RKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRER 280 (346)
Q Consensus 203 LyvSdGs~~l~vIDp~T~kvi-~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~ 280 (346)
|.+...++.|.++|.++++.+ .++..+ +..+ ++.+.+. +|...+..- ++.|.+-|..+++.+..+.. +..
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~-h~~~---v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~--~~~- 256 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVD-EEAK---IKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT--YTI- 256 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCC-TTSC---EEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC--CBC-
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEecc-CCCC---EEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc--ccc-
Confidence 888777889999999999876 555541 2223 3456665 555444443 55999999999876544421 000
Q ss_pred hhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 281 LVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 281 ~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+..+... ..++|+|+++.|.+++.
T Consensus 257 ---~~~~~~~--~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 257 ---PEFKTGT--VTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp --------CC--EEEEECTTSSEEEEEET
T ss_pred ---ccccccc--eEEEECCCCCEEEEecC
Confidence 0000001 46999999998888544
No 261
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.25 E-value=5.4e-06 Score=76.64 Aligned_cols=199 Identities=8% Similarity=-0.025 Sum_probs=107.4
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCC--cEEEEecc-CCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCc---
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETG--KVEAINQM-EGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLN--- 181 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tg--kv~~~~~l-~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~--- 181 (346)
..+.|++|+.++.+.+ .+..|++||+.++ +.+..+.- ........+..+++.| ++.-.++.+.++|..+.+
T Consensus 15 ~~~~~s~~g~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 15 YEHAFNSQRTEFVTTT--ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRI-VTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SCCEECSSSSEEECCC--SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCE-EEEETTSSEEEC------CCC
T ss_pred EEEEECCCCCEEEEec--CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEE-EEEeCCCeEEEEEcCCCCcee
Confidence 6899999998777766 4569999999998 44443332 2233332233334444 444567899999998876
Q ss_pred EEEEEe-cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcE---EEEEEeccCCeeeeeceeeEee-CCEEEEEecCC
Q 019103 182 KLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV---IRKDIVRYKGREVRNLNELEFI-KGEVWANVWQT 255 (346)
Q Consensus 182 ~i~ti~-~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kv---i~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~s 255 (346)
...++. +. .-....+++|++.|++...++.|.++|.++.+. ...+.-. +..+ ++.+.+. +|..++..-.+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~---v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP-LRST---ILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS-CCSC---EEEEEECTTSSEEEEEESS
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc-cCCC---eEEEEEcCCCCEEEEEeCC
Confidence 333332 22 123344568899998887788999999988763 4444321 1122 3345565 56556655567
Q ss_pred CeEEEEeCCCCeEEEEEECCchh-----hhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEE
Q 019103 256 DCIARISHEDGVVLGWVLLPNLR-----ERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLY 315 (346)
Q Consensus 256 n~I~vID~~TG~Vv~~I~l~~l~-----~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ 315 (346)
+.|.+.|..++++.......... .... .........+.++|+|+++.|+..+. ...|+
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~i~ 230 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVC-AEYPSGGWVHAVGFSPSGNALAYAGH-DSSVT 230 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEE-ECCCCSSSEEEEEECTTSSCEEEEET-TTEEC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhh-hcccCCceEEEEEECCCCCEEEEEeC-CCcEE
Confidence 88999998654422111000000 0000 00011234688999999986666553 34443
No 262
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.21 E-value=0.00034 Score=63.52 Aligned_cols=194 Identities=8% Similarity=0.044 Sum_probs=118.5
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCC--cEEEEecc-CCCeeEEEEEEe---CCEEEEEEeeCCEEEEEECCC
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETG--KVEAINQM-EGSYFGEGLTLL---GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tg--kv~~~~~l-~~~~FgeGit~~---g~~LY~ltw~~~~v~V~D~~t 179 (346)
....++|++||+++.+++ .+..|++||+.++ +.+..+.- ..... .++.. .+.+.++.-.++.+.++|.++
T Consensus 11 ~V~~~~~s~~g~~las~s--~D~~v~iw~~~~~~~~~~~~l~gH~~~V~--~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS--SDKTIKIFEVEGETHKLIDTLTGHEGPVW--RVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp CEEEEEECTTSSEEEEEE--TTSCEEEEEBCSSCBCCCEEECCCSSCEE--EEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred ceEEEEECCCCCEEEEEe--CCCEEEEEecCCCCcEEEEEEccccCCeE--EEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 347899999998888877 5669999999754 44444432 22232 34432 134555556789999999987
Q ss_pred Cc--EEEEEec-C-CCceeEEeeC--CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee---------
Q 019103 180 LN--KLEEFTH-Q-MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--------- 244 (346)
Q Consensus 180 l~--~i~ti~~-~-~peGwGLt~D--g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--------- 244 (346)
.+ .+.++.. . .-....++|+ |+.|.++..+++|.++|..+.+.........+..++ +.+.+.
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v---~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV---NSASWAPATIEEDGE 163 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCE---EEEEECCCC------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCcc---ceEeecCCccccccc
Confidence 64 4444432 1 1133446676 778888777889999998775322111121111121 223332
Q ss_pred -----CCEEEEEecCCCeEEEEeCCCCe----EEEEEECCchhhhhhhccCCCCceeeEEEEeCCC--CEEEEecCCCCc
Q 019103 245 -----KGEVWANVWQTDCIARISHEDGV----VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR--NRIFVTGKLWPK 313 (346)
Q Consensus 245 -----~G~LyaNv~~sn~I~vID~~TG~----Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~--~~LfVTGK~Wp~ 313 (346)
+++.+|+.-.++.|.+-|..+++ .+..+.- + .+..++++|+|++ ..+++||-...+
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~---------H----~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---------H----SDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---------C----SSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC---------C----CCceEEEEECCCCCCceEEEEEECCCc
Confidence 24566766678889999988776 3333311 1 2346889999986 577888877776
Q ss_pred EEEEEE
Q 019103 314 LYEINL 319 (346)
Q Consensus 314 l~ev~l 319 (346)
+.--.+
T Consensus 231 v~iWd~ 236 (297)
T 2pm7_B 231 CIIWTQ 236 (297)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 655444
No 263
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.00014 Score=78.03 Aligned_cols=218 Identities=10% Similarity=0.055 Sum_probs=136.2
Q ss_pred EEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEE
Q 019103 94 QVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGF 173 (346)
Q Consensus 94 ~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~ 173 (346)
+.+.+.+| ......+.|++ |+++++.+ .+..|++||+++++.+..+..+.......+.++++.|+... .++.+.
T Consensus 50 ~~~~~~~~--~~~V~~l~fsp-g~~L~S~s--~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs-~dg~V~ 123 (902)
T 2oaj_A 50 EVVIKLED--RSAIKEMRFVK-GIYLVVIN--AKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGL-QNGSMI 123 (902)
T ss_dssp EEEEECSS--CCCEEEEEEET-TTEEEEEE--TTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEE-TTSCEE
T ss_pred EEEEEcCC--CCCEEEEEEcC-CCEEEEEE--CcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEc-CCCcEE
Confidence 34445555 33347999999 76666666 56799999999999988887555444433444566676665 478999
Q ss_pred EEECCCCcEEEEEec--------------CCCceeEEeeCC-CEEEEECCCCeEEEEeCCCCcEEEEEEecc-CCee---
Q 019103 174 IYDQNNLNKLEEFTH--------------QMKDGWGLATDG-KVLFGSDGSSMLYQIDPQTLKVIRKDIVRY-KGRE--- 234 (346)
Q Consensus 174 V~D~~tl~~i~ti~~--------------~~peGwGLt~Dg-~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~-~G~p--- 234 (346)
++|.++.+.. .+.. +.-....++|++ ..|.++..+..| ++|.++.+.++++.... .|.+
T Consensus 124 lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~ 201 (902)
T 2oaj_A 124 VYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGD 201 (902)
T ss_dssp EEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCST
T ss_pred EEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcc
Confidence 9999988764 2211 112345567754 567777778889 99999999887775430 0000
Q ss_pred ---------eeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccC-----CCCceeeEEEEe-
Q 019103 235 ---------VRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGY-----NGIDVLNGIAWD- 298 (346)
Q Consensus 235 ---------v~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~-----~~~~vlNGIA~d- 298 (346)
-..++.+.|. +|..+|+.-.++.|.+-|.++|+.+..-.+..+......... ......+.++|.
T Consensus 202 ~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 202 FSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp TCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred cccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 1234556665 677788877788999999999998765322111100000000 012256889995
Q ss_pred ---CCCCEEEEecCCC-----CcEEEEEE
Q 019103 299 ---SNRNRIFVTGKLW-----PKLYEINL 319 (346)
Q Consensus 299 ---~~~~~LfVTGK~W-----p~l~ev~l 319 (346)
|++..++++|... ..+..+.+
T Consensus 282 ~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 282 ENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred cCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 4555777777332 25555554
No 264
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.19 E-value=0.00024 Score=67.17 Aligned_cols=164 Identities=10% Similarity=0.051 Sum_probs=107.3
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCe--eEEEEEEeCCEEEEEEeeC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSY--FGEGLTLLGEKLFQVTWLQ 169 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~--FgeGit~~g~~LY~ltw~~ 169 (346)
.+.+.++.|... ...++|+|||+++.+++ ++.+.+|+..+++.+..... .... ....+.+++..+..+....
T Consensus 167 ~~~~~~~~~~~~--V~~v~fspdg~~l~s~s---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 167 LTEKFEIETRGE--VKDLHFSTDGKVVAYIT---GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp TEEEEEEECSSC--CCEEEECTTSSEEEEEC---SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred CcEEEEeCCCCc--eEEEEEccCCceEEecc---ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 355666777544 37999999998777655 35789999999987665543 2222 2333344555566555544
Q ss_pred C---EEEEEECCCCcEE----EEEecCC--CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeecee
Q 019103 170 K---TGFIYDQNNLNKL----EEFTHQM--KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNE 240 (346)
Q Consensus 170 ~---~v~V~D~~tl~~i----~ti~~~~--peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNE 240 (346)
. .+..+|..+.... ..+.... -....++|||+.|.+...+++|.++|.++++.+.++.-+ +..+ ++.
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g-H~~~---V~~ 317 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA-HSFA---ITE 317 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS-SSSC---EEE
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc-ccCC---EEE
Confidence 3 5667776555432 2232211 123457899999988777889999999999988776332 1123 335
Q ss_pred eEee-CCEEEEEecCCCeEEEEeCCC
Q 019103 241 LEFI-KGEVWANVWQTDCIARISHED 265 (346)
Q Consensus 241 LE~~-~G~LyaNv~~sn~I~vID~~T 265 (346)
+.|- ||+..|+.-.+++|-+.|..+
T Consensus 318 v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 6665 788888887899999988654
No 265
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.19 E-value=7.2e-05 Score=68.96 Aligned_cols=183 Identities=13% Similarity=0.039 Sum_probs=102.9
Q ss_pred CCCeEEEEECCCCcEEEEeccCCCeeEEEEEE-eCCEEEEEEeeC-----CEEEEEECCCCcEEEEEecC---CCceeEE
Q 019103 126 GRSSVRRVALETGKVEAINQMEGSYFGEGLTL-LGEKLFQVTWLQ-----KTGFIYDQNNLNKLEEFTHQ---MKDGWGL 196 (346)
Q Consensus 126 g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~-~g~~LY~ltw~~-----~~v~V~D~~tl~~i~ti~~~---~peGwGL 196 (346)
+...|.++|+++|+......-+.......+++ ++++|+.+.... ..++++|.++.+...-.... ......+
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~ 245 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFW 245 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEE
Confidence 55789999999998765554333333333444 456566554322 47999998765433222211 0122357
Q ss_pred eeCCCEEE-EEC--CCCe--EEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--CCEEEEE-e---------------c
Q 019103 197 ATDGKVLF-GSD--GSSM--LYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI--KGEVWAN-V---------------W 253 (346)
Q Consensus 197 t~Dg~~Ly-vSd--Gs~~--l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~--~G~LyaN-v---------------~ 253 (346)
++||++|+ +++ +... |+++|+++.+....... .+. + +.+. ||++++. . .
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~-----~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 246 IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM--PPC-----S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC--CSE-----E-EEEECSSSSEEEEEECCC----------CCC
T ss_pred CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC--CCC-----C-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 89999754 443 4445 99999999876433222 121 1 2232 5654442 2 1
Q ss_pred CCCeEEEEeCCCCeEEEEEECCchhh-h-hhhccCCCCceeeEEEEeCCCCEEEEecCC--CCcEEEEEEee
Q 019103 254 QTDCIARISHEDGVVLGWVLLPNLRE-R-LVAAGYNGIDVLNGIAWDSNRNRIFVTGKL--WPKLYEINLRE 321 (346)
Q Consensus 254 ~sn~I~vID~~TG~Vv~~I~l~~l~~-~-~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~--Wp~l~ev~l~~ 321 (346)
....|.++|+++|++...... ...- . ..+ .......++|+|++++|+.+... -+.||.+.+..
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~-~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCKH-STSWDVLDGD----RQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEEC-CCCCCCBTTB----SSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCT
T ss_pred CCCcEEEEecccCceEEccCC-CCcccccccc----ccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcc
Confidence 246899999999985322211 1000 0 000 00013446899999998877643 45688877643
No 266
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.16 E-value=6.2e-05 Score=72.23 Aligned_cols=163 Identities=12% Similarity=0.124 Sum_probs=96.2
Q ss_pred EEEEEec--CCCCcceeEEEecCCEEEEEcCCCCC-----------CeEEEEECCCCcE-------------EEEeccC-
Q 019103 95 VVNEFPH--DPRAFTQGLLYAENDTLFESTGLYGR-----------SSVRRVALETGKV-------------EAINQME- 147 (346)
Q Consensus 95 Vv~t~ph--d~~~FTqGL~~~~d~~LyeStGlyg~-----------s~V~~iDl~Tgkv-------------~~~~~l~- 147 (346)
++..+|. ...-+..+|+|.+||.||+++|..+. .+|.++|++. ++ ......+
T Consensus 118 i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG-~~p~~npf~~~~~~~~~i~a~G~ 196 (353)
T 2g8s_A 118 VFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG-EIPDDNPFIKESGVRAEIWSYGI 196 (353)
T ss_dssp EEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS-CCCTTCTTTTSTTSCTTEEEECC
T ss_pred EEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC-CCCCCCCCcCCCCCCccEEEEcC
Confidence 3445553 23345679999999999999985432 4799999874 21 0111122
Q ss_pred CCeeEEEEEEe--CCEEEEEEeeCC---EEEEEECCCC-----------------------------cEEEEEecC-CCc
Q 019103 148 GSYFGEGLTLL--GEKLFQVTWLQK---TGFIYDQNNL-----------------------------NKLEEFTHQ-MKD 192 (346)
Q Consensus 148 ~~~FgeGit~~--g~~LY~ltw~~~---~v~V~D~~tl-----------------------------~~i~ti~~~-~pe 192 (346)
.++ .|++.+ .++||+++...+ .+.++..... ..+..+... .|.
T Consensus 197 rnp--~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~ 274 (353)
T 2g8s_A 197 RNP--QGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVS 274 (353)
T ss_dssp SEE--EEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEE
T ss_pred cCc--cceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcc
Confidence 234 456665 589999987643 4444432110 011111111 344
Q ss_pred eeEEeeC------CCEEEEEC-CCCeEEEEeCCCCcEEEEEEe--ccCCeeeeeceeeEee-CCEEEEE-ecCCCeEEEE
Q 019103 193 GWGLATD------GKVLFGSD-GSSMLYQIDPQTLKVIRKDIV--RYKGREVRNLNELEFI-KGEVWAN-VWQTDCIARI 261 (346)
Q Consensus 193 GwGLt~D------g~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V--~~~G~pv~~lNELE~~-~G~LyaN-v~~sn~I~vI 261 (346)
|..+... .+.+|++| ..+.|+.++.+..+++....+ +..++|+. +... ||.||+. .+.++.|.+|
T Consensus 275 G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~----v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 275 GMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRD----VRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEE----EEECTTSCEEEEECSTTEEEEEE
T ss_pred eeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeE----EEECCCCcEEEEEeCCCCEEEEE
Confidence 5555432 25788888 688999999887666554433 22345654 5554 7899985 5567889998
Q ss_pred eCC
Q 019103 262 SHE 264 (346)
Q Consensus 262 D~~ 264 (346)
.++
T Consensus 351 ~~~ 353 (353)
T 2g8s_A 351 SPR 353 (353)
T ss_dssp EC-
T ss_pred eCC
Confidence 763
No 267
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.14 E-value=0.0012 Score=58.58 Aligned_cols=201 Identities=9% Similarity=0.032 Sum_probs=123.0
Q ss_pred EEEEEEe-cCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEE
Q 019103 94 QVVNEFP-HDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTG 172 (346)
Q Consensus 94 ~Vv~t~p-hd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v 172 (346)
++++++. +........+.++++++++.+.+ .+..|++||..+++.+....-.... ...+...+..+. +...++.+
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs--~Dg~v~iw~~~~~~~~~~~~~h~~~-~~~~~~~~~~l~-s~~~~~~~ 131 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGT--SSAEVQLWDVQQQKRLRNMTSHSAR-VGSLSWNSYILS-SGSRSGHI 131 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEE--TTSEEEEEETTTTEEEEEEECCSSC-EEEEEEETTEEE-EEETTSEE
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEE--CCCcEEEeecCCceeEEEecCccce-EEEeecCCCEEE-EEecCCce
Confidence 3455553 33455568999999998888877 5569999999999998887654332 234556666544 44556777
Q ss_pred EEEECCCC-cEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEe--ccCCeeeeeceeeEee--C
Q 019103 173 FIYDQNNL-NKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIV--RYKGREVRNLNELEFI--K 245 (346)
Q Consensus 173 ~V~D~~tl-~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V--~~~G~pv~~lNELE~~--~ 245 (346)
.+++..+. ..+.++... ......+.++++.|+.+..++.|.++|.++.+....... .....++. .+.+. +
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~---~~~~~~~~ 208 (318)
T 4ggc_A 132 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK---AVAWCPWQ 208 (318)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE---EEEECTTS
T ss_pred EeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceE---EEEecCCC
Confidence 77776654 444444421 123334567889888887889999999988664321111 11111221 12222 2
Q ss_pred C-EEEE-EecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec-CCCCcEE
Q 019103 246 G-EVWA-NVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG-KLWPKLY 315 (346)
Q Consensus 246 G-~Lya-Nv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG-K~Wp~l~ 315 (346)
+ .++. .-.....|.+-|..+++........ .....+++.++++.+++++ -....|+
T Consensus 209 ~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 209 SNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--------------SQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp TTEEEEEECTTTCEEEEEETTTCCEEEEEECS--------------SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred CcEEEEEecCCCCEEEEEecccccccccccce--------------eeeeeeeecccccceEEEEEcCCCEEE
Confidence 2 3333 3334556878888888876665331 1346688999999888754 3444444
No 268
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.14 E-value=3.7e-05 Score=73.84 Aligned_cols=189 Identities=9% Similarity=0.075 Sum_probs=115.4
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc-CCCeeEEEEEE--eCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM-EGSYFGEGLTL--LGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~~~FgeGit~--~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
....+.+++++.++.+.+ .+..|++||+.+.++ ..+.. .... ..++. .++.++++.-.++.+.++|..+.+.
T Consensus 211 ~~~~~~~~~~~~~l~~g~--~dg~i~~wd~~~~~~-~~~~~h~~~v--~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~ 285 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGD--NVGNVILLNMDGKEL-WNLRMHKKKV--THVALNPCCDWFLATASVDQTVKIWDLRQVRG 285 (435)
T ss_dssp CCCCEEEETTTTEEEEEC--SSSBEEEEESSSCBC-CCSBCCSSCE--EEEEECTTCSSEEEEEETTSBCCEEETTTCCS
T ss_pred cEEEEEECCCCCEEEEEe--CCCcEeeeccCccee-EEEecccceE--EeeeecCCCceEEEEecCcceeeEEecccccc
Confidence 346789999998777777 456999999975443 33322 2222 33444 4555776777789999999988877
Q ss_pred EEEEecC--CC---ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC--CeeeeeceeeEee-CC-EEEEEe-
Q 019103 183 LEEFTHQ--MK---DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK--GREVRNLNELEFI-KG-EVWANV- 252 (346)
Q Consensus 183 i~ti~~~--~p---eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~--G~pv~~lNELE~~-~G-~LyaNv- 252 (346)
..++... .. ....+++||++|+.+..+++|.++|..+++....+..... +.....+. ..+. ++ .+.+..
T Consensus 286 ~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 364 (435)
T 4e54_B 286 KASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK-AAWHPRYNLIVVGRY 364 (435)
T ss_dssp SSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB-CEECSSSSCEEEECC
T ss_pred cceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE-EEEcCCCCEEEEEEc
Confidence 6665321 11 2233578999998877789999999999887766544221 11100000 1111 12 233322
Q ss_pred ----------cCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCc
Q 019103 253 ----------WQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPK 313 (346)
Q Consensus 253 ----------~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~ 313 (346)
...+.|.+.|..+|+++..+.-.. ...+..-.||+|+++.| ++|- ..+
T Consensus 365 ~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-----------~~~v~s~~~fspdg~~l-asg~-d~~ 422 (435)
T 4e54_B 365 PDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-----------SSGISSLNEFNPMGDTL-ASAM-GYH 422 (435)
T ss_dssp CCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-----------CCCCCCEEEECTTSSCE-EEEC-SSE
T ss_pred CCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-----------CCcEEEEEEECCCCCEE-EEEc-CCc
Confidence 223568899999999988773211 11133334899998755 4554 344
No 269
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.13 E-value=8.5e-05 Score=77.48 Aligned_cols=195 Identities=7% Similarity=0.010 Sum_probs=123.7
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCC--cEEEEeccCCCeeEEEEEEeC---CEEEEEEeeCCEEEEEECCCCc
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETG--KVEAINQMEGSYFGEGLTLLG---EKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tg--kv~~~~~l~~~~FgeGit~~g---~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
...+.|++++.++.+++ .+..|++||+.++ +.+....-.... -..++... +.+.++.-.++.+.++|..+.+
T Consensus 12 V~~l~~s~dg~~latg~--~dg~I~vwd~~~~~~~~~~~l~~h~~~-V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCS--SDKTIKIFEVEGETHKLIDTLTGHEGP-VWRVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp EEEECCCSSSCCEEEEE--TTTEEEEEEEETTEEEEEEEECCCSSC-EEEEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred eEEEEECCCCCeEEEEE--CCCcEEEEecCCCCCccceeccCCcCc-eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 36889999998777766 4569999999854 444444322221 23344431 3444455568999999998886
Q ss_pred --EEEEEecC--CCceeEEeeC--CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-----------
Q 019103 182 --KLEEFTHQ--MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI----------- 244 (346)
Q Consensus 182 --~i~ti~~~--~peGwGLt~D--g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~----------- 244 (346)
.+..+... .-....++++ ++.+++...++.|.++|..+.+.........+..++ +.+.+.
T Consensus 89 ~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v---~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 89 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV---NSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCE---EEEEECCCC--------
T ss_pred ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCce---EEEEecCcccccccccc
Confidence 44454421 1234456788 888888888899999999887554444443322222 234443
Q ss_pred ---CCEEEEEecCCCeEEEEeCCCCe----EEEEEECCchhhhhhhccCCCCceeeEEEEeCCC--CEEEEecCCCCcEE
Q 019103 245 ---KGEVWANVWQTDCIARISHEDGV----VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR--NRIFVTGKLWPKLY 315 (346)
Q Consensus 245 ---~G~LyaNv~~sn~I~vID~~TG~----Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~--~~LfVTGK~Wp~l~ 315 (346)
+|..++....++.|.+.|..++. ++..+.- .....++++|+|++ ..+++||...+.|.
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~-------------h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-------------HSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC-------------CSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC-------------CCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence 35666666668889999998874 3333311 12356889999995 56667776777766
Q ss_pred EEEEe
Q 019103 316 EINLR 320 (346)
Q Consensus 316 ev~l~ 320 (346)
--.+.
T Consensus 233 iwd~~ 237 (753)
T 3jro_A 233 IWTQD 237 (753)
T ss_dssp EEEES
T ss_pred EecCC
Confidence 65553
No 270
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.13 E-value=0.00081 Score=62.53 Aligned_cols=188 Identities=8% Similarity=0.034 Sum_probs=112.2
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEE--eCCEEEEEEeeCCEEEEEECCCC
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTL--LGEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~--~g~~LY~ltw~~~~v~V~D~~tl 180 (346)
......+.|+|++.++.+++ .+..|.+||..+++......+.. ...-..++. +++.| ++.-.++.+.++|..+.
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASAS--FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL-ATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEE--TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECTT
T ss_pred CCcEEEEEECCCCCEEEEEE--CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE-EEEECCCeEEEEECCCC
Confidence 34457999999998887877 45699999999886433333321 111233444 34444 44456789999998776
Q ss_pred cE---EEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecC
Q 019103 181 NK---LEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (346)
Q Consensus 181 ~~---i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~ 254 (346)
+. +..+... .-....++||++.|..+..++.|.++|.++.+.........+..+ ++.+.+. +|..+|..-.
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~---v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST---VWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC---EEEEEECTTSSEEEEEET
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc---eEEEEECCCCCEEEEEeC
Confidence 43 3333321 113345678999888877788999999887764433333222223 3346665 5666666656
Q ss_pred CCeEEEEeCCCC---------------eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 255 TDCIARISHEDG---------------VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 255 sn~I~vID~~TG---------------~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+.+|.+-|.... +++.++. + ......+.|||+++++.|..++.
T Consensus 215 D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS--G----------FHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCCC---CEEEEEEEEC--S----------SCSSCEEEEEECTTTCCEEEEET
T ss_pred CCeEEEeccccCCCCccceeeccCCccceeEEec--C----------CCCCcEEEEEEecCCCEEEEEeC
Confidence 777777764221 1121110 0 01235678999999887665543
No 271
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.12 E-value=0.0014 Score=59.84 Aligned_cols=182 Identities=11% Similarity=0.018 Sum_probs=115.1
Q ss_pred eEEEecCCEEEEEcCCC--CCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee------CCEEEEEECCCC
Q 019103 109 GLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL------QKTGFIYDQNNL 180 (346)
Q Consensus 109 GL~~~~d~~LyeStGly--g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~------~~~v~V~D~~tl 180 (346)
..+.. ++.||+-.|.. ..+.+.++|+.+++-...-+++....+.+++..+++||+.--. .+.+++||+.+.
T Consensus 50 ~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 50 ACVFW-DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp EEEEE-TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred EEEEE-CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 44444 67899887742 2468999999999876666676666677788889999998543 367999999876
Q ss_pred cE--EEEEecCCCceeEEeeCCCEEEEECC----------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEE
Q 019103 181 NK--LEEFTHQMKDGWGLATDGKVLFGSDG----------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (346)
Q Consensus 181 ~~--i~ti~~~~peGwGLt~Dg~~LyvSdG----------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~L 248 (346)
+- +...+.+ ..+.+.+.-++.||+.-| .+.++++|+++.+-... .....+.... .+...+++|
T Consensus 129 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~-~~~~~~~~i 203 (306)
T 3ii7_A 129 SWHTKPSMLTQ-RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNH-GLVFVKDKI 203 (306)
T ss_dssp EEEEECCCSSC-CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSC-EEEEETTEE
T ss_pred ceEeCCCCcCC-cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcc-eEEEECCEE
Confidence 54 3333333 344455555668888544 56799999999865432 1211122111 244558888
Q ss_pred EEEec-----CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 249 WANVW-----QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 249 yaNv~-----~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
|+-=. ..+.+.+.|+++++ |..++.+.. ...-.+++.. ++++||.|..
T Consensus 204 ~v~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~p~---------~r~~~~~~~~--~~~i~v~GG~ 256 (306)
T 3ii7_A 204 FAVGGQNGLGGLDNVEYYDIKLNE---WKMVSPMPW---------KGVTVKCAAV--GSIVYVLAGF 256 (306)
T ss_dssp EEECCEETTEEBCCEEEEETTTTE---EEECCCCSC---------CBSCCEEEEE--TTEEEEEECB
T ss_pred EEEeCCCCCCCCceEEEeeCCCCc---EEECCCCCC---------CccceeEEEE--CCEEEEEeCc
Confidence 87421 24789999999986 554433321 1111233333 5688888874
No 272
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.11 E-value=2e-05 Score=75.71 Aligned_cols=194 Identities=9% Similarity=0.046 Sum_probs=118.6
Q ss_pred ecCCCCcceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEeccC---CCeeEEEEEEeCCEEEEEEeeCCEEEEE
Q 019103 100 PHDPRAFTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAINQME---GSYFGEGLTLLGEKLFQVTWLQKTGFIY 175 (346)
Q Consensus 100 phd~~~FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~---~~~FgeGit~~g~~LY~ltw~~~~v~V~ 175 (346)
||+..- ..|+|+|. +.++.+.+ .+..|.+||+.+++....+.+. .......+.+.++.++++.-.++.|.++
T Consensus 117 ~~~~~V--~~l~~~P~~~~~lasGs--~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 117 PFDRRA--TSLAWHPTHPSTVAVGS--KGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp ECSSCE--EEEEECSSCTTCEEEEE--TTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCCE--EEEEEeCCCCCEEEEEe--CCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 565443 68999984 46666655 4569999999998765555442 2233322332334444555667999999
Q ss_pred ECCCCcEEEEEecCC----CceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C-CEEE
Q 019103 176 DQNNLNKLEEFTHQM----KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K-GEVW 249 (346)
Q Consensus 176 D~~tl~~i~ti~~~~----peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~-G~Ly 249 (346)
|.++........... -..+.+++|++.|++...+..|.++|..+.+ +.++.. +..+ ++.+.+. + ..++
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~-~~~~~~--h~~~---v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE-LWNLRM--HKKK---VTHVALNPCCDWFL 266 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB-CCCSBC--CSSC---EEEEEECTTCSSEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce-eEEEec--ccce---EEeeeecCCCceEE
Confidence 987654333222211 1346678999999998888999999987543 222221 1122 3345554 3 3467
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcE
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKL 314 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l 314 (346)
+....+..|.+-|..+++....+.. . ..-....+.++|+|+++.|+.++. .+.|
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~---~-------~~h~~~v~~~~~spdg~~l~s~~~-D~~i 320 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLY---S-------LPHRHPVNAACFSPDGARLLTTDQ-KSEI 320 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSB---C-------CBCSSCEEECCBCTTSSEEEEEES-SSCE
T ss_pred EEecCcceeeEEecccccccceEEE---e-------eeccccccceeECCCCCeeEEEcC-CCEE
Confidence 7666678888888888764332211 0 011234678999999988776654 3443
No 273
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.11 E-value=0.0015 Score=59.47 Aligned_cols=197 Identities=13% Similarity=0.140 Sum_probs=120.6
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCC---CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeC
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ 169 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg---~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~ 169 (346)
.+.+...|..... .+++.. ++.||+-.|..+ .+.+.++|+.+++-...-+++....+.+++..+++||+.--.+
T Consensus 42 W~~~~~~p~~r~~--~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 118 (302)
T 2xn4_A 42 WHQVAELPSRRCR--AGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFD 118 (302)
T ss_dssp EEEECCCSSCCBS--CEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEC
T ss_pred EeEcccCCccccc--ceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCC
Confidence 3444444542222 355554 689999877543 2579999999998776666766556677888899999985433
Q ss_pred -----CEEEEEECCCCcEEE--EEecCCCceeEEeeCCCEEEEECC--------CCeEEEEeCCCCcEEEEEEeccCCee
Q 019103 170 -----KTGFIYDQNNLNKLE--EFTHQMKDGWGLATDGKVLFGSDG--------SSMLYQIDPQTLKVIRKDIVRYKGRE 234 (346)
Q Consensus 170 -----~~v~V~D~~tl~~i~--ti~~~~peGwGLt~Dg~~LyvSdG--------s~~l~vIDp~T~kvi~~I~V~~~G~p 234 (346)
+.+++||+.+.+-.. ..+.+ ..+.+.+.-++.||+.-| .+.++++|+++.+-... .....+
T Consensus 119 ~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~ 194 (302)
T 2xn4_A 119 GSTGLSSVEAYNIKSNEWFHVAPMNTR-RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI---AEMSTR 194 (302)
T ss_dssp SSCEEEEEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEE---CCCSSC
T ss_pred CCccCceEEEEeCCCCeEeecCCCCCc-ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC---CCCccc
Confidence 579999988765433 33333 344455555678888543 46799999999876532 221112
Q ss_pred eeeceeeEeeCCEEEEEec-----CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 235 VRNLNELEFIKGEVWANVW-----QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 235 v~~lNELE~~~G~LyaNv~-----~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
.... .+...+++||+--. ..+++.+.|+++++- ..++.+.. ...-.+++.. ++++||.|.
T Consensus 195 r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~~~---------~r~~~~~~~~--~~~i~v~GG 259 (302)
T 2xn4_A 195 RSGA-GVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAW---RQVADMNM---------CRRNAGVCAV--NGLLYVVGG 259 (302)
T ss_dssp CBSC-EEEEETTEEEEECCBSSSSBCCCEEEEETTTTEE---EEECCCSS---------CCBSCEEEEE--TTEEEEECC
T ss_pred cccc-cEEEECCEEEEECCCCCCcccceEEEEeCCCCCE---eeCCCCCC---------ccccCeEEEE--CCEEEEECC
Confidence 2111 24456888887532 256899999999864 33322211 0111233443 468888887
Q ss_pred CC
Q 019103 310 LW 311 (346)
Q Consensus 310 ~W 311 (346)
..
T Consensus 260 ~~ 261 (302)
T 2xn4_A 260 DD 261 (302)
T ss_dssp BC
T ss_pred cC
Confidence 53
No 274
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.10 E-value=0.00025 Score=67.14 Aligned_cols=179 Identities=8% Similarity=-0.003 Sum_probs=119.0
Q ss_pred eEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee-------------CCEEEEE
Q 019103 109 GLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-------------QKTGFIY 175 (346)
Q Consensus 109 GL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~-------------~~~v~V~ 175 (346)
|++...++.+|.+++ ++.+.|.+++.+-... .++.-+. +.-+.++|+.||-+... .+.++++
T Consensus 19 g~~~~~g~~iy~~n~-~d~~~ly~~~~dg~~~-~~l~~~~---~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 19 GLFCESDGEVFFSNT-NDNGRLYAMNIDGSNI-HKLSNDT---AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp TCEEEETTEEEEEEG-GGTTEEEEEETTSCSC-EEEEEEE---EEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred eEEEEeCCEEEEEeC-CCCceEEEEcCCCCCC-EEccCCc---eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 565555679999976 3578999999876543 2322121 35578899999988765 3689999
Q ss_pred ECCCCcEEEEEecCCCceeEEeeCCCEEEEEC----CCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEE
Q 019103 176 DQNNLNKLEEFTHQMKDGWGLATDGKVLFGSD----GSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWAN 251 (346)
Q Consensus 176 D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSd----Gs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaN 251 (346)
|.+..+ ...+... .+..+++++++||.+| +...|+.+|...-. ..+|.-.. .. .+.++++.||-+
T Consensus 94 ~~dg~~-~~~l~~~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~-~~------~~~~~g~~iy~t 162 (302)
T 3s25_A 94 KRNGHG-STVLDPD--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHY-LF------TCNTSDRYFYYN 162 (302)
T ss_dssp ETTSCC-CEEEECS--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSC-CC------CSEEETTEEEEE
T ss_pred eCCCCc-ceEeecC--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCC-ce------EeeEECCEEEEE
Confidence 988665 3334432 5567899999999876 57799999987533 33343321 11 256788899977
Q ss_pred ecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC-CCcEEEEEEe
Q 019103 252 VWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL-WPKLYEINLR 320 (346)
Q Consensus 252 v~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~-Wp~l~ev~l~ 320 (346)
.-....|.+++++.+... .| +.+ +..+++.|+++.||-|... -++|+++.+.
T Consensus 163 ~~g~~~Iy~~~l~g~~~~-~l-~~~---------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 163 NPKNGQLYRYDTASQSEA-LF-YDC---------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp CTTTCCEEEEETTTTEEE-EE-ECS---------------CEEEEEEEETTEEEEEEGGGTTEEEEECSS
T ss_pred eCCCceEEEEECCCCCEE-EE-eCC---------------CccceeeecCCEEEEEEcCCCcEEEEEECC
Confidence 666789999999887643 33 111 0124566888888877322 1567777764
No 275
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.10 E-value=0.00053 Score=60.96 Aligned_cols=182 Identities=15% Similarity=0.120 Sum_probs=114.3
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEE--eCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTL--LGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~--~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
|..-|.+++++.|-+ |. +++|++||+.||+.+..+.+... ..-..++. +++.| ++.-.++.+.++|.++++.
T Consensus 27 y~~~l~WS~~~~lAv--g~--D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l-~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 27 YLNLVDWSSGNVLAV--AL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp TCBCEEECTTSEEEE--EE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEE
T ss_pred cceEEEECCCCEEEE--Ee--CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEE-EEEECCCcEEEeecCCcee
Confidence 446789998875444 42 45999999999999988876432 12233444 34444 4445689999999999999
Q ss_pred EEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEEE
Q 019103 183 LEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIARI 261 (346)
Q Consensus 183 i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vI 261 (346)
+.++......-..++++++.|........+.+.+..+.........+.. ..+ ..+.+. +|+..++.-.+..|.+.
T Consensus 102 ~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~l~s~~~d~~i~iw 177 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS-QEV---CGLRWAPDGRHLASGGNDNLVNVW 177 (318)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS-SCE---EEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc-Cce---EEEEEcCCCCEEEEEecCcceeEE
Confidence 9998754345566888899888877777888888776544322222211 111 123232 45555666568889999
Q ss_pred eCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEE
Q 019103 262 SHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIF 305 (346)
Q Consensus 262 D~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~Lf 305 (346)
|.++++....... ...........+++.+++..++
T Consensus 178 d~~~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 178 PSAPGEGGWVPLQ---------TFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp ESSCBTTBSCCSE---------EECCCCSCEEEEEECTTSTTEE
T ss_pred ECCCCccccccee---------eecccCCceEEEEecCCCCcEE
Confidence 9988763211100 0001122346678888776554
No 276
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.09 E-value=0.0028 Score=58.40 Aligned_cols=200 Identities=8% Similarity=0.058 Sum_probs=116.4
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCc--EEEEeccC---CCeeEEEEEEeCCEEEEEEe
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGK--VEAINQME---GSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk--v~~~~~l~---~~~FgeGit~~g~~LY~ltw 167 (346)
.+.++++.-- ..-...+.++++ ++.+.+ .+..|++||+.+++ ....+... .......+.++++.|. +.-
T Consensus 4 ~~~~~~~~~h-~~~v~~~~~s~~--~las~~--~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~s 77 (330)
T 2hes_X 4 INLIKSLKLY-KEKIWSFDFSQG--ILATGS--TDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLA-AGS 77 (330)
T ss_dssp CEEEEEEECC-SSCEEEEEEETT--EEEEEE--SSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEE-EEE
T ss_pred cccceeeccC-CCceeeeccCCC--EEEEEc--CCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEE-EEe
Confidence 4556666521 222368889876 556656 55699999999863 44444222 2233332333445444 444
Q ss_pred eCCEEEEEECC-------CCcEEEEEec-C-CCceeEEeeCCCEEEEECCCCeEEEEeCCC----CcEEEEEEeccCCee
Q 019103 168 LQKTGFIYDQN-------NLNKLEEFTH-Q-MKDGWGLATDGKVLFGSDGSSMLYQIDPQT----LKVIRKDIVRYKGRE 234 (346)
Q Consensus 168 ~~~~v~V~D~~-------tl~~i~ti~~-~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T----~kvi~~I~V~~~G~p 234 (346)
.++.+.++|.. +.+.+.++.- . .-....++|||+.|.....+.+|.++|..+ .+.+..+.- +..+
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~--h~~~ 155 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE--HSQD 155 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC--CSSC
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc--CCCc
Confidence 57899999974 2345555542 1 123455788999988877788999999843 233333322 2222
Q ss_pred eeeceeeEee-CCEEEEEecCCCeEEEEeCCCC--eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCC-EEEEecCC
Q 019103 235 VRNLNELEFI-KGEVWANVWQTDCIARISHEDG--VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRN-RIFVTGKL 310 (346)
Q Consensus 235 v~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG--~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~-~LfVTGK~ 310 (346)
++.+.+. ++.++++.-.++.|.+-|..++ +.+..+.- + ....+.++|+|+++ ..+++|-.
T Consensus 156 ---v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~---------h----~~~v~~~~~~~~~~~~~l~s~s~ 219 (330)
T 2hes_X 156 ---VKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNG---------H----EGTVWSSDFDKTEGVFRLCSGSD 219 (330)
T ss_dssp ---EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC---------C----SSCEEEEEECCSSSSCEEEEEET
T ss_pred ---eEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC---------C----CCcEEEEEecCCCCeeEEEEEeC
Confidence 3345554 5666666666888888888777 44444421 1 12457899999842 34556555
Q ss_pred CCcEEE
Q 019103 311 WPKLYE 316 (346)
Q Consensus 311 Wp~l~e 316 (346)
..++.-
T Consensus 220 D~~v~i 225 (330)
T 2hes_X 220 DSTVRV 225 (330)
T ss_dssp TSCEEE
T ss_pred CCeEEE
Confidence 555443
No 277
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.09 E-value=0.00023 Score=73.63 Aligned_cols=184 Identities=10% Similarity=0.072 Sum_probs=106.9
Q ss_pred ceeEEEecCCE--EEEE-cCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEEeCCEEEEEEee------------CC
Q 019103 107 TQGLLYAENDT--LFES-TGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTLLGEKLFQVTWL------------QK 170 (346)
Q Consensus 107 TqGL~~~~d~~--LyeS-tGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~~g~~LY~ltw~------------~~ 170 (346)
..|+.++|||+ +|.. .+..+...|+++|++||+.+.. .++.. ..+...+ +++.||.+... ..
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCc
Confidence 46889999995 3433 2312337899999999997654 22222 1234466 78888877543 46
Q ss_pred EEEEEECCCCcE----EEEEec--CC-CceeEEeeCCCEEEEEC--C--CCeEEEEeCCCCc-EEEEEEeccCCeeeeec
Q 019103 171 TGFIYDQNNLNK----LEEFTH--QM-KDGWGLATDGKVLFGSD--G--SSMLYQIDPQTLK-VIRKDIVRYKGREVRNL 238 (346)
Q Consensus 171 ~v~V~D~~tl~~----i~ti~~--~~-peGwGLt~Dg~~LyvSd--G--s~~l~vIDp~T~k-vi~~I~V~~~G~pv~~l 238 (346)
+|++.+..|... +.+.+- .. -.+..+++||++|+++- + ++.|+++|.++.+ ...++....++.. .
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~--~- 285 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV--S- 285 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE--E-
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE--E-
Confidence 799999877643 222221 10 12345789999987732 2 4699999987763 2334444332211 1
Q ss_pred eeeEeeCCEEEEEecC---CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 239 NELEFIKGEVWANVWQ---TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 239 NELE~~~G~LyaNv~~---sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
-+...++++|+.... ...|.++|.+++....|-.+ .+ ...+++ .++++++.|+++..
T Consensus 286 -~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l---~~-------~~~~~~---~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 286 -LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL---IP-------ERQQVL---TVHSGSGYLFAEYM 345 (693)
T ss_dssp -EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE---EC-------CCSSCE---EEEEETTEEEEEEE
T ss_pred -EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE---ec-------CCCCEE---EEEEECCEEEEEEE
Confidence 144557787754332 25799999998764111111 10 112345 56677787776643
No 278
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.08 E-value=0.0019 Score=58.74 Aligned_cols=183 Identities=14% Similarity=0.144 Sum_probs=114.2
Q ss_pred eEEEecCCEEEEEcCCCC---CCeEEEEECCCCc---EEEEeccCCCeeEEEEEEeCCEEEEEEee-----CCEEEEEEC
Q 019103 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGK---VEAINQMEGSYFGEGLTLLGEKLFQVTWL-----QKTGFIYDQ 177 (346)
Q Consensus 109 GL~~~~d~~LyeStGlyg---~s~V~~iDl~Tgk---v~~~~~l~~~~FgeGit~~g~~LY~ltw~-----~~~v~V~D~ 177 (346)
+.+.. ++.||+-.|..+ .+.+.++|+.+++ -...-+++....+.+++..+++||+.--. .+.+++||+
T Consensus 57 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~ 135 (301)
T 2vpj_A 57 ASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDP 135 (301)
T ss_dssp EEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred cEEEE-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcC
Confidence 44444 578998877432 3579999999988 65555666555566778889999998432 468999998
Q ss_pred CCCcE--EEEEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEE
Q 019103 178 NNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVW 249 (346)
Q Consensus 178 ~tl~~--i~ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~Ly 249 (346)
.+.+- +...+.+ ..+.+.+.-++.||+.-| .+.++++|+++.+-... .....+.... .+...+++||
T Consensus 136 ~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~-~~~~~~~~i~ 210 (301)
T 2vpj_A 136 NIDQWSMLGDMQTA-REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGA-GVALLNDHIY 210 (301)
T ss_dssp TTTEEEEEEECSSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSC-EEEEETTEEE
T ss_pred CCCeEEECCCCCCC-cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccc-eEEEECCEEE
Confidence 77654 3344433 344455544677888643 57899999999876532 2211122111 2445688988
Q ss_pred EEecC-----CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC
Q 019103 250 ANVWQ-----TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW 311 (346)
Q Consensus 250 aNv~~-----sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W 311 (346)
+--.. .++|.+.|+++++-. .++.+.. ...-.+++.. +++|||.|...
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~W~---~~~~~p~---------~r~~~~~~~~--~~~i~v~GG~~ 263 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDSWT---TVTSMTT---------PRCYVGATVL--RGRLYAIAGYD 263 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTEEE---EECCCSS---------CCBSCEEEEE--TTEEEEECCBC
T ss_pred EEeCCCCCcccceEEEEeCCCCcEE---ECCCCCC---------cccceeEEEE--CCEEEEEcCcC
Confidence 74322 578999999999743 2322211 1112233333 46799988754
No 279
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.07 E-value=9.6e-07 Score=84.81 Aligned_cols=153 Identities=10% Similarity=-0.004 Sum_probs=78.2
Q ss_pred cCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC-eeEEEEEE-eCCEEEEEEeeCCEEEEEECCCCcEEEEEecCCC
Q 019103 114 ENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS-YFGEGLTL-LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMK 191 (346)
Q Consensus 114 ~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~-~FgeGit~-~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~p 191 (346)
.++++|++.+ .+..|..+|++||+.+-+...... .......+ .++.||+.+. ++.++.+|++|++++.+++.+
T Consensus 47 ~~g~~~v~~s--~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~-dg~v~a~D~~tG~~~w~~~~~-- 121 (369)
T 2hz6_A 47 VEEPAFLPDP--NDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKK-QDIWYVIDLLTGEKQQTLSSA-- 121 (369)
T ss_dssp ---CCEEECT--TTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEE-EEEEEEECCC-------------
T ss_pred cCCCEEEEeC--CCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeC-CCEEEEEECCCCcEEEEecCC--
Confidence 4567777654 456899999999988666544311 00000122 4677887664 578999999999999988764
Q ss_pred ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEE
Q 019103 192 DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGW 271 (346)
Q Consensus 192 eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~ 271 (346)
.....+++++.+|+...+..|+.+|++|++++-+........+.- .... ..++.+|+... ...|..+|++||+++-.
T Consensus 122 ~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~-~~~~-~~~~~v~~~~~-dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 122 FADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLP-EDDV-DYKMSHFVSNG-DGLVVTVDSESGDVLWI 198 (369)
T ss_dssp -----------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCC-CCCT-TCCCCEEEEET-SCEEEEECTTTCCEEEE
T ss_pred CcccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccc-cCCc-cccceEEEECC-CCEEEEEECCCCcEEEE
Confidence 223467789999997667799999999999876666543111210 0000 01378888764 67899999999999876
Q ss_pred EEC
Q 019103 272 VLL 274 (346)
Q Consensus 272 I~l 274 (346)
.++
T Consensus 199 ~~~ 201 (369)
T 2hz6_A 199 QNY 201 (369)
T ss_dssp EEC
T ss_pred ecC
Confidence 654
No 280
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.02 E-value=0.00046 Score=62.93 Aligned_cols=147 Identities=14% Similarity=0.008 Sum_probs=88.7
Q ss_pred eeEEEecCCE-EEEEcCCC--CCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee----------------
Q 019103 108 QGLLYAENDT-LFESTGLY--GRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL---------------- 168 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGly--g~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~---------------- 168 (346)
..+.++|||+ |+...... +...|.++|+++|+.......+. ...-..+++|+.|+.+...
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAW 140 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccccee
Confidence 5789999994 44333222 45579999999998766555443 3333334467777776532
Q ss_pred ----------CCEEEEEECCCCcEEEEEecCCCceeEEeeCCCEEEEECC---------CCeEEEEeCCCCcEEEEEEec
Q 019103 169 ----------QKTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKVLFGSDG---------SSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 169 ----------~~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~LyvSdG---------s~~l~vIDp~T~kvi~~I~V~ 229 (346)
...++++|.++.+.+..+..+......+++|| .+|+++. ...|+.+| +.+.. .+.-+
T Consensus 141 ~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~ 216 (347)
T 2gop_A 141 FDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEE-KMFEK 216 (347)
T ss_dssp ---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEE-EEEEE
T ss_pred ecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceE-EeccC
Confidence 36799999998876454432224566788999 8888742 34799999 55543 33221
Q ss_pred cCCeeeeeceeeEeeCC-EEE-EEecC------CCeEEEEeCCCCeE
Q 019103 230 YKGREVRNLNELEFIKG-EVW-ANVWQ------TDCIARISHEDGVV 268 (346)
Q Consensus 230 ~~G~pv~~lNELE~~~G-~Ly-aNv~~------sn~I~vID~~TG~V 268 (346)
..+. .+ -.|| +|+ +.... ...|.++| +|+.
T Consensus 217 ---~~~~---~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~ 254 (347)
T 2gop_A 217 ---VSFY---AV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV 254 (347)
T ss_dssp ---ESEE---EE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE
T ss_pred ---ccee---eE-CCCCCEEEEEEccccCCccccceEEEEC--CCce
Confidence 1111 23 2344 454 44322 35788998 6664
No 281
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.01 E-value=0.0001 Score=72.29 Aligned_cols=211 Identities=9% Similarity=-0.050 Sum_probs=121.0
Q ss_pred EEEEecCCCCcceeEEEecCCE-EEE---EcCCCCCCeEEEEECCCC--------cEEEEecc----CCCeeEEEEEEe-
Q 019103 96 VNEFPHDPRAFTQGLLYAENDT-LFE---STGLYGRSSVRRVALETG--------KVEAINQM----EGSYFGEGLTLL- 158 (346)
Q Consensus 96 v~t~phd~~~FTqGL~~~~d~~-Lye---StGlyg~s~V~~iDl~Tg--------kv~~~~~l----~~~~FgeGit~~- 158 (346)
..+++++... ..+.|++||. |++ +++ .+..|++||+.++ +.+..+.. .... .+++..
T Consensus 86 ~~~~~~~~~v--~~l~~spdg~~lav~~~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~~p 159 (434)
T 2oit_A 86 GLLVPMKFPI--HHLALSCDNLTLSACMMSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV--IDMKWNP 159 (434)
T ss_dssp CEEECCSSCE--EEEEECTTSCEEEEEEEETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE--EEEEECS
T ss_pred cccccCCCcc--cEEEEcCCCCEEEEEEeccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCce--EEEEECC
Confidence 3456664333 7999999986 444 555 5679999998775 22222322 2223 345554
Q ss_pred -CCEEEEEEeeCCEEEEEECCCCcEEEEEe-cC-CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccC---C
Q 019103 159 -GEKLFQVTWLQKTGFIYDQNNLNKLEEFT-HQ-MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK---G 232 (346)
Q Consensus 159 -g~~LY~ltw~~~~v~V~D~~tl~~i~ti~-~~-~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~---G 232 (346)
++.++++.-.++.+.++|.++.+.+.... +. .......++||+.|++...+++|.++|++ ++...++..... +
T Consensus 160 ~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~ 238 (434)
T 2oit_A 160 TVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESD 238 (434)
T ss_dssp SCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTT
T ss_pred CCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCC
Confidence 34566666778999999999886554332 22 23445568899999998888999999998 666666654321 1
Q ss_pred eeeeeceeeEeeCCEEEE---EecC-----CCeEEEEeCCCCe---EEEEEECCchhhhhhhccCCCCceeeEEEEeCCC
Q 019103 233 REVRNLNELEFIKGEVWA---NVWQ-----TDCIARISHEDGV---VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR 301 (346)
Q Consensus 233 ~pv~~lNELE~~~G~Lya---Nv~~-----sn~I~vID~~TG~---Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~ 301 (346)
++ .....+.+.....|+ .... ...+.+.|..+.+ -..+..+.++.... .+.+.. .. -+.+-++.
T Consensus 239 ~~-~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~--~~~r~~-~~-~~~~l~dw 313 (434)
T 2oit_A 239 HP-VRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGS--CTERQH-HY-YLSYIEEW 313 (434)
T ss_dssp SC-EEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCC--CSSSCC-CE-EEEEEGGG
T ss_pred Cc-eeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCC--CCCcCc-ce-eeehhccC
Confidence 11 123346666443333 1111 1236666665431 12222222221000 000111 11 24455888
Q ss_pred CEEEEecCCCCcEEEEE
Q 019103 302 NRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 302 ~~LfVTGK~Wp~l~ev~ 318 (346)
+.+|||+.....+--+.
T Consensus 314 ~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 314 DLVLAASAASTEVSILA 330 (434)
T ss_dssp TEEEEEETTCSBCEEEE
T ss_pred CEEEEecCCCCceeEEE
Confidence 99999998888776665
No 282
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.01 E-value=3.9e-05 Score=79.51 Aligned_cols=206 Identities=8% Similarity=0.066 Sum_probs=111.9
Q ss_pred eeEEEecCCE-EEEEcCC------CCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCC
Q 019103 108 QGLLYAENDT-LFESTGL------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGl------yg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl 180 (346)
..+.++|||+ |+.++.. .....+.++|+++|+.......+........+++|++|.-. .++.+++.|..+.
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCC
Confidence 3578899995 4444321 01257889999999865433334444555677788776544 4789999999887
Q ss_pred cEEEEEecCCC---------------------ceeEEeeCCCEEE-EE-CCC----------------------------
Q 019103 181 NKLEEFTHQMK---------------------DGWGLATDGKVLF-GS-DGS---------------------------- 209 (346)
Q Consensus 181 ~~i~ti~~~~p---------------------eGwGLt~Dg~~Ly-vS-dGs---------------------------- 209 (346)
+.. ++..... .+...+|||++|. .+ |.+
T Consensus 143 ~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 143 PSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp CCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred ceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 644 3322101 1356899999764 43 222
Q ss_pred ------CeEEEEeCCC---CcE--EEEEEeccC--CeeeeeceeeEee-CCEEEEEecC--CC--eEEEEeCCCCeEEEE
Q 019103 210 ------SMLYQIDPQT---LKV--IRKDIVRYK--GREVRNLNELEFI-KGEVWANVWQ--TD--CIARISHEDGVVLGW 271 (346)
Q Consensus 210 ------~~l~vIDp~T---~kv--i~~I~V~~~--G~pv~~lNELE~~-~G~LyaNv~~--sn--~I~vID~~TG~Vv~~ 271 (346)
.+|+++|.++ .+. ..++..... +.. ..+..+.+. ||+++|.... ++ .|.++|+++|+-...
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD-HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSC-EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCC-eEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 1688889888 632 223332110 111 123344454 7875443222 22 699999999871000
Q ss_pred EECCchhhhhhhccCCCCc--eeeEEEEeCCCCEEE-Eec--CCCCcEEEEEE
Q 019103 272 VLLPNLRERLVAAGYNGID--VLNGIAWDSNRNRIF-VTG--KLWPKLYEINL 319 (346)
Q Consensus 272 I~l~~l~~~~~~~~~~~~~--vlNGIA~d~~~~~Lf-VTG--K~Wp~l~ev~l 319 (346)
. . .+.....+....-.+ ....++|+|||+.++ ... ..|..||.+.+
T Consensus 301 ~-~-~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 301 C-L-VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp E-C-GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred e-e-EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 0 0 000000000000001 123678999999876 442 34677887765
No 283
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00014 Score=75.63 Aligned_cols=180 Identities=7% Similarity=0.031 Sum_probs=115.8
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEE-----------------------------EeccCCCeeEEEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEA-----------------------------INQMEGSYFGEGL 155 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~-----------------------------~~~l~~~~FgeGi 155 (346)
-++..++++|||+++.|++ .+.+|+ |..+++.+. ...++...+..++
T Consensus 16 ~~v~sv~~SpDG~~iASas--~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTF--PDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp SSSCCEEECTTSCEEEECS--SSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred ccEEEEEECCCCCEEEEEc--CCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 4456789999999999988 566776 665554221 1111223334444
Q ss_pred EE--eCCEEEEEEeeCCEEEEEECCCCcEEEEEecCC------CceeEEeeCCCEEEEECCCCeEEEEeCCCCcE-----
Q 019103 156 TL--LGEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQM------KDGWGLATDGKVLFGSDGSSMLYQIDPQTLKV----- 222 (346)
Q Consensus 156 t~--~g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~------peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kv----- 222 (346)
+. +|..|-+++ .++.+.++|.++ .+.++++.+ -...+++|||+.|+++..+++|.++|.++.+.
T Consensus 92 awSPdG~~LAs~s-~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 92 KPSPIDDWMAVLS-NNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EECSSSSCEEEEE-TTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EECCCCCEEEEEe-CCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 44 445555444 568899999665 666666221 13355779999999998899999999998763
Q ss_pred --EEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeE---EEEEE-CCchhhhhhhccCCCCceeeEEE
Q 019103 223 --IRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVV---LGWVL-LPNLRERLVAAGYNGIDVLNGIA 296 (346)
Q Consensus 223 --i~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~V---v~~I~-l~~l~~~~~~~~~~~~~vlNGIA 296 (346)
+.++..+..|+. ..+.-+.+-.+- .|+.-.++.|.+.|.++++. ..++. .. ......+|
T Consensus 169 i~l~ti~~~~~gh~-~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h-------------~~~V~sva 233 (588)
T 2j04_A 169 YFESSIRLSDAGSK-DWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNAS-------------RRKITDLK 233 (588)
T ss_dssp EEEEEEECSCTTCC-CCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCC-------------SSCCCCEE
T ss_pred eeeeeeeccccccc-ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccc-------------cCcEEEEE
Confidence 667765554432 223345555333 66666789999999999883 34442 11 12456789
Q ss_pred EeCCCCEEEEec
Q 019103 297 WDSNRNRIFVTG 308 (346)
Q Consensus 297 ~d~~~~~LfVTG 308 (346)
|+ ++.|.+++
T Consensus 234 Fs--g~~LASa~ 243 (588)
T 2j04_A 234 IV--DYKVVLTC 243 (588)
T ss_dssp EE--TTEEEEEC
T ss_pred EE--CCEEEEEe
Confidence 98 57888886
No 284
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.95 E-value=0.00027 Score=64.96 Aligned_cols=206 Identities=11% Similarity=0.092 Sum_probs=115.0
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc---CCCeeEEEEEEe---CCEEEEEEee
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM---EGSYFGEGLTLL---GEKLFQVTWL 168 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~~~~FgeGit~~---g~~LY~ltw~ 168 (346)
+++++..........+.|+++|+++.+++ .+..|++||+.+++......+ ..... .++.. .+.+.++.-.
T Consensus 4 ~~~~~~~~H~~~V~~v~~s~~g~~lasgs--~D~~v~lwd~~~~~~~~~~~l~gH~~~V~--~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 4 VINTVDTSHEDMIHDAQMDYYGTRLATCS--SDRSVKIFDVRNGGQILIADLRGHEGPVW--QVAWAHPMYGNILASCSY 79 (316)
T ss_dssp ----------CCEEEEEECGGGCEEEEEE--TTTEEEEEEEETTEEEEEEEEECCSSCEE--EEEECCGGGSSCEEEEET
T ss_pred eeeeecccccCeEEEeeEcCCCCEEEEEe--CCCeEEEEEecCCCcEEEEEEcCCCccEE--EEEeCCCCCCCEEEEEEC
Confidence 34444322344457899999998888877 566999999998864322222 22232 34442 1344445556
Q ss_pred CCEEEEEECCCCc--EEEEEec-C-CCceeEEeeC--CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeE
Q 019103 169 QKTGFIYDQNNLN--KLEEFTH-Q-MKDGWGLATD--GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELE 242 (346)
Q Consensus 169 ~~~v~V~D~~tl~--~i~ti~~-~-~peGwGLt~D--g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE 242 (346)
++.+.++|.++.+ .+.++.. . .-....++|| |..|.....++.|.++|..+.......... .++. ...+.+.
T Consensus 80 D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-~~h~-~~v~~~~ 157 (316)
T 3bg1_A 80 DRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-NAHT-IGCNAVS 157 (316)
T ss_dssp TSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-TSSS-SCBCCCE
T ss_pred CCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-cccc-CCcceEE
Confidence 7999999998763 4455532 2 1245567777 667777777889999998765322111111 1111 0112222
Q ss_pred ee------------------CCEEEEEecCCCeEEEEeCCCCe---EEEEEECCchhhhhhhccCCCCceeeEEEEeCCC
Q 019103 243 FI------------------KGEVWANVWQTDCIARISHEDGV---VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNR 301 (346)
Q Consensus 243 ~~------------------~G~LyaNv~~sn~I~vID~~TG~---Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~ 301 (346)
+. +++.+|..-.++.|.+-|..++. .+..+ .. + .+..++++|+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-----~~----h----~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 158 WAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-----EA----H----SDWVRDVAWAPSI 224 (316)
T ss_dssp ECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-----BC----C----SSCEEEEECCCCS
T ss_pred EccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-----cc----C----CCceEEEEecCCC
Confidence 22 13566666667788888877552 22222 10 1 2346889999986
Q ss_pred ---CEEEEecCCCCcEEEEEE
Q 019103 302 ---NRIFVTGKLWPKLYEINL 319 (346)
Q Consensus 302 ---~~LfVTGK~Wp~l~ev~l 319 (346)
..++++|-...+|.--.+
T Consensus 225 ~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 225 GLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp SCSCCEEEEEETTCEEEEEEC
T ss_pred CCCCceEEEEcCCCeEEEEEc
Confidence 356677766666554443
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.95 E-value=0.00016 Score=72.33 Aligned_cols=152 Identities=11% Similarity=0.123 Sum_probs=89.5
Q ss_pred EEEEEEe-CCEEEEEEeeCCEEEEEECCCCcE--EEEEecC--CCc------eeEEeeC---CCEEEEECC---------
Q 019103 152 GEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNK--LEEFTHQ--MKD------GWGLATD---GKVLFGSDG--------- 208 (346)
Q Consensus 152 geGit~~-g~~LY~ltw~~~~v~V~D~~tl~~--i~ti~~~--~pe------GwGLt~D---g~~LyvSdG--------- 208 (346)
+.+|+.+ +++||++.-..++|++++..+++. +..++.. .+. |++++|| +++||+++.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 3567764 357999887667899998765543 3333311 112 7778887 899999862
Q ss_pred ----CCeEEEEeCC--CCcEEE-EEEe-ccCCeeeeeceeeEee-CCEEEEEecC-------------------------
Q 019103 209 ----SSMLYQIDPQ--TLKVIR-KDIV-RYKGREVRNLNELEFI-KGEVWANVWQ------------------------- 254 (346)
Q Consensus 209 ----s~~l~vIDp~--T~kvi~-~I~V-~~~G~pv~~lNELE~~-~G~LyaNv~~------------------------- 254 (346)
.+.|+.++.. +.++.. ++.+ +......++.+.|.+. ||+||++...
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~ 188 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELN 188 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHH
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccccccccccccccc
Confidence 2478777643 222211 1112 1111223456677776 7899999764
Q ss_pred -------CCeEEEEeCCCCeE-----------EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEE
Q 019103 255 -------TDCIARISHEDGVV-----------LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYE 316 (346)
Q Consensus 255 -------sn~I~vID~~TG~V-----------v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~e 316 (346)
...|.+||++ |++ ...+.. + ..-|.|+||+|+ .+||++--....-=|
T Consensus 189 aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~-G------------~RNp~gla~dp~-G~L~~~d~g~~~~de 253 (454)
T 1cru_A 189 GKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTL-G------------HRNPQGLAFTPN-GKLLQSEQGPNSDDE 253 (454)
T ss_dssp TTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEB-C------------CSEEEEEEECTT-SCEEEEEECSSSCEE
T ss_pred ccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEE-C------------CCCcceEEECCC-CCEEEEecCCCCCeE
Confidence 2468888875 331 111111 1 236899999995 678888644333333
Q ss_pred EE
Q 019103 317 IN 318 (346)
Q Consensus 317 v~ 318 (346)
|.
T Consensus 254 in 255 (454)
T 1cru_A 254 IN 255 (454)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 286
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.95 E-value=0.0024 Score=66.23 Aligned_cols=195 Identities=15% Similarity=0.116 Sum_probs=117.2
Q ss_pred eeEEEecCCEEEEEcCCCC-----------CCeEEEEECCCCcEEEE--eccCC---CeeEEEEEEeCCEEEEEEee---
Q 019103 108 QGLLYAENDTLFESTGLYG-----------RSSVRRVALETGKVEAI--NQMEG---SYFGEGLTLLGEKLFQVTWL--- 168 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg-----------~s~V~~iDl~Tgkv~~~--~~l~~---~~FgeGit~~g~~LY~ltw~--- 168 (346)
.++.++||..||.++...+ ...|.++++.|++.... ...+. ...+..++.+|+.|+...+.
T Consensus 212 ~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 291 (741)
T 1yr2_A 212 SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD 291 (741)
T ss_dssp CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC
T ss_pred ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC
Confidence 4778888855666653222 34699999998863211 12222 23344455567778777664
Q ss_pred -CCEEEEEECCCC--cEEEEEecC-CCceeEEeeCCCEEEE-ECC---CCeEEEEeCCCCc-EEEEEEeccCCeeeeece
Q 019103 169 -QKTGFIYDQNNL--NKLEEFTHQ-MKDGWGLATDGKVLFG-SDG---SSMLYQIDPQTLK-VIRKDIVRYKGREVRNLN 239 (346)
Q Consensus 169 -~~~v~V~D~~tl--~~i~ti~~~-~peGwGLt~Dg~~Lyv-SdG---s~~l~vIDp~T~k-vi~~I~V~~~G~pv~~lN 239 (346)
.+.++++|.++. +....+... ...-..+++||++||+ +|. ...|+.+|.++.+ ....+.-.... .+.
T Consensus 292 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~----~l~ 367 (741)
T 1yr2_A 292 PVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD----NLE 367 (741)
T ss_dssp SCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS----EEE
T ss_pred CcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC----eEE
Confidence 468999998876 314445432 1122225689998877 662 4579999998863 33333222111 233
Q ss_pred eeEeeCCEEEEEecCC--CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC---CcE
Q 019103 240 ELEFIKGEVWANVWQT--DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW---PKL 314 (346)
Q Consensus 240 ELE~~~G~LyaNv~~s--n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W---p~l 314 (346)
.+.+.+++++++.-.. ..|.++|.. |+.+..+.++ ......+++++|++++++++.... +.+
T Consensus 368 ~~~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~------------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 434 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDAKSQVLAFDLD-GKPAGAVSLP------------GIGSASGLSGRPGDRHAYLSFSSFTQPATV 434 (741)
T ss_dssp EEEEEBTEEEEEEEETTEEEEEEEETT-SCEEEECBCS------------SSCEEEEEECCBTCSCEEEEEEETTEEEEE
T ss_pred EEEEECCEEEEEEEECCEEEEEEEeCC-CCceeeccCC------------CCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 4566788887765433 358888974 5555555431 123567899999999888764443 467
Q ss_pred EEEEE
Q 019103 315 YEINL 319 (346)
Q Consensus 315 ~ev~l 319 (346)
|...+
T Consensus 435 ~~~d~ 439 (741)
T 1yr2_A 435 LALDP 439 (741)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 76654
No 287
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.95 E-value=0.00063 Score=69.91 Aligned_cols=194 Identities=11% Similarity=0.141 Sum_probs=113.7
Q ss_pred eeEEEecCCE-EEEEcCCC----------CCCeEEEEECCCCcEE--EEeccC---CCeeEEEEEEeCCEEEEEEeeC--
Q 019103 108 QGLLYAENDT-LFESTGLY----------GRSSVRRVALETGKVE--AINQME---GSYFGEGLTLLGEKLFQVTWLQ-- 169 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGly----------g~s~V~~iDl~Tgkv~--~~~~l~---~~~FgeGit~~g~~LY~ltw~~-- 169 (346)
.++.+++||+ |+.+.... ....|.++|+.|++.. .....+ ...++..++.+|+.|+...+..
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 5899999985 44443211 1346999999998732 111221 2334555666777787776654
Q ss_pred -CEEEEEECCCCcEEEEEecC-CCceeEEeeCCCEEEE-EC---CCCeEEEEeCCCCcE--EEEEEeccCCeeeeeceee
Q 019103 170 -KTGFIYDQNNLNKLEEFTHQ-MKDGWGLATDGKVLFG-SD---GSSMLYQIDPQTLKV--IRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 170 -~~v~V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~Lyv-Sd---Gs~~l~vIDp~T~kv--i~~I~V~~~G~pv~~lNEL 241 (346)
..++++|..+.+. .++... ...-..+.+||+ +|+ +| +..+|+.+|.++.+. ...+.-..... .+..+
T Consensus 251 ~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~l~~~ 325 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF-RLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA---SLLSV 325 (695)
T ss_dssp EEEEEEECTTCSSC-EEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC---EEEEE
T ss_pred ceEEEEEcCCCCce-EEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC---eEEEE
Confidence 4889998766543 333322 112223457888 666 66 357999999988653 12222221111 23446
Q ss_pred EeeCCEEEEEecC--CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC---CcEEE
Q 019103 242 EFIKGEVWANVWQ--TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW---PKLYE 316 (346)
Q Consensus 242 E~~~G~LyaNv~~--sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W---p~l~e 316 (346)
.+.++++++..-. ...|.++|+. |+.+..+.++ ......+++++|++++++++.... +.+|.
T Consensus 326 ~~~~~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~------------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDATSEVRVATLK-GKPVRTVQLP------------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp EEETTEEEEEEEETTEEEEEEEETT-CCEEEECCCS------------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred EEECCEEEEEEEECCEEEEEEEeCC-CCeeEEecCC------------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 6678888776543 3458888875 5555555432 122456778888888888775444 34555
Q ss_pred EEE
Q 019103 317 INL 319 (346)
Q Consensus 317 v~l 319 (346)
..+
T Consensus 393 ~d~ 395 (695)
T 2bkl_A 393 TSV 395 (695)
T ss_dssp EET
T ss_pred EEC
Confidence 543
No 288
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.00019 Score=74.87 Aligned_cols=212 Identities=11% Similarity=-0.025 Sum_probs=123.3
Q ss_pred eEEEEEEecCCCCcceeEEEecC--CEEEEEcCCCCCCeEEEEECCCCcEEEEecc---CCCeeEEEEEEeC-CEEEEEE
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAEN--DTLFESTGLYGRSSVRRVALETGKVEAINQM---EGSYFGEGLTLLG-EKLFQVT 166 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d--~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~~~~FgeGit~~g-~~LY~lt 166 (346)
.+.+.++.. ...-...+.++++ +.++.+++ .+..|++||+.+++......+ ........+.+.+ +.++++.
T Consensus 43 ~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 43 HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp EEEEEEECC-CSSCEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred CccceeccC-CcCceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE
Confidence 345555542 2333479999876 77777777 456999999999973333322 2333333333341 3344555
Q ss_pred eeCCEEEEEECCCCcEEEEEec---C-CCceeEEee-------------CCCEEEEECCCCeEEEEeCCCCcEEEEEEe-
Q 019103 167 WLQKTGFIYDQNNLNKLEEFTH---Q-MKDGWGLAT-------------DGKVLFGSDGSSMLYQIDPQTLKVIRKDIV- 228 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~i~ti~~---~-~peGwGLt~-------------Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V- 228 (346)
-.++.+.++|..+......+.. . .-....+++ |++.++++..++.|.++|..+.+....+..
T Consensus 120 s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp ETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred eCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence 5789999999987744333322 1 112233445 578888877788999999877643322221
Q ss_pred -ccCCeeeeeceeeEee-C---CEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCE
Q 019103 229 -RYKGREVRNLNELEFI-K---GEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNR 303 (346)
Q Consensus 229 -~~~G~pv~~lNELE~~-~---G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 303 (346)
..+..++ +.+.+. + |..++....++.|.+.|..+++......+... ........+++|+|+++.
T Consensus 200 ~~~h~~~V---~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~--------~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 200 LEGHSDWV---RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKE--------EKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp ECCCSSCE---EEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSS--------SCCSSCCCCEEECTTTCC
T ss_pred ecCCCCcE---EEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEecc--------CCCCCceEEEEEcCCCCE
Confidence 1122233 335554 3 67777777788899999988742111100000 012345678999999887
Q ss_pred EEEecCCCCcEEEEEE
Q 019103 304 IFVTGKLWPKLYEINL 319 (346)
Q Consensus 304 LfVTGK~Wp~l~ev~l 319 (346)
+++++. .+.|+--++
T Consensus 269 l~s~s~-Dg~I~vwd~ 283 (753)
T 3jro_A 269 LALSGG-DNKVTLWKE 283 (753)
T ss_dssp EEEECS-SSCEECCBC
T ss_pred EEEEcC-CCEEEEEec
Confidence 766554 455544433
No 289
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.93 E-value=0.0026 Score=57.99 Aligned_cols=148 Identities=9% Similarity=-0.082 Sum_probs=100.0
Q ss_pred CEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee----CCEEEEEECCCCcE--EEEEecC
Q 019103 116 DTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL----QKTGFIYDQNNLNK--LEEFTHQ 189 (346)
Q Consensus 116 ~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~----~~~v~V~D~~tl~~--i~ti~~~ 189 (346)
+.||+-.|..+.+.+.+||+.+++-...-.++....+.+++..+++||+.--. .+.+++||+.+.+- +..++.+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 46776666555789999999999876666666655667788889999998543 48899999987654 3334433
Q ss_pred CCceeEEeeCCCEEEEECC-------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecC--------
Q 019103 190 MKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQ-------- 254 (346)
Q Consensus 190 ~peGwGLt~Dg~~LyvSdG-------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~-------- 254 (346)
..+.+.+.-++.||+.-| .+.++++|+.+.+-... .....+.... .+...+++||+--..
T Consensus 92 -r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 92 -RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK---PSMLTQRCSH-GMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp -CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE---CCCSSCCBSC-EEEEETTEEEEECCEESCTTTCE
T ss_pred -ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC---CCCcCCccee-EEEEECCEEEEECCCCCCCCccc
Confidence 355555555778888543 46799999999876432 2211122111 234568888874321
Q ss_pred -CCeEEEEeCCCCeE
Q 019103 255 -TDCIARISHEDGVV 268 (346)
Q Consensus 255 -sn~I~vID~~TG~V 268 (346)
.+.+.+.|+++++-
T Consensus 167 ~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 167 VLNSCEVYDPATETW 181 (306)
T ss_dssp ECCCEEEEETTTTEE
T ss_pred ccceEEEeCCCCCeE
Confidence 67899999999963
No 290
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.92 E-value=0.0017 Score=59.19 Aligned_cols=162 Identities=15% Similarity=0.061 Sum_probs=98.3
Q ss_pred CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeC----CEEEEEECCCCcEEEEEecCCCceeEEeeCCCE
Q 019103 127 RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ----KTGFIYDQNNLNKLEEFTHQMKDGWGLATDGKV 202 (346)
Q Consensus 127 ~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~----~~v~V~D~~tl~~i~ti~~~~peGwGLt~Dg~~ 202 (346)
.+.|.++|+++|+...- .....-.++++|++|+.+.... ..++++|.++.+...-...+.......+|||++
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~ 117 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRK 117 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSE
T ss_pred cceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCE
Confidence 56899999999985432 2333334566788887776653 359999998877655444321244557889998
Q ss_pred EEEE-C-------------------C-------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecC
Q 019103 203 LFGS-D-------------------G-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQ 254 (346)
Q Consensus 203 LyvS-d-------------------G-------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~ 254 (346)
|+.+ + | ...|+++|+++.+.+..+.. . ....+.+. ||.+|+....
T Consensus 118 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~------~~~~~~~spdg~~~~~~~~ 190 (347)
T 2gop_A 118 LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P------RFSSGIWHRDKIVVNVPHR 190 (347)
T ss_dssp EEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E------TTCEEEEETTEEEEEEECC
T ss_pred EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C------CcccccCCCCeEEEEEecc
Confidence 7664 2 1 46899999999887555544 1 12234444 5544555432
Q ss_pred --------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC-------CCcEEEEE
Q 019103 255 --------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL-------WPKLYEIN 318 (346)
Q Consensus 255 --------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~-------Wp~l~ev~ 318 (346)
...|.++| +|++..... . . .. . +++|+|++|+.++.. ...||.+.
T Consensus 191 ~~~~~~~~~~~l~~~d--~~~~~~l~~--~-~-----------~~-~--~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWE--DGKEEKMFE--K-V-----------SF-Y--AVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp CSSCCSSCCEEEEEEE--TTEEEEEEE--E-E-----------SE-E--EEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred cccccccccccEEEeC--CCceEEecc--C-c-----------ce-e--eECCCCCEEEEEEccccCCccccceEEEEC
Confidence 34789999 777543221 1 0 01 1 228888877655432 34677664
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.89 E-value=0.0025 Score=57.86 Aligned_cols=168 Identities=14% Similarity=0.107 Sum_probs=107.8
Q ss_pred eEEEEEEecCCCCcceeEEEecCCEEEEEcCCCC---CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee-
Q 019103 93 IQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL- 168 (346)
Q Consensus 93 ~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg---~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~- 168 (346)
.+.+...|..... .+.+.. +++||+-.|..+ .+.+.++|+.+++-...-+++....+.+++..+++||+.--.
T Consensus 93 W~~~~~~p~~r~~--~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 93 WYSVAPMNVRRGL--AGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CEEECCCSSCCBS--CEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBC
T ss_pred eEECCCCCCCccc--eeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCC
Confidence 4444445543222 345554 689999877544 357999999999876666666555667788889999998432
Q ss_pred ----CCEEEEEECCCCcEEE--EEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeee
Q 019103 169 ----QKTGFIYDQNNLNKLE--EFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVR 236 (346)
Q Consensus 169 ----~~~v~V~D~~tl~~i~--ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~ 236 (346)
.+.+++||+.+.+-.. ..+.+ ..+.++...+++||+.-| .+.++++|+++.+-..- .....+..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~ 245 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATK-RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV---TSMTTPRC 245 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE---CCCSSCCB
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcc-cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC---CCCCCccc
Confidence 4779999987765433 33333 345555555778888654 46899999999876432 22111211
Q ss_pred eceeeEeeCCEEEEEecCC-----CeEEEEeCCCCeE
Q 019103 237 NLNELEFIKGEVWANVWQT-----DCIARISHEDGVV 268 (346)
Q Consensus 237 ~lNELE~~~G~LyaNv~~s-----n~I~vID~~TG~V 268 (346)
.. .+...+++||+--... +.|.+.|+++++-
T Consensus 246 ~~-~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 246 YV-GATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp SC-EEEEETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ce-eEEEECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 11 2445588888754222 5788999998863
No 292
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.001 Score=69.23 Aligned_cols=180 Identities=7% Similarity=0.044 Sum_probs=120.1
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC------CeeEEEEEEeCCEEEEEEeeCCEEEEEEC
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG------SYFGEGLTLLGEKLFQVTWLQKTGFIYDQ 177 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~------~~FgeGit~~g~~LY~ltw~~~~v~V~D~ 177 (346)
.++..+++++|||.++.+++ .+..|.+||.++ .+.... .. .+-.....++|+.|+.++. ++++-++|.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s--~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~-DGtVkIWd~ 158 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLS--NNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE-DGELQFFSI 158 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEE--TTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET-TSEEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEe--CCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC-CCEEEEEEC
Confidence 67778999999998777777 456899999655 445444 33 2333344456777777654 799999999
Q ss_pred CCCc-------EEEEEecCC--Ccee----EEeeCCCEEEEECCCCeEEEEeCCCCcE---EEEEEeccCCeeeeeceee
Q 019103 178 NNLN-------KLEEFTHQM--KDGW----GLATDGKVLFGSDGSSMLYQIDPQTLKV---IRKDIVRYKGREVRNLNEL 241 (346)
Q Consensus 178 ~tl~-------~i~ti~~~~--peGw----GLt~Dg~~LyvSdGs~~l~vIDp~T~kv---i~~I~V~~~G~pv~~lNEL 241 (346)
++.+ .+.++.... -.+| +.+||| |.++-.+++|+++|.++.+. ..++.=+. . ..+..+
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h---~-~~V~sv 232 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNAS---R-RKITDL 232 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCC---S-SCCCCE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccc---c-CcEEEE
Confidence 9876 367775321 1233 457888 66666789999999988773 23442111 1 234467
Q ss_pred EeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEE--eCCCCEEEEecCC
Q 019103 242 EFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAW--DSNRNRIFVTGKL 310 (346)
Q Consensus 242 E~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~--d~~~~~LfVTGK~ 310 (346)
.+.+++|-++. .+.|.+.|..+++....- . + ..+..++|++ +|++..+.++++.
T Consensus 233 aFsg~~LASa~--~~tIkLWd~~~~~~~~~~-~-g-----------h~~~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 233 KIVDYKVVLTC--PGYVHKIDLKNYSISSLK-T-G-----------SLENFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp EEETTEEEEEC--SSEEEEEETTTTEEEEEE-C-S-----------CCSCCCEEEETTCSSCEEEEECSSC
T ss_pred EEECCEEEEEe--CCeEEEEECCCCeEEEEE-c-C-----------CCceEEEEEeeeCCCCCEEEEEcCC
Confidence 77755555554 589999999999874222 1 1 1235678999 9998888888644
No 293
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.85 E-value=0.001 Score=69.00 Aligned_cols=190 Identities=15% Similarity=0.129 Sum_probs=106.4
Q ss_pred eeEEEecCCE-EEEEcCCCCC--CeEEEEECCCCcEEEEeccCCCee-EEEEEEeCCEEEEEEeeC-------------C
Q 019103 108 QGLLYAENDT-LFESTGLYGR--SSVRRVALETGKVEAINQMEGSYF-GEGLTLLGEKLFQVTWLQ-------------K 170 (346)
Q Consensus 108 qGL~~~~d~~-LyeStGlyg~--s~V~~iDl~Tgkv~~~~~l~~~~F-geGit~~g~~LY~ltw~~-------------~ 170 (346)
.++.++|||+ |..+....|. ..|+++|+++|+.+... ++...| +...+.+ +.||...... .
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCC
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCC
Confidence 5788999994 3333222243 58999999999986542 221111 2223445 6777766433 3
Q ss_pred EEEEEECCCCcEEEEEecC---CC---ceeEEeeCCCEEEE-E-CC---CCeEEEEeCCCCcE--EEEEEeccCCeeeee
Q 019103 171 TGFIYDQNNLNKLEEFTHQ---MK---DGWGLATDGKVLFG-S-DG---SSMLYQIDPQTLKV--IRKDIVRYKGREVRN 237 (346)
Q Consensus 171 ~v~V~D~~tl~~i~ti~~~---~p---eGwGLt~Dg~~Lyv-S-dG---s~~l~vIDp~T~kv--i~~I~V~~~G~pv~~ 237 (346)
++++.|..+.+...+.-++ .+ .+..+++||++|++ + ++ .+.|+++|.++.+. ..++....++.. .
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~- 321 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-D- 321 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-E-
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-E-
Confidence 5999998877632222111 11 24557899998766 3 23 56999999887621 344443332211 1
Q ss_pred ceeeEeeCCEEEEE-ecC--CCeEEEEeCCCC--eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC-
Q 019103 238 LNELEFIKGEVWAN-VWQ--TDCIARISHEDG--VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW- 311 (346)
Q Consensus 238 lNELE~~~G~LyaN-v~~--sn~I~vID~~TG--~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W- 311 (346)
-+...+++||.. +.. ...|.++|.+++ +....+.- ...++.+++++ ++.++++...-
T Consensus 322 --~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~-------------~~~~l~~~~~~--~~~lv~~~~~dg 384 (741)
T 1yr2_A 322 --FVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE-------------SKDNLESVGIA--GNRLFASYIHDA 384 (741)
T ss_dssp --EEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC-------------CSSEEEEEEEE--BTEEEEEEEETT
T ss_pred --EEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC-------------CCCeEEEEEEE--CCEEEEEEEECC
Confidence 133456677754 322 346999999985 33222211 12367788887 45566554322
Q ss_pred -CcEEEEE
Q 019103 312 -PKLYEIN 318 (346)
Q Consensus 312 -p~l~ev~ 318 (346)
..|+.+.
T Consensus 385 ~~~l~~~~ 392 (741)
T 1yr2_A 385 KSQVLAFD 392 (741)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 3445444
No 294
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.85 E-value=0.0018 Score=58.92 Aligned_cols=168 Identities=17% Similarity=0.182 Sum_probs=108.3
Q ss_pred eeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCC---CeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee
Q 019103 92 TIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGR---SSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL 168 (346)
Q Consensus 92 t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~---s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~ 168 (346)
+.+.+...|..... .+.+.. +++||+-.|..+. +.+.++|+.+++-...-+++....+.+++..+++||+.--.
T Consensus 88 ~W~~~~~~p~~r~~--~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 88 QWTSVANMRDRRST--LGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp EEEEECCCSSCCBS--CEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCE
T ss_pred ceeeCCCCCccccc--eEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCC
Confidence 34444445543333 355555 5899988774332 47889999999877766676666667788889999998422
Q ss_pred -------CCEEEEEECCCCcE--EEEEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCe
Q 019103 169 -------QKTGFIYDQNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGR 233 (346)
Q Consensus 169 -------~~~v~V~D~~tl~~--i~ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~ 233 (346)
.+.+++||+.+.+- +...+.+ ..+.+++.-++.||+.-| .+.++++|+++.+-.. +.....
T Consensus 165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~~~ 240 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATTNEWTYIAEMSTR-RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ---VADMNM 240 (302)
T ss_dssp ETTTTEECCCEEEEETTTTEEEEECCCSSC-CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE---ECCCSS
T ss_pred CCCCCccccEEEEEeCCCCcEEECCCCccc-cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee---CCCCCC
Confidence 46799999987644 3334433 345555555778888644 4689999999987653 222111
Q ss_pred eeeeceeeEeeCCEEEEEec-----CCCeEEEEeCCCCe
Q 019103 234 EVRNLNELEFIKGEVWANVW-----QTDCIARISHEDGV 267 (346)
Q Consensus 234 pv~~lNELE~~~G~LyaNv~-----~sn~I~vID~~TG~ 267 (346)
+.... .+...+++||+--. ..++|.+.|+++.+
T Consensus 241 ~r~~~-~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 241 CRRNA-GVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBSC-EEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ccccC-eEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 21111 14456888887432 24679999999986
No 295
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.84 E-value=0.0066 Score=58.97 Aligned_cols=202 Identities=17% Similarity=0.244 Sum_probs=115.4
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC-----CCeeEEEEEEe-----CCEEEEEE--eeCCEEEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQME-----GSYFGEGLTLL-----GEKLFQVT--WLQKTGFIY 175 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~-----~~~FgeGit~~-----g~~LY~lt--w~~~~v~V~ 175 (346)
.||++.+||+||++.- +..+|.+++.++|+......++ ...-..||+++ ++.||+.- ...++|..+
T Consensus 35 ~~ia~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 35 WGLAPLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp EEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred eEEEEcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 5999999999999853 3459999998888764332222 11112457775 57899862 346788888
Q ss_pred ECCC----------CcE-EEEEecC---CCceeEEeeCCCEEEEECC--------------CCeEEEEeCCCCcEE----
Q 019103 176 DQNN----------LNK-LEEFTHQ---MKDGWGLATDGKVLFGSDG--------------SSMLYQIDPQTLKVI---- 223 (346)
Q Consensus 176 D~~t----------l~~-i~ti~~~---~peGwGLt~Dg~~LyvSdG--------------s~~l~vIDp~T~kvi---- 223 (346)
.... .+. +..++.. .+....+.+|| +||++-| ..+|.-||+... +-
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~-ip~~nP 190 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE-PAPGNP 190 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS-BCTTCS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCC-ccCCCC
Confidence 6543 122 2234432 12335567787 6999864 357788887532 10
Q ss_pred ---EEEEeccCCeeeeeceeeEee-CCEEEEEecCC---CeEEEEeCCCCeEEEEEECCchh--hhhh--hccC-CCCce
Q 019103 224 ---RKDIVRYKGREVRNLNELEFI-KGEVWANVWQT---DCIARISHEDGVVLGWVLLPNLR--ERLV--AAGY-NGIDV 291 (346)
Q Consensus 224 ---~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~s---n~I~vID~~TG~Vv~~I~l~~l~--~~~~--~~~~-~~~~v 291 (346)
.+|-. .| +.+.+.|.+. +|+||++.-.. ++|.+|-+ |.--+|=...... +... ...+ +...-
T Consensus 191 f~~~~i~a--~G--~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~--G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~a 264 (347)
T 3das_A 191 FPGSPVYS--YG--HRNVQGLAWDDKQRLFASEFGQDTWDELNAIKP--GDNYGWPEAEGKGGGSGFHDPVAQWSTDEAS 264 (347)
T ss_dssp STTCCEEE--BC--CSBCCEEEECTTCCEEEEECCSSSCEEEEEECT--TCBCCTTTCCSSCCCTTCCCCSEEECTTTCC
T ss_pred CCCCeEEe--eC--CCCcceEEECCCCCEEEEecCCCCCceeeEEcC--CCEecCCcccCCCCCccccCCcEecCCCCCC
Confidence 01111 11 1244556666 68999876544 45666632 3211111000000 0000 0000 11236
Q ss_pred eeEEEEeCCCCEEEEecCCCCcEEEEEEee
Q 019103 292 LNGIAWDSNRNRIFVTGKLWPKLYEINLRE 321 (346)
Q Consensus 292 lNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~ 321 (346)
|.||+|. +..+|++.-.-.+|+.|.|..
T Consensus 265 p~G~~~~--~g~~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 265 PSGIAYA--EGSVWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp EEEEEEE--TTEEEEEESTTCSEEEEEEET
T ss_pred CcceEEE--cCceeeccccCCEEEEEEecC
Confidence 8999998 468999988888999999865
No 296
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.82 E-value=0.0024 Score=58.62 Aligned_cols=182 Identities=14% Similarity=0.144 Sum_probs=114.4
Q ss_pred eEEEecCCEEEEEcCC----CC---CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe-----eCCEEEEEE
Q 019103 109 GLLYAENDTLFESTGL----YG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW-----LQKTGFIYD 176 (346)
Q Consensus 109 GL~~~~d~~LyeStGl----yg---~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw-----~~~~v~V~D 176 (346)
+++.. ++.||+-.|. .+ .+.+.++|+.+++-....+++....+.+++..+++||+.-- ..+.+++||
T Consensus 65 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 65 AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEE
T ss_pred eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEEC
Confidence 55554 6899988774 11 25799999999987666666655556677888999999832 246799999
Q ss_pred CCCCcEEE--EEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEE
Q 019103 177 QNNLNKLE--EFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (346)
Q Consensus 177 ~~tl~~i~--ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~L 248 (346)
+.+.+-.. .++.+ ..+-+.+..++.||+.=| .+.++++|+.+.+-.. +.....+.... .+...+++|
T Consensus 144 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~-~~~~~~~~i 218 (308)
T 1zgk_A 144 PERDEWHLVAPMLTR-RIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM---ITAMNTIRSGA-GVCVLHNCI 218 (308)
T ss_dssp TTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE---CCCCSSCCBSC-EEEEETTEE
T ss_pred CCCCeEeECCCCCcc-ccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee---CCCCCCccccc-eEEEECCEE
Confidence 98765433 33333 345555555778888643 4689999999987642 22211222211 234558898
Q ss_pred EEEecC-----CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCC
Q 019103 249 WANVWQ-----TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKL 310 (346)
Q Consensus 249 yaNv~~-----sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~ 310 (346)
|+--.. .+.+.+.|+++.+ |..+..+.. ...-.+++.. +++|||.|..
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~---------~r~~~~~~~~--~~~i~v~GG~ 271 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETET---WTFVAPMKH---------RRSALGITVH--QGRIYVLGGY 271 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTE---EEECCCCSS---------CCBSCEEEEE--TTEEEEECCB
T ss_pred EEEeCCCCCCccceEEEEeCCCCc---EEECCCCCC---------CccceEEEEE--CCEEEEEcCc
Confidence 874322 4789999999986 444433221 0111234443 4689988864
No 297
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.82 E-value=0.00058 Score=70.17 Aligned_cols=183 Identities=11% Similarity=0.008 Sum_probs=105.6
Q ss_pred ceeEEEecCCE-E-EEEc-CCCCCCeEEEEECCCCcEEEEeccCCCe-eEEEEEEeCCEEEEEEee------------CC
Q 019103 107 TQGLLYAENDT-L-FEST-GLYGRSSVRRVALETGKVEAINQMEGSY-FGEGLTLLGEKLFQVTWL------------QK 170 (346)
Q Consensus 107 TqGL~~~~d~~-L-yeSt-Glyg~s~V~~iDl~Tgkv~~~~~l~~~~-FgeGit~~g~~LY~ltw~------------~~ 170 (346)
..++.++|||+ | |.+. +..+...|+++|+++|+.+....++... .+...+.+|+.||..... ..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 36789999995 3 3322 2123479999999999875111233222 233345567777776653 45
Q ss_pred EEEEEECCCCcE----EEEEecC--CCceeEEeeCCCEEEE-EC-C--CCeEEEEeCCCCcEEEEEEeccCCeeeeecee
Q 019103 171 TGFIYDQNNLNK----LEEFTHQ--MKDGWGLATDGKVLFG-SD-G--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNE 240 (346)
Q Consensus 171 ~v~V~D~~tl~~----i~ti~~~--~peGwGLt~Dg~~Lyv-Sd-G--s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNE 240 (346)
.+++.|..+.+. +.+.+-. .-.+..+++||++|++ ++ + .++|+++|..+.+.. ++.....+. .. -
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~-~~---~ 277 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAK-YE---V 277 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCC-EE---E
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCce-EE---E
Confidence 699999988763 2222111 1135668999998866 32 3 459999998766543 344332211 11 1
Q ss_pred eEeeCCEEEE-EecC--CCeEEEEeCCCCeE---EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 241 LEFIKGEVWA-NVWQ--TDCIARISHEDGVV---LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 241 LE~~~G~Lya-Nv~~--sn~I~vID~~TG~V---v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
+ +.+|.+|+ +++. ...|.++|.++++. ...+.- .....+.+++++ ++.++++..
T Consensus 278 ~-~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~------------~~~~~l~~~~~~--~~~lv~~~~ 337 (695)
T 2bkl_A 278 H-AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE------------DSSASLLSVSIV--GGHLSLEYL 337 (695)
T ss_dssp E-EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC------------CSSCEEEEEEEE--TTEEEEEEE
T ss_pred E-ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC------------CCCCeEEEEEEE--CCEEEEEEE
Confidence 2 23554664 5543 46799999988753 222210 113467889998 455665543
No 298
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.79 E-value=0.0028 Score=65.49 Aligned_cols=193 Identities=16% Similarity=0.138 Sum_probs=116.2
Q ss_pred eeEEEecCC-EEEEEcCC----------CCCCeEEEEECCCCcE----EEEecc--CCCeeEEEEEEeCCEEEEEEee--
Q 019103 108 QGLLYAEND-TLFESTGL----------YGRSSVRRVALETGKV----EAINQM--EGSYFGEGLTLLGEKLFQVTWL-- 168 (346)
Q Consensus 108 qGL~~~~d~-~LyeStGl----------yg~s~V~~iDl~Tgkv----~~~~~l--~~~~FgeGit~~g~~LY~ltw~-- 168 (346)
.++.++ || .||.++.. .....|.++++.|+.. +..-+- +...++...+.+|+.|++....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 477888 77 56665542 2346799999988752 222111 1223455566678888776543
Q ss_pred -CCEEEEEECCCCc-EEEEEecC-CCceeEEeeCCCEEEE-ECC---CCeEEEEeCCCCcE--EEEEEeccCCeeeeece
Q 019103 169 -QKTGFIYDQNNLN-KLEEFTHQ-MKDGWGLATDGKVLFG-SDG---SSMLYQIDPQTLKV--IRKDIVRYKGREVRNLN 239 (346)
Q Consensus 169 -~~~v~V~D~~tl~-~i~ti~~~-~peGwGLt~Dg~~Lyv-SdG---s~~l~vIDp~T~kv--i~~I~V~~~G~pv~~lN 239 (346)
.+.++++|.++.. ...++... ..+-..+++||++||+ +|. ..+|+.+|.++.+. ...+.-... . .+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~---~~- 331 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-Q---VL- 331 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-S---CE-
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-C---EE-
Confidence 3699999987663 34445432 1122237889988876 663 46899999988654 123322221 1 22
Q ss_pred eeEeeCCEEEEEecCC--CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCC---CcE
Q 019103 240 ELEFIKGEVWANVWQT--DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLW---PKL 314 (346)
Q Consensus 240 ELE~~~G~LyaNv~~s--n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~W---p~l 314 (346)
.+...+++|++..... ..|.++|.+++. ...+.+++ .....++++++++++++++...+ +.+
T Consensus 332 ~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~------------~~~~~~~~~~~d~~~l~~~~ss~~tP~~l 398 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPG------------LGSVSGFNGKHDDPALYFGFENYAQPPTL 398 (693)
T ss_dssp EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSS------------SSEEEECCCCTTCSCEEEEEECSSSCCEE
T ss_pred EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCC------------CceEEeeecCCCCCEEEEEecCCCCCCEE
Confidence 4666777877654332 378999998554 45664422 12345677788888888775443 667
Q ss_pred EEEEE
Q 019103 315 YEINL 319 (346)
Q Consensus 315 ~ev~l 319 (346)
|.+.+
T Consensus 399 ~~~d~ 403 (693)
T 3iuj_A 399 YRFEP 403 (693)
T ss_dssp EEECT
T ss_pred EEEEC
Confidence 77654
No 299
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.0055 Score=56.44 Aligned_cols=164 Identities=10% Similarity=0.011 Sum_probs=93.4
Q ss_pred EEEEEEecC-CCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCC-------cEEEEecc-CCCeeEEEEEEeC-CEEE
Q 019103 94 QVVNEFPHD-PRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETG-------KVEAINQM-EGSYFGEGLTLLG-EKLF 163 (346)
Q Consensus 94 ~Vv~t~phd-~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tg-------kv~~~~~l-~~~~FgeGit~~g-~~LY 163 (346)
+.+.++... .......+.|+|++.++.+.+ .+..|++||..++ +.+..+.- .... ..++... ++..
T Consensus 47 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V--~~v~~sp~g~~l 122 (330)
T 2hes_X 47 TLIDVLDETAHKKAIRSVAWRPHTSLLAAGS--FDSTVSIWAKEESADRTFEMDLLAIIEGHENEV--KGVAWSNDGYYL 122 (330)
T ss_dssp EEEEEECTTCCCSCEEEEEECTTSSEEEEEE--TTSCEEEEEC-------CCCEEEEEEC----CE--EEEEECTTSCEE
T ss_pred EEEEEEecCCccCCEEEEEECCCCCEEEEEe--CCCcEEEEEcccCcCccccceeEEEEcCCCCcE--EEEEECCCCCEE
Confidence 445555311 233347999999998877777 4569999998643 33333321 1222 2344432 3344
Q ss_pred EEEeeCCEEEEEECCC----CcEEEEEecC--CCceeEEeeCCCEEEEECCCCeEEEEeCCCC--cEEEEEEeccCCeee
Q 019103 164 QVTWLQKTGFIYDQNN----LNKLEEFTHQ--MKDGWGLATDGKVLFGSDGSSMLYQIDPQTL--KVIRKDIVRYKGREV 235 (346)
Q Consensus 164 ~ltw~~~~v~V~D~~t----l~~i~ti~~~--~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~--kvi~~I~V~~~G~pv 235 (346)
++.-.++.+.++|..+ .+.+.++... .-....++||++.|+.+..+++|.++|..+. +.+.++. .+..++
T Consensus 123 as~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~--~h~~~v 200 (330)
T 2hes_X 123 ATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN--GHEGTV 200 (330)
T ss_dssp EEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--CCSSCE
T ss_pred EEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc--CCCCcE
Confidence 4445689999999842 3455555421 1133456789998888777889999997665 3333322 222222
Q ss_pred eeceeeEeeC---CEEEEEecCCCeEEEEeCCCC
Q 019103 236 RNLNELEFIK---GEVWANVWQTDCIARISHEDG 266 (346)
Q Consensus 236 ~~lNELE~~~---G~LyaNv~~sn~I~vID~~TG 266 (346)
+.+.+.. +...+..-.+.+|.+-|..++
T Consensus 201 ---~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 201 ---WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ---EEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ---EEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 2344442 445555556777888777654
No 300
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.78 E-value=0.0011 Score=64.56 Aligned_cols=200 Identities=14% Similarity=0.105 Sum_probs=116.9
Q ss_pred eeEEEecC----CEEEEEcCCCCCCeEEEEECCCC----------c-EEEEeccCCCeeEEEEEEeC-CEEEEEEe----
Q 019103 108 QGLLYAEN----DTLFESTGLYGRSSVRRVALETG----------K-VEAINQMEGSYFGEGLTLLG-EKLFQVTW---- 167 (346)
Q Consensus 108 qGL~~~~d----~~LyeStGlyg~s~V~~iDl~Tg----------k-v~~~~~l~~~~FgeGit~~g-~~LY~ltw---- 167 (346)
.||+++|| +.||++-.....++|.++.+..+ + ++..++-....++-.|+... +.||+++-
T Consensus 83 lGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~ 162 (347)
T 3das_A 83 LGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGD 162 (347)
T ss_dssp EEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTC
T ss_pred eeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCC
Confidence 69999974 78998622124579999977652 1 22233434556777788854 58999863
Q ss_pred ---------eCCEEEEEECCCCc-------EEEEEecCC--CceeEEeeCCCEEEEEC-CC---CeEEEEeCCCCc----
Q 019103 168 ---------LQKTGFIYDQNNLN-------KLEEFTHQM--KDGWGLATDGKVLFGSD-GS---SMLYQIDPQTLK---- 221 (346)
Q Consensus 168 ---------~~~~v~V~D~~tl~-------~i~ti~~~~--peGwGLt~Dg~~LyvSd-Gs---~~l~vIDp~T~k---- 221 (346)
..++|+.+|++.-- ....+.++. |.|.++.++ ..||++| |. ++|..|-+-.+=
T Consensus 163 ~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~-G~L~~~d~g~~~~deln~i~~G~nyGwP~ 241 (347)
T 3das_A 163 TGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDK-QRLFASEFGQDTWDELNAIKPGDNYGWPE 241 (347)
T ss_dssp GGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTT-CCEEEEECCSSSCEEEEEECTTCBCCTTT
T ss_pred CccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCC-CCEEEEecCCCCCceeeEEcCCCEecCCc
Confidence 35899999986320 122355553 566666665 5789987 53 455555432110
Q ss_pred EEEEEEeccCCeeee-------eceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEE--EEECCchhhhhhhccCCCCcee
Q 019103 222 VIRKDIVRYKGREVR-------NLNELEFIKGEVWANVWQTDCIARISHEDGVVLG--WVLLPNLRERLVAAGYNGIDVL 292 (346)
Q Consensus 222 vi~~I~V~~~G~pv~-------~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~--~I~l~~l~~~~~~~~~~~~~vl 292 (346)
....-.-...-.|+. ...-|.+.+|.+|+.-+....|.+|..+.++.++ ..-+.+ ...-|
T Consensus 242 ~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~-----------~~gR~ 310 (347)
T 3das_A 242 AEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG-----------EYGRL 310 (347)
T ss_dssp CCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTT-----------TSSCE
T ss_pred ccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecC-----------CCCCc
Confidence 000000000000111 2234777899999999988899999887776421 111111 11257
Q ss_pred eEEEEeCCCCEEEEec-CC--------CCcEEEEEE
Q 019103 293 NGIAWDSNRNRIFVTG-KL--------WPKLYEINL 319 (346)
Q Consensus 293 NGIA~d~~~~~LfVTG-K~--------Wp~l~ev~l 319 (346)
-+|+..|||..++.|. +. .++|++|.+
T Consensus 311 ~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 311 RTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp EEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred cEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 8999999986544443 23 357888864
No 301
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.77 E-value=0.0029 Score=57.29 Aligned_cols=195 Identities=10% Similarity=0.036 Sum_probs=111.2
Q ss_pred EEEEEe-cCCCCcceeEEEec--CCEEEEEcCCCCCCeEEEEECCCCcE--EEEeccCCCeeEEEEEEeC---CEEEEEE
Q 019103 95 VVNEFP-HDPRAFTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKV--EAINQMEGSYFGEGLTLLG---EKLFQVT 166 (346)
Q Consensus 95 Vv~t~p-hd~~~FTqGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgkv--~~~~~l~~~~FgeGit~~g---~~LY~lt 166 (346)
.+.++. |. .....+.|++ ++.++.|++ .+..|++||+.+++. +........ .-..++... +.++++.
T Consensus 45 ~~~~l~gH~--~~V~~v~~s~~~~g~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~g~~l~s~ 119 (297)
T 2pm7_B 45 LIDTLTGHE--GPVWRVDWAHPKFGTILASCS--YDGKVMIWKEENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPMLLVA 119 (297)
T ss_dssp CCEEECCCS--SCEEEEEECCGGGCSEEEEEE--TTTEEEEEEBSSSCBCCCEEECCCSS-CEEEEEECCGGGCSEEEEE
T ss_pred EEEEEcccc--CCeEEEEecCCCcCCEEEEEc--CCCEEEEEEcCCCceEEEEEeecCCC-ceeEEEeCcCCCCcEEEEE
Confidence 344554 43 3346899974 367777877 456999999998852 222222111 123344432 3344555
Q ss_pred eeCCEEEEEECCCCcE--EEEEec-C-CCceeEEeeC-------------CCEEEEECCCCeEEEEeCCCCc----EEEE
Q 019103 167 WLQKTGFIYDQNNLNK--LEEFTH-Q-MKDGWGLATD-------------GKVLFGSDGSSMLYQIDPQTLK----VIRK 225 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~--i~ti~~-~-~peGwGLt~D-------------g~~LyvSdGs~~l~vIDp~T~k----vi~~ 225 (346)
-.++.+.++|..+... ...+.. . .-....++|+ ++.|..+..+++|.++|..+.+ ...+
T Consensus 120 s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~ 199 (297)
T 2pm7_B 120 SSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (297)
T ss_dssp ETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred ECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE
Confidence 5689999999876532 122221 1 0122234454 4566666567899999987755 3333
Q ss_pred EEeccCCeeeeeceeeEee-C---CEEEEEecCCCeEEEEeCCCCe--EEEEEECCchhhhhhhccCCCCceeeEEEEeC
Q 019103 226 DIVRYKGREVRNLNELEFI-K---GEVWANVWQTDCIARISHEDGV--VLGWVLLPNLRERLVAAGYNGIDVLNGIAWDS 299 (346)
Q Consensus 226 I~V~~~G~pv~~lNELE~~-~---G~LyaNv~~sn~I~vID~~TG~--Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~ 299 (346)
+. .+..+ ++.+.+. + +..+|+.-.+++|.+-|.+++. ....+ + ... .-....+.++|+|
T Consensus 200 l~--~H~~~---V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~-~-~~~--------~~~~~v~~~~~s~ 264 (297)
T 2pm7_B 200 LE--GHSDW---VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTL-L-KEE--------KFPDVLWRASWSL 264 (297)
T ss_dssp EC--CCSSC---EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEE-S-SSS--------CCSSCEEEEEECS
T ss_pred ec--CCCCc---eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceee-e-ecc--------cCCCcEEEEEECC
Confidence 32 12222 3345554 2 4777877778889999887753 11111 1 000 1123568899999
Q ss_pred CCCEEEEecC
Q 019103 300 NRNRIFVTGK 309 (346)
Q Consensus 300 ~~~~LfVTGK 309 (346)
+++.|..++.
T Consensus 265 ~g~~las~~~ 274 (297)
T 2pm7_B 265 SGNVLALSGG 274 (297)
T ss_dssp SSCCEEEEET
T ss_pred CCCEEEEEcC
Confidence 9988776654
No 302
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.77 E-value=0.00068 Score=66.34 Aligned_cols=190 Identities=9% Similarity=-0.002 Sum_probs=107.3
Q ss_pred cceeEEEecC-CEEEEEcCCCCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEE
Q 019103 106 FTQGLLYAEN-DTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKL 183 (346)
Q Consensus 106 FTqGL~~~~d-~~LyeStGlyg~s~V~~iDl~Tgkv~~~~-~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i 183 (346)
...++.++|+ +.++.+.+ .+..|++||+.+++..... ............++|+.|+... .++.+.++|.+ ++..
T Consensus 151 ~V~~v~~~p~~~~~las~s--~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCL--ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPT-LQEK 226 (434)
T ss_dssp SEEEEEECSSCTTEEEEEE--TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTT-CCEE
T ss_pred ceEEEEECCCCCCEEEEEE--CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccC-Cccc
Confidence 3478999987 57777777 4569999999999654332 2233444433444566676666 67899999998 6666
Q ss_pred EEEecC---CC----ceeEEee--CCCEEEE-ECCC------CeEEEEeCCCC------cEEEEEEecc--CCeeeeece
Q 019103 184 EEFTHQ---MK----DGWGLAT--DGKVLFG-SDGS------SMLYQIDPQTL------KVIRKDIVRY--KGREVRNLN 239 (346)
Q Consensus 184 ~ti~~~---~p----eGwGLt~--Dg~~Lyv-SdGs------~~l~vIDp~T~------kvi~~I~V~~--~G~pv~~lN 239 (346)
.+++.. .+ ....+++ ++..+.+ ++++ ..+.++|..+. ...+.+.+.. .+..-.+.
T Consensus 227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~- 305 (434)
T 2oit_A 227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHY- 305 (434)
T ss_dssp EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCE-
T ss_pred ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcce-
Confidence 666532 11 2234444 4444433 3332 24777776543 2233333311 01100111
Q ss_pred eeEee-C-CEEEEEecCCCeEEEEeCCCC--eEEEEEECCchhhhhhhccCCCCceeeEEEEeCC
Q 019103 240 ELEFI-K-GEVWANVWQTDCIARISHEDG--VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSN 300 (346)
Q Consensus 240 ELE~~-~-G~LyaNv~~sn~I~vID~~TG--~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~ 300 (346)
.+.+. + +.+|++++.+++|.+|..... ....+..-..-+..++-.....+..|-|+|+|--
T Consensus 306 ~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d~~ 370 (434)
T 2oit_A 306 YLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYT 370 (434)
T ss_dssp EEEEEGGGTEEEEEETTCSBCEEEEECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEECC
T ss_pred eeehhccCCEEEEecCCCCceeEEEecCCCCccEEEeccccccccccCCCCCCCceeeEEEEEcc
Confidence 12222 2 589999999999999986442 2333333322222222211224678999999843
No 303
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.0012 Score=66.78 Aligned_cols=190 Identities=7% Similarity=0.053 Sum_probs=114.8
Q ss_pred EEecCCCCcceeEEEecC------CEEEEEcCCCCCCeEEEEECCCCcEE-----------EEeccCCCeeEEEEEEeCC
Q 019103 98 EFPHDPRAFTQGLLYAEN------DTLFESTGLYGRSSVRRVALETGKVE-----------AINQMEGSYFGEGLTLLGE 160 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~d------~~LyeStGlyg~s~V~~iDl~Tgkv~-----------~~~~l~~~~FgeGit~~g~ 160 (346)
++.|.... ...+.|+|+ +.++.|.+ .++.|++||+.+++.. ..+..... ....++...+
T Consensus 202 ~l~~~~~~-V~~v~wsp~~~~~~~~~~LAs~s--~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~-~v~sv~~s~~ 277 (524)
T 2j04_B 202 TIVHSFGE-VWDLKWHEGCHAPHLVGCLSFVS--QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADS-LITTFDFLSP 277 (524)
T ss_dssp EEEECCCS-EEEEEECSSCCCSSSSCEEEEEE--TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTT-CEEEEEESSS
T ss_pred EEEecCCc-EEEEEECCCCCCCCCCceEEEEe--cCCeEEEEEcCCCccccccceeecCceEEEEcCCC-CEEEEEecCC
Confidence 34443333 368999886 46777777 5679999999887521 01111111 1344555433
Q ss_pred EEEEEEeeCCEEEEEECCCCc-EEEEEecCCCceeEE----eeCCCEEEE-ECCCCeEEEEeCCCCcEEEEEEeccCCee
Q 019103 161 KLFQVTWLQKTGFIYDQNNLN-KLEEFTHQMKDGWGL----ATDGKVLFG-SDGSSMLYQIDPQTLKVIRKDIVRYKGRE 234 (346)
Q Consensus 161 ~LY~ltw~~~~v~V~D~~tl~-~i~ti~~~~peGwGL----t~Dg~~Lyv-SdGs~~l~vIDp~T~kvi~~I~V~~~G~p 234 (346)
...++.-.++.|.++|.++.+ ...++......=+.+ ++||..+++ +-.+.+|.++|.++.+...++.-...+
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~-- 355 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG-- 355 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC--
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc--
Confidence 344455667999999998763 334454321222334 356634444 445889999999887765554422111
Q ss_pred eeeceeeEee-CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 235 VRNLNELEFI-KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 235 v~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
..++.+.+. +|..+|..-..++|.+.|..+++.+.++.- + ....+.|||+|+++.|...
T Consensus 356 -~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g---------H----~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 356 -SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS---------R----ETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp -CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE---------C----SSCEEEEECCSSCCBCEEE
T ss_pred -CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec---------C----CCceEEEEeCCCCCeEEEE
Confidence 123345666 466677766688899999999987665521 1 1245789999998865543
No 304
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.76 E-value=0.0045 Score=58.49 Aligned_cols=180 Identities=7% Similarity=-0.001 Sum_probs=115.0
Q ss_pred eEEEecCC-EEEEEc-CCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 109 GLLYAEND-TLFEST-GLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 109 GL~~~~d~-~LyeSt-Glyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
|..+++++ .||.+. -..+...|.+++++......-..-.. +.+.++++.||-.+-....+++.+.+..... ++
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l 182 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LF 182 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EE
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EE
Confidence 55666544 788775 12367899999998654322222221 3468899999977666789999998766543 44
Q ss_pred ecCCCceeEEeeCCCEEEEECC--CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEec-CCCeEEEEeC
Q 019103 187 THQMKDGWGLATDGKVLFGSDG--SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW-QTDCIARISH 263 (346)
Q Consensus 187 ~~~~peGwGLt~Dg~~LyvSdG--s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~-~sn~I~vID~ 263 (346)
--+ +....+.|++++||.++. ...|+.+|+...... +-+ ....| .+.+.+++||-+.. ..+.|.+++.
T Consensus 183 ~~~-~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~--~Lt-~~~~~-----~~~~~g~~Iy~~~~~~~~~i~~~~~ 253 (302)
T 3s25_A 183 YDC-NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPV--VLT-EANIE-----HYNVYGSLIFYQRGGDNPALCVVKN 253 (302)
T ss_dssp ECS-CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCE--ECS-CSCEE-----EEEEETTEEEEEECSSSCEEEEEET
T ss_pred eCC-CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeE--EEe-CCCcc-----eEEECCCEEEEEECCCCcEEEEEEC
Confidence 222 233346789999999873 358999998875532 222 22122 36777889986543 3567888877
Q ss_pred CCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEe
Q 019103 264 EDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLR 320 (346)
Q Consensus 264 ~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~ 320 (346)
+- ....+|.. .. +.++++.++.+|-|.-.-..||++++.
T Consensus 254 DG-~~r~~l~~--------------~~---~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 254 DG-TGFKELAK--------------GE---FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp TS-CCCEEEEE--------------SC---EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred CC-CccEEeeC--------------Cc---cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 43 32334421 11 224566789999997666789988754
No 305
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.74 E-value=0.0034 Score=65.49 Aligned_cols=188 Identities=14% Similarity=0.119 Sum_probs=114.4
Q ss_pred cceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCcEEEEec----cCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCC
Q 019103 106 FTQGLLYAENDT-LFESTGLYGRSSVRRVALETGKVEAINQ----MEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNN 179 (346)
Q Consensus 106 FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgkv~~~~~----l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~t 179 (346)
....|..+.+|. ||++|- + ..|.++|.+++++..-.. ++. .....+..+ .+.||+.+. +-++++|+++
T Consensus 407 ~v~~i~~d~~g~~lWigt~--~-~Gl~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~ 480 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTH--A-GGLSILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL--SALVRFNPEQ 480 (795)
T ss_dssp CEEEEEEETTTTEEEEEET--T-TEEEEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES--SCEEEEETTT
T ss_pred cEEEEEEcCCCCEEEEEeC--c-CceeEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec--CceeEEeCCC
Confidence 346788888888 999974 2 379999999998755432 221 123345555 478999997 5689999988
Q ss_pred CcEEEEEecC-----C--CceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEe--ccCCeeeeeceeeEe-eCCEE
Q 019103 180 LNKLEEFTHQ-----M--KDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIV--RYKGREVRNLNELEF-IKGEV 248 (346)
Q Consensus 180 l~~i~ti~~~-----~--peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V--~~~G~pv~~lNELE~-~~G~L 248 (346)
.+.. .+... . ..=..+..| .+.||++.. +-|+.+|+++.+. .+.. ...+.+-..++.+.. .+|.|
T Consensus 481 ~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~l 556 (795)
T 4a2l_A 481 RSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGII 556 (795)
T ss_dssp TEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCE
T ss_pred CeEE-EccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCE
Confidence 6543 23211 0 112345444 346887554 6799999988765 3321 111222223334433 37899
Q ss_pred EEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 249 WANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 249 yaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
|+.-. +-|.++|++++++.. +.. .. +.+ .+..++|+.|++|+ ||+++. .-|+.+.
T Consensus 557 WigT~--~Gl~~~d~~~~~~~~-~~~---~~-----gl~-~~~i~~i~~d~~g~-lWi~t~--~Gl~~~~ 611 (795)
T 4a2l_A 557 WVGTR--EGFYCFNEKDKQIKR-YNT---TN-----GLP-NNVVYGILEDSFGR-LWLSTN--RGISCFN 611 (795)
T ss_dssp EEEES--SCEEEEETTTTEEEE-ECG---GG-----TCS-CSCEEEEEECTTSC-EEEEET--TEEEEEE
T ss_pred EEEeC--CCceeECCCCCcEEE-eCC---CC-----CCc-hhheEEEEECCCCC-EEEEcC--CceEEEc
Confidence 98764 379999999997643 321 11 122 23458899998765 666553 3565543
No 306
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.72 E-value=0.001 Score=68.87 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=72.5
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeE-----EEEEEeCCEEEEEEee--------CCEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFG-----EGLTLLGEKLFQVTWL--------QKTGF 173 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~Fg-----eGit~~g~~LY~ltw~--------~~~v~ 173 (346)
..+.+++||+++.+. +..|..||++||+....+.-.. ..+. -.++++|++|...... .+.++
T Consensus 20 ~~~~w~~dg~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCEEECSSSEEEEEE----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccEECCCCcEEEEc----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 478999999877664 3499999999998655443221 1111 2356678877665432 16788
Q ss_pred EEECCCCcEEEEEecC-CCceeEEeeCCCEE-EEECCCCeEEEEeCCCCcEE
Q 019103 174 IYDQNNLNKLEEFTHQ-MKDGWGLATDGKVL-FGSDGSSMLYQIDPQTLKVI 223 (346)
Q Consensus 174 V~D~~tl~~i~ti~~~-~peGwGLt~Dg~~L-yvSdGs~~l~vIDp~T~kvi 223 (346)
++|.++.+...-.... .-.-..++|||++| |++| +.|+++|.++.+..
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN--NDIYVKIEPNLPSY 145 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET--TEEEEESSTTSCCE
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC--CeEEEEECCCCceE
Confidence 9999998754322211 11233579999865 5565 68999999988754
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.68 E-value=0.0028 Score=58.26 Aligned_cols=155 Identities=15% Similarity=0.166 Sum_probs=103.0
Q ss_pred eEEEecCCEEEEEcCCCC---CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee-----CCEEEEEECCCC
Q 019103 109 GLLYAENDTLFESTGLYG---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL-----QKTGFIYDQNNL 180 (346)
Q Consensus 109 GL~~~~d~~LyeStGlyg---~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~-----~~~v~V~D~~tl 180 (346)
+++.. +++||+-.|..+ .+.+.++|+.+++-...-+++....+.+++..+++||+.--. .+.+++||+.+.
T Consensus 116 ~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 116 GVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp EEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 45554 689999877433 357999999999877666676666677788889999998432 477999999876
Q ss_pred cEEE--EEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEe
Q 019103 181 NKLE--EFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (346)
Q Consensus 181 ~~i~--ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv 252 (346)
+-.. ..+.+ ..+.+.+..++.||+--| .+.++++|+++.+-.. +.....+.... .+...+++||+--
T Consensus 195 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~r~~~-~~~~~~~~i~v~G 269 (308)
T 1zgk_A 195 EWRMITAMNTI-RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTF---VAPMKHRRSAL-GITVHQGRIYVLG 269 (308)
T ss_dssp EEEECCCCSSC-CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE---CCCCSSCCBSC-EEEEETTEEEEEC
T ss_pred eEeeCCCCCCc-cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEE---CCCCCCCccce-EEEEECCEEEEEc
Confidence 5433 33333 344455555778888654 3789999999987642 22211121111 2445588888743
Q ss_pred c-----CCCeEEEEeCCCCeEE
Q 019103 253 W-----QTDCIARISHEDGVVL 269 (346)
Q Consensus 253 ~-----~sn~I~vID~~TG~Vv 269 (346)
. ..++|.+.|+++.+-.
T Consensus 270 G~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTEEE
T ss_pred CcCCCcccceEEEEcCCCCEEe
Confidence 2 2578999999998643
No 308
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.59 E-value=0.0027 Score=58.54 Aligned_cols=157 Identities=16% Similarity=0.149 Sum_probs=102.9
Q ss_pred eeEEEecCCEEEEEcCCC--C---CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee------CCEEEEEE
Q 019103 108 QGLLYAENDTLFESTGLY--G---RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL------QKTGFIYD 176 (346)
Q Consensus 108 qGL~~~~d~~LyeStGly--g---~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~------~~~v~V~D 176 (346)
.+++.. +++||+-.|.. + .+.+.++|+.+++-...-+++...++.+++..+++||+.--. .+.+++||
T Consensus 103 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 103 FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 355555 58999887742 1 257999999999877766777767788888899999997532 46799999
Q ss_pred CCCCcE--EEEEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEE
Q 019103 177 QNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (346)
Q Consensus 177 ~~tl~~--i~ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~L 248 (346)
+.+.+- +...+.+ ..+.+.+.-++.||+.-| .+.++++|+++.+-.. +.....+.... .+...+++|
T Consensus 182 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~-~~~~~~~~i 256 (318)
T 2woz_A 182 PKKGDWKDLAPMKTP-RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV---MTEFPQERSSI-SLVSLAGSL 256 (318)
T ss_dssp TTTTEEEEECCCSSC-CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE---CCCCSSCCBSC-EEEEETTEE
T ss_pred CCCCEEEECCCCCCC-cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE---CCCCCCcccce-EEEEECCEE
Confidence 987654 3333333 244455545668888543 3678999999987643 22211121111 244568888
Q ss_pred EEEec--------------CCCeEEEEeCCCCeEEE
Q 019103 249 WANVW--------------QTDCIARISHEDGVVLG 270 (346)
Q Consensus 249 yaNv~--------------~sn~I~vID~~TG~Vv~ 270 (346)
|+--. ..++|.+.|+++.+=..
T Consensus 257 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 257 YAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred EEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 86421 24789999999987443
No 309
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.003 Score=65.70 Aligned_cols=184 Identities=13% Similarity=0.079 Sum_probs=110.9
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEe---ccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCc
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN---QMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~---~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
....+..+++|.||++|- + ..|.++|..+++...-. .+... .-..+..+ ++.||+.++. +-++++|+++.+
T Consensus 364 ~v~~i~~d~~g~lWigt~--~-~Gl~~~~~~~~~~~~~~~~~~~~~~-~v~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 364 VVSSVCDDGQGKLWIGTD--G-GGINVFENGKRVAIYNKENRELLSN-SVLCSLKDSEGNLWFGTYL-GNISYYNTRLKK 438 (781)
T ss_dssp CEEEEEECTTSCEEEEEB--S-SCEEEEETTEEEEECC-----CCCS-BEEEEEECTTSCEEEEETT-EEEEEECSSSCE
T ss_pred ceEEEEEcCCCCEEEEeC--C-CcEEEEECCCCeEEEccCCCCCCCc-ceEEEEECCCCCEEEEecc-CCEEEEcCCCCc
Confidence 346777888889999983 1 36999999887654321 12211 22345555 6789999874 458999998765
Q ss_pred EEEEEec---CCCceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCC
Q 019103 182 KLEEFTH---QMKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTD 256 (346)
Q Consensus 182 ~i~ti~~---~~peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn 256 (346)
. ..+.. ....-+.+..| .+.||++.. +-|+.+|+++.+..........+.+-..++.+..+ +|.||+... .+
T Consensus 439 ~-~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~ 515 (781)
T 3v9f_A 439 F-QIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-GG 515 (781)
T ss_dssp E-EECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-SS
T ss_pred E-EEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-CC
Confidence 4 33332 11234456666 457888654 67999999987654332221111111223334333 689999875 34
Q ss_pred eEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec
Q 019103 257 CIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 257 ~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG 308 (346)
-|.++|++++++.. +.. .. +. ..+..++|+.|++++ +|++.
T Consensus 516 Gl~~~~~~~~~~~~-~~~---~~-----~l-~~~~i~~i~~d~~g~-lWi~T 556 (781)
T 3v9f_A 516 GVGIYTPDMQLVRK-FNQ---YE-----GF-CSNTINQIYRSSKGQ-MWLAT 556 (781)
T ss_dssp CEEEECTTCCEEEE-ECT---TT-----TC-SCSCEEEEEECTTSC-EEEEE
T ss_pred CEEEEeCCCCeEEE-ccC---CC-----CC-CCCeeEEEEECCCCC-EEEEE
Confidence 59999999987644 321 11 11 134567899987765 66553
No 310
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.0034 Score=65.36 Aligned_cols=190 Identities=15% Similarity=0.051 Sum_probs=114.5
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEec--cCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCcE
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQ--MEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~--l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
....|..+.+|.||++|- + ..|.++|.+++++..-.. ++.. .-..+..+ .++||+.+. +-++++|+++.+.
T Consensus 408 ~v~~i~~d~~g~lWigt~--~-~Gl~~~~~~~~~~~~~~~~~~~~~-~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWFGTY--L-GNISYYNTRLKKFQIIELEKNELL-DVRVFYEDKNKKIWIGTH--AGVFVIDLASKKV 481 (781)
T ss_dssp BEEEEEECTTSCEEEEET--T-EEEEEECSSSCEEEECCSTTTCCC-CEEEEEECTTSEEEEEET--TEEEEEESSSSSC
T ss_pred ceEEEEECCCCCEEEEec--c-CCEEEEcCCCCcEEEeccCCCCCC-eEEEEEECCCCCEEEEEC--CceEEEeCCCCeE
Confidence 345777777889999874 2 479999999998654331 2222 22345555 579999997 6799999987654
Q ss_pred EEEEecC-----CCceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEe-eCCEEEEEecCC
Q 019103 183 LEEFTHQ-----MKDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEF-IKGEVWANVWQT 255 (346)
Q Consensus 183 i~ti~~~-----~peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~-~~G~LyaNv~~s 255 (346)
..-.... ...-..+..| .+.||++-..+-|+.+|+++.+... +.. .+|.+-..++.+.. .+|.||+...
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~-~~~l~~~~i~~i~~d~~g~lWi~T~-- 557 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK-FNQ-YEGFCSNTINQIYRSSKGQMWLATG-- 557 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEE-ECT-TTTCSCSCEEEEEECTTSCEEEEET--
T ss_pred EecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE-ccC-CCCCCCCeeEEEEECCCCCEEEEEC--
Confidence 3322111 1122345554 3467875433459999998876432 222 23333333344433 3789998764
Q ss_pred CeE-EEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 256 DCI-ARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 256 n~I-~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
+-+ .++|+++++.. .+.. .. +.+. +..++|+.|++|+ ||+++.+ -|+.+.
T Consensus 558 ~Glv~~~d~~~~~~~-~~~~---~~-----gl~~-~~i~~i~~d~~g~-lW~~t~~--Gl~~~~ 608 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQ-VFQR---KE-----GLPN-THIRAISEDKNGN-IWASTNT--GISCYI 608 (781)
T ss_dssp TEEEEESCTTTCCCE-EECG---GG-----TCSC-CCCCEEEECSSSC-EEEECSS--CEEEEE
T ss_pred CCceEEECCCCCcEE-Eccc---cC-----CCCC-ceEEEEEECCCCC-EEEEcCC--ceEEEE
Confidence 455 99999999853 3322 11 1222 3458999998765 6666533 366553
No 311
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.58 E-value=0.0079 Score=55.31 Aligned_cols=149 Identities=11% Similarity=0.142 Sum_probs=96.6
Q ss_pred cCCEEEEEcCCC----C-----CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeC-------CEEEEEEC
Q 019103 114 ENDTLFESTGLY----G-----RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ-------KTGFIYDQ 177 (346)
Q Consensus 114 ~d~~LyeStGly----g-----~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~-------~~v~V~D~ 177 (346)
.++.||+-.|.. + .+.+.++|+.+++-...-+++....+.+++..+++||+.--.. +.+++||+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 467899887731 1 1238899999998766656665555677888899999985442 57999999
Q ss_pred CCCcEEE--EEecCCCceeEEeeCCCEEEEECC-------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEE
Q 019103 178 NNLNKLE--EFTHQMKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (346)
Q Consensus 178 ~tl~~i~--ti~~~~peGwGLt~Dg~~LyvSdG-------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~L 248 (346)
.+.+-.. ..+.+ ..+.+.+..++.||+-=| .+.++++|+++.+-... .....+.... .+...+++|
T Consensus 135 ~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~-~~~~~~~~i 209 (318)
T 2woz_A 135 VAAKWSEVKNLPIK-VYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL---APMKTPRSMF-GVAIHKGKI 209 (318)
T ss_dssp TTTEEEEECCCSSC-EESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSC-EEEEETTEE
T ss_pred CCCCEeECCCCCCc-ccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEEC---CCCCCCcccc-eEEEECCEE
Confidence 8765443 33333 244455555677888443 46799999999876432 1211122111 244568888
Q ss_pred EEEec-----CCCeEEEEeCCCCe
Q 019103 249 WANVW-----QTDCIARISHEDGV 267 (346)
Q Consensus 249 yaNv~-----~sn~I~vID~~TG~ 267 (346)
|+--. ..+.+.+.|+++.+
T Consensus 210 yv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 210 VIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEcCcCCCCccceEEEEECCCCe
Confidence 86432 13678899999986
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.57 E-value=0.0025 Score=58.63 Aligned_cols=156 Identities=15% Similarity=0.079 Sum_probs=101.6
Q ss_pred eEEEecCCEEEEEcCC------CCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee------CCEEEEEE
Q 019103 109 GLLYAENDTLFESTGL------YGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL------QKTGFIYD 176 (346)
Q Consensus 109 GL~~~~d~~LyeStGl------yg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~------~~~v~V~D 176 (346)
+++.. +++||+-.|. .-.+.+.++|+.+++-...-+++...++.+++..+++||+.--. .+.+++||
T Consensus 93 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 171 (315)
T 4asc_A 93 GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYD 171 (315)
T ss_dssp EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEE
T ss_pred eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEe
Confidence 45555 5799988773 22467999999999876666677666777888899999998654 46899999
Q ss_pred CCCCcE--EEEEecCCCceeEEeeCCCEEEEECC------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEE
Q 019103 177 QNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEV 248 (346)
Q Consensus 177 ~~tl~~--i~ti~~~~peGwGLt~Dg~~LyvSdG------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~L 248 (346)
+.+.+- +...+.+ ..+-+.+.-+++||+.-| .+.++++|+++.+-... .....+.... .+...+++|
T Consensus 172 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~-~~~~~~~~l 246 (315)
T 4asc_A 172 PKKFEWKELAPMQTA-RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF---EAFPQERSSL-SLVSLVGTL 246 (315)
T ss_dssp TTTTEEEECCCCSSC-CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE---CCCSSCCBSC-EEEEETTEE
T ss_pred CCCCeEEECCCCCCc-hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC---CCCCCcccce-eEEEECCEE
Confidence 987644 3333333 244455444667888533 35799999999866432 2211122111 234557888
Q ss_pred EEEec--------------CCCeEEEEeCCCCeEEE
Q 019103 249 WANVW--------------QTDCIARISHEDGVVLG 270 (346)
Q Consensus 249 yaNv~--------------~sn~I~vID~~TG~Vv~ 270 (346)
|+--. ..++|.+.|+++.+=..
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 86321 23578899999986443
No 313
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.57 E-value=0.0072 Score=63.00 Aligned_cols=179 Identities=11% Similarity=0.057 Sum_probs=110.3
Q ss_pred cceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc------CCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECC
Q 019103 106 FTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM------EGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQN 178 (346)
Q Consensus 106 FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l------~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~ 178 (346)
....+..+++|.||++|. +.|.++|.++++....... .. .+-..+..+ .++||+.+. +-++++|++
T Consensus 453 ~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVS-KQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp CEEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCC-CCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred eeEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCC-ceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 446778888889999985 3699999999977544322 11 122345554 478999996 568999988
Q ss_pred CCcEEEEEec-----CCC--ceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEE
Q 019103 179 NLNKLEEFTH-----QMK--DGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVW 249 (346)
Q Consensus 179 tl~~i~ti~~-----~~p--eGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~Ly 249 (346)
+.+. .+.. +.+ .-..+..| .+.||++-.. -|+.+|+++.+.. .... .+|.|-..++.+..+ +|.||
T Consensus 526 ~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~~-~~~~-~~gl~~~~i~~i~~d~~g~lW 600 (795)
T 4a2l_A 526 GLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIK-RYNT-TNGLPNNVVYGILEDSFGRLW 600 (795)
T ss_dssp TTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTTEEE-EECG-GGTCSCSCEEEEEECTTSCEE
T ss_pred CCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCCcEE-EeCC-CCCCchhheEEEEECCCCCEE
Confidence 7765 3431 111 23445554 3457774322 7999999887553 2322 234443334444333 68999
Q ss_pred EEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCc-eeeEEEEeCCCCEEEEec
Q 019103 250 ANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGID-VLNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 250 aNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~-vlNGIA~d~~~~~LfVTG 308 (346)
+.. .+-|.++||+++++. .++. .. +.+... ..++++.+++|. ||+.+
T Consensus 601 i~t--~~Gl~~~~~~~~~~~-~~~~---~d-----Gl~~~~f~~~~~~~~~~G~-l~~g~ 648 (795)
T 4a2l_A 601 LST--NRGISCFNPETEKFR-NFTE---SD-----GLQSNQFNTASYCRTSVGQ-MYFGG 648 (795)
T ss_dssp EEE--TTEEEEEETTTTEEE-EECG---GG-----TCSCSCEEEEEEEECTTSC-EEEEE
T ss_pred EEc--CCceEEEcCCCCcEE-EcCC---cC-----CCccccCccCceeECCCCe-EEEec
Confidence 876 578999999999864 4432 11 112222 246777877765 55544
No 314
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.57 E-value=0.00021 Score=74.19 Aligned_cols=141 Identities=10% Similarity=0.092 Sum_probs=104.0
Q ss_pred CeEEEEECCCCcEEEEeccCCCeeEEEEEEe------------------------CCEEEEEEeeC-------------C
Q 019103 128 SSVRRVALETGKVEAINQMEGSYFGEGLTLL------------------------GEKLFQVTWLQ-------------K 170 (346)
Q Consensus 128 s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~------------------------g~~LY~ltw~~-------------~ 170 (346)
+....+|.+|.++.-++.++.+.=..|.... -+.+.+-+|+. +
T Consensus 217 ~~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 217 TMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred eEEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 3556789999999888766543211222111 13566667762 2
Q ss_pred --EEEEEECCC----C-cEEEEEecC-CCceeEEeeCCCEEEEEC-CCCeEEEEeCCCCc-------------EEEEEEe
Q 019103 171 --TGFIYDQNN----L-NKLEEFTHQ-MKDGWGLATDGKVLFGSD-GSSMLYQIDPQTLK-------------VIRKDIV 228 (346)
Q Consensus 171 --~v~V~D~~t----l-~~i~ti~~~-~peGwGLt~Dg~~LyvSd-Gs~~l~vIDp~T~k-------------vi~~I~V 228 (346)
.+-|+|... . ..+.-+|++ .|.|.-++|||+++++++ .+.++.|||.+.+. +.+.+++
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 578999876 2 456677886 799999999999999999 59999999988532 2667777
Q ss_pred ccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeCCCC----------eEEEEEEC
Q 019103 229 RYKGREVRNLNELEFI-KGEVWANVWQTDCIARISHEDG----------VVLGWVLL 274 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~~TG----------~Vv~~I~l 274 (346)
|- .|.+ .+|+ +|.+|.+.+.+..|++-+.++. .|+.++|+
T Consensus 377 Gl--GPlH----t~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv 427 (638)
T 3sbq_A 377 GL--GPLH----TTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDV 427 (638)
T ss_dssp CS--CEEE----EEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEEC
T ss_pred CC--cccE----EEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeecccc
Confidence 65 3665 6676 5799999999999999777765 79999988
No 315
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.56 E-value=0.0055 Score=56.31 Aligned_cols=150 Identities=11% Similarity=0.080 Sum_probs=98.4
Q ss_pred cCCEEEEEcCCC----C-----CCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEee--------CCEEEEEE
Q 019103 114 ENDTLFESTGLY----G-----RSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWL--------QKTGFIYD 176 (346)
Q Consensus 114 ~d~~LyeStGly----g-----~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~--------~~~v~V~D 176 (346)
-++.||+-.|.. + .+.+.++|+.+++-...-+++....+.+++..+++||+.--. .+.+++||
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEEC
Confidence 467888877631 1 134889999999876665677666677788899999998432 36799999
Q ss_pred CCCCcE--EEEEecCCCceeEEeeCCCEEEEECC-------CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCE
Q 019103 177 QNNLNK--LEEFTHQMKDGWGLATDGKVLFGSDG-------SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGE 247 (346)
Q Consensus 177 ~~tl~~--i~ti~~~~peGwGLt~Dg~~LyvSdG-------s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~ 247 (346)
+.+.+- +..++.+ ..+.+.+.-++.||+.=| .+.++++|+.+.+-.. +.....|.... .....+++
T Consensus 124 ~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~r~~~-~~~~~~~~ 198 (315)
T 4asc_A 124 RLSFKWGESDPLPYV-VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE---LAPMQTARSLF-GATVHDGR 198 (315)
T ss_dssp TTTTEEEECCCCSSC-CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEE---CCCCSSCCBSC-EEEEETTE
T ss_pred CCCCcEeECCCCCCc-ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEE---CCCCCCchhce-EEEEECCE
Confidence 987643 3333433 355555556677888544 3689999999987643 22211222111 13455888
Q ss_pred EEEEecC-----CCeEEEEeCCCCeE
Q 019103 248 VWANVWQ-----TDCIARISHEDGVV 268 (346)
Q Consensus 248 LyaNv~~-----sn~I~vID~~TG~V 268 (346)
||+--.. .+.+.+.|+++++-
T Consensus 199 iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 199 IIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EEEEeccCCCCccceEEEEECCCCeE
Confidence 8874322 35799999999853
No 316
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.55 E-value=0.0014 Score=67.25 Aligned_cols=173 Identities=11% Similarity=0.016 Sum_probs=101.7
Q ss_pred EEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEe-e----
Q 019103 95 VVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTW-L---- 168 (346)
Q Consensus 95 Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw-~---- 168 (346)
-+...|.....|..+.++..||+||+..|. ..+.+.+||+.+++-...-.++..-...+++.. +++||+.-- .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~-~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 233 DRTVTVTKHDMFCPGISMDGNGQIVVTGGN-DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp CCEEEECSCCCSSCEEEECTTSCEEEECSS-STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred eCcccCCCCCCccccccCCCCCCEEEeCCC-CCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc
Confidence 344555545566667888888999999884 445899999999987665566544445566776 889999854 2
Q ss_pred -CCEEEEEECCCCcEEEE-----EecCCCceeEEeeCCCEEEE----------ECCCCeEEEEeCCCCcEEEEEEeccCC
Q 019103 169 -QKTGFIYDQNNLNKLEE-----FTHQMKDGWGLATDGKVLFG----------SDGSSMLYQIDPQTLKVIRKDIVRYKG 232 (346)
Q Consensus 169 -~~~v~V~D~~tl~~i~t-----i~~~~peGwGLt~Dg~~Lyv----------SdGs~~l~vIDp~T~kvi~~I~V~~~G 232 (346)
.+.+.+||+++.+-... .+......-++...++++|+ .+..+.+..+|+++.+-.........+
T Consensus 312 ~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~ 391 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN 391 (656)
T ss_dssp CCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET
T ss_pred ccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccc
Confidence 26799999987654332 11110000011112233333 233678999999988755332221100
Q ss_pred -----eeeeecee--eEeeCCEEEEEecC--------CC---eEEEEeCCCCeEE
Q 019103 233 -----REVRNLNE--LEFIKGEVWANVWQ--------TD---CIARISHEDGVVL 269 (346)
Q Consensus 233 -----~pv~~lNE--LE~~~G~LyaNv~~--------sn---~I~vID~~TG~Vv 269 (346)
.+... .. +...+|+||+-=.. .+ .|.+.|+++.+-.
T Consensus 392 ~~~~~~~~~~-~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~ 445 (656)
T 1k3i_A 392 RGVAPDAMCG-NAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT 445 (656)
T ss_dssp TEECCCCBTC-EEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE
T ss_pred cccCCCCCCC-ceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee
Confidence 00000 01 11247888875321 23 6778889888743
No 317
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.51 E-value=0.013 Score=54.59 Aligned_cols=153 Identities=12% Similarity=0.102 Sum_probs=95.4
Q ss_pred EEEecCCEEEEEcCCCCCCeEEEEECCC--CcEEEEeccC-CCeeEEEEEEeCCEEEEEEee----------CCEEEEEE
Q 019103 110 LLYAENDTLFESTGLYGRSSVRRVALET--GKVEAINQME-GSYFGEGLTLLGEKLFQVTWL----------QKTGFIYD 176 (346)
Q Consensus 110 L~~~~d~~LyeStGlyg~s~V~~iDl~T--gkv~~~~~l~-~~~FgeGit~~g~~LY~ltw~----------~~~v~V~D 176 (346)
.+..-+++||+..|. ..+.+.++|+.+ .+-....+++ ....+.+++..+++||+.--. .+.+++||
T Consensus 14 ~~~~~~~~iyv~GG~-~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGS-AGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp EEEEETTEEEEECGG-GTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred EEEEECCEEEEEeCc-CCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 333336899998775 456899999985 6655555566 444567788889999997332 46899999
Q ss_pred CCCCcEEE--EEe-cCCCceeEEeeCCCEEEEECC----------------------------------------CCeEE
Q 019103 177 QNNLNKLE--EFT-HQMKDGWGLATDGKVLFGSDG----------------------------------------SSMLY 213 (346)
Q Consensus 177 ~~tl~~i~--ti~-~~~peGwGLt~Dg~~LyvSdG----------------------------------------s~~l~ 213 (346)
+.+.+-.. ..+ .+ ..+-+.+..+++||+-=| .+.++
T Consensus 93 ~~~~~W~~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMG-MAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp TTTTEEEECSCCCSSC-CSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred CCCCcEEECCCCCCcc-cccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 98765433 333 22 345554446677888544 26899
Q ss_pred EEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEec------CCCeEEEEeC--CCCe
Q 019103 214 QIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVW------QTDCIARISH--EDGV 267 (346)
Q Consensus 214 vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~------~sn~I~vID~--~TG~ 267 (346)
++|+.+.+-...-.... +...--.+...+++||+--. .++.+.+.|. ++.+
T Consensus 172 ~yd~~~~~W~~~~~~p~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~ 230 (357)
T 2uvk_A 172 SFDPSTQQWSYAGESPW---YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLK 230 (357)
T ss_dssp EEETTTTEEEEEEECSS---CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CE
T ss_pred EEeCCCCcEEECCCCCC---CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCc
Confidence 99999987654322221 11110124456888886421 2667877765 7765
No 318
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.45 E-value=0.0037 Score=65.02 Aligned_cols=192 Identities=17% Similarity=0.150 Sum_probs=123.9
Q ss_pred EEEEcCCCCCCeEEEEECCCCcEEEEecc-CC---Ce----------eEEE------------EE-----EeCCEEEEEE
Q 019103 118 LFESTGLYGRSSVRRVALETGKVEAINQM-EG---SY----------FGEG------------LT-----LLGEKLFQVT 166 (346)
Q Consensus 118 LyeStGlyg~s~V~~iDl~Tgkv~~~~~l-~~---~~----------FgeG------------it-----~~g~~LY~lt 166 (346)
.|.|.|..| +|+++-+-+++.+.++++ .+ .- .++| ++ .+|+.||+-+
T Consensus 72 ~f~SgG~sG--~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNd 149 (638)
T 3sbq_A 72 GFWSGGHQG--EVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFIND 149 (638)
T ss_dssp EEEECGGGC--CEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEE
T ss_pred EEeecCcCc--eEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEec
Confidence 677888555 999999999999999964 11 00 0111 11 3456799999
Q ss_pred eeCCEEEEEECCCCcEEEEEecC---CCceeEEe--eCCCEEEEE-C--------CC----------CeEEEEeCCCCcE
Q 019103 167 WLQKTGFIYDQNNLNKLEEFTHQ---MKDGWGLA--TDGKVLFGS-D--------GS----------SMLYQIDPQTLKV 222 (346)
Q Consensus 167 w~~~~v~V~D~~tl~~i~ti~~~---~peGwGLt--~Dg~~LyvS-d--------Gs----------~~l~vIDp~T~kv 222 (346)
-.+.++.++|.++++.-+-+..+ ...|..+- |+.+++|.. . |. .....||++|+++
T Consensus 150 kan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v 229 (638)
T 3sbq_A 150 KANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEM 229 (638)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSE
T ss_pred CCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEE
Confidence 99999999999999876655543 23343332 344444431 1 11 2345689999999
Q ss_pred EEEEEeccCCeeeeeceeeEeeCCEEEEEecCCC---------------------------------------eEEEEeC
Q 019103 223 IRKDIVRYKGREVRNLNELEFIKGEVWANVWQTD---------------------------------------CIARISH 263 (346)
Q Consensus 223 i~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn---------------------------------------~I~vID~ 263 (346)
.-.|.|..+ . .+ ..-.|.+++.|.|++++. .|-|||.
T Consensus 230 ~~Qv~v~gn--l-d~-~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~ 305 (638)
T 3sbq_A 230 AFQVIVDGN--L-DN-TDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDG 305 (638)
T ss_dssp EEEEEESSC--C-CC-EEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEEC
T ss_pred EEEEEcCCC--h-hh-cCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcc
Confidence 888888431 0 00 012333456666665542 3445555
Q ss_pred CC----C-eEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEeeccccccCC
Q 019103 264 ED----G-VVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLREMKRERKDG 329 (346)
Q Consensus 264 ~T----G-~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~~~~~~~~~ 329 (346)
+. + .++..|+ ....|.|+-.+|||+.++|+||+.|++.-+.+..+..-++++
T Consensus 306 ~~~~~~~~~~~~~iP--------------~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k 362 (638)
T 3sbq_A 306 RKKDGKDSKFTRYVP--------------VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK 362 (638)
T ss_dssp SCBTTBCCSSEEEEE--------------ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC
T ss_pred ccccccCCceEEEEe--------------CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc
Confidence 44 1 2333332 234789999999999999999999999999988766655554
No 319
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.43 E-value=0.011 Score=57.77 Aligned_cols=149 Identities=9% Similarity=-0.061 Sum_probs=88.6
Q ss_pred eeEEEec---CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCC----eeEEEEEEeCCEEEE-----------EEeeC
Q 019103 108 QGLLYAE---NDTLFESTGLYGRSSVRRVALETGKVEAINQMEGS----YFGEGLTLLGEKLFQ-----------VTWLQ 169 (346)
Q Consensus 108 qGL~~~~---d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~----~FgeGit~~g~~LY~-----------ltw~~ 169 (346)
.-+.|++ |+.+++|++ .+..|++||++||+.+..+.-+.. .....+.+++..+.. .--.+
T Consensus 182 ~~l~fs~~~g~~~~LaSgS--~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTT--IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp CEEEEEEEETSTTEEEEEE--TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eeEEeeccCCCCceEEEec--CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 3566665 668999988 677999999999999888853321 112234444444322 22356
Q ss_pred CEEEEEECCCCcEEEEEecCCCce---eEE--eeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee
Q 019103 170 KTGFIYDQNNLNKLEEFTHQMKDG---WGL--ATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI 244 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~ti~~~~peG---wGL--t~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~ 244 (346)
+++-++|+++.+.+..+.+..|+| .-+ +.++..+.....+++|.++|.++++.++++.-..+ ..+ .-+.|.
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~-~vv---s~vafS 335 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD-QHW---SFVKWS 335 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC---CCC---CEEEEC
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC-CeE---EEEEEC
Confidence 788889999999888764321222 222 22344444444578999999999999988752211 111 113343
Q ss_pred -CCEEEEEecCCCeEEEEe
Q 019103 245 -KGEVWANVWQTDCIARIS 262 (346)
Q Consensus 245 -~G~LyaNv~~sn~I~vID 262 (346)
||+..|+--.+++|-+=|
T Consensus 336 PDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp SSSSEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCcEEEec
Confidence 555444444466666544
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.28 E-value=0.0051 Score=61.28 Aligned_cols=112 Identities=14% Similarity=0.163 Sum_probs=68.5
Q ss_pred eeeeEEEEEEecCCCCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCe-------eEEEEEEe----
Q 019103 90 IYTIQVVNEFPHDPRAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSY-------FGEGLTLL---- 158 (346)
Q Consensus 90 ~~t~~Vv~t~phd~~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~-------FgeGit~~---- 158 (346)
-++++++.+- -..| .||++.+||+||++.- ...+|.+++..+|+......++... =--||+++
T Consensus 16 gf~~~~~a~~--l~~P--~~~a~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~ 89 (454)
T 1cru_A 16 NFDKKVILSN--LNKP--HALLWGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFK 89 (454)
T ss_dssp TSCEEEEECC--CSSE--EEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTT
T ss_pred CeEEEEEECC--CCCc--eEEEEcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcC
Confidence 3456666541 1345 4999999999999864 2247999998888765444443211 01267777
Q ss_pred -CCEEEEEEee------------CCEEEEEECCC--C-----cEE-EEEecC---CCceeEEeeCCCEEEEECC
Q 019103 159 -GEKLFQVTWL------------QKTGFIYDQNN--L-----NKL-EEFTHQ---MKDGWGLATDGKVLFGSDG 208 (346)
Q Consensus 159 -g~~LY~ltw~------------~~~v~V~D~~t--l-----~~i-~ti~~~---~peGwGLt~Dg~~LyvSdG 208 (346)
++.||++.-. .+.|+.++.+. . +++ ..++.. .+.+..+.+|| +||++.|
T Consensus 90 ~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 90 NNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp TSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred cCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 7899999753 35787776532 1 122 224322 23445567788 5999854
No 321
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.18 E-value=0.01 Score=55.26 Aligned_cols=143 Identities=14% Similarity=-0.081 Sum_probs=84.9
Q ss_pred CeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEe------eCCEEEEEEC--CCC--cEEEEEecCC-CceeE
Q 019103 128 SSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTW------LQKTGFIYDQ--NNL--NKLEEFTHQM-KDGWG 195 (346)
Q Consensus 128 s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw------~~~~v~V~D~--~tl--~~i~ti~~~~-peGwG 195 (346)
+.+.+||+.+++-...-+++. ...+.+++..+++||+.-- ..+.+++||. ++. +.+...+.+. ..+-.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~ 247 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGF 247 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCE
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccce
Confidence 689999999998666666653 3344778889999999832 3567888875 443 3333443321 23434
Q ss_pred EeeCCCEEEEECCC-----------------------CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEe
Q 019103 196 LATDGKVLFGSDGS-----------------------SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANV 252 (346)
Q Consensus 196 Lt~Dg~~LyvSdGs-----------------------~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv 252 (346)
++.-++.||+--|. +.+.++|+++.+-... +....+...- .....+++||+-=
T Consensus 248 ~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~-~~~~~~~~i~v~G 323 (357)
T 2uvk_A 248 AGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKS---GELSQGRAYG-VSLPWNNSLLIIG 323 (357)
T ss_dssp EEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEE---EECSSCCBSS-EEEEETTEEEEEE
T ss_pred EEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeC---CCCCCCcccc-eeEEeCCEEEEEe
Confidence 55556678886551 3688999998776532 2211122111 1345688888622
Q ss_pred c---C---CCeEEEEeCCCCeEEEEEEC
Q 019103 253 W---Q---TDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 253 ~---~---sn~I~vID~~TG~Vv~~I~l 274 (346)
- . .++|.++|.++++++....+
T Consensus 324 G~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 324 GETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 1 1 36799999999998877644
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.12 E-value=0.038 Score=57.65 Aligned_cols=204 Identities=11% Similarity=0.010 Sum_probs=118.9
Q ss_pred eeEEEec-CCEEEEEcCCCCC----CeEEEEECCCCcEEEEeccCCCeeEEEEEEe-CCEEEEEEeeCC--EEEEEECCC
Q 019103 108 QGLLYAE-NDTLFESTGLYGR----SSVRRVALETGKVEAINQMEGSYFGEGLTLL-GEKLFQVTWLQK--TGFIYDQNN 179 (346)
Q Consensus 108 qGL~~~~-d~~LyeStGlyg~----s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~-g~~LY~ltw~~~--~v~V~D~~t 179 (346)
.+.+... +++||+-.|..+. +.+.+||+.+++-...-+++..-++.+.+.. +++||+.-..+. .+++||+.+
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 4566654 6899998875442 5799999999987666667666667777885 899999843322 799999988
Q ss_pred CcEEEE-----EecCCCceeE-E--eeCCCEEEEECC--------CCeEEEEeCCCCcE-----EEEEEeccCCeeeeec
Q 019103 180 LNKLEE-----FTHQMKDGWG-L--ATDGKVLFGSDG--------SSMLYQIDPQTLKV-----IRKDIVRYKGREVRNL 238 (346)
Q Consensus 180 l~~i~t-----i~~~~peGwG-L--t~Dg~~LyvSdG--------s~~l~vIDp~T~kv-----i~~I~V~~~G~pv~~l 238 (346)
.+-..- .+.+ ..+-+ + ..+.++||+.-| .+.++.+|+.+.+- -..+.-.. ..+....
T Consensus 523 ~~W~~~~~~g~~p~~-r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~~~R~~~ 600 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQN-SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHP-LFQRYGS 600 (695)
T ss_dssp TEEEECCCSSGGGGS-CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECG-GGCCBSC
T ss_pred CceEEccCCCCCCCc-ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCC-CCCcccc
Confidence 654432 2222 12222 3 333478888654 36799999999871 12222110 0111111
Q ss_pred eeeEeeC-CEEEEEec--------CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecC
Q 019103 239 NELEFIK-GEVWANVW--------QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 239 NELE~~~-G~LyaNv~--------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK 309 (346)
.+...+ |+||+-=. ..+.|.+.|+++++-. .+++ .........| ..+-.+.+..+++ ++||.|.
T Consensus 601 -~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~-~~~~---p~~~~~~~~p-~~~gh~~~~~~~g-~i~v~GG 673 (695)
T 2zwa_A 601 -QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT-SIPI---SRRIWEDHSL-MLAGFSLVSTSMG-TIHIIGG 673 (695)
T ss_dssp -EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE-ECCC---CHHHHHHSCC-CCSSCEEECC----CEEEECC
T ss_pred -eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE-Eeec---cccccCCCCc-cceeeeEEEeCCC-EEEEEeC
Confidence 133445 88887322 3678999999999765 3332 2111000001 1111233333333 6777776
Q ss_pred C---------CCcEEEEEEe
Q 019103 310 L---------WPKLYEINLR 320 (346)
Q Consensus 310 ~---------Wp~l~ev~l~ 320 (346)
. |+.+|.++|.
T Consensus 674 g~~cfsfGt~~n~i~~ldl~ 693 (695)
T 2zwa_A 674 GATCYGFGSVTNVGLKLIAI 693 (695)
T ss_dssp EEECTTSCEEECCCEEEEEC
T ss_pred CccCcCccccccceEEEEEE
Confidence 2 7788888774
No 323
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.06 E-value=0.038 Score=54.47 Aligned_cols=154 Identities=13% Similarity=0.085 Sum_probs=102.0
Q ss_pred EEEEEEecC-----CCCcceeEEEe-c-------CCEEEEEcCCCCCCeEEEEECCCCcEEEEec---cC----------
Q 019103 94 QVVNEFPHD-----PRAFTQGLLYA-E-------NDTLFESTGLYGRSSVRRVALETGKVEAINQ---ME---------- 147 (346)
Q Consensus 94 ~Vv~t~phd-----~~~FTqGL~~~-~-------d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~---l~---------- 147 (346)
+++++|+.. +..|.+.|.++ . ++..|++.- +...|.+||+++|+.-+... .+
T Consensus 136 ~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~--~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G 213 (381)
T 3q6k_A 136 PEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF--LRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGG 213 (381)
T ss_dssp CEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET--TTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETT
T ss_pred eeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC--CCCcEEEEECCCCcEEEEccCCCccccCcceEECC
Confidence 899999764 34567889998 2 347999975 66799999999998654441 11
Q ss_pred ------CCeeEEEEEEe----CCEEEEEEeeCCEEEEEECCCCc---EEEEEec----C-CCceeEEeeC--CCEEEEEC
Q 019103 148 ------GSYFGEGLTLL----GEKLFQVTWLQKTGFIYDQNNLN---KLEEFTH----Q-MKDGWGLATD--GKVLFGSD 207 (346)
Q Consensus 148 ------~~~FgeGit~~----g~~LY~ltw~~~~v~V~D~~tl~---~i~ti~~----~-~peGwGLt~D--g~~LyvSd 207 (346)
.+.||..++.+ ++.||-..--+.+.|.+.++-|+ ....|.. + ..+|.+++.| .+.||.++
T Consensus 214 ~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~ 293 (381)
T 3q6k_A 214 KEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAE 293 (381)
T ss_dssp EEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEE
T ss_pred EEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEe
Confidence 24566666655 67899988889999999854222 1222221 1 2477777665 57899999
Q ss_pred -CCCeEEEEeCCC--C--cEEEEEEeccCCeeeeeceeeEee-CCEEEEEe
Q 019103 208 -GSSMLYQIDPQT--L--KVIRKDIVRYKGREVRNLNELEFI-KGEVWANV 252 (346)
Q Consensus 208 -Gs~~l~vIDp~T--~--kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv 252 (346)
+.+.|..+|+.+ + +-...+ +.+. .+...+.+-.. +|+||+..
T Consensus 294 ~~~~aI~~w~~~~~~~~~~n~~~l-~~d~--~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 294 ANTKQVSCWNTQKMPLRMKNTDVV-YTSS--RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp SSSSEEEEEETTSCSBCGGGEEEE-EECT--TCCSEEEEEECTTSCEEEEE
T ss_pred ccCCeEEEEeCCCCccccCceEEE-EECC--CccccCeEEECCCCeEEEEE
Confidence 789999999986 2 122222 2232 33455566554 67898765
No 324
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.02 E-value=0.008 Score=61.67 Aligned_cols=197 Identities=11% Similarity=0.043 Sum_probs=111.9
Q ss_pred eeEEEecCCEEEEEcCCCC----CCeEEEEECCCCcEEEE-----eccCCCeeEEEEEEeCCEEEEEEeeC---------
Q 019103 108 QGLLYAENDTLFESTGLYG----RSSVRRVALETGKVEAI-----NQMEGSYFGEGLTLLGEKLFQVTWLQ--------- 169 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg----~s~V~~iDl~Tgkv~~~-----~~l~~~~FgeGit~~g~~LY~ltw~~--------- 169 (346)
.+.++.+||++|+..|.+. .+.+.+||+.+++-... .++..... .++...++++|+.-+.+
T Consensus 290 ~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~ 368 (656)
T 1k3i_A 290 QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPS 368 (656)
T ss_dssp CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSS
T ss_pred cceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCc
Confidence 4667767899999988432 26799999999986553 23322211 13344566777776543
Q ss_pred CEEEEEECCCCcEEEEEecC---------CCceeEEe--eCCCEEEEECC---------CC---eEEEEeCCCCcEEEEE
Q 019103 170 KTGFIYDQNNLNKLEEFTHQ---------MKDGWGLA--TDGKVLFGSDG---------SS---MLYQIDPQTLKVIRKD 226 (346)
Q Consensus 170 ~~v~V~D~~tl~~i~ti~~~---------~peGwGLt--~Dg~~LyvSdG---------s~---~l~vIDp~T~kvi~~I 226 (346)
+.+..||+++.+........ ...|.++. .-+++||+.=| .+ .|.+.|+++.+-....
T Consensus 369 ~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 369 TAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred cceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 46778998877644433221 12455654 33667887644 12 7889999988764322
Q ss_pred EeccCCeeeeeceeeEeeCCEEEEEecC-----------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEE
Q 019103 227 IVRYKGREVRNLNELEFIKGEVWANVWQ-----------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGI 295 (346)
Q Consensus 227 ~V~~~G~pv~~lNELE~~~G~LyaNv~~-----------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGI 295 (346)
......+..........||+||+--.. .+++.+.||++++- -.+..+.. ...-.+.
T Consensus 449 -~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W---~~~~~~~~---------~R~~hs~ 515 (656)
T 1k3i_A 449 -SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF---YKQNPNSI---------VRVYHSI 515 (656)
T ss_dssp -TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE---EECCCCSS---------CCCTTEE
T ss_pred -cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce---eecCCCCC---------ccccccH
Confidence 112112221111122338899976532 36789999999863 33322210 0112334
Q ss_pred E-EeCCCCEEEEecCC-----CCcEEEEEE
Q 019103 296 A-WDSNRNRIFVTGKL-----WPKLYEINL 319 (346)
Q Consensus 296 A-~d~~~~~LfVTGK~-----Wp~l~ev~l 319 (346)
| +.+++ ++||.|.+ ....|.+++
T Consensus 516 a~ll~dg-~v~v~GG~~~~~~~~~~~~~e~ 544 (656)
T 1k3i_A 516 SLLLPDG-RVFNGGGGLCGDCTTNHFDAQI 544 (656)
T ss_dssp EEECTTS-CEEEEECCCCTTCSCCCCEEEE
T ss_pred hhcCCCc-EEEecCCCCCCCCCCCeeEEEE
Confidence 4 44554 57777765 355677776
No 325
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.94 E-value=0.03 Score=51.12 Aligned_cols=191 Identities=10% Similarity=0.017 Sum_probs=104.9
Q ss_pred EEEEEe-cCCCCcceeEEEec--CCEEEEEcCCCCCCeEEEEECCCCcE--EEEecc-CCCeeEEEEEEeC---CEEEEE
Q 019103 95 VVNEFP-HDPRAFTQGLLYAE--NDTLFESTGLYGRSSVRRVALETGKV--EAINQM-EGSYFGEGLTLLG---EKLFQV 165 (346)
Q Consensus 95 Vv~t~p-hd~~~FTqGL~~~~--d~~LyeStGlyg~s~V~~iDl~Tgkv--~~~~~l-~~~~FgeGit~~g---~~LY~l 165 (346)
.+.++. |. .....+.|++ ++.++.|++ .+..|++||+.+++. ...+.- .... ..++... +.++++
T Consensus 49 ~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s--~D~~v~iWd~~~~~~~~~~~~~~h~~~V--~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 49 LIADLRGHE--GPVWQVAWAHPMYGNILASCS--YDRKVIIWREENGTWEKSHEHAGHDSSV--NSVCWAPHDYGLILAC 122 (316)
T ss_dssp EEEEEECCS--SCEEEEEECCGGGSSCEEEEE--TTSCEEEECCSSSCCCEEEEECCCSSCC--CEEEECCTTTCSCEEE
T ss_pred EEEEEcCCC--ccEEEEEeCCCCCCCEEEEEE--CCCEEEEEECCCCcceEEEEccCCCCce--EEEEECCCCCCcEEEE
Confidence 344554 42 3346899974 367777777 456999999999853 332221 1222 3344432 345555
Q ss_pred EeeCCEEEEEECCCCcEE---EEEec-C-CCceeEEeeC-----------------CCEEEEECCCCeEEEEeCCCCc--
Q 019103 166 TWLQKTGFIYDQNNLNKL---EEFTH-Q-MKDGWGLATD-----------------GKVLFGSDGSSMLYQIDPQTLK-- 221 (346)
Q Consensus 166 tw~~~~v~V~D~~tl~~i---~ti~~-~-~peGwGLt~D-----------------g~~LyvSdGs~~l~vIDp~T~k-- 221 (346)
.-.++.+.++|..+.... ..+.. . .-....++++ ++.|.....+++|.++|.++..
T Consensus 123 gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 202 (316)
T 3bg1_A 123 GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQW 202 (316)
T ss_dssp ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCE
T ss_pred EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCcc
Confidence 666889999998765322 22111 0 0122234444 2444444457789999976542
Q ss_pred -EEEEEEeccCCeeeeeceeeEee-C----CEEEEEecCCCeEEEEeCCCCe---EE-EEEECCchhhhhhhccCCCCce
Q 019103 222 -VIRKDIVRYKGREVRNLNELEFI-K----GEVWANVWQTDCIARISHEDGV---VL-GWVLLPNLRERLVAAGYNGIDV 291 (346)
Q Consensus 222 -vi~~I~V~~~G~pv~~lNELE~~-~----G~LyaNv~~sn~I~vID~~TG~---Vv-~~I~l~~l~~~~~~~~~~~~~v 291 (346)
.+.++. .+..+ ++.+.+. + +.++|..-.+.+|.+-|.+++. .. ..+. . -...
T Consensus 203 ~~~~~l~--~h~~~---V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~---------~----~~~~ 264 (316)
T 3bg1_A 203 KEEQKLE--AHSDW---VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH---------K----FNDV 264 (316)
T ss_dssp EEEECCB--CCSSC---EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE---------E----CSSC
T ss_pred ceeeecc--cCCCc---eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh---------c----CCCc
Confidence 222221 12122 3345543 2 2566777678889888887631 00 0110 0 0134
Q ss_pred eeEEEEeCCCCEEEEecC
Q 019103 292 LNGIAWDSNRNRIFVTGK 309 (346)
Q Consensus 292 lNGIA~d~~~~~LfVTGK 309 (346)
.+.+||+|+++.|..++.
T Consensus 265 v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 265 VWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEEEECTTTCCEEEEES
T ss_pred EEEEEEcCCCCEEEEEcC
Confidence 678999999987766653
No 326
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.94 E-value=0.074 Score=55.03 Aligned_cols=193 Identities=12% Similarity=0.098 Sum_probs=109.4
Q ss_pred CCcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEe-ccCCCeeEEEEEEe-CCEEEEEEeeCCEEEEEECCCCc
Q 019103 104 RAFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAIN-QMEGSYFGEGLTLL-GEKLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 104 ~~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~-~l~~~~FgeGit~~-g~~LY~ltw~~~~v~V~D~~tl~ 181 (346)
......|..+.+|.||++|. +.|.+||-.+-+..... .+... .-..+..+ .+.||+.| .+-++.||..+.+
T Consensus 21 ~n~V~~I~qD~~G~lWigT~----~GL~ryDG~~~~~~~~~~~~~~~-~i~~i~~d~~g~lWigT--~~Gl~~yd~~~~~ 93 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSN----KGLFSYDGYSTQQHFTYGENNNT-RIYCGVIIDNTYLYMGT--DNGILVYNYRADR 93 (758)
T ss_dssp CCCEEEEEECTTSCEEEEES----SCEEEECSSCEEECSCTTSTTSS-CEEEEEEETTTEEEEEE--TTEEEEEETTTTE
T ss_pred cceEEEEEECCCCCEEEEEC----CCccccCCCceEEEEccCCCCCc-eEEEEEEcCCCcEEEEe--CCCeEEEeCCCCE
Confidence 44557788888899999985 26888885432211111 12222 22334443 57999999 3568999998865
Q ss_pred EEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCCCeEEE
Q 019103 182 KLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQTDCIAR 260 (346)
Q Consensus 182 ~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~v 260 (346)
...........=+.+..+.+.||+.... -|+.+|+++.+... +.-...+.+-..+..+..+ +|.||+... +-|.+
T Consensus 94 f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWigt~--~Gl~~ 169 (758)
T 3ott_A 94 YEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDNQIYVGTY--NGLCR 169 (758)
T ss_dssp ECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTCCEEEEET--TEEEE
T ss_pred EECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCCCEEEEeC--CCHhh
Confidence 4321000001122344455688885433 79999998876542 2111112222223334333 789998764 57999
Q ss_pred EeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 261 ISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 261 ID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
+|+++++.. .+..+.-. .......+.|+.|.+++.|||.-. .-|+..
T Consensus 170 ~~~~~~~~~-~~~~~~~~-------~~~~~~i~~i~~d~~~~~lWigt~--~Gl~~~ 216 (758)
T 3ott_A 170 YIPSNGKFE-GIPLPVHS-------SQSNLFVNSLLEDTTRQCVWIGTE--GYLFQY 216 (758)
T ss_dssp EETTTTEEE-EECCCCCT-------TCSSCCEEEEEEETTTTEEEEEEE--EEEEEE
T ss_pred CccCCCceE-EecCCCcc-------ccccceeEEEEEECCCCEEEEEEC--CCCeEE
Confidence 999999864 33331100 011224567888888888888542 345544
No 327
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.84 E-value=0.0066 Score=63.08 Aligned_cols=107 Identities=9% Similarity=0.113 Sum_probs=72.5
Q ss_pred CCceeEEeeCCCEEEEE--CCC--------------------CeEEEEeCC-------CCcEEEEEEecc----------
Q 019103 190 MKDGWGLATDGKVLFGS--DGS--------------------SMLYQIDPQ-------TLKVIRKDIVRY---------- 230 (346)
Q Consensus 190 ~peGwGLt~Dg~~LyvS--dGs--------------------~~l~vIDp~-------T~kvi~~I~V~~---------- 230 (346)
.||+..+.|..+.+|++ |.+ ..|+-+++. +|+..--+..++
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 58999999988888884 421 457777642 222211122121
Q ss_pred ------CCeeeeeceeeEee-CCEEEE-EecC-----------CCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCce
Q 019103 231 ------KGREVRNLNELEFI-KGEVWA-NVWQ-----------TDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDV 291 (346)
Q Consensus 231 ------~G~pv~~lNELE~~-~G~Lya-Nv~~-----------sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~v 291 (346)
.++++..+|.|.+. +|.||. +.-. .+.|.++||.+|++..-+.. |...-
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~------------P~~aE 532 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG------------PIGCE 532 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC------------CTTCE
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC------------CCCcc
Confidence 12356777888877 589998 5531 34799999999998666533 23446
Q ss_pred eeEEEEeCCCCEEEEec
Q 019103 292 LNGIAWDSNRNRIFVTG 308 (346)
Q Consensus 292 lNGIA~d~~~~~LfVTG 308 (346)
+|||+|+||+++|||+=
T Consensus 533 pnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 533 VTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred ccCCEECCCCCEEEEEE
Confidence 89999999999999974
No 328
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.82 E-value=0.06 Score=50.90 Aligned_cols=204 Identities=9% Similarity=-0.013 Sum_probs=103.0
Q ss_pred cCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc---CC-CeeEEEEEEe---------CCEEEEEEeeCCEEEEEECCCC
Q 019103 114 ENDTLFESTGLYGRSSVRRVALETGKVEAINQM---EG-SYFGEGLTLL---------GEKLFQVTWLQKTGFIYDQNNL 180 (346)
Q Consensus 114 ~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l---~~-~~FgeGit~~---------g~~LY~ltw~~~~v~V~D~~tl 180 (346)
+++.++.+.+ .+.+|+.||.++++......+ .. ..+-..++.. .+++.+..-.++++.+.|..+.
T Consensus 99 ~~~~~las~~--~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 99 VYSLFLACVC--QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EEEEEEEEEE--TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCEEEEEe--CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 3345666666 667999999999987654432 21 2223334442 3567777778999999998877
Q ss_pred cEEEEE-ecCC-CceeEEeeCCCE-EEEECCCCeEEEEeCCCCcEEEEEEeccCC----------e----------eeee
Q 019103 181 NKLEEF-THQM-KDGWGLATDGKV-LFGSDGSSMLYQIDPQTLKVIRKDIVRYKG----------R----------EVRN 237 (346)
Q Consensus 181 ~~i~ti-~~~~-peGwGLt~Dg~~-LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G----------~----------pv~~ 237 (346)
+.+.++ .+.. .....++|++.. |.+...+++|.++|..+.+...+..-...+ . ....
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 665554 4431 233345678765 555567889999999988765443221100 0 0001
Q ss_pred ceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhh----hh-ccCCCCceeeEEEEeC-CCCEEEEecC
Q 019103 238 LNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERL----VA-AGYNGIDVLNGIAWDS-NRNRIFVTGK 309 (346)
Q Consensus 238 lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~----~~-~~~~~~~vlNGIA~d~-~~~~LfVTGK 309 (346)
+..+.+. +|+..+..-.++.|.+-|..+++....+......... +. .+........+..+.+ ..+.+.++|-
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs 336 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS 336 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC
Confidence 1223332 5655555556888999999998876655321110000 00 0001112223344444 4455667777
Q ss_pred CCCcEEEEEE
Q 019103 310 LWPKLYEINL 319 (346)
Q Consensus 310 ~Wp~l~ev~l 319 (346)
...+|+-..+
T Consensus 337 ~Dg~V~lwd~ 346 (393)
T 4gq1_A 337 QHGLIQLINT 346 (393)
T ss_dssp TTTEEEEEET
T ss_pred CCCEEEEEEC
Confidence 7777665544
No 329
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.012 Score=59.39 Aligned_cols=117 Identities=12% Similarity=0.100 Sum_probs=78.8
Q ss_pred ceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcE-EEEeccCCCeeEEEE--EEeC-C-EEEEEEeeCCEEEEEECCCCc
Q 019103 107 TQGLLYAENDTLFESTGLYGRSSVRRVALETGKV-EAINQMEGSYFGEGL--TLLG-E-KLFQVTWLQKTGFIYDQNNLN 181 (346)
Q Consensus 107 TqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv-~~~~~l~~~~FgeGi--t~~g-~-~LY~ltw~~~~v~V~D~~tl~ 181 (346)
...+.|++++.|. +++ .+..|+.||+.+++. .........+ -..+ .... + .++++.-.++.+.++|..+.+
T Consensus 269 v~sv~~s~~~~la-sgs--~DgtV~lWD~~~~~~~~~~~~~H~~~-V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~ 344 (524)
T 2j04_B 269 ITTFDFLSPTTVV-CGF--KNGFVAEFDLTDPEVPSFYDQVHDSY-ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA 344 (524)
T ss_dssp EEEEEESSSSEEE-EEE--TTSEEEEEETTBCSSCSEEEECSSSC-EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH
T ss_pred EEEEEecCCCeEE-EEe--CCCEEEEEECCCCCCceEEeeccccc-EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC
Confidence 4688998766554 434 456999999998742 2222222221 2334 2222 3 677777789999999999887
Q ss_pred EEEEEecCCC----ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEE
Q 019103 182 KLEEFTHQMK----DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDI 227 (346)
Q Consensus 182 ~i~ti~~~~p----eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~ 227 (346)
.+.++....+ ....++||++.+..+.++++|.++|..+++.+.++.
T Consensus 345 ~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 345 TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee
Confidence 7666542111 346788999998878888899999999988765554
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.70 E-value=0.41 Score=49.42 Aligned_cols=185 Identities=12% Similarity=0.084 Sum_probs=108.0
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLE 184 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ 184 (346)
.....|..+.+|.||++|. ..|.++|..+++........... -..+...++.||++|.. -++.||.++.+. .
T Consensus 63 ~~i~~i~~d~~g~lWigT~----~Gl~~yd~~~~~f~~~~~~~~~~-i~~i~~~~g~lWigt~~--Gl~~~~~~~~~~-~ 134 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGTD----NGILVYNYRADRYEQPETDFPTD-VRTMALQGDTLWLGALN--GLYTYQLQSRKL-T 134 (758)
T ss_dssp SCEEEEEEETTTEEEEEET----TEEEEEETTTTEECCCSCCCCSC-EEEEEEETTEEEEEETT--EEEEEETTTCCE-E
T ss_pred ceEEEEEEcCCCcEEEEeC----CCeEEEeCCCCEEECcccCCCce-EEEEEecCCcEEEEcCC--cceeEeCCCCeE-E
Confidence 3456777788889999985 37999999998764411111111 12344567899999853 789999887654 3
Q ss_pred EEec---CC--CceeEEeeC-CCEEEEECCCCeEEEEeCCCCcEEEEEEeccC-CeeeeeceeeEee-C-CEEEEEecCC
Q 019103 185 EFTH---QM--KDGWGLATD-GKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYK-GREVRNLNELEFI-K-GEVWANVWQT 255 (346)
Q Consensus 185 ti~~---~~--peGwGLt~D-g~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~-G~pv~~lNELE~~-~-G~LyaNv~~s 255 (346)
.+.. +. ..=+.+..| .+.||+.-. +-|+.+|+.+.+.. .+..... +.+-..++.+..+ + +.||+...
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE--
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC--
Confidence 3421 11 122456565 567887432 46999999887643 2222111 1111123344333 3 47998764
Q ss_pred CeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEE
Q 019103 256 DCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEI 317 (346)
Q Consensus 256 n~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev 317 (346)
+-+.++|++++++...-.+ . .+....|+.|.++ .|||.-. .-|+.+
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l---~----------~~~i~~i~~d~~g-~lWigT~--~Gl~~~ 256 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAF---H----------NNSIKSLALDGNG-DLLAGTD--NGLYVY 256 (758)
T ss_dssp EEEEEEETTTTEEEEEEEE---E----------EEEEEEEEECTTC-CEEEEET--TEEEEE
T ss_pred CCCeEEcCCCCeEEeccCC---C----------CCeEEEEEEcCCC-CEEEEeC--CceeEE
Confidence 4699999999987543211 1 1245677777654 4666532 345554
No 331
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.66 E-value=0.22 Score=48.82 Aligned_cols=176 Identities=13% Similarity=0.108 Sum_probs=110.1
Q ss_pred eeEEEecCCEEEEEcCCCCCCeEEEEECCCCc---------E--EEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEE
Q 019103 108 QGLLYAENDTLFESTGLYGRSSVRRVALETGK---------V--EAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYD 176 (346)
Q Consensus 108 qGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgk---------v--~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D 176 (346)
.-|++++...|+.++| + +.+.++++++.+ . ...++++. ....++ +++.|+++ .++.+.+||
T Consensus 41 nlLais~~~gll~a~~--~-~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~--~~~~l~v~d 112 (388)
T 1xip_A 41 QNLDISNSKSLFVAAS--G-SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS--TRNALYSLD 112 (388)
T ss_dssp BCEEEETTTTEEEEEE--T-TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE--ESSEEEEEE
T ss_pred cEEEEcCCCCEEEEeC--C-CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE--cCCcEEEEE
Confidence 6789988776666655 2 488889876543 1 13446776 666555 88999998 779999999
Q ss_pred CCCCcEEEEEec-CCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCC
Q 019103 177 QNNLNKLEEFTH-QMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQT 255 (346)
Q Consensus 177 ~~tl~~i~ti~~-~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~s 255 (346)
..++....+++. ..+ =-.+-+-...+.+...++.|+++|.++.+... +.. ...-+.|-..-+.+. ...
T Consensus 113 v~sl~~~~~~~~~~~~-v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~---~~~------~Vs~v~WSpkG~~vg-~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKP-VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ---LAQ------NVTSFDVTNSQLAVL-LKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSC-EEEEEECSSEEEEEETTSEEEEEETTTCCEEE---EEE------SEEEEEECSSEEEEE-ETT
T ss_pred chhhhccCccceeecc-eeeEEecCCCEEEEECCCCEEEEEccCCcccc---ccC------CceEEEEcCCceEEE-EcC
Confidence 998887665543 211 01222223236666678899999998877643 211 112355553324333 357
Q ss_pred CeEEEEeCCCCeE--EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEE
Q 019103 256 DCIARISHEDGVV--LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFV 306 (346)
Q Consensus 256 n~I~vID~~TG~V--v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfV 306 (346)
+.|...+++++++ .++|+.+ +.+.+. .......-.|.|.+++..|.+
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~P---p~~~~~-~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLP---SELEEL-PVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCC---HHHHTS-CTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCC---cccccc-cCCCeeEEEEEEecCCeEEEE
Confidence 8899999999998 7888553 333210 111245667888876554443
No 332
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.52 E-value=0.044 Score=57.39 Aligned_cols=153 Identities=10% Similarity=-0.050 Sum_probs=83.5
Q ss_pred eeEEEe-cCCE--EEEEcCCCCC--CeEEEEECCCC-cEEEEeccCCCeeEEEEEEeCCEEEEEEeeC----CEEEEEEC
Q 019103 108 QGLLYA-ENDT--LFESTGLYGR--SSVRRVALETG-KVEAINQMEGSYFGEGLTLLGEKLFQVTWLQ----KTGFIYDQ 177 (346)
Q Consensus 108 qGL~~~-~d~~--LyeStGlyg~--s~V~~iDl~Tg-kv~~~~~l~~~~FgeGit~~g~~LY~ltw~~----~~v~V~D~ 177 (346)
.+..++ |||+ +|... ..|+ .+|.++|+++| +.+.. .++....+-..+.+|+.||...... .++++.+.
T Consensus 177 ~~~~~S~PDG~~lAy~~~-~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVD-MSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEECTTTTCEEEEEEE-SSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeeEecCCCCCEEEEEEe-CCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 457889 9994 34332 2243 46999999999 73211 1111111222345677777665432 47999998
Q ss_pred CCCcEE--EEEecC---CCceeEEeeCCCEEEE-EC--CCCeEEEEeCCCCcE-E--EEEEeccCCeeeeeceeeEee-C
Q 019103 178 NNLNKL--EEFTHQ---MKDGWGLATDGKVLFG-SD--GSSMLYQIDPQTLKV-I--RKDIVRYKGREVRNLNELEFI-K 245 (346)
Q Consensus 178 ~tl~~i--~ti~~~---~peGwGLt~Dg~~Lyv-Sd--Gs~~l~vIDp~T~kv-i--~~I~V~~~G~pv~~lNELE~~-~ 245 (346)
.+.+.. ..+... .-.+..+++||++|++ +. +.+.|+++|+++.+. . ..+ +.....+.. ..++. +
T Consensus 255 gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-~~~~~~~~~---s~~~~~g 330 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIV-RPREKGVRY---DVQMHGT 330 (751)
T ss_dssp TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEES-SCCCTTCCE---EEEEETT
T ss_pred CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEe-ecCCCCceE---EEeeeeC
Confidence 876422 122211 1123357899998876 32 477999999987521 1 111 111111211 12212 5
Q ss_pred CEEE-EEecC---CCeEEEEeCCCC
Q 019103 246 GEVW-ANVWQ---TDCIARISHEDG 266 (346)
Q Consensus 246 G~Ly-aNv~~---sn~I~vID~~TG 266 (346)
+++| .++.. ...|.++|.+++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~ 355 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQP 355 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTST
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCc
Confidence 5665 45542 347999998863
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.50 E-value=0.058 Score=56.31 Aligned_cols=158 Identities=9% Similarity=0.047 Sum_probs=99.8
Q ss_pred eEEEecCCEEEEEcCCC--CCCeEEEEECCCCcEEEEe-c-----cCCCeeEEEEEEe--CCEEEEEEee------CCEE
Q 019103 109 GLLYAENDTLFESTGLY--GRSSVRRVALETGKVEAIN-Q-----MEGSYFGEGLTLL--GEKLFQVTWL------QKTG 172 (346)
Q Consensus 109 GL~~~~d~~LyeStGly--g~s~V~~iDl~Tgkv~~~~-~-----l~~~~FgeGit~~--g~~LY~ltw~------~~~v 172 (346)
|-...-++.||+-.|.. ..+.+.+||+.+++-.... + ++..-.+.+++.. +++||+.--. -+.+
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv 470 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDN 470 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCC
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccE
Confidence 54444467899887742 2457999999999865554 3 4544556778888 9999998422 3679
Q ss_pred EEEECCC--CcEEEEEecCCCceeEEee-CCCEEEEECC---CCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee--
Q 019103 173 FIYDQNN--LNKLEEFTHQMKDGWGLAT-DGKVLFGSDG---SSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-- 244 (346)
Q Consensus 173 ~V~D~~t--l~~i~ti~~~~peGwGLt~-Dg~~LyvSdG---s~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-- 244 (346)
++||+.+ ++.+...+.+ ..+.+.+. .++.||+.=| ...++++|+++.+-...-..+....+......+.+.
T Consensus 471 ~~yd~~t~~W~~~~~~p~~-R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLSHT-RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp EEEETTTTEEEECCCCSBC-CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EEEeCCCCcEEECCCCCCC-cccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 9999988 4555555544 35556655 4777888644 228999999998764322211111122111112222
Q ss_pred CCEEEEEecC-------CCeEEEEeCCCCe
Q 019103 245 KGEVWANVWQ-------TDCIARISHEDGV 267 (346)
Q Consensus 245 ~G~LyaNv~~-------sn~I~vID~~TG~ 267 (346)
+++||+--.. .+++.+.|+++.+
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2788874322 4789999999998
No 334
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=95.80 E-value=0.46 Score=46.43 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=82.3
Q ss_pred EEEEEEeeCC--EEEEEECCCCcEEEEEecC--CCceeE-----E-eeCCCEEEEEC-CCCeEEEEeCCCCcEEEEEEec
Q 019103 161 KLFQVTWLQK--TGFIYDQNNLNKLEEFTHQ--MKDGWG-----L-ATDGKVLFGSD-GSSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 161 ~LY~ltw~~~--~v~V~D~~tl~~i~ti~~~--~peGwG-----L-t~Dg~~LyvSd-Gs~~l~vIDp~T~kvi~~I~V~ 229 (346)
.||-.+-+.+ .+-+||.++++++++++.+ .|.|.+ + ..+.+.+|+++ ....|+.+|.+ +++++++...
T Consensus 41 yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~-G~~~~k~~~~ 119 (369)
T 3s9j_A 41 YLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSINSQ-GEIIRNYNFQ 119 (369)
T ss_dssp EEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEECTT-CCEEEEEECC
T ss_pred EEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEECCC-ceEEEEEecC
Confidence 5777888888 9999999999999999974 566644 3 34677888876 78899999975 7999999887
Q ss_pred cCCeeeee------cee-eEeeCCEEEEEec------------CCCeEEEEeCCCCeEEEEEEC--Cchh
Q 019103 230 YKGREVRN------LNE-LEFIKGEVWANVW------------QTDCIARISHEDGVVLGWVLL--PNLR 278 (346)
Q Consensus 230 ~~G~pv~~------lNE-LE~~~G~LyaNv~------------~sn~I~vID~~TG~Vv~~I~l--~~l~ 278 (346)
..+..+.. -|. +-..++.+|++.- ....++.||+.++++ .++++ +++.
T Consensus 120 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~-~~l~l~yP~~~ 188 (369)
T 3s9j_A 120 TPEGRFTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEV-KWIPIFYPPIF 188 (369)
T ss_dssp CTTSCCCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCE-EEEEEECCSCC
T ss_pred CCccccccccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCCcE-EEeeccCCccc
Confidence 65432210 011 2223567887422 234799999999997 56665 5543
No 335
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.75 E-value=0.096 Score=52.49 Aligned_cols=109 Identities=12% Similarity=0.048 Sum_probs=59.6
Q ss_pred EEEEE--eCC-EEEEEEeeCCEEEEEECCCC---cEEEEEec----------C-CCceeEEeeC---CCEEEEEC---CC
Q 019103 153 EGLTL--LGE-KLFQVTWLQKTGFIYDQNNL---NKLEEFTH----------Q-MKDGWGLATD---GKVLFGSD---GS 209 (346)
Q Consensus 153 eGit~--~g~-~LY~ltw~~~~v~V~D~~tl---~~i~ti~~----------~-~peGwGLt~D---g~~LyvSd---Gs 209 (346)
.+|+. ++. +||++. +.++|+++|.+.. +.+..++. + ..-|+++.|| ..+||++. ..
T Consensus 17 ~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred eEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 34554 453 688865 6789999986532 12333321 1 1233556665 56888853 11
Q ss_pred ----------CeEEEEeC----------CCCcEEEEEEeccCCeeeeeceeeEee-CCEEEEEecCC-------------
Q 019103 210 ----------SMLYQIDP----------QTLKVIRKDIVRYKGREVRNLNELEFI-KGEVWANVWQT------------- 255 (346)
Q Consensus 210 ----------~~l~vIDp----------~T~kvi~~I~V~~~G~pv~~lNELE~~-~G~LyaNv~~s------------- 255 (346)
+.|.-+.. .+.+++-++.... ..++-..|.+. ||+||+++-..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~---~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~ 172 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH---RKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGL 172 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS---SSSCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC---CcccCCcEeECCCCcEEEEeCCCCCCCCccccccCc
Confidence 24543332 2234444444322 22344556665 78999987542
Q ss_pred ----CeEEEEeCCC
Q 019103 256 ----DCIARISHED 265 (346)
Q Consensus 256 ----n~I~vID~~T 265 (346)
..|++||++.
T Consensus 173 ~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 173 SDFTGSVLRLDVDT 186 (463)
T ss_dssp CSCTTEEEEEBCCC
T ss_pred CCCCeeEEEEECCC
Confidence 3488888875
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.052 Score=52.52 Aligned_cols=115 Identities=8% Similarity=0.011 Sum_probs=75.9
Q ss_pred CCEEEEEEeeCCEEEEEECCCCcEEEEEecC-CCceeEEe----eCCCEEEEEC--CCCeEEEEeCCCCcEEEEEEecc-
Q 019103 159 GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQ-MKDGWGLA----TDGKVLFGSD--GSSMLYQIDPQTLKVIRKDIVRY- 230 (346)
Q Consensus 159 g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~-~peGwGLt----~Dg~~LyvSd--Gs~~l~vIDp~T~kvi~~I~V~~- 230 (346)
++.+|+.+. ++.++.+|++|++++-+++.. ...-.+.. ++++.+|+-+ ++.+|+.+|++++...-.+.+..
T Consensus 10 ~~~V~v~t~-dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADV-EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEET-TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeC-CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 356777775 588999999999999999864 00111111 1244566654 68899999999987665555532
Q ss_pred -CCeeeeeceeeEe-------eCCEEEEEecCCCeEEEEeCCCCeEEEEEECC
Q 019103 231 -KGREVRNLNELEF-------IKGEVWANVWQTDCIARISHEDGVVLGWVLLP 275 (346)
Q Consensus 231 -~G~pv~~lNELE~-------~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~ 275 (346)
...|+..-..--. .+|.||+..+ ...++.||.+||+++-+....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM-RTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE-EEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEec-CCEEEEEECCCCcEEEEEecC
Confidence 1112210000001 5778998875 778999999999999888663
No 337
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=95.47 E-value=0.45 Score=46.54 Aligned_cols=152 Identities=10% Similarity=0.038 Sum_probs=95.7
Q ss_pred cCCE--EEEEcCCCCCC--eEEEEECCCCcEEEEeccCC-CeeEE-----EEE-EeCCEEEEEEeeCCEEEEEECCCCcE
Q 019103 114 ENDT--LFESTGLYGRS--SVRRVALETGKVEAINQMEG-SYFGE-----GLT-LLGEKLFQVTWLQKTGFIYDQNNLNK 182 (346)
Q Consensus 114 ~d~~--LyeStGlyg~s--~V~~iDl~Tgkv~~~~~l~~-~~Fge-----Git-~~g~~LY~ltw~~~~v~V~D~~tl~~ 182 (346)
.+|+ ||-=+. ..+ .|.++|++++++++++++.. +|=|. |+- ...+.||+.++....++.+| ..+++
T Consensus 36 ~~~k~yL~~~N~--~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l~n-~~G~~ 112 (369)
T 3s9j_A 36 ENGKEYLHFENT--QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSSIN-SQGEI 112 (369)
T ss_dssp ETTEEEEEEEEC--STTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEEEC-TTCCE
T ss_pred cCCcEEEEEeCC--CCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEEEC-CCceE
Confidence 4554 444444 556 99999999999999998842 11111 232 24588999999999999999 46899
Q ss_pred EEEEecC-CCceeEEee-------------CCCEEEEE-C------------CCCeEEEEeCCCCcEEEEEEe--cc-CC
Q 019103 183 LEEFTHQ-MKDGWGLAT-------------DGKVLFGS-D------------GSSMLYQIDPQTLKVIRKDIV--RY-KG 232 (346)
Q Consensus 183 i~ti~~~-~peGwGLt~-------------Dg~~LyvS-d------------Gs~~l~vIDp~T~kvi~~I~V--~~-~G 232 (346)
+.++... .+.+ +++ ++..+|++ + ....++.+|+.+.++. .+.+ .. .+
T Consensus 113 ~~k~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~a~~dl~~~~~~-~l~l~yP~~~~ 189 (369)
T 3s9j_A 113 IRNYNFQTPEGR--FTPLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPRTHMFASQDLRTGEVK-WIPIFYPPIFK 189 (369)
T ss_dssp EEEEECCCTTSC--CCCCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGGSEEEEEEETTTCCEE-EEEEECCSCCC
T ss_pred EEEEecCCCccc--cccccccccccCcceecCceEEEeccccccccchhhhccCceEEEEECCCCcEE-EeeccCCcccc
Confidence 9998874 2233 331 13346774 2 1337899999988875 2333 21 01
Q ss_pred eee----e-eceee--EeeCCEEEEEecCCCeEEEEeCCCCeEEEEEE
Q 019103 233 REV----R-NLNEL--EFIKGEVWANVWQTDCIARISHEDGVVLGWVL 273 (346)
Q Consensus 233 ~pv----~-~lNEL--E~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~ 273 (346)
..+ + .-.+. .+.+++++.+-+.++.|.+.| .++. +.+++
T Consensus 190 ~~~~~~~~~~~~~~s~~~~~~~~Iis~~~~dsIyv~~-~~~~-~~~~~ 235 (369)
T 3s9j_A 190 EEYDNIAGGYGFSYDYNYKESRLVCGFFGYDSLMVTD-DLKH-IRWYN 235 (369)
T ss_dssp CCCSSEEECCCEEEEEETTTTEEEEEETTCSEEEEES-SSSC-EEEEE
T ss_pred cccccccCCccceeEEEEECCEEEEEeccCCeEEEEc-Cccc-eeeec
Confidence 110 0 00111 123689999999999999998 4444 45443
No 338
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.45 E-value=0.35 Score=50.52 Aligned_cols=162 Identities=13% Similarity=0.072 Sum_probs=89.8
Q ss_pred CcceeEEEecCCE-EEEEcCCCCCCeEEEEECCCCc--E-EEEe-cc-CCCeeEEEEE-EeCCEEEEEEeeC----CEEE
Q 019103 105 AFTQGLLYAENDT-LFESTGLYGRSSVRRVALETGK--V-EAIN-QM-EGSYFGEGLT-LLGEKLFQVTWLQ----KTGF 173 (346)
Q Consensus 105 ~FTqGL~~~~d~~-LyeStGlyg~s~V~~iDl~Tgk--v-~~~~-~l-~~~~FgeGit-~~g~~LY~ltw~~----~~v~ 173 (346)
.|..++.+++||+ |+.+....+.+.|.++|+++++ . +..+ +- ....|. +. ..|++||.++..+ ..++
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s--~~~~~g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD--VQMHGTSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE--EEEETTTEEEEEECTTTCTTCEEE
T ss_pred ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE--EeeeeCCEEEEEeCCCCCCCcEEE
Confidence 4556888999994 5555444467899999999863 2 0222 11 111121 22 2388999887654 4899
Q ss_pred EEECCCCcEEEE--EecCCC-ceeEEeeCCCEEEEE---CCCCeEEEEeC-------CCCcEEEEEEeccCCeeeeec-e
Q 019103 174 IYDQNNLNKLEE--FTHQMK-DGWGLATDGKVLFGS---DGSSMLYQIDP-------QTLKVIRKDIVRYKGREVRNL-N 239 (346)
Q Consensus 174 V~D~~tl~~i~t--i~~~~p-eGwGLt~Dg~~LyvS---dGs~~l~vIDp-------~T~kvi~~I~V~~~G~pv~~l-N 239 (346)
++|.++.....+ ++.... .-.+++.++++|+++ ||...|+++|+ .+.+....|.....+...... |
T Consensus 349 ~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~ 428 (751)
T 2xe4_A 349 IAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVES 428 (751)
T ss_dssp EEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGG
T ss_pred EEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccC
Confidence 999875322222 332200 112356678887764 46779999996 444413444443322111100 0
Q ss_pred ee--EeeCCEEEE--EecCC-CeEEEEeCCCCeEE
Q 019103 240 EL--EFIKGEVWA--NVWQT-DCIARISHEDGVVL 269 (346)
Q Consensus 240 EL--E~~~G~Lya--Nv~~s-n~I~vID~~TG~Vv 269 (346)
. ++.+++++. +...+ ..|..+|.++|+..
T Consensus 429 -~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~ 462 (751)
T 2xe4_A 429 -QMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRT 462 (751)
T ss_dssp -GCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEE
T ss_pred -cccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEE
Confidence 0 233444443 33332 46899999998753
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.83 E-value=0.076 Score=51.40 Aligned_cols=112 Identities=9% Similarity=0.066 Sum_probs=78.2
Q ss_pred CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccC--CCeeEE--EEEEeCCEEEEEE-eeCCEEEEEECCCCcEEEEEecC
Q 019103 115 NDTLFESTGLYGRSSVRRVALETGKVEAINQME--GSYFGE--GLTLLGEKLFQVT-WLQKTGFIYDQNNLNKLEEFTHQ 189 (346)
Q Consensus 115 d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~--~~~Fge--Git~~g~~LY~lt-w~~~~v~V~D~~tl~~i~ti~~~ 189 (346)
++.+|++|. +..|+.+|.+||+++=+++.+ ..+... +....++.+|+.. -.++.++.+|++++...-.+..+
T Consensus 10 ~~~V~v~t~---dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADV---EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEET---TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeC---CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 368888876 459999999999998887665 222210 0011245788886 57999999999999777666653
Q ss_pred ---CCceeEEe-----------eCCCEEEEECCCCeEEEEeCCCCcEEEEEEec
Q 019103 190 ---MKDGWGLA-----------TDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVR 229 (346)
Q Consensus 190 ---~peGwGLt-----------~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~ 229 (346)
.-.+...+ .+++.+|+...+.+++.||++|++++-+..++
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 00111111 15778888766789999999999998887765
No 340
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=94.17 E-value=1.2 Score=43.54 Aligned_cols=132 Identities=10% Similarity=0.005 Sum_probs=81.6
Q ss_pred EEEeCCEEEEEEeeCCEEEEEECCCCc-----------EEEEEecCCCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEE
Q 019103 155 LTLLGEKLFQVTWLQKTGFIYDQNNLN-----------KLEEFTHQMKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVI 223 (346)
Q Consensus 155 it~~g~~LY~ltw~~~~v~V~D~~tl~-----------~i~ti~~~~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi 223 (346)
++...+.++.+.. +.+.|+++++++ ....++++.....++ |+++|+++++ +.|+++|..++...
T Consensus 45 is~~~gll~a~~~--~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~~~-~~l~v~dv~sl~~~ 119 (388)
T 1xip_A 45 ISNSKSLFVAASG--SKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVSTR-NALYSLDLEELSEF 119 (388)
T ss_dssp EETTTTEEEEEET--TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEEES-SEEEEEESSSTTCE
T ss_pred EcCCCCEEEEeCC--CEEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEEcC-CcEEEEEchhhhcc
Confidence 4444566666664 577778776655 224556553344444 9999999954 69999999998876
Q ss_pred EEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCE
Q 019103 224 RKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNR 303 (346)
Q Consensus 224 ~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 303 (346)
.++.... .++ +.+-+.... ++.+-.++.|.+.|.+++.... + .. ..-.+||+|+|
T Consensus 120 ~~~~~~~--~~v---~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~-~-----~~-----------~Vs~v~WSpkG-- 174 (388)
T 1xip_A 120 RTVTSFE--KPV---FQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ-L-----AQ-----------NVTSFDVTNSQ-- 174 (388)
T ss_dssp EEEEECS--SCE---EEEEECSSE-EEEEETTSEEEEEETTTCCEEE-E-----EE-----------SEEEEEECSSE--
T ss_pred Cccceee--cce---eeEEecCCC-EEEEECCCCEEEEEccCCcccc-c-----cC-----------CceEEEEcCCc--
Confidence 6665433 222 233333334 4445567889999999888643 1 10 23579999999
Q ss_pred EEEecCCCCcEEEE
Q 019103 304 IFVTGKLWPKLYEI 317 (346)
Q Consensus 304 LfVTGK~Wp~l~ev 317 (346)
+.+..+ .+++...
T Consensus 175 ~~vg~~-dg~i~~~ 187 (388)
T 1xip_A 175 LAVLLK-DRSFQSF 187 (388)
T ss_dssp EEEEET-TSCEEEE
T ss_pred eEEEEc-CCcEEEE
Confidence 444444 3555444
No 341
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.97 E-value=4.9 Score=39.98 Aligned_cols=206 Identities=13% Similarity=-0.017 Sum_probs=102.8
Q ss_pred eeEEEecC----CEEEEEcCCCC----------CCeEEEEECCC----------CcEEEEec-cCCCeeEEEEEEeC-CE
Q 019103 108 QGLLYAEN----DTLFESTGLYG----------RSSVRRVALET----------GKVEAINQ-MEGSYFGEGLTLLG-EK 161 (346)
Q Consensus 108 qGL~~~~d----~~LyeStGlyg----------~s~V~~iDl~T----------gkv~~~~~-l~~~~FgeGit~~g-~~ 161 (346)
.||+++|+ +.||++-...+ .+.|.++.+.. .+++..++ -....+|-.|+... +.
T Consensus 72 lgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~ 151 (463)
T 2wg3_C 72 LSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF 151 (463)
T ss_dssp EEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC
T ss_pred eeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc
Confidence 57899975 68888732111 14777776642 24554444 23456788888853 68
Q ss_pred EEEEEee-----------------CCEEEEEECCCC------c-------------EEEEEecC--CCceeEEeeCC---
Q 019103 162 LFQVTWL-----------------QKTGFIYDQNNL------N-------------KLEEFTHQ--MKDGWGLATDG--- 200 (346)
Q Consensus 162 LY~ltw~-----------------~~~v~V~D~~tl------~-------------~i~ti~~~--~peGwGLt~Dg--- 200 (346)
||+++-. .++|+.+|++.. + ...-+.++ .|.|.++.++.
T Consensus 152 LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~ 231 (463)
T 2wg3_C 152 LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDI 231 (463)
T ss_dssp EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSST
T ss_pred EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCc
Confidence 9998643 367999998762 0 12234555 35555556542
Q ss_pred --C-EEEEEC--CC----CeEEEEeCCC-CcEEEEEEeccCCeee-eeceeeEee--------CCEEEEEecCCCeEEEE
Q 019103 201 --K-VLFGSD--GS----SMLYQIDPQT-LKVIRKDIVRYKGREV-RNLNELEFI--------KGEVWANVWQTDCIARI 261 (346)
Q Consensus 201 --~-~LyvSd--Gs----~~l~vIDp~T-~kvi~~I~V~~~G~pv-~~lNELE~~--------~G~LyaNv~~sn~I~vI 261 (346)
+ ++|++| |. ++|..+-+-. +-.. -++-..+... ..+.-+.+. .|.+|+..|. ..|.++
T Consensus 232 ~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~ 308 (463)
T 2wg3_C 232 NINLTILCSDSNGKNRSSARILQIIKGKDYESE--PSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTL 308 (463)
T ss_dssp TCSEEEEEECC------CEEEEEEC----CCSC--CCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEE
T ss_pred ccceEEEecccCCCCCCCCeEeeeccCCCCCCC--CCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEE
Confidence 2 788898 32 2344442111 0000 0000000000 001112222 2457777775 668888
Q ss_pred eCCCCeEE-EEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEec------CCCCcEEEEE
Q 019103 262 SHEDGVVL-GWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTG------KLWPKLYEIN 318 (346)
Q Consensus 262 D~~TG~Vv-~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTG------K~Wp~l~ev~ 318 (346)
..+.+... ..-.+ +.+...........-|-+++.+|||..++++. +.-++||+|.
T Consensus 309 ~~~~~~~~~~~~~~--~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 309 QQSPVTKQWQEKPL--CLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp EC-----CCEEEEE--CEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred EeCCCCceeeEEEe--ecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 76554321 11111 00000000001123578999999987666663 2467899996
No 342
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=90.88 E-value=3.6 Score=42.55 Aligned_cols=139 Identities=19% Similarity=0.171 Sum_probs=88.2
Q ss_pred EEEEECCCCcEEEEEecC------C----C----ceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeee
Q 019103 172 GFIYDQNNLNKLEEFTHQ------M----K----DGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRN 237 (346)
Q Consensus 172 v~V~D~~tl~~i~ti~~~------~----p----eGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~ 237 (346)
.++||. +++++-..+.. . + -||--.+||..++.. | ..++.+|. .++++.++....+-...+
T Consensus 177 ~~i~D~-~G~lrW~~~~~~~~~~~~~~~~~~g~l~~~~g~~nG~l~~g~-G-~~i~elD~-~Gkvv~~~~lp~g~~~~H- 251 (571)
T 3elq_A 177 TFIVDT-EGEYRWWLDQDTFYDGRDRDINKRGYLMGIRETPRGTFTAVQ-G-QHWYEFDM-MGQVLEDHKLPRGFADAT- 251 (571)
T ss_dssp EEEECT-TSCEEEECCGGGTCCSSSCCGGGCSCCEEEEECTTSCEEEEE-B-TEEEEECT-TCCEEEEEECCTTEECBC-
T ss_pred eEEEcC-CCcEEEEeCcccccccceeeccCCCeEEEEEecCCCCEEEec-C-cEEEEECC-CCcEEEEEECCCCccccc-
Confidence 689994 67777766542 0 1 134445677777764 3 46999996 688888777743101111
Q ss_pred ceeeE-eeCCEEEEEe--------------cCCCeEEEEeCCCCeEEEEEECCchhhhhh-------------------h
Q 019103 238 LNELE-FIKGEVWANV--------------WQTDCIARISHEDGVVLGWVLLPNLRERLV-------------------A 283 (346)
Q Consensus 238 lNELE-~~~G~LyaNv--------------~~sn~I~vID~~TG~Vv~~I~l~~l~~~~~-------------------~ 283 (346)
-|.. ..+|.+++.+ +..+.|..|| +||+|+-.+++.+..+... .
T Consensus 252 -HD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~ 329 (571)
T 3elq_A 252 -HESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAH 329 (571)
T ss_dssp -SCEEECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CC
T ss_pred -cceEEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEEEEhHHccCcccccchhccccccccccccccc
Confidence 1332 3366544422 2367899999 9999999997643321100 0
Q ss_pred cc-------------------CCCCceeeEEEEeCCCCEEEEecCCCCcEEEEE
Q 019103 284 AG-------------------YNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEIN 318 (346)
Q Consensus 284 ~~-------------------~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~ 318 (346)
++ ..+-.-.|.|.|++.++.+.|..++- .|+.|.
T Consensus 330 ~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~-~I~~Id 382 (571)
T 3elq_A 330 AGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQ-GVVKIG 382 (571)
T ss_dssp CSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTT-EEEEEE
T ss_pred cccccccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCcc-EEEEEc
Confidence 00 01223589999999889999999999 999986
No 343
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=85.97 E-value=16 Score=37.66 Aligned_cols=75 Identities=17% Similarity=0.248 Sum_probs=53.4
Q ss_pred EEeeCCCEEEEE--------CC------CCeEEEEeCCCCcEEEEEEeccC--------------------------C--
Q 019103 195 GLATDGKVLFGS--------DG------SSMLYQIDPQTLKVIRKDIVRYK--------------------------G-- 232 (346)
Q Consensus 195 GLt~Dg~~LyvS--------dG------s~~l~vIDp~T~kvi~~I~V~~~--------------------------G-- 232 (346)
-.+++|..|+.+ || .+.|..|| +|++++-.+...++ |
T Consensus 255 ~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~I~EVD-~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~ 333 (571)
T 3elq_A 255 IETPNGTVLLRVGKSNYRRDDGVHVTTIRDHILEVD-KSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQ 333 (571)
T ss_dssp EECTTSCEEEEEEETTEECTTSCEECCCSCEEEEEC-TTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCB
T ss_pred EEcCCCcEEEEEecccccCCCCcccceeccEEEEEC-CCCCEEEEEEhHHccCcccccchhccccccccccccccccccc
Confidence 356677777643 22 55899999 99999988876431 0
Q ss_pred ------------------eeeeeceeeEee--CCEEEEEecCCCeEEEEeCCCCeEEEEE
Q 019103 233 ------------------REVRNLNELEFI--KGEVWANVWQTDCIARISHEDGVVLGWV 272 (346)
Q Consensus 233 ------------------~pv~~lNELE~~--~G~LyaNv~~sn~I~vID~~TG~Vv~~I 272 (346)
.--.++|.+++. ++.+.+..=.+ .|..||. +|+|+=++
T Consensus 334 ~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~d~~dd~~liSsR~~-~I~~Id~-tG~V~W~L 391 (571)
T 3elq_A 334 AKLEPDTPFGDALGVGPGRNWAHVNSIAYDAKDDSIILSSRHQ-GVVKIGR-DKQVKWIL 391 (571)
T ss_dssp CCCCTTCCSSSSSCSSTTSCSCCEEEEEEETTTTEEEEEETTT-EEEEEET-TSCEEEEE
T ss_pred cccccccccccccccCCCCCCcEecceeEcCCCCEEEEECCcc-EEEEEcC-CCcEEEEE
Confidence 111358888887 45788888778 8999996 99986655
No 344
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=85.50 E-value=13 Score=38.95 Aligned_cols=152 Identities=16% Similarity=0.101 Sum_probs=82.5
Q ss_pred eeEE-EecCC-E-EE-EEcCCCCCCeEEEEECCCCcEEEEeccCCCeeE-------EEEEE-eCCEEEEEE-e-------
Q 019103 108 QGLL-YAEND-T-LF-ESTGLYGRSSVRRVALETGKVEAINQMEGSYFG-------EGLTL-LGEKLFQVT-W------- 167 (346)
Q Consensus 108 qGL~-~~~d~-~-Ly-eStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~Fg-------eGit~-~g~~LY~lt-w------- 167 (346)
.|+. +++|+ + || +|.|..+...|+++|++|++.+.....+...+| .+++. +++.+|+.+ +
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 7887 78887 3 33 677756778899999999998643211211111 12233 567777764 2
Q ss_pred --eCCEEEEEECCCCcEEEE--EecC---CCceeEEeeCCC----EEEEEC--C--CCeEEEEeCCC--CcEEEEEEecc
Q 019103 168 --LQKTGFIYDQNNLNKLEE--FTHQ---MKDGWGLATDGK----VLFGSD--G--SSMLYQIDPQT--LKVIRKDIVRY 230 (346)
Q Consensus 168 --~~~~v~V~D~~tl~~i~t--i~~~---~peGwGLt~Dg~----~LyvSd--G--s~~l~vIDp~T--~kvi~~I~V~~ 230 (346)
...+++.--.-|-..-.+ |.-+ .--+-+.+.|++ +++++. + .+.++++|+.. .+ ..++.+..
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 235555554433211111 1111 112233566777 356642 2 57899998753 33 23333322
Q ss_pred CCeeeeeceeeEeeCCEEEEE---ec-------CCCeEEEEeCCCC
Q 019103 231 KGREVRNLNELEFIKGEVWAN---VW-------QTDCIARISHEDG 266 (346)
Q Consensus 231 ~G~pv~~lNELE~~~G~LyaN---v~-------~sn~I~vID~~TG 266 (346)
+-.. ++..+|.+|+- +| ....|+++|.+++
T Consensus 291 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 330 (711)
T 4hvt_A 291 DATL------QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDL 330 (711)
T ss_dssp TCEE------EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGG
T ss_pred cceE------eeeECCEEEEEECcccccccccCCCCeEEEEECCcc
Confidence 1111 45678888872 33 4566888887664
No 345
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.91 E-value=30 Score=36.30 Aligned_cols=194 Identities=14% Similarity=0.093 Sum_probs=102.5
Q ss_pred eeEEEecCCEEEEEcCCC--------CCCeEEEEECCCC----cEEEEeccCCCeeEEEEEEeCC----EEEEE---Eee
Q 019103 108 QGLLYAENDTLFESTGLY--------GRSSVRRVALETG----KVEAINQMEGSYFGEGLTLLGE----KLFQV---TWL 168 (346)
Q Consensus 108 qGL~~~~d~~LyeStGly--------g~s~V~~iDl~Tg----kv~~~~~l~~~~FgeGit~~g~----~LY~l---tw~ 168 (346)
.++...+++.+|+++-.- -..+|..+-.-|. +++-.-+-..-.++.+.+.+++ ++++. ++.
T Consensus 188 ~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 267 (711)
T 4hvt_A 188 TYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFY 267 (711)
T ss_dssp CCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSS
T ss_pred ceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccC
Confidence 344666567888875210 0235666655443 2222222222233444455555 35554 456
Q ss_pred CCEEEEEECCCC-cEEEEEecCCCceeE-EeeCCCEEEE-E--C--------CCCeEEEEeCCCCc-------EEEEEEe
Q 019103 169 QKTGFIYDQNNL-NKLEEFTHQMKDGWG-LATDGKVLFG-S--D--------GSSMLYQIDPQTLK-------VIRKDIV 228 (346)
Q Consensus 169 ~~~v~V~D~~tl-~~i~ti~~~~peGwG-Lt~Dg~~Lyv-S--d--------Gs~~l~vIDp~T~k-------vi~~I~V 228 (346)
.+.++++|.++- ..+.++..+ ...+ +...+++||+ + | ...+|..+|.+++. .-..+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKINMP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp CEEEEEEECSSSSCEEEECCSC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred ceeEEEEcCCCCCCcceEeecC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 688999997631 123444443 3334 3555667777 2 3 25579999987652 1122223
Q ss_pred ccCCeeeeeceeeEeeCCEEEEEecC--CCeEEEEeCCCCeE-EEE-EECCchhhhhhhccCCCCceeeEEEEeCCCCEE
Q 019103 229 RYKGREVRNLNELEFIKGEVWANVWQ--TDCIARISHEDGVV-LGW-VLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRI 304 (346)
Q Consensus 229 ~~~G~pv~~lNELE~~~G~LyaNv~~--sn~I~vID~~TG~V-v~~-I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~L 304 (346)
..... .+..+.+.+++|+++.-. ...|.++|+++|+. +.. ++++.. ....+...+++++++
T Consensus 346 ~~~~~---~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~------------~~~~~~~~~~~~~~~ 410 (711)
T 4hvt_A 346 PTANE---VFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQ------------NAIFGMSSYEEEEEA 410 (711)
T ss_dssp CCTTE---EEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCST------------TCEEEEECCTTCSCE
T ss_pred CCCCC---eEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCC------------eEEEEEeecCcCCEE
Confidence 22222 344566777777765432 34688999988862 233 544221 123455566777777
Q ss_pred EEecCCC---CcEEEEE
Q 019103 305 FVTGKLW---PKLYEIN 318 (346)
Q Consensus 305 fVTGK~W---p~l~ev~ 318 (346)
+++.... +.+|.+.
T Consensus 411 ~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 411 LITIENSIVPPTIYLWV 427 (711)
T ss_dssp EEEEECSSSCCEEEEEC
T ss_pred EEEEecCCCCCEEEEEe
Confidence 7665443 4555553
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=78.36 E-value=16 Score=37.77 Aligned_cols=62 Identities=23% Similarity=0.369 Sum_probs=39.4
Q ss_pred CCceeEEeeCCCEEEEECCC------------CeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEee-C-CEEEEEecCC
Q 019103 190 MKDGWGLATDGKVLFGSDGS------------SMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFI-K-GEVWANVWQT 255 (346)
Q Consensus 190 ~peGwGLt~Dg~~LyvSdGs------------~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~-~-G~LyaNv~~s 255 (346)
.|++..++++|..++..|++ |.+.+.+|.+.++.+-..+ -.|.++.- +.+. | ..||+|+..=
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG---~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTG---ISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEE---EEECTTSSEEEEEEEST
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcC---eeECCCCCEEEEEEECC
Confidence 46888888888744447763 6799999999887644333 23333221 2333 3 4899998653
No 347
>3j20_E 30S ribosomal protein S4E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=77.42 E-value=10 Score=35.07 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=30.2
Q ss_pred EEEeccCCeeeeeceeeEeeCCE--EE----EEecCCCeEEEEeCCCCeEEEEEEC
Q 019103 225 KDIVRYKGREVRNLNELEFIKGE--VW----ANVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 225 ~I~V~~~G~pv~~lNELE~~~G~--Ly----aNv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
.+.++..|.|. |-..||+ +| -.....++-++||.++++++..|.+
T Consensus 129 ~k~~~~~G~~~-----l~~hDgr~i~~p~~~d~~ik~~Dtv~idl~~~kI~d~ikf 179 (243)
T 3j20_E 129 NKRMIKGARVQ-----LNFHDGTNHIVSIAEKDNYFTSYTVLMKVPEREILEVLPF 179 (243)
T ss_dssp CEEEETTTEEE-----ECCSSCCCEECSSSSCSSCSSCEEEEEETTTTEEEEEEEC
T ss_pred eeEEccCCeeE-----EEecCCceEEcccccCCCcccCCEEEEECCCCCeeeEEec
Confidence 34444556662 3345553 44 2345688899999999999999977
No 348
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.84 E-value=6.4 Score=40.90 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=43.4
Q ss_pred ceeEEEecCCEEEEEc-CCC---------CCCeEEEEECCCCcEEEEeccC--CCeeEEEEEEeCCEEEEEE
Q 019103 107 TQGLLYAENDTLFEST-GLY---------GRSSVRRVALETGKVEAINQME--GSYFGEGLTLLGEKLFQVT 166 (346)
Q Consensus 107 TqGL~~~~d~~LyeSt-Gly---------g~s~V~~iDl~Tgkv~~~~~l~--~~~FgeGit~~g~~LY~lt 166 (346)
.-+|.|+++|.||++| +.| +.+.|..+|+++|++......+ .++=|..++++++.||+..
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3689999999999954 322 3458999999999987766433 3454555555678999885
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.35 E-value=58 Score=33.59 Aligned_cols=55 Identities=16% Similarity=0.280 Sum_probs=40.2
Q ss_pred eEee-CCEEEE-Eec-----------CCCeEEEEeCCCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEe
Q 019103 241 LEFI-KGEVWA-NVW-----------QTDCIARISHEDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVT 307 (346)
Q Consensus 241 LE~~-~G~Lya-Nv~-----------~sn~I~vID~~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVT 307 (346)
|.+. .|.||+ ..- ..|.+.++++.+|++....-. |.+.-+-|++|+||+++|||.
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~------------P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG------------PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC------------CTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC------------CCCccCcCeeECCCCCEEEEE
Confidence 4444 478886 332 236799999999998654422 345578999999999999998
No 350
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=71.89 E-value=5.3 Score=36.84 Aligned_cols=109 Identities=18% Similarity=0.202 Sum_probs=60.8
Q ss_pred eeEEeeCCCEEEEECCCCeEEEEeCCC-------CcEEEEEE-eccCCeeeeeceeeEee-CCEEEEEecCCCeEEEEeC
Q 019103 193 GWGLATDGKVLFGSDGSSMLYQIDPQT-------LKVIRKDI-VRYKGREVRNLNELEFI-KGEVWANVWQTDCIARISH 263 (346)
Q Consensus 193 GwGLt~Dg~~LyvSdGs~~l~vIDp~T-------~kvi~~I~-V~~~G~pv~~lNELE~~-~G~LyaNv~~sn~I~vID~ 263 (346)
-.++.|||. ||+- .+.+|+.+|+.+ .. -.+|- ++.++ +. .+-++ +|.||+. .+..|.++|+
T Consensus 45 ~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~--F~---a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 45 FLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQ--FQ---FLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp EEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGG--CS---EEEECTTSCEEEE--ETTEEEEESC
T ss_pred eEEECCCcc-EEEE-eCCeEEEECCCCCCccccccc-ccEeccccccc--ce---EEEECCCCCEEEe--CCCEEEEeCC
Confidence 456778666 8886 556899999976 32 22221 12222 22 23233 6899988 4689999999
Q ss_pred CCCeEEEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEee
Q 019103 264 EDGVVLGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLRE 321 (346)
Q Consensus 264 ~TG~Vv~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~ 321 (346)
-+..--.|+.-+.. +.. ..-....-|+++|+|...-|+ + .++|+ .+.|
T Consensus 115 P~~~~~~Wl~~a~~---vg~---~gw~~~~~lff~p~G~Lyav~-d--g~lyr-~~~P 162 (236)
T 1tl2_A 115 PQSDTDNWIARATE---VGS---GGWSGFKFLFFHPNGYLYAVH-G--QQFYK-ALPP 162 (236)
T ss_dssp CCSTTCCHHHHSEE---EEC---SSGGGEEEEEECTTSCEEEEE-T--TEEEE-ECCC
T ss_pred CcCCCCceeccccE---ecc---CCCCceEEEEECCCceEEEEe-C--CcEEe-cCCC
Confidence 65322122211000 000 111234779999998866677 3 33776 4444
No 351
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=63.43 E-value=35 Score=31.35 Aligned_cols=66 Identities=12% Similarity=0.053 Sum_probs=43.5
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCC-------CcEEEEe-ccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEE
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALET-------GKVEAIN-QMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYD 176 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~T-------gkv~~~~-~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D 176 (346)
.| .-|+|+|||.||.-.. | .|.++|..+ +. ..++ ..+-..|+.-..--++.||.+ .++.++.+|
T Consensus 42 ~~-~~laf~P~G~LYaV~~--G--~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NF-KFLFLSPGGELYGVLN--D--KIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TC-SEEEECTTSCEEEEET--T--EEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cc-eeEEECCCccEEEEeC--C--eEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 44 4899999999997522 3 899999877 32 2222 112233654333345789999 569999999
Q ss_pred CC
Q 019103 177 QN 178 (346)
Q Consensus 177 ~~ 178 (346)
+-
T Consensus 114 pP 115 (236)
T 1tl2_A 114 PP 115 (236)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 352
>3kbg_A 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}
Probab=62.90 E-value=32 Score=31.21 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=40.5
Q ss_pred CCeEEEEeCCC--CcE--EEEEEeccCCeeeeeceeeEeeCCE--EEE-EecCCCeEEEEeCCCCeEEEEEEC
Q 019103 209 SSMLYQIDPQT--LKV--IRKDIVRYKGREVRNLNELEFIKGE--VWA-NVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 209 s~~l~vIDp~T--~kv--i~~I~V~~~G~pv~~lNELE~~~G~--Lya-Nv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
--.++.|+++. +|+ +.++.++..|.|. |-..||+ +|- .....++-++||.+|++++..|.+
T Consensus 72 rf~~~~I~~eea~~KLcKV~~k~~~~~G~~~-----l~~HDGrti~~pd~~ik~~Dtv~idl~~~kI~d~ikf 139 (213)
T 3kbg_A 72 ALVLMKETKERASMKLLKVRSKVIAPGNRIQ-----LGTHDGRTFITDDKSIKVGDVLAVSVPDMKISEIIKM 139 (213)
T ss_dssp CEEEEECCTTGGGEEEEEEEEEEEEGGGEEE-----EEETTSCEEEECCTTCCTTCEEEEETTTCCEEEEECC
T ss_pred cEEEEEeChhHccceEEEEEEEEEecCCeeE-----EEecCccEEEcCCCCcccCCEEEEECCCCceeeEEEc
Confidence 33566677644 343 3455666667773 4456774 442 335578889999999999999966
No 353
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=61.13 E-value=1e+02 Score=31.23 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=57.5
Q ss_pred EEECCCCcEEEEeccC-----CCeeEEEEEEe----C---CEEEEEEee----CCEEEEEECCCCcEEE-EEecC--CCc
Q 019103 132 RVALETGKVEAINQME-----GSYFGEGLTLL----G---EKLFQVTWL----QKTGFIYDQNNLNKLE-EFTHQ--MKD 192 (346)
Q Consensus 132 ~iDl~Tgkv~~~~~l~-----~~~FgeGit~~----g---~~LY~ltw~----~~~v~V~D~~tl~~i~-ti~~~--~pe 192 (346)
++|+.+|++..+.-.+ .--|+ .+. | +..|.+... -+.+..+|..|++... .+..+ ..|
T Consensus 379 rl~l~~g~~~~~~l~~~~~~~~~EfP---~In~~~~Gr~~Ry~Y~~~~~~~~~~~~l~K~D~~tg~~~~~~~g~~~~~~E 455 (529)
T 3npe_A 379 RLDARTGRSTRRAVLPPSQQVNLEVG---MVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTGELTKFEYGEGRFGGE 455 (529)
T ss_dssp EECTTTCCEEEEESSCSSSCCCEEEE---EECGGGTTSCCSEEEEEECCSTTSCCEEEEEETTTCCEEEEECCTTBCCCC
T ss_pred EEcCCCCCEEeEEecccccCccccCc---eEChhHcCCccceEEEeccCCCCCcceEEEEecCCCceEEEEcCCCccccC
Confidence 3588899887665442 11233 222 1 468877643 3679999999988532 22110 012
Q ss_pred eeEE----------eeCCCEE--EEEC---CCCeEEEEeCCCCcEEEEEEecc
Q 019103 193 GWGL----------ATDGKVL--FGSD---GSSMLYQIDPQTLKVIRKDIVRY 230 (346)
Q Consensus 193 GwGL----------t~Dg~~L--yvSd---Gs~~l~vIDp~T~kvi~~I~V~~ 230 (346)
..=+ ..|..+| +|-| +.+.|.++|+++++.++++.+..
T Consensus 456 PvFVPrp~~~~~~~~EDDG~lLs~V~d~~~~~S~LlILDA~~l~~vArv~LP~ 508 (529)
T 3npe_A 456 PCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAADMRLEATVQLPS 508 (529)
T ss_dssp CEEEECCSCSSSSCCTTCEEEEEEEEBSSCCCEEEEEEETTTTEEEEEEEESS
T ss_pred CEeeeCCCCCCCCCCCCCcEEEEEEEECCCCcEEEEEEeCCCCccceEEECCC
Confidence 2212 2233443 4445 36789999999999999998854
No 354
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=57.43 E-value=25 Score=35.63 Aligned_cols=14 Identities=7% Similarity=0.131 Sum_probs=10.8
Q ss_pred CeEEEEECCCCcEE
Q 019103 128 SSVRRVALETGKVE 141 (346)
Q Consensus 128 s~V~~iDl~Tgkv~ 141 (346)
+.|.++|+.||+..
T Consensus 445 ~~l~K~D~~tg~~~ 458 (533)
T 3kvc_A 445 DRLCKLNVKTKETW 458 (533)
T ss_dssp EEEEEEETTTCCEE
T ss_pred ceeEEEEcCCCCEE
Confidence 46888898888754
No 355
>1s1d_A Apyrase; adpase, five-blade beta propeller, calcium-binding protein, nucleotide-binding motif, hydrolase; HET: GP2; 1.60A {Homo sapiens} SCOP: b.67.3.1 PDB: 1s18_A* 2h2n_A 2h2u_A
Probab=57.27 E-value=74 Score=30.63 Aligned_cols=92 Identities=24% Similarity=0.351 Sum_probs=56.8
Q ss_pred EEEECCCCeEEE-EeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCchhhhh
Q 019103 203 LFGSDGSSMLYQ-IDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTDCIARISHEDGVVLGWVLLPNLRERL 281 (346)
Q Consensus 203 LyvSdGs~~l~v-IDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~l~~~~ 281 (346)
|..+...+++.+ +|++..++...+.-+..|.+ |.||...||+||.-.=.+..|..|. .++++-|+-+++--+
T Consensus 64 L~~~~~~~~~si~w~~~~~~l~S~~~~~GRGmE---LSELv~FngkLyt~DDRTGiVyei~--~~~~iPwvIL~dGdG-- 136 (331)
T 1s1d_A 64 LTLSDSGDKVAVEWDKDHGVLESHLAEKGRGME---LSDLIVFNGKLYSVDDRTGVVYQIE--GSKAVPWVILSDGDG-- 136 (331)
T ss_dssp EEEETTSSCEEEEECSSCEEEEESCCBTTBCCC---EEEEEEETTEEEEEETTTCEEEEEE--TTEEEEEEECEETTT--
T ss_pred EEECCCCCeEEEEEcCCceEEEeccccCCCCce---eehheeECCEEeeeeCCCceEEEEe--CCcEEEEEEEecCCC--
Confidence 334333333333 37655555444444333444 4589899999998887899999995 788888886643221
Q ss_pred hhccCCCCceeeE-----EEEeCCCCEEEEe--cCCC
Q 019103 282 VAAGYNGIDVLNG-----IAWDSNRNRIFVT--GKLW 311 (346)
Q Consensus 282 ~~~~~~~~~vlNG-----IA~d~~~~~LfVT--GK~W 311 (346)
+.-.| .+. .++.|||- ||-|
T Consensus 137 --------~~~kGfK~EWaTV--Kd~~LyVGs~GKEw 163 (331)
T 1s1d_A 137 --------TVEKGFKAEWLAV--KDERLYVGGLGKEW 163 (331)
T ss_dssp --------TEEEECCCCEEEE--ETTEEEEECCCSCE
T ss_pred --------CcCcccceeeEEE--ECCEEEEeecCcee
Confidence 11112 222 35799998 9988
No 356
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=50.38 E-value=73 Score=32.88 Aligned_cols=98 Identities=21% Similarity=0.194 Sum_probs=58.3
Q ss_pred CEEEEEECCC---CcEEEEEecC----CCceeE---Ee--eCCCEE-EEECC------CCeEEEEeCCCCcEEEEEEecc
Q 019103 170 KTGFIYDQNN---LNKLEEFTHQ----MKDGWG---LA--TDGKVL-FGSDG------SSMLYQIDPQTLKVIRKDIVRY 230 (346)
Q Consensus 170 ~~v~V~D~~t---l~~i~ti~~~----~peGwG---Lt--~Dg~~L-yvSdG------s~~l~vIDp~T~kvi~~I~V~~ 230 (346)
+-+|.+|..+ -+++-+|+.. +++-|+ ++ .+++++ ++.+| ...|+++|++|++++++|.+..
T Consensus 164 ~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~tG~li~~i~~~~ 243 (570)
T 3hx6_A 164 KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMETGAITRKLEVTG 243 (570)
T ss_dssp SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTTCCEEEEEEECC
T ss_pred cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCCCceEEEEecCC
Confidence 3466666443 5666666621 212222 22 357764 44666 4589999999999999999853
Q ss_pred CCeeeeeceeeEee----C---CEEEEEecCCCeEEEEeCCCCeE
Q 019103 231 KGREVRNLNELEFI----K---GEVWANVWQTDCIARISHEDGVV 268 (346)
Q Consensus 231 ~G~pv~~lNELE~~----~---G~LyaNv~~sn~I~vID~~TG~V 268 (346)
......-|...... | +++||... ...|.++|..+...
T Consensus 244 ~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 244 RTGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAGKV 287 (570)
T ss_dssp STTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCSSC
T ss_pred CCccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCCCc
Confidence 10000011122222 2 47999884 77899999987653
No 357
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=50.32 E-value=2.3e+02 Score=29.28 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=62.0
Q ss_pred CCCeEEEEECCCCcEEEEeccCCCee------E-EEEEEeC---CEEEEEEe------------------eCC-------
Q 019103 126 GRSSVRRVALETGKVEAINQMEGSYF------G-EGLTLLG---EKLFQVTW------------------LQK------- 170 (346)
Q Consensus 126 g~s~V~~iDl~Tgkv~~~~~l~~~~F------g-eGit~~g---~~LY~ltw------------------~~~------- 170 (346)
|.+.|..|+++ |+.+-++.++.+.. . .-..+++ .+|++.|. ++.
T Consensus 149 g~~~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~G 227 (591)
T 2zux_A 149 GDVLIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSG 227 (591)
T ss_dssp CCCEEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSS
T ss_pred CCcEEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecC
Confidence 34689999997 88888887764321 1 1122233 47888864 333
Q ss_pred --EEEEEECCCCcEEEEEecCCCc----ee-------------EEee-CCC--EEEEECC---CCeEEEEeCCCCcEEEE
Q 019103 171 --TGFIYDQNNLNKLEEFTHQMKD----GW-------------GLAT-DGK--VLFGSDG---SSMLYQIDPQTLKVIRK 225 (346)
Q Consensus 171 --~v~V~D~~tl~~i~ti~~~~pe----Gw-------------GLt~-Dg~--~LyvSdG---s~~l~vIDp~T~kvi~~ 225 (346)
-++|+|-.|++.+.++++.-+. +| +++. ||+ .++++.| ...|..+|-++.++..+
T Consensus 228 pEyL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~ 307 (591)
T 2zux_A 228 PEYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKL 307 (591)
T ss_dssp CCEEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEE
T ss_pred CcEEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEE
Confidence 4899999999999999984111 22 3333 554 4566654 22466666666555554
Q ss_pred EEe
Q 019103 226 DIV 228 (346)
Q Consensus 226 I~V 228 (346)
...
T Consensus 308 W~~ 310 (591)
T 2zux_A 308 WTL 310 (591)
T ss_dssp EEE
T ss_pred EEe
Confidence 444
No 358
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=49.81 E-value=3e+02 Score=30.39 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=65.9
Q ss_pred CCEEEEEEeeCCEEEEEECCCCcEEEEEecCCCceeE---EeeCCCEEEEECCCCeEEEE--eCCCCcEEEEEEeccCCe
Q 019103 159 GEKLFQVTWLQKTGFIYDQNNLNKLEEFTHQMKDGWG---LATDGKVLFGSDGSSMLYQI--DPQTLKVIRKDIVRYKGR 233 (346)
Q Consensus 159 g~~LY~ltw~~~~v~V~D~~tl~~i~ti~~~~peGwG---Lt~Dg~~LyvSdGs~~l~vI--Dp~T~kvi~~I~V~~~G~ 233 (346)
++.+.|.| ++.+..+|.+..+.+.+.+.+ .|-. .+.++..+.++.| +.|..+ |...++...++....
T Consensus 483 ~~~ivQVt--~~~Irli~~~~~~~~~~w~~p--~~~~I~~As~n~~~vvva~g-~~l~~fel~~~~L~~~~~~~l~~--- 554 (1158)
T 3ei3_A 483 HQQLIQIT--SASVRLVSQEPKALVSEWKEP--QAKNISVASCNSSQVVVAVG-RALYYLQIHPQELRQISHTEMEH--- 554 (1158)
T ss_dssp TTEEEEEE--SSCEEEEESSSCCEEEEECCT--TCCCCCEEEECSSEEEEEET-TEEEEEEEETTEEEEEEEEECSS---
T ss_pred CCeEEEEe--cCEEEEEECCCCeEEEEEECC--CCCEEEEEEeCCCEEEEEEC-CEEEEEEeeCCceeeecccCCCC---
Confidence 56788887 677888898777777777643 3322 2445567777654 455554 433334444444422
Q ss_pred eeeeceeeEee------CCEEEEEecCCCeEEEEeCCCCeEEEEEEC
Q 019103 234 EVRNLNELEFI------KGEVWANVWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 234 pv~~lNELE~~------~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l 274 (346)
++.-+ .+... ...+-|..|.+++|.+++..+.+.+....+
T Consensus 555 evscl-~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L 600 (1158)
T 3ei3_A 555 EVACL-DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEML 600 (1158)
T ss_dssp CEEEE-ECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred ceEEE-EeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEEC
Confidence 22111 11111 135778889999999999999998887766
No 359
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=43.83 E-value=66 Score=32.56 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=41.5
Q ss_pred EEEEcCC--CCCCeEEEEECCCCcEEEEeccCCCeeEEEEEE----------eCCEEEEE--Ee----eCCEEEEEECCC
Q 019103 118 LFESTGL--YGRSSVRRVALETGKVEAINQMEGSYFGEGLTL----------LGEKLFQV--TW----LQKTGFIYDQNN 179 (346)
Q Consensus 118 LyeStGl--yg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~----------~g~~LY~l--tw----~~~~v~V~D~~t 179 (346)
.|-++.. ..-+.|.++|+.||++..-..=+..+.+|-+-+ ..+.-|++ .+ ....+.|+|+++
T Consensus 418 ~Y~~~~~~~~~~~~l~K~D~~tg~~~~~~~g~~~~~~EPvFVPrp~~~~~~~~EDDG~lLs~V~d~~~~~S~LlILDA~~ 497 (529)
T 3npe_A 418 AYLAVAEPWPKVSGFAKVDLSTGELTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAAD 497 (529)
T ss_dssp EEEEECCSTTSCCEEEEEETTTCCEEEEECCTTBCCCCCEEEECCSCSSSSCCTTCEEEEEEEEBSSCCCEEEEEEETTT
T ss_pred EEEeccCCCCCcceEEEEecCCCceEEEEcCCCccccCCEeeeCCCCCCCCCCCCCcEEEEEEEECCCCcEEEEEEeCCC
Confidence 5655431 123689999999998643321122222333222 11233332 23 234699999999
Q ss_pred CcEEEEEecC
Q 019103 180 LNKLEEFTHQ 189 (346)
Q Consensus 180 l~~i~ti~~~ 189 (346)
++.++++..+
T Consensus 498 l~~vArv~LP 507 (529)
T 3npe_A 498 MRLEATVQLP 507 (529)
T ss_dssp TEEEEEEEES
T ss_pred CccceEEECC
Confidence 9999998875
No 360
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=38.75 E-value=1.7e+02 Score=24.27 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=43.4
Q ss_pred EEecCCCCcceeEEEecCCEEEEE-------cCCCCCCeEE--EEECCCCcEEEEe-ccCCCeeEEEEEEeCCEEEEEEe
Q 019103 98 EFPHDPRAFTQGLLYAENDTLFES-------TGLYGRSSVR--RVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~d~~LyeS-------tGlyg~s~V~--~iDl~Tgkv~~~~-~l~~~~FgeGit~~g~~LY~ltw 167 (346)
+||.....+-.|..+--+|.+|.- .|..|...++ ..|+.||++.... +.+.. + + .+...++=||..+
T Consensus 4 t~~i~a~~lkkG~~i~~~g~p~~Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~-v-e-~~~ve~~~~qylY 80 (138)
T 1iz6_A 4 KTKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAE-V-D-VPIIDKKTAQVIA 80 (138)
T ss_dssp EEEEEGGGCCTTSEEEETTEEEEEEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSE-E-E-EECCEEEEEEEEE
T ss_pred eEEEEHHHccCCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCE-E-e-eceEEEEEEEEEE
Confidence 566666666678877767765431 3444555444 4688999876544 33322 1 1 1222333344433
Q ss_pred eCCE-EEEEECCCCcEE
Q 019103 168 LQKT-GFIYDQNNLNKL 183 (346)
Q Consensus 168 ~~~~-v~V~D~~tl~~i 183 (346)
.++. ....|.+|.+++
T Consensus 81 ~dg~~~~fMD~etyeq~ 97 (138)
T 1iz6_A 81 ITPDTVQIMDMETYETF 97 (138)
T ss_dssp ECSSEEEEECTTTCCEE
T ss_pred eCCCEEEEEeCCCCceE
Confidence 3333 344466666543
No 361
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=37.26 E-value=58 Score=32.52 Aligned_cols=20 Identities=20% Similarity=0.419 Sum_probs=14.5
Q ss_pred CeEEEEECCCCcEEEEeccCC
Q 019103 128 SSVRRVALETGKVEAINQMEG 148 (346)
Q Consensus 128 s~V~~iDl~Tgkv~~~~~l~~ 148 (346)
+.|.++|+.||+.. ....++
T Consensus 401 ~~l~K~D~~tg~~~-~~~~g~ 420 (490)
T 2biw_A 401 QAILKVDLESGTET-LRSFAP 420 (490)
T ss_dssp CEEEEEETTTTEEE-EEECTT
T ss_pred CeEEEEECCCCCEE-EEECCC
Confidence 57999999999763 344443
No 362
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=37.10 E-value=1.7e+02 Score=24.12 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=43.0
Q ss_pred EEecCCCCcceeEEEecCCEEEEE-------cCCCCCC--eEEEEECCCCcEEEEe-ccCCCeeEEEEEEeCCEEEEEEe
Q 019103 98 EFPHDPRAFTQGLLYAENDTLFES-------TGLYGRS--SVRRVALETGKVEAIN-QMEGSYFGEGLTLLGEKLFQVTW 167 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~d~~LyeS-------tGlyg~s--~V~~iDl~Tgkv~~~~-~l~~~~FgeGit~~g~~LY~ltw 167 (346)
|+|.....+-.|..+--+|.+|.- .|..|.. ++...|+.||++.... +.+. .+ + .+...++=||..+
T Consensus 6 t~~i~~~~lrkG~~i~~~g~p~~Vve~~~~KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~-kv-e-~~~ve~~~~qylY 82 (136)
T 1bkb_A 6 TKYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDA-QV-E-VPIIEKFTAQILS 82 (136)
T ss_dssp CEEEEGGGCCTTCEEEETTEEEEEEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTS-EE-E-ECCCEEEEEEEEE
T ss_pred EEEEEHHHccCCCEEEECCEEEEEEEEEEecCCCCCceEEEEEEEECCCCCeEEEEEcCCC-Ee-e-eceEEEEEEEEEE
Confidence 566656666678877767765431 2432344 5556799999876554 3322 11 1 1222233344333
Q ss_pred eC-CEEEEEECCCCcE
Q 019103 168 LQ-KTGFIYDQNNLNK 182 (346)
Q Consensus 168 ~~-~~v~V~D~~tl~~ 182 (346)
.+ +.....|.+|.++
T Consensus 83 ~dg~~~~fMD~etyeq 98 (136)
T 1bkb_A 83 VSGDVIQLMDMRDYKT 98 (136)
T ss_dssp ECSSEEEEEETTTCCE
T ss_pred ecCCEEEEEeCCCCeE
Confidence 33 3344456666654
No 363
>2rqw_B 24-meric peptide from serine/threonine-protein KI STE20; BEM1P, STE20P, SH3CI, PRR, cytoplasm, cytoskeleton, SH3 DOMA cycle; NMR {Saccharomyces cerevisiae}
Probab=36.18 E-value=19 Score=22.08 Aligned_cols=12 Identities=58% Similarity=0.999 Sum_probs=7.9
Q ss_pred CCCCCCCCCCCC
Q 019103 19 DRPAPSPSPSPS 30 (346)
Q Consensus 19 ~~~~~~~~~~~~ 30 (346)
-||||-|+.+++
T Consensus 11 sRPAPKPP~s~t 22 (26)
T 2rqw_B 11 SRPAPKPPSSAS 22 (26)
T ss_dssp SSCCCCCSSCSC
T ss_pred CCCCCCCCCCCc
Confidence 368988775443
No 364
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=34.59 E-value=2.7e+02 Score=28.81 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=18.4
Q ss_pred CCCeEEEEECCCCcEEEEeccC
Q 019103 126 GRSSVRRVALETGKVEAINQME 147 (346)
Q Consensus 126 g~s~V~~iDl~Tgkv~~~~~l~ 147 (346)
|...|.++|=.||+.+..+++.
T Consensus 227 GpEyL~vfdG~TG~~l~~~~~~ 248 (591)
T 2zux_A 227 GPEYLTVFQGSTGKELVTANFE 248 (591)
T ss_dssp SCCEEEEEETTTCCEEEEEECS
T ss_pred CCcEEEEEeCCCCCEEecccCC
Confidence 3446999999999999999873
No 365
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=32.73 E-value=5.4e+02 Score=28.37 Aligned_cols=176 Identities=10% Similarity=-0.028 Sum_probs=97.7
Q ss_pred CCeEEEEECCCCcEEEEeccCCCeeEEEEEEe------CCEEEEEEe---------eCCEEEEEEC--CCCcEEEEEecC
Q 019103 127 RSSVRRVALETGKVEAINQMEGSYFGEGLTLL------GEKLFQVTW---------LQKTGFIYDQ--NNLNKLEEFTHQ 189 (346)
Q Consensus 127 ~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~------g~~LY~ltw---------~~~~v~V~D~--~tl~~i~ti~~~ 189 (346)
.+.|+.+|+.+.+++..+.+++.-.+..+... ...+-+.|- ..+.+++|+. ..++.+.+-++.
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 36799999999999999988876555545442 133444452 2467888876 356666666664
Q ss_pred CCceeEEeeCCCEEEEECCCCeEEEEeCCCCcEEEEEEeccCCeeeeeceeeEeeCCEEEEEecCCC-eEEEEeCCCCeE
Q 019103 190 MKDGWGLATDGKVLFGSDGSSMLYQIDPQTLKVIRKDIVRYKGREVRNLNELEFIKGEVWANVWQTD-CIARISHEDGVV 268 (346)
Q Consensus 190 ~peGwGLt~Dg~~LyvSdGs~~l~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~~G~LyaNv~~sn-~I~vID~~TG~V 268 (346)
+.-.+|+.=+++|.++=| ++|.+.|-...+.++ ......+. + ....|...+++|+|..-+.. .++..++..++.
T Consensus 886 -g~v~al~~~~g~Lla~ig-~~l~vy~l~~~~~L~-~~~~~~~~-i-~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L 960 (1158)
T 3ei3_A 886 -GAVYSMVEFNGKLLASIN-STVRLYEWTTEKELR-TECNHYNN-I-MALYLKTKGDFILVGDLMRSVLLLAYKPMEGNF 960 (1158)
T ss_dssp -SCEEEEEEETTEEEEEET-TEEEEEEECTTSCEE-EEEEECCC-S-CEEEEEEETTEEEEEESSBCEEEEEEETTTTEE
T ss_pred -CcCEEEeeeCCEEEEEcC-CEEEEEECCCCceEE-EEeecccc-E-EEEEEeccCCEEEEEEhhheEEEEEEEcCCCeE
Confidence 456678876668887765 578888865444333 22211101 0 01134445667776664443 355556666554
Q ss_pred EEEEECCchhhhhhhccCCCCceeeEEEEeCCCCEEEEecCCCCcEEEEEEee
Q 019103 269 LGWVLLPNLRERLVAAGYNGIDVLNGIAWDSNRNRIFVTGKLWPKLYEINLRE 321 (346)
Q Consensus 269 v~~I~l~~l~~~~~~~~~~~~~vlNGIA~d~~~~~LfVTGK~Wp~l~ev~l~~ 321 (346)
+..-+ +.. ...+- .+++-.+ +.+ +.+-...+|+-.+..|
T Consensus 961 ~~~a~--D~~---------~~~vt-a~~~ld~-~t~-l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 961 EEIAR--DFN---------PNWMS-AVEILDD-DNF-LGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEE--CCS---------CBCEE-EEEEEET-TEE-EEEETTSEEEEEEECT
T ss_pred EEEEe--ecc---------cccEE-EEEEEcc-CcE-EEEcCCCcEEEEecCC
Confidence 33221 111 11122 2333212 344 4445567788888776
No 366
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.86 E-value=2.5e+02 Score=27.30 Aligned_cols=72 Identities=21% Similarity=0.266 Sum_probs=47.2
Q ss_pred CCCcceeEEEec-CCEEEEEcCCCCCCeEEEEECCCCcEEEEeccCC-CeeEEEEEEeCCEEEEEEeeCCEEEEEECC
Q 019103 103 PRAFTQGLLYAE-NDTLFESTGLYGRSSVRRVALETGKVEAINQMEG-SYFGEGLTLLGEKLFQVTWLQKTGFIYDQN 178 (346)
Q Consensus 103 ~~~FTqGL~~~~-d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~-~~FgeGit~~g~~LY~ltw~~~~v~V~D~~ 178 (346)
...|.-.+.+++ .|.+|+-|- || .|+.||+.||..+-+..+.. ..|...-.-..+-++..+ +.+.|+-+..+
T Consensus 258 ~~DFPVamqvs~kygviyviTK-~G--~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vn-r~GqVl~v~v~ 331 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITK-YG--YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVN-RKGQVLSVCVE 331 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEET-TS--EEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEE-TTCEEEEEEEC
T ss_pred cCCceEEEEecccCCEEEEEeC-Cc--EEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEc-CCCEEEEEEEC
Confidence 478888999984 457887764 46 99999999999988887754 445421111224455555 55655554443
No 367
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.70 E-value=4.5e+02 Score=25.53 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=51.2
Q ss_pred eEEEecCCE--EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 109 GLLYAENDT--LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 109 GL~~~~d~~--LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
-+++..|.. +-|..| +.++|.++|+.++.-..+-++.... .+-.-...+..+-- ...+-+||.++.+.++++
T Consensus 30 ~lTmESDkyicVrE~~~--~~~~VvIiDl~n~~~~~Rrpi~Ads---AIMnP~~~ViALra-g~~LQiFnletK~klks~ 103 (365)
T 2xzh_A 30 TLTMESDKFICIREKVG--EQAQVVIIDMNDPSNPIRRPISADS---AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH 103 (365)
T ss_dssp TEEEEETTEEEEEEEET--TEEEEEEEETTSTTSCEEEECCCSE---EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred eeeeecCceEEEEecCC--CCCEEEEEECCCCCCccccccccce---eeeCCCccEEEEec-CCeEEEechHHhhhhcce
Confidence 456666664 456666 6779999999998766666676542 11212244555543 788999999999999998
Q ss_pred ec
Q 019103 187 TH 188 (346)
Q Consensus 187 ~~ 188 (346)
..
T Consensus 104 ~~ 105 (365)
T 2xzh_A 104 TM 105 (365)
T ss_dssp EC
T ss_pred ec
Confidence 85
No 368
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=26.21 E-value=3e+02 Score=23.66 Aligned_cols=48 Identities=15% Similarity=0.152 Sum_probs=32.2
Q ss_pred EEEecCCCCcceeEEEecCCEEEE-------EcCCCCCC--eEEEEECCCCcEEEEe
Q 019103 97 NEFPHDPRAFTQGLLYAENDTLFE-------STGLYGRS--SVRRVALETGKVEAIN 144 (346)
Q Consensus 97 ~t~phd~~~FTqGL~~~~d~~Lye-------StGlyg~s--~V~~iDl~Tgkv~~~~ 144 (346)
.|||.....+-.|..+--+|.+|. -+|..|.. ++...|+.||+++...
T Consensus 25 ~t~pi~~~dlrkG~~I~idG~P~~Vve~~~~KpGKhG~A~vr~k~knl~TGk~~E~t 81 (167)
T 3hks_A 25 KTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDI 81 (167)
T ss_dssp CEEEEEGGGCCTTSEEEETTEEEEEEEEEEECSSTTCCCEEEEEEEETTTCCEEEEE
T ss_pred ccEEEEHHHccCCCEEEECCEEEEEEEEEEeCCCCCCceEEEEEEEEcCCCCEEEEE
Confidence 477877777878888776776553 24543555 4445789999876554
No 369
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=25.57 E-value=43 Score=27.38 Aligned_cols=17 Identities=12% Similarity=0.069 Sum_probs=15.3
Q ss_pred EEEEeCCCCeEEEEEEC
Q 019103 258 IARISHEDGVVLGWVLL 274 (346)
Q Consensus 258 I~vID~~TG~Vv~~I~l 274 (346)
|-|||.+||+|+..|+.
T Consensus 71 VkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 71 VKVIEDSTNEVIREIPP 87 (117)
T ss_dssp EEEEETTTTEEEEEECH
T ss_pred EEEEECCCCcEEEeCCh
Confidence 66899999999999965
No 370
>3u5c_E RP5, S7, YS6, 40S ribosomal protein S4-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_D 3u5g_E
Probab=24.14 E-value=84 Score=29.26 Aligned_cols=46 Identities=13% Similarity=0.247 Sum_probs=31.2
Q ss_pred EEEEeccCCeeeeeceeeEeeCCE-E-EEE-ecCCCeEEEEeCCCCeEEEEEEC
Q 019103 224 RKDIVRYKGREVRNLNELEFIKGE-V-WAN-VWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 224 ~~I~V~~~G~pv~~lNELE~~~G~-L-yaN-v~~sn~I~vID~~TG~Vv~~I~l 274 (346)
..+.++..|.|. |-..||+ + |-+ ....++-++||.++++++..|.+
T Consensus 127 ~~k~~~~~G~pq-----l~tHDGrti~~~dp~ik~~Dtv~idl~~~kI~d~ikf 175 (261)
T 3u5c_E 127 KKVQLGKKGVPY-----VVTHDGRTIRYPDPNIKVNDTVKIDLASGKITDFIKF 175 (261)
T ss_dssp EEEEECGGGCEE-----EEETTTEEEESCCSSCCTTCEEEECSSSSCEEEEECC
T ss_pred EEEEEecCCceE-----EEEecceEEecCCCCcccCCEEEEECCCCceeeEEEc
Confidence 355555556663 3456775 2 322 34578889999999999999977
No 371
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=23.90 E-value=5.7e+02 Score=25.80 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=50.7
Q ss_pred eEEEecCCE--EEEEcCCCCCCeEEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEeeCCEEEEEECCCCcEEEEE
Q 019103 109 GLLYAENDT--LFESTGLYGRSSVRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTWLQKTGFIYDQNNLNKLEEF 186 (346)
Q Consensus 109 GL~~~~d~~--LyeStGlyg~s~V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw~~~~v~V~D~~tl~~i~ti 186 (346)
-+++..|.. +-|..| +.++|.++|+.++.-..+-++.... .|-.-...+..+-- ...+-|||.++.+.++++
T Consensus 29 ~~TmESDkyicVrE~~~--~~~~vvIiDl~~~~~~~rrpi~Ads---AIMnP~~~iiALra-g~~lQiFnle~K~klks~ 102 (494)
T 1bpo_A 29 TLTMESDKFICIREKVG--EQAQVVIIDMNDPSNPIRRPISADS---AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH 102 (494)
T ss_dssp TEEEEETTEEEEEECCT--TCCEEEEEETTSTTSCEEEECCCSE---EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred eeeeecCceEEEEecCC--CCCeEEEEECCCCCcceecccccce---eeeCCCCcEEEEec-CCeEEEEchHHhhhhcce
Confidence 356666664 345566 7789999999998766666666542 11112234554443 889999999999999998
Q ss_pred ec
Q 019103 187 TH 188 (346)
Q Consensus 187 ~~ 188 (346)
..
T Consensus 103 ~~ 104 (494)
T 1bpo_A 103 TM 104 (494)
T ss_dssp EC
T ss_pred ec
Confidence 85
No 372
>2k89_A PLA2P, PLAP, phospholipase A-2-activating protein; ubiquitin binding, WD repeat, protein binding; NMR {Homo sapiens} PDB: 2k8a_A 2k8b_B 2k8c_B
Probab=23.85 E-value=31 Score=26.63 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=31.3
Q ss_pred CCEEEEecCCCCcEEEEEEe----eccccccCCCchhHHHhhhhh
Q 019103 301 RNRIFVTGKLWPKLYEINLR----EMKRERKDGFNVDTIIEQLCL 341 (346)
Q Consensus 301 ~~~LfVTGK~Wp~l~ev~l~----~~~~~~~~~~~~~~~~~~~~~ 341 (346)
++. +.-||.|+.+|.|++. +++=+.--|-|.+.+-++-|.
T Consensus 7 ~k~-~~~GkeYDyVFdVdi~dG~~~lkLpyN~~dnP~~aAqkFi~ 50 (80)
T 2k89_A 7 GKV-LYEGKEFDYVFSIDVNEGGPSYKLPYNTSDDPWLTAYNFLQ 50 (80)
T ss_dssp SCE-EETTEEESEEEEECCSSSCSCEEEEECTTSCHHHHHHHHHH
T ss_pred Cce-eecCccccEEEEEEcCCCCcccccCccCCCCHHHHHHHHHH
Confidence 444 5599999999999986 455577777788888888884
No 373
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=23.06 E-value=3.1e+02 Score=22.46 Aligned_cols=84 Identities=13% Similarity=0.042 Sum_probs=45.3
Q ss_pred EEecCCCCcceeEEEecCCEEEEE-------cCCCCCCe--EEEEECCCCcEEEEeccCCCeeEEEEEEeCCEEEEEEe-
Q 019103 98 EFPHDPRAFTQGLLYAENDTLFES-------TGLYGRSS--VRRVALETGKVEAINQMEGSYFGEGLTLLGEKLFQVTW- 167 (346)
Q Consensus 98 t~phd~~~FTqGL~~~~d~~LyeS-------tGlyg~s~--V~~iDl~Tgkv~~~~~l~~~~FgeGit~~g~~LY~ltw- 167 (346)
|||.....|-.|..+.-+|.+|.- .|..|... +...|+.||+......-....+- - +...++=||..+
T Consensus 8 t~~i~~~~lr~G~~I~~~g~p~~V~e~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve-~-~~ve~~~~qyly~ 85 (136)
T 2eif_A 8 TKQVNVGSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVE-V-PIIDRRKGQVLAI 85 (136)
T ss_dssp EEEEEGGGCCTTSEEEETTEEEEEEEEEECCCCSSSCCEEEEEEEESSSCCEEEEEEETTSEEE-E-ECEEEEEEEEEEE
T ss_pred eEEEEHHHCcCCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEEcCCCCeEEEEecCCCEec-c-ccEeeeEEEEEEe
Confidence 566656667678877767765432 24335444 45578999987654422222222 1 222233333322
Q ss_pred eCCEEEEEECCCCcEE
Q 019103 168 LQKTGFIYDQNNLNKL 183 (346)
Q Consensus 168 ~~~~v~V~D~~tl~~i 183 (346)
..+.....|.+|++++
T Consensus 86 dg~~~~fMD~etyeq~ 101 (136)
T 2eif_A 86 MGDMVQIMDLQTYETL 101 (136)
T ss_dssp ETTEEEEEETTTCCEE
T ss_pred cCCEEEEEeCCCceEE
Confidence 3455566788877754
No 374
>3iz6_D 40S ribosomal protein S4 (S4E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=22.44 E-value=85 Score=29.31 Aligned_cols=46 Identities=15% Similarity=0.273 Sum_probs=30.4
Q ss_pred EEEEeccCCeeeeeceeeEeeCCE--EEEE-ecCCCeEEEEeCCCCeEEEEEEC
Q 019103 224 RKDIVRYKGREVRNLNELEFIKGE--VWAN-VWQTDCIARISHEDGVVLGWVLL 274 (346)
Q Consensus 224 ~~I~V~~~G~pv~~lNELE~~~G~--LyaN-v~~sn~I~vID~~TG~Vv~~I~l 274 (346)
..+.++..|.|. |-..||+ .|-. ....++-++||.++++++..|.+
T Consensus 127 ~~k~~~~~G~pq-----l~tHDGrti~~~dp~ik~~DTv~idl~~~kI~d~ikf 175 (265)
T 3iz6_D 127 RSVQFGQKGIPY-----LNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKF 175 (265)
T ss_dssp EEEECCSSSCCE-----EEETTSCCCBSCSSCCCTTCEEEECSSSCCEEEEECC
T ss_pred EEEEEccCCceE-----EEeecceEEecCCCCcccCCEEEEECCCCceeeEEEc
Confidence 345555566663 3345554 2322 34577888999999999999976
No 375
>2kxc_B ESPF-like protein; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Escherichia coli}
Probab=22.43 E-value=52 Score=22.96 Aligned_cols=19 Identities=11% Similarity=0.160 Sum_probs=12.6
Q ss_pred cccCCCCCCCCCCCCCCCC
Q 019103 16 SQSDRPAPSPSPSPSSSSS 34 (346)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~ 34 (346)
--..||++.|.+++.++-+
T Consensus 27 ~~p~rPa~P~Pt~~~~~~~ 45 (48)
T 2kxc_B 27 HIPPAPNWPAPTPPVQNEQ 45 (48)
T ss_pred cCCCCCCCCCCCCcccccc
Confidence 3456788777777776644
No 376
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=22.18 E-value=60 Score=32.39 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=23.6
Q ss_pred eeCCEEEEEecCCCeEEEEeCCCCeEEEEEECCc
Q 019103 243 FIKGEVWANVWQTDCIARISHEDGVVLGWVLLPN 276 (346)
Q Consensus 243 ~~~G~LyaNv~~sn~I~vID~~TG~Vv~~I~l~~ 276 (346)
|+||+ |+.--...++-++||.||++++++...+
T Consensus 10 ~I~G~-~~~~~~~~~~~v~nP~tg~~i~~v~~a~ 42 (490)
T 2wme_A 10 YIGGR-YVEASSGATFETINPANGEVLAKVQRAS 42 (490)
T ss_dssp ECSSS-EECCSSSCEEEEECTTTCCEEEEEECCC
T ss_pred EECCe-eeCCCCCCEEEeeCCCCCCEEEEEeCCC
Confidence 45555 3322235689999999999999997754
No 377
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=21.82 E-value=6.6e+02 Score=25.74 Aligned_cols=102 Identities=15% Similarity=0.088 Sum_probs=61.1
Q ss_pred EEEEcCCCCCCeEEEEECCC---CcEEEEec------cCCCeeEE-EEEEe-CCE--EEEEEe-----eCCEEEEEECCC
Q 019103 118 LFESTGLYGRSSVRRVALET---GKVEAINQ------MEGSYFGE-GLTLL-GEK--LFQVTW-----LQKTGFIYDQNN 179 (346)
Q Consensus 118 LyeStGlyg~s~V~~iDl~T---gkv~~~~~------l~~~~Fge-Git~~-g~~--LY~ltw-----~~~~v~V~D~~t 179 (346)
|+-+.| .|-..+..+|..+ .+++=++. |+.. ++. -|+.. +++ +++.+- ....+||+|++|
T Consensus 155 Lvggmg-~GG~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t-~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d~~t 232 (570)
T 3hx6_A 155 LIGSLR-AGGKGLFALDVTDPANIKLLWEIGVDQEPDLGYS-FPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIIDMET 232 (570)
T ss_dssp EEEECT-TSCSEEEEEECSSGGGCEEEEEEETTTCTTCCBC-CSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEETTT
T ss_pred EEEecC-CCCcEEEEEECCCCCCCceeEEECCCCccccCcc-ccCCEEEEecCCCEEEEEccccCCCCCccEEEEEECCC
Confidence 444445 4667899999765 56665554 1100 000 01111 222 222222 245899999999
Q ss_pred CcEEEEEecC----CCceeE----EeeCC----CEEEEECCCCeEEEEeCCCCc
Q 019103 180 LNKLEEFTHQ----MKDGWG----LATDG----KVLFGSDGSSMLYQIDPQTLK 221 (346)
Q Consensus 180 l~~i~ti~~~----~peGwG----Lt~Dg----~~LyvSdGs~~l~vIDp~T~k 221 (346)
++++++|+.+ .+.|.+ +..|+ +++|+.|-...|+-+|..+..
T Consensus 233 G~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 233 GAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp CCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred CceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 9999999874 124433 22333 589999988999999976543
No 378
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=21.36 E-value=58 Score=26.59 Aligned_cols=35 Identities=11% Similarity=-0.016 Sum_probs=25.0
Q ss_pred CcceeEEEecCCEEEEEcCCCCCCeEEEEECCCCcEEEEecc
Q 019103 105 AFTQGLLYAENDTLFESTGLYGRSSVRRVALETGKVEAINQM 146 (346)
Q Consensus 105 ~FTqGL~~~~d~~LyeStGlyg~s~V~~iDl~Tgkv~~~~~l 146 (346)
++-.+|.|.-| +.+ |.--|.++|.+||+|++++|-
T Consensus 53 ~~n~~L~F~vd----ee~---~~~vVkVvD~~TgEVIRqIPp 87 (117)
T 2hc5_A 53 PSQVHLKFELH----DKL---NEYYVKVIEDSTNEVIREIPP 87 (117)
T ss_dssp TSSCCEEEEEE----EET---TEEEEEEEETTTTEEEEEECH
T ss_pred hcCCceEEEEe----cCC---CcEEEEEEECCCCcEEEeCCh
Confidence 34457777622 343 346788999999999999864
No 379
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=21.30 E-value=2.5e+02 Score=27.82 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=36.8
Q ss_pred EEEeCCCCcEEEEEEeccCCeeeeeceeeEee---CCEEEEEecC-------CCeEEEEeCCCCeEEEEE
Q 019103 213 YQIDPQTLKVIRKDIVRYKGREVRNLNELEFI---KGEVWANVWQ-------TDCIARISHEDGVVLGWV 272 (346)
Q Consensus 213 ~vIDp~T~kvi~~I~V~~~G~pv~~lNELE~~---~G~LyaNv~~-------sn~I~vID~~TG~Vv~~I 272 (346)
+.||+++.++..+. +.+.+.++..+|+- +. ..++|+.... -+.|+++|.+||++..|.
T Consensus 350 ~~i~l~~g~v~~~~-l~~~~~EfP~In~~-~~G~~~Ry~Y~~~~~~~~~~~~~~~l~K~D~~tg~~~~~~ 417 (490)
T 2biw_A 350 FTIDPAAATVEKQL-MVSRCCEFPVVHPQ-QVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESGTETLRS 417 (490)
T ss_dssp EEEETTTTEEEEEE-EECSCEEEEECCGG-GTTSCCSEEEEEECSSSSSCCCCCEEEEEETTTTEEEEEE
T ss_pred EEEECCCCceEEEe-ccCCcccccccChh-hCCceeeeEEEEeecCCCCCCCCCeEEEEECCCCCEEEEE
Confidence 45788887775443 22333455555542 22 2479987652 367999999999987664
Done!