Your job contains 1 sequence.
>019104
MVSVNPNPAQGFFFFDPMNMGHPGPNSLPPTGSYNAATTTNDSTTASASTKSTGAINTMS
FAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHA
QKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKTVHGVSQFGGQVQSSAALLEPGYIY
RPDSSSVLGNPVPVAALSSWSYDSVPPVNVSQVTKDDVGLPGSSNAQNFCYSSSNDSTLR
TWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPINFETVLLLM
RNLAINLTSPEFEDHKRLLSLYDVESERNKFGSLHAGNSESAIPSA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019104
(346 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 711 5.9e-76 2
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 728 5.3e-72 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 408 1.4e-70 2
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 583 1.2e-56 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 549 4.9e-53 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 303 3.6e-40 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 246 3.2e-23 2
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 242 4.5e-21 2
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 232 1.9e-19 1
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 238 4.3e-19 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 230 4.5e-19 1
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 230 1.1e-18 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 163 6.1e-08 2
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 142 1.3e-06 1
UNIPROTKB|J9P785 - symbol:MYSM1 "Uncharacterized protein"... 133 4.2e-06 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 123 3.3e-05 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 122 5.8e-05 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 121 6.0e-05 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 121 6.6e-05 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 120 6.7e-05 1
UNIPROTKB|F1NJR7 - symbol:MYSM1 "Histone H2A deubiquitina... 127 7.1e-05 1
UNIPROTKB|F1NCM9 - symbol:MYSM1 "Histone H2A deubiquitina... 127 7.2e-05 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 116 7.4e-05 1
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 125 8.9e-05 2
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 119 0.00010 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 116 0.00012 2
ZFIN|ZDB-GENE-041014-28 - symbol:mysm1 "Myb-like, SWIRM a... 124 0.00015 1
UNIPROTKB|Q5F3F2 - symbol:MYSM1 "Histone H2A deubiquitina... 124 0.00015 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 116 0.00019 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 114 0.00032 1
UNIPROTKB|A0JMR6 - symbol:mysm1 "Histone H2A deubiquitina... 121 0.00032 1
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 114 0.00044 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 111 0.00050 2
UNIPROTKB|F1S7A6 - symbol:MYSM1 "Uncharacterized protein"... 117 0.00093 1
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 711 (255.3 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 150/275 (54%), Positives = 188/275 (68%)
Query: 54 GAINTMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTV 113
G +T+SF+EDP+ KIRKPYTI KSRE+WT+QEHDKFLEAL LFDRDWKKIEAF+GSKTV
Sbjct: 34 GRTSTVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTV 93
Query: 114 IQIRSHAQKYFLKVQKNGTSEHVXXXXXXXXXXXXXXQKAPKTVHGVSQFGGQVQSSAAL 173
+QIRSHAQKYFLKVQK+G +EH+ KAPK V S S+ L
Sbjct: 94 VQIRSHAQKYFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSL---PSSSTLPL 150
Query: 174 LEPGYIYRPDSSSVLGNPVPVAALSS-WSYDSVP-PVNVSQVTKDDVGLPGSSNAQNFCY 231
LEPGY+Y DS S++GN A+ SS W+++S P V +V + V N C
Sbjct: 151 LEPGYLYSSDSKSLMGNQAVCASTSSSWNHESTNLPKPVIEVEEPGVSATAPL-PNNRC- 208
Query: 232 SSSNDSTLRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPI 291
+ T R V + + KP RVMP+FA+VYSF+GSVFDPN++GH+QRLKQMDPI
Sbjct: 209 --RQEDTERVRAVTKPNNEESCEKPHRVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPI 266
Query: 292 NFETVLLLMRNLAINLTSPEFEDHKRLLSLYDVES 326
N ETVLLLM+NL++NLTSPEF + +RL+S Y ++
Sbjct: 267 NMETVLLLMQNLSVNLTSPEFAEQRRLISSYSAKA 301
Score = 73 (30.8 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
Identities = 19/35 (54%), Positives = 21/35 (60%)
Query: 1 MVSVNPNPAQGFFFFDPMNMGHP---GPNSLPPTG 32
MVSVNP P +GF FD NM P G S+P TG
Sbjct: 1 MVSVNPRP-KGFPVFDSSNMSLPSSDGFGSIPATG 34
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 167/329 (50%), Positives = 208/329 (63%)
Query: 1 MVSVNPNPAQGFFFFDPMNMGHPGPNSLPPTGSYNXXXXXXXXXXXXXXXXXXGAINTM- 59
MVS N + G+F DP M PG L P S+ + M
Sbjct: 1 MVSRN---SDGYFL-DPTGMTVPG---LGP--SFTAAVSSSSSPTTSSTAVAVADVTAMV 51
Query: 60 -SFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS 118
S ED SKKIRKPYTITKSRESWTE EHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS
Sbjct: 52 SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRS 111
Query: 119 HAQKYFLKVQKNGTSEHVXXXXXXXXXXXXXXQKAPKTVHGVSQFGGQVQSSAALLEPGY 178
HAQKYFLKVQK+GT EH+ QKA K V Q G +S++ +P +
Sbjct: 112 HAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQ--LQVPGSFKSTSEPNDPSF 169
Query: 179 IYRPDSSSVLGNPVPVAALSSWSYDSVPPVNVSQVTKDDVGLPGSSNAQNFCYSSSNDST 238
++RP+SSS+L AA + W+ ++ ++ + + K G A N C SSS+++T
Sbjct: 170 MFRPESSSMLMTSPTTAAAAPWT-NNAQTISFTPLPKAGAG------ANNNC-SSSSENT 221
Query: 239 LRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPINFETVLL 298
R + D G+ G RV+PDFAQVY F+GSVFDP ++ H+Q+LK+MDPI+ ETVLL
Sbjct: 222 PRPRSNRDARDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKMDPIDVETVLL 281
Query: 299 LMRNLAINLTSPEFEDHKRLLSLYDVESE 327
LMRNL+INL+SP+FEDH+RLLS YD+ SE
Sbjct: 282 LMRNLSINLSSPDFEDHRRLLSSYDIGSE 310
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 408 (148.7 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 96/185 (51%), Positives = 111/185 (60%)
Query: 4 VNPNPAQGFFFFDPMNMGHPGPNSLPPTGSYNXXXXXXXXXXXXXXXXXXGAINTMSFAE 63
V NP+Q PM M PG N+LP T + + TMSF E
Sbjct: 2 VTVNPSQAHCL--PMKMSLPGFNTLPHTAT--------------TIPVSIRSNRTMSFFE 45
Query: 64 DPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKY 123
DP+KK+RKPYTITKSRE+WTEQEHDKFLEAL LFDRDWKKI+AF+GSKTVIQIRSHAQKY
Sbjct: 46 DPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKY 105
Query: 124 FLKVQKNGTSEHVXXXXXXXXXXXXXXQKAPKTVHGVSQFGGQVQSSAALLEPGYIYRPD 183
FLKVQKNGT EH+ QKAPK + SS AL + Y+Y +
Sbjct: 106 FLKVQKNGTKEHLPPPRPKRKANHPYPQKAPKFT---------LSSSNALFQHDYLYNTN 156
Query: 184 SSSVL 188
S V+
Sbjct: 157 SHPVI 161
Score = 325 (119.5 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 72/158 (45%), Positives = 104/158 (65%)
Query: 167 VQSSAALLEPGYIYRPDSSSVLGNPVPVAALSSWSYD-SVPPVNVSQVTKDDVGLPGSSN 225
+ SS AL + Y+Y +S V+ + D S+P S V K++ G+
Sbjct: 140 LSSSNALFQHDYLYNTNSHPVISTTRKHGLVHC---DVSIP----SSVIKEEFGV----- 187
Query: 226 AQNFCYSSSNDSTLRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRL 285
++N C +SS+ RT V ET D+ GKP RV P+FA+VY+F+GSVFDP +TGH++RL
Sbjct: 188 SENCCSTSSSRDKQRTRIVTETNDQESCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRL 247
Query: 286 KQMDPINFETVLLLMRNLAINLTSPEFEDHKRLLSLYD 323
K+MDPIN ETVLLLM+NL++NLTSPEF++ ++L+S Y+
Sbjct: 248 KEMDPINLETVLLLMKNLSVNLTSPEFDEQRKLISSYN 285
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 137/287 (47%), Positives = 173/287 (60%)
Query: 57 NTMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQI 116
+T + AE SKK+RKPYTITKSRESWTE+EHDKFLEALQLFDRDWKKIE F+GSKTVIQI
Sbjct: 21 STDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQI 80
Query: 117 RSHAQKYFLKVQKNGTSEHVXXXXXXXXXXXXXXQKAPKTVHGVSQFGGQVQSSAALLEP 176
RSHAQKYFLKVQKNGT HV QKA K Q ++ P
Sbjct: 81 RSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMPLQVSTSFTTTRNGDMP 140
Query: 177 GYIYRPDSSSVLGNPV-PVAALSSWSYDSVPPVNVSQVTKDDVGLPGSSNAQNFCYSSSN 235
GY D+S +L + P L++ + + D+G G N + S
Sbjct: 141 GYASWDDASMLLNRVISPQHELATL-----------RGAEADIGSKGLLNVSSPSTSGMG 189
Query: 236 DSTLRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPINFET 295
S+ RT E + + +PDFA+VY+F+GSVFDP + GH+++LK+MDPINFET
Sbjct: 190 SSS-RTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHVEKLKEMDPINFET 248
Query: 296 VLLLMRNLAINLTSPEFEDHKRLLSLYD-VESERNKFGSLHAGNSES 341
VLLLMRNL +NL++P+ E +++L YD V +E SL NS S
Sbjct: 249 VLLLMRNLTVNLSNPDLESTRKVLLSYDNVTTELPSVVSL-VKNSTS 294
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 129/262 (49%), Positives = 162/262 (61%)
Query: 56 INTMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 115
I T E P KK+RK YTITKSRESWTE EHDKFLEALQLFDRDWKKIE F+GSKTVIQ
Sbjct: 25 IATTEAGEAPEKKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ 84
Query: 116 IRSHAQKYFLKVQKNGTSEHVXXXXXXXXXXXXXXQKAPK----TVHGVSQFGGQVQSSA 171
IRSHAQKYFLKVQKNGT HV QKA K ++H F Q+ +
Sbjct: 85 IRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNL- 143
Query: 172 ALLEPGYIYRPDSSSVLGNPVPVAALSSWSYDSVPPVNVSQVTKDDVGLPGSSNAQNFCY 231
PGY D +S L N + V+ + D + + ++V DVG ++
Sbjct: 144 ----PGYTPWDDDTSALLN-IAVSGVIP-PEDELDTLCGAEV---DVG-SNDMISETSPS 193
Query: 232 SSSNDSTLRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPI 291
+S S+ RT + + +PDFA+VY+F+GSVFDP+S G +++LK+MDPI
Sbjct: 194 ASGIGSSSRTLSDSKGLRLAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPI 253
Query: 292 NFETVLLLMRNLAINLTSPEFE 313
NFETVLLLMRNL +NL++P+FE
Sbjct: 254 NFETVLLLMRNLTVNLSNPDFE 275
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 303 (111.7 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 55/71 (77%), Positives = 63/71 (88%)
Query: 66 SKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFL 125
S K RKPYTI+K RE+WT++EH KFLEAL LFDRDWKKIE+F+GSKTVIQIRSHAQKYF+
Sbjct: 28 SLKSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFI 87
Query: 126 KVQKNGTSEHV 136
KVQKN T E +
Sbjct: 88 KVQKNNTGERI 98
Score = 141 (54.7 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 40/155 (25%), Positives = 78/155 (50%)
Query: 182 PDSSSVLGNP-VPVAALSSW-SYDSVPP-VNVSQVTKDDVG--LPGSSNAQNFCYSSSND 236
PDS S GN + ++ ++W +Y + P ++ SQ+ D+ L AQ + +
Sbjct: 125 PDSLS--GNHFISSSSFATWMTYRGLMPNISESQINPSDLQKQLEQLQQAQQYIQQAVTT 182
Query: 237 STLRTWPVGETIDRGDHGKPRRVMPDFAQVYSFLGSVFDPNSTGHIQRLKQMDPINFETV 296
+ G + + + P+F ++Y+FL ++F+ N T + L + I+ ET+
Sbjct: 183 AQSSQRNGGLPPNPSSNNGGTTLTPNFPKIYAFLSNLFESNGTSFTEALSDLSMIDRETM 242
Query: 297 LLLMRNLAINLTSPEFED-HKRLLSLYDVESERNK 330
+LM NLAINL + ++ D H+ L Y ++ + ++
Sbjct: 243 QILMHNLAINLANQQYRDNHQTLSEQYRMKRDEDE 277
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 246 (91.7 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 57 NTMSFA-EDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 115
N SF D + K+RKPYTITK RE WT++EH KF+EAL+L+ R W++IE +GSKT +Q
Sbjct: 32 NDQSFGGNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQ 91
Query: 116 IRSHAQKYFLKVQKNGT 132
IRSHAQK+F KV + T
Sbjct: 92 IRSHAQKFFSKVAREAT 108
Score = 40 (19.1 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 326 SERNKFGSLHAGNSES 341
SER+ F L NSES
Sbjct: 346 SERSAFSELRRTNSES 361
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 242 (90.2 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 45/81 (55%), Positives = 60/81 (74%)
Query: 56 INTMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 115
+ T S ED K RKPYTITK RE WTE+EH++F+EAL+L+ R W+KIE + +KT +Q
Sbjct: 1 METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60
Query: 116 IRSHAQKYFLKVQKNGTSEHV 136
IRSHAQK+F KV+K ++ V
Sbjct: 61 IRSHAQKFFSKVEKEAEAKGV 81
Score = 37 (18.1 bits), Expect = 4.5e-21, Sum P(2) = 4.5e-21
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 220 LPGSSNAQNFCYSSSNDSTLR 240
L +S+ C +SN ST R
Sbjct: 166 LSAASSMNKSCIETSNASTFR 186
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 68 KIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKV 127
K RKPYTITK RE WTE EH+KF+EAL+L+ R W++IE +G+KT +QIRSHAQK+F KV
Sbjct: 25 KTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKV 84
Query: 128 QKN-GTS 133
++ G S
Sbjct: 85 ARDFGVS 91
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 238 (88.8 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 43/74 (58%), Positives = 58/74 (78%)
Query: 56 INTMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ 115
++T + E+ K RKPYTITK RE WTE EH++FLEAL+L+ R W++IE IG+KT +Q
Sbjct: 1 MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60
Query: 116 IRSHAQKYFLKVQK 129
IRSHAQK+F K++K
Sbjct: 61 IRSHAQKFFTKLEK 74
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 230 (86.0 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 68 KIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKV 127
K+RKPYT+TK RE W+E+EHD+FLEA++L+ R W++I+ IG+KT +QIRSHAQK+F K+
Sbjct: 54 KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 113
Query: 128 QKNGTS 133
+ S
Sbjct: 114 AQEADS 119
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 68 KIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKV 127
K+RKPYT+TK RE W+E+EHD+FLEA++L+ R W++I+ IG+KT +QIRSHAQK+F K+
Sbjct: 65 KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 124
Query: 128 QKNGTS 133
+ S
Sbjct: 125 AQEADS 130
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 163 (62.4 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 28/54 (51%), Positives = 44/54 (81%)
Query: 78 SRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNG 131
+R SWT++E F+EA +L+D+D KKI+ + +KT++Q+RSHAQK+ LK++KNG
Sbjct: 149 TRSSWTKEEERLFVEAYKLYDKDNKKIQEHVKTKTILQVRSHAQKFALKLEKNG 202
Score = 37 (18.1 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 16/57 (28%), Positives = 24/57 (42%)
Query: 201 SYDSVPPVNVSQVTKDDVGLPGSSNAQNFC--YSSSNDSTLRTWPVGETIDRGDHGK 255
SY N S +K D+ SS + + SSS+ ST+ + G G G+
Sbjct: 340 SYSDNGNGNKSTSSKSDLSNTRSSGSSSSSGSSSSSSSSTISSGGSGGRSSGGSSGR 396
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 76 TKSRESWTEQEHDKFLEALQLFDRD-WKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGT 132
T ++ WT++EH +FL +Q+ + WK+I F+G++T QI+SHAQKY+L+ QK T
Sbjct: 373 TSLKQGWTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYLR-QKQET 429
>UNIPROTKB|J9P785 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00530000063766 EMBL:AAEX03003792
Ensembl:ENSCAFT00000045716 Uniprot:J9P785
Length = 358
Score = 133 (51.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 63 EDPSKKIRKPYTITKSRE---SWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSH 119
ED K +++ ++ TKS WT +E + F + L F R W KI IGS+TV+Q++S+
Sbjct: 57 EDDKKYMKRAHSPTKSASYSVKWTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVKSY 116
Query: 120 AQKYFL-KVQKNG 131
A++YF KV+ +G
Sbjct: 117 ARQYFKNKVKLDG 129
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKVQKNGTSE 134
WTE+EH +FL L + + DW+ I F+GSKT Q+ SHAQKY+ + Q +G +
Sbjct: 133 WTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR-QLSGAKD 186
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 66 SKKIRKPYTITKSRESWTEQEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKY 123
SKK + + K + WTE+EH FL L + DW+ I ++F+ ++T Q+ SHAQKY
Sbjct: 95 SKKGKTAHEKKKGKP-WTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKY 153
Query: 124 FLKVQKN 130
F+++ N
Sbjct: 154 FIRLNVN 160
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 121 (47.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLK 126
WTE EH +FL LQ + DWK I F+ S+T Q+ SHAQKYFL+
Sbjct: 104 WTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLR 150
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 121 (47.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKVQKNG 131
WTE+EH +FL L+ + + DW+ I F+ ++T Q+ SHAQKYF++ Q NG
Sbjct: 143 WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIR-QVNG 193
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 120 (47.3 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKI-EAFIGSKTVIQIRSHAQKYFLKVQKNG 131
WTE EH +FL L+ + + DW+ I ++F+ ++T Q+ SHAQKYFL+ +G
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDG 199
>UNIPROTKB|F1NJR7 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00530000063766 EMBL:AADN02012509
IPI:IPI00573219 Ensembl:ENSGALT00000017668 ArrayExpress:F1NJR7
Uniprot:F1NJR7
Length = 829
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 69 IRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQ 128
+R P WT +E + F + L F R W KI IGS+TV+Q++S+A++YF
Sbjct: 107 VRSPTKPGSYSLKWTSEEKELFEQGLVKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKA 166
Query: 129 KNGTSE 134
KN SE
Sbjct: 167 KNDGSE 172
>UNIPROTKB|F1NCM9 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003713 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 IPI:IPI00820738 OMA:ENGLIPW
EMBL:AADN02012509 Ensembl:ENSGALT00000038040 ArrayExpress:F1NCM9
Uniprot:F1NCM9
Length = 832
Score = 127 (49.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 69 IRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQ 128
+R P WT +E + F + L F R W KI IGS+TV+Q++S+A++YF
Sbjct: 109 VRSPTKPGSYSLKWTSEEKELFEQGLVKFGRRWTKIAKLIGSRTVLQVKSYARQYFKNKA 168
Query: 129 KNGTSE 134
KN SE
Sbjct: 169 KNDGSE 174
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 116 (45.9 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEAF-IGSKTVIQIRSHAQKYFLKVQKNGTS 133
W+E+E FLE L F + DWK I + + S+T Q+ SHAQKYF + ++ T+
Sbjct: 93 WSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTN 146
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 125 (49.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 77 KSRESWTEQEHDKFLEALQLFD-RDWKKIEAFIGSKTVIQIRSHAQKYFLKVQK 129
K WT +EH +F+EAL + +D K I ++ ++ Q+R+HAQKYFL++ +
Sbjct: 170 KQSRYWTPEEHSRFIEALSKYGHKDVKSISQYVSTRNPTQVRTHAQKYFLRIDR 223
Score = 46 (21.3 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 183 DSSSVLGNPVPVAALSSWSYDSVPPVN-VSQVTKDDVGLPGSSN 225
+SSS GN P+ + S S PP ++ T + PG N
Sbjct: 812 NSSSYSGNQSPLGLVPSPSLSLHPPSPLITSPTSHSIRWPGPLN 855
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 179 IYRPDSSSVLGNPVP-VAALS-----SWSYDSV---PPVNVSQ----VTKDDVGLPGSSN 225
IY+ + +S GN P +++++ S +Y++ PPVNVS+ VT G P S
Sbjct: 733 IYQQNLNSNSGNSSPNISSINGDFVRSPNYNNKKRPPPVNVSRPEFPVTPLS-GSPSHSP 791
Query: 226 AQNFCYSSSN 235
AQ+ Y+ +N
Sbjct: 792 AQSPHYNLNN 801
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 70 RKPYTITKSRESWTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKV 127
R P K WTE+EH FL L+ + + DW+ I F+ ++T Q+ SHAQKYF++
Sbjct: 131 RSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 190
Query: 128 QKNG 131
G
Sbjct: 191 LSGG 194
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 116 (45.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKV 127
WTE+EH FL L F + DW+ I F+ S+T Q+ SHAQKYF+++
Sbjct: 136 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRL 183
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 151 QKAPKTVHGVSQFGGQVQSSAALLEPGYIYRPDSSSVLGNPV 192
Q P T+ G+ +GG + P ++ S +G PV
Sbjct: 235 QHHPPTMAGLGMYGGAPVGQPIIAPPDHM-----GSAVGTPV 271
>ZFIN|ZDB-GENE-041014-28 [details] [associations]
symbol:mysm1 "Myb-like, SWIRM and MPN domains 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0016578 "histone
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 ZFIN:ZDB-GENE-041014-28
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 HSSP:Q5VVJ2 KO:K11865 eggNOG:COG5259
CTD:114803 HOGENOM:HOG000113713 OrthoDB:EOG4ZGPBQ EMBL:BX942841
EMBL:BC134239 IPI:IPI00494402 RefSeq:NP_001157501.1
UniGene:Dr.86682 Ensembl:ENSDART00000044655 GeneID:561225
KEGG:dre:561225 InParanoid:A3KPA5 NextBio:20883824 Bgee:Q5RGA4
Uniprot:Q5RGA4
Length = 822
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 68 KIRKPYTITKSRES-WTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYF 124
K++KP + + ++ W E+E + F + L F R W KI IG++TV+Q++S+A++YF
Sbjct: 87 KVKKPLVKSSAAQTRWAEEEKELFEKGLAQFGRRWTKIAKLIGTRTVLQVKSYAKQYF 144
>UNIPROTKB|Q5F3F2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 EMBL:AJ851698 IPI:IPI00820738 RefSeq:NP_001012945.1
UniGene:Gga.6922 ProteinModelPortal:Q5F3F2 SMR:Q5F3F2
MEROPS:M67.005 GeneID:424671 KEGG:gga:424671 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 InParanoid:Q5F3F2
OrthoDB:EOG4ZGPBQ NextBio:20826977 Uniprot:Q5F3F2
Length = 832
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 69 IRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQ 128
+R P WT +E + F + L + R W KI IGS+TV+Q++S+A++YF
Sbjct: 109 VRSPTKPGSYSLKWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKNKA 168
Query: 129 KNGTSE 134
KN SE
Sbjct: 169 KNDGSE 174
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLK 126
WTE+EH FL LQ + DWK I F+ ++T Q+ SHAQKYFL+
Sbjct: 98 WTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLR 144
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 114 (45.2 bits), Expect = 0.00032, P = 0.00032
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKVQKNGTSE 134
WTE+EH +FL L + + DW+ I F+ SKT Q+ SHAQKY+ + Q +G +
Sbjct: 129 WTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQR-QLSGAKD 182
>UNIPROTKB|A0JMR6 [details] [associations]
symbol:mysm1 "Histone H2A deubiquitinase MYSM1"
species:8355 "Xenopus laevis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 KO:K11865 MEROPS:M67.005 CTD:114803
EMBL:BC125979 RefSeq:NP_001090503.1 UniGene:Xl.3062
ProteinModelPortal:A0JMR6 SMR:A0JMR6 GeneID:779416 KEGG:xla:779416
Xenbase:XB-GENE-1032962 Uniprot:A0JMR6
Length = 818
Score = 121 (47.7 bits), Expect = 0.00032, P = 0.00032
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 67 KKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYF 124
K++R P + S WT++E + F + L F R W I IGS++V+Q++++A+ YF
Sbjct: 97 KRVRSPAKASSSPVKWTKEEKNLFEQGLATFGRRWTSIARLIGSRSVLQVKNYARHYF 154
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKVQKNG 131
WTE+EH FL L+ + + DW+ I F+ ++T Q+ SHAQKYF++ G
Sbjct: 134 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGG 185
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 111 (44.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 82 WTEQEHDKFLEALQLFDR-DWKKIEA-FIGSKTVIQIRSHAQKYFLKVQKN 130
W+ +EH FL+ L + + DWK I + S++ +Q+ SHAQKYFL+ QKN
Sbjct: 97 WSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLR-QKN 146
Score = 39 (18.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 203 DSVPPVNVSQVTKDDVGLPGSS 224
D +PP ++D+V + GS+
Sbjct: 217 DQIPPGEYHPYSRDNVTVTGSN 238
>UNIPROTKB|F1S7A6 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766
OMA:ENGLIPW EMBL:CU929656 EMBL:CU695066 Ensembl:ENSSSCT00000004239
Uniprot:F1S7A6
Length = 835
Score = 117 (46.2 bits), Expect = 0.00093, P = 0.00093
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 58 TMSFAEDPSKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIR 117
T S + + P WT +E + F + L F R W KI IGS+TV+Q++
Sbjct: 95 TKSLQKTAKIMVHSPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVK 154
Query: 118 SHAQKYFL-KVQKNG 131
S+A++YF KV+ +G
Sbjct: 155 SYARQYFKNKVKLDG 169
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 346 314 0.00081 116 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 611 (65 KB)
Total size of DFA: 226 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.27u 0.08s 27.35t Elapsed: 00:00:03
Total cpu time: 27.28u 0.08s 27.36t Elapsed: 00:00:03
Start: Fri May 10 21:17:34 2013 End: Fri May 10 21:17:37 2013