BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019107
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana GN=HMT3
PE=1 SV=2
Length = 347
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/333 (75%), Positives = 295/333 (88%), Gaps = 2/333 (0%)
Query: 8 TTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDA 67
T+S MTDFL+KCGGY+VVDGGFATEL+RHGAD+NDPLWSAKCL++SPHLV KVHLDYL++
Sbjct: 9 TSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLES 68
Query: 68 GANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSG 127
GANIIITASYQATIQGF AKG S EAE LLRRSVEI EAREI+Y+RC K SWDF +G
Sbjct: 69 GANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAG 128
Query: 128 RISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF 187
+ S RP+LVAASVGSYGAYLADGSEYSG YGD+VS ETLK+FHRRRV ILA SGADLIAF
Sbjct: 129 KASRRPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGADLIAF 188
Query: 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247
ETIPNKLEA+AYA+LLEEE I IPAWFSF SKDG++V GDS++ECA +ADSC+ VVA+G
Sbjct: 189 ETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNVVAIG 248
Query: 248 INCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWR 307
INCT+PR+IH LI+S+R++T KP+++YPNSGE Y+ KKW++S G +EDFVSY+ KWR
Sbjct: 249 INCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYVSKWR 308
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKSLPSA 340
DAGASLFGGCCRTTPNTI+AI++VLS++ PSA
Sbjct: 309 DAGASLFGGCCRTTPNTIRAIAKVLSDE--PSA 339
>sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana GN=HMT-2
PE=1 SV=1
Length = 333
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/324 (71%), Positives = 276/324 (85%), Gaps = 2/324 (0%)
Query: 12 MTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANI 71
M DFL++ GGY+V+DGG ATE ERHGADLNDPLWSAKCLV+SPHL+ VHLDYL+AGA+I
Sbjct: 9 MKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADI 68
Query: 72 IITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131
I +ASYQATIQGFEAKGFS EE+E+LL++SVEIA EAR YYD+C S +
Sbjct: 69 ISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSS--SMDDKILKK 126
Query: 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP 191
RP+LVAASVGSYGAYLADGSEYSG YGD+++LE LK+FHRRR+ +LA SGADLIAFETIP
Sbjct: 127 RPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAFETIP 186
Query: 192 NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251
NK+EA+A+A+LLEE + IP WFSFNSKDG+NVVSGDSI EC SIA++CE+VVAVGINCT
Sbjct: 187 NKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVGINCT 246
Query: 252 SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGA 311
PRFI GL+L + KVTSKP+++YPNSGE+Y+A+ K+WVE+TGV DEDFVSY+ KW DAG
Sbjct: 247 PPRFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEKWMDAGV 306
Query: 312 SLFGGCCRTTPNTIKAISRVLSNK 335
SL GGCCRTTP TI+AI + L N+
Sbjct: 307 SLLGGCCRTTPTTIRAIHKRLVNR 330
>sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astragalus bisulcatus GN=SMTA
PE=1 SV=1
Length = 338
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/333 (68%), Positives = 279/333 (83%), Gaps = 1/333 (0%)
Query: 8 TTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDA 67
++ +TDFL + G +V+ GG TEL+RHGADLNDPLWSAKCL+S PHL+R+VHLDYL+
Sbjct: 2 SSPLITDFLHQAGRAAVIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLEN 61
Query: 68 GANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSG 127
GA+IIITASYQATIQGF+AKGFS EE EALLRRSVEIA EAR++YY RC + S D
Sbjct: 62 GADIIITASYQATIQGFKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDS 121
Query: 128 RI-SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIA 186
RI RP+L+A SVGSYGAYLADGSE+SG+YGDA+ ETLK+FHRR+V ILA+SG DL+A
Sbjct: 122 RILKQRPILIAGSVGSYGAYLADGSEFSGNYGDAIKSETLKDFHRRKVQILADSGVDLLA 181
Query: 187 FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246
FE +PNKLEA+AYA+LLEEE I PAWF+F SKDG NVVSGDSI EC SIA+SC++VVAV
Sbjct: 182 FEAVPNKLEAQAYADLLEEENIITPAWFAFTSKDGNNVVSGDSIEECGSIAESCDKVVAV 241
Query: 247 GINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKW 306
GINCT PRFIH LIL ++KVT+KP++IYPNSGETY+A K+W +++GV DEDFVSY+ KW
Sbjct: 242 GINCTPPRFIHDLILLLKKVTAKPIVIYPNSGETYDAIRKEWGQNSGVTDEDFVSYVDKW 301
Query: 307 RDAGASLFGGCCRTTPNTIKAISRVLSNKSLPS 339
++GASL GGCCRTTP+TI+ I ++LS+ P+
Sbjct: 302 CESGASLVGGCCRTTPDTIRGIYKILSSGQSPT 334
>sp|Q4VNK0|SMTA_BRAOT Selenocysteine Se-methyltransferase OS=Brassica oleracea var.
italica GN=SMT PE=1 SV=1
Length = 346
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 230/334 (68%), Positives = 279/334 (83%), Gaps = 6/334 (1%)
Query: 1 MVSGSNGTTSF--MTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVR 58
MV+G+ +F M + L++ GGY+++DGG ATELERHGADLNDPLWSAKCL++SPHL+
Sbjct: 1 MVTGNTKAETFYSMKELLKETGGYAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLIH 60
Query: 59 KVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMK 118
VHLDYL+AGA+II +ASYQATIQGFEAKG+S E++E+LLR+SVEIACEAR YYD+C
Sbjct: 61 TVHLDYLEAGADIISSASYQATIQGFEAKGYSIEKSESLLRKSVEIACEARSTYYDKCKD 120
Query: 119 DSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILA 178
D + RP+LVAASVGSYGA+LADGSEYSG YGD ++LETLK+FHRRRV +LA
Sbjct: 121 DD----DKKILKKRPILVAASVGSYGAFLADGSEYSGIYGDLITLETLKDFHRRRVQVLA 176
Query: 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238
SGAD+IAFETIPNKLEA+A+AELL+E IP WFSFNSKDG+NVVSGDSI EC +IA+
Sbjct: 177 ESGADIIAFETIPNKLEAQAFAELLDEGVAKIPGWFSFNSKDGVNVVSGDSIKECIAIAE 236
Query: 239 SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDED 298
+CE+VVAVGINCT PRFI GL+L + KVTSKP+++YPNSGE Y+ E K+WVE+TGV +ED
Sbjct: 237 ACEKVVAVGINCTPPRFIEGLVLEIAKVTSKPILVYPNSGERYDPERKEWVENTGVGNED 296
Query: 299 FVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVL 332
FVSY+ KW DAG SL GGCCRTTP TI+AI + L
Sbjct: 297 FVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRL 330
>sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea mays GN=HMT-2 PE=2 SV=1
Length = 339
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/336 (67%), Positives = 269/336 (80%), Gaps = 8/336 (2%)
Query: 1 MVSGSNGTTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKV 60
+V+ + + ++ GG V+DGG ATELE +GADLNDPLWSAKCL+SSPHL+RKV
Sbjct: 2 VVTAAGSAEEAVRRWVDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKV 61
Query: 61 HLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDS 120
H+DYL+AGANIIITASYQATIQGFE+KGFS E++E LL +SVEIA EARE++ ++ S
Sbjct: 62 HMDYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKS 121
Query: 121 WDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANS 180
PVLVAAS+GSYGAYLADGSEYSGDYG+A + E LK+FHRRR+ +LA +
Sbjct: 122 TPI-------QHPVLVAASLGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEA 174
Query: 181 GADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240
G DLIAFETIPNKLEA+AY ELLEE I IPAWFSFNSKDG+++VSGDS++EC +IAD C
Sbjct: 175 GPDLIAFETIPNKLEAEAYVELLEECNINIPAWFSFNSKDGVHIVSGDSLIECTTIADKC 234
Query: 241 EQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFV 300
+V AVGINCT PRFIHGLILS+RKVT KP++IYPNSGE Y+ E K+WVESTGV D DFV
Sbjct: 235 AKVGAVGINCTPPRFIHGLILSIRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFV 294
Query: 301 SYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSNKS 336
SY+ +W GA L GGCCRTTPNTI+AI R L NKS
Sbjct: 295 SYVNEWCKDGAVLIGGCCRTTPNTIRAIHRTL-NKS 329
>sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea mays GN=HMT-3 PE=2 SV=1
Length = 338
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/332 (66%), Positives = 266/332 (80%), Gaps = 7/332 (2%)
Query: 3 SGSNGTTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHL 62
+ G + ++ GG V+DGG ATELE +GADLNDPLWSAKCL+SSPHL+RKVH+
Sbjct: 4 TAEGGAERAVRRWVDAAGGRLVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHM 63
Query: 63 DYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWD 122
DYL+AGANIIITASYQATIQGFE+KGFS E++E LL +SV+IA EARE++ ++ S
Sbjct: 64 DYLEAGANIIITASYQATIQGFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTP 123
Query: 123 FTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGA 182
P+LVAA++GSYGAYLADGSEYSGDYG+A + E LK+FHRRR+ +LA +G
Sbjct: 124 I-------QHPILVAAALGSYGAYLADGSEYSGDYGEAGTKEFLKDFHRRRLQVLAEAGP 176
Query: 183 DLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQ 242
DLIAFETIPNKLEA+AY ELLEE I IP+W SFNSKDG++VVSGDS++ECA+IAD C +
Sbjct: 177 DLIAFETIPNKLEAQAYVELLEECNINIPSWLSFNSKDGVHVVSGDSLIECATIADKCAK 236
Query: 243 VVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSY 302
V AVGINCT PRFIHGLILS+RKVT KP++IYPNSGE Y+ E K+WVESTGV D DFVSY
Sbjct: 237 VGAVGINCTPPRFIHGLILSIRKVTDKPILIYPNSGERYDGEKKEWVESTGVSDGDFVSY 296
Query: 303 IGKWRDAGASLFGGCCRTTPNTIKAISRVLSN 334
+ +W GA+L GGCCRTTPNTI+AI R L+
Sbjct: 297 VNEWCKDGAALIGGCCRTTPNTIRAIHRTLNQ 328
>sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea mays GN=HMT-4 PE=2 SV=1
Length = 342
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 260/326 (79%), Gaps = 16/326 (4%)
Query: 12 MTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANI 71
+ F+++ GG +VVDGG TELE HGADL+D LWSAKCL S+PHL+RKVHLDYL+AGA++
Sbjct: 14 LRGFVREAGGCAVVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEAGADV 73
Query: 72 IITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131
II+ASYQATI+GF+++GFS +E+E LLRRSV +A EAR + F G SS
Sbjct: 74 IISASYQATIEGFQSRGFSRDESEELLRRSVHVAQEARRV-----------FAAEGDRSS 122
Query: 132 R----PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF 187
R P LVAASVGSYGAY ADGSEYSGDYG +++ E LK FHRRR+ +LA +G DLIAF
Sbjct: 123 RRGRPPALVAASVGSYGAYRADGSEYSGDYGKSMTKEDLKNFHRRRLQVLAGAGPDLIAF 182
Query: 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247
ETIPNKLEA+ YAELLEE GI IPAWFSF SKDG+N SGD I ECA++ADSC +V AVG
Sbjct: 183 ETIPNKLEAQVYAELLEENGIRIPAWFSFTSKDGVNAASGDPINECAAVADSCPRVDAVG 242
Query: 248 INCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVR-DEDFVSYIGKW 306
+NCT+PRFIHGLILS++KVTSKP+++YPNSGETY AE +WV+S G +DFVS +G+W
Sbjct: 243 VNCTAPRFIHGLILSIKKVTSKPIVVYPNSGETYVAETNEWVDSDGATGTDDFVSRVGEW 302
Query: 307 RDAGASLFGGCCRTTPNTIKAISRVL 332
R AGA+L GGCCRT+P T++AI+R +
Sbjct: 303 RRAGAALIGGCCRTSPATVRAIARAV 328
>sp|A4ZGQ8|HMT1_BRAOT Homocysteine S-methyltransferase 1 OS=Brassica oleracea var.
italica GN=HMT1 PE=1 SV=1
Length = 326
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/332 (53%), Positives = 238/332 (71%), Gaps = 7/332 (2%)
Query: 4 GSNGTTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLD 63
G ++ + D ++KCGG +VVDGGFAT+LE HGA +NDPLWSA L+ P L+++VH++
Sbjct: 2 GLEKKSALLEDLIEKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKDPELIKRVHME 61
Query: 64 YLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDF 123
YL+AGA++++T+SYQATI GF ++G S EE+E+LL++SV++A EAR+ ++D+ K S
Sbjct: 62 YLEAGADVVVTSSYQATIPGFLSRGLSMEESESLLQKSVKLAVEARDRFWDKVSKTS--- 118
Query: 124 TGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGAD 183
G +R LVAAS+GSYGAYLADGSEYSG YG+ VSL+ LK+FHRRR+ +L + D
Sbjct: 119 ---GHSYNR-ALVAASIGSYGAYLADGSEYSGSYGEDVSLDKLKDFHRRRIQVLVEASPD 174
Query: 184 LIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQV 243
L+AFETIPNKLEA+A ELLEEE + IPAW F S DG N SG+S EC + +
Sbjct: 175 LLAFETIPNKLEAQACVELLEEENVQIPAWICFTSVDGENAPSGESFQECLETLNKSNNI 234
Query: 244 VAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYI 303
AVGINC P+F+ LI K+T K +++YPNSGE ++ + KKW+ S D +F +
Sbjct: 235 CAVGINCAPPQFMDNLIRKFSKLTQKAIVVYPNSGEVWDGKAKKWLPSQCFGDAEFEMFA 294
Query: 304 GKWRDAGASLFGGCCRTTPNTIKAISRVLSNK 335
KWRD GA L GGCCRTTP+TIKAISR L +
Sbjct: 295 TKWRDLGAKLIGGCCRTTPSTIKAISRDLKRR 326
>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabidopsis thaliana GN=HMT-1
PE=1 SV=1
Length = 326
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/327 (54%), Positives = 238/327 (72%), Gaps = 7/327 (2%)
Query: 9 TSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAG 68
++ + D ++KCGG +VVDGGFAT+LE HGA +NDPLWSA L+ +P L+++VH++YL+AG
Sbjct: 7 SALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 66
Query: 69 ANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGR 128
A+I++T+SYQATI GF ++G S EE+E+LL++SVE+A EAR+ ++++ K SG
Sbjct: 67 ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSK------VSGH 120
Query: 129 ISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE 188
+R LVAAS+GSYGAYLADGSEYSG YG+ VSL+ LK+FHRRR+ +L +G DL+AFE
Sbjct: 121 SYNR-ALVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDLLAFE 179
Query: 189 TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248
TIPNKLEA+A ELLEEE + IPAW F S DG SG+S EC + + AVGI
Sbjct: 180 TIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIYAVGI 239
Query: 249 NCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD 308
NC P+FI LI K+T K +++YPNSGE ++ + K+W+ S D++F + KWRD
Sbjct: 240 NCAPPQFIENLIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFATKWRD 299
Query: 309 AGASLFGGCCRTTPNTIKAISRVLSNK 335
GA L GGCCRTTP+TI AISR L +
Sbjct: 300 LGAKLIGGCCRTTPSTINAISRDLKRR 326
>sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays GN=HMT-1 PE=2 SV=1
Length = 323
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 170/329 (51%), Positives = 239/329 (72%), Gaps = 15/329 (4%)
Query: 12 MTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANI 71
+ D + + GG +V+DGGFAT+LE GAD+NDPLWSA CL++ PHLV++VH+ YL+AGA++
Sbjct: 4 LEDLVARAGGCAVIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADV 63
Query: 72 IITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131
II++SYQATI GF A+G S EAE LLR SV++A EAR+ ++ ++ S
Sbjct: 64 IISSSYQATIPGFIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLR-----------KS 112
Query: 132 RPV----LVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF 187
+P+ LVAAS+GSYGAYLADGSEYSG YG ++ E LK+FHRRR+ +LA++G DLIAF
Sbjct: 113 KPIYNRALVAASIGSYGAYLADGSEYSGSYGADITAEKLKDFHRRRLQVLASAGPDLIAF 172
Query: 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247
E IPN++EA+A ELLEEE + IP+W F+S DG N+ SG+S +C I ++ E+V VG
Sbjct: 173 EAIPNQMEAQALVELLEEEKVQIPSWICFSSVDGKNLCSGESFADCLKILNASEKVAVVG 232
Query: 248 INCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWR 307
+NCT P+FI G+I RK T K + +YPNSGE ++ K+W+ + + F + +W+
Sbjct: 233 VNCTPPQFIEGIICEFRKQTKKAIAVYPNSGEVWDGRAKRWLPVECLGHKSFDALAKRWQ 292
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKS 336
+AGASL GGCCRTTP+TI+A+S++L ++
Sbjct: 293 EAGASLIGGCCRTTPSTIRAVSKILKGRT 321
>sp|O31463|HMT_BACSU Homocysteine S-methyltransferase YbgG OS=Bacillus subtilis (strain
168) GN=ybgG PE=4 SV=1
Length = 315
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 192/306 (62%), Gaps = 14/306 (4%)
Query: 24 VVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQG 83
V+DG ATELER G +LND LWSAK L+ P L+++VH DY AGA+ ITASYQ+T +G
Sbjct: 15 VLDGAMATELERKGCNLNDSLWSAKILMEEPELIKQVHTDYFAAGADCAITASYQSTFEG 74
Query: 84 FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
F A+G S EA L+ SV IA EAR+ + W R++ ++AAS+G Y
Sbjct: 75 FAARGLSEAEARRLIELSVSIAAEARDEF--------WSLE-ENRLNRPKPIIAASIGPY 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
GAYLADGSEY G+Y A+S + L EFHR R+ L +GAD++A ETIP EAKA LL
Sbjct: 126 GAYLADGSEYRGNY--AISEDELIEFHRPRMKALIEAGADVLACETIPCLTEAKAIVRLL 183
Query: 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263
+E T AW SF++KDG+++ G +CAS D Q+ A+GINCT + I LI +
Sbjct: 184 KEFPETY-AWISFSAKDGLHISDGTPAADCASWLDEHRQIAALGINCTPLQHIPSLIEEL 242
Query: 264 RKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPN 323
+K TSKP+I+YPNSGE Y+ E K W + E + + W + GA L GGCCRT P
Sbjct: 243 KKNTSKPIIVYPNSGEQYDPETKTW--NGAACAESYGASARTWHEKGARLIGGCCRTKPE 300
Query: 324 TIKAIS 329
I+ I+
Sbjct: 301 NIQEIA 306
>sp|Q47690|MMUM_ECOLI Homocysteine S-methyltransferase OS=Escherichia coli (strain K12)
GN=mmuM PE=1 SV=2
Length = 310
Score = 243 bits (620), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 182/308 (59%), Gaps = 22/308 (7%)
Query: 24 VVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQG 83
++DG ATELE G +L D LWSAK LV +P L+R+VHLDY AGA ITASYQAT G
Sbjct: 18 LLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAG 77
Query: 84 FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
F A+G +++AL+ +SVE+A +ARE Y + + +LVA SVG Y
Sbjct: 78 FAARGLDEAQSKALIGKSVELARKAREAYL------------AENPQAGTLLVAGSVGPY 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
GAYLADGSEY GDY S+E + FHR RV L ++GADL+A ET+PN E +A AELL
Sbjct: 126 GAYLADGSEYRGDYH--CSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELL 183
Query: 204 EEEGITIP---AWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLI 260
P AWFSF +D ++ G + + ++ QVVA+GINC + +
Sbjct: 184 ----TAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINCIALENTTAAL 239
Query: 261 LSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRT 320
+ +T P+++YPNSGE Y+A K W G Y+ +W+ AGA L GGCCRT
Sbjct: 240 QHLHGLTVLPLVVYPNSGEHYDAVSKTW-HHHGEHCAQLADYLPQWQAAGARLIGGCCRT 298
Query: 321 TPNTIKAI 328
TP I A+
Sbjct: 299 TPADIAAL 306
>sp|Q12525|MHT1_YEAST Homocysteine S-methyltransferase 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MHT1 PE=1 SV=1
Length = 324
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 161/338 (47%), Gaps = 41/338 (12%)
Query: 16 LQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSP---------HLVRKVHLDYLD 66
++ G ++DGG TELE G ++N P+WSA S +V +++ D++
Sbjct: 11 VEHPGKVLILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMI 70
Query: 67 AGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGS 126
AGANI++T +YQA Q ++ S + A R + D+ + + +F G
Sbjct: 71 AGANILMTITYQANFQSI-SENTSIKTLAAYKR------------FLDKIVSFTREFIGE 117
Query: 127 GRISSRPVLVAASVGSYGAYLADGSEYSGDYG-DAVSLETLKEFHRRRVLILANSGADLI 185
R + S+G + A+++ EY+GDYG +++ F + N DLI
Sbjct: 118 ER------YLIGSIGPWAAHVS--CEYTGDYGPHPENIDYYGFFKPQLENFNQNRDIDLI 169
Query: 186 AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC----- 240
FETIPN E KA +E+ I+ P + + D + G ++ E +
Sbjct: 170 GFETIPNFHELKAILSW-DEDIISKPFYIGLSVDDNSLLRDGTTLEEISVHIKGLGNKIN 228
Query: 241 EQVVAVGINCTSPRFIHGLILSV--RKVTSKPVIIYPNSGETYNAELKKWVESTGVRDED 298
+ ++ +G+NC S LIL + + P+++YPNSGE YN + K W T D D
Sbjct: 229 KNLLLMGVNCVSFN-QSALILKMLHEHLPGMPLLVYPNSGEIYNPKEKTWHRPTNKLD-D 286
Query: 299 FVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSNKS 336
+ + + K+ D GA + GGCCRT+P I I+ + S
Sbjct: 287 WETTVKKFVDNGARIIGGCCRTSPKDIAEIASAVDKYS 324
>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAM4 PE=1 SV=1
Length = 325
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 157/327 (48%), Gaps = 48/327 (14%)
Query: 24 VVDGGFATELERHGADLNDPLWSAKCLVS----------SPHLVRKVHLDYLDAGANIII 73
V+DGG TELE G + +P+WS +S + +V+++ D+L+AGA I++
Sbjct: 19 VLDGGQGTELENRGIKVANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAGAEILM 78
Query: 74 TASYQATIQGF-EAKGFST-EEAEALLRRSVEIA--CEAREIYYDRCMKDSWDFTGSGRI 129
T +YQ + + E T E LL R V+ + C + Y C
Sbjct: 79 TTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFSRNCIGEDKYLIGC------------- 125
Query: 130 SSRPVLVAASVGSYGAYLADGSEYSGDYG-DAVSLETLKEFHRRRVLILANSGADLIAFE 188
+G +GA++ E++GDYG + +++ + F + N DLI FE
Sbjct: 126 ----------IGPWGAHIC--REFTGDYGAEPENIDFYQYFKPQLENFNKNDKLDLIGFE 173
Query: 189 TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS-IADSCEQVVA-- 245
TIPN E KA +E ++ P + + + + G ++ E A I D +++
Sbjct: 174 TIPNIHELKAILSW-DESILSRPFYIGLSVHEHGVLRDGTTMEEIAQVIKDLGDKINPNF 232
Query: 246 --VGINCTSPRFIHGLILSVRK-VTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSY 302
+GINC S ++ S+ + + + ++ YPNSGE Y+ E K W+ ++ + + +
Sbjct: 233 SFLGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSD-KLNSWDTV 291
Query: 303 IGKWRDAGASLFGGCCRTTPNTIKAIS 329
+ ++ +GA + GGCCRT+P I+ IS
Sbjct: 292 VKQYISSGARIIGGCCRTSPKDIQEIS 318
>sp|Q9AJQ8|METH_VIBFI Methionine synthase OS=Vibrio fischeri GN=metH PE=3 SV=1
Length = 1226
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 131/298 (43%), Gaps = 29/298 (9%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109
++S P ++R +H YL+AGA+I+ T ++ AT + + E+L S EI EA
Sbjct: 59 VLSQPQIIRDIHEAYLEAGADILETNTFNAT-----TIAMADYDMESL---SEEINFEAA 110
Query: 110 EIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169
++ R + D W + + ++P VA +G + + + VS + L E
Sbjct: 111 KLA--REVADKW----TEKTPNKPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEA 164
Query: 170 HRRRVLILANSGADLIAFETIPNKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVV 225
+ L G+DLI ETI + L AK A + EE GIT+P S D
Sbjct: 165 YSESTRALIRGGSDLILIETIFDTLNAKACSFAVESVFEELGITLPVMISGTITDASGRT 224
Query: 226 SGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE 284
E A + ++ G+NC P + + + +++ V +PN+G
Sbjct: 225 LSGQTTEAFYNALRHVKPISFGLNCALGPDELREYVSELSRISECYVSAHPNAG------ 278
Query: 285 LKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSN---KSLP 338
L + ED ++ +W +G +L GGCC TTP I+ ++ V+ + LP
Sbjct: 279 LPNAFGEYDLSPEDMAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVEGVKPRQLP 336
>sp|Q87L95|METH_VIBPA Methionine synthase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=metH PE=3 SV=1
Length = 1226
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 41/304 (13%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQAT---IQGFEAKGFSTEEAEALLRRSVEIAC 106
++S P L++++H YL+AGA+I+ T ++ AT + +E + S E A + + E+A
Sbjct: 58 VLSQPQLIKEIHSAYLEAGADILETNTFNATTIAMADYEMESLSEEINFAAAKLAREVA- 116
Query: 107 EAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166
D W + + +P VA +G + + + VS + L
Sbjct: 117 ------------DEW----TAKTPDKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDEL 160
Query: 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGI 222
E + L GADLI ETI + L AKA A + EE G+ +P S D
Sbjct: 161 VEAYSESTRALIRGGADLILIETIFDTLNAKACAFAVDSVFEELGVALPVMISGTITDAS 220
Query: 223 -NVVSGDSILECASIADSCEQV--VAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG 278
+SG + + +S V ++ G+NC P + + + +++ V +PN+G
Sbjct: 221 GRTLSGQT---TEAFYNSLRHVRPLSFGLNCALGPDELRPYVEELSRISESFVSAHPNAG 277
Query: 279 ETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRV---LSN 334
L + ED ++ +W +G +L GGCC TTP I+ +++ ++
Sbjct: 278 ------LPNAFGEYDLSPEDMAEHVKEWASSGFLNLIGGCCGTTPEHIRQMAQAVEGVTP 331
Query: 335 KSLP 338
++LP
Sbjct: 332 RALP 335
>sp|Q9KUW9|METH_VIBCH Methionine synthase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=metH PE=3 SV=1
Length = 1226
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQAT---IQGFEAKGFSTEEAEALLRRSVEIAC 106
+++ P +++++H YL+AGA+I+ T ++ +T + ++ + S E A + + E+A
Sbjct: 58 VLTQPQIIKEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVA- 116
Query: 107 EAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166
D W + + SRP VA +G + + + V+ + L
Sbjct: 117 ------------DEW----TAKDPSRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGL 160
Query: 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGI 222
E + L G+DLI ETI + L AKA A + EE GI++P S D
Sbjct: 161 VEAYSESTRALIKGGSDLILIETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDAS 220
Query: 223 NVVSGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETY 281
E A + ++ G+NC P + + + +++ V +PN+G
Sbjct: 221 GRTLSGQTTEAFYNALRHVRPISFGLNCALGPDELRQYVEELSRISECYVSAHPNAG--- 277
Query: 282 NAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSN---KSL 337
L + E+ +I +W AG +L GGCC TTP I AI++ + ++L
Sbjct: 278 ---LPNAFGEYDLSAEEMAEHIAEWAQAGFLNLVGGCCGTTPEHIAAIAKAVEGVKPRAL 334
Query: 338 PSANLNIQM 346
P + ++
Sbjct: 335 PDLKVECRL 343
>sp|Q5E814|METH_VIBF1 Methionine synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114)
GN=metH PE=3 SV=1
Length = 1226
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 29/298 (9%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109
++S P ++R +H YL+AGA+I+ T ++ AT + + E+L S EI EA
Sbjct: 59 VLSQPQIIRDIHEAYLEAGADILETNTFNAT-----TIAMADYDMESL---SEEINFEAA 110
Query: 110 EIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169
++ R + D W + + ++P VA +G + + + VS + L E
Sbjct: 111 KLA--REVADKW----TEKTPNKPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDELVEA 164
Query: 170 HRRRVLILANSGADLIAFETIPNKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVV 225
+ L G+DLI ETI + L AK A + EE IT+P S D
Sbjct: 165 YSESTRALIRGGSDLILIETIFDTLNAKACSFAVESVFEELDITLPVMISGTITDASGRT 224
Query: 226 SGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE 284
E A + ++ G+NC P + + + +++ V +PN+G
Sbjct: 225 LSGQTTEAFYNALRHVKPISFGLNCALGPDELREYVSDLSRISECYVSAHPNAG------ 278
Query: 285 LKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSN---KSLP 338
L + ED ++ +W +G +L GGCC TTP I+ ++ V+ + LP
Sbjct: 279 LPNAFGEYDLSPEDMAEHVAEWASSGFLNLIGGCCGTTPEHIRQMALVVEGVKPRQLP 336
>sp|Q7MHB1|METH_VIBVY Methionine synthase OS=Vibrio vulnificus (strain YJ016) GN=metH
PE=3 SV=1
Length = 1226
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 38/299 (12%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQAT---IQGFEAKGFSTEEAEALLRRSVEIAC 106
+++ P L++++H YL+AGA+I+ T ++ AT + ++ + S E
Sbjct: 58 VLTQPQLIKEIHHAYLEAGADILETNTFNATTIAMADYDMESLSEE-------------I 104
Query: 107 EAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166
R D W + + ++P VA +G + + + VS + L
Sbjct: 105 NFAAAKLAREAADEW----TAKNPAKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDEL 160
Query: 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGI 222
E + L G+DLI ETI + L AKA A + EE G +P S D
Sbjct: 161 VEAYSESTRALIRGGSDLILIETIFDTLNAKACAFAVESVFEELGFALPVMISGTITDAS 220
Query: 223 -NVVSGDSILECASIADSCEQV--VAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG 278
+SG + + +S V ++ G+NC P + + + +++ V +PN+G
Sbjct: 221 GRTLSGQT---TEAFYNSLRHVRPISFGLNCALGPDELRPYVEELSRISETFVSTHPNAG 277
Query: 279 ETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSNKS 336
L + E+ ++ +W +G +L GGCC TTP I+ ++ + +S
Sbjct: 278 ------LPNAFGEYDLSPEEMAEHVKEWAQSGFLNLIGGCCGTTPEHIRHMAMAVEGES 330
>sp|Q4JIJ3|METH_BOVIN Methionine synthase OS=Bos taurus GN=MTR PE=2 SV=1
Length = 1265
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 144/332 (43%), Gaps = 44/332 (13%)
Query: 24 VVDGGFATELERH--------GADLND---PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
V+DGG T ++RH G + D PL ++S P+++ ++H +YL AGA+
Sbjct: 32 VLDGGMGTMIQRHKLSEEDFRGQEFKDHARPLKGNNDILSITQPNVIYQIHKEYLLAGAD 91
Query: 71 IIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130
II T ++ +T G R ++ A AR+ D ++ TG R
Sbjct: 92 IIETNTFSSTSIAQADYGLE----HLAYRMNMCSAGVARKAAEDISLQ-----TGIKR-- 140
Query: 131 SRPVLVAASVGSYGAYLA-DGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET 189
VA ++G L+ S DY + ++ + L E ++ + L + G D++ ET
Sbjct: 141 ----YVAGALGPTNKTLSVSPSVERPDYRN-ITFDELVEAYKEQAKGLLDGGVDILLIET 195
Query: 190 IPNKLEAKA----YAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245
I + AKA +L EEE + P + S D E I+ S +
Sbjct: 196 IFDTANAKAALFAVQKLFEEEYVPRPVFISGTIVDKSGRTLSGQTGEAFVISVSHADPLC 255
Query: 246 VGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG--ETYNAELKKWVESTGVRDEDFVSY 302
+G+NC + I ++ K T+ V+ YPN+G T+ + + + +DF
Sbjct: 256 IGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTF-GDYDETPHVMAMHLKDFAV- 313
Query: 303 IGKWRDAGASLFGGCCRTTPNTIKAISRVLSN 334
D ++ GGCC TTP+ I+ I+ + N
Sbjct: 314 -----DGLVNIVGGCCGTTPDHIREIAEAVKN 340
>sp|Q8DCJ7|METH_VIBVU Methionine synthase OS=Vibrio vulnificus (strain CMCP6) GN=metH
PE=3 SV=1
Length = 1226
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 41/304 (13%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQAT---IQGFEAKGFSTEEAEALLRRSVEIAC 106
+++ P L++++H YL+AGA+I+ T ++ AT + ++ + S E
Sbjct: 58 VLTQPQLIKEIHHAYLEAGADILETNTFNATTIAMADYDMESLSEE-------------I 104
Query: 107 EAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166
R D W + + ++P VA +G + + + VS + L
Sbjct: 105 NFAAARLAREAADEW----TAQNPAKPRYVAGVLGPTNRTCSISPDVNDPGYRNVSFDEL 160
Query: 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGI 222
E + L G+DLI ETI + L AKA A + EE G +P S D
Sbjct: 161 VEAYSESTRALIRGGSDLILIETIFDTLNAKACAFAVDSVFEELGFALPVMISGTITDAS 220
Query: 223 -NVVSGDSILECASIADSCEQV--VAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG 278
+SG + + +S V ++ G+NC P + + + +++ V +PN+G
Sbjct: 221 GRTLSGQT---TEAFYNSLRHVRPISFGLNCALGPDELRPYVEELSRISETFVSTHPNAG 277
Query: 279 ETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRV---LSN 334
L + E+ ++ +W +G +L GGCC TTP I+ ++ +S
Sbjct: 278 ------LPNAFGEYDLSPEEMAEHVKEWAQSGFLNLIGGCCGTTPEHIRHMAMAVEGVSP 331
Query: 335 KSLP 338
+ LP
Sbjct: 332 RVLP 335
>sp|Q5XGM3|BHMT1_XENLA Betaine--homocysteine S-methyltransferase 1 OS=Xenopus laevis
GN=bhmt PE=2 SV=1
Length = 403
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 137/326 (42%), Gaps = 54/326 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AGAN++ T ++ A+ E
Sbjct: 23 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYASDDKLE 81
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G AE + + V E+AC+ ARE+ + LVA V
Sbjct: 82 NRGNYV--AEKISGQKVNEVACDIAREV-----------------ANEGDALVAGGVSQT 122
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE +K R+++ + D + E + EA E+L
Sbjct: 123 PSYLSCKSEVE-----------VKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVL 171
Query: 204 EEEGITIPAWFSFNSKDGINVVSGDSILECA-SIADSCEQVVAVGINC---------TSP 253
+E G + A + +N VS ECA +A + V VG+NC T
Sbjct: 172 KESGKPVAATLCIGPEGDLNGVSPG---ECAVRLAKAGASV--VGVNCHFDPMTCVATVK 226
Query: 254 RFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
GL+ + K + ++P+ + P+ G+ +L ++ +E V D Y
Sbjct: 227 LMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYARAAY 286
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLS 333
D G GGCC P +AI+ L+
Sbjct: 287 DLGVRYIGGCCGFEPYHTRAIAEELA 312
>sp|P37586|METH_SALTY Methionine synthase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=metH PE=3 SV=3
Length = 1227
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 29/299 (9%)
Query: 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEA 108
++S P ++ +H Y +AGA+II T ++ +T + E+L S EI A
Sbjct: 56 LVLSKPEVIAAIHNAYFEAGADIIETNTFNST-----TIAMADYRMESL---SAEINYAA 107
Query: 109 REIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKE 168
++ D W + R +P VA +G + + + ++ + L
Sbjct: 108 AKLAR--ACADEW----TARTPEKPRFVAGVLGPTNRTASISPDVNDPAFRNITFDQLVA 161
Query: 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE----GITIPAWFSFNSKDGINV 224
+R L GADLI ET+ + L AKA ++EE G+ +P S D
Sbjct: 162 AYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKEEFEALGVDLPIMISGTITDASGR 221
Query: 225 VSGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283
E + + + G+NC P + + + ++ V +PN+G
Sbjct: 222 TLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG----- 276
Query: 284 ELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSN---KSLP 338
L + + I +W +AG ++ GGCC TTP I A+SR ++ + LP
Sbjct: 277 -LPNAFGEYDLDADTMAKQIREWAEAGFLNIVGGCCGTTPEHIAAMSRAVAGLLPRQLP 334
>sp|Q5M8Z0|BHMT1_XENTR Betaine--homocysteine S-methyltransferase 1 OS=Xenopus tropicalis
GN=bhmt PE=2 SV=1
Length = 403
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 134/326 (41%), Gaps = 54/326 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AGAN++ T ++ A+ E
Sbjct: 23 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYASDDKLE 81
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G A+ + + V E AC+ ARE+ + LVA V
Sbjct: 82 NRGNYV--AKKISGQKVNEAACDIAREV-----------------ANEGDALVAGGVSQT 122
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE +K R+++ + D + E + EA E+L
Sbjct: 123 PSYLSCKSEVE-----------VKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVL 171
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINC---------TSP 253
+E G + A + +N V G+ + A S VG+NC T
Sbjct: 172 KESGKPVAATLCIGPQGDLNGVTPGECAVRLAKAGAS-----VVGVNCHFDPMTCIATVK 226
Query: 254 RFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
GL+ + K + ++P+ + P+ G+ +L ++ +E V D Y +
Sbjct: 227 LMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYAREAY 286
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLS 333
+ G GGCC P +AI+ L+
Sbjct: 287 NLGVRYIGGCCGFEPYHTRAIAEELA 312
>sp|P13009|METH_ECOLI Methionine synthase OS=Escherichia coli (strain K12) GN=metH PE=1
SV=5
Length = 1227
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 29/299 (9%)
Query: 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEA 108
++S P ++ +H Y +AGA+II T ++ +T + + E+L S EI A
Sbjct: 56 LVLSKPEVIAAIHNAYFEAGADIIETNTFNST-----TIAMADYQMESL---SAEINFAA 107
Query: 109 REIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKE 168
++ R D W + R +P VA +G + + + ++ + L
Sbjct: 108 AKLA--RACADEW----TARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVA 161
Query: 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE----GITIPAWFSFNSKDGINV 224
+R L GADLI ET+ + L AKA ++ E G+ +P S D
Sbjct: 162 AYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGR 221
Query: 225 VSGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283
E + + + G+NC P + + + ++ V +PN+G
Sbjct: 222 TLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAG----- 276
Query: 284 ELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRV---LSNKSLP 338
L + + I +W AG ++ GGCC TTP I A+SR L+ + LP
Sbjct: 277 -LPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLP 334
>sp|O06745|YITJ_BACSU Bifunctional homocysteine
S-methyltransferase/5,10-methylenetetrahydrofolate
reductase OS=Bacillus subtilis (strain 168) GN=yitJ PE=2
SV=1
Length = 612
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 63/315 (20%)
Query: 26 DGGFATELERHGADLNDPLWSAKCL----VSSPHLVRKVHLDYLDAGANIIITASYQATI 81
DG T L +G D +C +S P ++++H Y++AGANII T +Y A
Sbjct: 15 DGAMGTLLYSYGID--------RCFEELNISKPEEIQRIHKAYVEAGANIIQTNTYGANY 66
Query: 82 QGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141
G ++ + + + +V+IA R S+ V ++G
Sbjct: 67 IKLSRHGLE-DDIKKMNQEAVKIA----------------------RASAGDAYVLGTMG 103
Query: 142 SYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAE 201
+ +A SL+ +K R ++ +L + D + ET + EA+ +
Sbjct: 104 GIRTF----------NKNAYSLDEIKRSFREQLYLLLHEEPDGLLLETYYDLEEAREVLK 153
Query: 202 LLEEEGITIPAWFSFNSKDGINVVSGDSILECA-SIADSCEQVVAVGINCTSPRFIHGLI 260
+ +E +P + + + + G + + SIAD + VGINC G
Sbjct: 154 IARKE-TDLPIMLNVSMHEQGVLQDGTPLSDALRSIADLGADI--VGINCRL-----GPY 205
Query: 261 LSVRKVTSKPVI------IYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314
+ ++ P+ +YPNS E + E+ D F + ++R GA +
Sbjct: 206 HMIEALSEVPIFDDVFLSVYPNSSLPSLEEGRLVYETD---DTYFQNSASEFRKQGARII 262
Query: 315 GGCCRTTPNTIKAIS 329
GGCC TTPN I+A++
Sbjct: 263 GGCCGTTPNHIRAMA 277
>sp|P87138|YDM7_SCHPO Uncharacterized protein C57A7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC57A7.07c PE=4 SV=2
Length = 308
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 44/325 (13%)
Query: 24 VVDGGFATELERHGADLNDP-LWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQ--AT 80
++DGG L + +++ LW+++ LV P +V K H ++L +II T +YQ A+
Sbjct: 3 MLDGGSTAILPKLPESISESRLWTSEALVRYPEIVVKHHEEFLKV-CDIISTFTYQLDAS 61
Query: 81 IQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140
I + +G ++ A S+ + ARE + +A +
Sbjct: 62 IYDEKVEGVPLKQVYA---NSIGLPVYARE-----------------HLGLPNKYIALCL 101
Query: 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGA------DLIAFETIPNKL 194
GS+ A + EY Y E L FH+ R+ + S D IAFE++P+
Sbjct: 102 GSHAATIPGCMEYKMIYDKPTDFEMLYNFHKNRIEAIQASNPKAFEKIDFIAFESLPHVT 161
Query: 195 EAKAYAELLEE-EGITIPAWFSFN--SKDGINVVSGDSILECASIADSCEQVVAVGINCT 251
EA+ +L+++ +G + W + + I VS + DS + +G+NC
Sbjct: 162 EAEVVCQLIQDMKGWSKRCWITCTCPERSTIERVSSIISKILSINHDS---IWGIGVNCF 218
Query: 252 SPRFIHGL--ILSVRKVTSKPVIIYPNSGETYNAELKKW----VESTGVRDEDFVSYIGK 305
+ + +LS ++ I+YP+ Y + + E++ + K
Sbjct: 219 HLSLLEPIAKMLSSLLPSNITAILYPDGRGLYQNPDGTFSPGSTDHPAPSPEEWSTITAK 278
Query: 306 WRDA--GASLFGGCCRTTPNTIKAI 328
+ + G + GGCC T N + +
Sbjct: 279 YSNLHNGNLILGGCCETNYNHLSLL 303
>sp|Q54P92|METH_DICDI Methionine synthase OS=Dictyostelium discoideum GN=mtr PE=3 SV=1
Length = 1260
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 129/324 (39%), Gaps = 41/324 (12%)
Query: 24 VVDGGFATELERHGADLND-----------PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
V+DG TE+++ ND L L+S PH++R++H YL+AGA+
Sbjct: 26 VLDGAMGTEIQKFKLKDNDYRGEEFKDFPHELGGNNDLLSLTQPHIIREIHCKYLEAGAD 85
Query: 71 IIITASYQATIQGFEAKGFSTEEAEALLRR-SVEIACEAREIYYDRCMKDSWDFTGSGRI 129
I T ++ I F + E L++R ++E A A+ + KD
Sbjct: 86 FIETNTFNGNI--FSQADYKMEH---LVKRINIESARLAKSACEEYTKKD---------- 130
Query: 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET 189
SRP V +VG + V + L + +V L G D+I ET
Sbjct: 131 PSRPRFVCGAVGPTNKTASISPSVERPEARNVLFDELVSGYLEQVEALVEGGIDVILVET 190
Query: 190 IPNKLEAKAYAELLEEEGIT----IPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245
+ + L KA +EE T +P + S D E + + ++
Sbjct: 191 VFDSLNCKAALFAIEEFFKTYSPRLPVFVSGTIVDKSGRTLSGQTGEAFYTSVASANLMV 250
Query: 246 VGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIG 304
G+NC + + + ++ K + V YPN+G L E I
Sbjct: 251 FGLNCALGAQEMRPFLQNISKCSECYVSCYPNAG------LPNTFGGYDETPEMMAEQIK 304
Query: 305 KWRDAG-ASLFGGCCRTTPNTIKA 327
++ ++G ++ GGCC T+P+ I+A
Sbjct: 305 EFAESGLLNIVGGCCGTSPDHIRA 328
>sp|O35490|BHMT1_MOUSE Betaine--homocysteine S-methyltransferase 1 OS=Mus musculus GN=Bhmt
PE=2 SV=1
Length = 407
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 137/336 (40%), Gaps = 56/336 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G AE + + V E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYV--AEKISGQKVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE +K+ R+++ + D + E + EA E L
Sbjct: 126 PSYLSCKSEVE-----------VKKIFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEAL 174
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINC---------TSP 253
+ G + A + ++ V G+ + S VG+NC T
Sbjct: 175 KASGKPVAATMCIGPEGDLHGVPPGECAVRLVKAGASI-----VGVNCHFDPSVSLQTVK 229
Query: 254 RFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
GL + K + S+P+ + P+ G+ +L ++ +E D Y +
Sbjct: 230 LMKEGLEAARLKAYLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAY 289
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ G GGCC P I+AI+ L+ + LP A+
Sbjct: 290 NLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 325
>sp|Q9Z2Q4|METH_RAT Methionine synthase OS=Rattus norvegicus GN=Mtr PE=2 SV=1
Length = 1253
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 145/342 (42%), Gaps = 63/342 (18%)
Query: 24 VVDGGFATELERH--------GADLND---PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
V+DGG T ++R+ G + D PL ++S P ++ ++H +YL AGA+
Sbjct: 19 VLDGGMGTMIQRYKLSEENFQGQEFKDHSRPLKGNNDILSITQPDVIYQIHKEYLLAGAD 78
Query: 71 IIITASYQATI-----QGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTG 125
II T ++ +T G E + + A + R A EI TG
Sbjct: 79 IIETNTFSSTSIAQADYGLEHLAYRMNKCSADVARKA-----AEEITLQ---------TG 124
Query: 126 SGRISSRPVLVAASVGSYGAYLA-DGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADL 184
R VA S+G L+ S DY + ++ + L E ++ + L + G D+
Sbjct: 125 VKR------FVAGSLGPTNKTLSVSPSVERPDYRN-ITFDELVEAYQEQAKGLLDGGVDI 177
Query: 185 IAFETIPNKLEAK----AYAELLEE-----EGITIPAWFSFNSKDGINVVSGDSILECAS 235
+ ETI + AK A +L EE I I S ++ +G++ + S
Sbjct: 178 LLIETIFDTANAKAALFALQKLFEENYASPRPIFISGTIVDKSGRTLSGQTGEAFVTSVS 237
Query: 236 IADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG--ETYNAELKKWVEST 292
+D + +G+NC + I ++ K T+ V+ YPN+G T+ + +
Sbjct: 238 HSDP----LCIGLNCALGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTF-GDYDETPAMM 292
Query: 293 GVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSN 334
+ +DF D ++ GGCC +TP+ I+ I+ + N
Sbjct: 293 AMHLKDFAV------DGLVNVVGGCCGSTPDHIREIAEAVKN 328
>sp|Q09582|METH_CAEEL Probable methionine synthase OS=Caenorhabditis elegans GN=nos-1
PE=1 SV=1
Length = 1249
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 132/332 (39%), Gaps = 45/332 (13%)
Query: 24 VVDGGFATELER--------HGADLND---PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
++DG T ++R G L D PL L+S P ++ K+H YL+AGA+
Sbjct: 20 IIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGAD 79
Query: 71 IIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACE--AREIYYDRCMKDSWDFTGSGR 128
+ T ++ T A+A R CE EI Y + G
Sbjct: 80 FVETNTFSGTTI-----------AQADYR------CEHLVHEINYQSALVARRACDDVGA 122
Query: 129 ISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE 188
+ R V ++G L+ V+ + L + + + L G D++ E
Sbjct: 123 ATGRRRYVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLLVE 182
Query: 189 TIPNKLEAKA----YAELLEEEGIT-IPAWFSFNSKDGINVVSGDSILECASIADSCEQV 243
T+ + AKA L E+EG+ +P + S D E ++ +
Sbjct: 183 TVFDSANAKAALFAIRTLFEDEGVPEMPVFLSGTIVDMSGRTLSGQTGEAFLVSTKQGKP 242
Query: 244 VAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSY 302
+AVG+NC + + + ++ K + +I YPN+G L + E+
Sbjct: 243 MAVGLNCALGAKDMRQFVDNMSKWSDSFIICYPNAG------LPNALGGYDETPEEMADV 296
Query: 303 IGKW-RDAGASLFGGCCRTTPNTIKAISRVLS 333
+ ++ RD ++ GGCC TTP+ I A+ + +
Sbjct: 297 LREFARDGLVNIIGGCCGTTPDHINAMYKAVQ 328
>sp|O09171|BHMT1_RAT Betaine--homocysteine S-methyltransferase 1 OS=Rattus norvegicus
GN=Bhmt PE=1 SV=1
Length = 407
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 136/335 (40%), Gaps = 54/335 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G AE + + V E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYV--AEKISGQKVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE E K FH +++ + D + E + EA E L
Sbjct: 126 PSYLSCKSE----------TEVKKIFH-QQLEVFMKKNVDFLIAEYFEHVEEAVWAVEAL 174
Query: 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC-----TSPRFIHG 258
+ G I A + ++ VS ECA + VG+NC TS + I
Sbjct: 175 KTSGKPIAATMCIGPEGDLHGVSPG---ECAVRLVKAGAAI-VGVNCHFDPSTSLQTIKL 230
Query: 259 LILSVRKVTSKPVII-------YPNSGETYNAELKKW---VESTGVRDEDFVSYIGKWRD 308
+ + K ++ P+ G+ +L ++ +E D Y + +
Sbjct: 231 MKEGLEAARLKAYLMSHALAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYN 290
Query: 309 AGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
G GGCC P I+AI+ L+ + LP A+
Sbjct: 291 LGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 325
>sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR PE=1 SV=2
Length = 1265
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 50/335 (14%)
Query: 24 VVDGGFATELER--------HGADLND---PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
V+DGG T ++R G + D PL ++S P ++ ++H +YL AGA+
Sbjct: 32 VLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYLLAGAD 91
Query: 71 IIITASYQATI-----QGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTG 125
II T ++ +T G E + A + R A E+ TG
Sbjct: 92 IIETNTFSSTSIAQADYGLEHLAYRMNMCSAGVARKA-----AEEVTLQ---------TG 137
Query: 126 SGRISSRPVLVAASVGSYGAYLA-DGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADL 184
R VA ++G L+ S DY + ++ + L E ++ + L + G D+
Sbjct: 138 IKR------FVAGALGPTNKTLSVSPSVERPDYRN-ITFDELVEAYQEQAKGLLDGGVDI 190
Query: 185 IAFETIPNKLEAKA----YAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240
+ ETI + AKA L EE+ P + S D E I+ S
Sbjct: 191 LLIETIFDTANAKAALFALQNLFEEKYAPRPIFISGTIVDKSGRTLSGQTGEGFVISVSH 250
Query: 241 EQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDF 299
+ + +G+NC + I + K T+ V+ YPN+G + E+ + +
Sbjct: 251 GEPLCIGLNCALGAAEMRPFIEIIGKCTTAYVLCYPNAG--LPNTFGDYDETPSMMAKHL 308
Query: 300 VSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSN 334
+ D ++ GGCC +TP+ I+ I+ + N
Sbjct: 309 KDFA---MDGLVNIVGGCCGSTPDHIREIAEAVKN 340
>sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=metH PE=3 SV=1
Length = 1234
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 122/291 (41%), Gaps = 26/291 (8%)
Query: 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAR 109
L+S P +++ + YLDAGA+I+ T ++ AT G + E +VE A AR
Sbjct: 64 LLSRPDVIQAIEKAYLDAGADILETNTFNATQVSQADYGMQSLAYEL----NVEGARLAR 119
Query: 110 EIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169
++ + + +P VA +G + + + V+ + L E
Sbjct: 120 QVADAK----------TAETPDKPRFVAGVLGPTSRTCSISPDVNNPGYRNVTFDELVEN 169
Query: 170 HRRRVLILANSGADLIAFETIPNKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVV 225
+ L GADLI ETI + L AK A + EE G+ +P S D
Sbjct: 170 YVEATRGLIEGGADLILIETIFDTLNAKAAIFAVQGVFEELGVELPIMISGTITDASGRT 229
Query: 226 SGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE 284
E + + ++VG+NC + + I + V +PN+G NA
Sbjct: 230 LSGQTTEAFWNSVRHARPISVGLNCALGAKELRPYIEELSTKADTHVSAHPNAG-LPNA- 287
Query: 285 LKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLSN 334
++ ES + + ++ AG ++ GGCC TTP I+AI++ ++
Sbjct: 288 FGEYDESPA----EMAVVVEEFAAAGFLNIVGGCCGTTPAHIEAIAKAVAK 334
>sp|Q5I597|BHMT1_BOVIN Betaine--homocysteine S-methyltransferase 1 OS=Bos taurus GN=BHMT
PE=2 SV=1
Length = 407
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 131/326 (40%), Gaps = 54/326 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G AE + + V E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYV--AEKISGQKVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE +K+ ++++ + D + E + EA E L
Sbjct: 126 PSYLSCKSETE-----------VKKVFQQQLEVFVKKNVDFLIAEYFEHVEEAVWAVEAL 174
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262
+ G + A + ++ V G+ + S VG+NC I +
Sbjct: 175 KASGKPVAATMCIGPEGDLHSVTPGECAVRLVKAGASI-----VGVNCHFDPTISLQTVK 229
Query: 263 VRK-----------VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
+ K + S+P+ + P+ G+ +L ++ +E D Y +
Sbjct: 230 LMKEGLEAAGLKAHLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAY 289
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLS 333
+ G GGCC P I+AI+ L+
Sbjct: 290 NLGVRYIGGCCGFEPYHIRAIAEELA 315
>sp|Q5RF32|BHMT2_PONAB S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Pongo
abelii GN=BHMT2 PE=2 SV=1
Length = 363
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 144/358 (40%), Gaps = 64/358 (17%)
Query: 3 SGSNGTTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHL 62
+G G + + L+ G + DG F LE+ G + LW+ + ++ P VR++H+
Sbjct: 4 AGHPGAKRGILERLES-GEVVIGDGSFLITLEKRGY-VKAGLWTPEAVIEHPDAVRQLHM 61
Query: 63 DYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACE-AREIYYDRCMKDSW 121
++L AG+N++ T ++ A+ E+K A AC+ ARE+
Sbjct: 62 EFLRAGSNVMQTFTFSASEDNMESKWEDVNAA----------ACDLAREV---------- 101
Query: 122 DFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSG 181
G G LVA + Y +Y D +K+ R+++ + A
Sbjct: 102 --AGKGD-----ALVAGGICQTSIY-----KYHKDEA------RIKKLFRQQLEVFAWKN 143
Query: 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK-DGINVVSGDSILECASIADSC 240
D + E + EA E+L+E + + + D ++ G+ + S
Sbjct: 144 VDFLIAEYFEHVEEAVWAVEVLKESDRPVAVTMCISPEGDMHDITPGECAVRLVKAGASI 203
Query: 241 EQVVAVGINC-----TSPRFIHGLILSVRKVTSKPVIIY-------PNSGETYNAELKKW 288
VG+NC TS + I + +++ K ++ P+ G+ +L ++
Sbjct: 204 -----VGVNCRFGPETSLKTIELMKEGLQRAGLKAHLMVQPLGFHTPDCGKEGFVDLPEY 258
Query: 289 ---VESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ES D Y + + G GGCC P I+AI+ L+ + LP A+
Sbjct: 259 PFGLESRAATRWDIQKYAREAYNQGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 316
>sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR321C PE=4
SV=1
Length = 105
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 246 VGINCTSPRFIHGLILSVRK-VTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIG 304
+GINC S ++ S+ + + + ++ YPNSGE Y+ E K W+ ++ + + + +
Sbjct: 15 LGINCVSFNQSPDILESLHQALPNMALLAYPNSGEVYDTEKKIWLPNSD-KLNSWDTVVK 73
Query: 305 KWRDAGASLFGGCCRTTPNTIKAIS 329
++ +GA + GGCCRT+P I+ IS
Sbjct: 74 QYISSGARIIGGCCRTSPKDIQEIS 98
>sp|Q32LQ4|BHMT1_DANRE Betaine--homocysteine S-methyltransferase 1 OS=Danio rerio GN=bhmt
PE=2 SV=1
Length = 400
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 129/335 (38%), Gaps = 56/335 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 23 DGGFVFALEKRGYVKAGP-WTPEAAAEHPEAVRQLHREFLRAGSNVMQTFTFYASDDKLE 81
Query: 86 AKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYG- 144
+G + FTG +I+ +A V + G
Sbjct: 82 NRG------------------------------NKLSFTGQ-QINEAACDLAREVANEGD 110
Query: 145 AYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLE 204
A +A G + Y S E +K+ ++++ + DL+ E + EA+ ++L+
Sbjct: 111 ALVAGGVSQTPSYLSCKSEEEVKKTFKKQLDVFIKKNVDLLIAEYFEHVEEAEWAVQVLK 170
Query: 205 EEGITIPAWFSFNSK-DGINVVSGDSILECASIADSCEQVVAVGINC-----TSPRFIHG 258
G + A D V+ G+ + VG+NC T + +
Sbjct: 171 ATGKPVAATLCIGPDGDMHGVIPGECAVRLVKAGADI-----VGVNCHFDPLTCVKTVAM 225
Query: 259 LILSVRKVTSKP-VIIYPNSGETYNAELKKWV---------ESTGVRDEDFVSYIGKWRD 308
+ +V K K + P + T + + ++ E + + Y +
Sbjct: 226 MKAAVEKAGLKAHYMTQPLAYHTPDCSCQGFIDLPEFPFALEPRILTRWEMQQYAREAYK 285
Query: 309 AGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
AG GGCC P I+A++ LS + LP A+
Sbjct: 286 AGIRYIGGCCGFEPYHIRAVAEELSAERGFLPEAS 320
>sp|Q9H2M3|BHMT2_HUMAN S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Homo
sapiens GN=BHMT2 PE=1 SV=1
Length = 363
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 64/358 (17%)
Query: 3 SGSNGTTSFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHL 62
+G G + + L+ G + DG F LE+ G + LW+ + ++ P VR++H+
Sbjct: 4 AGRPGAKKGILERLES-GEVVIGDGSFLITLEKRGY-VKAGLWTPEAVIEHPDAVRQLHM 61
Query: 63 DYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACE-AREIYYDRCMKDSW 121
++L AG+N++ T ++ A+ E+K A AC+ ARE+
Sbjct: 62 EFLRAGSNVMQTFTFSASEDNMESKWEDVNAA----------ACDLAREV---------- 101
Query: 122 DFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSG 181
G G LVA + Y +Y D +K+ R+++ + A
Sbjct: 102 --AGKGD-----ALVAGGICQTSIY-----KYQKDEA------RIKKLFRQQLEVFAWKN 143
Query: 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK-DGINVVSGDSILECASIADSC 240
D + E + EA E+L+E + + D ++ G+ + S
Sbjct: 144 VDFLIAEYFEHVEEAVWAVEVLKESDRPVAVTMCIGPEGDMHDITPGECAVRLVKAGASI 203
Query: 241 EQVVAVGINC---------TSPRFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW 288
VG+NC T GL + K + +P+ + P+ G+ +L ++
Sbjct: 204 -----VGVNCRFGPDTSLKTMELMKEGLEWAGLKAHLMVQPLGFHAPDCGKEGFVDLPEY 258
Query: 289 ---VESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ES D Y + + G GGCC P I+AI+ L+ + LP A+
Sbjct: 259 PFGLESRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 316
>sp|A8XY95|METH_CAEBR Probable methionine synthase OS=Caenorhabditis briggsae GN=nos-1
PE=3 SV=2
Length = 1273
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 136/344 (39%), Gaps = 51/344 (14%)
Query: 24 VVDGGFATELERHGADLND-----------PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
++DG T ++R + +D PL L+S P ++ K+H YL+AGA+
Sbjct: 20 IIDGAMGTMIQREYMEEHDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGAD 79
Query: 71 IIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACE--AREIYYDRCM--KDSWDFTGS 126
I T ++ T + CE EI Y + + + D G+
Sbjct: 80 FIETNTFSGTTIA-----------------QADYHCEHLVHEINYQSALVARRACDDVGA 122
Query: 127 GRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIA 186
R V ++G L+ V+ + L + + + L G D++
Sbjct: 123 ATGIRR--YVCGAIGPTNRTLSISPSVEKPDFRNVTFQELVKAYGDQARSLIQGGVDVLL 180
Query: 187 FETIPNKLEAKA----YAELLEEEGIT-IPAWFSFNSKDGINVVSGDSILECASIADSCE 241
ET+ + AKA L E+EG+ IP + S D E ++
Sbjct: 181 VETVFDSANAKAALFAIRTLFEDEGVPEIPVFLSGTIVDMSGRTLSGQTGEAFLVSTKQG 240
Query: 242 QVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFV 300
+ +AVG+NC + + + ++ + ++ YPN+G L + E+
Sbjct: 241 KPIAVGLNCALGAKDMRQFVQNMSLWSDTLILCYPNAG------LPNALGGYDETPEEMA 294
Query: 301 SYIGKW-RDAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ ++ +D ++ GGCC TTP+ I A+ + + S +P A+
Sbjct: 295 EVLREFAQDGLVNIIGGCCGTTPDHINAMYKAVQGISPRVPPAD 338
>sp|A6H5Y3|METH_MOUSE Methionine synthase OS=Mus musculus GN=Mtr PE=2 SV=1
Length = 1253
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 63/342 (18%)
Query: 24 VVDGGFATELERH--------GADLND---PLWSAKCLVS--SPHLVRKVHLDYLDAGAN 70
V+DGG T ++R+ G + D PL ++S P ++ ++H +YL AGA+
Sbjct: 19 VLDGGMGTMIQRYKLSEEHFQGQEFKDHSRPLKGNNDILSITQPDIIYQIHKEYLLAGAD 78
Query: 71 IIITASYQATI-----QGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTG 125
II T ++ +T G E + + A + R A EI TG
Sbjct: 79 IIETNTFSSTSIAQADYGLEHLAYRMNKCSADVARKA-----AEEITLQ---------TG 124
Query: 126 SGRISSRPVLVAASVGSYGAYLA-DGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADL 184
R VA ++G L+ S DY + ++ + L + ++ + L + D+
Sbjct: 125 VKR------FVAGALGPTNKTLSVSPSVERPDYRN-ITFDELVDAYQEQAKGLLDGRVDI 177
Query: 185 IAFETIPNKLEAK----AYAELLEE-----EGITIPAWFSFNSKDGINVVSGDSILECAS 235
+ ETI + AK A L EE I I S ++ +G++ + S
Sbjct: 178 LLIETIFDTANAKAALFAIQNLFEENYAPPRPIFISGTIVDKSGRTLSGQTGEAFVTSVS 237
Query: 236 IADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSG--ETYNAELKKWVEST 292
+D + +G+NC+ + I ++ K T+ V+ YPN+G T+ + + +
Sbjct: 238 HSDP----LCIGLNCSLGAAEMRPFIETIGKCTTAYVLCYPNAGLPNTF-GDYDETPSTM 292
Query: 293 GVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSN 334
+DF D ++ GGCC +TP+ I+ I+ +
Sbjct: 293 ATHLKDFAV------DGLVNIVGGCCGSTPDHIREIAEAVKK 328
>sp|O33465|METH_PSEPU Methionine synthase (Fragment) OS=Pseudomonas putida GN=metH PE=3
SV=1
Length = 607
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 133/334 (39%), Gaps = 49/334 (14%)
Query: 24 VVDGGFAT-----ELERH---GADLNDPLWSAKC-------LVSSPHLVRKVHLDYLDAG 68
++DGG T LE H G D W + L+S P ++ + YLDAG
Sbjct: 21 ILDGGMGTMIQSYRLEEHDYRGTRFAD--WPSDVKGNNDLLLLSRPDVIAAIEKAYLDAG 78
Query: 69 ANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGR 128
A+I+ T ++ AT G + + +VE A AR++ + ++
Sbjct: 79 ADILETNTFNATQISQADYGMES----LVYELNVEGARIARQVADAKTLE---------- 124
Query: 129 ISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE 188
+P VA +G + + + V+ + L E + L GADLI E
Sbjct: 125 TPDKPRFVAGVLGPTSRTCSISPDVNDPGYRNVTFDELVENYIEATRGLIEGGADLILIE 184
Query: 189 TIPNKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244
TI + L AK A ++ EE+ + +P S D E + + +
Sbjct: 185 TIFDTLNAKAAIFAVQQVFEEDAVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPI 244
Query: 245 AVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDE---DFV 300
+VG+NC + + + + V +PN+G + G DE +
Sbjct: 245 SVGLNCALGAKDLRPYLEELSTKADTHVSAHPNAG---------LPNAFGEYDETPAEMA 295
Query: 301 SYIGKWRDAG-ASLFGGCCRTTPNTIKAISRVLS 333
+ + ++ +G ++ GGC TTP I+AI+ ++
Sbjct: 296 AVVEEFAASGFLNIIGGCSGTTPGHIQAIAEAVA 329
>sp|Q49775|METH_MYCLE Methionine synthase OS=Mycobacterium leprae (strain TN) GN=metH
PE=3 SV=3
Length = 1206
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 128/339 (37%), Gaps = 56/339 (16%)
Query: 10 SFMTDFLQKCGGYSVV-DGGFATELERHGADLNDPLWSAKCLV----SSPHLVRKVHLDY 64
+ TD L+ +V DG T+L+ L+D C + P ++ +H Y
Sbjct: 10 QYDTDLLETLAQRVMVGDGAMGTQLQDAELTLDDFRGLEGCNEILNETRPDVLETIHRRY 69
Query: 65 LDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFT 124
+AGA+++ T ++ + +IA + R D +
Sbjct: 70 FEAGADLVETNTFGCNLSNLG---------------DYDIADKIR------------DLS 102
Query: 125 GSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRV--------LI 176
G + +R V + + Y+ G G L TL R V L
Sbjct: 103 QRGTVIARRVADELTTPDHKRYVL------GSMGPGTKLPTLGHTEYRVVRDAYTESALG 156
Query: 177 LANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232
+ + GAD + ET + L+ KA + + G IP + + ++ G I
Sbjct: 157 MLDGGADAVLVETCQDLLQLKAAVLGSRRAMTQAGRHIPVFVHVTVETTGTMLLGSEIGA 216
Query: 233 CASIADSCEQVVAVGINC-TSPRFIHGLILSVRKVTSKPVIIYPNSG-ETYNAELKKWVE 290
+ + V +G+NC T P + + + K PV + PN+G A+ ++
Sbjct: 217 ALAAVEPL-GVDMIGLNCATGPAEMSEHLRHLSKHARIPVSVMPNAGLPVLGAKGAEYPL 275
Query: 291 STGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAIS 329
E +I ++ G SL GGCC TTP+ I+ ++
Sbjct: 276 QPDELAEALAGFIAEF---GLSLVGGCCGTTPDHIREVA 311
>sp|Q5RFG2|BHMT1_PONAB Betaine--homocysteine S-methyltransferase 1 OS=Pongo abelii GN=BHMT
PE=2 SV=1
Length = 406
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 56/336 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKG-FSTEEAEALLRRSVEIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G + E+ ++ E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYVLEKISG--QKVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE V L+ L+ F ++ V D + E + EA E L
Sbjct: 126 PSYLSCKSETE---VKKVFLQQLEVFMKKNV--------DFLIAEYFEHVEEAVWAVETL 174
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINC---------TSP 253
G + A + ++ V G+ + S +G+NC T
Sbjct: 175 IASGKPVAATMCIGPEGDLHGVPPGECAVRLVKAGASI-----IGVNCHFDPTISLKTVK 229
Query: 254 RFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
GL + K + S+P+ + P+ + +L ++ +E D Y +
Sbjct: 230 LMKEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAY 289
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ G GGCC P I+AI+ L+ + LP A+
Sbjct: 290 NMGIRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 325
>sp|Q93088|BHMT1_HUMAN Betaine--homocysteine S-methyltransferase 1 OS=Homo sapiens GN=BHMT
PE=1 SV=2
Length = 406
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 135/336 (40%), Gaps = 56/336 (16%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G E + + V E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYV--LEKISGQEVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE V L+ L+ F ++ V D + E + EA E L
Sbjct: 126 PSYLSCKSETE---VKKVFLQQLEVFMKKNV--------DFLIAEYFEHVEEAVWAVETL 174
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINC---------TSP 253
G + A + ++ V G+ + S +G+NC T
Sbjct: 175 IASGKPVAATMCIGPEGDLHGVPPGECAVRLVKAGASI-----IGVNCHFDPTISLKTVK 229
Query: 254 RFIHGLILSVRK--VTSKPVIIY-PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
GL + K + S+P+ + P+ + +L ++ +E D Y +
Sbjct: 230 LMKEGLEAARLKAHLMSQPLAYHTPDCNKQGFIDLPEFPFGLEPRVATRWDIQKYAREAY 289
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ G GGCC P I+AI+ L+ + LP A+
Sbjct: 290 NLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 325
>sp|Q95332|BHMT1_PIG Betaine--homocysteine S-methyltransferase 1 (Fragment) OS=Sus
scrofa GN=BHMT PE=1 SV=3
Length = 278
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 39/228 (17%)
Query: 26 DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFE 85
DGGF LE+ G P W+ + V P VR++H ++L AG+N++ T ++ A+ E
Sbjct: 26 DGGFVFALEKRGYVKAGP-WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLE 84
Query: 86 AKGFSTEEAEALLRRSV-EIACE-AREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
+G AE + + V E AC+ AR++ D D LVA V
Sbjct: 85 NRGNYV--AEKISGQKVNEAACDIARQV------ADEGD-----------ALVAGGVSQT 125
Query: 144 GAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELL 203
+YL+ SE +K+ R+++ + D + E + EA E L
Sbjct: 126 PSYLSCKSETE-----------VKKVFRQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEAL 174
Query: 204 EEEGITIPAWFSFNSKDGIN-VVSGDSILECASIADSCEQVVAVGINC 250
+ G + A + ++ V G + S VG+NC
Sbjct: 175 KASGKPVAATMCIGPEGDLHGVTPGQCAVRLVKAGASI-----VGVNC 217
>sp|Q55786|METH_SYNY3 Methionine synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=metH PE=3 SV=1
Length = 1195
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 118/287 (41%), Gaps = 37/287 (12%)
Query: 52 SSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREI 111
+ P V VH + +AGA+++ T ++ T L+ ++A ++
Sbjct: 52 TKPEAVATVHRAFYEAGADVVETDTFGGT---------------PLVLAEYDLADQS--- 93
Query: 112 YYDRCMKDSWDFTGSGRISS--RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169
YY + S+ +P VA S+G G V ++LK+
Sbjct: 94 YYLNKAAAELAKAVAAEFSTPEKPRFVAGSMGPGTKLPTLGH---------VDYDSLKDA 144
Query: 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLE----EEGITIPAWFSFNSKDGINVV 225
+ +V L + G DL+ ET + L+ KA +E E+G +P S + ++
Sbjct: 145 YVVQVRGLYDGGVDLLLVETCQDVLQIKAALNAIEQVFAEKGDRLPLMVSVTMETMGTML 204
Query: 226 SGDSILECASIADSCEQVVAVGINC-TSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE 284
G + +I + + +G+NC T P + + + + + V PN+G N
Sbjct: 205 VGTEMAAALAILEPYP-IDILGLNCATGPDLMKEHVKYLSEHSPFVVSCIPNAGLPENVG 263
Query: 285 LKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRV 331
+ + T + + +S + D G + GGCC T P+ IKA++ +
Sbjct: 264 GQAFYRLTPMELQ--MSLMHFIEDLGVQVIGGCCGTRPDHIKALADI 308
>sp|O33259|METH_MYCTU Methionine synthase OS=Mycobacterium tuberculosis GN=metH PE=3 SV=1
Length = 1192
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 132/354 (37%), Gaps = 56/354 (15%)
Query: 11 FMTDFLQKCGGYSVV-DGGFATELERHGADLNDPLWSAKCLV----SSPHLVRKVHLDYL 65
+ TD L +V DG T+L+ L+D C + P ++ +H +Y
Sbjct: 9 YDTDLLDVLSQRVMVGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYF 68
Query: 66 DAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTG 125
+AGA+ + T ++ + +IA R D +
Sbjct: 69 EAGADAVETNTFGCNLSNLG---------------DYDIADRIR------------DLSQ 101
Query: 126 SGRISSRPVLVAASVGSYGAYLADGSEYS-GDYGDAVSLETL--------KEFHRRRVLI 176
G +R VA +GS D Y G G L TL ++ + L
Sbjct: 102 KGTAIAR--RVADELGS-----PDRKRYVLGSMGPGTKLPTLGHTEYAVIRDAYTEAALG 154
Query: 177 LANSGADLIAFETIPNKLEAKAYA----ELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232
+ + GAD I ET + L+ KA + G IP + + ++ G I
Sbjct: 155 MLDGGADAILVETCQDLLQLKAAVLGSRRAMTRAGRHIPVFAHVTVETTGTMLLGSEIGA 214
Query: 233 CASIADSCEQVVAVGINC-TSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVES 291
+ + V +G+NC T P + + + + PV + PN+G K E
Sbjct: 215 ALTAVEPL-GVDMIGLNCATGPAEMSEHLRHLSRHARIPVSVMPNAGLPVLG--AKGAEY 271
Query: 292 TGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLSNKSLPSANLNIQ 345
+ DE + G + G SL GGCC TTP I+ ++ ++N P ++ +
Sbjct: 272 PLLPDELAEALAGFIAEFGLSLVGGCCGTTPAHIREVAAAVANIKRPERQVSYE 325
>sp|Q68FT5|BHMT2_RAT S-methylmethionine--homocysteine S-methyltransferase BHMT2
OS=Rattus norvegicus GN=Bhmt2 PE=2 SV=1
Length = 363
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 130/336 (38%), Gaps = 61/336 (18%)
Query: 24 VVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQG 83
V DGGF LE+ G + LW+ + +V P VR++H ++L AGA+++ T ++ A
Sbjct: 24 VGDGGFLFTLEKRGF-VKAGLWTPEAVVEYPSAVRQLHTEFLRAGADVLQTFTFSAAEDR 82
Query: 84 FEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSY 143
E+K + A L + V A LVA +
Sbjct: 83 MESKWEAVNAAACDLAQEVADGGAA--------------------------LVAGGICQT 116
Query: 144 GAYLADGSEYSGDYGDAVSLET-LKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAEL 202
Y +Y D ET +K R ++ + A D + E + EA E+
Sbjct: 117 SLY-----KYHKD-------ETRIKNIFRLQLGVFARKNVDFLIAEYFEHVEEAVWAVEV 164
Query: 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC-----TSPRFIH 257
L E G + + ++ V+ ECA + S +G+NC TS + +
Sbjct: 165 LREVGAPVAVTMCIGPEGDMHGVTPG---ECA-VRLSRAGANIIGVNCRFGPWTSLQTMK 220
Query: 258 GLILSVRKVTSKPVIIY-------PNSGETYNAELKKW---VESTGVRDEDFVSYIGKWR 307
+ +R + ++ P+ G+ +L ++ +E D Y +
Sbjct: 221 LMKEGLRDAGLQAHLMVQCLGFHTPDCGKGGFVDLPEYPFGLEPRVATRWDIQKYAREAY 280
Query: 308 DAGASLFGGCCRTTPNTIKAISRVLSNKS--LPSAN 341
+ G GGCC P I+AI+ L+ + LP A+
Sbjct: 281 NLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPAS 316
>sp|Q91WS4|BHMT2_MOUSE S-methylmethionine--homocysteine S-methyltransferase BHMT2 OS=Mus
musculus GN=Bhmt2 PE=1 SV=2
Length = 363
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 7 GTTSFMTDFLQKCGGYSVV--DGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDY 64
G+T L++ VV D GF LE+ G + LW+ + +V P VR++H ++
Sbjct: 5 GSTRAKKGILERLDSGEVVVGDSGFLFTLEKRGF-VKAGLWTPEAVVEHPSAVRQLHTEF 63
Query: 65 LDAGANIIITASYQAT 80
L AGA+++ T ++ AT
Sbjct: 64 LRAGADVLQTFTFSAT 79
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,165,741
Number of Sequences: 539616
Number of extensions: 5432355
Number of successful extensions: 13800
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 13679
Number of HSP's gapped (non-prelim): 79
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)