Query 019107
Match_columns 346
No_of_seqs 109 out of 1059
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 11:00:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lt8_A Betaine-homocysteine me 100.0 1.1E-70 3.6E-75 540.8 25.0 289 10-335 11-317 (406)
2 1q7z_A 5-methyltetrahydrofolat 100.0 2.3E-69 7.9E-74 552.9 30.7 287 10-339 5-294 (566)
3 1q7z_A 5-methyltetrahydrofolat 95.6 0.53 1.8E-05 47.8 17.9 226 54-334 121-381 (566)
4 3si9_A DHDPS, dihydrodipicolin 95.6 0.22 7.6E-06 46.8 13.9 104 161-277 40-157 (315)
5 2ehh_A DHDPS, dihydrodipicolin 95.4 0.32 1.1E-05 45.0 14.2 104 161-277 18-135 (294)
6 3fkr_A L-2-keto-3-deoxyarabona 95.3 0.92 3.2E-05 42.3 17.3 144 161-332 26-188 (309)
7 2yxg_A DHDPS, dihydrodipicolin 95.2 0.32 1.1E-05 44.9 13.5 104 161-277 18-135 (289)
8 2vc6_A MOSA, dihydrodipicolina 95.1 0.32 1.1E-05 45.0 13.4 104 161-277 18-135 (292)
9 1o5k_A DHDPS, dihydrodipicolin 95.1 0.34 1.2E-05 45.2 13.5 104 161-277 30-147 (306)
10 3na8_A Putative dihydrodipicol 95.0 0.41 1.4E-05 44.9 14.0 104 161-277 42-159 (315)
11 3dz1_A Dihydrodipicolinate syn 95.0 1 3.4E-05 42.1 16.5 146 161-333 26-187 (313)
12 1z41_A YQJM, probable NADH-dep 94.9 0.83 2.8E-05 43.1 15.9 137 163-315 38-247 (338)
13 3qfe_A Putative dihydrodipicol 94.9 0.65 2.2E-05 43.5 15.0 105 161-278 29-149 (318)
14 3m5v_A DHDPS, dihydrodipicolin 94.8 0.53 1.8E-05 43.8 13.9 104 161-277 25-143 (301)
15 3qze_A DHDPS, dihydrodipicolin 94.8 1.4 4.7E-05 41.2 16.8 103 161-276 41-157 (314)
16 2v9d_A YAGE; dihydrodipicolini 94.7 0.41 1.4E-05 45.4 13.0 104 161-277 49-166 (343)
17 1xky_A Dihydrodipicolinate syn 94.5 0.48 1.7E-05 44.1 12.8 104 161-277 30-147 (301)
18 3eb2_A Putative dihydrodipicol 94.5 1.6 5.5E-05 40.4 16.4 105 161-278 22-140 (300)
19 3cpr_A Dihydrodipicolinate syn 94.4 0.45 1.6E-05 44.3 12.6 103 161-276 34-150 (304)
20 2qjg_A Putative aldolase MJ040 94.4 1.1 3.9E-05 40.4 15.1 121 173-314 104-234 (273)
21 3b4u_A Dihydrodipicolinate syn 94.4 1.6 5.6E-05 40.2 16.3 144 161-332 21-185 (294)
22 2ojp_A DHDPS, dihydrodipicolin 94.3 0.52 1.8E-05 43.6 12.7 103 161-276 19-135 (292)
23 3daq_A DHDPS, dihydrodipicolin 94.3 0.45 1.5E-05 44.0 12.1 104 161-277 20-137 (292)
24 1lt8_A Betaine-homocysteine me 94.2 0.88 3E-05 44.2 14.4 155 162-333 52-232 (406)
25 2e6f_A Dihydroorotate dehydrog 94.1 0.45 1.5E-05 44.2 11.7 115 175-314 32-192 (314)
26 3l21_A DHDPS, dihydrodipicolin 94.1 0.45 1.5E-05 44.3 11.7 103 161-276 33-149 (304)
27 3flu_A DHDPS, dihydrodipicolin 94.0 0.64 2.2E-05 43.1 12.6 103 161-276 25-141 (297)
28 1f76_A Dihydroorotate dehydrog 94.0 0.53 1.8E-05 44.2 12.1 122 176-314 73-242 (336)
29 3e96_A Dihydrodipicolinate syn 93.9 0.48 1.7E-05 44.4 11.7 102 161-276 30-145 (316)
30 2r8w_A AGR_C_1641P; APC7498, d 93.9 0.54 1.8E-05 44.4 12.1 103 161-276 52-168 (332)
31 3d0c_A Dihydrodipicolinate syn 93.9 0.69 2.3E-05 43.3 12.5 105 161-279 30-148 (314)
32 2rfg_A Dihydrodipicolinate syn 93.8 0.59 2E-05 43.4 11.8 103 161-276 18-134 (297)
33 3a5f_A Dihydrodipicolinate syn 93.7 0.5 1.7E-05 43.7 11.2 104 161-277 19-136 (291)
34 3tak_A DHDPS, dihydrodipicolin 93.5 0.63 2.2E-05 43.0 11.6 103 161-276 19-135 (291)
35 3nav_A Tryptophan synthase alp 93.5 4.4 0.00015 37.0 17.1 89 174-273 118-213 (271)
36 1f6k_A N-acetylneuraminate lya 93.4 0.7 2.4E-05 42.7 11.7 104 161-277 21-139 (293)
37 3s5o_A 4-hydroxy-2-oxoglutarat 93.4 0.69 2.4E-05 43.1 11.7 103 161-276 32-150 (307)
38 3i4e_A Isocitrate lyase; struc 93.3 2.8 9.6E-05 41.0 16.1 134 172-315 171-350 (439)
39 2wkj_A N-acetylneuraminate lya 93.3 0.75 2.6E-05 42.8 11.7 103 161-276 29-146 (303)
40 1jub_A Dihydroorotate dehydrog 93.2 0.63 2.2E-05 43.1 11.1 81 209-314 93-189 (311)
41 3lg3_A Isocitrate lyase; conse 93.1 2.1 7.1E-05 41.8 14.8 134 172-315 171-350 (435)
42 3noy_A 4-hydroxy-3-methylbut-2 93.1 0.9 3.1E-05 43.3 11.8 144 161-327 43-195 (366)
43 3lye_A Oxaloacetate acetyl hyd 93.1 1.2 4.1E-05 41.6 12.6 83 172-266 182-268 (307)
44 3h5d_A DHDPS, dihydrodipicolin 93.0 2 6.9E-05 40.0 14.2 143 161-331 25-182 (311)
45 3eol_A Isocitrate lyase; seatt 92.9 2.9 9.8E-05 40.9 15.4 134 172-315 164-345 (433)
46 2nuw_A 2-keto-3-deoxygluconate 92.6 1.7 5.9E-05 39.9 13.0 102 161-277 17-132 (288)
47 3gr7_A NADPH dehydrogenase; fl 92.3 4.7 0.00016 37.9 15.9 134 164-314 39-246 (340)
48 2r91_A 2-keto-3-deoxy-(6-phosp 92.2 2.6 8.9E-05 38.6 13.8 102 161-277 16-131 (286)
49 1o66_A 3-methyl-2-oxobutanoate 91.9 4.4 0.00015 37.1 14.6 100 162-274 93-202 (275)
50 1to3_A Putative aldolase YIHT; 91.8 3.7 0.00013 38.1 14.3 117 176-313 116-250 (304)
51 1w3i_A EDA, 2-keto-3-deoxy glu 91.5 3.3 0.00011 38.1 13.7 101 161-276 17-131 (293)
52 1ydo_A HMG-COA lyase; TIM-barr 91.1 2.6 8.8E-05 39.2 12.5 131 63-239 89-225 (307)
53 2hmc_A AGR_L_411P, dihydrodipi 91.1 2 6.7E-05 40.8 11.8 101 161-276 44-159 (344)
54 1m3u_A 3-methyl-2-oxobutanoate 91.0 6.5 0.00022 35.8 14.7 90 176-274 102-202 (264)
55 3hgj_A Chromate reductase; TIM 90.8 11 0.00037 35.5 17.8 136 164-315 37-257 (349)
56 3vnd_A TSA, tryptophan synthas 90.8 5.2 0.00018 36.4 13.9 90 173-273 115-211 (267)
57 4h3d_A 3-dehydroquinate dehydr 90.6 3.8 0.00013 37.1 12.8 149 162-328 30-188 (258)
58 3b0p_A TRNA-dihydrouridine syn 90.2 1.6 5.6E-05 41.3 10.4 112 180-313 27-160 (350)
59 1w1z_A Delta-aminolevulinic ac 89.8 13 0.00043 34.7 16.0 225 54-314 63-315 (328)
60 3oix_A Putative dihydroorotate 89.8 6.7 0.00023 37.1 14.3 81 208-313 127-223 (345)
61 4dpp_A DHDPS 2, dihydrodipicol 89.7 3.4 0.00012 39.4 12.1 101 161-276 77-191 (360)
62 1h7n_A 5-aminolaevulinic acid 89.7 13 0.00046 34.8 19.1 225 54-315 68-327 (342)
63 2ftp_A Hydroxymethylglutaryl-C 89.6 7.9 0.00027 35.6 14.5 140 52-239 84-227 (302)
64 1l6s_A Porphobilinogen synthas 89.1 14 0.00049 34.3 16.4 224 55-314 58-308 (323)
65 2nx9_A Oxaloacetate decarboxyl 88.9 9.6 0.00033 37.5 15.1 96 173-275 105-208 (464)
66 1ydn_A Hydroxymethylglutaryl-C 88.8 6.2 0.00021 36.1 13.0 98 174-278 85-211 (295)
67 3vav_A 3-methyl-2-oxobutanoate 88.7 12 0.00041 34.3 14.6 99 162-273 104-213 (275)
68 3fa4_A 2,3-dimethylmalate lyas 88.3 4.9 0.00017 37.4 11.8 83 172-266 174-260 (302)
69 2cw6_A Hydroxymethylglutaryl-C 88.2 12 0.00042 34.2 14.6 68 162-239 154-224 (298)
70 4ef8_A Dihydroorotate dehydrog 88.2 2.7 9.3E-05 40.0 10.3 78 209-310 126-220 (354)
71 1ps9_A 2,4-dienoyl-COA reducta 88.1 6.4 0.00022 40.2 13.9 136 163-315 36-246 (671)
72 3rmj_A 2-isopropylmalate synth 87.9 6.4 0.00022 37.6 12.7 55 168-222 157-215 (370)
73 3ble_A Citramalate synthase fr 87.8 10 0.00036 35.5 14.0 65 168-238 169-236 (337)
74 1f8m_A Isocitrate lyase, ICL; 87.6 18 0.00062 35.2 15.7 135 172-314 167-345 (429)
75 1vhn_A Putative flavin oxidore 87.3 1.6 5.6E-05 40.6 8.1 91 179-278 26-136 (318)
76 3o1n_A 3-dehydroquinate dehydr 87.2 3.6 0.00012 37.7 10.2 102 170-276 121-229 (276)
77 1zco_A 2-dehydro-3-deoxyphosph 86.9 11 0.00037 34.2 13.1 28 51-78 33-60 (262)
78 3igs_A N-acetylmannosamine-6-p 86.9 1.7 5.7E-05 38.8 7.5 86 172-273 92-186 (232)
79 1zlp_A PSR132, petal death pro 86.5 0.64 2.2E-05 43.7 4.7 44 169-217 190-233 (318)
80 1rqb_A Transcarboxylase 5S sub 86.3 12 0.00041 37.6 14.1 96 173-275 122-227 (539)
81 1xg4_A Probable methylisocitra 86.0 0.68 2.3E-05 43.1 4.6 83 170-265 169-255 (295)
82 1ydn_A Hydroxymethylglutaryl-C 86.0 14 0.00048 33.6 13.6 134 62-239 86-223 (295)
83 1vzw_A Phosphoribosyl isomeras 86.0 3.4 0.00012 36.4 9.1 95 173-273 89-195 (244)
84 3q58_A N-acetylmannosamine-6-p 85.8 1.9 6.5E-05 38.4 7.3 86 172-273 92-186 (229)
85 1jub_A Dihydroorotate dehydrog 85.8 15 0.00052 33.5 13.9 138 169-333 107-290 (311)
86 1vyr_A Pentaerythritol tetrani 85.8 24 0.00082 33.3 15.5 80 230-315 163-269 (364)
87 1pv8_A Delta-aminolevulinic ac 85.1 25 0.00084 32.8 14.5 228 54-315 58-316 (330)
88 3eoo_A Methylisocitrate lyase; 85.1 0.81 2.8E-05 42.6 4.6 43 170-217 173-215 (298)
89 2ze3_A DFA0005; organic waste 85.0 11 0.00038 34.4 12.2 101 162-274 90-210 (275)
90 1sfl_A 3-dehydroquinate dehydr 84.9 9 0.00031 34.1 11.4 103 170-277 85-195 (238)
91 3i4e_A Isocitrate lyase; struc 84.7 13 0.00046 36.2 13.1 39 162-205 269-308 (439)
92 3hgj_A Chromate reductase; TIM 83.9 13 0.00044 34.9 12.6 152 160-334 141-337 (349)
93 1s2w_A Phosphoenolpyruvate pho 83.8 1.2 4.1E-05 41.4 5.1 41 172-215 174-215 (295)
94 3ih1_A Methylisocitrate lyase; 83.6 0.66 2.3E-05 43.4 3.3 42 171-217 178-219 (305)
95 4g9p_A 4-hydroxy-3-methylbut-2 83.5 4 0.00014 39.4 8.7 81 171-252 41-148 (406)
96 3obk_A Delta-aminolevulinic ac 83.3 30 0.001 32.5 17.6 229 54-315 72-330 (356)
97 4h3d_A 3-dehydroquinate dehydr 83.2 9.8 0.00033 34.3 11.0 98 174-276 105-209 (258)
98 2vc6_A MOSA, dihydrodipicolina 82.9 28 0.00095 31.7 21.6 152 53-261 19-175 (292)
99 2yw3_A 4-hydroxy-2-oxoglutarat 82.9 20 0.00068 31.0 12.5 120 172-334 74-199 (207)
100 4fxs_A Inosine-5'-monophosphat 82.8 14 0.00048 36.5 12.8 64 174-250 286-364 (496)
101 1icp_A OPR1, 12-oxophytodienoa 82.7 14 0.00049 35.1 12.5 78 230-314 169-273 (376)
102 3r89_A Orotidine 5'-phosphate 82.6 6.5 0.00022 36.3 9.6 159 162-333 41-218 (290)
103 3f4w_A Putative hexulose 6 pho 82.5 13 0.00045 31.6 11.2 89 174-273 70-164 (211)
104 2qf7_A Pyruvate carboxylase pr 82.3 17 0.00058 39.9 14.3 99 173-276 650-760 (1165)
105 4fo4_A Inosine 5'-monophosphat 81.7 15 0.0005 35.0 12.0 66 171-248 110-176 (366)
106 2nx9_A Oxaloacetate decarboxyl 81.5 32 0.0011 33.8 14.7 64 168-238 158-224 (464)
107 3eol_A Isocitrate lyase; seatt 81.3 41 0.0014 32.7 15.5 39 162-205 264-303 (433)
108 2hsa_B 12-oxophytodienoate red 81.3 20 0.00067 34.5 12.9 74 230-310 173-273 (402)
109 2hjp_A Phosphonopyruvate hydro 81.3 1.2 4.1E-05 41.3 4.1 42 172-216 170-212 (290)
110 2ze3_A DFA0005; organic waste 80.8 2.4 8.3E-05 38.9 6.0 39 170-213 170-208 (275)
111 2yr1_A 3-dehydroquinate dehydr 80.6 9.5 0.00032 34.4 9.8 106 162-277 98-209 (257)
112 3usb_A Inosine-5'-monophosphat 80.2 17 0.00059 36.0 12.5 64 174-250 311-389 (511)
113 3zwt_A Dihydroorotate dehydrog 80.1 10 0.00035 36.1 10.3 85 209-314 146-251 (367)
114 3iv3_A Tagatose 1,6-diphosphat 79.6 41 0.0014 31.5 14.9 126 175-319 117-280 (332)
115 3si9_A DHDPS, dihydrodipicolin 79.4 39 0.0013 31.2 22.0 153 53-262 41-198 (315)
116 2ekc_A AQ_1548, tryptophan syn 79.4 34 0.0012 30.5 16.0 90 173-273 114-211 (262)
117 1f8m_A Isocitrate lyase, ICL; 79.0 15 0.00052 35.7 11.2 39 162-205 265-304 (429)
118 3f4w_A Putative hexulose 6 pho 78.6 30 0.001 29.4 14.0 95 162-272 11-107 (211)
119 3qja_A IGPS, indole-3-glycerol 78.3 17 0.00057 33.1 10.8 62 173-250 127-190 (272)
120 1tx2_A DHPS, dihydropteroate s 78.2 36 0.0012 31.4 13.1 145 133-312 39-197 (297)
121 3ewb_X 2-isopropylmalate synth 78.1 41 0.0014 30.7 15.4 68 168-239 150-221 (293)
122 1f76_A Dihydroorotate dehydrog 78.0 27 0.00094 32.2 12.5 80 164-250 149-246 (336)
123 3m47_A Orotidine 5'-phosphate 77.4 18 0.00061 31.8 10.5 30 50-79 73-102 (228)
124 4fo4_A Inosine 5'-monophosphat 77.0 39 0.0013 32.0 13.4 63 174-249 163-240 (366)
125 3b8i_A PA4872 oxaloacetate dec 76.9 1.6 5.6E-05 40.3 3.5 37 172-213 172-208 (287)
126 3na8_A Putative dihydrodipicol 76.7 47 0.0016 30.6 21.4 151 53-262 43-200 (315)
127 3k30_A Histamine dehydrogenase 76.6 33 0.0011 35.1 13.7 109 162-278 42-234 (690)
128 2qiw_A PEP phosphonomutase; st 76.5 25 0.00084 31.7 11.3 97 172-274 97-210 (255)
129 2ehh_A DHDPS, dihydrodipicolin 75.9 46 0.0016 30.2 21.3 153 53-262 19-176 (294)
130 1s2w_A Phosphoenolpyruvate pho 75.8 49 0.0017 30.4 19.1 100 173-277 99-218 (295)
131 2pcq_A Putative dihydrodipicol 75.7 8.6 0.00029 35.1 8.1 97 161-276 16-126 (283)
132 3flu_A DHDPS, dihydrodipicolin 75.4 49 0.0017 30.2 20.7 151 53-261 26-181 (297)
133 2rfg_A Dihydrodipicolinate syn 75.2 49 0.0017 30.1 19.3 149 53-259 19-172 (297)
134 3a5f_A Dihydrodipicolinate syn 74.9 49 0.0017 30.0 18.8 153 53-263 20-177 (291)
135 3eeg_A 2-isopropylmalate synth 74.8 6.7 0.00023 36.7 7.2 67 168-238 151-221 (325)
136 1rqb_A Transcarboxylase 5S sub 74.8 65 0.0022 32.2 14.8 65 168-237 175-242 (539)
137 3dxi_A Putative aldolase; TIM 74.6 23 0.00079 33.0 10.9 91 179-275 98-193 (320)
138 1thf_D HISF protein; thermophI 74.5 9.7 0.00033 33.5 8.0 96 173-273 88-200 (253)
139 3nvt_A 3-deoxy-D-arabino-heptu 74.5 61 0.0021 30.9 15.3 43 172-216 160-213 (385)
140 2ojp_A DHDPS, dihydrodipicolin 74.2 51 0.0018 29.9 18.4 140 53-252 20-164 (292)
141 1xg4_A Probable methylisocitra 74.0 50 0.0017 30.3 12.9 104 162-277 92-212 (295)
142 1o94_A Tmadh, trimethylamine d 73.9 20 0.00068 37.0 11.3 106 164-277 39-225 (729)
143 4avf_A Inosine-5'-monophosphat 73.5 39 0.0013 33.3 12.8 64 174-250 284-362 (490)
144 3fgn_A Dethiobiotin synthetase 73.4 15 0.0005 33.0 8.9 119 161-308 111-242 (251)
145 3kru_A NADH:flavin oxidoreduct 73.0 62 0.0021 30.3 13.7 111 160-273 132-282 (343)
146 3o1n_A 3-dehydroquinate dehydr 72.4 56 0.0019 29.6 13.8 151 162-331 50-211 (276)
147 2hjp_A Phosphonopyruvate hydro 72.4 58 0.002 29.8 12.8 98 173-275 95-212 (290)
148 1nvm_A HOA, 4-hydroxy-2-oxoval 72.3 33 0.0011 32.1 11.5 93 174-275 99-201 (345)
149 2v82_A 2-dehydro-3-deoxy-6-pho 72.3 44 0.0015 28.3 13.3 79 173-272 72-152 (212)
150 1w5q_A Delta-aminolevulinic ac 72.2 64 0.0022 30.1 17.9 227 54-315 65-322 (337)
151 3hbl_A Pyruvate carboxylase; T 72.2 65 0.0022 35.3 15.2 98 174-275 633-742 (1150)
152 3glc_A Aldolase LSRF; TIM barr 72.1 34 0.0012 31.5 11.2 111 177-312 134-252 (295)
153 2uwf_A Endoxylanase, alkaline 71.9 25 0.00087 33.1 10.6 50 168-219 202-259 (356)
154 3qze_A DHDPS, dihydrodipicolin 71.7 62 0.0021 29.8 18.4 152 53-262 42-198 (314)
155 1tv5_A Dhodehase, dihydroorota 71.4 47 0.0016 32.3 12.6 99 209-333 296-421 (443)
156 3qfe_A Putative dihydrodipicol 71.3 64 0.0022 29.7 21.7 154 53-262 30-190 (318)
157 1p0k_A Isopentenyl-diphosphate 71.2 60 0.002 30.1 13.0 95 170-274 75-184 (349)
158 2ftp_A Hydroxymethylglutaryl-C 70.9 62 0.0021 29.4 16.5 98 174-278 89-215 (302)
159 2yxg_A DHDPS, dihydrodipicolin 70.7 61 0.0021 29.3 20.8 152 53-261 19-175 (289)
160 1vs1_A 3-deoxy-7-phosphoheptul 70.6 31 0.0011 31.4 10.6 28 51-78 48-75 (276)
161 2e6f_A Dihydroorotate dehydrog 70.6 26 0.00088 32.0 10.2 136 170-332 108-291 (314)
162 2yr1_A 3-dehydroquinate dehydr 70.4 60 0.002 29.0 13.5 100 162-265 30-137 (257)
163 4e38_A Keto-hydroxyglutarate-a 70.3 32 0.0011 30.6 10.2 101 172-313 97-198 (232)
164 3oix_A Putative dihydroorotate 69.9 60 0.0021 30.4 12.7 133 170-333 143-323 (345)
165 1geq_A Tryptophan synthase alp 69.7 25 0.00087 30.7 9.6 90 171-273 98-196 (248)
166 3ffs_A Inosine-5-monophosphate 69.7 21 0.00072 34.4 9.6 65 172-249 147-212 (400)
167 3nav_A Tryptophan synthase alp 69.7 57 0.002 29.5 12.1 99 224-331 61-172 (271)
168 3ovp_A Ribulose-phosphate 3-ep 69.4 35 0.0012 29.9 10.4 49 172-220 21-75 (228)
169 4gj1_A 1-(5-phosphoribosyl)-5- 69.2 35 0.0012 30.2 10.4 99 173-274 89-202 (243)
170 1oy0_A Ketopantoate hydroxymet 69.0 69 0.0024 29.2 14.3 101 162-274 110-220 (281)
171 3gr7_A NADPH dehydrogenase; fl 69.0 43 0.0015 31.3 11.4 151 160-334 133-326 (340)
172 1qo2_A Molecule: N-((5-phospho 68.5 19 0.00065 31.5 8.4 95 174-273 88-193 (241)
173 3bg3_A Pyruvate carboxylase, m 68.3 1.1E+02 0.0039 31.6 15.3 65 168-238 261-328 (718)
174 1z41_A YQJM, probable NADH-dep 68.3 75 0.0026 29.4 18.2 151 160-334 133-326 (338)
175 1h5y_A HISF; histidine biosynt 67.9 11 0.00036 32.8 6.6 97 174-273 92-203 (253)
176 1ep3_A Dihydroorotate dehydrog 67.6 51 0.0018 29.6 11.5 61 209-275 98-171 (311)
177 1ep3_A Dihydroorotate dehydrog 67.6 70 0.0024 28.7 14.8 70 170-248 113-195 (311)
178 3tak_A DHDPS, dihydrodipicolin 67.5 72 0.0025 28.8 20.4 152 53-262 20-176 (291)
179 2r91_A 2-keto-3-deoxy-(6-phosp 67.4 72 0.0024 28.8 14.0 145 53-261 17-167 (286)
180 1ps9_A 2,4-dienoyl-COA reducta 67.3 53 0.0018 33.3 12.6 111 160-273 130-285 (671)
181 2eja_A URO-D, UPD, uroporphyri 67.2 77 0.0026 29.1 16.2 135 169-335 180-335 (338)
182 3eoo_A Methylisocitrate lyase; 66.9 63 0.0022 29.7 11.9 97 173-277 103-216 (298)
183 2y88_A Phosphoribosyl isomeras 66.9 13 0.00044 32.5 7.0 94 173-273 88-198 (244)
184 1eep_A Inosine 5'-monophosphat 66.6 42 0.0014 31.9 11.1 65 172-248 156-221 (404)
185 1vzw_A Phosphoribosyl isomeras 66.2 65 0.0022 27.9 11.9 90 173-278 37-134 (244)
186 3vav_A 3-methyl-2-oxobutanoate 66.1 5.5 0.00019 36.5 4.3 47 162-216 168-214 (275)
187 4ay7_A Methylcobalamin\: coenz 66.0 83 0.0028 29.0 15.2 84 174-266 255-346 (348)
188 3kru_A NADH:flavin oxidoreduct 66.0 86 0.003 29.2 15.1 48 164-217 37-102 (343)
189 3l5l_A Xenobiotic reductase A; 65.9 31 0.0011 32.4 9.9 151 160-333 147-343 (363)
190 2cw6_A Hydroxymethylglutaryl-C 65.6 30 0.001 31.6 9.4 98 174-275 86-207 (298)
191 1w3i_A EDA, 2-keto-3-deoxy glu 65.5 79 0.0027 28.6 12.9 145 53-261 18-168 (293)
192 3vni_A Xylose isomerase domain 65.1 56 0.0019 28.7 11.1 106 163-277 127-248 (294)
193 1u1j_A 5-methyltetrahydroptero 65.1 53 0.0018 34.3 12.2 136 162-321 180-331 (765)
194 1y0e_A Putative N-acetylmannos 65.0 41 0.0014 28.7 9.8 88 173-273 80-180 (223)
195 1xky_A Dihydrodipicolinate syn 64.7 84 0.0029 28.6 18.3 152 53-262 31-187 (301)
196 2dep_A Xylanase B, thermostabl 64.4 45 0.0015 31.3 10.6 49 168-218 201-257 (356)
197 2qiw_A PEP phosphonomutase; st 64.3 4.8 0.00016 36.4 3.6 37 172-213 172-208 (255)
198 2nuw_A 2-keto-3-deoxygluconate 64.0 84 0.0029 28.4 12.6 105 53-214 18-128 (288)
199 1tqj_A Ribulose-phosphate 3-ep 63.7 26 0.00089 30.7 8.3 48 172-220 21-73 (230)
200 1qpo_A Quinolinate acid phosph 63.1 20 0.00069 32.8 7.6 65 173-250 206-270 (284)
201 3lg3_A Isocitrate lyase; conse 62.6 27 0.00091 34.0 8.6 39 162-205 269-308 (435)
202 3bo9_A Putative nitroalkan dio 62.4 57 0.0019 30.1 10.8 84 171-273 92-181 (326)
203 3zwt_A Dihydroorotate dehydrog 62.4 1E+02 0.0035 29.0 12.8 139 168-333 164-346 (367)
204 4avf_A Inosine-5'-monophosphat 62.3 64 0.0022 31.7 11.7 66 171-248 231-297 (490)
205 1ka9_F Imidazole glycerol phos 62.1 16 0.00055 32.0 6.7 96 173-273 89-201 (252)
206 3rpd_A Methionine synthase (B1 62.1 39 0.0013 31.9 9.7 143 163-321 166-328 (357)
207 3ivs_A Homocitrate synthase, m 62.0 1.2E+02 0.004 29.4 13.3 62 170-238 182-246 (423)
208 2ztj_A Homocitrate synthase; ( 61.9 1.1E+02 0.0037 28.9 16.2 66 168-239 145-213 (382)
209 2nu8_B SCS-beta, succinyl-COA 61.6 72 0.0025 30.3 11.6 67 161-239 293-363 (388)
210 1w8s_A FBP aldolase, fructose- 61.4 65 0.0022 28.8 10.7 123 174-320 98-232 (263)
211 1sfl_A 3-dehydroquinate dehydr 61.4 85 0.0029 27.6 12.4 90 173-265 22-123 (238)
212 1gte_A Dihydropyrimidine dehyd 61.3 30 0.001 37.2 9.8 67 203-275 628-710 (1025)
213 1aj0_A DHPS, dihydropteroate s 61.0 97 0.0033 28.1 16.5 169 133-334 14-206 (282)
214 1mxs_A KDPG aldolase; 2-keto-3 61.0 81 0.0028 27.5 11.0 109 172-323 89-201 (225)
215 1vrd_A Inosine-5'-monophosphat 60.7 75 0.0026 30.9 11.9 68 171-250 239-307 (494)
216 2y88_A Phosphoribosyl isomeras 60.4 36 0.0012 29.5 8.6 79 172-264 35-121 (244)
217 1o4u_A Type II quinolic acid p 60.4 16 0.00054 33.6 6.4 61 177-250 209-269 (285)
218 4fxs_A Inosine-5'-monophosphat 60.3 54 0.0019 32.3 10.8 65 172-248 234-299 (496)
219 3eb2_A Putative dihydrodipicol 60.1 1E+02 0.0035 28.0 19.1 151 53-263 23-180 (300)
220 3bg3_A Pyruvate carboxylase, m 60.1 1.2E+02 0.0041 31.4 13.6 99 173-275 202-312 (718)
221 2ztj_A Homocitrate synthase; ( 60.0 1.2E+02 0.004 28.7 13.8 94 174-275 80-196 (382)
222 3daq_A DHDPS, dihydrodipicolin 59.8 1E+02 0.0034 27.9 19.7 149 53-259 21-174 (292)
223 2gou_A Oxidoreductase, FMN-bin 59.8 86 0.003 29.4 11.7 148 160-330 150-337 (365)
224 3tdn_A FLR symmetric alpha-bet 59.7 3.4 0.00012 36.6 1.7 97 174-273 94-205 (247)
225 3k30_A Histamine dehydrogenase 59.6 83 0.0028 32.0 12.4 112 160-273 145-299 (690)
226 3r2g_A Inosine 5'-monophosphat 59.5 71 0.0024 30.2 11.0 66 170-248 101-168 (361)
227 2r14_A Morphinone reductase; H 59.2 43 0.0015 31.7 9.5 22 256-277 219-241 (377)
228 1zco_A 2-dehydro-3-deoxyphosph 59.2 1E+02 0.0034 27.6 12.0 44 171-216 40-94 (262)
229 1zlp_A PSR132, petal death pro 59.0 1.1E+02 0.0039 28.3 13.5 97 173-277 121-234 (318)
230 3inp_A D-ribulose-phosphate 3- 58.8 25 0.00085 31.5 7.3 49 172-220 44-97 (246)
231 3khj_A Inosine-5-monophosphate 58.6 1.2E+02 0.004 28.6 12.4 65 171-248 107-172 (361)
232 2wkj_A N-acetylneuraminate lya 58.4 1.1E+02 0.0037 27.9 17.2 152 53-261 30-186 (303)
233 1f6k_A N-acetylneuraminate lya 57.5 1.1E+02 0.0038 27.6 16.8 151 53-261 22-178 (293)
234 3b8i_A PA4872 oxaloacetate dec 57.5 1.1E+02 0.0039 27.8 13.2 94 173-275 102-211 (287)
235 3emz_A Xylanase, endo-1,4-beta 57.2 56 0.0019 30.4 9.8 48 168-217 187-241 (331)
236 1to3_A Putative aldolase YIHT; 57.1 1.2E+02 0.004 27.8 12.1 43 168-211 177-223 (304)
237 2gjl_A Hypothetical protein PA 57.0 1.1E+02 0.0039 27.8 11.9 84 171-273 86-177 (328)
238 2w6r_A Imidazole glycerol phos 56.9 36 0.0012 29.9 8.2 139 174-333 89-247 (266)
239 2p10_A MLL9387 protein; putati 56.4 57 0.0019 29.9 9.3 72 172-251 174-261 (286)
240 4ay7_A Methylcobalamin\: coenz 56.3 1.2E+02 0.0042 27.8 13.9 41 295-335 302-346 (348)
241 1tv5_A Dhodehase, dihydroorota 56.2 46 0.0016 32.4 9.2 20 295-314 309-328 (443)
242 3paj_A Nicotinate-nucleotide p 56.0 42 0.0014 31.3 8.6 58 177-250 247-304 (320)
243 3s5o_A 4-hydroxy-2-oxoglutarat 55.9 1.2E+02 0.0041 27.6 18.8 151 53-261 33-190 (307)
244 1tqx_A D-ribulose-5-phosphate 55.7 80 0.0027 27.6 10.1 88 173-260 23-134 (227)
245 3ist_A Glutamate racemase; str 55.7 40 0.0014 30.4 8.3 35 156-191 43-79 (269)
246 2inf_A URO-D, UPD, uroporphyri 55.3 1.3E+02 0.0045 27.8 14.8 139 166-335 191-349 (359)
247 1rvg_A Fructose-1,6-bisphospha 55.2 1E+02 0.0035 28.5 10.9 164 50-277 23-211 (305)
248 3bw2_A 2-nitropropane dioxygen 55.1 79 0.0027 29.5 10.6 86 170-273 111-213 (369)
249 1jcn_A Inosine monophosphate d 55.0 1.4E+02 0.0047 29.2 12.7 90 171-273 257-363 (514)
250 4ab4_A Xenobiotic reductase B; 54.3 48 0.0017 31.3 8.9 71 255-333 205-279 (362)
251 3khj_A Inosine-5-monophosphate 54.1 1.1E+02 0.0038 28.7 11.4 86 174-273 62-150 (361)
252 3ctl_A D-allulose-6-phosphate 54.1 84 0.0029 27.5 9.9 47 172-220 17-68 (231)
253 2z6i_A Trans-2-enoyl-ACP reduc 54.0 71 0.0024 29.4 9.9 85 170-273 77-167 (332)
254 3of5_A Dethiobiotin synthetase 53.9 26 0.0009 30.6 6.6 102 161-275 94-206 (228)
255 2gou_A Oxidoreductase, FMN-bin 53.8 99 0.0034 29.0 11.0 20 232-252 165-184 (365)
256 1vhc_A Putative KHG/KDPG aldol 53.8 1.1E+02 0.0038 26.6 12.7 83 172-278 80-165 (224)
257 2b7n_A Probable nicotinate-nuc 53.8 32 0.0011 31.2 7.2 58 179-249 200-257 (273)
258 3b4u_A Dihydrodipicolinate syn 53.8 1.3E+02 0.0044 27.2 16.9 154 53-262 22-184 (294)
259 3fk8_A Disulphide isomerase; A 53.7 24 0.00081 27.1 5.7 112 188-306 10-131 (133)
260 3tsm_A IGPS, indole-3-glycerol 53.3 64 0.0022 29.2 9.2 64 173-251 134-198 (272)
261 3l0g_A Nicotinate-nucleotide p 53.1 28 0.00095 32.2 6.7 58 177-250 223-280 (300)
262 1mzh_A Deoxyribose-phosphate a 53.0 91 0.0031 27.0 10.0 80 241-333 82-173 (225)
263 1qop_A Tryptophan synthase alp 52.3 86 0.0029 27.9 9.9 91 171-266 34-146 (268)
264 1ujp_A Tryptophan synthase alp 52.1 40 0.0014 30.4 7.6 90 173-273 111-207 (271)
265 1m3u_A 3-methyl-2-oxobutanoate 52.1 17 0.00059 33.0 5.1 40 168-213 161-200 (264)
266 1u83_A Phosphosulfolactate syn 52.1 66 0.0023 29.3 8.9 129 161-314 50-189 (276)
267 2jbm_A Nicotinate-nucleotide p 51.9 37 0.0013 31.2 7.4 59 178-249 214-272 (299)
268 3cyv_A URO-D, UPD, uroporphyri 51.9 1.4E+02 0.005 27.3 12.7 41 295-335 300-348 (354)
269 4af0_A Inosine-5'-monophosphat 51.8 1.4E+02 0.0048 29.9 12.0 65 173-250 335-414 (556)
270 1ydo_A HMG-COA lyase; TIM-barr 51.7 1.1E+02 0.0039 27.9 10.8 95 174-275 87-208 (307)
271 1us2_A Xylanase10C, endo-beta- 51.5 73 0.0025 31.8 10.0 50 168-219 360-417 (530)
272 2v9d_A YAGE; dihydrodipicolini 51.4 1.5E+02 0.0052 27.5 21.7 154 53-263 50-208 (343)
273 3txv_A Probable tagatose 6-pho 51.4 69 0.0023 31.3 9.5 86 230-321 8-98 (450)
274 3h5d_A DHDPS, dihydrodipicolin 51.2 1.5E+02 0.005 27.1 17.9 140 53-252 26-171 (311)
275 3tml_A 2-dehydro-3-deoxyphosph 51.1 1.5E+02 0.005 27.1 12.6 157 51-275 27-203 (288)
276 2egz_A 3-dehydroquinate dehydr 51.1 1.2E+02 0.0042 26.2 10.5 98 170-276 73-172 (219)
277 2qgh_A Diaminopimelate decarbo 51.0 56 0.0019 31.1 8.9 72 177-251 120-205 (425)
278 3ih1_A Methylisocitrate lyase; 50.9 1.5E+02 0.0052 27.2 13.3 94 173-276 109-219 (305)
279 3gka_A N-ethylmaleimide reduct 50.6 79 0.0027 29.8 9.7 71 255-333 213-287 (361)
280 1v0l_A Endo-1,4-beta-xylanase 50.3 44 0.0015 30.8 7.7 49 169-219 184-240 (313)
281 3tqv_A Nicotinate-nucleotide p 50.2 33 0.0011 31.5 6.7 59 176-250 213-271 (287)
282 2agk_A 1-(5-phosphoribosyl)-5- 50.0 20 0.00069 32.2 5.2 73 174-264 44-126 (260)
283 3lye_A Oxaloacetate acetyl hyd 49.8 1.6E+02 0.0054 27.1 15.1 92 173-273 108-220 (307)
284 1o66_A 3-methyl-2-oxobutanoate 49.8 15 0.00051 33.6 4.3 40 168-213 161-200 (275)
285 3l21_A DHDPS, dihydrodipicolin 49.6 1.5E+02 0.0052 26.9 17.0 150 53-260 34-188 (304)
286 2z6i_A Trans-2-enoyl-ACP reduc 49.1 1.5E+02 0.0052 27.0 11.4 86 175-274 30-116 (332)
287 1wa3_A 2-keto-3-deoxy-6-phosph 49.0 1.1E+02 0.0036 25.6 9.6 78 174-272 76-154 (205)
288 2gjl_A Hypothetical protein PA 48.9 1.6E+02 0.0053 26.8 11.9 93 174-275 32-125 (328)
289 3nvt_A 3-deoxy-D-arabino-heptu 48.6 1.3E+02 0.0044 28.7 10.9 29 50-78 151-179 (385)
290 3vnd_A TSA, tryptophan synthas 48.5 87 0.003 28.2 9.3 37 295-331 133-170 (267)
291 3u43_A Colicin-E2 immunity pro 48.2 13 0.00045 28.4 3.1 48 251-311 28-80 (94)
292 1ur1_A Endoxylanase; hydrolase 48.2 38 0.0013 32.2 7.1 50 168-219 209-266 (378)
293 2eja_A URO-D, UPD, uroporphyri 48.0 1.6E+02 0.0056 26.8 11.4 81 173-265 244-334 (338)
294 1vli_A Spore coat polysacchari 47.8 1.9E+02 0.0065 27.5 13.5 93 173-276 126-225 (385)
295 1ka9_F Imidazole glycerol phos 47.8 1.1E+02 0.0038 26.4 9.8 80 172-263 35-121 (252)
296 3uhf_A Glutamate racemase; str 47.4 50 0.0017 29.9 7.5 35 156-191 62-98 (274)
297 3i65_A Dihydroorotate dehydrog 47.3 2E+02 0.0069 27.6 12.4 141 166-333 197-393 (415)
298 1yxy_A Putative N-acetylmannos 47.2 51 0.0018 28.4 7.4 88 172-273 92-191 (234)
299 3lab_A Putative KDPG (2-keto-3 47.1 1.2E+02 0.0042 26.4 9.7 101 172-314 76-184 (217)
300 3fkr_A L-2-keto-3-deoxyarabona 46.8 1.7E+02 0.0058 26.6 20.3 152 53-262 27-187 (309)
301 2vp8_A Dihydropteroate synthas 46.7 1.6E+02 0.0055 27.2 10.9 116 133-279 41-171 (318)
302 3cqj_A L-ribulose-5-phosphate 46.6 1.4E+02 0.0047 26.2 10.4 68 163-237 142-214 (295)
303 2fp4_B Succinyl-COA ligase [GD 46.5 80 0.0027 30.1 9.1 66 161-239 300-370 (395)
304 1ccw_A Protein (glutamate muta 46.2 74 0.0025 25.3 7.6 19 177-195 27-45 (137)
305 3fs2_A 2-dehydro-3-deoxyphosph 46.2 1.8E+02 0.0061 26.7 15.7 159 50-276 50-222 (298)
306 1jvn_A Glutamine, bifunctional 45.9 55 0.0019 32.7 8.2 97 174-273 353-501 (555)
307 1i4n_A Indole-3-glycerol phosp 45.8 94 0.0032 27.7 8.9 64 173-251 115-180 (251)
308 2qf7_A Pyruvate carboxylase pr 45.8 2.5E+02 0.0084 30.8 13.9 64 168-238 709-775 (1165)
309 1r85_A Endo-1,4-beta-xylanase; 45.8 44 0.0015 31.7 7.1 50 168-219 212-269 (379)
310 2d1z_A Endo-1,4-beta-D-xylanas 45.4 48 0.0017 31.8 7.5 49 169-219 184-240 (436)
311 3i65_A Dihydroorotate dehydrog 45.2 62 0.0021 31.2 8.1 86 210-314 182-300 (415)
312 2r14_A Morphinone reductase; H 45.2 1.3E+02 0.0045 28.3 10.4 146 162-330 160-343 (377)
313 4dpp_A DHDPS 2, dihydrodipicol 45.1 2E+02 0.0069 27.0 13.3 106 53-214 78-188 (360)
314 1pv8_A Delta-aminolevulinic ac 44.5 12 0.00042 34.9 2.8 25 51-75 294-318 (330)
315 2csu_A 457AA long hypothetical 44.4 1.8E+02 0.0063 28.0 11.6 84 169-265 355-446 (457)
316 3nl6_A Thiamine biosynthetic b 44.4 89 0.0031 31.1 9.4 85 170-259 27-124 (540)
317 2yxb_A Coenzyme B12-dependent 44.3 76 0.0026 26.0 7.6 45 228-273 56-105 (161)
318 4exq_A UPD, URO-D, uroporphyri 44.3 2E+02 0.0069 26.8 12.8 40 295-334 310-357 (368)
319 1ypx_A Putative vitamin-B12 in 44.0 1.6E+02 0.0054 27.7 10.8 143 163-321 162-337 (375)
320 3d0c_A Dihydrodipicolinate syn 43.9 1.9E+02 0.0065 26.4 20.0 146 53-262 31-182 (314)
321 2htm_A Thiazole biosynthesis p 43.8 1.8E+02 0.0063 26.2 13.1 27 52-81 23-49 (268)
322 1o5k_A DHDPS, dihydrodipicolin 43.8 1.9E+02 0.0064 26.3 22.4 154 53-263 31-189 (306)
323 4hb7_A Dihydropteroate synthas 43.7 1.9E+02 0.0063 26.2 15.4 118 133-279 6-136 (270)
324 3dx5_A Uncharacterized protein 43.7 1.4E+02 0.0048 25.9 9.9 140 54-238 47-191 (286)
325 4ab4_A Xenobiotic reductase B; 43.6 1.6E+02 0.0054 27.7 10.6 110 160-273 142-284 (362)
326 1w1z_A Delta-aminolevulinic ac 43.6 13 0.00044 34.7 2.8 25 51-75 294-318 (328)
327 2r8w_A AGR_C_1641P; APC7498, d 43.5 2E+02 0.0068 26.5 23.0 108 53-214 53-165 (332)
328 3mcm_A 2-amino-4-hydroxy-6-hyd 43.4 2.4E+02 0.0081 27.4 13.7 154 132-311 189-358 (442)
329 3m5v_A DHDPS, dihydrodipicolin 43.3 1.9E+02 0.0064 26.2 22.3 153 53-262 26-184 (301)
330 1oy0_A Ketopantoate hydroxymet 43.2 27 0.00092 32.0 4.9 40 168-213 179-218 (281)
331 3l5l_A Xenobiotic reductase A; 43.2 25 0.00087 33.1 5.0 28 55-82 36-63 (363)
332 3b0p_A TRNA-dihydrouridine syn 42.9 1.8E+02 0.006 27.0 10.8 99 169-273 71-202 (350)
333 1gte_A Dihydropyrimidine dehyd 42.7 1.6E+02 0.0055 31.5 11.8 71 169-248 649-734 (1025)
334 1h7n_A 5-aminolaevulinic acid 42.6 13 0.00044 34.9 2.6 25 51-75 305-329 (342)
335 1l6s_A Porphobilinogen synthas 42.5 13 0.00044 34.6 2.6 25 51-75 287-311 (323)
336 2vws_A YFAU, 2-keto-3-deoxy su 42.3 1.7E+02 0.0059 25.9 10.3 78 173-263 31-112 (267)
337 1yxy_A Putative N-acetylmannos 42.3 1.6E+02 0.0055 25.1 13.4 93 172-275 40-140 (234)
338 3tha_A Tryptophan synthase alp 42.3 1.1E+02 0.0039 27.3 8.9 89 172-273 107-204 (252)
339 4adt_A Pyridoxine biosynthetic 42.2 29 0.001 32.0 5.1 60 174-250 93-153 (297)
340 3gka_A N-ethylmaleimide reduct 41.9 1.6E+02 0.0054 27.6 10.3 108 162-273 155-292 (361)
341 2wqp_A Polysialic acid capsule 41.4 2.3E+02 0.0078 26.6 11.6 157 52-276 32-214 (349)
342 3obk_A Delta-aminolevulinic ac 41.1 15 0.0005 34.6 2.8 25 51-75 308-332 (356)
343 2yv4_A Hypothetical protein PH 41.0 51 0.0018 25.3 5.6 45 162-206 53-97 (105)
344 2wlt_A L-asparaginase; hydrola 40.6 55 0.0019 30.5 6.8 50 172-223 233-285 (332)
345 2o0t_A Diaminopimelate decarbo 40.1 1.5E+02 0.0052 28.5 10.2 70 179-251 130-215 (467)
346 2qjg_A Putative aldolase MJ040 39.9 1.9E+02 0.0065 25.3 12.8 141 172-332 49-201 (273)
347 4ed9_A CAIB/BAIF family protei 39.9 49 0.0017 31.5 6.4 39 51-94 82-120 (385)
348 2zbt_A Pyridoxal biosynthesis 39.9 48 0.0016 29.9 6.2 17 59-75 32-48 (297)
349 3ubm_A COAT2, formyl-COA:oxala 39.8 66 0.0022 31.4 7.4 39 51-94 100-138 (456)
350 1rpx_A Protein (ribulose-phosp 39.7 1.1E+02 0.0038 26.1 8.4 84 171-265 26-116 (230)
351 1ypx_A Putative vitamin-B12 in 39.6 44 0.0015 31.6 6.0 17 173-189 256-273 (375)
352 3qz6_A HPCH/HPAI aldolase; str 39.5 2E+02 0.0069 25.4 10.7 78 173-263 29-110 (261)
353 3hdg_A Uncharacterized protein 39.3 1.1E+02 0.0039 22.7 7.6 73 180-264 50-123 (137)
354 3tjx_A Dihydroorotate dehydrog 39.2 1.3E+02 0.0044 27.8 9.2 57 209-274 126-199 (354)
355 1n82_A Xylanase, intra-cellula 39.2 60 0.002 30.0 6.8 51 167-219 187-245 (331)
356 1fr2_A Colicin E9 immunity pro 38.9 23 0.00078 26.6 3.1 45 254-311 31-80 (86)
357 2yci_X 5-methyltetrahydrofolat 38.9 2.1E+02 0.0073 25.6 15.2 96 163-276 33-133 (271)
358 1nvm_A HOA, 4-hydroxy-2-oxoval 38.7 2.4E+02 0.0081 26.0 15.5 151 161-343 27-198 (345)
359 3n3m_A Orotidine 5'-phosphate 38.5 52 0.0018 31.0 6.2 147 172-332 108-275 (342)
360 3out_A Glutamate racemase; str 38.2 95 0.0032 27.8 7.8 32 156-188 45-76 (268)
361 3ble_A Citramalate synthase fr 38.1 1.2E+02 0.0041 28.0 8.8 96 174-275 102-220 (337)
362 2og9_A Mandelate racemase/muco 38.1 2.5E+02 0.0087 26.2 11.5 147 162-325 162-324 (393)
363 2isw_A Putative fructose-1,6-b 38.1 1.6E+02 0.0054 27.4 9.4 114 192-330 114-246 (323)
364 2hk0_A D-psicose 3-epimerase; 38.1 1.1E+02 0.0037 27.2 8.3 104 163-275 146-265 (309)
365 2yim_A Probable alpha-methylac 38.1 56 0.0019 30.8 6.5 41 49-94 59-99 (360)
366 2w5f_A Endo-1,4-beta-xylanase 38.0 1.6E+02 0.0054 29.2 10.1 50 168-219 394-453 (540)
367 3m47_A Orotidine 5'-phosphate 37.8 66 0.0023 28.1 6.5 34 174-207 84-117 (228)
368 1qo2_A Molecule: N-((5-phospho 37.8 1.9E+02 0.0066 24.7 11.0 72 173-259 35-115 (241)
369 1w5q_A Delta-aminolevulinic ac 37.8 17 0.00059 33.9 2.7 24 51-75 301-324 (337)
370 2qul_A D-tagatose 3-epimerase; 37.7 94 0.0032 27.0 7.7 104 163-275 128-247 (290)
371 3gnn_A Nicotinate-nucleotide p 37.4 86 0.0029 28.9 7.4 58 177-250 225-282 (298)
372 2rdx_A Mandelate racemase/muco 37.4 1.4E+02 0.0048 27.8 9.2 95 230-330 149-257 (379)
373 1q7e_A Hypothetical protein YF 37.3 57 0.0019 31.6 6.5 40 50-94 75-114 (428)
374 1wbh_A KHG/KDPG aldolase; lyas 37.2 2E+02 0.0068 24.7 12.6 110 172-324 79-192 (214)
375 1ta3_B Endo-1,4-beta-xylanase; 37.2 1.6E+02 0.0054 26.8 9.3 77 168-252 184-269 (303)
376 2nq5_A 5-methyltetrahydroptero 37.0 2.2E+02 0.0075 29.6 11.3 133 163-320 176-321 (755)
377 2jfz_A Glutamate racemase; cel 36.7 87 0.003 27.6 7.3 49 161-213 42-90 (255)
378 1vyr_A Pentaerythritol tetrani 36.7 2.6E+02 0.009 26.0 12.0 145 163-330 156-338 (364)
379 3sy1_A UPF0001 protein YGGS; e 36.6 72 0.0024 28.2 6.6 67 182-251 98-167 (245)
380 1f6y_A 5-methyltetrahydrofolat 36.5 2.3E+02 0.0078 25.2 14.6 117 173-312 30-153 (262)
381 3vkj_A Isopentenyl-diphosphate 36.4 2.7E+02 0.0093 26.0 14.2 142 167-329 75-232 (368)
382 1a0c_A Xylose isomerase; ketol 36.3 66 0.0023 31.1 6.8 82 164-250 206-298 (438)
383 1x1o_A Nicotinate-nucleotide p 36.1 1.2E+02 0.004 27.7 8.1 56 177-248 212-267 (286)
384 3u7b_A Endo-1,4-beta-xylanase; 35.8 2.6E+02 0.009 25.7 10.9 47 168-216 184-245 (327)
385 1xyz_A 1,4-beta-D-xylan-xylano 35.8 2.3E+02 0.0077 26.2 10.3 49 168-218 209-267 (347)
386 1pii_A N-(5'phosphoribosyl)ant 35.7 1.4E+02 0.0047 29.1 9.0 136 173-331 122-274 (452)
387 3usb_A Inosine-5'-monophosphat 35.7 3.2E+02 0.011 26.7 12.9 66 171-248 258-324 (511)
388 3hbl_A Pyruvate carboxylase; T 35.6 3.5E+02 0.012 29.6 13.0 63 168-237 692-757 (1150)
389 3fa4_A 2,3-dimethylmalate lyas 35.3 2.6E+02 0.009 25.5 15.9 93 172-273 99-212 (302)
390 4e7p_A Response regulator; DNA 35.3 1.5E+02 0.0051 22.6 10.2 75 177-263 62-137 (150)
391 3cpg_A Uncharacterized protein 35.2 70 0.0024 28.7 6.5 67 182-251 135-204 (282)
392 1w32_A Endo-1,4-beta-xylanase 35.2 67 0.0023 30.0 6.5 49 169-219 193-251 (348)
393 3ufx_B Succinyl-COA synthetase 35.2 1.4E+02 0.0047 28.4 8.8 85 161-263 284-373 (397)
394 3e96_A Dihydrodipicolinate syn 35.1 2.6E+02 0.0089 25.4 17.4 108 53-215 31-143 (316)
395 3bo9_A Putative nitroalkan dio 35.0 2.6E+02 0.009 25.4 10.9 72 174-254 43-114 (326)
396 1qop_A Tryptophan synthase alp 35.0 1.1E+02 0.0037 27.2 7.7 90 173-273 114-210 (268)
397 1fob_A Beta-1,4-galactanase; B 34.9 1.7E+02 0.0059 26.8 9.3 106 163-273 107-244 (334)
398 1jcn_A Inosine monophosphate d 34.7 1.8E+02 0.0063 28.3 9.9 44 229-273 255-301 (514)
399 2dqw_A Dihydropteroate synthas 34.6 2.7E+02 0.0091 25.4 11.0 120 133-279 28-158 (294)
400 3niy_A Endo-1,4-beta-xylanase; 34.6 2.5E+02 0.0087 26.0 10.4 48 168-217 203-257 (341)
401 3ajx_A 3-hexulose-6-phosphate 34.5 2E+02 0.0068 23.9 13.1 90 174-275 70-165 (207)
402 3apt_A Methylenetetrahydrofola 34.4 2.5E+02 0.0087 25.5 10.2 153 20-218 44-210 (310)
403 2pp0_A L-talarate/galactarate 34.2 2.9E+02 0.01 25.8 11.4 148 162-326 175-338 (398)
404 3grf_A Ornithine carbamoyltran 34.2 2.6E+02 0.009 25.8 10.3 104 161-278 16-129 (328)
405 2ps2_A Putative mandelate race 34.1 2.2E+02 0.0076 26.2 10.0 85 241-330 160-259 (371)
406 1tqj_A Ribulose-phosphate 3-ep 34.1 75 0.0026 27.7 6.3 40 174-216 78-119 (230)
407 2wx3_A MRNA-decapping enzyme 1 34.1 20 0.00069 24.1 1.8 17 51-67 25-41 (51)
408 1rd5_A Tryptophan synthase alp 34.0 2.4E+02 0.0081 24.6 13.1 24 253-276 79-104 (262)
409 1gxg_A Colicin E8 immunity pro 33.9 24 0.00083 26.4 2.5 43 256-311 32-79 (85)
410 1thf_D HISF protein; thermophI 33.8 2.3E+02 0.0077 24.3 10.4 79 173-263 35-120 (253)
411 1i1w_A Endo-1,4-beta-xylanase; 33.7 94 0.0032 28.2 7.1 50 168-219 185-241 (303)
412 2oho_A Glutamate racemase; iso 33.3 1.5E+02 0.005 26.4 8.3 28 161-188 54-81 (273)
413 3qxc_A Dethiobiotin synthetase 33.3 1.3E+02 0.0043 26.5 7.7 79 161-254 116-202 (242)
414 4af0_A Inosine-5'-monophosphat 33.2 1.8E+02 0.0062 29.1 9.4 48 170-217 282-330 (556)
415 3tha_A Tryptophan synthase alp 33.0 2.1E+02 0.0071 25.5 9.1 97 224-331 55-163 (252)
416 3o9z_A Lipopolysaccaride biosy 32.8 58 0.002 29.6 5.5 44 170-216 85-130 (312)
417 3l5a_A NADH/flavin oxidoreduct 32.8 1.1E+02 0.0037 29.4 7.7 75 232-314 174-282 (419)
418 1rvk_A Isomerase/lactonizing e 32.7 3E+02 0.01 25.4 13.2 143 162-321 149-314 (382)
419 3kto_A Response regulator rece 32.6 1.4E+02 0.0046 22.4 7.0 77 178-265 47-125 (136)
420 4ew6_A D-galactose-1-dehydroge 32.6 63 0.0021 29.6 5.8 46 169-217 93-140 (330)
421 1lc0_A Biliverdin reductase A; 32.5 71 0.0024 28.7 6.0 46 169-217 77-124 (294)
422 1j93_A UROD, uroporphyrinogen 32.4 2.9E+02 0.01 25.2 10.5 22 176-197 262-283 (353)
423 1o7j_A L-asparaginase; atomic 32.2 65 0.0022 29.9 5.8 50 172-223 232-284 (327)
424 2wx4_A DCP1, decapping protein 32.2 15 0.0005 24.2 0.9 16 52-67 24-39 (46)
425 3r7f_A Aspartate carbamoyltran 32.2 2.5E+02 0.0085 25.7 9.7 104 161-278 10-121 (304)
426 3eul_A Possible nitrate/nitrit 32.1 1.7E+02 0.0057 22.3 9.9 73 179-263 59-132 (152)
427 2vvt_A Glutamate racemase; iso 32.1 1.6E+02 0.0056 26.4 8.4 29 161-189 66-94 (290)
428 3cpr_A Dihydrodipicolinate syn 32.0 2.9E+02 0.0098 25.0 22.7 152 53-262 35-191 (304)
429 1h1y_A D-ribulose-5-phosphate 32.0 1.2E+02 0.0041 26.0 7.3 86 174-273 80-178 (228)
430 4f2d_A L-arabinose isomerase; 31.9 1.8E+02 0.0061 28.6 9.2 42 162-203 23-67 (500)
431 2poz_A Putative dehydratase; o 31.8 3.2E+02 0.011 25.4 13.6 150 162-329 137-319 (392)
432 1bxb_A Xylose isomerase; xylos 31.6 2E+02 0.0069 26.7 9.3 70 162-238 153-235 (387)
433 4fb5_A Probable oxidoreductase 31.6 52 0.0018 30.2 5.1 45 169-216 106-152 (393)
434 3k2g_A Resiniferatoxin-binding 31.3 2.7E+02 0.0091 26.0 10.0 27 50-76 81-107 (364)
435 1qap_A Quinolinic acid phospho 31.0 95 0.0033 28.4 6.6 56 178-249 225-280 (296)
436 2inf_A URO-D, UPD, uroporphyri 30.8 2.4E+02 0.0081 25.9 9.6 24 174-197 258-281 (359)
437 1o94_A Tmadh, trimethylamine d 30.6 3.5E+02 0.012 27.5 11.6 111 160-273 138-296 (729)
438 1j93_A UROD, uroporphyrinogen 30.5 3.1E+02 0.011 24.9 15.2 141 166-335 191-351 (353)
439 3u3x_A Oxidoreductase; structu 30.5 76 0.0026 29.4 6.0 45 169-216 100-146 (361)
440 3ixl_A Amdase, arylmalonate de 30.1 35 0.0012 30.2 3.4 43 229-272 54-102 (240)
441 3eeg_A 2-isopropylmalate synth 30.0 3.2E+02 0.011 25.0 15.5 147 161-336 25-193 (325)
442 2jfq_A Glutamate racemase; cel 30.0 1.7E+02 0.0057 26.3 8.1 28 161-188 64-91 (286)
443 2hsa_B 12-oxophytodienoate red 29.8 3.6E+02 0.012 25.5 11.6 146 162-330 165-363 (402)
444 3uuw_A Putative oxidoreductase 29.4 70 0.0024 28.6 5.4 45 169-216 78-124 (308)
445 1dqu_A Isocitrate lyase; beta 29.2 52 0.0018 32.9 4.7 56 179-237 386-446 (538)
446 2gzm_A Glutamate racemase; enz 29.1 3E+02 0.01 24.2 14.6 49 161-213 45-93 (267)
447 3ru6_A Orotidine 5'-phosphate 28.9 1.3E+02 0.0044 27.7 7.1 96 174-278 96-201 (303)
448 3oa2_A WBPB; oxidoreductase, s 28.9 73 0.0025 29.0 5.5 45 169-216 85-131 (318)
449 1p1p_A AA-conotoxin PIVA; neur 28.8 15 0.0005 20.7 0.4 8 316-323 1-8 (26)
450 3hzh_A Chemotaxis response reg 28.8 2E+02 0.0068 22.1 9.3 7 182-188 84-90 (157)
451 1nns_A L-asparaginase II; amid 28.8 1.2E+02 0.0039 28.2 6.9 50 172-223 226-278 (326)
452 3aty_A Tcoye, prostaglandin F2 28.6 2.1E+02 0.0072 26.9 8.8 111 160-273 162-312 (379)
453 3kts_A Glycerol uptake operon 28.5 39 0.0013 29.1 3.3 45 225-273 111-155 (192)
454 4gqa_A NAD binding oxidoreduct 28.4 77 0.0026 29.8 5.7 45 169-216 108-154 (412)
455 3e82_A Putative oxidoreductase 28.2 72 0.0025 29.5 5.4 45 169-216 79-125 (364)
456 3tpf_A Otcase, ornithine carba 28.2 3.5E+02 0.012 24.7 10.3 100 161-272 11-117 (307)
457 2v5j_A 2,4-dihydroxyhept-2-ENE 28.0 3.3E+02 0.011 24.4 10.4 78 173-263 52-133 (287)
458 3n2b_A Diaminopimelate decarbo 27.9 3.2E+02 0.011 26.0 10.2 70 178-250 140-223 (441)
459 2ekc_A AQ_1548, tryptophan syn 27.9 3.1E+02 0.011 24.1 13.3 19 171-189 34-52 (262)
460 3ip3_A Oxidoreductase, putativ 27.7 85 0.0029 28.6 5.8 45 169-216 79-127 (337)
461 3ixl_A Amdase, arylmalonate de 27.7 3E+02 0.01 23.8 14.4 150 161-333 43-205 (240)
462 4a0g_A Adenosylmethionine-8-am 27.6 1.3E+02 0.0044 31.6 7.7 103 161-275 175-292 (831)
463 3qr3_A Endoglucanase EG-II; TI 27.4 3.6E+02 0.012 24.7 11.2 126 53-215 41-182 (340)
464 2fiq_A Putative tagatose 6-pho 27.1 2.7E+02 0.0092 26.8 9.3 84 232-322 3-92 (420)
465 3rpd_A Methionine synthase (B1 27.1 3.4E+02 0.011 25.3 9.9 20 173-192 251-270 (357)
466 3igs_A N-acetylmannosamine-6-p 27.0 3.1E+02 0.01 23.7 18.5 93 171-275 39-136 (232)
467 1eep_A Inosine 5'-monophosphat 27.0 2.7E+02 0.0093 26.1 9.4 41 232-273 156-199 (404)
468 1r3s_A URO-D, uroporphyrinogen 27.0 3.7E+02 0.013 24.7 16.5 137 170-335 199-360 (367)
469 3sz8_A 2-dehydro-3-deoxyphosph 27.0 2.5E+02 0.0085 25.5 8.6 91 174-276 104-203 (285)
470 3oqb_A Oxidoreductase; structu 26.9 62 0.0021 30.0 4.7 44 170-216 96-141 (383)
471 3ldv_A Orotidine 5'-phosphate 26.8 3.4E+02 0.011 24.1 13.4 123 195-333 66-194 (255)
472 1wsa_A Asparaginase, asparagin 26.7 82 0.0028 29.2 5.5 50 172-223 230-282 (330)
473 3r79_A Uncharacterized protein 26.5 1.4E+02 0.0049 26.3 6.8 67 182-251 98-167 (244)
474 2o7s_A DHQ-SDH PR, bifunctiona 26.4 79 0.0027 31.1 5.6 95 173-275 84-181 (523)
475 1tlt_A Putative oxidoreductase 26.4 1.1E+02 0.0037 27.5 6.2 46 169-217 77-124 (319)
476 3kht_A Response regulator; PSI 26.3 2E+02 0.007 21.4 10.1 77 176-263 46-125 (144)
477 3dm5_A SRP54, signal recogniti 26.1 4.5E+02 0.015 25.3 13.3 102 171-280 172-277 (443)
478 2qxy_A Response regulator; reg 26.0 2E+02 0.007 21.3 11.1 77 176-264 43-119 (142)
479 3mfq_A TROA, high-affinity zin 25.9 1E+02 0.0034 27.8 5.8 48 161-214 196-243 (282)
480 1qwg_A PSL synthase;, (2R)-pho 25.7 3.6E+02 0.012 24.0 12.8 118 178-314 35-165 (251)
481 3e18_A Oxidoreductase; dehydro 25.6 1E+02 0.0035 28.4 6.0 45 169-216 77-123 (359)
482 3eod_A Protein HNR; response r 25.6 2E+02 0.0067 21.0 10.3 76 177-263 47-123 (130)
483 2p2s_A Putative oxidoreductase 25.4 91 0.0031 28.3 5.5 45 169-216 78-124 (336)
484 3t7v_A Methylornithine synthas 25.3 2.6E+02 0.009 25.3 8.8 15 303-317 286-300 (350)
485 3t7v_A Methylornithine synthas 25.3 3.8E+02 0.013 24.2 13.0 129 161-337 91-231 (350)
486 1p1x_A Deoxyribose-phosphate a 25.2 39 0.0013 30.5 2.8 29 50-78 145-174 (260)
487 1muw_A Xylose isomerase; atomi 25.2 2.3E+02 0.0077 26.3 8.4 71 164-237 155-234 (386)
488 1dxe_A 2-dehydro-3-deoxy-galac 25.1 3.3E+02 0.011 23.8 9.0 79 173-264 32-114 (256)
489 4f8x_A Endo-1,4-beta-xylanase; 25.1 1.8E+02 0.0062 27.0 7.5 47 168-216 191-245 (335)
490 3cu2_A Ribulose-5-phosphate 3- 24.9 90 0.0031 27.5 5.1 31 173-206 84-116 (237)
491 3ohs_X Trans-1,2-dihydrobenzen 24.9 1.1E+02 0.0038 27.7 6.0 45 169-216 78-124 (334)
492 2c6q_A GMP reductase 2; TIM ba 24.8 4.2E+02 0.014 24.5 12.6 65 172-248 121-188 (351)
493 3fok_A Uncharacterized protein 24.7 4.1E+02 0.014 24.4 13.3 92 171-274 74-182 (307)
494 3gdo_A Uncharacterized oxidore 24.7 1.1E+02 0.0038 28.1 6.0 45 169-216 77-123 (358)
495 2fds_A Orotidine-monophosphate 24.6 1.8E+02 0.0061 27.3 7.4 152 167-332 105-277 (352)
496 3ezy_A Dehydrogenase; structur 24.6 1.1E+02 0.0039 27.7 6.0 45 169-216 76-122 (344)
497 1twi_A Diaminopimelate decarbo 24.6 4.4E+02 0.015 24.7 10.8 70 179-251 125-210 (434)
498 3ff4_A Uncharacterized protein 24.5 1.4E+02 0.0047 23.4 5.6 57 182-253 59-115 (122)
499 3rc1_A Sugar 3-ketoreductase; 24.5 1.1E+02 0.0038 28.0 6.0 46 169-217 101-148 (350)
500 3m2t_A Probable dehydrogenase; 24.4 1E+02 0.0036 28.3 5.8 46 169-217 80-127 (359)
No 1
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=100.00 E-value=1.1e-70 Score=540.82 Aligned_cols=289 Identities=22% Similarity=0.333 Sum_probs=247.8
Q ss_pred hHHHHHhhccCCeEEEecchHHHHHHcCCCCCCCccchhccCCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCC
Q 019107 10 SFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGF 89 (346)
Q Consensus 10 ~~~~~~l~~~~~~lilDGg~gt~L~~~G~~~~~~lwsa~~ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~ 89 (346)
+.|.++|++ ++++||||||||+|+++|++.. ++|++++++++||+|+++|++|++||||||+||||++|+.+|.++|+
T Consensus 11 ~~l~~~L~~-~~ilIlDGgmGT~L~~~G~~~~-~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~ 88 (406)
T 1lt8_A 11 KGILERLNA-GEIVIGDGGFVFALEKRGYVKA-GPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGN 88 (406)
T ss_dssp CCHHHHHHT-TCCEECCCCHHHHHHHHTSSCT-TTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC------
T ss_pred HHHHHHHhc-CCEEEEeCccchHHHHCCCCCC-cccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCC
Confidence 458899983 3599999999999999998763 58999999999999999999999999999999999999999999997
Q ss_pred CH---HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHH
Q 019107 90 ST---EEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETL 166 (346)
Q Consensus 90 ~~---~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~ 166 (346)
+. +++++||++||+|||+|++. .+++|||||||+|.++. .++++++
T Consensus 89 ~~~~~~~~~eln~~Av~LAreAa~~--------------------~~~~VAGsIGP~g~~l~-----------~~s~eel 137 (406)
T 1lt8_A 89 YVLEKISGQEVNEAAADIARQVADE--------------------GDALVAGGVSQTPSYLS-----------AKSETEV 137 (406)
T ss_dssp -------CHHHHHHHHHHHHHHHTT--------------------TTCEEEEEECCCHHHHT-----------TCHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhc--------------------CCCEEEEEcCCcccccC-----------CCCHHHH
Confidence 42 45789999999999999852 25799999999997552 2689999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE
Q 019107 167 KEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (346)
Q Consensus 167 ~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av 246 (346)
+++|++|+++|.++|||+|++|||+++.|++++++++++.+ +|||+||++.++++ ++|+++.+++..+.+ .++++|
T Consensus 138 ~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~--lPv~iS~T~~~~G~-l~G~~~~~~~~~l~~-~~~~av 213 (406)
T 1lt8_A 138 KKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASG--KPVAATMAIGPEGD-LHGVPPGEAAVRLVK-AGASII 213 (406)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGT--SCEEEEECCBTTBC-TTCCCHHHHHHHHHT-TTCSEE
T ss_pred HHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhC--CcEEEEEEECCCCC-cCCCcHHHHHHHhhc-CCCCEE
Confidence 99999999999999999999999999999999999999865 99999999988888 899999999998876 479999
Q ss_pred EECCC-ChhhHHHHHHHHhhhc-----CCcEEEeeCCCCcccccccccccc----CCCChH-----HHHHHHHHHHHcCC
Q 019107 247 GINCT-SPRFIHGLILSVRKVT-----SKPVIIYPNSGETYNAELKKWVES----TGVRDE-----DFVSYIGKWRDAGA 311 (346)
Q Consensus 247 GvNC~-~p~~~~~~l~~l~~~~-----~~pl~vypN~g~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~G~ 311 (346)
||||+ +|+.+.++++.+++.. +.|+++|||+|..|+.....|... ...+|+ +|++++++|++.|+
T Consensus 214 GvNC~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~w~~~Ga 293 (406)
T 1lt8_A 214 GVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGV 293 (406)
T ss_dssp EEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTE
T ss_pred EecCCCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 99997 8999999999998764 789999999998777544566531 123444 59999999999999
Q ss_pred eEEeecCCCchHHHHHHHHHHcCC
Q 019107 312 SLFGGCCRTTPNTIKAISRVLSNK 335 (346)
Q Consensus 312 ~ivGGCCGt~P~hI~al~~~~~~~ 335 (346)
+||||||||||+||++|++.++..
T Consensus 294 ~iIGGCCGTtPeHI~aia~~l~~~ 317 (406)
T 1lt8_A 294 RYIGGCCGFEPYHIRAIAEELAPE 317 (406)
T ss_dssp EEECCCTTCCHHHHHHHHHHTHHH
T ss_pred eEEEEecCCCHHHHHHHHHHHhcc
Confidence 999999999999999999998744
No 2
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=100.00 E-value=2.3e-69 Score=552.86 Aligned_cols=287 Identities=27% Similarity=0.441 Sum_probs=259.7
Q ss_pred hHHHHHhhccCCeEEEecchHHHHHHcCCCCCCCccchhccCCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCC
Q 019107 10 SFMTDFLQKCGGYSVVDGGFATELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGF 89 (346)
Q Consensus 10 ~~~~~~l~~~~~~lilDGg~gt~L~~~G~~~~~~lwsa~~ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~ 89 (346)
..|.++|+ ++++|+||||||+|+++|++...++|+ +++||+|+++|++|++||||||+||||++|+.+|.++|+
T Consensus 5 ~~l~~~l~--~~ililDGamGT~L~~~g~~~~~el~~----l~~Pe~V~~iH~~Yl~AGAdii~TnTf~a~~~~l~~~g~ 78 (566)
T 1q7z_A 5 REVSKLLS--ERVLLLDGAYGTEFMKYGYDDLPEELN----IKAPDVVLKVHRSYIESGSDVILTNTFGATRMKLRKHGL 78 (566)
T ss_dssp HHHHHHHH--HCCEECCCCSHHHHHHTTCCSCGGGHH----HHCHHHHHHHHHHHHHHTCSEEECSCTTCSHHHHGGGTC
T ss_pred hHHHHHHc--CCeEEEEChHHHHHHHCCCCCCchhhc----ccCHHHHHHHHHHHHHhhcceeecCcccCCHHHHHhcCc
Confidence 46888887 689999999999999999987778896 899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHH
Q 019107 90 STEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEF 169 (346)
Q Consensus 90 ~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~ 169 (346)
+ +++++||++||+|||+|++ . + +|||||||+|.++. +|+. +++++++++
T Consensus 79 ~-~~~~el~~~av~lAr~a~~--------------------~-~-~VAGsiGP~g~~~~-------~~~~-~~~~e~~~~ 127 (566)
T 1q7z_A 79 E-DKLDPIVRNAVRIARRAAG--------------------E-K-LVFGDIGPTGELPY-------PLGS-TLFEEFYEN 127 (566)
T ss_dssp G-GGHHHHHHHHHHHHHHHHT--------------------T-S-EEEEEECCCSCCBT-------TTSS-BCHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHHHHh--------------------C-C-eEEEeCCCcccCCC-------CCCC-CCHHHHHHH
Confidence 7 6799999999999999974 1 4 99999999998652 3443 799999999
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
|++|+++|.++|||+|++|||+++.|++++++++++...++|+|+||++++++++++|+++.+++..+++ .++++||+|
T Consensus 128 ~~~qi~~l~~~gvD~l~~ET~~~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~-~~~~avG~N 206 (566)
T 1q7z_A 128 FRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFAITFDE-LDIDALGIN 206 (566)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHHHHHHT-SSCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHHHHhhc-cCCCEEEEe
Confidence 9999999999999999999999999999999999985236999999999999999999999999999976 579999999
Q ss_pred CC-ChhhHHHHHHHHhhhcCCcEEEeeCCCCcc--ccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCCCchHHHH
Q 019107 250 CT-SPRFIHGLILSVRKVTSKPVIIYPNSGETY--NAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIK 326 (346)
Q Consensus 250 C~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCGt~P~hI~ 326 (346)
|+ +|+.+.++|+.+++.++.|+++|||+|..+ ++. ..|. .+|++|++++++|++.|++||||||||||+||+
T Consensus 207 C~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~-~~~~----~~p~~~a~~~~~~~~~G~~iiGGCCGTtP~hI~ 281 (566)
T 1q7z_A 207 CSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGK-TVYP----LKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVK 281 (566)
T ss_dssp SSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTE-EECC----CCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCc-cccC----CCHHHHHHHHHHHHHcCCcEEccccCCCHHHHH
Confidence 96 899999999999998899999999999876 332 2353 368999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC
Q 019107 327 AISRVLSNKSLPS 339 (346)
Q Consensus 327 al~~~~~~~~~~~ 339 (346)
+|++.++..+|..
T Consensus 282 aia~~~~~~~p~~ 294 (566)
T 1q7z_A 282 LFRKVLGNRKPLQ 294 (566)
T ss_dssp HHHHHHCSCCCCC
T ss_pred HHHHHhcCCCCCC
Confidence 9999999877643
No 3
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=95.61 E-value=0.53 Score=47.76 Aligned_cols=226 Identities=14% Similarity=0.056 Sum_probs=129.6
Q ss_pred hHHHHHHHH----HHHHhhcceeeccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019107 54 PHLVRKVHL----DYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (346)
Q Consensus 54 Pe~V~~iH~----~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (346)
.+.+++.|+ .++++|+|+|.--|+.... +++ .+++.+++..
T Consensus 121 ~~e~~~~~~~qi~~l~~~gvD~l~~ET~~~~~-----------Ea~----aa~~a~~~~~-------------------- 165 (566)
T 1q7z_A 121 FEEFYENFRETVEIMVEEGVDGIIFETFSDIL-----------ELK----AAVLAAREVS-------------------- 165 (566)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEECCHH-----------HHH----HHHHHHHHHC--------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEeccCCHH-----------HHH----HHHHHHHHhC--------------------
Confidence 466777775 4568999999988887432 222 2333333220
Q ss_pred CCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCC
Q 019107 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGIT 209 (346)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~ 209 (346)
.+.|++|+.++..-|..+. | .+.+++.. .+...++|.+-+..-..++++..+++.+++.. +
T Consensus 166 ~~~Pv~vS~t~~~~g~~~~-G----------~~~~~~~~-------~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~-~ 226 (566)
T 1q7z_A 166 RDVFLIAHMTFDEKGRSLT-G----------TDPANFAI-------TFDELDIDALGINCSLGPEEILPIFQELSQYT-D 226 (566)
T ss_dssp SSSCEEEEECCCTTSCCTT-S----------CCHHHHHH-------HHHTSSCSEEEEESSSCHHHHHHHHHHHHHTC-C
T ss_pred CCCcEEEEEEEcCCCeeCC-C----------CcHHHHHH-------HhhccCCCEEEEeCCCCHHHHHHHHHHHHhcC-C
Confidence 2458999999987665442 2 35555533 44557899999998778999999999888753 5
Q ss_pred CcEEEEEEE-cC---CCcccCCCCHHHHHHH---hhcCCCceEEEECCC-ChhhHHHHHHHHhhhcCC--cE---EEeeC
Q 019107 210 IPAWFSFNS-KD---GINVVSGDSILECASI---ADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSK--PV---IIYPN 276 (346)
Q Consensus 210 ~pv~is~~~-~~---~~~l~~G~~~~~av~~---~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~--pl---~vypN 276 (346)
+|+.+--.. .+ ++....-.+..+..+. ..+ .++..||==|. .|+++..+-+.+...... |. .+.-.
T Consensus 227 ~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~-~G~~iiGGCCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s 305 (566)
T 1q7z_A 227 KFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYE-LGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSS 305 (566)
T ss_dssp SEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHH-TTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEEC
T ss_pred CEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHH-cCCcEEccccCCCHHHHHHHHHHhcCCCCCCcccCccceecC
Confidence 666432210 00 1221112234444333 323 36788887774 799999988877654211 10 00000
Q ss_pred C------------CCccccc-ccccccc-CCCChHHHHHHHHHHHHcCCeEEeecCCCc----hHHHHHHHHHHcC
Q 019107 277 S------------GETYNAE-LKKWVES-TGVRDEDFVSYIGKWRDAGASLFGGCCRTT----PNTIKAISRVLSN 334 (346)
Q Consensus 277 ~------------g~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~G~~ivGGCCGt~----P~hI~al~~~~~~ 334 (346)
. |+..|.+ .+.+... ...+.+...+.+++.++.||.||==+.|.. +++++.+-..++.
T Consensus 306 ~~~~~~~~~~~iiGer~N~Tg~dsf~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~~~ee~~rvv~~i~~ 381 (566)
T 1q7z_A 306 PSKLVTFDHFVVIGERINPAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPY 381 (566)
T ss_dssp SSCEEESSSCEEEEEEECCTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHH
T ss_pred CceeeccccceEEEEEecCCCChhHHHHhhcCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHh
Confidence 0 1101111 0111100 011345556667888899999976556753 7778777777643
No 4
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.56 E-value=0.22 Score=46.75 Aligned_cols=104 Identities=21% Similarity=0.159 Sum_probs=71.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ .++.+.+.|||.|++ -|.. +.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 40 iD~~~l~~----li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~~a 106 (315)
T 3si9_A 40 IDEKAFCN----FVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA---------GSNSTSEA 106 (315)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 67665554 677777899999873 2222 567877788776653 3368999877 34567777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 107 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEeCc
Confidence 775532 257888887652 34567777778877789999999653
No 5
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.35 E-value=0.32 Score=45.03 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (294)
T 2ehh_A 18 VDYEALGN----LIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGT---------GGNATHEA 84 (294)
T ss_dssp ECHHHHHH----HHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67655544 677788899998875 32 2266777778877665 33368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 135 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIP 135 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 765532 258899888653 24566677777777789999999654
No 6
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.32 E-value=0.92 Score=42.31 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=90.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ +++.+.+.|||.|++ -|-. +.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 26 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 92 (309)
T 3fkr_A 26 LDLASQKR----AVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT---------SHYSTQVC 92 (309)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCchHHHH
Confidence 67655544 677777899998765 2222 677777788776653 3368999887 34566777
Q ss_pred HHHhhc--CCCceEEEECC--------CChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHH
Q 019107 234 ASIADS--CEQVVAVGINC--------TSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYI 303 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC--------~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (346)
++..+. ..+++++.+-. .+.+.+....+.+.+.++.|+++|-+-+ ....++++.+.+.+
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~-----------tg~~l~~~~~~~La 161 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA-----------SGTALSAPFLARMA 161 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG-----------GCCCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC-----------CCCCCCHHHHHHHH
Confidence 765532 25789988854 2345666777777777899999995431 11225566666554
Q ss_pred HHHHHcCCeEEeec--CCCchHHHHHHHHHH
Q 019107 304 GKWRDAGASLFGGC--CRTTPNTIKAISRVL 332 (346)
Q Consensus 304 ~~~~~~G~~ivGGC--CGt~P~hI~al~~~~ 332 (346)
++. -+|+|== |+....+++++.+..
T Consensus 162 ~~~----pnIvgiK~~~~~~~~~~~~~~~~~ 188 (309)
T 3fkr_A 162 REI----EQVAYFXIETPGAANKLRELIRLG 188 (309)
T ss_dssp HHS----TTEEEEEECSSSHHHHHHHHHHHH
T ss_pred hhC----CCEEEEECCCcchHHHHHHHHHhc
Confidence 332 4566621 233456676666554
No 7
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.16 E-value=0.32 Score=44.95 Aligned_cols=104 Identities=15% Similarity=0.088 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-cc----C-CCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ET----I-PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET----~-~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.++|||.|++ -| . -+.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (289)
T 2yxg_A 18 VDFDGLEE----NINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGA---------GSNCTEEA 84 (289)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 67655544 677778899998874 22 1 266777778877665 33368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 135 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIVLYNVP 135 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888888663 23566777777777789999999654
No 8
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.12 E-value=0.32 Score=45.00 Aligned_cols=104 Identities=15% Similarity=0.119 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 84 (292)
T 2vc6_A 18 IDEVALHD----LVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA---------GSNSTAEA 84 (292)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 67655544 677778899999874 32 23667777888776653 3368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+..- +.+.+....+.+.+.++.|+++|-+-
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 765532 258899988774 24566677777777789999999763
No 9
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.08 E-value=0.34 Score=45.18 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~~st~~a 96 (306)
T 1o5k_A 30 LDLESYER----LVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA---------GTNSTEKT 96 (306)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC---------CCccHHHH
Confidence 67655544 677778899998875 32 23667877888776653 3368999877 34466777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 147 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVP 147 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 765532 247888888652 34666777777777788999999654
No 10
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.04 E-value=0.41 Score=44.87 Aligned_cols=104 Identities=17% Similarity=0.142 Sum_probs=72.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+++.|||.|++ -|.. +.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 42 iD~~~l~~----lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~~t~~a 108 (315)
T 3na8_A 42 LDLPALGR----SIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV---------SDLTTAKT 108 (315)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67665554 677778899998763 2221 567878888877663 3368999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 109 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 159 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNP 159 (315)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence 775532 258899988763 24667777778877789999999653
No 11
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.98 E-value=1 Score=42.12 Aligned_cols=146 Identities=11% Similarity=0.010 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccC-----CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETI-----PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+.+ .++.+++.|||.|++ -|. -+.+|=+.+++.+.+.....||++.. .+.+..+++
T Consensus 26 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~ai 92 (313)
T 3dz1_A 26 IDDVSIDR----LTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAMR 92 (313)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHHH
Confidence 67655544 677778899998774 222 25678778887776643368999876 345677777
Q ss_pred HHhhc--CCCceEEEECCC----ChhhHHHHHHHHhhhcC--CcEEEeeCCCCccccccccccccCCCChHHHHHHHHHH
Q 019107 235 SIADS--CEQVVAVGINCT----SPRFIHGLILSVRKVTS--KPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKW 306 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~----~p~~~~~~l~~l~~~~~--~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (346)
+..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|-+-+. ....++++.+.+.+++.
T Consensus 93 ~la~~A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~----------tg~~l~~~~~~~La~~~ 162 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDYPLT----------LSVVMTPKVIRQIVMDS 162 (313)
T ss_dssp HHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHH----------HCCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccc----------cCcCCCHHHHHHHHHhC
Confidence 75532 247888888442 23556667777777777 99999955321 11225566555544332
Q ss_pred HHcCCeEEeec--CCCchHHHHHHHHHHc
Q 019107 307 RDAGASLFGGC--CRTTPNTIKAISRVLS 333 (346)
Q Consensus 307 ~~~G~~ivGGC--CGt~P~hI~al~~~~~ 333 (346)
-+|+|== |..+..++.++.+.+.
T Consensus 163 ----pnIvgiKd~~~~~~~~~~~~~~~~~ 187 (313)
T 3dz1_A 163 ----ASCVMLKHEDWPGLEKITTLRGFQK 187 (313)
T ss_dssp ----SSEEEEEECCSSCHHHHHHHHHHHH
T ss_pred ----CCEEEEEcCCCCCHHHHHHHHHhcC
Confidence 4566521 2234677777776654
No 12
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.94 E-value=0.83 Score=43.07 Aligned_cols=137 Identities=17% Similarity=0.251 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC-C-----------------HHHHHHHHHHHHHhCCCCcEEEEEEEcC----
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP-N-----------------KLEAKAYAELLEEEGITIPAWFSFNSKD---- 220 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~-~-----------------~~E~~a~~~a~~~~~~~~pv~is~~~~~---- 220 (346)
.+...++|+++++ .|+.+++.|... + +...+.+.+++++.+ .++++.+.=..
T Consensus 38 ~~~~~~~y~~rA~----gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g--~~i~~QL~h~Gr~~~ 111 (338)
T 1z41_A 38 TPFHMAHYISRAI----GQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG--SKIGIQLAHAGRKAE 111 (338)
T ss_dssp CHHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT--CEEEEEEECCGGGCC
T ss_pred CHHHHHHHHHHHc----CCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC--CEEEEEecCCCcccC
Confidence 3678888887764 789999998541 1 123455666777766 78888885210
Q ss_pred ------------------CCcccCC-------CCHHHHHHHhhcCCCceEEEECCCC---------h-------------
Q 019107 221 ------------------GINVVSG-------DSILECASIADSCEQVVAVGINCTS---------P------------- 253 (346)
Q Consensus 221 ------------------~~~l~~G-------~~~~~av~~~~~~~~~~avGvNC~~---------p------------- 253 (346)
..+-++- +.+.++++.+.+ .+.++|=|||.+ |
T Consensus 112 ~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~-aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGsl 190 (338)
T 1z41_A 112 LEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKE-AGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSP 190 (338)
T ss_dssp CSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSH
T ss_pred CCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEeccccchHHHHccCCCcCCcCcccCcch
Confidence 0000011 123445555444 589999999864 2
Q ss_pred ----hhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 254 ----RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 254 ----~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
..+..+++.+++..+.|+++.-+... |.. ...+.+++.+.++.+.+.|+.+|-
T Consensus 191 enr~r~~~eiv~avr~~v~~pv~vris~~~--------~~~-~g~~~~~~~~~a~~l~~~Gvd~i~ 247 (338)
T 1z41_A 191 ENRYRFLREIIDEVKQVWDGPLFVRVSASD--------YTD-KGLDIADHIGFAKWMKEQGVDLID 247 (338)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEECCC--------CST-TSCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hhhHHHHHHHHHHHHHHcCCcEEEEecCcc--------cCC-CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 23466777777777889998765532 111 123456677777777777766543
No 13
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.89 E-value=0.65 Score=43.54 Aligned_cols=105 Identities=18% Similarity=0.179 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccC-----CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETI-----PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~-----~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ +++.+.+.|||.|++ -|. -+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 29 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 95 (318)
T 3qfe_A 29 LDLASQER----YYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV---------GAHSTRQV 95 (318)
T ss_dssp ECHHHHHH----HHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC---------CCSSHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCCCHHHH
Confidence 67655544 677888899998764 222 2567777788776653 3468999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-------ChhhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 234 ASIADS--CEQVVAVGINCT-------SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-------~p~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-+
T Consensus 96 i~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~ 149 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPG 149 (318)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 776532 247888888653 124555666777777899999997654
No 14
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.78 E-value=0.53 Score=43.77 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHHh-CC-CCcEEEEEEEcCCCcccCCCCHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GI-TIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~-~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
++.+.+++ .++.+.+.|||.|++ -|.. +.+|=+.+++.+.+. +. ..||++.. .+.+..+
T Consensus 25 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ 91 (301)
T 3m5v_A 25 VDEQSYAR----LIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHE 91 (301)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHH
Confidence 67655544 677777899999875 2222 567877888776663 43 58999876 3456777
Q ss_pred HHHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 233 CASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 233 av~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 92 ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCc
Confidence 7776532 257899888663 24566777778877789999999653
No 15
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.76 E-value=1.4 Score=41.24 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ .++.+.+.|||.|++ -|.. +.+|-+.+++.+.+ .+...||++.. .+.+..++
T Consensus 41 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv---------g~~st~ea 107 (314)
T 3qze_A 41 LDWDSLAK----LVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT---------GANSTREA 107 (314)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 67655544 667777899998765 2222 67787788877655 33368999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++.++. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 157 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNV 157 (314)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 775532 257888888652 2456777777887778999999965
No 16
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.66 E-value=0.41 Score=45.44 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 49 ID~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 115 (343)
T 2v9d_A 49 LDKPGTAA----LIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT---------GGTNARET 115 (343)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CSSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67655554 677778899998875 31 12667877888776653 3368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 116 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 247888888663 24566777777777788999999654
No 17
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.48 E-value=0.48 Score=44.05 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 96 (301)
T 1xky_A 30 IDFAKTTK----LVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT---------GSNNTHAS 96 (301)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC---------CCCCHHHH
Confidence 67655544 677777899999875 32 22667877888776653 3368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 258899888663 34566777777777788999999653
No 18
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.47 E-value=1.6 Score=40.43 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----ccC-CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET~-~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ .++.+++.|||.|++ |.. -+.+|=+.+++.+.+. +..+||++.... .+..++
T Consensus 22 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---------~~t~~a 88 (300)
T 3eb2_A 22 VRADVMGR----LCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS---------TSVADA 88 (300)
T ss_dssp BCHHHHHH----HHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE---------SSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC---------CCHHHH
Confidence 67655544 677778899998863 311 2677877888776663 336899998843 355666
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
++.++. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~ 140 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQ 140 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECcc
Confidence 665432 247888877552 346677777788777899999997643
No 19
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.44 E-value=0.45 Score=44.30 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ +++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 34 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~st~~a 100 (304)
T 3cpr_A 34 IDIAAGRE----VAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGV---------GTNNTRTS 100 (304)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecC---------CCCCHHHH
Confidence 67655544 677778899998875 32 22666777777776653 3368999877 44567777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 101 i~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 150 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPICLYDI 150 (304)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 776532 258898888652 2456667777777778999999976
No 20
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.44 E-value=1.1 Score=40.38 Aligned_cols=121 Identities=21% Similarity=0.150 Sum_probs=73.2
Q ss_pred HHHHHHhCCCCEE---EEccCCCHH----HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCH---HHHHHHhhcCCC
Q 019107 173 RVLILANSGADLI---AFETIPNKL----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSI---LECASIADSCEQ 242 (346)
Q Consensus 173 ~i~~l~~~gvD~i---~~ET~~~~~----E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~---~~av~~~~~~~~ 242 (346)
+++...+.|+|.+ +..--++.. +++.+++++++.+ .|+++-... ++.++.+|.+. .+++..+.. .+
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~-~G~~l~~~~~~~~~~~~a~~a~~-~G 179 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYP-RGKHIQNERDPELVAHAARLGAE-LG 179 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEE-CSTTCSCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCC-CCcccCCCCCHhHHHHHHHHHHH-cC
Confidence 4555667899999 545444443 4666777777766 888876432 23344445444 444454444 58
Q ss_pred ceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 243 VVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 243 ~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
++.|+++=. .-...++++.+..+.|+++. +|.. . .+++++.+.++++.+.|+.-+
T Consensus 180 ad~i~~~~~---~~~~~l~~i~~~~~ipvva~--GGi~--------~----~~~~~~~~~~~~~~~~Ga~gv 234 (273)
T 2qjg_A 180 ADIVKTSYT---GDIDSFRDVVKGCPAPVVVA--GGPK--------T----NTDEEFLQMIKDAMEAGAAGV 234 (273)
T ss_dssp CSEEEECCC---SSHHHHHHHHHHCSSCEEEE--CCSC--------C----SSHHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEECCC---CCHHHHHHHHHhCCCCEEEE--eCCC--------C----CCHHHHHHHHHHHHHcCCcEE
Confidence 899998832 11344555555557887663 3320 0 136778888888888888633
No 21
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.41 E-value=1.6 Score=40.22 Aligned_cols=144 Identities=10% Similarity=0.028 Sum_probs=90.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ +++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 21 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 87 (294)
T 3b4u_A 21 VDIDAMIA----HARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDA 87 (294)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHH
Confidence 67665554 677778899999875 31 12677888888887764 3368999887 34566777
Q ss_pred HHHhhc--CCCceEEEECCC---C---hhhHHHHHHHHhhhc---CCcEEEeeCCCCccccccccccccCCCChHHHHHH
Q 019107 234 ASIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVT---SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSY 302 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~---~---p~~~~~~l~~l~~~~---~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~ 302 (346)
++..+. ..+++++.+-.- . .+.+....+.+.+.+ +.|+++|-+-+. ....++++.+.+.
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~----------tg~~l~~~~~~~L 157 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSV----------TMVTLSVELVGRL 157 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHH----------HSCCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcch----------hCcCCCHHHHHHH
Confidence 765532 258899888763 2 245666667777777 899999965421 1122556666665
Q ss_pred HHHHHHcCCe-EEee--cCCCchHHHHHHHHHH
Q 019107 303 IGKWRDAGAS-LFGG--CCRTTPNTIKAISRVL 332 (346)
Q Consensus 303 ~~~~~~~G~~-ivGG--CCGt~P~hI~al~~~~ 332 (346)
+++. -+ |+|= +|| +..++.++.+..
T Consensus 158 a~~~----pn~ivgiKds~g-d~~~~~~~~~~~ 185 (294)
T 3b4u_A 158 KAAF----PGIVTGVKDSSG-NWSHTERLLKEH 185 (294)
T ss_dssp HHHC----TTTEEEEEECCC-CHHHHHHHHHHH
T ss_pred HHhC----CCcEEEEEECCC-CHHHHHHHHHhC
Confidence 4322 34 5552 332 456666666543
No 22
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.34 E-value=0.52 Score=43.57 Aligned_cols=103 Identities=18% Similarity=0.129 Sum_probs=71.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (292)
T 2ojp_A 19 VCRASLKK----LIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT---------GANATAEA 85 (292)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCccHHHH
Confidence 67665554 666777789999875 32 22667877888776653 3368999877 34567788
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNV 135 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 776543 257899888663 2456677777777778899999965
No 23
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.29 E-value=0.45 Score=44.04 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc-cCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE-TIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E-T~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.++ ++++.+.+.|||.|++- |.. +.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 20 iD~~~l~----~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 86 (292)
T 3daq_A 20 VNLEALK----AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT---------GTNDTEKS 86 (292)
T ss_dssp ECHHHHH----HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSCHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 6665544 46777888999998742 222 567877788776653 3368999876 34466777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 87 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P 137 (292)
T 3daq_A 87 IQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVP 137 (292)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 765532 247888887652 23566677777777779999999653
No 24
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=94.20 E-value=0.88 Score=44.24 Aligned_cols=155 Identities=17% Similarity=0.165 Sum_probs=96.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCC---------CH--------HH-HHHHHHHHHHhCCCCcEEEEEEEcCCCc
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIP---------NK--------LE-AKAYAELLEEEGITIPAWFSFNSKDGIN 223 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~---------~~--------~E-~~a~~~a~~~~~~~~pv~is~~~~~~~~ 223 (346)
.++-+++.|++ +.++|+|+|.=-|+. .+ .| .+.+++++++.....|++|.-++-+.+.
T Consensus 52 ~Pe~V~~iH~~----Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~~~VAGsIGP~g~ 127 (406)
T 1lt8_A 52 HPEAVRQLHRE----FLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVSQTPS 127 (406)
T ss_dssp CHHHHHHHHHH----HHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEECCCHH
T ss_pred CHHHHHHHHHH----HHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCCccc
Confidence 45667777875 556999988544443 11 12 3344555665422346788888866665
Q ss_pred ccCCCCHHHHHHHh-------hcCCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCC
Q 019107 224 VVSGDSILECASIA-------DSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVR 295 (346)
Q Consensus 224 l~~G~~~~~av~~~-------~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~ 295 (346)
.....+++++.+.. .. .++|.+.+.-. +...+..+++.+++ ...|+++.-.-. -++ . .. +.+
T Consensus 128 ~l~~~s~eel~~~~~eqi~~L~~-~GvDlll~ETi~~~~Eakaa~~a~~~-~~lPv~iS~T~~--~~G---~-l~--G~~ 197 (406)
T 1lt8_A 128 YLSAKSETEVKKVFLQQLEVFMK-KNVDFLIAEYFEHVEEAVWAVETLIA-SGKPVAATMAIG--PEG---D-LH--GVP 197 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHH-HTCSEEEECCCSCHHHHHHHHHHHGG-GTSCEEEEECCB--TTB---C-TT--CCC
T ss_pred ccCCCCHHHHHHHHHHHHHHHhh-CCCCEEEEcccCCHHHHHHHHHHHHH-hCCcEEEEEEEC--CCC---C-cC--CCc
Confidence 55666777655432 22 47999999986 56777777777665 468877653221 011 1 11 233
Q ss_pred hHHHHHHHHHHHHcCCeEEeecCCCchHHHHHHHHHHc
Q 019107 296 DEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLS 333 (346)
Q Consensus 296 ~~~~~~~~~~~~~~G~~ivGGCCGt~P~hI~al~~~~~ 333 (346)
..+++. ...+.|+..||=-|.++|+++..+-+.++
T Consensus 198 ~~~~~~---~l~~~~~~avGvNC~~gP~~~~~~l~~l~ 232 (406)
T 1lt8_A 198 PGEAAV---RLVKAGASIIGVNCHFDPTISLKTVKLMK 232 (406)
T ss_dssp HHHHHH---HHHTTTCSEEEEESSSCHHHHHHHHHHHH
T ss_pred HHHHHH---HhhcCCCCEEEecCCCCHHHHHHHHHHHH
Confidence 444444 44557899999999999998877666655
No 25
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.09 E-value=0.45 Score=44.16 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=72.0
Q ss_pred HHHHhCCCCEEEEccCCCHH-------------------------HHHHHHHHHHHh-C-CCCcEEEEEEEcCCCcccCC
Q 019107 175 LILANSGADLIAFETIPNKL-------------------------EAKAYAELLEEE-G-ITIPAWFSFNSKDGINVVSG 227 (346)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~~~-------------------------E~~a~~~a~~~~-~-~~~pv~is~~~~~~~~l~~G 227 (346)
+.+.+.|+.++..+|++... .....++.+++. . .+.|+++++. |
T Consensus 32 ~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~~p~~~~i~---------g 102 (314)
T 2e6f_A 32 RCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSKKPLFLSIS---------G 102 (314)
T ss_dssp HHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTTCCEEEEEC---------C
T ss_pred HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCCCcEEEEeC---------C
Confidence 34567899998887754221 122233333332 1 2589999983 4
Q ss_pred CCHH---HHHHHhhcCCCce---EEEECCCC------------hhhHHHHHHHHhhhcCCcEEEeeCCCCcccccccccc
Q 019107 228 DSIL---ECASIADSCEQVV---AVGINCTS------------PRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWV 289 (346)
Q Consensus 228 ~~~~---~av~~~~~~~~~~---avGvNC~~------------p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~ 289 (346)
.++. ++++.+.+ .+++ +|=+|+++ ++.+..+++.+++..+.|+++.-..+
T Consensus 103 ~~~~~~~~~a~~~~~-~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~----------- 170 (314)
T 2e6f_A 103 LSVEENVAMVRRLAP-VAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY----------- 170 (314)
T ss_dssp SSHHHHHHHHHHHHH-HHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC-----------
T ss_pred CCHHHHHHHHHHHHH-hCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC-----------
Confidence 4444 45555544 3578 88898863 44567788888877788998864321
Q ss_pred ccCCCChHHHHHHHHHHHHcC-CeEE
Q 019107 290 ESTGVRDEDFVSYIGKWRDAG-ASLF 314 (346)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~G-~~iv 314 (346)
.+.+++.+.++...+.| +..|
T Consensus 171 ----~~~~~~~~~a~~~~~aG~~d~i 192 (314)
T 2e6f_A 171 ----FDIAHFDTAAAVLNEFPLVKFV 192 (314)
T ss_dssp ----CCHHHHHHHHHHHHTCTTEEEE
T ss_pred ----CCHHHHHHHHHHHHhcCCceEE
Confidence 23567777788888888 7655
No 26
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=94.06 E-value=0.45 Score=44.34 Aligned_cols=103 Identities=15% Similarity=0.100 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ +++.+.+.|||.|++ -|.. +.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 33 iD~~~l~~----lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 99 (304)
T 3l21_A 33 LDTATAAR----LANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA---------GTYDTAHS 99 (304)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSCHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 67655544 677778899998764 2322 57787888877666 33368999887 34456777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 100 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 149 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDI 149 (304)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 765532 247888888763 2466777778888778999999965
No 27
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.02 E-value=0.64 Score=43.11 Aligned_cols=103 Identities=18% Similarity=0.153 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ +++.+.+.|||.|++ -|.. +.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 25 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 91 (297)
T 3flu_A 25 IHYEQLRD----LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT---------GANNTVEA 91 (297)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 67655544 677778899998764 3332 67787888877665 33368999877 34567777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 92 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~ 141 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNV 141 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 775532 257888887652 2355667777887778999999965
No 28
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=93.98 E-value=0.53 Score=44.20 Aligned_cols=122 Identities=14% Similarity=0.181 Sum_probs=73.1
Q ss_pred HHHhCCCCEEEEccCCCH---------------------------HHHHHHHHHHHHhCCCCcEEEEEEEcCCCccc-CC
Q 019107 176 ILANSGADLIAFETIPNK---------------------------LEAKAYAELLEEEGITIPAWFSFNSKDGINVV-SG 227 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~---------------------------~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~-~G 227 (346)
.+.+.|+.++..||++-. ...+..++.+++.+.+.|+.+++....+.... .-
T Consensus 73 ~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~ 152 (336)
T 1f76_A 73 ALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGK 152 (336)
T ss_dssp HHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTH
T ss_pred HHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccH
Confidence 355689999988887421 11244455555543346898888533211110 01
Q ss_pred CCHHHHHHHhhcCCCceEEEECCCChh-----------hHHHHHHHHhhhc---------CCcEEEeeCCCCcccccccc
Q 019107 228 DSILECASIADSCEQVVAVGINCTSPR-----------FIHGLILSVRKVT---------SKPVIIYPNSGETYNAELKK 287 (346)
Q Consensus 228 ~~~~~av~~~~~~~~~~avGvNC~~p~-----------~~~~~l~~l~~~~---------~~pl~vypN~g~~~~~~~~~ 287 (346)
+.+.++++.+.. ++++|-+|+.+|. .+..+++.+++.. +.|+++.-+.+
T Consensus 153 ~~~~~aa~~~~~--g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~--------- 221 (336)
T 1f76_A 153 DDYLICMEKIYA--YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD--------- 221 (336)
T ss_dssp HHHHHHHHHHGG--GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC---------
T ss_pred HHHHHHHHHHhc--cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC---------
Confidence 234445554432 6889999986542 2346677777665 78999874321
Q ss_pred ccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 288 WVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
.+.++..+.++...+.|+..|
T Consensus 222 ------~~~~~~~~~a~~l~~~Gvd~i 242 (336)
T 1f76_A 222 ------LSEEELIQVADSLVRHNIDGV 242 (336)
T ss_dssp ------CCHHHHHHHHHHHHHTTCSEE
T ss_pred ------CCHHHHHHHHHHHHHcCCcEE
Confidence 235677788888888887755
No 29
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=93.95 E-value=0.48 Score=44.36 Aligned_cols=102 Identities=15% Similarity=0.077 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc-cC-----CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE-TI-----PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E-T~-----~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ .++.+.+.|||.|++- |. -+.+|=+.+++.+.+. +...||++... .+..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg----------~~t~~a 95 (316)
T 3e96_A 30 IDWHHYKE----TVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG----------YATSTA 95 (316)
T ss_dssp BCHHHHHH----HHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC----------SSHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC----------cCHHHH
Confidence 67655544 6777888999998742 21 1577777788776653 33689998872 255677
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 665432 247888888642 3466777777887778899999975
No 30
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.94 E-value=0.54 Score=44.43 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+++.|||.|++ |. .-+.+|=+.+++.+.+. +...||++.. .+.+..++
T Consensus 52 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 118 (332)
T 2r8w_A 52 VDIEAFSA----LIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI---------GALRTDEA 118 (332)
T ss_dssp BCHHHHHH----HHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67765554 667777789999875 32 12667877888776653 3368999887 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 119 i~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~ 168 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNN 168 (332)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 765532 247899888663 2356667777777778899999965
No 31
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=93.85 E-value=0.69 Score=43.29 Aligned_cols=105 Identities=17% Similarity=0.113 Sum_probs=72.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc-c-----CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE-T-----IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E-T-----~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++- | .-+.+|=+.+++.+.+ .+...||++.. .+ +..++
T Consensus 30 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv---------g~-st~~a 95 (314)
T 3d0c_A 30 IDWKGLDD----NVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI---------GY-SVDTA 95 (314)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE---------CS-SHHHH
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC---------Cc-CHHHH
Confidence 67665554 6777788999998742 2 1266777777777665 33368999887 34 66777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCCCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSGE 279 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~g~ 279 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-..|.
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~ 148 (314)
T 3d0c_A 96 IELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH 148 (314)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 765532 258899988763 2356667777777778899999974444
No 32
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.75 E-value=0.59 Score=43.37 Aligned_cols=103 Identities=19% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 18 iD~~~l~~----lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~a 84 (297)
T 2rfg_A 18 VDEKALAG----LVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA---------GSNNPVEA 84 (297)
T ss_dssp ECHHHHHH----HHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc---------CCCCHHHH
Confidence 67655544 677778899999874 32 2366777788877665 33368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~ 134 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNI 134 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 765532 247899988763 2356667777777778999999965
No 33
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.68 E-value=0.5 Score=43.66 Aligned_cols=104 Identities=16% Similarity=0.171 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.++ ..++.+.+.|||.|++ |. .-+.+|-+.+++.+.+ .+...||++.. .+.+..++
T Consensus 19 iD~~~l~----~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv---------g~~~t~~a 85 (291)
T 3a5f_A 19 VDFDKLS----ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT---------GSNNTAAS 85 (291)
T ss_dssp BCHHHHH----HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CcccHHHH
Confidence 5665554 4677778899999875 32 2366777778877665 33368999877 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVP 136 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECH
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 765532 258899888663 23445555566666678999999753
No 34
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=93.55 E-value=0.63 Score=42.97 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ +++.+.+.|||.|++ -|.. +.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 19 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 85 (291)
T 3tak_A 19 VDWKSLEK----LVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT---------GANSTREA 85 (291)
T ss_dssp BCHHHHHH----HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC---------CCCCHHHH
Confidence 67655554 677777899997763 3433 678888888877663 3368999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNV 135 (291)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 775532 247888887652 2356677777887778999999965
No 35
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.51 E-value=4.4 Score=37.05 Aligned_cols=89 Identities=16% Similarity=0.242 Sum_probs=52.6
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE----E--
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV----G-- 247 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av----G-- 247 (346)
++.+.++|||.+++=.+|. +|.....+++++.+ +..+.-++ .-++.+.+....+...+...+ |
T Consensus 118 ~~~~~~aGvdGvIipDlp~-ee~~~~~~~~~~~g--l~~I~lva--------p~t~~eri~~i~~~~~gfiY~vs~~GvT 186 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADVPT-NESQPFVAAAEKFG--IQPIFIAP--------PTASDETLRAVAQLGKGYTYLLSRAGVT 186 (271)
T ss_dssp HHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT--CEEEEEEC--------TTCCHHHHHHHHHHCCSCEEECCCC---
T ss_pred HHHHHHCCCCEEEECCCCH-HHHHHHHHHHHHcC--CeEEEEEC--------CCCCHHHHHHHHHHCCCeEEEEeccCCC
Confidence 5567779999999877765 67888888899877 54332221 112223333333332333222 1
Q ss_pred -ECCCChhhHHHHHHHHhhhcCCcEEE
Q 019107 248 -INCTSPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 248 -vNC~~p~~~~~~l~~l~~~~~~pl~v 273 (346)
..-.-+..+..+++++++.++.|+++
T Consensus 187 G~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 187 GAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp -----CCHHHHHHHHHHHHTTCCCEEE
T ss_pred CcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 11112456788899999888899877
No 36
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=93.45 E-value=0.7 Score=42.71 Aligned_cols=104 Identities=12% Similarity=0.041 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHHHHh-CCCCEEEE-----cc-CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHH
Q 019107 161 VSLETLKEFHRRRVLILAN-SGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~-~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
++.+.+++ .++.+.+ .|||.|++ |. .-+.+|=+.+++.+.+ .+...||++.. .+.+..+
T Consensus 21 iD~~~l~~----lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv---------g~~~t~~ 87 (293)
T 1f6k_A 21 INEKGLRQ----IIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQV---------GSVNLKE 87 (293)
T ss_dssp BCHHHHHH----HHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEC---------CCSCHHH
T ss_pred cCHHHHHH----HHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHH
Confidence 67655544 6777888 99999875 31 1266677777777665 33368999877 3456677
Q ss_pred HHHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 233 CASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 233 av~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
+++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 88 ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P 139 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMIVYSIP 139 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEEEEECH
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEECc
Confidence 7765532 247888888653 23556666777777778999999753
No 37
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=93.44 E-value=0.69 Score=43.11 Aligned_cols=103 Identities=12% Similarity=0.013 Sum_probs=70.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc-cC-----CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE-TI-----PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E-T~-----~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.++ +.++.+.+.|||.|++- |- -+.+|=+.+++.+.+. +..+||++.. .+.+..++
T Consensus 32 iD~~~l~----~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~a 98 (307)
T 3s5o_A 32 VDYGKLE----ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS---------GCESTQAT 98 (307)
T ss_dssp BCHHHHH----HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec---------CCCCHHHH
Confidence 6765544 46777888999988742 21 2577878888887764 3368999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-------ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-------SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-------~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+
T Consensus 99 i~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~ 150 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSV 150 (307)
T ss_dssp HHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeC
Confidence 765432 258899888542 2245666677777778999999965
No 38
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=93.34 E-value=2.8 Score=40.99 Aligned_cols=134 Identities=13% Similarity=0.134 Sum_probs=90.0
Q ss_pred HHHHHHHhCCCCEEEEccCC---------------CHHHH----HHHHHHHHHhCCCCcEEEEEEEcCCCc---------
Q 019107 172 RRVLILANSGADLIAFETIP---------------NKLEA----KAYAELLEEEGITIPAWFSFNSKDGIN--------- 223 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~---------------~~~E~----~a~~~a~~~~~~~~pv~is~~~~~~~~--------- 223 (346)
+.++.+.++||-.+-||-.. ..+|. ++++.+.+..+ .|++|.-..+...-
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g--~d~~IiARTDa~~a~l~~s~~d~ 248 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMG--TPTVLVARTDAEAADLITSDIDD 248 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCCT
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEEcCccccccccccccc
Confidence 46778889999999999654 24444 44444444445 67777776654221
Q ss_pred ----------ccCC-----CCHHHHHHHhhc-CCCceEEEECCC--ChhhHHHHHHHHhhhcCCcEEEeeCCCCcccccc
Q 019107 224 ----------VVSG-----DSILECASIADS-CEQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAEL 285 (346)
Q Consensus 224 ----------l~~G-----~~~~~av~~~~~-~~~~~avGvNC~--~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~ 285 (346)
+..| ..+.++++.+.. ..++++|-+-.. .++.+..+.+.+......++++|+.+..
T Consensus 249 ~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPs------ 322 (439)
T 3i4e_A 249 NDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPS------ 322 (439)
T ss_dssp TTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccCcccccccccCCHHHHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHhcccCCceEEeeCCCCC------
Confidence 1111 458999887753 137888888543 5788888888887655566788877643
Q ss_pred ccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 286 KKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
-.|... ++++++..+..++.+.|++++=
T Consensus 323 fnw~~~--~~~~~~~~f~~eL~~lGv~~v~ 350 (439)
T 3i4e_A 323 FNWKKN--LDDATIAKFQKELGAMGYKFQF 350 (439)
T ss_dssp SCHHHH--SCHHHHHTHHHHHHHHTCCEEE
T ss_pred CcCccc--CCHHHHHHHHHHHHHcCCeEEE
Confidence 245433 5678888888899999988764
No 39
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=93.27 E-value=0.75 Score=42.78 Aligned_cols=103 Identities=17% Similarity=0.101 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+ .+...||++.. .+.+..++
T Consensus 29 iD~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 95 (303)
T 2wkj_A 29 LDKASLRR----LVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHV---------GCVSTAES 95 (303)
T ss_dssp BCHHHHHH----HHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec---------CCCCHHHH
Confidence 67655544 677777899999875 32 2266787788877665 33368999876 34466777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcC-CcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTS-KPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~-~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+.++ .|+++|-+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiilYn~ 146 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNI 146 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEEEeC
Confidence 765532 247888888663 24566677777777777 99999965
No 40
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=93.22 E-value=0.63 Score=43.05 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=55.0
Q ss_pred CCcEEEEEEEcCCCcccCCCCH---HHHHHHhhcCCCce-EEEECCC------------ChhhHHHHHHHHhhhcCCcEE
Q 019107 209 TIPAWFSFNSKDGINVVSGDSI---LECASIADSCEQVV-AVGINCT------------SPRFIHGLILSVRKVTSKPVI 272 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~---~~av~~~~~~~~~~-avGvNC~------------~p~~~~~~l~~l~~~~~~pl~ 272 (346)
+.|+++++. |.++ .++++.+.. .+++ +|-+|++ .|+.+..+++.+++..+.|++
T Consensus 93 ~~p~~~~i~---------g~~~~~~~~~a~~~~~-~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~ 162 (311)
T 1jub_A 93 EGPIFFSIA---------GMSAAENIAMLKKIQE-SDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLG 162 (311)
T ss_dssp SSCCEEEEC---------CSSHHHHHHHHHHHHH-SCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEE
T ss_pred CCCEEEEcC---------CCCHHHHHHHHHHHHh-cCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEE
Confidence 589999983 4444 445555544 4678 8888885 345667888888887788998
Q ss_pred EeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 273 IYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 273 vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+.-..+ .+.+++.+.++...+.|+..|
T Consensus 163 vKi~~~---------------~~~~~~~~~a~~~~~~G~d~i 189 (311)
T 1jub_A 163 VKLPPY---------------FDLVHFDIMAEILNQFPLTYV 189 (311)
T ss_dssp EEECCC---------------CSHHHHHHHHHHHTTSCCCEE
T ss_pred EEECCC---------------CCHHHHHHHHHHHHHcCCcEE
Confidence 864321 135667777777778887653
No 41
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=93.13 E-value=2.1 Score=41.85 Aligned_cols=134 Identities=15% Similarity=0.148 Sum_probs=89.8
Q ss_pred HHHHHHHhCCCCEEEEccCC---------------CHHHHH----HHHHHHHHhCCCCcEEEEEEEcCCC----------
Q 019107 172 RRVLILANSGADLIAFETIP---------------NKLEAK----AYAELLEEEGITIPAWFSFNSKDGI---------- 222 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~---------------~~~E~~----a~~~a~~~~~~~~pv~is~~~~~~~---------- 222 (346)
+.++.+.++||-.+.||-.. +.+|+. +++++.+..+ .+++|.-..+...
T Consensus 171 ~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~--~d~~IiARTDa~aa~l~~s~~d~ 248 (435)
T 3lg3_A 171 ELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLG--VPTLLIARTDADAADLLTSDCDP 248 (435)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCCG
T ss_pred HHHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEEcCCcccccccccccc
Confidence 46788899999999999653 244544 4444444444 6777777666421
Q ss_pred ---cccCC-----------CCHHHHHHHhhcC-CCceEEEECCC--ChhhHHHHHHHHhhhcCCcEEEeeCCCCcccccc
Q 019107 223 ---NVVSG-----------DSILECASIADSC-EQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAEL 285 (346)
Q Consensus 223 ---~l~~G-----------~~~~~av~~~~~~-~~~~avGvNC~--~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~ 285 (346)
....| ..+.++++.+... .++++|-+-.. .++.+..+.+.+.......+++|+++..
T Consensus 249 rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPs------ 322 (435)
T 3lg3_A 249 YDREFITGDRTAEGFFRTRAGIEQAISRGLAYAPYADLVWCETSTPDLALAKRFADAVHAQFPGKLLAYNCSPS------ 322 (435)
T ss_dssp GGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCEEEEECCSS------
T ss_pred ccchhhcccccccccccccCCHHHHHHHHHHHHccCCEEEecCCCCCHHHHHHHHHHhccccCCeEEEeCCCCC------
Confidence 11222 5688998876431 27888888553 5677888888886544556778877642
Q ss_pred ccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 286 KKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
-.|... ++++++..+..++.+.|++++=
T Consensus 323 fnw~~~--~~d~~~~~f~~eLa~lG~~~v~ 350 (435)
T 3lg3_A 323 FNWKKN--LTDQQIASFQDELSAMGYKYQF 350 (435)
T ss_dssp SCHHHH--SCHHHHHHHHHHHHHTTEEEEE
T ss_pred cccccc--CCHHHHHHHHHHHHHcCCcEEE
Confidence 245433 6788899999999999988765
No 42
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.08 E-value=0.9 Score=43.27 Aligned_cols=144 Identities=15% Similarity=0.198 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcC
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~ 240 (346)
.+.+... .|+..|.++|+|++=+ |+|+.++++++-+.-++. ++|+++-+.|+ ...+...++
T Consensus 43 ~D~~atv----~Qi~~l~~aG~diVRv-avp~~~~a~al~~I~~~~--~vPlvaDiHf~----------~~lal~a~e-- 103 (366)
T 3noy_A 43 HDVEATL----NQIKRLYEAGCEIVRV-AVPHKEDVEALEEIVKKS--PMPVIADIHFA----------PSYAFLSME-- 103 (366)
T ss_dssp TCHHHHH----HHHHHHHHTTCCEEEE-ECCSHHHHHHHHHHHHHC--SSCEEEECCSC----------HHHHHHHHH--
T ss_pred cCHHHHH----HHHHHHHHcCCCEEEe-CCCChHHHHHHHHHHhcC--CCCEEEeCCCC----------HHHHHHHHH--
Confidence 3554444 4899999999999986 899988776655544443 59999887662 233444444
Q ss_pred CCceEEEECCC---ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHH----HHcCC-e
Q 019107 241 EQVVAVGINCT---SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKW----RDAGA-S 312 (346)
Q Consensus 241 ~~~~avGvNC~---~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~-~ 312 (346)
.+++.+=+|=. ..+.+..+++..+++ ..|+-+=-|+|.+-..-...|-. .+|+.+.+.+.++ .+.|- +
T Consensus 104 ~G~dklRINPGNig~~~~~~~vv~~ak~~-~~piRIGvN~GSL~~~ll~~yg~---~~~eamVeSAl~~~~~~e~~gf~~ 179 (366)
T 3noy_A 104 KGVHGIRINPGNIGKEEIVREIVEEAKRR-GVAVRIGVNSGSLEKDLLEKYGY---PSAEALAESALRWSEKFEKWGFTN 179 (366)
T ss_dssp TTCSEEEECHHHHSCHHHHHHHHHHHHHH-TCEEEEEEEGGGCCHHHHHHHSS---CCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hCCCeEEECCcccCchhHHHHHHHHHHHc-CCCEEEecCCcCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHhCCCCe
Confidence 36788888864 346667777777654 88988888998653221122321 3467666655443 34563 4
Q ss_pred EEeecCCCchH-HHHH
Q 019107 313 LFGGCCRTTPN-TIKA 327 (346)
Q Consensus 313 ivGGCCGt~P~-hI~a 327 (346)
|+=-|=.+++. -|++
T Consensus 180 iviS~K~S~v~~~i~a 195 (366)
T 3noy_A 180 YKVSIKGSDVLQNVRA 195 (366)
T ss_dssp EEEEEECSSHHHHHHH
T ss_pred EEEeeecCChHHHHHH
Confidence 55434444443 3443
No 43
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=93.06 E-value=1.2 Score=41.64 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=53.3
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
+|++++.++|+|.|++|-+++.+|++.+++.+. ++|+++.+.. .+..+ ..+..+.. + .++.-|-..++
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~----~~Pv~~n~~~--~g~~p-~~t~~eL~----~-lGv~~v~~~~~ 249 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA----PWPLLLNSVE--NGHSP-LITVEEAK----A-MGFRIMIFSFA 249 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT----TSCBEEEEET--TSSSC-CCCHHHHH----H-HTCSEEEEETT
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc----CCceeEEeec--CCCCC-CCCHHHHH----H-cCCeEEEEChH
Confidence 488899999999999999999999999888775 3888877653 22211 22333332 2 24444444443
Q ss_pred C----hhhHHHHHHHHhhh
Q 019107 252 S----PRFIHGLILSVRKV 266 (346)
Q Consensus 252 ~----p~~~~~~l~~l~~~ 266 (346)
. ...+...++.+.+.
T Consensus 250 ~~raa~~a~~~~~~~l~~~ 268 (307)
T 3lye_A 250 TLAPAYAAIRETLVRLRDH 268 (307)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 2 34566666666554
No 44
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=93.01 E-value=2 Score=40.02 Aligned_cols=143 Identities=11% Similarity=0.060 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEE-EccCC-----CHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIA-FETIP-----NKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~-~ET~~-----~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+ +++++.+.+.|||.|+ +-|.. +.+|-+.+++.+.+. +...||++.. .+.+..++
T Consensus 25 iD~~~l----~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv---------g~~~t~~a 91 (311)
T 3h5d_A 25 INFDAI----PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV---------GTNDTRDS 91 (311)
T ss_dssp BCTTHH----HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC---------CCSSHHHH
T ss_pred cCHHHH----HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC---------CCcCHHHH
Confidence 455444 4467778889999765 33432 677888888887764 3368999876 34466777
Q ss_pred HHHhhc--CCCc-eEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHH
Q 019107 234 ASIADS--CEQV-VAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGK 305 (346)
Q Consensus 234 v~~~~~--~~~~-~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (346)
++..+. ..++ +++.+-.- +.+.+....+.+.+.++.|+++|-+-+. ....++++.+.+.++
T Consensus 92 i~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~----------tg~~l~~~~~~~La~- 160 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGR----------VVVELTPETMLRLAD- 160 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHH----------HSSCCCHHHHHHHHT-
T ss_pred HHHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccc----------cCCCCCHHHHHHHhc-
Confidence 765532 1354 88887662 2356667777777778999999965321 112255666665442
Q ss_pred HHHcCCeEEeecCCCchHHHHHHHHH
Q 019107 306 WRDAGASLFGGCCRTTPNTIKAISRV 331 (346)
Q Consensus 306 ~~~~G~~ivGGCCGt~P~hI~al~~~ 331 (346)
. -+|+|==-.++..++.++.+.
T Consensus 161 ---~-pnIvgiKdssd~~~~~~~~~~ 182 (311)
T 3h5d_A 161 ---H-PNIIGVKECTSLANMAYLIEH 182 (311)
T ss_dssp ---S-TTEEEEEECSCHHHHHHHHHH
T ss_pred ---C-CCEEEEEeCCCHHHHHHHHHH
Confidence 1 345543111156666666554
No 45
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=92.89 E-value=2.9 Score=40.87 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=88.5
Q ss_pred HHHHHHHhCCCCEEEEccCCC---------------HHHH----HHHHHHHHHhCCCCcEEEEEEEcCCC----------
Q 019107 172 RRVLILANSGADLIAFETIPN---------------KLEA----KAYAELLEEEGITIPAWFSFNSKDGI---------- 222 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~---------------~~E~----~a~~~a~~~~~~~~pv~is~~~~~~~---------- 222 (346)
+.++.+.++||-.+-||-... .+|. ++++++.+..+ .+++|.-..+...
T Consensus 164 rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g--~d~vIiARTDA~~a~l~~s~~d~ 241 (433)
T 3eol_A 164 EIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMG--TPTLIVARTDAEAAKLLTSDIDE 241 (433)
T ss_dssp HHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECTTTCCEESCCCST
T ss_pred HHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCEEEEEEcCCccccccccCccc
Confidence 467888999999999997543 3444 44444444444 5677777665421
Q ss_pred -----------cccCC-----CCHHHHHHHhhcC-CCceEEEECCC--ChhhHHHHHHHHhhhcCCcEEEeeCCCCcccc
Q 019107 223 -----------NVVSG-----DSILECASIADSC-EQVVAVGINCT--SPRFIHGLILSVRKVTSKPVIIYPNSGETYNA 283 (346)
Q Consensus 223 -----------~l~~G-----~~~~~av~~~~~~-~~~~avGvNC~--~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~ 283 (346)
++..| ..++++++.+... .++++|=+-.. .++.+..+.+.+......++++|+++..
T Consensus 242 rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~GAD~If~e~~~~~~eei~~f~~~v~~~~P~~~L~~~~sPs---- 317 (433)
T 3eol_A 242 RDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAPYCDLIWMETSKPDLAQARRFAEAVHKAHPGKLLAYNCSPS---- 317 (433)
T ss_dssp TTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHHHSTTCCEEEECCSS----
T ss_pred ccccceeccCcccccccccccCCHHHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHHhcccCCCcccccCCCCC----
Confidence 11111 5689998876531 27888888654 5688888888887544566778876642
Q ss_pred ccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 284 ELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
-.|... ++++++..+..++.+.|++++=
T Consensus 318 --fnw~~~--~~~~~~~~f~~eLa~lGv~~v~ 345 (433)
T 3eol_A 318 --FNWKKN--LDDATIAKFQRELGAMGYKFQF 345 (433)
T ss_dssp --SCHHHH--SCHHHHHHHHHHHHHHTEEEEE
T ss_pred --Cccccc--CChhHHhHHHHHHHHcCCeEEE
Confidence 245432 5678888888888889988764
No 46
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=92.56 E-value=1.7 Score=39.94 Aligned_cols=102 Identities=16% Similarity=0.206 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGv---------g~~~t~~ai 81 (288)
T 2nuw_A 17 VNVDALKT----HAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQV---------GSLNLNDVM 81 (288)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEee---------CCCCHHHHH
Confidence 67655544 677778899999875 31 12677888888888775423 55554 345667777
Q ss_pred HHhhc--CCCceEEEECCC------ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 235 SIADS--CEQVVAVGINCT------SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~------~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
+..+. ..+++++.+-.- +.+.+....+.+.+.++.|+++|-+-
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp HHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEECc
Confidence 65532 358899988652 22556666677777788999999753
No 47
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=92.32 E-value=4.7 Score=37.95 Aligned_cols=134 Identities=19% Similarity=0.296 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEccCC------------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC---
Q 019107 164 ETLKEFHRRRVLILANSGADLIAFETIP------------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGI--- 222 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD~i~~ET~~------------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~--- 222 (346)
+...++|.++++ .|+-+|+.|... .+...+.+.+++++.| .++++.+.= ...
T Consensus 39 ~~~~~~y~~rA~----gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G--~~i~~QL~H-~Gr~~~ 111 (340)
T 3gr7_A 39 TWHKIHYPARAV----GQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHG--AAIGIQLAH-AGRKSQ 111 (340)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTT--CEEEEEEEC-CGGGCC
T ss_pred HHHHHHHHHHhc----CCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCC--CeEEEEecc-CCCccC
Confidence 678889988776 678888877321 2345666778888876 677777742 110
Q ss_pred --------------------cccCCCC-------HHHHHHHhhcCCCceEEEECCCC---------h-------------
Q 019107 223 --------------------NVVSGDS-------ILECASIADSCEQVVAVGINCTS---------P------------- 253 (346)
Q Consensus 223 --------------------~l~~G~~-------~~~av~~~~~~~~~~avGvNC~~---------p------------- 253 (346)
+-++-+. +.++++.+.+ .+.++|=|||.+ |
T Consensus 112 ~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGsl 190 (340)
T 3gr7_A 112 VPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKE-AGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSP 190 (340)
T ss_dssp SSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSH
T ss_pred CCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHcCCCccCcCCCcccCCH
Confidence 0011111 2233333333 489999999874 3
Q ss_pred ----hhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 254 ----RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 254 ----~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
..+..+++.+++..+.|+++.-+.... .+ ...+.+++.+.++.+.+.|+.+|
T Consensus 191 enR~r~~~eiv~avr~~v~~pv~vRls~~~~--------~~-~g~~~~~~~~la~~L~~~Gvd~i 246 (340)
T 3gr7_A 191 ENRYRFLGEVIDAVREVWDGPLFVRISASDY--------HP-DGLTAKDYVPYAKRMKEQGVDLV 246 (340)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEEESCCC--------ST-TSCCGGGHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEeccccc--------cC-CCCCHHHHHHHHHHHHHcCCCEE
Confidence 134567777777778899987665421 11 11234566667777777776554
No 48
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=92.24 E-value=2.6 Score=38.65 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=68.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----cc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----ET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+++ .++.+.+.|||.|++ |. .-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 16 iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--vi~Gv---------g~~~t~~ai 80 (286)
T 2r91_A 16 LDPELFAN----HVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR--VIVQV---------ASLNADEAI 80 (286)
T ss_dssp ECHHHHHH----HHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS--EEEEC---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--EEEee---------CCCCHHHHH
Confidence 67655544 677778899999875 31 12677888888888776423 55554 345667777
Q ss_pred HHhhc--CCCceEEEECCC---C---hhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 235 SIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~---~---p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
+..+. ..+++++.+-.- . .+.+....+.+.+.++.|+++|-+-
T Consensus 81 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P 131 (286)
T 2r91_A 81 ALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVFLYNYP 131 (286)
T ss_dssp HHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred HHHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCh
Confidence 65532 258899888653 2 2456666677777788999999763
No 49
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=91.93 E-value=4.4 Score=37.15 Aligned_cols=100 Identities=21% Similarity=0.164 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC------cccCCC--CHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI------NVVSGD--SILEC 233 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~------~l~~G~--~~~~a 233 (346)
+.++..+. +..|.++|++.+-+|-- .|....++++.+.+ .||+-.+-+.+.. ...-|. ...++
T Consensus 93 s~~~a~~n----a~rl~kaGa~aVklEdg---~e~~~~I~al~~ag--IpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~ 163 (275)
T 1o66_A 93 SKEQAFAA----AAELMAAGAHMVKLEGG---VWMAETTEFLQMRG--IPVCAHIGLTPQSVFAFGGYKVQGRGGKAQAL 163 (275)
T ss_dssp CHHHHHHH----HHHHHHTTCSEEEEECS---GGGHHHHHHHHHTT--CCEEEEEESCGGGTTC-----------CHHHH
T ss_pred CHHHHHHH----HHHHHHcCCcEEEECCc---HHHHHHHHHHHHcC--CCeEeeeccCceeecccCCeEEEeChHHHHHH
Confidence 55555443 23355599999999976 35556667777765 8999776643321 111232 34445
Q ss_pred HHHhh--cCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEe
Q 019107 234 ASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 234 v~~~~--~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (346)
++.+. ...|+++|=+-|... .+.+.+.+..+.|++..
T Consensus 164 i~rA~a~~eAGA~~ivlE~vp~----~~a~~it~~l~iP~igI 202 (275)
T 1o66_A 164 LNDAKAHDDAGAAVVLMECVLA----ELAKKVTETVSCPTIGI 202 (275)
T ss_dssp HHHHHHHHHTTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHcCCcEEEEecCCH----HHHHHHHHhCCCCEEEE
Confidence 44332 125899999999853 34556666667897653
No 50
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=91.84 E-value=3.7 Score=38.14 Aligned_cols=117 Identities=16% Similarity=0.144 Sum_probs=72.6
Q ss_pred HHHhCCCCEEEEccC--CCH------HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccC-CCC---HHHHHHHhhcCCCc
Q 019107 176 ILANSGADLIAFETI--PNK------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVS-GDS---ILECASIADSCEQV 243 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~--~~~------~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~-G~~---~~~av~~~~~~~~~ 243 (346)
...+.|+|.+-+=.. ++. .+++.+.+.+++.+ +|+++-+..+... +.+ ..+ +.++++.+.. .++
T Consensus 116 ~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G--~p~lv~~~~~g~~-v~~~~~~~~~v~~aa~~a~~-lGa 191 (304)
T 1to3_A 116 AVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNG--LLSIIEPVVRPPR-CGDKFDREQAIIDAAKELGD-SGA 191 (304)
T ss_dssp HHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTT--CEEEEEEEECCCS-SCSCCCHHHHHHHHHHHHTT-SSC
T ss_pred HHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcC--CcEEEEEECCCCc-cccCCChhHHHHHHHHHHHH-cCC
Confidence 344579999863222 222 56666677777766 9998887554332 222 222 4566666654 588
Q ss_pred eEEEECCC-----ChhhHHHHHHHHhhhcCCc-EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeE
Q 019107 244 VAVGINCT-----SPRFIHGLILSVRKVTSKP-VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASL 313 (346)
Q Consensus 244 ~avGvNC~-----~p~~~~~~l~~l~~~~~~p-l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 313 (346)
+.+++.-. .++.+..+++........| +++ +|. .++++|.+.++..++.|+..
T Consensus 192 D~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~---aGG--------------~~~~~~~~~~~~a~~aGa~G 250 (304)
T 1to3_A 192 DLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVIL---SSG--------------VDEKLFPRAVRVAMEAGASG 250 (304)
T ss_dssp SEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEEC---CTT--------------SCTTTHHHHHHHHHHTTCCE
T ss_pred CEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEE---ecC--------------CCHHHHHHHHHHHHHcCCeE
Confidence 99998884 4567777777655556778 433 221 13567888888888888743
No 51
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=91.54 E-value=3.3 Score=38.07 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-cc-----CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ET-----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET-----~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+++ +++.+.+.|||.|++ -| .-+.+|=+.+++.+.+...+ |++.. .+.+..+++
T Consensus 17 iD~~~l~~----lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGv---------g~~~t~~ai 81 (293)
T 1w3i_A 17 IDKEKLKI----HAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQV---------GGLNLDDAI 81 (293)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEEC---------CCSCHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEec---------CCCCHHHHH
Confidence 67665554 677777899998775 22 12677888888888875423 55554 345667777
Q ss_pred HHhhc--CCCceEEEECCC---C---hhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 235 SIADS--CEQVVAVGINCT---S---PRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~---~---p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
+..+. ..+++++.+-.- . .+.+....+.+.+.++.|+++|-+
T Consensus 82 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPiilYn~ 131 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVYLYNY 131 (293)
T ss_dssp HHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEEEEC
Confidence 76532 258898888653 2 245666667777778899999975
No 52
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.12 E-value=2.6 Score=39.24 Aligned_cols=131 Identities=21% Similarity=0.237 Sum_probs=75.0
Q ss_pred HHHHhhcceeeccccccCHHhH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCcEEEEecC
Q 019107 63 DYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVG 141 (346)
Q Consensus 63 ~yl~AGA~iI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiG 141 (346)
.-+++|+++|.... .+|.... ...+.+.++.-+.....++.|++. + ..|-+.+.
T Consensus 89 ~a~~~g~~~v~i~~-~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~----------------------G--~~v~~~i~ 143 (307)
T 1ydo_A 89 NALEGGINEACVFM-SASETHNRKNINKSTSESLHILKQVNNDAQKA----------------------N--LTTRAYLS 143 (307)
T ss_dssp HHHHHTCSEEEEEE-ESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT----------------------T--CEEEEEEE
T ss_pred HHHhCCcCEEEEEe-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------C--CEEEEEEE
Confidence 34678999887654 4443322 334666554444444444444422 1 23444433
Q ss_pred C-ccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCc-EEEEE
Q 019107 142 S-YGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIP-AWFSF 216 (346)
Q Consensus 142 P-~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~p-v~is~ 216 (346)
- ++. ||.+. .+.+.+ .+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++. .| +-++|
T Consensus 144 ~~~~~------~~~~~----~~~~~~----~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~---~~~~~l~~ 206 (307)
T 1ydo_A 144 TVFGC------PYEKD----VPIEQV----IRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR---FPANQIAL 206 (307)
T ss_dssp CTTCB------TTTBC----CCHHHH----HHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT---SCGGGEEE
T ss_pred EEecC------CcCCC----CCHHHH----HHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh---CCCCeEEE
Confidence 3 221 23332 355544 445666777899988654 43 4788999999988863 33 45677
Q ss_pred EEcCCCcccCCCCHHHHHHHhhc
Q 019107 217 NSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 217 ~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
.+.++. |..++.++..++.
T Consensus 207 H~Hnd~----Gla~AN~laAv~a 225 (307)
T 1ydo_A 207 HFHDTR----GTALANMVTALQM 225 (307)
T ss_dssp ECBGGG----SCHHHHHHHHHHH
T ss_pred EECCCC----chHHHHHHHHHHh
Confidence 776654 6666777766654
No 53
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=91.05 E-value=2 Score=40.76 Aligned_cols=101 Identities=10% Similarity=0.075 Sum_probs=68.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-----c-cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-----E-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-----E-T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+++ .++.+++.|||.|++ | ..-+.+|-+.+++. ...+ ..||++.. .+.+..+++
T Consensus 44 ID~~~l~~----lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~g-rvpViaGv---------g~~st~eai 108 (344)
T 2hmc_A 44 PDFDALVR----KGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-LVKA-GIPVIVGT---------GAVNTASAV 108 (344)
T ss_dssp BCHHHHHH----HHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-HHHT-TCCEEEEC---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-HhCC-CCcEEEec---------CCCCHHHHH
Confidence 67665554 677777899999875 3 11266677778877 3334 69999877 345667777
Q ss_pred HHhhc--CCCceEEEECCC---C-h--hhHHHHHHHHhh-hcCCcEEEeeC
Q 019107 235 SIADS--CEQVVAVGINCT---S-P--RFIHGLILSVRK-VTSKPVIIYPN 276 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~---~-p--~~~~~~l~~l~~-~~~~pl~vypN 276 (346)
+..+. ..+++++.+-.- . | +.+....+.+.+ .++.|+++|-+
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~ 159 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNS 159 (344)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEB
T ss_pred HHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 65532 247899888763 2 2 456666677777 67899999954
No 54
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=91.01 E-value=6.5 Score=35.83 Aligned_cols=90 Identities=17% Similarity=0.127 Sum_probs=56.6
Q ss_pred HHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC------CcccCCCCH---HHHHHHhh--cCCCce
Q 019107 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG------INVVSGDSI---LECASIAD--SCEQVV 244 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~------~~l~~G~~~---~~av~~~~--~~~~~~ 244 (346)
.|.++|++.+-+|-- .|....++++.+.+ .||+-.+-+.+. +...-|.+- .++++.+. ...|++
T Consensus 102 rl~kaGa~aVklEgg---~e~~~~I~al~~ag--ipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~ 176 (264)
T 1m3u_A 102 TVMRAGANMVKIEGG---EWLVETVQMLTERA--VPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ 176 (264)
T ss_dssp HHHHTTCSEEECCCS---GGGHHHHHHHHHTT--CCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHcCCCEEEECCc---HHHHHHHHHHHHCC--CCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc
Confidence 455599999999976 35556667777755 999976655432 222345443 23333221 125889
Q ss_pred EEEECCCChhhHHHHHHHHhhhcCCcEEEe
Q 019107 245 AVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 245 avGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (346)
+|=+-|... .+.+.+.+..+.|++..
T Consensus 177 ~ivlE~vp~----~~a~~it~~l~iP~igI 202 (264)
T 1m3u_A 177 LLVLECVPV----ELAKRITEALAIPVIGI 202 (264)
T ss_dssp EEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred EEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 999999853 34556666667897653
No 55
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=90.79 E-value=11 Score=35.45 Aligned_cols=136 Identities=20% Similarity=0.271 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEccCC------------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcC---C-
Q 019107 164 ETLKEFHRRRVLILANSGADLIAFETIP------------------NKLEAKAYAELLEEEGITIPAWFSFNSKD---G- 221 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD~i~~ET~~------------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~---~- 221 (346)
+...++|.++++ .|+-+|+.|... .+...+.+.+++++.| ..+++.+.=.. .
T Consensus 37 ~~~~~~y~~rA~----gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G--~~i~~Ql~H~Gr~~~~ 110 (349)
T 3hgj_A 37 DWHLLHYPTRAL----GGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAG--AVPGIQLAHAGRKAGT 110 (349)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHHHHHHTT--CEEEEEEECCGGGCCB
T ss_pred HHHHHHHHHHhc----CCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHHHHHhCC--CeEEEEeccCCccccc
Confidence 678888988776 788888877321 3456677788888876 66777764210 0
Q ss_pred ----------C---------cc---------cCCC-------CHHHHHHHhhcCCCceEEEECCCC---------hh---
Q 019107 222 ----------I---------NV---------VSGD-------SILECASIADSCEQVVAVGINCTS---------PR--- 254 (346)
Q Consensus 222 ----------~---------~l---------~~G~-------~~~~av~~~~~~~~~~avGvNC~~---------p~--- 254 (346)
+ .. ++-+ .+.++++.+.+ .+.++|=|||.+ |.
T Consensus 111 ~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~ 189 (349)
T 3hgj_A 111 ARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALR-AGFQVIELHMAHGYLLSSFLSPLSNQ 189 (349)
T ss_dssp CCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECTTSHHHHHHCTTTCC
T ss_pred cccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEECCccchHHHHhcCCcccc
Confidence 0 00 0001 12233333333 589999999986 31
Q ss_pred --------------hHHHHHHHHhhhc--CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 255 --------------FIHGLILSVRKVT--SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 255 --------------~~~~~l~~l~~~~--~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
.+..+++.+++.. +.|+++.-+... |.+ ...+.+++.+.++.+.+.|+.+|-
T Consensus 190 R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~--------~~~-~g~~~~~~~~la~~L~~~Gvd~i~ 257 (349)
T 3hgj_A 190 RTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD--------WGE-GGWSLEDTLAFARRLKELGVDLLD 257 (349)
T ss_dssp CCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC--------CST-TSCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc--------ccC-CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3456677777765 678998766532 111 123456666667777777766553
No 56
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.76 E-value=5.2 Score=36.43 Aligned_cols=90 Identities=11% Similarity=0.178 Sum_probs=55.2
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCce-EEEECCC
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV-AVGINCT 251 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~-avGvNC~ 251 (346)
-++.+.++|||.+++=.+|. +|....++++++.+ +..+.-++ ..++.+.+...++...+.. .+.++++
T Consensus 115 f~~~~~~aGvdgvii~Dlp~-ee~~~~~~~~~~~g--l~~i~lia--------P~t~~eri~~i~~~~~gfvY~vS~~Gv 183 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIADVPV-EESAPFSKAAKAHG--IAPIFIAP--------PNADADTLKMVSEQGEGYTYLLSRAGV 183 (267)
T ss_dssp HHHHHHHHTCCEEEETTSCG-GGCHHHHHHHHHTT--CEEECEEC--------TTCCHHHHHHHHHHCCSCEEESCCCCC
T ss_pred HHHHHHHcCCCEEEeCCCCH-hhHHHHHHHHHHcC--CeEEEEEC--------CCCCHHHHHHHHHhCCCcEEEEecCCC
Confidence 35567779999999877664 67888888899877 54433331 2223333333333333332 2345653
Q ss_pred -C-----hhhHHHHHHHHhhhcCCcEEE
Q 019107 252 -S-----PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 252 -~-----p~~~~~~l~~l~~~~~~pl~v 273 (346)
+ +..+..+++++++..+.|+.+
T Consensus 184 TG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 184 TGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp C--------CHHHHHHHHHTTTCCCEEE
T ss_pred CCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 2 345778889998888889877
No 57
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=90.56 E-value=3.8 Score=37.11 Aligned_cols=149 Identities=18% Similarity=0.151 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC-CCcccCCC-CHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GINVVSGD-SILECA 234 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~-~~~l~~G~-~~~~av 234 (346)
+.+++.+ +++.+...|+|++ +++.+++..++...+..+++.-.++|+++++.... +|+....+ ...+..
T Consensus 30 t~~e~l~----~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll 105 (258)
T 4h3d_A 30 NKKDIIK----EAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLN 105 (258)
T ss_dssp SHHHHHH----HHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHH
Confidence 6677655 5556677899988 67888899999988888887544699999997543 34432221 122223
Q ss_pred HHhhcCCCceEEEECCCCh-hhHHHHHHHHhhhcCCcEEE-eeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 235 SIADSCEQVVAVGINCTSP-RFIHGLILSVRKVTSKPVII-YPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC~~p-~~~~~~l~~l~~~~~~pl~v-ypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
..+.....++.|=+-=..+ +....+++..++. ...+++ |.|- . ...+.+++.+...+..+.|+.
T Consensus 106 ~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~-~~kiI~S~Hdf-----------~--~TP~~~el~~~~~~~~~~gaD 171 (258)
T 4h3d_A 106 KEISNTGLVDLIDVELFMGDEVIDEVVNFAHKK-EVKVIISNHDF-----------N--KTPKKEEIVSRLCRMQELGAD 171 (258)
T ss_dssp HHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEES-----------S--CCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHhcCCchhhHHhhhccHHHHHHHHHHHHhC-CCEEEEEEecC-----------C--CCCCHHHHHHHHHHHHHhCCC
Confidence 3332223467777776543 4455555544332 333333 2221 1 011235677777777788875
Q ss_pred EEeecC-CCchHHHHHH
Q 019107 313 LFGGCC-RTTPNTIKAI 328 (346)
Q Consensus 313 ivGGCC-Gt~P~hI~al 328 (346)
|+==++ -.++++.-.|
T Consensus 172 IvKia~~~~~~~D~l~L 188 (258)
T 4h3d_A 172 LPKIAVMPQNEKDVLVL 188 (258)
T ss_dssp EEEEEECCSSHHHHHHH
T ss_pred EEEEEEccCCHHHHHHH
Confidence 543222 2355554443
No 58
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=90.22 E-value=1.6 Score=41.30 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=66.6
Q ss_pred CCCCEEEEccCCCHHHHH-----HHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh-
Q 019107 180 SGADLIAFETIPNKLEAK-----AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP- 253 (346)
Q Consensus 180 ~gvD~i~~ET~~~~~E~~-----a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p- 253 (346)
.++++++-|.+.. .... .+++ ... .+.|+++++... +-+.+.++++.+.. .++++|-+||.+|
T Consensus 27 Gg~gli~te~~~~-~~~~~~~~~~~~~-~~~--~~~p~~vQL~g~------~p~~~~~aA~~a~~-~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 27 SLGVRLYTEMTVD-QAVLRGNRERLLA-FRP--EEHPIALQLAGS------DPKSLAEAARIGEA-FGYDEINLNLGCPS 95 (350)
T ss_dssp CSSSBEECCCEEH-HHHHHSCHHHHHC-CCG--GGCSEEEEEECS------CHHHHHHHHHHHHH-TTCSEEEEEECCCS
T ss_pred CCCCEEEeCCEEe-chhhcCCHHHHhc-cCC--CCCeEEEEeCCC------CHHHHHHHHHHHHH-cCCCEEEECCcCCC
Confidence 5679999997643 2221 1222 122 248999999621 22456677776655 5799999998543
Q ss_pred ----------------hhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeE
Q 019107 254 ----------------RFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASL 313 (346)
Q Consensus 254 ----------------~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 313 (346)
+.+..+++.+++..+.|+.+.-..|. ... .+.++..++++.+.+.|+..
T Consensus 96 ~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~---------~~~--~~~~~~~~~a~~l~~aG~d~ 160 (350)
T 3b0p_A 96 EKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGL---------EGK--ETYRGLAQSVEAMAEAGVKV 160 (350)
T ss_dssp HHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCB---------TTC--CCHHHHHHHHHHHHHTTCCE
T ss_pred CcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCc---------Ccc--ccHHHHHHHHHHHHHcCCCE
Confidence 34566777777777889888433321 110 12345566666666666544
No 59
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=89.82 E-value=13 Score=34.72 Aligned_cols=225 Identities=16% Similarity=0.191 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (346)
.+.+.+.-++-++.|-.-|..+-.-.+........+.+ .-++.+|++..|++. + .
T Consensus 63 id~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~---~g~v~rair~iK~~~--------------------p--~ 117 (328)
T 1w1z_A 63 IDRAVEECKELYDLGIQGIDLFGIPEQKTEDGSEAYND---NGILQQAIRAIKKAV--------------------P--E 117 (328)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECCSSCCSSCGGGGCT---TSHHHHHHHHHHHHS--------------------T--T
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCccccccCCC---CChHHHHHHHHHHHC--------------------C--C
Confidence 36677777888899988665433211111111111121 247778887776553 1 2
Q ss_pred cEEEE--ecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCc
Q 019107 134 VLVAA--SVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIP 211 (346)
Q Consensus 134 ~~VaG--siGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~p 211 (346)
.+|.. |+-||-+.=++|---.| .++-++-.+...+|+-...++|+|++.==.|.+- .+.+|.+++.+.|..--
T Consensus 118 l~vitDvcLc~YT~HGHcGil~~g----~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~v 192 (328)
T 1w1z_A 118 LCIMTDVALDPFTPFGHDGLVKDG----IILNDETVEVLQKMAVSHAEAGADFVSPSDMMDG-RIGAIREALDETDHSDV 192 (328)
T ss_dssp SEEEEEECSTTTSTTSCSSEESSS----CEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTS
T ss_pred eEEEEeeecccCCCCCceeeccCC----cCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCc
Confidence 44444 45666544333322111 2567888888888888889999999997777665 46788888888775433
Q ss_pred EEEEEEEcC-------------------CCc--ccCCCCHHHHHHHhh--cCCCceEEEECCCChhhHHHHHHHHhhhcC
Q 019107 212 AWFSFNSKD-------------------GIN--VVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTS 268 (346)
Q Consensus 212 v~is~~~~~-------------------~~~--l~~G~~~~~av~~~~--~~~~~~avGvNC~~p~~~~~~l~~l~~~~~ 268 (346)
-++|-+.+= +.+ ..|-..-.+|++.+. -..|++.|.|-=.-|. +.+++.+++.++
T Consensus 193 ~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk~~~~ 270 (328)
T 1w1z_A 193 GILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAY--LDIVWRTKERFD 270 (328)
T ss_dssp EEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEESCGGG--HHHHHHHHHHHC
T ss_pred eeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHHHhcC
Confidence 444665431 111 112222244554432 1247899998766442 567777777789
Q ss_pred CcEEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 269 KPVIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 269 ~pl~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
.|+.+|--+|+. .-...+.|.+. ...+.|....++.+|+.+|
T Consensus 271 ~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~I 315 (328)
T 1w1z_A 271 VPVAIYHVSGEYAMVKAAAAKGWIDE----DRVMMESLLCMKRAGADII 315 (328)
T ss_dssp SCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 999999998862 11223457542 2347777788889999876
No 60
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.79 E-value=6.7 Score=37.08 Aligned_cols=81 Identities=14% Similarity=0.056 Sum_probs=53.6
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHH---HHHHhhcCCCce-EEEECCCC------------hhhHHHHHHHHhhhcCCcE
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILE---CASIADSCEQVV-AVGINCTS------------PRFIHGLILSVRKVTSKPV 271 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~---av~~~~~~~~~~-avGvNC~~------------p~~~~~~l~~l~~~~~~pl 271 (346)
.+.|+++++. |.++++ +++.+.+. +.+ +|=|||++ |+.+..+++.+++..++|+
T Consensus 127 ~~~pvivsI~---------g~~~~d~~~~a~~l~~~-g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV 196 (345)
T 3oix_A 127 DSKNHFLSLV---------GMSPEETHTILXMVEAS-KYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPL 196 (345)
T ss_dssp TCCCCEEEEC---------CSSHHHHHHHHHHHHHS-SCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCE
T ss_pred CCCCEEEEec---------CCCHHHHHHHHHHHhcc-CCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCe
Confidence 3689999993 444554 45555432 444 89999863 4667888888888888999
Q ss_pred EEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeE
Q 019107 272 IIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASL 313 (346)
Q Consensus 272 ~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 313 (346)
.++--.+ ++..++++.+......|+.+
T Consensus 197 ~vKi~p~---------------~~~~~~a~~~~~aga~~i~~ 223 (345)
T 3oix_A 197 GIKLPPY---------------FDIVHFDQAAAIFNXYPLTF 223 (345)
T ss_dssp EEEECCC---------------CCHHHHHHHHHHHTTSCCSE
T ss_pred EEEECCC---------------CCHHHHHHHHHHhCCCceEE
Confidence 8864221 23567777776665666653
No 61
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=89.74 E-value=3.4 Score=39.43 Aligned_cols=101 Identities=20% Similarity=0.069 Sum_probs=65.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-ccCC-----CHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ETIP-----NKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~~-----~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+.+.+ .++.+.+.|||.|++ -|-. +.+|=+.+++.+.+ .+..+||++.. .+.+..++
T Consensus 77 ID~~al~~----lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv---------g~~st~ea 143 (360)
T 4dpp_A 77 FDLEAYDD----LVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT---------GSNSTREA 143 (360)
T ss_dssp BCHHHHHH----HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC---------CCSSHHHH
T ss_pred cCHHHHHH----HHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec---------CCCCHHHH
Confidence 67655544 677778899998876 2222 56777777776655 33368999876 34566777
Q ss_pred HHHhhc--CCCceEEEECCC-----ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 234 ASIADS--CEQVVAVGINCT-----SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-----~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++..+. ..+++++.+-.- +.+.+....+.+.+. .|+++|-+
T Consensus 144 i~la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a--~PiilYNi 191 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM--GPTIIYNV 191 (360)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG--SCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh--CCEEEEeC
Confidence 775532 257888888652 234455555555543 69999965
No 62
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=89.72 E-value=13 Score=34.81 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCH-----HhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATI-----QGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGR 128 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~-----~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~ 128 (346)
.+.+.+.-++-++.|-.-|.. |...+ .......+.+ .-++.+|++..|+..
T Consensus 68 id~l~~~~~~~~~lGi~~v~L--Fgv~~~~~~KD~~gs~A~~~---~g~v~rair~iK~~~------------------- 123 (342)
T 1h7n_A 68 VNRLKDYLKPLVAKGLRSVIL--FGVPLIPGTKDPVGTAADDP---AGPVIQGIKFIREYF------------------- 123 (342)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--EEECCSTTCCBTTCGGGGCT---TSHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecccCccCCCCccccccCCC---CChHHHHHHHHHHHC-------------------
Confidence 366777778889999885554 33311 1111111221 247777777766552
Q ss_pred CCCCCcEEEE--ecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHh
Q 019107 129 ISSRPVLVAA--SVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE 206 (346)
Q Consensus 129 ~~~~~~~VaG--siGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~ 206 (346)
+ ..+|.. |+-||-+.=++|--.. ...++-++-.+...+|+-...++|+|++.==-|.+- .+.+|.+++.+.
T Consensus 124 -p--dl~VitDvcLc~YT~HGHcGil~~---~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~ 196 (342)
T 1h7n_A 124 -P--ELYIICDVCLCEYTSHGHCGVLYD---DGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDG-RIRDIKRGLINA 196 (342)
T ss_dssp -T--TSEEEEEECSTTTBTTCCSSCBCT---TSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTT-HHHHHHHHHHHT
T ss_pred -C--CeEEEEeeecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHHC
Confidence 1 244444 4666655444442210 112677888888888988899999999997777665 568888999998
Q ss_pred CC-CCcEEEEEEEcC-------------------CCc--ccCCCCHHHHHHHh--hcCCCceEEEECCCChhhHHHHHHH
Q 019107 207 GI-TIPAWFSFNSKD-------------------GIN--VVSGDSILECASIA--DSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 207 ~~-~~pv~is~~~~~-------------------~~~--l~~G~~~~~av~~~--~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
|. ..--++|.+.+- +.+ ..|--.-.++++.+ +-..|++.|.|-=.-|. +.+++.
T Consensus 197 G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~ 274 (342)
T 1h7n_A 197 NLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFY--LDIMRD 274 (342)
T ss_dssp TCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGG--HHHHHH
T ss_pred CCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCCeEEEecCccH--HHHHHH
Confidence 75 333444776431 111 22333445566544 22357899998766443 567777
Q ss_pred Hhhhc-CCcEEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 263 VRKVT-SKPVIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 263 l~~~~-~~pl~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
+++.+ +.|+.+|--+|+. .-...+.|.+. ...+.|....++.+|+.+|=
T Consensus 275 vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 327 (342)
T 1h7n_A 275 ASEICKDLPICAYHVSGEYAMLHAAAEKGVVDL----KTIAFESHQGFLRAGARLII 327 (342)
T ss_dssp HHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHhccCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEEE
Confidence 77777 8999999998862 11122456542 23477888888999998874
No 63
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=89.65 E-value=7.9 Score=35.60 Aligned_cols=140 Identities=13% Similarity=0.059 Sum_probs=79.8
Q ss_pred CChHHHHHHHHHHHHhhcceeeccccccCHHhH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 019107 52 SSPHLVRKVHLDYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (346)
Q Consensus 52 ~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~ 130 (346)
.+.+.|++ -+++|.+.|.... .+|.... ...+.+.++.-+..+..|+.|++.
T Consensus 84 ~~~~~i~~----a~~aG~~~v~i~~-~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~---------------------- 136 (302)
T 2ftp_A 84 PNLKGFEA----ALESGVKEVAVFA-AASEAFSQRNINCSIKDSLERFVPVLEAARQH---------------------- 136 (302)
T ss_dssp CSHHHHHH----HHHTTCCEEEEEE-ESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CCHHHHHH----HHhCCcCEEEEEE-ecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC----------------------
Confidence 45554444 4668999877543 3333222 333666555545555555555432
Q ss_pred CCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc---CCCHHHHHHHHHHHHHhC
Q 019107 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~ 207 (346)
...|-+.++-.... ||.+. .+.+++.+ .++.+.+.|+|.|.+=+ +..+.+....++.+++.-
T Consensus 137 --G~~V~~~l~~~~~~-----e~~~~----~~~~~~~~----~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~ 201 (302)
T 2ftp_A 137 --QVRVRGYISCVLGC-----PYDGD----VDPRQVAW----VARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEV 201 (302)
T ss_dssp --TCEEEEEEECTTCB-----TTTBC----CCHHHHHH----HHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTS
T ss_pred --CCeEEEEEEEEeeC-----CcCCC----CCHHHHHH----HHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhC
Confidence 24466666653211 23221 46665555 55567778999997653 246778888888887632
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
.+.| +.|.+.++. |..++.+...++.
T Consensus 202 ~~~~--l~~H~Hn~~----Gla~An~laAv~a 227 (302)
T 2ftp_A 202 PRER--LAGHFHDTY----GQALANIYASLLE 227 (302)
T ss_dssp CGGG--EEEEEBCTT----SCHHHHHHHHHHT
T ss_pred CCCe--EEEEeCCCc----cHHHHHHHHHHHh
Confidence 1244 566666554 6677777777754
No 64
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=89.13 E-value=14 Score=34.32 Aligned_cols=224 Identities=17% Similarity=0.206 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCc
Q 019107 55 HLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPV 134 (346)
Q Consensus 55 e~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (346)
+.+.+.-++-++.|-.-|..+---.+........+.+ .-++.+|++..+++. + ..
T Consensus 58 d~l~~~~~~~~~lGi~~v~LFgvp~~Kd~~gs~A~~~---~g~v~rair~iK~~~--------------------p--dl 112 (323)
T 1l6s_A 58 KHLAREIERIANAGIRSVMTFGISHHTDETGSDAWRE---DGLVARMSRICKQTV--------------------P--EM 112 (323)
T ss_dssp GGHHHHHHHHHHHTCCEEEEEEECSSCBSSCGGGGST---TSHHHHHHHHHHHHC--------------------T--TS
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCccccccCCC---CCcHHHHHHHHHHHC--------------------C--Ce
Confidence 4556666777889988555432211111111111111 247777777766552 1 24
Q ss_pred EEEE--ecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcE
Q 019107 135 LVAA--SVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPA 212 (346)
Q Consensus 135 ~VaG--siGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv 212 (346)
+|.. |+-||-+.=++|---. ..++-++-.+...+|+-...++|+|++.==.|.+- .+.++.+++.+.|..---
T Consensus 113 ~vitDvcLc~YT~HGHcGil~~----g~V~ND~Tl~~Lak~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~v~ 187 (323)
T 1l6s_A 113 IVMSDTCFCEYTSHGHCGVLCE----HGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDG-QVQAIRQALDAAGFKDTA 187 (323)
T ss_dssp EEEEEECSTTTBSSCCSSCBCS----SSBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTTCE
T ss_pred EEEEeeeccccCCCCceEeccC----CcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHhCCCCCce
Confidence 4443 4566655444443211 12677888888888988899999999997777665 567888889887753223
Q ss_pred EEEEEEcC------------------CCc--ccCCCCHHHHHHHh--hcCCCceEEEECCCChhhHHHHHHHHhhhcCCc
Q 019107 213 WFSFNSKD------------------GIN--VVSGDSILECASIA--DSCEQVVAVGINCTSPRFIHGLILSVRKVTSKP 270 (346)
Q Consensus 213 ~is~~~~~------------------~~~--l~~G~~~~~av~~~--~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~p 270 (346)
++|.+.+- +.+ ..|--.-.++++.+ +-..|++.|.|-=.-|. +.+++.+++.+..|
T Consensus 188 ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~~~~P 265 (323)
T 1l6s_A 188 IMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAY--LDIVRELRERTELP 265 (323)
T ss_dssp EBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTC--HHHHHHHHTTCSSC
T ss_pred eeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCcch--hHHHHHHHHhcCCC
Confidence 33543320 111 22333445666544 22357899998766543 56777888888999
Q ss_pred EEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 271 VIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 271 l~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+.+|--+|+. .-...+.|... ...+.|....++.+|+.+|
T Consensus 266 ~aaYqVSGEYAMikaAa~~GwiD~----~~~vlEsl~~~kRAGAd~I 308 (323)
T 1l6s_A 266 IGAYQVSGEYAMIKFAALAGAIDE----EKVVLESLGSIKRAGADLI 308 (323)
T ss_dssp EEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHTTCSEE
T ss_pred eEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEE
Confidence 9999998862 11122457542 2347788888899999887
No 65
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=88.88 E-value=9.6 Score=37.53 Aligned_cols=96 Identities=11% Similarity=0.097 Sum_probs=67.3
Q ss_pred HHHHHHhCCCCEEE-EccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH---HHHhhcCCCceEEEE
Q 019107 173 RVLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC---ASIADSCEQVVAVGI 248 (346)
Q Consensus 173 ~i~~l~~~gvD~i~-~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a---v~~~~~~~~~~avGv 248 (346)
-++.+.++|+|.|- |-..++...++.+++++++.| +.+..++++.+... .++..+ ++.+.+ .+++.|.+
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~~----~~~e~~~~~a~~l~~-~Gad~I~l 177 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMG--AHAQGTLCYTTSPV----HNLQTWVDVAQQLAE-LGVDSIAL 177 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCCTT----CCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCC--CEEEEEEEeeeCCC----CCHHHHHHHHHHHHH-CCCCEEEE
Confidence 45667789999885 446677888888999999987 66766665443322 244444 444434 47777777
Q ss_pred CC----CChhhHHHHHHHHhhhcCCcEEEee
Q 019107 249 NC----TSPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 249 NC----~~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
-= ..|..+..+++.+++..+.|+.+..
T Consensus 178 ~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~ 208 (464)
T 2nx9_A 178 KDMAGILTPYAAEELVSTLKKQVDVELHLHC 208 (464)
T ss_dssp EETTSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred cCCCCCcCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 42 3599999999999887788988765
No 66
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.85 E-value=6.2 Score=36.07 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=62.9
Q ss_pred HHHHHhCCCCEEEEcc-CC--------------CHHHHHHHHHHHHHhCCCCcEE--EE--EEEcCCCcccCCCCHHHHH
Q 019107 174 VLILANSGADLIAFET-IP--------------NKLEAKAYAELLEEEGITIPAW--FS--FNSKDGINVVSGDSILECA 234 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~--------------~~~E~~a~~~a~~~~~~~~pv~--is--~~~~~~~~l~~G~~~~~av 234 (346)
++...++|+|.+.+-. .+ +++.++.+++.+++.| ++|- ++ |.+++..+ .++..++
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~----~~~~~~~ 158 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDG--LAIRGYVSCVVECPYDGP----VTPQAVA 158 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECSSEETTTEE----CCHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC--CeEEEEEEEEecCCcCCC----CCHHHHH
Confidence 4556678999987753 22 4556666788888877 6665 33 33333322 3455555
Q ss_pred HHhh---cCCCceEEEECC----CChhhHHHHHHHHhhhcC-CcEEEee--CCC
Q 019107 235 SIAD---SCEQVVAVGINC----TSPRFIHGLILSVRKVTS-KPVIIYP--NSG 278 (346)
Q Consensus 235 ~~~~---~~~~~~avGvNC----~~p~~~~~~l~~l~~~~~-~pl~vyp--N~g 278 (346)
+.++ + .+++.|.+.= ..|..+..+++.+++..+ .|+.+.. +.|
T Consensus 159 ~~~~~~~~-~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 211 (295)
T 1ydn_A 159 SVTEQLFS-LGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGG 211 (295)
T ss_dssp HHHHHHHH-HTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHh-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcc
Confidence 5443 4 4667665542 359999999999988776 7888877 444
No 67
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=88.72 E-value=12 Score=34.26 Aligned_cols=99 Identities=15% Similarity=0.078 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC------CcccCCCCHH---H
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG------INVVSGDSIL---E 232 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~------~~l~~G~~~~---~ 232 (346)
+.+++.+.- ..|.++|++.+-+|--... ...++++.+.+ .|++-.+-..+. +...-|.+-+ +
T Consensus 104 s~~~a~~~a----~rl~kaGa~aVklEdg~~~---~~~i~~l~~~G--Ipv~gHlgltPq~~~~~gg~~vqgrt~~~a~~ 174 (275)
T 3vav_A 104 TPADAFASA----VKLMRAGAQMVKFEGGEWL---AETVRFLVERA--VPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQ 174 (275)
T ss_dssp SHHHHHHHH----HHHHHTTCSEEEEECCGGG---HHHHHHHHHTT--CCEEEEEESCGGGHHHHC---CCCCSHHHHHH
T ss_pred CHHHHHHHH----HHHHHcCCCEEEECCchhH---HHHHHHHHHCC--CCEEEecCCCceEEeccCCeEEEcCCHHHHHH
Confidence 556655433 3344579999999976433 34555566655 899987764331 2222454433 3
Q ss_pred HHHHhh--cCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEE
Q 019107 233 CASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 233 av~~~~--~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (346)
+++.+. ...|+++|=+-|...+ +++.+.+..+.|++-
T Consensus 175 ~i~rA~a~~eAGA~~ivlE~vp~~----~a~~It~~l~iP~ig 213 (275)
T 3vav_A 175 LLRDARAVEEAGAQLIVLEAVPTL----VAAEVTRELSIPTIG 213 (275)
T ss_dssp HHHHHHHHHHHTCSEEEEESCCHH----HHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHcCCCEEEecCCCHH----HHHHHHHhCCCCEEE
Confidence 333321 1258999999999543 455555566789654
No 68
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=88.27 E-value=4.9 Score=37.35 Aligned_cols=83 Identities=13% Similarity=0.082 Sum_probs=51.6
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
+|+++..++|+|.|++|-+.+.+|++.+++.++ +.|+++.+.. .+.. ...++.+..+ .++.-+-.-++
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~----~~Pl~~n~~~--~g~~-p~~~~~eL~~-----lGv~~v~~~~~ 241 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGITSREMARQVIQDLA----GWPLLLNMVE--HGAT-PSISAAEAKE-----MGFRIIIFPFA 241 (302)
T ss_dssp HHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT----TSCEEEECCT--TSSS-CCCCHHHHHH-----HTCSEEEETTT
T ss_pred HHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc----CCceeEEEec--CCCC-CCCCHHHHHH-----cCCCEEEEchH
Confidence 488999999999999999999999988877654 3788776532 2221 1223443332 24444444443
Q ss_pred C----hhhHHHHHHHHhhh
Q 019107 252 S----PRFIHGLILSVRKV 266 (346)
Q Consensus 252 ~----p~~~~~~l~~l~~~ 266 (346)
. ...+...++.+.+.
T Consensus 242 ~~raa~~A~~~~~~~i~~~ 260 (302)
T 3fa4_A 242 ALGPAVAAMREAMEKLKRD 260 (302)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 2 24455556666543
No 69
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=88.20 E-value=12 Score=34.21 Aligned_cols=68 Identities=13% Similarity=0.054 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEE-ccC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAF-ETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~-ET~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+.+.+ .+.++.+.+.|+|.|.+ .|+ -++.+...+++.+++.-.+. -++|.+.++. |..++.++..+.
T Consensus 154 ~~~~~----~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~--~i~~H~Hn~~----Gla~An~laA~~ 223 (298)
T 2cw6_A 154 SPAKV----AEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLA--ALAVHCHDTY----GQALANTLMALQ 223 (298)
T ss_dssp CHHHH----HHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGG--GEEEEEBCTT----SCHHHHHHHHHH
T ss_pred CHHHH----HHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCC--eEEEEECCCC----chHHHHHHHHHH
Confidence 55544 44566778899999854 343 37889999999888742124 4677777665 555666666665
Q ss_pred c
Q 019107 239 S 239 (346)
Q Consensus 239 ~ 239 (346)
.
T Consensus 224 a 224 (298)
T 2cw6_A 224 M 224 (298)
T ss_dssp T
T ss_pred h
Confidence 3
No 70
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.16 E-value=2.7 Score=39.98 Aligned_cols=78 Identities=14% Similarity=0.084 Sum_probs=52.1
Q ss_pred CCcEEEEEEEcCCCcccCCCCHH---HHHHHhhc--CCCceEEEECCCC------------hhhHHHHHHHHhhhcCCcE
Q 019107 209 TIPAWFSFNSKDGINVVSGDSIL---ECASIADS--CEQVVAVGINCTS------------PRFIHGLILSVRKVTSKPV 271 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~~---~av~~~~~--~~~~~avGvNC~~------------p~~~~~~l~~l~~~~~~pl 271 (346)
+.|+++++. |.+++ ++++.+.. ..++++|=|||+. |+.+..+++.+++..++|+
T Consensus 126 ~~pvivsI~---------G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV 196 (354)
T 4ef8_A 126 KKPLFLSMS---------GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEEC---------CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCE
T ss_pred CCcEEEEec---------cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCe
Confidence 489999983 44444 44555541 1357899999862 5667788888888889999
Q ss_pred EEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcC
Q 019107 272 IIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAG 310 (346)
Q Consensus 272 ~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 310 (346)
.|+--.+ ++.+++++.+....+.|
T Consensus 197 ~vKi~p~---------------~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 197 GVKMPPY---------------FDFAHFDAAAEILNEFP 220 (354)
T ss_dssp EEEECCC---------------CSHHHHHHHHHHHHTCT
T ss_pred EEEecCC---------------CCHHHHHHHHHHHHhCC
Confidence 8864221 23566777776666666
No 71
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=88.12 E-value=6.4 Score=40.21 Aligned_cols=136 Identities=22% Similarity=0.238 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC------------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC--
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP------------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGI-- 222 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~------------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~-- 222 (346)
.+.+.++|+++++ .|+.+|+.|... .+...+.+.+++++.+ .++++.+.= ...
T Consensus 36 ~~~~~~~y~~ra~----gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h-~Gr~~ 108 (671)
T 1ps9_A 36 AERLAAFYAERAR----HGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEG--GKIALQILH-TGRYS 108 (671)
T ss_dssp HHHHHHHHHHHHH----TTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTT--CCEEEEECC-CGGGS
T ss_pred cHHHHHHHHHHhc----CCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEecc-CCccc
Confidence 4778888988764 789999988542 1234566667777766 788888842 100
Q ss_pred --------------------cccCC-------CCHHHHHHHhhcCCCceEEEECCCC---------h-------------
Q 019107 223 --------------------NVVSG-------DSILECASIADSCEQVVAVGINCTS---------P------------- 253 (346)
Q Consensus 223 --------------------~l~~G-------~~~~~av~~~~~~~~~~avGvNC~~---------p------------- 253 (346)
+-++- +.+.+++..+.+ .+.++|=+||.+ |
T Consensus 109 ~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~-aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~ 187 (671)
T 1ps9_A 109 YQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLARE-AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDY 187 (671)
T ss_dssp BSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSH
T ss_pred CCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhCCCccCCCcCcCCCcH
Confidence 00011 124445554444 589999999864 2
Q ss_pred ----hhHHHHHHHHhhhc--CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 254 ----RFIHGLILSVRKVT--SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 254 ----~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
..+..+++.+++.. +.|+++.-+... +.+ .+.+.+++.+.++.+.+.|+.+|.
T Consensus 188 ~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~--------~~~-~g~~~~~~~~~a~~l~~~g~d~i~ 246 (671)
T 1ps9_A 188 RNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD--------LVE-DGGTFAETVELAQAIEAAGATIIN 246 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC--------CST-TCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEECccc--------cCC-CCCCHHHHHHHHHHHHhcCCCEEE
Confidence 23456666777665 678877544321 111 123456677777777777777763
No 72
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=87.85 E-value=6.4 Score=37.58 Aligned_cols=55 Identities=13% Similarity=0.142 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCC-cEEEEEEEcCCC
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITI-PAWFSFNSKDGI 222 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~-pv~is~~~~~~~ 222 (346)
+++.+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++.-... .+.+++.+.++.
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 215 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDL 215 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTT
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCC
Confidence 355567777888999998654 43 47889999999888742111 177899988764
No 73
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.78 E-value=10 Score=35.49 Aligned_cols=65 Identities=14% Similarity=0.113 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+++.+.++.+.+.|+|.|.+- |+ -.+.++..+++.+++.-. .+-++|.+.++. |..++.++..++
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p--~~~i~~H~Hnd~----GlA~AN~laAv~ 236 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP--DIHFEFHGHNDY----DLSVANSLQAIR 236 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT--TSCEEEECBCTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC--CCeEEEEecCCc----chHHHHHHHHHH
Confidence 466677888999999999654 43 478899999998887421 345677777654 444555555443
No 74
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=87.57 E-value=18 Score=35.21 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=85.3
Q ss_pred HHHHHHHhCCCCEEEEccCC---------------CHHHHHHHHHHHHHhC--CCCcEEEEEEEcCCCc-c---------
Q 019107 172 RRVLILANSGADLIAFETIP---------------NKLEAKAYAELLEEEG--ITIPAWFSFNSKDGIN-V--------- 224 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~---------------~~~E~~a~~~a~~~~~--~~~pv~is~~~~~~~~-l--------- 224 (346)
+.++.+.++||-.+-||-.. ..+|...=+.+++..- .+.+++|--..+.... |
T Consensus 167 ~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d 246 (429)
T 1f8m_A 167 ELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERD 246 (429)
T ss_dssp HHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTT
T ss_pred HHHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccc
Confidence 46788999999999999764 2445444444443321 1367777776654321 0
Q ss_pred ---------cC-----CCCHHHHHHHhhc-CCCceEEEECC-C-ChhhHHHHHHHHhhhcCCcEEEeeCCCCcccccccc
Q 019107 225 ---------VS-----GDSILECASIADS-CEQVVAVGINC-T-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKK 287 (346)
Q Consensus 225 ---------~~-----G~~~~~av~~~~~-~~~~~avGvNC-~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~ 287 (346)
+. ...++++++.+.. ..++++|=+-. . .++.+..+.+.+.......+++|+.+.. -.
T Consensus 247 ~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~gAD~if~e~~~~~~eei~~f~~~v~~~~P~~~La~n~sPs------f~ 320 (429)
T 1f8m_A 247 QPFITGERTREGFYRTKNGIEPCIARAKAYAPFADLIWMETGTPDLEAARQFSEAVKAEYPDQMLAYNCSPS------FN 320 (429)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHHHHHHHGGGCSEEEECCSSCCHHHHHHHHHHHHTTCTTCEEEEECCTT------SC
T ss_pred cccccCCCCcccccccccCHHHHHHHHHHHHhcCCEEEeCCCCCCHHHHHHHHHHhcccCCCceeecCCCCC------CC
Confidence 11 2468899887643 12678888864 3 5788888888876422222677876532 24
Q ss_pred ccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 288 WVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
|... ++++++..+..++.+.|++++
T Consensus 321 w~~~--~~~~~~~~f~~eL~~lG~~~v 345 (429)
T 1f8m_A 321 WKKH--LDDATIAKFQKELAAMGFKFQ 345 (429)
T ss_dssp HHHH--CCHHHHHHHHHHHHHHTEEEE
T ss_pred cccc--cchhhHhHHHHHHHHcCCeEE
Confidence 5332 568889999999999998654
No 75
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=87.30 E-value=1.6 Score=40.57 Aligned_cols=91 Identities=20% Similarity=0.174 Sum_probs=56.4
Q ss_pred hCCCCEEEEccCCCHHHHH---HHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh--
Q 019107 179 NSGADLIAFETIPNKLEAK---AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP-- 253 (346)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~---a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p-- 253 (346)
+.|+++++-|.+..-.... ...+.+ ....+.|+++++.-. +-+.+.++++.+.. . +++|-+||.+|
T Consensus 26 ~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~------~~~~~~~aa~~a~~-~-~d~Iein~gcP~~ 96 (318)
T 1vhn_A 26 EWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGS------EPNELSEAARILSE-K-YKWIDLNAGCPVR 96 (318)
T ss_dssp TTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECS------CHHHHHHHHHHHTT-T-CSEEEEEECCCCH
T ss_pred HHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCC------CHHHHHHHHHHHHH-h-CCEEEEECCCCcH
Confidence 4688999999664221111 011112 112358999999621 22456667776655 4 89999998654
Q ss_pred ---------------hhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 254 ---------------RFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 254 ---------------~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
+.+..+++.+++..+.|+.+.-..|
T Consensus 97 ~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G 136 (318)
T 1vhn_A 97 KVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLG 136 (318)
T ss_dssp HHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred hcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCC
Confidence 2355667777777788998886554
No 76
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=87.23 E-value=3.6 Score=37.71 Aligned_cols=102 Identities=14% Similarity=0.108 Sum_probs=62.9
Q ss_pred HHHHHHHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 170 HRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 170 ~~~~i~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
|.+.++...+.| +|++=+|-...-+..+.+++.+++.+ .++++|+.-. ..+++-+.+.+.+..+.. .+++.+=+
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~~--~kvI~S~Hdf--~~tP~~~el~~~~~~~~~-~GaDIvKi 195 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQHN--VAVIMSNHDF--HKTPAAEEIVQRLRKMQE-LGADIPKI 195 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhCC--CEEEEEeecC--CCCcCHHHHHHHHHHHHH-cCCCEEEE
Confidence 444455555567 99999997766666666777667654 8999998632 222333334444444444 46666666
Q ss_pred CCC--ChhhHHHHHHHHhh---h-cCCcEEEeeC
Q 019107 249 NCT--SPRFIHGLILSVRK---V-TSKPVIIYPN 276 (346)
Q Consensus 249 NC~--~p~~~~~~l~~l~~---~-~~~pl~vypN 276 (346)
-+. +++....+++.... . .+.|++++.-
T Consensus 196 a~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~M 229 (276)
T 3o1n_A 196 AVMPQTKADVLTLLTATVEMQERYADRPIITMSM 229 (276)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEEC
T ss_pred EecCCChHHHHHHHHHHHHHHhcCCCCCEEEEEC
Confidence 554 56666666664333 2 5679988854
No 77
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=86.93 E-value=11 Score=34.19 Aligned_cols=28 Identities=14% Similarity=0.265 Sum_probs=24.6
Q ss_pred CCChHHHHHHHHHHHHhhcceeeccccc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITASYQ 78 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~TnTy~ 78 (346)
.+++|...++-+.--++||++|.--||.
T Consensus 33 ~~~~e~a~~~a~~l~~~Ga~~vk~~~fk 60 (262)
T 1zco_A 33 IESREQIMKVAEFLAEVGIKVLRGGAFK 60 (262)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEecc
Confidence 5788999998888899999999988885
No 78
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=86.90 E-value=1.7 Score=38.83 Aligned_cols=86 Identities=15% Similarity=0.127 Sum_probs=55.1
Q ss_pred HHHHHHHhCCCCEEEEccC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 172 RRVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
++++.+.+.|+|++++-+- .+..+++.+++.+++.+ +++++.. .+++++.... . .+++.||+|
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v-----------~t~eea~~a~-~-~Gad~Ig~~ 156 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHHH--LLTMADC-----------SSVDDGLACQ-R-LGADIIGTT 156 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC-----------CSHHHHHHHH-H-TTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHCC--CEEEEeC-----------CCHHHHHHHH-h-CCCCEEEEc
Confidence 4566677899999988764 23456677777788765 7777654 2456665544 3 478999976
Q ss_pred CCC-------hhhHHHHHHHHhhhcCCcEEE
Q 019107 250 CTS-------PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~~-------p~~~~~~l~~l~~~~~~pl~v 273 (346)
-.. ...-..+++++.+. +.|+++
T Consensus 157 ~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA 186 (232)
T 3igs_A 157 MSGYTTPDTPEEPDLPLVKALHDA-GCRVIA 186 (232)
T ss_dssp TTTSSSSSCCSSCCHHHHHHHHHT-TCCEEE
T ss_pred CccCCCCCCCCCCCHHHHHHHHhc-CCcEEE
Confidence 321 11123566777665 778764
No 79
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.54 E-value=0.64 Score=43.74 Aligned_cols=44 Identities=20% Similarity=0.028 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.-.++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+.+.++
T Consensus 190 ~ai~Ra~Ay~eAGAd~i~~e~~~~~e~~~~i~~~l-----~~P~lan~~ 233 (318)
T 1zlp_A 190 EGIRRANLYKEAGADATFVEAPANVDELKEVSAKT-----KGLRIANMI 233 (318)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHS-----CSEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhc-----CCCEEEEec
Confidence 34457889999999999999999999998877754 388877653
No 80
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=86.31 E-value=12 Score=37.61 Aligned_cols=96 Identities=9% Similarity=0.059 Sum_probs=66.4
Q ss_pred HHHHHHhCCCCEEE-EccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH---hhcCCCceEEEE
Q 019107 173 RVLILANSGADLIA-FETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGI 248 (346)
Q Consensus 173 ~i~~l~~~gvD~i~-~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~---~~~~~~~~avGv 248 (346)
-++.+.++|+|.|- |-..++...++.+++++++.| +.+-.+|++.+.. ..++..+++. +.+ .+++.|.+
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G--~~v~~~i~~~~~~----~~~~e~~~~~a~~l~~-~Gad~I~L 194 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAG--KHAQGTICYTISP----VHTVEGYVKLAGQLLD-MGADSIAL 194 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTT--CEEEEEEECCCST----TCCHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCC--CeEEEEEEeeeCC----CCCHHHHHHHHHHHHH-cCCCEEEe
Confidence 45667789999885 446677788888999999987 6665566554332 2245444443 333 47777766
Q ss_pred C----CCChhhHHHHHHHHhhhc--CCcEEEee
Q 019107 249 N----CTSPRFIHGLILSVRKVT--SKPVIIYP 275 (346)
Q Consensus 249 N----C~~p~~~~~~l~~l~~~~--~~pl~vyp 275 (346)
- ...|..+..+++.+++.. +.|+.+..
T Consensus 195 ~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~ 227 (539)
T 1rqb_A 195 KDMAALLKPQPAYDIIKAIKDTYGQKTQINLHC 227 (539)
T ss_dssp EETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 4 235999999999998876 67888775
No 81
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=86.04 E-value=0.68 Score=43.09 Aligned_cols=83 Identities=13% Similarity=0.106 Sum_probs=51.9
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
-.++++++.++|+|.|++|.+++.++++.+.+.++ .|+++.++.. ++. ...+. +.+.. .|+..|-+-
T Consensus 169 ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~--g~~-p~~~~----~eL~~-~G~~~v~~~ 235 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEF--GAT-PLFTT----DELRS-AHVAMALYP 235 (295)
T ss_dssp HHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSS--SSS-CCCCH----HHHHH-TTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEeccc--CCC-CCCCH----HHHHH-cCCCEEEEC
Confidence 34578899999999999999999999998887653 7887766421 111 11222 33433 466666554
Q ss_pred CCC----hhhHHHHHHHHhh
Q 019107 250 CTS----PRFIHGLILSVRK 265 (346)
Q Consensus 250 C~~----p~~~~~~l~~l~~ 265 (346)
... ...+..+++.+++
T Consensus 236 ~~~~~aa~~a~~~~~~~i~~ 255 (295)
T 1xg4_A 236 LSAFRAMNRAAEHVYNVLRQ 255 (295)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 442 2334445555544
No 82
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=85.98 E-value=14 Score=33.63 Aligned_cols=134 Identities=12% Similarity=0.028 Sum_probs=75.3
Q ss_pred HHHHHhhcceeeccccccCHHhH-HhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCcEEEEec
Q 019107 62 LDYLDAGANIIITASYQATIQGF-EAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASV 140 (346)
Q Consensus 62 ~~yl~AGA~iI~TnTy~as~~~l-~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsi 140 (346)
+..+++|.+.|.... .+|.... ...+.+.++.-+.....|+.|++. .+.|-+.+
T Consensus 86 ~~a~~~G~~~V~i~~-~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~------------------------G~~V~~~l 140 (295)
T 1ydn_A 86 EAAAAAHADEIAVFI-SASEGFSKANINCTIAESIERLSPVIGAAIND------------------------GLAIRGYV 140 (295)
T ss_dssp HHHHHTTCSEEEEEE-ESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT------------------------TCEEEEEE
T ss_pred HHHHHCCCCEEEEEE-ecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc------------------------CCeEEEEE
Confidence 456779999887643 2343322 233555444444444555555432 23455555
Q ss_pred CCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc---CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 141 GSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 141 GP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
+-.+.. ||.+ ..+.+++.++ ++.+.+.|||.|.+-+ +..+.+....++.+++.-...| +.+.
T Consensus 141 ~~~~~~-----e~~~----~~~~~~~~~~----~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~--l~~H 205 (295)
T 1ydn_A 141 SCVVEC-----PYDG----PVTPQAVASV----TEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHS--LAGH 205 (295)
T ss_dssp ECSSEE-----TTTE----ECCHHHHHHH----HHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGG--EEEE
T ss_pred EEEecC-----CcCC----CCCHHHHHHH----HHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCe--EEEE
Confidence 553211 2211 1366666554 4556678999997652 2477888888888887421244 4566
Q ss_pred EcCCCcccCCCCHHHHHHHhhc
Q 019107 218 SKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 218 ~~~~~~l~~G~~~~~av~~~~~ 239 (346)
+.++ .|..++.+...+..
T Consensus 206 ~Hn~----~Gla~an~l~Ai~a 223 (295)
T 1ydn_A 206 YHDT----GGRALDNIRVSLEK 223 (295)
T ss_dssp EBCT----TSCHHHHHHHHHHH
T ss_pred ECCC----cchHHHHHHHHHHh
Confidence 6554 36677777776654
No 83
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=85.96 E-value=3.4 Score=36.40 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=55.3
Q ss_pred HHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCC-----CHHHHHHHhhcCCCceE
Q 019107 173 RVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD-----SILECASIADSCEQVVA 245 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~-----~~~~av~~~~~~~~~~a 245 (346)
+++.+.+.|+|.+.+- .++++.. +.++.+..+ ..+.+++.+....-..+|. +..+.+..+.. .+++.
T Consensus 89 ~~~~~l~~Gad~V~lg~~~l~~p~~---~~~~~~~~g--~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~-~G~~~ 162 (244)
T 1vzw_A 89 TLAAALATGCTRVNLGTAALETPEW---VAKVIAEHG--DKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNK-EGCAR 162 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHH---HHHHHHHHG--GGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHH-TTCCC
T ss_pred HHHHHHHcCCCEEEECchHhhCHHH---HHHHHHHcC--CcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHh-CCCCE
Confidence 4556677899999875 4455543 444445544 4567777765321112222 56666666655 47788
Q ss_pred EEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 246 VGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 246 vGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
|.++...++. -..+++++.+..+.|+++
T Consensus 163 i~~~~~~~~~~~~g~~~~~~~~i~~~~~ipvia 195 (244)
T 1vzw_A 163 YVVTDIAKDGTLQGPNLELLKNVCAATDRPVVA 195 (244)
T ss_dssp EEEEEC-------CCCHHHHHHHHHTCSSCEEE
T ss_pred EEEeccCcccccCCCCHHHHHHHHHhcCCCEEE
Confidence 8887654322 246777777766788765
No 84
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.83 E-value=1.9 Score=38.39 Aligned_cols=86 Identities=20% Similarity=0.275 Sum_probs=55.3
Q ss_pred HHHHHHHhCCCCEEEEccC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 172 RRVLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
++++.+.+.|+|++++-+- .+..++..+++.+++.+ +++++.. .+++++....+ .+++.||+|
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~g--~~v~~~v-----------~t~eea~~a~~--~Gad~Ig~~ 156 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLHG--LLAMADC-----------STVNEGISCHQ--KGIEFIGTT 156 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHTT--CEEEEEC-----------SSHHHHHHHHH--TTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHCC--CEEEEec-----------CCHHHHHHHHh--CCCCEEEec
Confidence 4566677899999987653 24456677777788765 7777644 24666665443 488999975
Q ss_pred CCC------h-hhHHHHHHHHhhhcCCcEEE
Q 019107 250 CTS------P-RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~~------p-~~~~~~l~~l~~~~~~pl~v 273 (346)
-.+ + ..-..+++++.+. +.|+++
T Consensus 157 ~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA 186 (229)
T 3q58_A 157 LSGYTGPITPVEPDLAMVTQLSHA-GCRVIA 186 (229)
T ss_dssp TTTSSSSCCCSSCCHHHHHHHHTT-TCCEEE
T ss_pred CccCCCCCcCCCCCHHHHHHHHHc-CCCEEE
Confidence 321 1 1123667777765 778664
No 85
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=85.82 E-value=15 Score=33.50 Aligned_cols=138 Identities=10% Similarity=-0.045 Sum_probs=79.5
Q ss_pred HHHHHHHHHHhCCCC-EEEEcc-----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 169 FHRRRVLILANSGAD-LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD-~i~~ET-----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
.|.+.++.+.+.|+| +|-+-- ..+++.+..+++++++.- ++|+++-++.. + +-+.+.+.++.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~----~-~~~~~~~~a~~ 180 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKLPPY----F-DLVHFDIMAEI 180 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC----C-SHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHHH
Confidence 455677778889999 886631 126667777888887753 68999876432 1 11233444555
Q ss_pred hhcCCCceEEEECCC--------------------------Ch---hhHHHHHHHHhhhc--CCcEEEeeCCCCcccccc
Q 019107 237 ADSCEQVVAVGINCT--------------------------SP---RFIHGLILSVRKVT--SKPVIIYPNSGETYNAEL 285 (346)
Q Consensus 237 ~~~~~~~~avGvNC~--------------------------~p---~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~~~ 285 (346)
+.+ .++++|-+-.+ ++ ......++++++.. +.|++. +.|.
T Consensus 181 ~~~-~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~--~GGI------ 251 (311)
T 1jub_A 181 LNQ-FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG--TGGI------ 251 (311)
T ss_dssp HTT-SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSC------
T ss_pred HHH-cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE--ECCC------
Confidence 544 47777644322 11 01245666777666 667654 3331
Q ss_pred ccccccCCCChHHHHHHHHHHHHcCCeEEeecCC---CchHHHHHHHHHHc
Q 019107 286 KKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCR---TTPNTIKAISRVLS 333 (346)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCG---t~P~hI~al~~~~~ 333 (346)
.++++..+ .+..|+..|+=+-+ -+|..++.|++.+.
T Consensus 252 --------~~~~da~~----~l~~GAd~V~vg~~~l~~~p~~~~~i~~~l~ 290 (311)
T 1jub_A 252 --------ETGQDAFE----HLLCGATMLQIGTALHKEGPAIFDRIIKELE 290 (311)
T ss_dssp --------CSHHHHHH----HHHHTCSEEEECHHHHHHCTHHHHHHHHHHH
T ss_pred --------CCHHHHHH----HHHcCCCEEEEchHHHhcCcHHHHHHHHHHH
Confidence 13444444 34568888764433 36877777666543
No 86
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=85.79 E-value=24 Score=33.33 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=46.5
Q ss_pred HHHHHHHhhcCCCceEEEECCCC---------h-----------------hhHHHHHHHHhhhcC-CcEEEeeCCCCccc
Q 019107 230 ILECASIADSCEQVVAVGINCTS---------P-----------------RFIHGLILSVRKVTS-KPVIIYPNSGETYN 282 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vypN~g~~~~ 282 (346)
+.++++.+.+ .+.++|=|||.+ | ..+..+++.+++... .|+++.-+.+..++
T Consensus 163 f~~aA~~a~~-aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~ 241 (364)
T 1vyr_A 163 FRQAVANARE-AGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQ 241 (364)
T ss_dssp HHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBT
T ss_pred HHHHHHHHHH-cCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccc
Confidence 3455554444 589999999964 2 135566777777652 38999776653222
Q ss_pred cccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 283 AELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
+.. ....+.+++.+.++.+.+.|+.+|-
T Consensus 242 ~~~-----~~~~~~~~~~~~a~~l~~~G~d~i~ 269 (364)
T 1vyr_A 242 NVD-----NGPNEEADALYLIEELAKRGIAYLH 269 (364)
T ss_dssp TBC-----CCTTHHHHHHHHHHHHHHTTCSEEE
T ss_pred ccc-----CCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 100 0012345566667777777766654
No 87
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=85.11 E-value=25 Score=32.85 Aligned_cols=228 Identities=14% Similarity=0.165 Sum_probs=126.2
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCHHhHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (346)
.+.+.+.-++-++.|-.-|.. |.......++. |-+...-.-++.+|++..|+.. +
T Consensus 58 id~l~~~~~~~~~~Gi~~v~L--Fgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~--------------------p-- 113 (330)
T 1pv8_A 58 VKRLEEMLRPLVEEGLRCVLI--FGVPSRVPKDERGSAADSEESPAIEAIHLLRKTF--------------------P-- 113 (330)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE--EECC--------------CCSHHHHHHHHHHHHS--------------------T--
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecCCcccCCCccccccCCCCChHHHHHHHHHHHC--------------------C--
Confidence 366777778889999886654 44422211211 2111111237777787766552 1
Q ss_pred CcEEEE--ecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCC
Q 019107 133 PVLVAA--SVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI 210 (346)
Q Consensus 133 ~~~VaG--siGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~ 210 (346)
..+|.. |+-||-+.=++|---. ...++-++-.+...+|+-...++|+|++.==.|.+- .+.+|.+++.+.|..-
T Consensus 114 dl~vitDvcLc~YT~HGHcGil~~---~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMMDG-rV~aIR~aLd~~G~~~ 189 (330)
T 1pv8_A 114 NLLVACDVCLCPYTSHGHCGLLSE---NGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDG-RVEAIKEALMAHGLGN 189 (330)
T ss_dssp TSEEEEEECCC------------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CC-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccccCCCceeEECC---CCcCccHHHHHHHHHHHHHHHHcCCCeeeccccccc-HHHHHHHHHHhCCCcC
Confidence 244444 4556644433332100 012566777788888888889999999996666554 5678888888877532
Q ss_pred -cEEEEEEEcC-------------------CCc--ccCCCCHHHHHHHhh--cCCCceEEEECCCChhhHHHHHHHHhhh
Q 019107 211 -PAWFSFNSKD-------------------GIN--VVSGDSILECASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKV 266 (346)
Q Consensus 211 -pv~is~~~~~-------------------~~~--l~~G~~~~~av~~~~--~~~~~~avGvNC~~p~~~~~~l~~l~~~ 266 (346)
--++|.+.+- +.+ ..|-..-.++++.+. -..|++.|.|-=.-|. +.+++.+++.
T Consensus 190 ~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKPal~Y--LDIi~~vk~~ 267 (330)
T 1pv8_A 190 RVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPY--LDIVREVKDK 267 (330)
T ss_dssp TCEEBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGG--HHHHHHHHHH
T ss_pred CceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEecCccH--HHHHHHHHHh
Confidence 2333444321 111 223334455655442 2357899998766443 5677777777
Q ss_pred c-CCcEEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 267 T-SKPVIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 267 ~-~~pl~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
+ ..|+.+|--+|+. .-...+.|... ...+.|....++.+|+.+|=
T Consensus 268 ~p~~P~aaYqVSGEYAMikaAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 316 (330)
T 1pv8_A 268 HPDLPLAVYHVSGEFAMLWHGAQAGAFDL----KAAVLEAMTAFRRAGADIII 316 (330)
T ss_dssp STTSCEEEEECHHHHHHHHHHHHTTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred cCCCCeEEEEcCcHHHHHHHHHHcCCccH----HHHHHHHHHHHHhcCCCEEe
Confidence 7 8999999998862 11122456542 23477777888899998873
No 88
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=85.09 E-value=0.81 Score=42.64 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
--+|++++.++|+|.|++|.+++.+|++.+++.++ .|+++.++
T Consensus 173 ai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~~~-----~Pl~~n~~ 215 (298)
T 3eoo_A 173 AIERAIAYVEAGADMIFPEAMKTLDDYRRFKEAVK-----VPILANLT 215 (298)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHHHC-----SCBEEECC
T ss_pred HHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHHcC-----CCeEEEec
Confidence 34588889999999999999999999998887653 88887764
No 89
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=85.04 E-value=11 Score=34.44 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=59.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCC--------CHHHH----HHHHHHHHHhCCCCcEEEEEEEcCCCccc-CCC
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIP--------NKLEA----KAYAELLEEEGITIPAWFSFNSKDGINVV-SGD 228 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--------~~~E~----~a~~~a~~~~~~~~pv~is~~~~~~~~l~-~G~ 228 (346)
+.+++.+ -++.|.++|++.+-+|-.. +.+|. ++++++.++.+ .|++|.-.. +..+. .|.
T Consensus 90 ~~~~~~~----~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g--~~~~i~aRt--da~~~~~g~ 161 (275)
T 2ze3_A 90 APEDVRR----TVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASG--VPVFLNART--DTFLKGHGA 161 (275)
T ss_dssp SHHHHHH----HHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHT--SCCEEEEEC--CTTTTTCSS
T ss_pred CHHHHHH----HHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcC--CCeEEEEec--hhhhccccc
Confidence 4455544 3555667999999999764 33344 44444433335 787766543 33221 122
Q ss_pred ----CHHHHHHHhhc--CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEe
Q 019107 229 ----SILECASIADS--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 229 ----~~~~av~~~~~--~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vy 274 (346)
.+.++++.+.. ..|+++|-+-|.. ++.+..+.+. .+.|+.+-
T Consensus 162 ~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~----~~~P~n~~ 210 (275)
T 2ze3_A 162 TDEERLAETVRRGQAYADAGADGIFVPLALQSQDIRALADA----LRVPLNVM 210 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHH----CSSCEEEE
T ss_pred cchhhHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHh----cCCCEEEe
Confidence 46777776532 2589999999974 4555555444 46887543
No 90
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=84.88 E-value=9 Score=34.09 Aligned_cols=103 Identities=14% Similarity=0.001 Sum_probs=63.9
Q ss_pred HHHHHHHHHhC-CCCEEEEccCC--CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE
Q 019107 170 HRRRVLILANS-GADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (346)
Q Consensus 170 ~~~~i~~l~~~-gvD~i~~ET~~--~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av 246 (346)
|.+.++...+. ++|++=+|-.. .-...+.+++.+++.+ ..+++|+.-- ..+++-+.+.+.+..+.. .+++.+
T Consensus 85 ~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~~~l~~~~~~~~--~kvI~S~Hdf--~~tp~~~el~~~~~~~~~-~gaDiv 159 (238)
T 1sfl_A 85 YLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYN--KEVIISHHNF--ESTPPLDELQFIFFKMQK-FNPEYV 159 (238)
T ss_dssp HHHHHHHGGGCTTCCEEEEECCTTSCHHHHHHHHHHHHHTT--CEEEEEEEES--SCCCCHHHHHHHHHHHHT-TCCSEE
T ss_pred HHHHHHHHHHhCCCCEEEEEccCCCChHHHHHHHHHHHhcC--CEEEEEecCC--CCCcCHHHHHHHHHHHHH-cCCCEE
Confidence 33445556655 69999999766 5555677777777654 8899999632 122233334444555544 467776
Q ss_pred EECCC--ChhhHHHHHHHHh---hhcCCcEEEeeCC
Q 019107 247 GINCT--SPRFIHGLILSVR---KVTSKPVIIYPNS 277 (346)
Q Consensus 247 GvNC~--~p~~~~~~l~~l~---~~~~~pl~vypN~ 277 (346)
=+-+. +++....+++... ...+.|++++.-+
T Consensus 160 Kia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 160 KLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred EEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 66665 4666666665433 3357899888643
No 91
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=84.73 E-value=13 Score=36.20 Aligned_cols=39 Identities=41% Similarity=0.372 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFET-IPNKLEAKAYAELLEE 205 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~ 205 (346)
..++..+ |..++.+ |+|+|++|+ .++++|++.++++++.
T Consensus 269 gldeAI~----Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~ 308 (439)
T 3i4e_A 269 GLEQAIS----RGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHK 308 (439)
T ss_dssp SHHHHHH----HHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHH----HHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 4555543 7778887 999999999 6899999999999886
No 92
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=83.94 E-value=13 Score=34.91 Aligned_cols=152 Identities=15% Similarity=0.068 Sum_probs=92.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------CHH-H---HHHHHHHHHH-hCCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEE-EGITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~~-E---~~a~~~a~~~-~~~~~ 210 (346)
++|.+|+ .+.|.+.++.+.++|.|.|=+--- | +++ . +..+++++++ .+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4666654 556777888888899998843211 1 121 2 3445566666 35568
Q ss_pred cEEEEEEEcCCCcccCCCCHHHHHHHh---hcCCCceEEEECCC----------ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 211 PAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCT----------SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 211 pv~is~~~~~~~~l~~G~~~~~av~~~---~~~~~~~avGvNC~----------~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
||.+-++..+. ...|.++.++++.+ .+ .+++.|-+-+. .+..-..+++.+++..+.|+++ +.
T Consensus 221 pV~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~G 295 (349)
T 3hgj_A 221 PLFVRVSATDW--GEGGWSLEDTLAFARRLKE-LGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA--VG 295 (349)
T ss_dssp CEEEEEESCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE--CS
T ss_pred eEEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE--EC
Confidence 99998886543 23577777765544 33 47888877652 1223456777777777888765 22
Q ss_pred CCccccccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHHHHcC
Q 019107 278 GETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISRVLSN 334 (346)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~~~~~ 334 (346)
| + .++++ +.+.++.| +.+|+=+-. .+|+-.+++++.+..
T Consensus 296 g-i-------------~t~e~----a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~l~~ 337 (349)
T 3hgj_A 296 L-I-------------TTPEQ----AETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGV 337 (349)
T ss_dssp S-C-------------CCHHH----HHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTC
T ss_pred C-C-------------CCHHH----HHHHHHCCCceEEEecHHHHhCchHHHHHHHHCCC
Confidence 2 1 12333 23466677 777774333 478888888888763
No 93
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=83.77 E-value=1.2 Score=41.41 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=34.8
Q ss_pred HHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEE
Q 019107 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFS 215 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is 215 (346)
++++++.++|+|.|++|. +|+.+|++.+.+.++. ..|+++.
T Consensus 174 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~---~~P~i~~ 215 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNN---QGPVVIV 215 (295)
T ss_dssp HHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTT---CSCEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCC---CCCEEEe
Confidence 488899999999999998 8999999998887752 4888765
No 94
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=83.56 E-value=0.66 Score=43.37 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
-++++++.++|+|.|++|.+++.+|++.+.+.+ +.|+++.++
T Consensus 178 i~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~-----~~P~~~n~~ 219 (305)
T 3ih1_A 178 IERANAYVKAGADAIFPEALQSEEEFRLFNSKV-----NAPLLANMT 219 (305)
T ss_dssp HHHHHHHHHHTCSEEEETTCCSHHHHHHHHHHS-----CSCBEEECC
T ss_pred HHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHc-----CCCEEEeec
Confidence 347888999999999999999999988777754 378876653
No 95
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=83.48 E-value=4 Score=39.44 Aligned_cols=81 Identities=26% Similarity=0.360 Sum_probs=56.8
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHH---hCCCCcEEEEEEEcC--------------------CCcccCC
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEE---EGITIPAWFSFNSKD--------------------GINVVSG 227 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~---~~~~~pv~is~~~~~--------------------~~~l~~G 227 (346)
-.||..|.++|+|++=+ |+|+.++++++-+..++ .+.+.|++.-|.|+. .|++-++
T Consensus 41 v~QI~~L~~aG~eiVRv-aVp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRL-TVNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEE-ECCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEE-ecCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 35889999999999986 68999998887665433 456799999888752 1222222
Q ss_pred ----CCHHHHHHHhhcCCCceEEEECCCC
Q 019107 228 ----DSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 228 ----~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
+-+.++++.+....-+.=||+|..+
T Consensus 120 ~k~~e~~~~vv~~ak~~~~pIRIGVN~GS 148 (406)
T 4g9p_A 120 RHKDEHFAEMIRIAMDLGKPVRIGANWGS 148 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEGGG
T ss_pred ccHHHHHHHHHHHHHHccCCceecccccc
Confidence 2245666666554457889999975
No 96
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=83.32 E-value=30 Score=32.50 Aligned_cols=229 Identities=18% Similarity=0.224 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCHHhHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (346)
.+.+.+.-++-++.|-.-|.. |.......++. |-+...-.-++.+|++..|++. .
T Consensus 72 id~l~~~~~~~~~lGi~av~L--Fgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~--------------------P-- 127 (356)
T 3obk_A 72 MEDLLKEVGEARSYGIKAFML--FPKVDDELKSVMAEESYNPDGLLPRAIMALKEAF--------------------P-- 127 (356)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--EEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHS--------------------T--
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccccccCCCChHHHHHHHHHHHC--------------------C--
Confidence 456666667788999886554 34322222221 2111011247777777666542 1
Q ss_pred CcEEEEe--cCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCC
Q 019107 133 PVLVAAS--VGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI 210 (346)
Q Consensus 133 ~~~VaGs--iGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~ 210 (346)
..+|... +-||-+.=++|-=-. . ...++-++-.+...+|+-...++|+|++.==.|.+- .+.+|.+++.+.|..-
T Consensus 128 ~l~VitDVcLc~YT~HGHcGil~~-~-~g~V~ND~Tl~~Lak~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~ 204 (356)
T 3obk_A 128 DVLLLADVALDPYSSMGHDGVVDE-Q-SGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDG-RVSAIRESLDMEGCTD 204 (356)
T ss_dssp TCEEEEEECSGGGBTTCCSSCBCT-T-TCCBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTT-HHHHHHHHHHHTTCTT
T ss_pred CCEEEEeeccccccCCCcceeeeC-C-CCCCCCHHHHHHHHHHHHHHHHcCCCeEeccccccC-HHHHHHHHHHHCCCCC
Confidence 2444444 556654433332111 0 012677888888888988899999999997777665 4677888888877543
Q ss_pred cEEEEEEEcC--------------------CCc--ccCCCCHHHHHHHh--hcCCCceEEEECCCChhhHHHHHHHHhhh
Q 019107 211 PAWFSFNSKD--------------------GIN--VVSGDSILECASIA--DSCEQVVAVGINCTSPRFIHGLILSVRKV 266 (346)
Q Consensus 211 pv~is~~~~~--------------------~~~--l~~G~~~~~av~~~--~~~~~~~avGvNC~~p~~~~~~l~~l~~~ 266 (346)
--++|-+.+= +.+ ..|-..-.+|++.+ +-..|++.|.|-=.-|. +.+++.+++.
T Consensus 205 v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpaN~~EAlrE~~lDi~EGAD~vMVKPal~Y--LDIi~~vk~~ 282 (356)
T 3obk_A 205 TSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPY--LDVLAKIREK 282 (356)
T ss_dssp SEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHHHHHHTTCSEEEEESSGGG--HHHHHHHHHH
T ss_pred cceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCCCHHHHHHHHHhhHhcCCCEEEecCCCcH--HHHHHHHHhc
Confidence 4444665431 111 11222224455443 22257899998766442 5677777777
Q ss_pred cCCcEEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 267 TSKPVIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 267 ~~~pl~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
++.|+.+|--+|+. .-...+.|++. ...+.|....++.+|+.+|=
T Consensus 283 ~~~PvaaYqVSGEYAMikAAa~~GwiD~----~~~v~Esl~~~kRAGAd~Ii 330 (356)
T 3obk_A 283 SKLPMVAYHVSGEYAMLKAAAEKGYISE----KDTVLEVLKSFRRAGADAVA 330 (356)
T ss_dssp CSSCEEEEECHHHHHHHHHHHHHTSSCH----HHHHHHHHHHHHHHTCSEEE
T ss_pred CCCCEEEEEccHHHHHHHHHHHcCCccH----HHHHHHHHHHHHHcCCCEEe
Confidence 89999999999862 11123457542 23467777788888988774
No 97
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=83.20 E-value=9.8 Score=34.35 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=60.7
Q ss_pred HHHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC-
Q 019107 174 VLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT- 251 (346)
Q Consensus 174 i~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~- 251 (346)
++.+.+.+ +|++=+|-...-+-...+++.+++.+ ..+++|+.-- ..+++-+.+.+.+..+.. .+++.+=+-+.
T Consensus 105 l~~~~~~~~~d~iDvEl~~~~~~~~~l~~~a~~~~--~kiI~S~Hdf--~~TP~~~el~~~~~~~~~-~gaDIvKia~~~ 179 (258)
T 4h3d_A 105 NKEISNTGLVDLIDVELFMGDEVIDEVVNFAHKKE--VKVIISNHDF--NKTPKKEEIVSRLCRMQE-LGADLPKIAVMP 179 (258)
T ss_dssp HHHHHHTTCCSEEEEEGGGCHHHHHHHHHHHHHTT--CEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTCSEEEEEECC
T ss_pred HHHHHhcCCchhhHHhhhccHHHHHHHHHHHHhCC--CEEEEEEecC--CCCCCHHHHHHHHHHHHH-hCCCEEEEEEcc
Confidence 33444444 99999998766666677777777754 8999999632 223343445555555544 46676666664
Q ss_pred -ChhhHHHHHHHHhh----hcCCcEEEeeC
Q 019107 252 -SPRFIHGLILSVRK----VTSKPVIIYPN 276 (346)
Q Consensus 252 -~p~~~~~~l~~l~~----~~~~pl~vypN 276 (346)
+++....+++...+ +.+.|++.+.=
T Consensus 180 ~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~M 209 (258)
T 4h3d_A 180 QNEKDVLVLLEATNEMFKIYADRPIITMSM 209 (258)
T ss_dssp SSHHHHHHHHHHHHHHHHHTCSSCBEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 56666666654332 24689877653
No 98
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=82.90 E-value=28 Score=31.72 Aligned_cols=152 Identities=16% Similarity=0.095 Sum_probs=84.8
Q ss_pred ChHHHHHHHHHHHHhhcceeecc-ccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|..+ |-+-. . -++.++-.++.+.+++.+ .+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 68 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGES-P-----TLSKSEHEQVVEITIKTA------------------------NG 68 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 56788888888899999966543 32211 1 234455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |.. +.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 69 r~pviaGv-g~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (292)
T 2vc6_A 69 RVPVIAGA-GSN------------------STAEAIA----FVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAS 125 (292)
T ss_dssp SSCBEEEC-CCS------------------SHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEec-CCc------------------cHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 33466772 221 3344433 566677799999987652 37778877777766654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
++|+++==.. .++--.-+.+...+..+...++.+|=--|.....+..+++
T Consensus 126 -~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnIvgiK~s~gd~~~~~~~~~ 175 (292)
T 2vc6_A 126 -TIPIIVYNIP---GRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPSLERM 175 (292)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHH
T ss_pred -CCCEEEEeCc---cccCcCCCHHHHHHHHhhCCCEEEEecCCCCHHHHHHHHH
Confidence 6999853211 1111123445444444313455444444444555555543
No 99
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=82.86 E-value=20 Score=30.99 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=70.2
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++++...+.|+|++..-- .+ ..++++.++.+ .|+++.+ .++.++..... .+++.|++ .
T Consensus 74 d~~~~A~~~GAd~v~~~~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~--f 131 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-LL----EEVAALAQARG--VPYLPGV-----------LTPTEVERALA--LGLSALKF--F 131 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-CC----HHHHHHHHHHT--CCEEEEE-----------CSHHHHHHHHH--TTCCEEEE--T
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEecC-----------CCHHHHHHHHH--CCCCEEEE--e
Confidence 466777788999997542 22 23555666665 7877653 14677776554 47899998 2
Q ss_pred Chhh--HHHHHHHHhhhc-CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEee---cCCCchHHH
Q 019107 252 SPRF--IHGLILSVRKVT-SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGG---CCRTTPNTI 325 (346)
Q Consensus 252 ~p~~--~~~~l~~l~~~~-~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGG---CCGt~P~hI 325 (346)
+.+. -...|+.++... +.|++ |-.|. +++ .+.+|++.|+..++. =|.-+++.|
T Consensus 132 pa~~~gG~~~lk~l~~~~~~ipvv--aiGGI---------------~~~----n~~~~l~aGa~~vavgSai~~~d~~~i 190 (207)
T 2yw3_A 132 PAEPFQGVRVLRAYAEVFPEVRFL--PTGGI---------------KEE----HLPHYAALPNLLAVGGSWLLQGNLEAV 190 (207)
T ss_dssp TTTTTTHHHHHHHHHHHCTTCEEE--EBSSC---------------CGG----GHHHHHTCSSBSCEEESGGGSSCHHHH
T ss_pred cCccccCHHHHHHHHhhCCCCcEE--EeCCC---------------CHH----HHHHHHhCCCcEEEEehhhhCCCHHHH
Confidence 2121 246677777655 56754 43442 222 234578777544332 133456667
Q ss_pred HHHHHHHcC
Q 019107 326 KAISRVLSN 334 (346)
Q Consensus 326 ~al~~~~~~ 334 (346)
++.++.+..
T Consensus 191 ~~~a~~~~~ 199 (207)
T 2yw3_A 191 RAKVRAAKA 199 (207)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666543
No 100
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=82.76 E-value=14 Score=36.54 Aligned_cols=64 Identities=14% Similarity=0.105 Sum_probs=40.7
Q ss_pred HHHHHhCCCCEEEEc-----c----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 174 VLILANSGADLIAFE-----T----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 174 i~~l~~~gvD~i~~E-----T----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
++.+.++|+|+|.+. . .|.+.-+..+.+++++.+ +|++.+--+ .+..++++.+.
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~--iPVIa~GGI---------~~~~di~kala 354 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYG--IPVIADGGI---------RFSGDISKAIA 354 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGT--CCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCC--CeEEEeCCC---------CCHHHHHHHHH
Confidence 455777899999874 1 355555555666666654 999965421 24567776664
Q ss_pred cCCCceEEEECC
Q 019107 239 SCEQVVAVGINC 250 (346)
Q Consensus 239 ~~~~~~avGvNC 250 (346)
.+++++++--
T Consensus 355 --~GAd~V~iGs 364 (496)
T 4fxs_A 355 --AGASCVMVGS 364 (496)
T ss_dssp --TTCSEEEEST
T ss_pred --cCCCeEEecH
Confidence 3677777754
No 101
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=82.68 E-value=14 Score=35.11 Aligned_cols=78 Identities=14% Similarity=0.013 Sum_probs=45.4
Q ss_pred HHHHHHHhhcCCCceEEEECCCC---------h-----------------hhHHHHHHHHhhhcC-CcEEEeeCCCCccc
Q 019107 230 ILECASIADSCEQVVAVGINCTS---------P-----------------RFIHGLILSVRKVTS-KPVIIYPNSGETYN 282 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vypN~g~~~~ 282 (346)
+.++++.+.+ .+.++|=|||.+ | ..+..+++.+++... .|+++.-+....++
T Consensus 169 f~~AA~~a~~-aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 169 FRVAARNAIE-AGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHH-TTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHH-cCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 4455555544 589999999964 2 124556667766653 38998877643221
Q ss_pred cccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 283 AELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+. .. ..+.+++.+.++.+.+.|+.+|
T Consensus 248 g~----~~--~~~~~~~~~la~~le~~Gvd~i 273 (376)
T 1icp_A 248 EA----GD--TNPTALGLYMVESLNKYDLAYC 273 (376)
T ss_dssp TC----CC--SCHHHHHHHHHHHHGGGCCSEE
T ss_pred CC----CC--CCCHHHHHHHHHHHHHcCCCEE
Confidence 10 00 1123456677777767776655
No 102
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=82.63 E-value=6.5 Score=36.30 Aligned_cols=159 Identities=11% Similarity=0.020 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EEccCC--CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLI-----AFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i-----~~ET~~--~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
+.+.+.+|.+..++.+.+ .|.++ +||.+. -+.+++..++.+++.+ .+|+.=+-+.|=++ +...++
T Consensus 41 ~~~~l~~f~~~ivd~l~~-~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~g--~~VflDlK~~DIpn-----Tv~~~a 112 (290)
T 3r89_A 41 VSEALFSYNKEIIDQTYD-VCAIYKLQIAYYESYGIEGMIAYRDTLSYLREKD--LLSIGDVKRSDIAA-----SAKMYA 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT-SCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTT--CCEEEEEEECCCHH-----HHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-cceEEEecHHHHHhcCHHHHHHHHHHHHHHHHCC--CeEEEEecccCcHH-----HHHHHH
Confidence 367788888988888764 44444 344321 1235555667777765 89998887755443 344455
Q ss_pred HHhhc-CCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEE--eeCCC--CccccccccccccCCCChHHHHHHHHHHHH
Q 019107 235 SIADS-CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVII--YPNSG--ETYNAELKKWVESTGVRDEDFVSYIGKWRD 308 (346)
Q Consensus 235 ~~~~~-~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~v--ypN~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (346)
+.+-. ..+++++-|++. +.+.+.++++...+..+..+++ .-|.| .+.+.. ... ..--+..++.+++|-.
T Consensus 113 ~~~~~~~lg~D~vTvh~~~G~~~l~~~~~~a~~~~kgv~vL~~tSn~g~~d~q~~~----~~~-g~l~~~V~~~a~~~~~ 187 (290)
T 3r89_A 113 KAHFEGDFETDFITLNPYMGMDSIEPYEEYIEKGDKGVFVLLRTSNPGAKDFEVLP----VDG-EEFFYKVGDKMRELNE 187 (290)
T ss_dssp HHHHSGGGCCSEEEECCTTCGGGTGGGHHHHHTTSCEEEEEEECCSGGGGTTTTCE----ETT-EETHHHHHHHHHHHHG
T ss_pred HHHhccccCCCEEEEcccCCHHHHHHHHHHHHhcCCeEEEEEeCCCCCHHHHhhcc----cCC-CCHHHHHHHHHHHHhh
Confidence 44323 147899999987 6788888887765543333222 22322 111100 000 0012446777777864
Q ss_pred c--C---CeEEeecCCC-chHHHHHHHHHHc
Q 019107 309 A--G---ASLFGGCCRT-TPNTIKAISRVLS 333 (346)
Q Consensus 309 ~--G---~~ivGGCCGt-~P~hI~al~~~~~ 333 (346)
. | ...+|-=||. -|+.++.|++.+.
T Consensus 188 ~~~g~~~~g~~GvVvgAT~p~e~~~iR~~~~ 218 (290)
T 3r89_A 188 KYIGKSGFGPIGLVVGATHSEEVEKIRKRYD 218 (290)
T ss_dssp GGCCTTSCEEEEEEECCCCHHHHHHHHHHTT
T ss_pred hccCCCCCCceEEEECCCChHHHHHHHHhCC
Confidence 2 3 2367777774 5999999998764
No 103
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=82.51 E-value=13 Score=31.65 Aligned_cols=89 Identities=12% Similarity=0.174 Sum_probs=56.4
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC-
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS- 252 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~- 252 (346)
++.+.++|+|++++=..+..+.+..+++.+++.+ +++.+.+. .-++..+.+..+.. .+++.|.+|-.-
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g--~~~~v~~~--------~~~t~~~~~~~~~~-~g~d~i~v~~g~~ 138 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAG--KQVVVDMI--------CVDDLPARVRLLEE-AGADMLAVHTGTD 138 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-HTCCEEEEECCHH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcC--CeEEEEec--------CCCCHHHHHHHHHH-cCCCEEEEcCCCc
Confidence 6677889999999987776666788888899876 77776431 11234444444444 367778776320
Q ss_pred ----hhhHHHHHHHHhhhc-CCcEEE
Q 019107 253 ----PRFIHGLILSVRKVT-SKPVII 273 (346)
Q Consensus 253 ----p~~~~~~l~~l~~~~-~~pl~v 273 (346)
+......++++++.. +.|+.+
T Consensus 139 g~~~~~~~~~~i~~l~~~~~~~~i~~ 164 (211)
T 3f4w_A 139 QQAAGRKPIDDLITMLKVRRKARIAV 164 (211)
T ss_dssp HHHTTCCSHHHHHHHHHHCSSCEEEE
T ss_pred ccccCCCCHHHHHHHHHHcCCCcEEE
Confidence 111345667777664 567655
No 104
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=82.26 E-value=17 Score=39.94 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=64.3
Q ss_pred HHHHHHhCCCCEE-EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCC----CCHH---HHHHHhhcCCCce
Q 019107 173 RVLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG----DSIL---ECASIADSCEQVV 244 (346)
Q Consensus 173 ~i~~l~~~gvD~i-~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G----~~~~---~av~~~~~~~~~~ 244 (346)
-++...++|+|.+ +|-...++..++..++.+++.+ +.+-..+++..+ ..|+ .++. +.++.+.+ .+++
T Consensus 650 ~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g--~~v~~~i~~~~~--~~d~~r~~~~~~~~~~~~~~~~~-~Ga~ 724 (1165)
T 2qf7_A 650 FVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEEN--KLCEAAICYTGD--ILNSARPKYDLKYYTNLAVELEK-AGAH 724 (1165)
T ss_dssp HHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEEECCSC--TTCTTSGGGCHHHHHHHHHHHHH-TTCS
T ss_pred HHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhcc--ceEEEEEEEecc--ccCCCCCCCCHHHHHHHHHHHHH-cCCC
Confidence 4556667899987 4556677888888899999877 444444433211 1122 3444 34444434 4777
Q ss_pred EEEECC----CChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 245 AVGINC----TSPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 245 avGvNC----~~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
.|.+-= ..|..+..+++.+++..+.|+.+...
T Consensus 725 ~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~H 760 (1165)
T 2qf7_A 725 IIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHTH 760 (1165)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred EEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEEC
Confidence 776653 34999999999998877888877653
No 105
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=81.67 E-value=15 Score=35.02 Aligned_cols=66 Identities=12% Similarity=0.064 Sum_probs=43.0
Q ss_pred HHHHHHHHhCCCCEEEEccCC-CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++++.+.++|+|+|.+.|.. +..+....++.+++...+.|+++.. ..+.+++....+ .++++|.+
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~----------v~t~e~A~~a~~--aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeee----------eCCHHHHHHHHH--cCCCEEEE
Confidence 356888999999999987643 3345555566666653258887742 124566665544 36788877
No 106
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=81.55 E-value=32 Score=33.79 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+++.+.++.+.+.|+|.|.+- |. ..+.++..+++++++.- + +-++|.+.++. |..++.++..++
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~-~--~~i~~H~Hnd~----GlAvAN~laAv~ 224 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV-D--VELHLHCHSTA----GLADMTLLKAIE 224 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC-C--SCEEEEECCTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc-C--CeEEEEECCCC----ChHHHHHHHHHH
Confidence 466677888889999999764 43 37889999999998752 3 44677777654 445555555443
No 107
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=81.35 E-value=41 Score=32.68 Aligned_cols=39 Identities=31% Similarity=0.421 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI-PNKLEAKAYAELLEE 205 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~ 205 (346)
..++..+ |..++.+ |+|+|++|+. ++++|++.+++.++.
T Consensus 264 gld~AI~----Ra~AY~~-GAD~If~e~~~~~~eei~~f~~~v~~ 303 (433)
T 3eol_A 264 GIEPCIA----RAIAYAP-YCDLIWMETSKPDLAQARRFAEAVHK 303 (433)
T ss_dssp SHHHHHH----HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHH----HHHHHHh-cCCEEEEeCCCCCHHHHHHHHHHhcc
Confidence 3455443 7778887 9999999996 899999999999986
No 108
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=81.28 E-value=20 Score=34.50 Aligned_cols=74 Identities=9% Similarity=-0.007 Sum_probs=44.8
Q ss_pred HHHHHHHhhcCCCceEEEECCCC---------h-----------------hhHHHHHHHHhhhcC-CcEEEeeCCCCccc
Q 019107 230 ILECASIADSCEQVVAVGINCTS---------P-----------------RFIHGLILSVRKVTS-KPVIIYPNSGETYN 282 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~~---------p-----------------~~~~~~l~~l~~~~~-~pl~vypN~g~~~~ 282 (346)
+.+++..+.+ .+.++|=|||.+ | ..+..+++.+++... .|+++.-+.+..++
T Consensus 173 f~~AA~~a~~-AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 173 YRRSALNAIE-AGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHH-TTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHH-cCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 3455555544 589999999964 2 235566677776653 48999877653221
Q ss_pred cccccccccCCCChHHHHHHHHHHHHcC
Q 019107 283 AELKKWVESTGVRDEDFVSYIGKWRDAG 310 (346)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G 310 (346)
+.. ...+.+++.+.++.+.+.|
T Consensus 252 g~~------~~~~~~~~~~la~~le~~G 273 (402)
T 2hsa_B 252 DAM------DSNPLSLGLAVVERLNKIQ 273 (402)
T ss_dssp TCC------CSCHHHHHHHHHHHHHHHH
T ss_pred CCC------CCCCHHHHHHHHHHHHhcC
Confidence 110 0123456777777777777
No 109
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=81.27 E-value=1.2 Score=41.26 Aligned_cols=42 Identities=21% Similarity=0.186 Sum_probs=34.4
Q ss_pred HHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
++++++.++|+|.|++|. +++.+|++.+.+.++ .+.|+++..
T Consensus 170 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~---~~vP~i~n~ 212 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP---GKVPLVLVP 212 (290)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC---CSSCEEECG
T ss_pred HHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC---CCCCEEEec
Confidence 378899999999999999 999999988877654 248877643
No 110
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.81 E-value=2.4 Score=38.89 Aligned_cols=39 Identities=28% Similarity=0.285 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
-.++++++.++|+|.|++|.+|+.+|++.+.+.+ +.|+-
T Consensus 170 ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (275)
T 2ze3_A 170 TVRRGQAYADAGADGIFVPLALQSQDIRALADAL-----RVPLN 208 (275)
T ss_dssp HHHHHHHHHHTTCSEEECTTCCCHHHHHHHHHHC-----SSCEE
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence 4458889999999999999999999998877754 37763
No 111
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=80.57 E-value=9.5 Score=34.40 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHHHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcC
Q 019107 162 SLETLKEFHRRRVLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~ 240 (346)
+.++..+. ++...+.| +|++=+|-...- ..+.+++.+++.+ ..+++|+.-- ..+++-+.+.+.+..+..
T Consensus 98 ~~~~~~~l----l~~~~~~g~~d~iDvEl~~~~-~~~~l~~~~~~~~--~kvI~S~Hdf--~~tP~~~el~~~~~~~~~- 167 (257)
T 2yr1_A 98 NEAEVRRL----IEAICRSGAIDLVDYELAYGE-RIADVRRMTEECS--VWLVVSRHYF--DGTPRKETLLADMRQAER- 167 (257)
T ss_dssp CHHHHHHH----HHHHHHHTCCSEEEEEGGGTT-HHHHHHHHHHHTT--CEEEEEEEES--SCCCCHHHHHHHHHHHHH-
T ss_pred CHHHHHHH----HHHHHHcCCCCEEEEECCCCh-hHHHHHHHHHhCC--CEEEEEecCC--CCCcCHHHHHHHHHHHHh-
Confidence 55544444 44455556 999999965433 5666777667644 8899999632 122232334444554544
Q ss_pred CCceEEEECCC--ChhhHHHHHHHH---hhhcCCcEEEeeCC
Q 019107 241 EQVVAVGINCT--SPRFIHGLILSV---RKVTSKPVIIYPNS 277 (346)
Q Consensus 241 ~~~~avGvNC~--~p~~~~~~l~~l---~~~~~~pl~vypN~ 277 (346)
.+++.+=+-+. +++....+++.. +...+.|++.+.-+
T Consensus 168 ~gaDivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 168 YGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp TTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred cCCCEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 46676666664 466666666543 33356899888643
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=80.23 E-value=17 Score=36.03 Aligned_cols=64 Identities=14% Similarity=0.132 Sum_probs=40.0
Q ss_pred HHHHHhCCCCEEEEc----c-----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
++.+.++|+|+|.+- + .|.+..+..+.+++++.+ +||+.+--+ .+..++++.+.
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~--iPVIa~GGI---------~~~~di~kala 379 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHG--IPVIADGGI---------KYSGDMVKALA 379 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTT--CCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCC--CcEEEeCCC---------CCHHHHHHHHH
Confidence 455777899999851 1 455555555566666644 999976422 24456666654
Q ss_pred cCCCceEEEECC
Q 019107 239 SCEQVVAVGINC 250 (346)
Q Consensus 239 ~~~~~~avGvNC 250 (346)
.+++++++-=
T Consensus 380 --~GA~~V~vGs 389 (511)
T 3usb_A 380 --AGAHVVMLGS 389 (511)
T ss_dssp --TTCSEEEEST
T ss_pred --hCchhheecH
Confidence 3677777754
No 113
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=80.13 E-value=10 Score=36.09 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=51.4
Q ss_pred CCcEEEEEEEcCCCcccCCCCHHHHH---HHhhcCCCceEEEECCCCh-----------hhHHHHHHHHhhh-------c
Q 019107 209 TIPAWFSFNSKDGINVVSGDSILECA---SIADSCEQVVAVGINCTSP-----------RFIHGLILSVRKV-------T 267 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~~~av---~~~~~~~~~~avGvNC~~p-----------~~~~~~l~~l~~~-------~ 267 (346)
+.|+.+++.-... +..++++.+ +.+.. .+++|=|||++| +.+..+++.+++. .
T Consensus 146 ~~pv~vniggn~~----t~~~~~dy~~~~~~~~~--~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~ 219 (367)
T 3zwt_A 146 GLPLGVNLGKNKT----SVDAAEDYAEGVRVLGP--LADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVH 219 (367)
T ss_dssp TCCEEEEECCCTT----CSCHHHHHHHHHHHHGG--GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CceEEEEEecCCC----CCcCHHHHHHHHHHHhh--hCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccC
Confidence 4899999932111 133444444 44432 478999999754 3455666666543 5
Q ss_pred CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 268 SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 268 ~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+.|+.+.-..+ ++.+++.+.++...+.|+..|
T Consensus 220 ~~Pv~vKi~p~---------------~~~~~~~~ia~~~~~aGadgi 251 (367)
T 3zwt_A 220 RPAVLVKIAPD---------------LTSQDKEDIASVVKELGIDGL 251 (367)
T ss_dssp CCEEEEEECSC---------------CCHHHHHHHHHHHHHHTCCEE
T ss_pred CceEEEEeCCC---------------CCHHHHHHHHHHHHHcCCCEE
Confidence 78988874321 234667777777777776543
No 114
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=79.64 E-value=41 Score=31.54 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=76.9
Q ss_pred HHHHhCCCCEEEEccCCC-----------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCC----------HHHH
Q 019107 175 LILANSGADLIAFETIPN-----------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS----------ILEC 233 (346)
Q Consensus 175 ~~l~~~gvD~i~~ET~~~-----------~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~----------~~~a 233 (346)
+.+.+.|+|.+-+=-... +..+..+.+.+++.+ +|+++-+-..+.. ..+-.+ +..+
T Consensus 117 e~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~G--iPlllEil~y~~~-~~~~~~~~~a~~~p~~V~~a 193 (332)
T 3iv3_A 117 KRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAED--IPFFLEILTYDET-ISNNSSVEFAKVKVHKVNDA 193 (332)
T ss_dssp HHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEECBTT-BSCTTSHHHHTTHHHHHHHH
T ss_pred HHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcC--CceEEEEeccCCC-CCCCcchhhhccCHHHHHHH
Confidence 334558899885544432 224444556667766 9999877553332 111122 4555
Q ss_pred HHHhh-cCCCceEEEECCC-ChhhH------------H---HHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCCh
Q 019107 234 ASIAD-SCEQVVAVGINCT-SPRFI------------H---GLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRD 296 (346)
Q Consensus 234 v~~~~-~~~~~~avGvNC~-~p~~~------------~---~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~ 296 (346)
++.+. ...++|.+=++.. .++++ . ..++++......|+++.. +| .+.
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~ls-gG---------------~~~ 257 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLS-AG---------------VSA 257 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEEC-TT---------------CCH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEEC-CC---------------CCH
Confidence 66552 2248999999987 45422 2 235555556678876532 22 235
Q ss_pred HHHHHHHHHHHHcCCeEEeecCC
Q 019107 297 EDFVSYIGKWRDAGASLFGGCCR 319 (346)
Q Consensus 297 ~~~~~~~~~~~~~G~~ivGGCCG 319 (346)
++|.+.++...+.|+..-|=+||
T Consensus 258 ~~fl~~v~~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 258 ELFQETLVFAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCcceEEee
Confidence 77888888888999988888888
No 115
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=79.40 E-value=39 Score=31.19 Aligned_cols=153 Identities=15% Similarity=0.079 Sum_probs=86.4
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~-~~-----Ls~~Er~~v~~~~v~~~------------------------~g 90 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGES-PT-----LTHEEHKRIIELCVEQV------------------------AK 90 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc-cc-----cCHHHHHHHHHHHHHHh------------------------CC
Confidence 4678888888899999996653 332211 12 34455556666555433 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 91 rvpViaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 91 RVPVVAG-AGS------------------NSTSEAVE----LAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAI 147 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcC
Confidence 3345677 222 13455544 56667779999998764 246777777777766654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++==.. +++-..-+++...+..+..+++.+|=--|.....+..+++.
T Consensus 148 -~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~l~~~ 198 (315)
T 3si9_A 148 -SIPIIIYNIP---SRSVIDMAVETMRDLCRDFKNIIGVKDATGKIERASEQREK 198 (315)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHH
T ss_pred -CCCEEEEeCc---hhhCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHH
Confidence 6999854321 12212234454444443245554444444455556555544
No 116
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.39 E-value=34 Score=30.54 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=50.8
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCce-EEEECC-
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV-AVGINC- 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~-avGvNC- 250 (346)
-++.+.++|+|.+++=.+| .+|+...++.+++.+ +.++ .+. .++ ++.+.+........+.. .+.+.-
T Consensus 114 f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~g--l~~i-~l~-~p~------t~~~rl~~ia~~a~gfiy~vs~~g~ 182 (262)
T 2ekc_A 114 FCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYV--LSFV-PLG-APT------STRKRIKLICEAADEMTYFVSVTGT 182 (262)
T ss_dssp HHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTT--CEEC-CEE-CTT------CCHHHHHHHHHHCSSCEEEESSCC-
T ss_pred HHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcC--CcEE-EEe-CCC------CCHHHHHHHHHhCCCCEEEEecCCc
Confidence 3556778999988875554 378888999999876 5442 222 111 23333333232222322 221111
Q ss_pred C-----Ch-hhHHHHHHHHhhhcCCcEEE
Q 019107 251 T-----SP-RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ~-----~p-~~~~~~l~~l~~~~~~pl~v 273 (346)
+ .+ ..+...++.+++.++.|+.+
T Consensus 183 TG~~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (262)
T 2ekc_A 183 TGAREKLPYERIKKKVEEYRELCDKPVVV 211 (262)
T ss_dssp --------CHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCCCCcCcccHHHHHHHHHhhcCCCEEE
Confidence 1 12 44667888888888889766
No 117
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=79.01 E-value=15 Score=35.75 Aligned_cols=39 Identities=31% Similarity=0.356 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFET-IPNKLEAKAYAELLEE 205 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~ 205 (346)
..++..+ |..++.+ |+|+|++|+ .++++|++.+++.++.
T Consensus 265 gld~AI~----Ra~AYa~-gAD~if~e~~~~~~eei~~f~~~v~~ 304 (429)
T 1f8m_A 265 GIEPCIA----RAKAYAP-FADLIWMETGTPDLEAARQFSEAVKA 304 (429)
T ss_dssp SHHHHHH----HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHT
T ss_pred CHHHHHH----HHHHHHh-cCCEEEeCCCCCCHHHHHHHHHHhcc
Confidence 3455443 7788887 899999998 8999999999999885
No 118
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=78.61 E-value=30 Score=29.35 Aligned_cols=95 Identities=15% Similarity=0.049 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCC-HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcC
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPN-KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~-~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~ 240 (346)
+.++..+ .++.+. .++|+|-+-+ |. +.....+++.+++...++|+.+.+-+.+ |. ...++.+..
T Consensus 11 ~~~~~~~----~~~~~~-~~~diie~G~-p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~------~~--~~~~~~~~~- 75 (211)
T 3f4w_A 11 TLPEAMV----FMDKVV-DDVDIIEVGT-PFLIREGVNAIKAIKEKYPHKEVLADAKIMD------GG--HFESQLLFD- 75 (211)
T ss_dssp CHHHHHH----HHHHHG-GGCSEEEECH-HHHHHHTTHHHHHHHHHCTTSEEEEEEEECS------CH--HHHHHHHHH-
T ss_pred CHHHHHH----HHHHhh-cCccEEEeCc-HHHHhccHHHHHHHHHhCCCCEEEEEEEecc------ch--HHHHHHHHh-
Confidence 4555544 445554 5899986654 55 6666677777887633689987765542 21 222444434
Q ss_pred CCceEEEECCCCh-hhHHHHHHHHhhhcCCcEE
Q 019107 241 EQVVAVGINCTSP-RFIHGLILSVRKVTSKPVI 272 (346)
Q Consensus 241 ~~~~avGvNC~~p-~~~~~~l~~l~~~~~~pl~ 272 (346)
.+++++-+-+..+ +.+..+++.+++. ..+++
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~-g~~~~ 107 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEA-GKQVV 107 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHH-TCEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHc-CCeEE
Confidence 4778887776643 5556666666654 34443
No 119
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=78.35 E-value=17 Score=33.10 Aligned_cols=62 Identities=15% Similarity=0.221 Sum_probs=43.8
Q ss_pred HHHHHHhCCCCEEEE--ccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 173 RVLILANSGADLIAF--ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~--ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
|+......|+|.+++ .+++ ..+++.+++.+++.| +.+|+.+ .+.+++...++ .+++.||+|-
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~-~~~l~~l~~~a~~lG--l~~lvev-----------~t~ee~~~A~~--~Gad~IGv~~ 190 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALE-QSVLVSMLDRTESLG--MTALVEV-----------HTEQEADRALK--AGAKVIGVNA 190 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSC-HHHHHHHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--HTCSEEEEES
T ss_pred HHHHHHHcCCCEEEEecccCC-HHHHHHHHHHHHHCC--CcEEEEc-----------CCHHHHHHHHH--CCCCEEEECC
Confidence 455555699999987 4554 567888888888876 8888766 24455544443 3789999995
No 120
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=78.24 E-value=36 Score=31.38 Aligned_cols=145 Identities=16% Similarity=0.167 Sum_probs=72.8
Q ss_pred CcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCC---------CHHHHHHHH---
Q 019107 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP---------NKLEAKAYA--- 200 (346)
Q Consensus 133 ~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~---------~~~E~~a~~--- 200 (346)
+.+|-|-+=-+.+.+.||..| .+.+++.+ +++.+.+.|+|+|=+--.+ ..+|++.++
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI 107 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSY-------NEVDAAVR----HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMI 107 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBH-------HHHHHHHH----HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccccCCcc-------CCHHHHHH----HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 456777776666666665322 13344443 5666777999999766322 266776666
Q ss_pred HHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChh-hHHHHHHHHhhhcCCcEEEeeCCCC
Q 019107 201 ELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPR-FIHGLILSVRKVTSKPVIIYPNSGE 279 (346)
Q Consensus 201 ~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~-~~~~~l~~l~~~~~~pl~vypN~g~ 279 (346)
+++++.- +.|+ |+. .....-+-..++. +++- ||-.+-. ....+++.+.+ .+.|+++.++.|.
T Consensus 108 ~~l~~~~-~vpi--SID---------T~~~~V~~aAl~a--Ga~i--INdvsg~~~d~~m~~~aa~-~g~~vVlmh~~G~ 170 (297)
T 1tx2_A 108 QAVSKEV-KLPI--SID---------TYKAEVAKQAIEA--GAHI--INDIWGAKAEPKIAEVAAH-YDVPIILMHNRDN 170 (297)
T ss_dssp HHHHHHS-CSCE--EEE---------CSCHHHHHHHHHH--TCCE--EEETTTTSSCTHHHHHHHH-HTCCEEEECCCSC
T ss_pred HHHHhcC-CceE--EEe---------CCCHHHHHHHHHc--CCCE--EEECCCCCCCHHHHHHHHH-hCCcEEEEeCCCC
Confidence 5555431 3554 552 2222222222332 3332 3554221 12233333333 3688999888664
Q ss_pred c-cccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 280 T-YNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 280 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
. |+.. ... --+.+.+.+....+.|+.
T Consensus 171 p~y~d~----v~e---v~~~l~~~i~~a~~~GI~ 197 (297)
T 1tx2_A 171 MNYRNL----MAD---MIADLYDSIKIAKDAGVR 197 (297)
T ss_dssp CCCSSH----HHH---HHHHHHHHHHHHHHTTCC
T ss_pred CCcchH----HHH---HHHHHHHHHHHHHHcCCC
Confidence 2 1110 000 013355556666677775
No 121
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=78.09 E-value=41 Score=30.70 Aligned_cols=68 Identities=19% Similarity=0.215 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCc-EEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~p-v~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
+++.+.++.+.+.|+|.|.+- |+ ..+.++...++.+++.-...+ +.++|.+.++. |..++.++..++.
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~----Gla~AN~laA~~a 221 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDL----GMATANALAAIEN 221 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTT----SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCc----ChHHHHHHHHHHh
Confidence 355566777888999998765 43 478899999988887421232 77888888775 5666777766653
No 122
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.03 E-value=27 Score=32.19 Aligned_cols=80 Identities=11% Similarity=0.032 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEcc----------CCCHHHHHHHHHHHHHh--------CCCCcEEEEEEEcCCCccc
Q 019107 164 ETLKEFHRRRVLILANSGADLIAFET----------IPNKLEAKAYAELLEEE--------GITIPAWFSFNSKDGINVV 225 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD~i~~ET----------~~~~~E~~a~~~a~~~~--------~~~~pv~is~~~~~~~~l~ 225 (346)
++..+.|.+.++.+.+ ++|.|-+-- +.+...+..+++++++. +.++|+++-++.. .
T Consensus 149 ~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~--~--- 222 (336)
T 1f76_A 149 EQGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD--L--- 222 (336)
T ss_dssp GGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC--C---
T ss_pred cccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC--C---
Confidence 3455566667776655 899986542 12334445556666553 3358999876421 0
Q ss_pred CCCCHHHHHHHhhcCCCceEEEECC
Q 019107 226 SGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 226 ~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
+-+++.+.++.+.+ .++++|-+-.
T Consensus 223 ~~~~~~~~a~~l~~-~Gvd~i~vsn 246 (336)
T 1f76_A 223 SEEELIQVADSLVR-HNIDGVIATN 246 (336)
T ss_dssp CHHHHHHHHHHHHH-TTCSEEEECC
T ss_pred CHHHHHHHHHHHHH-cCCcEEEEeC
Confidence 11133445555555 4788887644
No 123
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=77.39 E-value=18 Score=31.84 Aligned_cols=30 Identities=23% Similarity=0.383 Sum_probs=25.8
Q ss_pred cCCChHHHHHHHHHHHHhhcceeecccccc
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITASYQA 79 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~a 79 (346)
+.+-|+.|...-+.|.++|||+|+...|..
T Consensus 73 l~DipnTv~~~~~~~~~~gad~vtvh~~~G 102 (228)
T 3m47_A 73 VADIPETNEKICRATFKAGADAIIVHGFPG 102 (228)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSEEEEESTTC
T ss_pred ecccHhHHHHHHHHHHhCCCCEEEEeccCC
Confidence 357899999999999999999999877753
No 124
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=77.05 E-value=39 Score=32.03 Aligned_cols=63 Identities=13% Similarity=0.077 Sum_probs=36.3
Q ss_pred HHHHHhCCCCEEEEc----c-----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++||+.+--+ .+..++++.+.
T Consensus 163 A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~--~iPVIA~GGI---------~~~~di~kala 231 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEY--GIPVIADGGI---------RFSGDISKAIA 231 (366)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGG--TCCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhc--CCeEEEeCCC---------CCHHHHHHHHH
Confidence 445667899999982 1 23333334444444444 4899864311 14456666664
Q ss_pred cCCCceEEEEC
Q 019107 239 SCEQVVAVGIN 249 (346)
Q Consensus 239 ~~~~~~avGvN 249 (346)
.++++|++-
T Consensus 232 --~GAd~V~vG 240 (366)
T 4fo4_A 232 --AGASCVMVG 240 (366)
T ss_dssp --TTCSEEEES
T ss_pred --cCCCEEEEC
Confidence 367777765
No 125
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=76.91 E-value=1.6 Score=40.32 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=31.4
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
++++++.++|+|.|++|.+++.+|++.+.+.+ +.|++
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i 208 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM 208 (287)
T ss_dssp HHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE
Confidence 37889999999999999999999988777643 38887
No 126
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=76.71 E-value=47 Score=30.63 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=84.5
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~-~~-----Ls~~Er~~v~~~~v~~~------------------------~g 92 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEG-AY-----LSDPEWDEVVDFTLKTV------------------------AH 92 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 567888888889999999554 3333311 11 34455556666555543 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 93 rvpViaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 93 RVPTIVS-VSD------------------LTTAKTVR----RAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp SSCBEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3345677 222 13455544 566677799999987532 46778877777776653
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC--ChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~--~p~~~~~~l~~ 262 (346)
++|+++==.. .++--.-+++...+.+.+.++ .+||--+ ....+..+++.
T Consensus 150 -~lPiilYn~P---~~tg~~l~~~~~~~L~a~~pn--IvgiKdssgd~~~~~~~~~~ 200 (315)
T 3na8_A 150 -GVPVMLYNNP---GTSGIDMSVELILRIVREVDN--VTMVKESTGDIQRMHKLRLL 200 (315)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHHHHSTT--EEEEEECSSCHHHHHHHHHH
T ss_pred -CCcEEEEeCc---chhCcCCCHHHHHHHHhcCCC--EEEEECCCCCHHHHHHHHHH
Confidence 5999853311 121122344433333244444 4555554 44555555443
No 127
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=76.64 E-value=33 Score=35.06 Aligned_cols=109 Identities=12% Similarity=0.061 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCC-------------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIP-------------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGI 222 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~-------------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~ 222 (346)
+.+.+..||+++ ...|+.+|+.|... .....+.+.+++++.+ .++++.+.= ...
T Consensus 42 ~~~~~~~~~~~~----a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h-~Gr 114 (690)
T 3k30_A 42 DPSAQASMRKIK----AEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGG--GLAGIELAH-NGM 114 (690)
T ss_dssp CHHHHHHHHHHH----HHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTT--CEEEEEEEC-CGG
T ss_pred ChHHHHHHHHHH----hccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcC--CEEEEEccC-Ccc
Confidence 444444455443 34789999988432 2345566777788766 788888861 000
Q ss_pred c---------------cc-C-----C---------------CCHHHHHHHhhcCCCceEEEECCCChh------------
Q 019107 223 N---------------VV-S-----G---------------DSILECASIADSCEQVVAVGINCTSPR------------ 254 (346)
Q Consensus 223 ~---------------l~-~-----G---------------~~~~~av~~~~~~~~~~avGvNC~~p~------------ 254 (346)
. +. . + +.+.+++..+.. .+.++|=|+|.+..
T Consensus 115 ~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~-aGfDgVeih~a~gy~L~~qFlsp~~N 193 (690)
T 3k30_A 115 NAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIE-AGYDIVYVYGAHGYSGVHHFLSKRYN 193 (690)
T ss_dssp GCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHH-HTCSEEEEEECTTCSHHHHHHCTTTC
T ss_pred cccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEcccccchHHHHhCCCccC
Confidence 0 00 0 1 233455555544 48999999987654
Q ss_pred ---------------hHHHHHHHHhhhc--CCcEEEeeCCC
Q 019107 255 ---------------FIHGLILSVRKVT--SKPVIIYPNSG 278 (346)
Q Consensus 255 ---------------~~~~~l~~l~~~~--~~pl~vypN~g 278 (346)
.+..+++.+++.. +.|+++.-+..
T Consensus 194 ~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~ 234 (690)
T 3k30_A 194 QRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVE 234 (690)
T ss_dssp CCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred CCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcc
Confidence 4556666666664 56888876553
No 128
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=76.45 E-value=25 Score=31.67 Aligned_cols=97 Identities=16% Similarity=0.071 Sum_probs=57.0
Q ss_pred HHHHHHHhCCCCEEEEccCC--------CHHHHHHHHHHHHHh----CCCCcEEEEEEEcCC--CcccCCCCHHHHHHHh
Q 019107 172 RRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEE----GITIPAWFSFNSKDG--INVVSGDSILECASIA 237 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~~~~----~~~~pv~is~~~~~~--~~l~~G~~~~~av~~~ 237 (346)
+-++.|.++|++.+-+|-.. +.+|...-++++++. + .|++|.-..+.. ++-...+.+.++++.+
T Consensus 97 ~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g--~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra 174 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAG--VDVVINGRTDAVKLGADVFEDPMVEAIKRI 174 (255)
T ss_dssp HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECHHHHCTTTSSSHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcC--CCeEEEEEechhhccCCcchHHHHHHHHHH
Confidence 34566777999999999763 334554455554443 5 787766655321 1100012367777655
Q ss_pred hc--CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEe
Q 019107 238 DS--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 238 ~~--~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vy 274 (346)
.. ..|+++|-+-|.. ++. ++.+.+..+.|+.+.
T Consensus 175 ~a~~eAGAd~i~~e~~~~~~~----~~~i~~~~~~P~n~~ 210 (255)
T 2qiw_A 175 KLMEQAGARSVYPVGLSTAEQ----VERLVDAVSVPVNIT 210 (255)
T ss_dssp HHHHHHTCSEEEECCCCSHHH----HHHHHTTCSSCBEEE
T ss_pred HHHHHcCCcEEEEcCCCCHHH----HHHHHHhCCCCEEEE
Confidence 32 2478999999974 344 444455556886543
No 129
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=75.93 E-value=46 Score=30.21 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=84.9
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 68 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGES-P-----TLTFEEHEKVIEFAVKRA------------------------AG 68 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5677888888889999995543 332211 1 134455556666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 69 rvpviaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (294)
T 2ehh_A 69 RIKVIAGT-GG------------------NATHEAVH----LTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV 125 (294)
T ss_dssp SSEEEEEC-CC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEec-CC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 34467772 22 13455444 556677799999987542 47778777777766643
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++==.. .++--.-+.+...+.+++.+++.+|=--|.....+..+++.
T Consensus 126 -~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnivgiKds~gd~~~~~~~~~~ 176 (294)
T 2ehh_A 126 -DIPIIIYNIP---SRTCVEISVDTMFKLASECENIVASKESTPNMDRISEIVKR 176 (294)
T ss_dssp -CSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHH
T ss_pred -CCCEEEEeCC---cccCcCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHh
Confidence 6998853211 11111234454454442334544444444455555555543
No 130
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=75.85 E-value=49 Score=30.39 Aligned_cols=100 Identities=15% Similarity=0.112 Sum_probs=64.3
Q ss_pred HHHHHHhCCCCEEEEccCC----------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 173 RVLILANSGADLIAFETIP----------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~----------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
-++.|.++|++.+-+|-.. ...|...-++++++.....+++|.-..+.. + -+..+.++++.
T Consensus 99 ~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~--~-a~~g~~~ai~R 175 (295)
T 1s2w_A 99 LVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAF--I-AGWGLDEALKR 175 (295)
T ss_dssp HHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTT--T-TTCCHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHH--h-ccccHHHHHHH
Confidence 3666778999999999753 334666666666665434556665544322 1 23447888776
Q ss_pred hhc--CCCceEEEECC-CC-hhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 237 ADS--CEQVVAVGINC-TS-PRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 237 ~~~--~~~~~avGvNC-~~-p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
+.. ..|+++|-+-| .. ++.+..+.+.+. ...|+++-|..
T Consensus 176 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~~P~i~~~~~ 218 (295)
T 1s2w_A 176 AEAYRNAGADAILMHSKKADPSDIEAFMKAWN--NQGPVVIVPTK 218 (295)
T ss_dssp HHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT--TCSCEEECCST
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC--CCCCEEEeCCC
Confidence 532 25899999998 44 677767666653 23798877653
No 131
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=75.73 E-value=8.6 Score=35.09 Aligned_cols=97 Identities=10% Similarity=0.051 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEE-cc-----CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAF-ET-----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~-ET-----~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
++.+.+++ +++.+.++ ||.|++ -| .-+.+|=+.+++.+.+ ..||++.. .+.+..+++
T Consensus 16 iD~~~l~~----lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---rvpviaGv---------g~~~t~~ai 78 (283)
T 2pcq_A 16 LDEEAFRE----LAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP---RKPFLVGL---------MEETLPQAE 78 (283)
T ss_dssp BCHHHHHH----HHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC---SSCCEEEE---------CCSSHHHHH
T ss_pred cCHHHHHH----HHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh---CCcEEEeC---------CCCCHHHHH
Confidence 67655544 67777778 988764 22 1266787888887776 59999887 345667777
Q ss_pred HHhhc--CCCceEEEECCC---Ch---hhHHHHHHHHhhhcCCcEEEeeC
Q 019107 235 SIADS--CEQVVAVGINCT---SP---RFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~---~p---~~~~~~l~~l~~~~~~pl~vypN 276 (346)
+..+. ..+++++.+-.- .| +.+....+.+.+ +.|+++|-+
T Consensus 79 ~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~--~lPiilYn~ 126 (283)
T 2pcq_A 79 GALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE--KMPLFLYHV 126 (283)
T ss_dssp HHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH--HSCEEEEEC
T ss_pred HHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc--CCCEEEEeC
Confidence 65532 247899888763 23 445555666665 789999976
No 132
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=75.37 E-value=49 Score=30.16 Aligned_cols=151 Identities=15% Similarity=0.069 Sum_probs=84.4
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 75 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGES-AT-----LSVEEHTAVIEAVVKHV------------------------AK 75 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc-cc-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999995543 333211 12 34455556666555443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+ -++.+++..-.+.+.+..
T Consensus 76 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 76 RVPVIAG-TGA------------------NNTVEAIA----LSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3346777 222 13455544 56667779999998764 246777777777766654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
++|+++==.. .++--.-+.+...+ +.+.+++.+|=--|.....+..+++
T Consensus 133 -~lPiilYn~P---~~tg~~l~~~~~~~-La~~pnivgiKdssgd~~~~~~~~~ 181 (297)
T 3flu_A 133 -SIPMIIYNVP---GRTVVSMTNDTILR-LAEIPNIVGVKEASGNIGSNIELIN 181 (297)
T ss_dssp -CSCEEEEECH---HHHSSCCCHHHHHH-HTTSTTEEEEEECSCCHHHHHHHHH
T ss_pred -CCCEEEEECC---chhccCCCHHHHHH-HHcCCCEEEEEeCCCCHHHHHHHHH
Confidence 6999854211 11112234444444 4344444444444445555555544
No 133
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=75.20 E-value=49 Score=30.15 Aligned_cols=149 Identities=15% Similarity=0.080 Sum_probs=81.9
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 68 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGES-P-----TLTEEEHKRVVALVAEQA------------------------QG 68 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999996553 332211 1 134455556666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 69 rvpviaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 125 (297)
T 2rfg_A 69 RVPVIAGA-GS------------------NNPVEAVR----YAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI 125 (297)
T ss_dssp SSCBEEEC-CC------------------SSHHHHHH----HHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEcc-CC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 33466772 22 13445444 455667789999987542 46777777777766654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGL 259 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~ 259 (346)
++|+++==.. +++--.-+.+...+.+ +.+++.+|=--|.....+..+
T Consensus 126 -~lPiilYn~P---~~tg~~l~~~~~~~La-~~pnIvgiKds~gd~~~~~~~ 172 (297)
T 2rfg_A 126 -DIPIIVYNIP---PRAVVDIKPETMARLA-ALPRIVGVKDATTDLARISRE 172 (297)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHH-TSTTEEEEEECSCCTTHHHHH
T ss_pred -CCCEEEEeCc---cccCCCCCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHH
Confidence 6998853211 1111123444444444 334444444334444444444
No 134
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=74.89 E-value=49 Score=30.00 Aligned_cols=153 Identities=10% Similarity=-0.009 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 69 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEA-T-----TMTETERKETIKFVIDKV------------------------NK 69 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 567788888888999999554 3333211 1 134455556666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 70 r~pvi~G-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (291)
T 3a5f_A 70 RIPVIAG-TGSN------------------NTAASIA----MSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV 126 (291)
T ss_dssp SSCEEEE-CCCS------------------SHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC
T ss_pred CCcEEEe-CCcc------------------cHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346777 2221 3445443 566677799999987542 46667666665555543
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l 263 (346)
++|+++==. ..++--.-+.+...+.+ +.+++.+|=--|.....+..+++..
T Consensus 127 -~lPiilYn~---P~~tg~~l~~~~~~~La-~~pnivgiK~s~gd~~~~~~~~~~~ 177 (291)
T 3a5f_A 127 -STPIIIYNV---PGRTGLNITPGTLKELC-EDKNIVAVXEASGNISQIAQIKALC 177 (291)
T ss_dssp -CSCEEEEEC---HHHHSCCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHHH
T ss_pred -CCCEEEEeC---ccccCCCCCHHHHHHHH-cCCCEEEEeCCCCCHHHHHHHHHhc
Confidence 599885321 11111223444444444 3344444444444555665555443
No 135
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=74.78 E-value=6.7 Score=36.71 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCc-EEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIP-AWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~p-v~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+++.+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++.-...+ +.++|.+.++. |..++.++..++
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~----GlA~AN~laA~~ 221 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDL----GLATANSLAALQ 221 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCC----CHHHHHHHHHHH
Confidence 355556777888899998765 33 477899999998887421211 77888887764 445555555554
No 136
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=74.77 E-value=65 Score=32.24 Aligned_cols=65 Identities=14% Similarity=0.047 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-c--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh
Q 019107 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~ 237 (346)
+++.+.++.+.+.|+|.|.+= | +..+.++..+++++++.-. ..+.+++.+.++. |..++.++..+
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p-~~i~I~~H~Hnd~----GlAvAN~laAv 242 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYG-QKTQINLHCHSTT----GVTEVSLMKAI 242 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHC-TTCCEEEEEBCTT----SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcC-CCceEEEEeCCCC----ChHHHHHHHHH
Confidence 466677888888999999664 3 3468899999998887321 1356788887654 44444444444
No 137
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=74.58 E-value=23 Score=32.98 Aligned_cols=91 Identities=18% Similarity=0.086 Sum_probs=56.0
Q ss_pred hCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC----Ch
Q 019107 179 NSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT----SP 253 (346)
Q Consensus 179 ~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~----~p 253 (346)
++|+|.+.+-+ ..+++++..+++.+++.+ ..|..++.+- .+....-.-+. .+..++ .+++.|.+-=+ .|
T Consensus 98 ~~Gvd~~ri~~~~~nle~~~~~v~~ak~~G--~~v~~~~~~~-~~~~~~~~~l~-~~~~~~--~G~~~i~l~Dt~G~~~P 171 (320)
T 3dxi_A 98 IGLVDMIRIAIDPQNIDRAIVLAKAIKTMG--FEVGFNVMYM-SKWAEMNGFLS-KLKAID--KIADLFCMVDSFGGITP 171 (320)
T ss_dssp TTTCSEEEEEECGGGHHHHHHHHHHHHTTT--CEEEEEECCT-TTGGGSTTSGG-GGGGGT--TTCSEEEEECTTSCCCH
T ss_pred hcCCCEEEEEecHHHHHHHHHHHHHHHHCC--CEEEEEEEeC-CCCCCHHHHHH-HHHHhh--CCCCEEEECcccCCCCH
Confidence 48999986544 445778888888888877 5554444321 11111111122 222232 36777776654 48
Q ss_pred hhHHHHHHHHhhhcCCcEEEee
Q 019107 254 RFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 254 ~~~~~~l~~l~~~~~~pl~vyp 275 (346)
..+..+++.+++..+.|+.+..
T Consensus 172 ~~~~~lv~~l~~~~~~~i~~H~ 193 (320)
T 3dxi_A 172 KEVKNLLKEVRKYTHVPVGFHG 193 (320)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEC
T ss_pred HHHHHHHHHHHHhCCCeEEEEe
Confidence 9999999999988788887764
No 138
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.51 E-value=9.7 Score=33.48 Aligned_cols=96 Identities=18% Similarity=0.202 Sum_probs=54.8
Q ss_pred HHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEc--CC---Cccc-----CCCCHHHHHHHhhcC
Q 019107 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSK--DG---INVV-----SGDSILECASIADSC 240 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~--~~---~~l~-----~G~~~~~av~~~~~~ 240 (346)
+++.+.+.|+|.+++-+ +.++.. +.++.+..+ ...+.+++.+. ++ -.+. ++.+..+.+..+..
T Consensus 88 ~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 162 (253)
T 1thf_D 88 TASELILRGADKVSINTAAVENPSL---ITQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK- 162 (253)
T ss_dssp HHHHHHHTTCSEEEESHHHHHCTHH---HHHHHHHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEChHHHhChHH---HHHHHHHcC-CCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH-
Confidence 45556678999998765 334333 334444444 22455666654 11 1111 12356666666655
Q ss_pred CCceEEEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 241 EQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 241 ~~~~avGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
.++..|.++...++. -..+++++++..+.|+++
T Consensus 163 ~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia 200 (253)
T 1thf_D 163 RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 200 (253)
T ss_dssp TTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEE
T ss_pred CCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEE
Confidence 477888887654322 256777877777788765
No 139
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=74.47 E-value=61 Score=30.91 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=33.2
Q ss_pred HHHHHHHhCCCCEEEEccCC-----------CHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 172 RRVLILANSGADLIAFETIP-----------NKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~-----------~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
+.++.+.++|+|++.+-++- ..+..+.+.++.++.| +|++.++
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~ 213 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEI 213 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 46777888999999888742 3567777777778877 9999776
No 140
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=74.19 E-value=51 Score=29.89 Aligned_cols=140 Identities=12% Similarity=0.093 Sum_probs=78.9
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 69 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGES-A-----TLNHDEHADVVMMTLDLA------------------------DG 69 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999996553 332211 1 134455556666655443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 70 r~pviaGv-g~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 70 RIPVIAGT-GA------------------NATAEAIS----LTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp SSCEEEEC-CC------------------SSHHHHHH----HHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCcEEEec-CC------------------ccHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 33467773 22 13344443 566677899999987542 46778777777766643
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
++|+++== -..++--.-+.+...+.+ +. +-.+|+--++
T Consensus 127 -~lPiilYn---~P~~tg~~l~~~~~~~La-~~--pnivgiK~s~ 164 (292)
T 2ojp_A 127 -DLPQILYN---VPSRTGCDLLPETVGRLA-KV--KNIIGIXEAT 164 (292)
T ss_dssp -SSCEEEEC---CHHHHSCCCCHHHHHHHH-TS--TTEEEC-CCS
T ss_pred -CCCEEEEe---CcchhccCCCHHHHHHHH-cC--CCEEEEeCCC
Confidence 69988421 111211223444444444 33 3466665543
No 141
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=74.05 E-value=50 Score=30.31 Aligned_cols=104 Identities=10% Similarity=-0.012 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCC--------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCC
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG 227 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G 227 (346)
+.+++.+ -++.+.++|++.+-+|-.. ...|...-++++++.....++.|.-..+. ...
T Consensus 92 ~~~~~~~----~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda--~~~-- 163 (295)
T 1xg4_A 92 SAFNVAR----TVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDA--LAV-- 163 (295)
T ss_dssp SHHHHHH----HHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECC--HHH--
T ss_pred CHHHHHH----HHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHH--hhh--
Confidence 4455544 3555667899999999653 34466556666666543466776654432 221
Q ss_pred CCHHHHHHHhhc--CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 228 DSILECASIADS--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 228 ~~~~~av~~~~~--~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
..+.++++.+.. ..|+++|-+-|.. ++.+..+.+. .+.|+++-+..
T Consensus 164 ~gl~~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~----~~iP~~~N~~~ 212 (295)
T 1xg4_A 164 EGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADA----VQVPILANITE 212 (295)
T ss_dssp HCHHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHH----HCSCBEEECCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH----cCCCEEEEecc
Confidence 235677665432 2589999999974 4555555444 46898775543
No 142
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=73.92 E-value=20 Score=37.05 Aligned_cols=106 Identities=12% Similarity=0.051 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEccCCC----------------H---HHHHHHHHHHHHhCCCCcEEEEEEEcCCCc-
Q 019107 164 ETLKEFHRRRVLILANSGADLIAFETIPN----------------K---LEAKAYAELLEEEGITIPAWFSFNSKDGIN- 223 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD~i~~ET~~~----------------~---~E~~a~~~a~~~~~~~~pv~is~~~~~~~~- 223 (346)
.++.+||++++ +.|+.+|+.|.+.- - ...+.+.+++++.+ .++++++.= ....
T Consensus 39 ~~~~~~y~~ra----~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g--~~i~~Ql~h-~Gr~~ 111 (729)
T 1o94_A 39 GFQSAHRSVKA----EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYG--ALAGVELWY-GGAHA 111 (729)
T ss_dssp HHHHHHHHHHH----HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTT--CEEEEEEEC-CGGGS
T ss_pred HHHHHHHHHHh----cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCC--CeEEEEecC-CCccc
Confidence 47888888776 37899998885421 1 13444555666655 888888853 1000
Q ss_pred --------------cc-CC------------------CCHHHHHHHhhcCCCceEEEECCCC---------h--------
Q 019107 224 --------------VV-SG------------------DSILECASIADSCEQVVAVGINCTS---------P-------- 253 (346)
Q Consensus 224 --------------l~-~G------------------~~~~~av~~~~~~~~~~avGvNC~~---------p-------- 253 (346)
+. .+ +.+.+++..+.. .+.++|=|||.+ |
T Consensus 112 ~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~-aGfDgVEih~a~gyLl~qFlsp~~N~R~D~ 190 (729)
T 1o94_A 112 PNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRD-AGFDIVYVYGAHSYLPLQFLNPYYNKRTDK 190 (729)
T ss_dssp CCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEECTTCHHHHHHCTTTCCCCST
T ss_pred cccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccccchHHHHhcCCccCCCcCc
Confidence 00 00 134455555544 589999999977 3
Q ss_pred ---------hhHHHHHHHHhhhc--CCcEEEeeCC
Q 019107 254 ---------RFIHGLILSVRKVT--SKPVIIYPNS 277 (346)
Q Consensus 254 ---------~~~~~~l~~l~~~~--~~pl~vypN~ 277 (346)
..+..+++.+++.. +.|+++.-+.
T Consensus 191 yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~ 225 (729)
T 1o94_A 191 YGGSLENRARFWLETLEKVKHAVGSDCAIATRFGV 225 (729)
T ss_dssp TSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred CCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcc
Confidence 13556667777765 6788887654
No 143
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=73.49 E-value=39 Score=33.27 Aligned_cols=64 Identities=19% Similarity=0.131 Sum_probs=39.4
Q ss_pred HHHHHhCCCCEEEEc----c-----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 174 VLILANSGADLIAFE----T-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 174 i~~l~~~gvD~i~~E----T-----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
++.+.++|+|+|.+- + .|.+.-+..+.+++++. ++|++.+--+ .+..++++.+.
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~--~iPVIa~GGI---------~~~~di~kal~ 352 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGT--GVPLIADGGI---------RFSGDLAKAMV 352 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTT--TCCEEEESCC---------CSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccC--CCcEEEeCCC---------CCHHHHHHHHH
Confidence 456788999999872 1 34554455555555554 4999965311 24567777664
Q ss_pred cCCCceEEEECC
Q 019107 239 SCEQVVAVGINC 250 (346)
Q Consensus 239 ~~~~~~avGvNC 250 (346)
. +++++++--
T Consensus 353 ~--GAd~V~vGs 362 (490)
T 4avf_A 353 A--GAYCVMMGS 362 (490)
T ss_dssp H--TCSEEEECT
T ss_pred c--CCCeeeecH
Confidence 3 567777653
No 144
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=73.41 E-value=15 Score=32.98 Aligned_cols=119 Identities=12% Similarity=0.110 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHH----HH-HHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKL----EA-KAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~----E~-~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~ 235 (346)
++.+++.+.|++ + ..+.|++++|+...+. +- ....+.++..+ .||++-..... | ++.+++.
T Consensus 111 ~~~~~i~~~~~~----l-~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~--~pVILV~~~~~------g-~i~~~~l 176 (251)
T 3fgn_A 111 PARDQIVRLIAD----L-DRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVA--AAALVVVTADL------G-TLNHTKL 176 (251)
T ss_dssp CCHHHHHHHHHT----T-CCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTT--CEEEEEECSST------T-HHHHHHH
T ss_pred CCHHHHHHHHHH----H-HhcCCEEEEECCCCCcCCcCcccchHHHHHHHcC--CCEEEEEcCCC------c-cHHHHHH
Confidence 466677665543 2 3578999999975542 21 24456677755 89986654321 1 2333333
Q ss_pred H---hhc-CCCceEEEECCCC--hhh-HHHHHHHHhhhcCCcE-EEeeCCCCccccccccccccCCCChHHHHHHHHHHH
Q 019107 236 I---ADS-CEQVVAVGINCTS--PRF-IHGLILSVRKVTSKPV-IIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWR 307 (346)
Q Consensus 236 ~---~~~-~~~~~avGvNC~~--p~~-~~~~l~~l~~~~~~pl-~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (346)
. +.. ...+.++-+|.+. |+. ....++.+.+. .|+ ++-|.... .+++++|.+.+..|.
T Consensus 177 t~~~l~~~g~~i~GvIlN~v~~~~~~~~~~~~~~le~~--vpvLG~iP~~~~-------------~l~~~~~~~~~~~~~ 241 (251)
T 3fgn_A 177 TLEALAAQQVSCAGLVIGSWPDPPGLVAASNRSALARI--AMVRAALPAGAA-------------SLDAGDFAAMSAAAF 241 (251)
T ss_dssp HHHHHHHTTCCEEEEEEEEECSSCCHHHHHHHHHHHHH--SCEEEEEETTGG-------------GCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCEEEEEEECCCCchhhhhhhHHHHHHHh--CCEEEEeeCCCC-------------cCCHHHHHHHHhccc
Confidence 2 222 2357788899973 322 23345556555 774 55564311 145788999998886
Q ss_pred H
Q 019107 308 D 308 (346)
Q Consensus 308 ~ 308 (346)
.
T Consensus 242 ~ 242 (251)
T 3fgn_A 242 D 242 (251)
T ss_dssp C
T ss_pred c
Confidence 3
No 145
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=72.96 E-value=62 Score=30.26 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=66.9
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEcc--------C--C-----------CH-HHH---HHHHHHHHHh-CCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFET--------I--P-----------NK-LEA---KAYAELLEEE-GITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET--------~--~-----------~~-~E~---~a~~~a~~~~-~~~~ 210 (346)
.++.+|+ .+.|.+.++.+.++|.|.|=+-- | | ++ ..+ ..+++++++. +.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 4666654 55677778888889999885431 0 1 12 122 4455666663 4467
Q ss_pred cEEEEEEEcCCCcccCCCCHHHHHHHhhc--CCCceEEEECCC---------ChhhHHHHHHHHhhhcCCcEEE
Q 019107 211 PAWFSFNSKDGINVVSGDSILECASIADS--CEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 211 pv~is~~~~~~~~l~~G~~~~~av~~~~~--~~~~~avGvNC~---------~p~~~~~~l~~l~~~~~~pl~v 273 (346)
||.+-++..+ ...+|.++.+++..++. .. ++.|=+... .|..-..+++.+++..+.|+++
T Consensus 212 pv~vRls~~~--~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~ 282 (343)
T 3kru_A 212 PIFVRVSADD--YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA 282 (343)
T ss_dssp CEEEEEECCC--SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred CeEEEeechh--hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccce
Confidence 9999887643 22357777776665432 23 777766321 1233456677777777888765
No 146
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=72.43 E-value=56 Score=29.59 Aligned_cols=151 Identities=13% Similarity=0.133 Sum_probs=81.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-CcccCCC--CHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSGD--SILEC 233 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-~~l~~G~--~~~~a 233 (346)
+.+++.+ +++.+...|+|++ +++.....+++...+..+++.-.++|+++++....+ |... +. .-.+.
T Consensus 50 ~~~e~~~----~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~-~~~~~~~~l 124 (276)
T 3o1n_A 50 TITDVKS----EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQA-LTTGQYIDL 124 (276)
T ss_dssp SHHHHHH----HHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBC-CCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCC-CCHHHHHHH
Confidence 5666654 4555666899988 456666667777778878875336999999976443 4432 22 12223
Q ss_pred HHHhhcCCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEE-eeCCCCccccccccccccCCCChHHHHHHHHHHHHcCC
Q 019107 234 ASIADSCEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVII-YPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGA 311 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~v-ypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 311 (346)
.+.+.....++.|=|-=.. .+.+..+++..++. ...+++ |-|-.. ..+.++|.+...+..+.|+
T Consensus 125 l~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~-~~kvI~S~Hdf~~-------------tP~~~el~~~~~~~~~~Ga 190 (276)
T 3o1n_A 125 NRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH-NVAVIMSNHDFHK-------------TPAAEEIVQRLRKMQELGA 190 (276)
T ss_dssp HHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT-TCEEEEEEEESSC-------------CCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC-CCEEEEEeecCCC-------------CcCHHHHHHHHHHHHHcCC
Confidence 3332222227777776653 34555555544332 344444 332210 0124567777777777774
Q ss_pred eEEee-cCCCchHHHHHHHHH
Q 019107 312 SLFGG-CCRTTPNTIKAISRV 331 (346)
Q Consensus 312 ~ivGG-CCGt~P~hI~al~~~ 331 (346)
.|+== +--.++++.-.|-+.
T Consensus 191 DIvKia~~a~s~~Dvl~Ll~~ 211 (276)
T 3o1n_A 191 DIPKIAVMPQTKADVLTLLTA 211 (276)
T ss_dssp SEEEEEECCSSHHHHHHHHHH
T ss_pred CEEEEEecCCChHHHHHHHHH
Confidence 33211 123445555444443
No 147
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=72.41 E-value=58 Score=29.82 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=60.7
Q ss_pred HHHHHHhCCCCEEEEccCC----------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 173 RVLILANSGADLIAFETIP----------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~----------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
-++.|.++|++.+-+|-.. ...|...-++++++.....+++|.-..+. .+ -+..++++++.
T Consensus 95 ~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda--~~-a~~g~~~ai~R 171 (290)
T 2hjp_A 95 VVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEA--LI-AGLGQQEAVRR 171 (290)
T ss_dssp HHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT--TT-TTCCHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH--hh-ccccHHHHHHH
Confidence 3555667999999999653 23366656666666543345665554432 21 23457888776
Q ss_pred hhc--CCCceEEEECC-CC-hhhHHHHHHHHhhhcCCcEEEee
Q 019107 237 ADS--CEQVVAVGINC-TS-PRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 237 ~~~--~~~~~avGvNC-~~-p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+.. ..|+++|-+-| .. ++.+..+.+.+. .+.|+++-|
T Consensus 172 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~--~~vP~i~n~ 212 (290)
T 2hjp_A 172 GQAYEEAGADAILIHSRQKTPDEILAFVKSWP--GKVPLVLVP 212 (290)
T ss_dssp HHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC--CSSCEEECG
T ss_pred HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC--CCCCEEEec
Confidence 532 25899999999 63 566655555542 138988744
No 148
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.33 E-value=33 Score=32.05 Aligned_cols=93 Identities=13% Similarity=-0.011 Sum_probs=61.0
Q ss_pred HHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH---hhcCCCceEEEEC
Q 019107 174 VLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI---ADSCEQVVAVGIN 249 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~---~~~~~~~~avGvN 249 (346)
++...++|+|.+.+=+ .+..++++.+++++++.+ +.+..++. +. ...+++.+++. +.. .++..|.+.
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G--~~v~~~~~--~a----~~~~~e~~~~ia~~~~~-~Ga~~i~l~ 169 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLG--MDTVGFLM--MS----HMIPAEKLAEQGKLMES-YGATCIYMA 169 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHT--CEEEEEEE--ST----TSSCHHHHHHHHHHHHH-HTCSEEEEE
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCC--CEEEEEEE--eC----CCCCHHHHHHHHHHHHH-CCCCEEEEC
Confidence 4445567999886543 234467888889899887 66665553 21 23344444443 333 356666665
Q ss_pred CC----ChhhHHHHHHHHhhhc--CCcEEEee
Q 019107 250 CT----SPRFIHGLILSVRKVT--SKPVIIYP 275 (346)
Q Consensus 250 C~----~p~~~~~~l~~l~~~~--~~pl~vyp 275 (346)
=+ .|..+..+++.+++.. +.|+.+..
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 33 4999999999999887 78888865
No 149
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=72.29 E-value=44 Score=28.32 Aligned_cols=79 Identities=20% Similarity=0.160 Sum_probs=47.6
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
+++.+.+.|+|++.+... + ..+++..++.+ .++++. + .++.++..... .+++.|+++-+.
T Consensus 72 ~i~~a~~~Gad~V~~~~~-~----~~~~~~~~~~g--~~~~~g--~---------~t~~e~~~a~~--~G~d~v~v~~t~ 131 (212)
T 2v82_A 72 QVDALARMGCQLIVTPNI-H----SEVIRRAVGYG--MTVCPG--C---------ATATEAFTALE--AGAQALKIFPSS 131 (212)
T ss_dssp HHHHHHHTTCCEEECSSC-C----HHHHHHHHHTT--CEEECE--E---------CSHHHHHHHHH--TTCSEEEETTHH
T ss_pred HHHHHHHcCCCEEEeCCC-C----HHHHHHHHHcC--CCEEee--c---------CCHHHHHHHHH--CCCCEEEEecCC
Confidence 577788899999986653 2 22346666665 677765 2 24566655443 478999985433
Q ss_pred hhhHHHHHHHHhhhcC--CcEE
Q 019107 253 PRFIHGLILSVRKVTS--KPVI 272 (346)
Q Consensus 253 p~~~~~~l~~l~~~~~--~pl~ 272 (346)
+ .-...++++.+..+ .|++
T Consensus 132 ~-~g~~~~~~l~~~~~~~ipvi 152 (212)
T 2v82_A 132 A-FGPQYIKALKAVLPSDIAVF 152 (212)
T ss_dssp H-HCHHHHHHHHTTSCTTCEEE
T ss_pred C-CCHHHHHHHHHhccCCCeEE
Confidence 2 22355566655443 4543
No 150
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=72.23 E-value=64 Score=30.13 Aligned_cols=227 Identities=16% Similarity=0.141 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCHHhHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAK-GFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSR 132 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~-g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~ 132 (346)
.+.+.+.-++-++.|-.-|.. |..-+..+++. |-+...-.-++.+|++..|++. .
T Consensus 65 id~l~~~~~~~~~lGi~~v~L--Fgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~--------------------p-- 120 (337)
T 1w5q_A 65 IDQLLIEAEEWVALGIPALAL--FPVTPVEKKSLDAAEAYNPEGIAQRATRALRERF--------------------P-- 120 (337)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE--EECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHC--------------------T--
T ss_pred HHHHHHHHHHHHHCCCCEEEE--ecCCCcccCCcccCccCCCCChHHHHHHHHHHHC--------------------C--
Confidence 366777778888999885554 44423332222 2111111247778887776553 1
Q ss_pred CcEEEE--ecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCC
Q 019107 133 PVLVAA--SVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI 210 (346)
Q Consensus 133 ~~~VaG--siGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~ 210 (346)
..+|.. |+-||-+.=++|---. ...++-++-.+...+|+-...++|+|++.==.|.+- .+.+|.+++.+.|..-
T Consensus 121 dl~vitDvcLc~YT~HGHcGil~~---~g~V~ND~Tl~~L~k~Als~A~AGADiVAPSdMMDG-rV~aIR~aLd~~G~~~ 196 (337)
T 1w5q_A 121 ELGIITDVCLCEFTTHGQCGILDD---DGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDG-RIGAIREALESAGHTN 196 (337)
T ss_dssp TSEEEEEECSTTTBTTCCSSCBCT---TSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-HHHHHHHHHHHTTCTT
T ss_pred CeEEEEeeecccCCCCCcceeeCC---CCcCccHHHHHHHHHHHHHHHHcCCCeEeccccccc-HHHHHHHHHHHCCCCC
Confidence 244444 4566655444432210 012677888888888988899999999997777665 4678888888877543
Q ss_pred cEEEEEEEcC---------------------CCc--ccCCCCHHHHHHHh--hcCCCceEEEECCCChhhHHHHHHHHhh
Q 019107 211 PAWFSFNSKD---------------------GIN--VVSGDSILECASIA--DSCEQVVAVGINCTSPRFIHGLILSVRK 265 (346)
Q Consensus 211 pv~is~~~~~---------------------~~~--l~~G~~~~~av~~~--~~~~~~~avGvNC~~p~~~~~~l~~l~~ 265 (346)
--++|-+.+= +.+ ..|--.-.+|++.+ +-..|++.|.|-=.-|. +.+++.+++
T Consensus 197 v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmdpaN~~EAlrE~~~Di~EGAD~vMVKPal~Y--LDIir~vk~ 274 (337)
T 1w5q_A 197 VRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPY--LDIVRRVKD 274 (337)
T ss_dssp CEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGGG--HHHHHHHHH
T ss_pred ceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCCCCChHHHHHHHHhhHHhCCCEEEEcCCCch--HHHHHHHHH
Confidence 3344654321 111 11212223455543 22257899998766442 567777777
Q ss_pred hcCCcEEEeeCCCCc---cccccccccccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 266 VTSKPVIIYPNSGET---YNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 266 ~~~~pl~vypN~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
.++.|+.+|--+|+. .-...+.|.+ ...+.|....++.+|+.+|=
T Consensus 275 ~~~~PvaaYqVSGEYAMikaAa~~GwiD-----~~~v~Esl~~~kRAGAd~Ii 322 (337)
T 1w5q_A 275 EFRAPTFVYQVSGEYAMHMGAIQNGWLA-----ESVILESLTAFKRAGADGIL 322 (337)
T ss_dssp HHCSCEEEEECHHHHHHHHHHHHTTSSC-----TTHHHHHHHHHHHHTCSEEE
T ss_pred hcCCCEEEEEcCcHHHHHHHHHHcCCcc-----HHHHHHHHHHHHhcCCCEEe
Confidence 789999999998862 1112235643 23467777778888888764
No 151
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=72.19 E-value=65 Score=35.29 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=64.3
Q ss_pred HHHHHhCCCCEE-EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCccc----CCCCHH---HHHHHhhcCCCceE
Q 019107 174 VLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVV----SGDSIL---ECASIADSCEQVVA 245 (346)
Q Consensus 174 i~~l~~~gvD~i-~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~----~G~~~~---~av~~~~~~~~~~a 245 (346)
++...++|+|.| +|-..+++...+-+.+.+++.+ .-+...+ |.....+. +-.++. +.++.+.+ .+++.
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g--~~~~~~i-~~~~~~~~pe~~~~~~~~~~~~~a~~~~~-~Ga~~ 708 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAG--KISEGTI-CYTGDILNPERSNIYTLEYYVKLAKELER-EGFHI 708 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTT--CEEEEEE-ECCSCTTCTTTCSSSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHh--hheeEEE-eecccccChhhcCCCCHHHHHHHHHHHHH-cCCCe
Confidence 555667899999 6777788888888888888876 3333333 32221111 123444 44444444 47777
Q ss_pred EEECCC----ChhhHHHHHHHHhhhcCCcEEEee
Q 019107 246 VGINCT----SPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 246 vGvNC~----~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
|.+-=+ .|..+..+++.+++..+.|+.+..
T Consensus 709 i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~ 742 (1150)
T 3hbl_A 709 LAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHT 742 (1150)
T ss_dssp EEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred eeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 777543 499999999999988888887765
No 152
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=72.12 E-value=34 Score=31.47 Aligned_cols=111 Identities=13% Similarity=0.096 Sum_probs=63.4
Q ss_pred HHhCCCCEEEEccC-C------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCccc-CCCCHHHHHHHhhcCCCceEEEE
Q 019107 177 LANSGADLIAFETI-P------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVV-SGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 177 l~~~gvD~i~~ET~-~------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~-~G~~~~~av~~~~~~~~~~avGv 248 (346)
..+.|+|.+.+=-. . .++|+..+++.+++.+ +|+++- +.. +.++. +.+.+..+++.... .+++.|.+
T Consensus 134 Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~G--lpvIie-~~~-G~~~~~d~e~i~~aariA~e-lGAD~VKt 208 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVG--MPTMAV-TGV-GKDMVRDQRYFSLATRIAAE-MGAQIIKT 208 (295)
T ss_dssp HHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTT--CCEEEE-ECC-----CCSHHHHHHHHHHHHH-TTCSEEEE
T ss_pred HHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcC--CEEEEE-CCC-CCccCCCHHHHHHHHHHHHH-hCCCEEEe
Confidence 44578888764221 1 3446667777777765 898874 322 22221 21123335554444 58899999
Q ss_pred CCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 249 NCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 249 NC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
+-+ ++. ++++.+..+.|+++ +|.. ..+++++.+.+++.++.|+.
T Consensus 209 ~~t-~e~----~~~vv~~~~vPVv~---~GG~------------~~~~~~~l~~v~~ai~aGA~ 252 (295)
T 3glc_A 209 YYV-EKG----FERIVAGCPVPIVI---AGGK------------KLPEREALEMCWQAIDQGAS 252 (295)
T ss_dssp ECC-TTT----HHHHHHTCSSCEEE---ECCS------------CCCHHHHHHHHHHHHHTTCS
T ss_pred CCC-HHH----HHHHHHhCCCcEEE---EECC------------CCCHHHHHHHHHHHHHhCCe
Confidence 865 333 34444445678765 2311 02357888888888888886
No 153
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=71.94 E-value=25 Score=33.08 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhCC--CCEEEEcc-----CCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
+.+.+.++.|.+.| +|.|=+.. .|++.+++.+++.+.+.| +||||| +.+.
T Consensus 202 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--l~i~iTElDi~ 259 (356)
T 2uwf_A 202 DDLYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEKFTSLG--LDNQVTELDMS 259 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHHHHhcC--CcEEEEecccc
Confidence 44556788888777 59986643 378999999999988876 999999 4443
No 154
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=71.68 E-value=62 Score=29.76 Aligned_cols=152 Identities=15% Similarity=0.103 Sum_probs=86.0
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~~Er~~v~~~~v~~~------------------------~g 91 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGES-A-----TLDVEEHIQVIRRVVDQV------------------------KG 91 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTG-G-----GCCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 4678888888889999995543 343321 1 234455666666665543 13
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 92 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 92 RIPVIAG-TGA------------------NSTREAVA----LTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV 148 (314)
T ss_dssp SSCEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCC------------------cCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346676 222 13455544 56667779999998765 246777777777766653
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++==.. .++-..-+++...+.+ +.+++.+|=--|.....+..+++.
T Consensus 149 -~lPiilYn~P---~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~~ 198 (314)
T 3qze_A 149 -AIPQILYNVP---GRTSCDMLPETVERLS-KVPNIIGIKEATGDLQRAKEVIER 198 (314)
T ss_dssp -CSCEEEEECH---HHHSCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHHH
T ss_pred -CCCEEEEeCc---cccCCCCCHHHHHHHh-cCCCEEEEEcCCCCHHHHHHHHHH
Confidence 6999854311 1221233445455444 444444444334445555555443
No 155
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=71.36 E-value=47 Score=32.34 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=55.9
Q ss_pred CCc-EEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC-C--h------------------hhHHHHHHHHhhh
Q 019107 209 TIP-AWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-S--P------------------RFIHGLILSVRKV 266 (346)
Q Consensus 209 ~~p-v~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~-~--p------------------~~~~~~l~~l~~~ 266 (346)
++| +++-++.. . +-+.+.+.++.+.+ .++++|-+-.+ . + .....++.++++.
T Consensus 296 ~~P~V~vKispd--~---~~ed~~~iA~~~~~-aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~ 369 (443)
T 1tv5_A 296 KKPLVFVKLAPD--L---NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNY 369 (443)
T ss_dssp SCCEEEEEECSC--C---CHHHHHHHHHHHHH-TTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCC--C---CHHHHHHHHHHHHH-cCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHH
Confidence 478 78776532 1 11234556666655 47887755443 1 0 0124567777777
Q ss_pred c--CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCC---CchHHHHHHHHHHc
Q 019107 267 T--SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCR---TTPNTIKAISRVLS 333 (346)
Q Consensus 267 ~--~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCG---t~P~hI~al~~~~~ 333 (346)
. +.|++.- .| + .++++..+ .+..||..|+-+-+ .+|.-++.|.+.+.
T Consensus 370 v~~~iPVIg~--GG-I-------------~s~~DA~e----~l~aGAd~Vqigrall~~gP~l~~~i~~~l~ 421 (443)
T 1tv5_A 370 TNKQIPIIAS--GG-I-------------FSGLDALE----KIEAGASVCQLYSCLVFNGMKSAVQIKRELN 421 (443)
T ss_dssp TTTCSCEEEE--SS-C-------------CSHHHHHH----HHHTTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred cCCCCcEEEE--CC-C-------------CCHHHHHH----HHHcCCCEEEEcHHHHhcChHHHHHHHHHHH
Confidence 6 6787652 22 1 23444433 44689999886655 37777777665543
No 156
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=71.34 E-value=64 Score=29.74 Aligned_cols=154 Identities=14% Similarity=0.079 Sum_probs=82.6
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 79 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGTNAEA-FL-----LTREERAQLIATARKAV------------------------GP 79 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSGGGTG-GG-----SCHHHHHHHHHHHHHHH------------------------CT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 457888888888999999544 3343321 11 34455556665555433 13
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC------CCHHHHHHHHHHHHH
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI------PNKLEAKAYAELLEE 205 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~------~~~~E~~a~~~a~~~ 205 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+
T Consensus 80 rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~ 136 (318)
T 3qfe_A 80 DFPIMAG-VGA------------------HSTRQVLE----HINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSC 136 (318)
T ss_dssp TSCEEEE-CCC------------------SSHHHHHH----HHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCC------------------CCHHHHHH----HHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHh
Confidence 3456777 222 14455544 455566689999988653 245666666666666
Q ss_pred hCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 206 EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 206 ~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
.. ++|+++==..... .--.-+.+...+..+..+++.+|=--|.....+..+++.
T Consensus 137 a~-~lPiilYn~P~~t--~g~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~ 190 (318)
T 3qfe_A 137 QS-PLPVVIYNFPGVC--NGIDLDSDMITTIARKNPNVVGVKLTCASVGKITRLAAT 190 (318)
T ss_dssp HC-SSCEEEEECCC------CCCCHHHHHHHHHHCTTEEEEEESSCCHHHHHHHHHH
T ss_pred hC-CCCEEEEeCCccc--CCCCCCHHHHHHHHhhCCCEEEEEeCCCCHHHHHHHHHh
Confidence 43 6999853321111 011234444444443244544444444455555555444
No 157
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=71.18 E-value=60 Score=30.07 Aligned_cols=95 Identities=14% Similarity=0.106 Sum_probs=55.5
Q ss_pred HHHHHHHHHhCCCCEEEEccCCC-HHH--HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE
Q 019107 170 HRRRVLILANSGADLIAFETIPN-KLE--AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~-~~E--~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av 246 (346)
-...+++..+.|+.+.+ -|+.. +++ .....+.+++...+.|+++++.. |.+.......++. .++++|
T Consensus 75 ~~~~a~aa~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~pv~~~i~~--------~~~~~~~~~~~~~-~gad~i 144 (349)
T 1p0k_A 75 NKSLARAASQAGIPLAV-GSQMSALKDPSERLSYEIVRKENPNGLIFANLGS--------EATAAQAKEAVEM-IGANAL 144 (349)
T ss_dssp HHHHHHHHHHHTCCEEC-CCCTTTTTCHHHHHHHHHHHHHCSSSCEEEEEET--------TCCHHHHHHHHHH-TTCSEE
T ss_pred HHHHHHHHHHcCCcEEe-ccchhcccCcccccceehhhhhCCCceeEEeecC--------CCCHHHHHHHHHh-cCCCeE
Confidence 34455566777887644 34432 222 22233445554446899988842 4445555554544 467887
Q ss_pred EECCCCh----------hh--HHHHHHHHhhhcCCcEEEe
Q 019107 247 GINCTSP----------RF--IHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 247 GvNC~~p----------~~--~~~~l~~l~~~~~~pl~vy 274 (346)
-+|+..| +. +...++.+++..+.|+++.
T Consensus 145 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK 184 (349)
T 1p0k_A 145 QIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVK 184 (349)
T ss_dssp EEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEE
T ss_pred EecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEE
Confidence 7776533 11 4567778877778999886
No 158
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=70.89 E-value=62 Score=29.43 Aligned_cols=98 Identities=11% Similarity=-0.056 Sum_probs=62.6
Q ss_pred HHHHHhCCCCEEEEcc-CC--------------CHHHHHHHHHHHHHhCCCCcEEEEEE----EcCCCcccCCCCHHHHH
Q 019107 174 VLILANSGADLIAFET-IP--------------NKLEAKAYAELLEEEGITIPAWFSFN----SKDGINVVSGDSILECA 234 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~av 234 (346)
++...++|+|.+.+-. .+ +++.++.+++.+++.+ +.|-..+. +++.+ -.+++.++
T Consensus 89 i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~----~~~~~~~~ 162 (302)
T 2ftp_A 89 FEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ--VRVRGYISCVLGCPYDG----DVDPRQVA 162 (302)
T ss_dssp HHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTB----CCCHHHHH
T ss_pred HHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCC----CCCHHHHH
Confidence 4556678999988622 21 2245677778888877 55544433 22222 24556665
Q ss_pred HHhh---cCCCceEEEECC----CChhhHHHHHHHHhhhc-CCcEEEee--CCC
Q 019107 235 SIAD---SCEQVVAVGINC----TSPRFIHGLILSVRKVT-SKPVIIYP--NSG 278 (346)
Q Consensus 235 ~~~~---~~~~~~avGvNC----~~p~~~~~~l~~l~~~~-~~pl~vyp--N~g 278 (346)
+.++ + .+++.|.+-= ..|..+..+++.+++.. +.||.+.. +.|
T Consensus 163 ~~~~~~~~-~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~G 215 (302)
T 2ftp_A 163 WVARELQQ-MGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYG 215 (302)
T ss_dssp HHHHHHHH-TTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTS
T ss_pred HHHHHHHH-cCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCcc
Confidence 5553 4 4677665542 35999999999998877 57999887 555
No 159
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=70.72 E-value=61 Score=29.30 Aligned_cols=152 Identities=16% Similarity=0.135 Sum_probs=84.0
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 68 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGES-PT-----LSHEEHKKVIEKVVDVV------------------------NG 68 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999996543 332211 11 34455556666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 69 r~pviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 125 (289)
T 2yxg_A 69 RVQVIAG-AGSN------------------CTEEAIE----LSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI 125 (289)
T ss_dssp SSEEEEE-CCCS------------------SHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-CCCC------------------CHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3446677 2221 3445444 455667789999987542 46778777777766653
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
++|+++==.. .++--.-+.+...+.+++.+++.+|=--|.....+..+++
T Consensus 126 -~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnivgiK~s~gd~~~~~~~~~ 175 (289)
T 2yxg_A 126 -NLPIVLYNVP---SRTAVNLEPKTVKLLAEEYSNISAVKEANPNLSQVSELIH 175 (289)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCSCTHHHHHHHH
T ss_pred -CCCEEEEeCc---cccCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHH
Confidence 6998853211 1111223445444444233444444434444555555544
No 160
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=70.61 E-value=31 Score=31.36 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=25.2
Q ss_pred CCChHHHHHHHHHHHHhhcceeeccccc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITASYQ 78 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~TnTy~ 78 (346)
.++++...++-+.--++|++++..-+|.
T Consensus 48 ~~~~e~a~~~a~~~k~~ga~~~k~~~~k 75 (276)
T 1vs1_A 48 VESWEQVREAALAVKEAGAHMLRGGAFK 75 (276)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECBSSC
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEeEEEe
Confidence 5789999999999999999999888886
No 161
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=70.59 E-value=26 Score=31.97 Aligned_cols=136 Identities=15% Similarity=0.041 Sum_probs=74.4
Q ss_pred HHHHHHHHHhCCCC---EEEEcc-----------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHH
Q 019107 170 HRRRVLILANSGAD---LIAFET-----------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (346)
Q Consensus 170 ~~~~i~~l~~~gvD---~i~~ET-----------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~ 235 (346)
|.+.++.+.++|+| +|-+-- ..+++.+..+++++++.- ++|+++-++.. + +-+.+.++++
T Consensus 108 ~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~----~-~~~~~~~~a~ 181 (314)
T 2e6f_A 108 NVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPY----F-DIAHFDTAAA 181 (314)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCC----C-CHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCC----C-CHHHHHHHHH
Confidence 45566667777888 665531 115666777788877752 58999877432 1 1123444455
Q ss_pred HhhcCCC-ceEEEECCCC--------------------------h---hhHHHHHHHHhhhc-CCcEEEeeCCCCccccc
Q 019107 236 IADSCEQ-VVAVGINCTS--------------------------P---RFIHGLILSVRKVT-SKPVIIYPNSGETYNAE 284 (346)
Q Consensus 236 ~~~~~~~-~~avGvNC~~--------------------------p---~~~~~~l~~l~~~~-~~pl~vypN~g~~~~~~ 284 (346)
.+.+ .+ +++|-+-.+. + ......++++++.. +.|+++ +.|.
T Consensus 182 ~~~~-aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~--~GGI----- 253 (314)
T 2e6f_A 182 VLNE-FPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFG--CGGV----- 253 (314)
T ss_dssp HHHT-CTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEE--ESSC-----
T ss_pred HHHh-cCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEE--ECCC-----
Confidence 5544 47 7876433211 1 01235666666666 667544 3331
Q ss_pred cccccccCCCChHHHHHHHHHHHHcCCeEEeecCC---CchHHHHHHHHHH
Q 019107 285 LKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCR---TTPNTIKAISRVL 332 (346)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCG---t~P~hI~al~~~~ 332 (346)
.++++..+ ++..||..|+=+-+ -+|..++.+++.+
T Consensus 254 ---------~~~~da~~----~l~~GAd~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 254 ---------YSGEDAFL----HILAGASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp ---------CSHHHHHH----HHHHTCSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred ---------CCHHHHHH----HHHcCCCEEEEchhhHhcCcHHHHHHHHHH
Confidence 12444443 44567776654333 2677776666554
No 162
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=70.40 E-value=60 Score=29.02 Aligned_cols=100 Identities=13% Similarity=0.067 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEE-----EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-CcccCCCC--HHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSGDS--ILEC 233 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-~~l~~G~~--~~~a 233 (346)
+.+++.. +++.+...|+|++ +++.+++..++...+..+++.-.++|++++|....+ |..+++.. -.+.
T Consensus 30 ~~~e~~~----~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~l 105 (257)
T 2yr1_A 30 DDRKVLR----EAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRL 105 (257)
T ss_dssp SHHHHHH----HHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHH
T ss_pred CHHHHHH----HHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHH
Confidence 5666654 4455566788887 457777777777777777775226899998876543 44323432 1223
Q ss_pred HHHhhcCCCceEEEECCCChhhHHHHHHHHhh
Q 019107 234 ASIADSCEQVVAVGINCTSPRFIHGLILSVRK 265 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~ 265 (346)
++.+.....++.|=|--..++.+..+++...+
T Consensus 106 l~~~~~~g~~d~iDvEl~~~~~~~~l~~~~~~ 137 (257)
T 2yr1_A 106 IEAICRSGAIDLVDYELAYGERIADVRRMTEE 137 (257)
T ss_dssp HHHHHHHTCCSEEEEEGGGTTHHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEEECCCChhHHHHHHHHHh
Confidence 33322221267777766544455556554433
No 163
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=70.29 E-value=32 Score=30.56 Aligned_cols=101 Identities=12% Similarity=0.072 Sum_probs=61.8
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++++...++|+|+++. |... ..+++++++.+ +|++..+ .++.++...++ .+++.|.+==+
T Consensus 97 ~~a~~Ai~AGA~fIvs---P~~~--~~vi~~~~~~g--i~~ipGv-----------~TptEi~~A~~--~Gad~vK~FPa 156 (232)
T 4e38_A 97 EQALAAKEAGATFVVS---PGFN--PNTVRACQEIG--IDIVPGV-----------NNPSTVEAALE--MGLTTLKFFPA 156 (232)
T ss_dssp HHHHHHHHHTCSEEEC---SSCC--HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEECST
T ss_pred HHHHHHHHcCCCEEEe---CCCC--HHHHHHHHHcC--CCEEcCC-----------CCHHHHHHHHH--cCCCEEEECcC
Confidence 4566788899999984 4432 23556677765 8888543 26788888765 47888888332
Q ss_pred ChhhHHHHHHHHhhhc-CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeE
Q 019107 252 SPRFIHGLILSVRKVT-SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASL 313 (346)
Q Consensus 252 ~p~~~~~~l~~l~~~~-~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 313 (346)
.+-.-...|+.++... +.|+ .|-.|. +++ .+++|++.|+..
T Consensus 157 ~~~gG~~~lkal~~p~p~ip~--~ptGGI---------------~~~----n~~~~l~aGa~~ 198 (232)
T 4e38_A 157 EASGGISMVKSLVGPYGDIRL--MPTGGI---------------TPS----NIDNYLAIPQVL 198 (232)
T ss_dssp TTTTHHHHHHHHHTTCTTCEE--EEBSSC---------------CTT----THHHHHTSTTBC
T ss_pred ccccCHHHHHHHHHHhcCCCe--eeEcCC---------------CHH----HHHHHHHCCCeE
Confidence 2211257777776543 3444 354442 232 245688888654
No 164
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=69.88 E-value=60 Score=30.42 Aligned_cols=133 Identities=15% Similarity=0.071 Sum_probs=76.4
Q ss_pred HHHHHHHHHhCCCC-EEEEccC-----------CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh
Q 019107 170 HRRRVLILANSGAD-LIAFETI-----------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (346)
Q Consensus 170 ~~~~i~~l~~~gvD-~i~~ET~-----------~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~ 237 (346)
|.+.++.+.+.++| +|-+.-- .+.+.+..+++++++.. ++||++-++.. .++.+.++.+
T Consensus 143 ~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~--------~~~~~~a~~~ 213 (345)
T 3oix_A 143 THTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPY--------FDIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCC--------CCHHHHHHHH
T ss_pred HHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCC--------CCHHHHHHHH
Confidence 34455566666765 7766521 35677788888888754 69999888642 2455655555
Q ss_pred hcC--CCceEEEECCCC--------------------------h---hhHHHHHHHHhhhc--CCcEEEeeCCCCccccc
Q 019107 238 DSC--EQVVAVGINCTS--------------------------P---RFIHGLILSVRKVT--SKPVIIYPNSGETYNAE 284 (346)
Q Consensus 238 ~~~--~~~~avGvNC~~--------------------------p---~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~~ 284 (346)
+.. .+++ ++|++. + ......+.++++.. +.|++. |.|.
T Consensus 214 ~~aga~~i~--~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg--~GGI----- 284 (345)
T 3oix_A 214 AIFNXYPLT--FVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIG--TGGV----- 284 (345)
T ss_dssp HHHTTSCCS--EEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEE--ESSC-----
T ss_pred HHhCCCceE--EEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEE--ECCC-----
Confidence 432 2333 334330 1 11135666777665 467654 3331
Q ss_pred cccccccCCCChHHHHHHHHHHHHcCCeEEeecCC---CchHHHHHHHHHHc
Q 019107 285 LKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCR---TTPNTIKAISRVLS 333 (346)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCG---t~P~hI~al~~~~~ 333 (346)
.++++..+ .+..|+..|.=+-+ .+|..++.|.+.+.
T Consensus 285 ---------~s~~da~~----~l~aGAd~V~igra~~~~gP~~~~~i~~~L~ 323 (345)
T 3oix_A 285 ---------XTGRDAFE----HILCGASMVQIGTALHQEGPQIFKRITKELX 323 (345)
T ss_dssp ---------CSHHHHHH----HHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred ---------CChHHHHH----HHHhCCCEEEEChHHHhcChHHHHHHHHHHH
Confidence 23444443 44578888776555 37888877776654
No 165
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=69.72 E-value=25 Score=30.68 Aligned_cols=90 Identities=22% Similarity=0.304 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcC-CCceEEEEC
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC-EQVVAVGIN 249 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~-~~~~avGvN 249 (346)
.+.++.+.+.|+|.+++-+++. .+...+++.+++.+ ..+++.++ ..+..+.++.+... .+...+ +.
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~~~-~~~~~~~~~~~~~g--~~~~~~i~---------~~t~~e~~~~~~~~~d~~i~~-~~ 164 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDLPV-FHAKEFTEIAREEG--IKTVFLAA---------PNTPDERLKVIDDMTTGFVYL-VS 164 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGHHHHHHHHHHHT--CEEEEEEC---------TTCCHHHHHHHHHHCSSEEEE-EC
T ss_pred HHHHHHHHHCCCCEEEECCCCh-hhHHHHHHHHHHhC--CCeEEEEC---------CCCHHHHHHHHHhcCCCeEEE-EE
Confidence 3467778889999999988765 56777888888877 66776652 12234444444321 122222 11
Q ss_pred CC---C-----hhhHHHHHHHHhhhcCCcEEE
Q 019107 250 CT---S-----PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~---~-----p~~~~~~l~~l~~~~~~pl~v 273 (346)
.. + +......++++++..+.|+++
T Consensus 165 ~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~ 196 (248)
T 1geq_A 165 LYGTTGAREEIPKTAYDLLRRAKRICRNKVAV 196 (248)
T ss_dssp CC-------CCCHHHHHHHHHHHHHCSSCEEE
T ss_pred CCccCCCCCCCChhHHHHHHHHHhhcCCCEEE
Confidence 11 1 123455777777766777654
No 166
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=69.71 E-value=21 Score=34.37 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=42.3
Q ss_pred HHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 172 RRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
++++.+.++|||+|++.|- .+.......++.+++.- +.|+++.-. .+.+++.... + .++++|.+.
T Consensus 147 e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~-~i~Vi~g~V----------~t~e~A~~a~-~-aGAD~I~vG 212 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKELI-E-NGADGIKVG 212 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTC-CCEEEEEEE----------CSHHHHHHHH-H-TTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcC-CCeEEEeec----------CCHHHHHHHH-H-cCCCEEEEe
Confidence 5788899999999998743 34444455666666642 488887311 2455555544 3 478888884
No 167
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=69.69 E-value=57 Score=29.49 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=53.6
Q ss_pred ccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhh-cCCcEEE--eeCCCCccccc--cccc----cc---c
Q 019107 224 VVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKV-TSKPVII--YPNSGETYNAE--LKKW----VE---S 291 (346)
Q Consensus 224 l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~-~~~pl~v--ypN~g~~~~~~--~~~~----~~---~ 291 (346)
+.||..+..+.....+ .+ +..+.+..+++++++. .+.|+++ |-|.-..|... .... .. -
T Consensus 61 ~aDGpvIq~a~~rAL~-~G--------~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 61 LADGPTIQGANLRALA-AK--------TTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp GGCCSHHHHHHHHHHH-TT--------CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHH-cC--------CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 4588888777665433 23 3466677777877765 5778655 55531111000 0000 00 0
Q ss_pred CCCChHHHHHHHHHHHHcCCeEEeecCCCc-hHHHHHHHHH
Q 019107 292 TGVRDEDFVSYIGKWRDAGASLFGGCCRTT-PNTIKAISRV 331 (346)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~G~~ivGGCCGt~-P~hI~al~~~ 331 (346)
..+.+++..++.+...+.|...|==|.-++ ++.|+++++.
T Consensus 132 pDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~ 172 (271)
T 3nav_A 132 ADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQL 172 (271)
T ss_dssp TTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHH
Confidence 123455555666666677777666666654 4666666655
No 168
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=69.40 E-value=35 Score=29.93 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=35.9
Q ss_pred HHHHHHHhCCCCEEEE-----ccCCCHHHHHHHHHHHHHh-CCCCcEEEEEEEcC
Q 019107 172 RRVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEE-GITIPAWFSFNSKD 220 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~-----ET~~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~ 220 (346)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+. +.++|+-+.+-+.+
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~ 75 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSK 75 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSC
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCC
Confidence 4677788899999987 4557777666777888876 34688888876643
No 169
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=69.24 E-value=35 Score=30.16 Aligned_cols=99 Identities=12% Similarity=0.113 Sum_probs=62.3
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEc--CCC-------cccCCCCHHHHHHHhhcCCCc
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK--DGI-------NVVSGDSILECASIADSCEQV 243 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~--~~~-------~l~~G~~~~~av~~~~~~~~~ 243 (346)
.++.+.+.|+|-+++-|.. +..-..+.+++++++ +-.+++++.+. .+. +-.++.++.+.+..+.. .++
T Consensus 89 ~~~~~l~~GadkVii~t~a-~~~p~li~e~~~~~g-~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~-~g~ 165 (243)
T 4gj1_A 89 EVKALLDCGVKRVVIGSMA-IKDATLCLEILKEFG-SEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSN-KGL 165 (243)
T ss_dssp HHHHHHHTTCSEEEECTTT-TTCHHHHHHHHHHHC-TTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHT-TTC
T ss_pred HHHHHHHcCCCEEEEcccc-ccCCchHHHHHhccc-CceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhh-cCC
Confidence 4555777999999998753 223344556777777 56788888763 221 23356678888888765 477
Q ss_pred eEEEECCCChhh-----HHHHHHHHhhhc-CCcEEEe
Q 019107 244 VAVGINCTSPRF-----IHGLILSVRKVT-SKPVIIY 274 (346)
Q Consensus 244 ~avGvNC~~p~~-----~~~~l~~l~~~~-~~pl~vy 274 (346)
.-+-+++..-+- =..+++.+.+.. +.|+++-
T Consensus 166 ~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 166 KHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp CEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEE
T ss_pred cEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEE
Confidence 888888753211 135677777654 5787663
No 170
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=69.03 E-value=69 Score=29.23 Aligned_cols=101 Identities=15% Similarity=0.077 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC------cccCCCC--HHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI------NVVSGDS--ILEC 233 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~------~l~~G~~--~~~a 233 (346)
+.++.. +..++.+.++|++.+-+|-- .|....++++.+.+ .||+-.+-+.+.. ...-|.+ ..++
T Consensus 110 s~~~a~---~na~rl~~eaGa~aVklEdg---~e~~~~I~al~~ag--IpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~ 181 (281)
T 1oy0_A 110 GPTAAL---AAATRFLKDGGAHAVKLEGG---ERVAEQIACLTAAG--IPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQT 181 (281)
T ss_dssp CHHHHH---HHHHHHHHTTCCSEEEEEBS---GGGHHHHHHHHHHT--CCEEEEEECCC--------------CHHHHHH
T ss_pred CHHHHH---HHHHHHHHHhCCeEEEECCc---HHHHHHHHHHHHCC--CCEEeeecCCcceecccCCeEEEeCcHHHHHH
Confidence 455443 33455566799999999976 35555666677766 9999666544321 1122322 2334
Q ss_pred HHHhh--cCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEe
Q 019107 234 ASIAD--SCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 234 v~~~~--~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vy 274 (346)
++.+. ...|+++|=+-|... .+.+.+.+..+.|++..
T Consensus 182 i~rA~a~~eAGA~~ivlE~vp~----~~a~~it~~l~iP~igI 220 (281)
T 1oy0_A 182 IADAIAVAEAGAFAVVMEMVPA----ELATQITGKLTIPTVGI 220 (281)
T ss_dssp HHHHHHHHHHTCSEEEEESCCH----HHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHcCCcEEEEecCCH----HHHHHHHHhCCCCEEEe
Confidence 43322 125889999999853 34556666667897653
No 171
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=68.98 E-value=43 Score=31.25 Aligned_cols=151 Identities=14% Similarity=0.080 Sum_probs=90.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------CHH-H---HHHHHHHHHHhCCCCc
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEEEGITIP 211 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~~-E---~~a~~~a~~~~~~~~p 211 (346)
++|.+|+ .+.|.+.++.+.++|.|.|=+--- | +++ . +..+++++++.- +.|
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 4666665 556777788788899998844321 1 121 2 344566666654 689
Q ss_pred EEEEEEEcCCCcccCCCCHH---HHHHHhhcCCCceEEEECCC---------ChhhHHHHHHHHhhhcCCcEEEeeCCCC
Q 019107 212 AWFSFNSKDGINVVSGDSIL---ECASIADSCEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVIIYPNSGE 279 (346)
Q Consensus 212 v~is~~~~~~~~l~~G~~~~---~av~~~~~~~~~~avGvNC~---------~p~~~~~~l~~l~~~~~~pl~vypN~g~ 279 (346)
|+|-++..+- ...|.++. +.++.+.+ .+++.|=+-.. .+..-..+++.+++..+.|+++- .|
T Consensus 212 v~vRls~~~~--~~~g~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~--Gg- 285 (340)
T 3gr7_A 212 LFVRISASDY--HPDGLTAKDYVPYAKRMKE-QGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV--GL- 285 (340)
T ss_dssp EEEEEESCCC--STTSCCGGGHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE--SS-
T ss_pred eEEEeccccc--cCCCCCHHHHHHHHHHHHH-cCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee--CC-
Confidence 9998886532 12344444 45555554 47888777432 23334567788888778897652 22
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHHHHcC
Q 019107 280 TYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISRVLSN 334 (346)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~~~~~ 334 (346)
+ .++++ +.+.++.| +.+|+=+=. .+|+-.+.+++.+..
T Consensus 286 I-------------~s~e~----a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~~l~~ 326 (340)
T 3gr7_A 286 I-------------TSGWQ----AEEILQNGRADLVFLGRELLRNPYWPYAAARELGA 326 (340)
T ss_dssp C-------------CCHHH----HHHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred C-------------CCHHH----HHHHHHCCCeeEEEecHHHHhCchHHHHHHHHCCC
Confidence 1 12332 33466677 777764333 478888888887754
No 172
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=68.48 E-value=19 Score=31.47 Aligned_cols=95 Identities=9% Similarity=-0.019 Sum_probs=54.7
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC-cc-----cCCCCHHHHHHHhhcCCCceEEE
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI-NV-----VSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~-~l-----~~G~~~~~av~~~~~~~~~~avG 247 (346)
++.+.+.|+|.+++-+.. +.+-..+.++ ++.+ ..+++++.++... .+ .++.+..+.+..+.. .++..|.
T Consensus 88 ~~~~~~~Gad~V~lg~~~-l~~p~~~~~~-~~~g--~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~-~G~~~i~ 162 (241)
T 1qo2_A 88 AEKLRKLGYRRQIVSSKV-LEDPSFLKSL-REID--VEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKE-YGLEEIV 162 (241)
T ss_dssp HHHHHHTTCCEEEECHHH-HHCTTHHHHH-HTTT--CEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHT-TTCCEEE
T ss_pred HHHHHHCCCCEEEECchH-hhChHHHHHH-HHcC--CcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHh-CCCCEEE
Confidence 344555799999876531 2222223344 4444 4566777665311 11 123367777766655 4788888
Q ss_pred ECCCChhhH-----HHHHHHHhhhcCCcEEE
Q 019107 248 INCTSPRFI-----HGLILSVRKVTSKPVII 273 (346)
Q Consensus 248 vNC~~p~~~-----~~~l~~l~~~~~~pl~v 273 (346)
++-...+.. ..+++++.+..+.|+++
T Consensus 163 ~t~~~~~g~~~g~~~~~i~~l~~~~~iPvia 193 (241)
T 1qo2_A 163 HTEIEKDGTLQEHDFSLTKKIAIEAEVKVLA 193 (241)
T ss_dssp EEETTHHHHTCCCCHHHHHHHHHHHTCEEEE
T ss_pred EEeecccccCCcCCHHHHHHHHHhcCCcEEE
Confidence 877543221 46777777777888765
No 173
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=68.31 E-value=1.1e+02 Score=31.61 Aligned_cols=65 Identities=9% Similarity=0.121 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-c--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+++.+.++.+.+.|+|.|.+= | +..+.++..+++++++.-. .+.++|.+.++. |..++.++..++
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p--~~~I~~H~Hnd~----GlAvANslaAve 328 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP--DLPLHIHTHDTS----GAGVAAMLACAQ 328 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST--TCCEEEECCCTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC--CCeEEEEECCCc----cHHHHHHHHHHH
Confidence 456667888888999999765 3 2368899999999887421 355788887754 444444444443
No 174
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=68.30 E-value=75 Score=29.36 Aligned_cols=151 Identities=13% Similarity=0.091 Sum_probs=89.9
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------C----HHHHHHHHHHHHHhCCCCc
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------N----KLEAKAYAELLEEEGITIP 211 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~----~~E~~a~~~a~~~~~~~~p 211 (346)
.++.+|+ .+.|.+.++.+.++|.|.|=+--- | + ..-+..+++++++.- +.|
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 3566665 456777788888899999844321 1 1 122455666666654 689
Q ss_pred EEEEEEEcCCCcccCCCCHHHHHHHh---hcCCCceEEEECCC---------ChhhHHHHHHHHhhhcCCcEEEeeCCCC
Q 019107 212 AWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCT---------SPRFIHGLILSVRKVTSKPVIIYPNSGE 279 (346)
Q Consensus 212 v~is~~~~~~~~l~~G~~~~~av~~~---~~~~~~~avGvNC~---------~p~~~~~~l~~l~~~~~~pl~vypN~g~ 279 (346)
+.+-++..+. ...|.+..++++.+ .+ .+++.|-+-.. .|..-..+++.+++..+.|+++ |.|.
T Consensus 212 v~vris~~~~--~~~g~~~~~~~~~a~~l~~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~Ggi 286 (338)
T 1z41_A 212 LFVRVSASDY--TDKGLDIADHIGFAKWMKE-QGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA--VGMI 286 (338)
T ss_dssp EEEEEECCCC--STTSCCHHHHHHHHHHHHH-TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE--CSSC
T ss_pred EEEEecCccc--CCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE--ECCC
Confidence 9988876543 23577776655544 33 47787776432 1223356677777777888765 3331
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHHHHcC
Q 019107 280 TYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISRVLSN 334 (346)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~~~~~ 334 (346)
.++++. .+.++.| +.+|+=+=. .+|+-.+.+++-+..
T Consensus 287 --------------~s~~~a----~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~~~~~ 326 (338)
T 1z41_A 287 --------------TDGSMA----EEILQNGRADLIFIGRELLRDPFFARTAAKQLNT 326 (338)
T ss_dssp --------------CSHHHH----HHHHHTTSCSEEEECHHHHHCTTHHHHHHHHTTC
T ss_pred --------------CCHHHH----HHHHHcCCceEEeecHHHHhCchHHHHHHcCCCc
Confidence 123333 3356666 777664222 368888888776643
No 175
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=67.90 E-value=11 Score=32.83 Aligned_cols=97 Identities=20% Similarity=0.139 Sum_probs=52.3
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-----CcccCC-----CCHHHHHHHhhcCCCc
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----INVVSG-----DSILECASIADSCEQV 243 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-----~~l~~G-----~~~~~av~~~~~~~~~ 243 (346)
++.+.+.|+|.+.+-+- .+.+...+.++.+..+ ...+.+++.+..+ -.+..| .+..+.+..+.. .++
T Consensus 92 ~~~~~~~Gad~V~i~~~-~~~~~~~~~~~~~~~g-~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~-~G~ 168 (253)
T 1h5y_A 92 ATTLFRAGADKVSVNTA-AVRNPQLVALLAREFG-SQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEE-LGA 168 (253)
T ss_dssp HHHHHHHTCSEEEESHH-HHHCTHHHHHHHHHHC-GGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHH-HTC
T ss_pred HHHHHHcCCCEEEEChH-HhhCcHHHHHHHHHcC-CCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHh-CCC
Confidence 44455579999997652 1222223444455544 1235566655421 111122 355566666654 368
Q ss_pred eEEEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 244 VAVGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 244 ~avGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
+.|.++...++. -...++.+++..+.|+++
T Consensus 169 d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia 203 (253)
T 1h5y_A 169 GEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIA 203 (253)
T ss_dssp SEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred CEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEE
Confidence 888887654321 245667776666778655
No 176
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=67.63 E-value=51 Score=29.63 Aligned_cols=61 Identities=13% Similarity=0.274 Sum_probs=39.1
Q ss_pred CCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh-------------hhHHHHHHHHhhhcCCcEEEee
Q 019107 209 TIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP-------------RFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p-------------~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+.|+++++...+ -+.+.++++.+....++++|-+|+..| +.+..+++.+++..+.|+++.-
T Consensus 98 ~~p~~v~l~~~~------~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~ 171 (311)
T 1ep3_A 98 ELPIIANVAGSE------EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKL 171 (311)
T ss_dssp TSCEEEEECCSS------HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCcEEEEEcCCC------HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 589999995321 123445555554314788887777533 4457788888877788988764
No 177
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=67.59 E-value=70 Score=28.72 Aligned_cols=70 Identities=9% Similarity=0.124 Sum_probs=45.5
Q ss_pred HHHHHHHHHh-CCCCEEEEccC------------CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 170 HRRRVLILAN-SGADLIAFETI------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 170 ~~~~i~~l~~-~gvD~i~~ET~------------~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
|.+.++.+.+ +|+|.|-+.-. .+...+..+++.+++.- +.|+++-++. +-+++.+.+..
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~~-------~~~~~~~~a~~ 184 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLSP-------NVTDIVPIAKA 184 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCSHHHHHH
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEECC-------ChHHHHHHHHH
Confidence 5556666776 89998865311 24555677778787763 5899887752 11345666666
Q ss_pred hhcCCCceEEEE
Q 019107 237 ADSCEQVVAVGI 248 (346)
Q Consensus 237 ~~~~~~~~avGv 248 (346)
+.+ .++++|-+
T Consensus 185 l~~-~G~d~i~v 195 (311)
T 1ep3_A 185 VEA-AGADGLTM 195 (311)
T ss_dssp HHH-TTCSEEEE
T ss_pred HHH-cCCCEEEE
Confidence 655 47888777
No 178
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=67.46 E-value=72 Score=28.85 Aligned_cols=152 Identities=16% Similarity=0.104 Sum_probs=84.5
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 69 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEA-S-----TLSMEEHTQVIKEIIRVA------------------------NK 69 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcccccc-c-----cCCHHHHHHHHHHHHHHh------------------------CC
Confidence 567888888888999999554 3333321 1 134455556666555433 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+ -++.+++..-.+.+.+..
T Consensus 70 r~pviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 70 RIPIIAG-TGAN------------------STREAIE----LTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAV 126 (291)
T ss_dssp SSCEEEE-CCCS------------------SHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEe-CCCC------------------CHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346777 3221 3455544 55666778999998764 246777777777766654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++== + ..++-..-+++...+.. +.+++.+|=--|.....+..+++.
T Consensus 127 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnivgiK~ssgd~~~~~~~~~~ 176 (291)
T 3tak_A 127 -ELPLILYN-V--PGRTGVDLSNDTAVRLA-EIPNIVGIKDATGDVPRGKALIDA 176 (291)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHH
T ss_pred -CCCEEEEe-c--ccccCCCCCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHHH
Confidence 69998532 1 11211223445444443 434443333334445556555544
No 179
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=67.41 E-value=72 Score=28.79 Aligned_cols=145 Identities=12% Similarity=0.074 Sum_probs=79.8
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 66 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLG-PA-----LSLQEKMELTDAATSAA------------------------RR 66 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG-GG-----SCHHHHHHHHHHHHHHC------------------------SS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 5677888888889999996543 332211 11 34455555555554321 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHh
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~ 206 (346)
+|+|. |. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 67 ---vi~Gv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 67 ---VIVQV-AS------------------LNADEAIA----LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp ---EEEEC-CC------------------SSHHHHHH----HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred ---EEEee-CC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 67772 22 13445443 566677799999987543 5667777777766665
Q ss_pred CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
. ++|+++==.. +++--.-+.+...+ .+++.+|=--|.....+..+++
T Consensus 121 ~-~lPiilYn~P---~~tg~~l~~~~~~~----~pnivgiKds~gd~~~~~~~~~ 167 (286)
T 2r91_A 121 V-SIPVFLYNYP---AAVGRDVDARAAKE----LGCIRGVKDTNESLAHTLAYKR 167 (286)
T ss_dssp C-SSCEEEEECH---HHHSSCCCHHHHHH----HSCEEEEEECCSCHHHHHHHHH
T ss_pred c-CCCEEEEeCh---hhcCCCCCHHHHHh----cCCEEEEEeCCCCHHHHHHHHh
Confidence 3 6998853211 11111123443443 2444444444445555555554
No 180
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=67.28 E-value=53 Score=33.28 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=67.5
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------C----HHHHHHHHHHHHH-hCCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------N----KLEAKAYAELLEE-EGITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~----~~E~~a~~~a~~~-~~~~~ 210 (346)
.++.+|+ .+.|.+.++...++|.|.|=+--- | + ..-+..+++++++ .+.+.
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~ 209 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDF 209 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCc
Confidence 3566665 456777788888899999844210 1 1 1224445555655 45578
Q ss_pred cEEEEEEEcCCCcccCCCCHHHHHHHh---hcCCCceEEEEC-----CCCh--------hhHHHHHHHHhhhcCCcEEE
Q 019107 211 PAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGIN-----CTSP--------RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 211 pv~is~~~~~~~~l~~G~~~~~av~~~---~~~~~~~avGvN-----C~~p--------~~~~~~l~~l~~~~~~pl~v 273 (346)
|+++-++..+. ...|.++.++++.+ ++ .+++.|.+- ...| ......++.+++..+.|+++
T Consensus 210 ~v~vrls~~~~--~~~g~~~~~~~~~a~~l~~-~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~ 285 (671)
T 1ps9_A 210 IIIYRLSMLDL--VEDGGTFAETVELAQAIEA-AGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT 285 (671)
T ss_dssp EEEEEEEEECC--STTCCCHHHHHHHHHHHHH-HTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE
T ss_pred eEEEEECcccc--CCCCCCHHHHHHHHHHHHh-cCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEE
Confidence 99988887543 23577777665544 33 467877652 1101 12346778888888899776
No 181
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=67.23 E-value=77 Score=29.06 Aligned_cols=135 Identities=10% Similarity=0.019 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhCCCCEE-EEccC---CCHHH--------HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 169 FHRRRVLILANSGADLI-AFETI---PNKLE--------AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i-~~ET~---~~~~E--------~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
...+.++.+.++|+|.+ ++++. -+.+. .+.+++.+++.+ +.|++ -|++ |. ...+..
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~-g~~~i-~~~~--------g~--~~~l~~ 247 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDFS-DTPVI-YFFR--------GS--SSFIDL 247 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHC-CCCEE-EEES--------SH--HHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhcC-CCCEE-EEcC--------Cc--HHHHHH
Confidence 34444555667999987 45654 23332 334456666652 37755 4432 32 345555
Q ss_pred hhcCCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHc-CC---
Q 019107 237 ADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDA-GA--- 311 (346)
Q Consensus 237 ~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~--- 311 (346)
+.. .++++++++-. .+..+.. .+ + +.++-|- |+ .... -++++..+.+++.++. |.
T Consensus 248 l~~-~g~d~~~~d~~~dl~~~~~---~~----~--~~l~Gn~----dp---~~l~---gt~e~i~~~v~~~l~~~g~~~g 307 (338)
T 2eja_A 248 AVD-YRADALSVDWSVDIPELFK---IY----D--KGFQGNL----EP---AVLY---ASEEVIEEKTLGLLRRIPVKTR 307 (338)
T ss_dssp HTT-SCCSEEECCTTSCHHHHHH---HC----C--SEEECCB----CG---GGGG---SCHHHHHHHHHHHHTTCCCSSS
T ss_pred HHH-cCCCEEEeCCCCCHHHHHH---hC----C--eEEEECC----CH---HHhc---CCHHHHHHHHHHHHHHhCCCCC
Confidence 544 47899988754 4332222 22 1 2344332 21 1121 2578899999999875 54
Q ss_pred eEEeecCC----CchHHHHHHHHHHcCC
Q 019107 312 SLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 312 ~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
-|++--|| |.|++++++.+.++..
T Consensus 308 ~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 308 YVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp EEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 57787776 6889999999998875
No 182
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=66.91 E-value=63 Score=29.71 Aligned_cols=97 Identities=7% Similarity=-0.041 Sum_probs=64.2
Q ss_pred HHHHHHhCCCCEEEEccCC--------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
-++.+.++|++.+-+|-.. +.+|...=++++++.-.+.+++|.-..+.- . ...++++++.+.
T Consensus 103 ~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~--~--~~gldeai~Ra~ 178 (298)
T 3eoo_A 103 TIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA--A--AEGIDAAIERAI 178 (298)
T ss_dssp HHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH--H--HHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh--h--hcCHHHHHHHHH
Confidence 3667788999999999643 456666666666654334677777655432 2 234778887764
Q ss_pred c--CCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 239 S--CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 239 ~--~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
. ..|+++|-+-|. .++.+..+.+.+ +.|+++-+-.
T Consensus 179 ay~~AGAD~if~~~~~~~ee~~~~~~~~----~~Pl~~n~~~ 216 (298)
T 3eoo_A 179 AYVEAGADMIFPEAMKTLDDYRRFKEAV----KVPILANLTE 216 (298)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHH----CSCBEEECCT
T ss_pred hhHhcCCCEEEeCCCCCHHHHHHHHHHc----CCCeEEEecc
Confidence 3 258899999997 467666666655 4888765543
No 183
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=66.85 E-value=13 Score=32.48 Aligned_cols=94 Identities=17% Similarity=0.162 Sum_probs=53.7
Q ss_pred HHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEc----C-CCcccCCC-----CHHHHHHHhhcC
Q 019107 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSK----D-GINVVSGD-----SILECASIADSC 240 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~----~-~~~l~~G~-----~~~~av~~~~~~ 240 (346)
+++.+.+.|+|.+.+-+ ++++..+ .++.++.+ ..+.+++.+. + .-++. |. ++.+.+..+.+
T Consensus 88 ~~~~~l~~Gad~V~lg~~~l~~p~~~---~~~~~~~g--~~~~~~ld~~~~~~~~~v~~~-g~~~~~~~~~e~~~~~~~- 160 (244)
T 2y88_A 88 SLAAALATGCARVNVGTAALENPQWC---ARVIGEHG--DQVAVGLDVQIIDGEHRLRGR-GWETDGGDLWDVLERLDS- 160 (244)
T ss_dssp HHHHHHHTTCSEEEECHHHHHCHHHH---HHHHHHHG--GGEEEEEEEEEETTEEEEEEG-GGTEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEECchHhhChHHH---HHHHHHcC--CCEEEEEeccccCCCCEEEEC-CccCCCCCHHHHHHHHHh-
Confidence 45666778999998764 4454433 44444444 3455566554 1 11222 21 45566666655
Q ss_pred CCceEEEECCCChh-----hHHHHHHHHhhhcCCcEEE
Q 019107 241 EQVVAVGINCTSPR-----FIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 241 ~~~~avGvNC~~p~-----~~~~~l~~l~~~~~~pl~v 273 (346)
.+++.|.++...++ .-..+++++.+..+.|+++
T Consensus 161 ~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia 198 (244)
T 2y88_A 161 EGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIA 198 (244)
T ss_dssp TTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEE
T ss_pred CCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEE
Confidence 47788888774321 2345677777666778655
No 184
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=66.65 E-value=42 Score=31.91 Aligned_cols=65 Identities=8% Similarity=0.024 Sum_probs=41.4
Q ss_pred HHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 172 RRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
++++.+.++|+|++.+-+ ..+......+++.+++.-.++|+++. .+.+.+++.... + .++++|.+
T Consensus 156 ~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~----------~v~~~~~a~~a~-~-~Gad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAG----------NIVTKEAALDLI-S-VGADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEE----------EECSHHHHHHHH-T-TTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEc----------CCCcHHHHHHHH-h-cCCCEEEE
Confidence 456667789999998743 33445566667777775215899872 123455554443 4 47899888
No 185
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=66.22 E-value=65 Score=27.86 Aligned_cols=90 Identities=13% Similarity=0.088 Sum_probs=48.5
Q ss_pred HHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEE
Q 019107 173 RVLILANSGADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avG 247 (346)
.++.+.++|+|.|-+-++ ++... ..++.+++.. ++|+++.--+ .++.++-..++ .++++|.
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~ggI---------~~~~~~~~~l~--~Gad~V~ 102 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNR--ALIAEVAQAM-DIKVELSGGI---------RDDDTLAAALA--TGCTRVN 102 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCH--HHHHHHHHHC-SSEEEEESSC---------CSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChH--HHHHHHHHhc-CCcEEEECCc---------CCHHHHHHHHH--cCCCEEE
Confidence 456677899999976432 22222 2333444432 5999874322 23455443343 3677777
Q ss_pred ECCC---ChhhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 248 INCT---SPRFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 248 vNC~---~p~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
+... .|+.+..+++.+.. +.-+.+-+..|
T Consensus 103 lg~~~l~~p~~~~~~~~~~g~--~~~~~l~~~~g 134 (244)
T 1vzw_A 103 LGTAALETPEWVAKVIAEHGD--KIAVGLDVRGT 134 (244)
T ss_dssp ECHHHHHCHHHHHHHHHHHGG--GEEEEEEEETT
T ss_pred ECchHhhCHHHHHHHHHHcCC--cEEEEEEccCC
Confidence 7653 56666666666532 22344444433
No 186
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=66.06 E-value=5.5 Score=36.55 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
+.+++ +--.++++++.++|+|.|++|-+|+. +++.+.+. . ++|++ .+
T Consensus 168 t~~~a-~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~---l--~iP~i-gI 214 (275)
T 3vav_A 168 TEAGA-AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRE---L--SIPTI-GI 214 (275)
T ss_dssp SHHHH-HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHH---C--SSCEE-EE
T ss_pred CHHHH-HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHh---C--CCCEE-EE
Confidence 43444 44556889999999999999999986 66655443 2 48875 44
No 187
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=66.03 E-value=83 Score=29.02 Aligned_cols=84 Identities=15% Similarity=0.137 Sum_probs=47.0
Q ss_pred HHHHHhCCCCEEEEc-cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCC--CHHHHHHHhhcCCCceEEEECC
Q 019107 174 VLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 174 i~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~--~~~~av~~~~~~~~~~avGvNC 250 (346)
++.+.+.|+|.|-+. ++.++.+++. ..+.+..++= .+++...|..|+ .+.+.+..+-.. +...++..|
T Consensus 255 l~~~~~~g~d~i~~d~~~~~~~~~k~------~~g~~~~l~G--nldp~~~l~~g~~e~i~~~v~~~l~~-~g~I~~~Gh 325 (348)
T 4ay7_A 255 LSDMADCGFEGLSVEEKIGSAKKGKE------VIGTRARLVG--NVSSPFTLLPGPVDKIKAEAKEALEG-GIDVLAPGC 325 (348)
T ss_dssp HHHHHTSCCSEEECCGGGCCHHHHHH------HHTTSSEEEE--EECCCCCCTTCCHHHHHHHHHHHHHT-TCSEEEESS
T ss_pred HHHHHHhccccccccchhhHHHHHHH------HhCCCEEEEc--CCCChHhhcCCCHHHHHHHHHHHHhC-CCCEEeCCC
Confidence 455778999999775 5556655432 2342344443 344445566664 233333332222 345677778
Q ss_pred C-----ChhhHHHHHHHHhhh
Q 019107 251 T-----SPRFIHGLILSVRKV 266 (346)
Q Consensus 251 ~-----~p~~~~~~l~~l~~~ 266 (346)
. .|+.+..+++..++.
T Consensus 326 gi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 326 GIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp SCCTTCCHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHh
Confidence 5 357788887776553
No 188
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=66.02 E-value=86 Score=29.23 Aligned_cols=48 Identities=19% Similarity=0.186 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEccCC---------------C---HHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 164 ETLKEFHRRRVLILANSGADLIAFETIP---------------N---KLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD~i~~ET~~---------------~---~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
+...++|.++++ .|+-+|+.|-.. + +...+.+.+++++.| .++++.+.
T Consensus 37 ~~~~~yy~~rA~----gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~~G--~~i~~QL~ 102 (343)
T 3kru_A 37 DWHIVHYATRAI----GGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANG--AVMGIQLA 102 (343)
T ss_dssp HHHHHHHHHHHH----TTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred ceeeeeeehhhc----cceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhcCC--ceEeeehh
Confidence 778889988776 788888877321 2 234555677777776 67777774
No 189
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=65.86 E-value=31 Score=32.43 Aligned_cols=151 Identities=13% Similarity=0.059 Sum_probs=86.9
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------CHH-H---HHHHHHHHHHh-CCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEEE-GITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~~-E---~~a~~~a~~~~-~~~~ 210 (346)
++|.+|+ .+.|.+.++...++|.|.|=+--- | +++ . +..+++++++. +.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4666654 556777788888899998843311 1 222 2 33455566653 4467
Q ss_pred cEEEEEEEcCCCcccCC-CCHHHHHH---HhhcCCCceEEEECCC----------ChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 211 PAWFSFNSKDGINVVSG-DSILECAS---IADSCEQVVAVGINCT----------SPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 211 pv~is~~~~~~~~l~~G-~~~~~av~---~~~~~~~~~avGvNC~----------~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
|+.+-++..+-. ..| .++.+++. .+.+ .+++.|-+-.. .+..-..+++.+++..+.|+++ +
T Consensus 227 pV~vRis~~~~~--~~G~~~~~~~~~la~~L~~-~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~--~ 301 (363)
T 3l5l_A 227 PLTARFGVLEYD--GRDEQTLEESIELARRFKA-GGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS--A 301 (363)
T ss_dssp CEEEEEEEECSS--SCHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE--C
T ss_pred eEEEEecchhcC--CCCCCCHHHHHHHHHHHHH-cCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE--e
Confidence 999999874321 234 45555544 3444 47787766542 1323456777777777888765 2
Q ss_pred CCCccccccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHHHHc
Q 019107 277 SGETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISRVLS 333 (346)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~~~~ 333 (346)
.| +. ++++ +.+.++.| +.+|+=+=. .+|+-.+++++.+.
T Consensus 302 Gg-I~-------------s~e~----a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 302 WG-FG-------------TPQL----AEAALQANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp SS-TT-------------SHHH----HHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred CC-CC-------------CHHH----HHHHHHCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 32 11 2332 23456666 777663322 36777777777764
No 190
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=65.59 E-value=30 Score=31.56 Aligned_cols=98 Identities=9% Similarity=0.018 Sum_probs=59.6
Q ss_pred HHHHHhCCCCEEEEccCCC---------------HHHHHHHHHHHHHhCCCCcEEEEEE----EcCCCcccCCCCHHHHH
Q 019107 174 VLILANSGADLIAFETIPN---------------KLEAKAYAELLEEEGITIPAWFSFN----SKDGINVVSGDSILECA 234 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~---------------~~E~~a~~~a~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~av 234 (346)
++.+.++|+|.+-+=.-.+ ++.++.+++.+++.+ ++|.+.+. +++.++. +-+.+.+.+
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G--~~v~~~l~~~~~~~~~~~~-~~~~~~~~~ 162 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSAN--ISVRGYVSCALGCPYEGKI-SPAKVAEVT 162 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTT--CEEEEEEETTTCBTTTBSC-CHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CeEEEEEEEEeeCCcCCCC-CHHHHHHHH
Confidence 5566778999886543222 235666778888877 66655543 3333321 112233344
Q ss_pred HHhhcCCCceEEEECC----CChhhHHHHHHHHhhhc-CCcEEEee
Q 019107 235 SIADSCEQVVAVGINC----TSPRFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC----~~p~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
+.+.+ .+++.|.+.= ..|..+..+++.+++.. +.|+.+..
T Consensus 163 ~~~~~-~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~ 207 (298)
T 2cw6_A 163 KKFYS-MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHC 207 (298)
T ss_dssp HHHHH-TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEE
T ss_pred HHHHH-cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 44444 4777766653 35999999999998876 46777764
No 191
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=65.55 E-value=79 Score=28.63 Aligned_cols=145 Identities=10% Similarity=0.014 Sum_probs=79.8
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++++.+++.+ .
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~~-----Ls~eEr~~v~~~~~~~~------------------------~- 66 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGTTGLG-PS-----LSPEEKLENLKAVYDVT------------------------N- 66 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG-GG-----SCHHHHHHHHHHHHTTC------------------------S-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHc------------------------C-
Confidence 567888888888999999544 3343211 11 34444445554444321 1
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHh
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~ 206 (346)
. +|+|. |. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 67 -g-viaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 67 -K-IIFQV-GG------------------LNLDDAIR----LAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp -C-EEEEC-CC------------------SCHHHHHH----HHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH
T ss_pred -C-EEEec-CC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2 67772 22 13445443 566778899999987542 5677777777666664
Q ss_pred CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
. ++|+++==.. +++--.-+.+...+ ..++.+|=--|.....+..+++
T Consensus 122 ~-~lPiilYn~P---~~tg~~l~~~~~~~----~pnIvgiKds~gd~~~~~~~~~ 168 (293)
T 1w3i_A 122 S-PHPVYLYNYP---TATGKDIDAKVAKE----IGCFTGVKDTIENIIHTLDYKR 168 (293)
T ss_dssp C-SSCEEEEECH---HHHSCCCCHHHHHH----HCCEEEEEECCSCHHHHHHHHH
T ss_pred C-CCCEEEEECc---hhhCcCCCHHHHHh----cCCEEEEEeCCCCHHHHHHHHh
Confidence 3 5998853211 11111124444444 2445444444445555555554
No 192
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=65.11 E-value=56 Score=28.70 Aligned_cols=106 Identities=14% Similarity=0.051 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC--------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
.+.+.+..++..+...+.||. |.+|+++ +..++..++ ++.+ .| .+.+.++..-....|.++.+.+
T Consensus 127 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~~~~l~---~~v~--~~-~vg~~~D~~h~~~~g~d~~~~l 199 (294)
T 3vni_A 127 WERSVESVREVAKVAEACGVD-FCLEVLNRFENYLINTAQEGVDFV---KQVD--HN-NVKVMLDTFHMNIEEDSIGGAI 199 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHH---HHHC--CT-TEEEEEEHHHHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEecCcccCcccCCHHHHHHHH---HHcC--CC-CEEEEEEhhhhHHcCCCHHHHH
Confidence 344555555555556668886 6679874 455655544 4444 22 1333333222234677888888
Q ss_pred HHhhcCCCceEEEECCC---Ch----hhHHHHHHHHhhh-cCCcEEEeeCC
Q 019107 235 SIADSCEQVVAVGINCT---SP----RFIHGLILSVRKV-TSKPVIIYPNS 277 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC~---~p----~~~~~~l~~l~~~-~~~pl~vypN~ 277 (346)
+.+.. .+..|=++=. .| -....+++.+++. .+.|+++-+..
T Consensus 200 ~~~~~--~i~~vHl~D~~r~~pG~G~id~~~~~~~L~~~gy~g~~~lE~~~ 248 (294)
T 3vni_A 200 RTAGS--YLGHLHTGECNRKVPGRGRIPWVEIGEALADIGYNGSVVMEPFV 248 (294)
T ss_dssp HHHGG--GEEEEEECCTTSCCTTSSSCCHHHHHHHHHHTTCCSCEEECCCC
T ss_pred HHhhh--hEeEEEeCCCCCCCCCCCCcCHHHHHHHHHHhCCCCcEEEEecc
Confidence 87632 2333333321 11 1245666666654 25677776543
No 193
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=65.11 E-value=53 Score=34.31 Aligned_cols=136 Identities=14% Similarity=0.132 Sum_probs=78.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEE-cc----CCCHHHHHHHHHHHHHhC---CCCcEEEEEEEcCCCcccCCCCHH-H
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAF-ET----IPNKLEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSIL-E 232 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~-ET----~~~~~E~~a~~~a~~~~~---~~~pv~is~~~~~~~~l~~G~~~~-~ 232 (346)
=.+.+.+.|++.++.|.+.|++.|-+ |. ..+.+...++..+.+... .+.++++...+ | ++. +
T Consensus 180 ll~~L~~~y~~~l~~L~~aG~~~VQiDEP~L~~~l~~~~~~~~~~a~~~l~~~~~~~~i~lhtc~--------G-~~~~~ 250 (765)
T 1u1j_A 180 LLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYF--------A-DIPAE 250 (765)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHHHHHHHHHHHHHSTTTTCSSEEEEECCS--------S-CCCHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCCccccCCCHHHHHHHHHHHHHHHhhcCCCeEEEEeCC--------C-CcchH
Confidence 35789999999999999999998743 32 123333344445555541 14566555432 2 223 5
Q ss_pred HHHHhhcCCC-ceEEEECCCC-hhhHHHHHHHHhhhcCCc--EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHH
Q 019107 233 CASIADSCEQ-VVAVGINCTS-PRFIHGLILSVRKVTSKP--VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD 308 (346)
Q Consensus 233 av~~~~~~~~-~~avGvNC~~-p~~~~~~l~~l~~~~~~p--l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (346)
....+.. .+ ++++++-++. ++.+..+.+.+.+ ++- +++-+ + ...|.+ +++...+.+.+..+
T Consensus 251 ~~~~l~~-l~~vd~l~lD~v~~~~~l~~l~~~l~~--~k~L~lGvVd-------g-rni~~~----d~e~v~~~l~~~~~ 315 (765)
T 1u1j_A 251 AYKTLTS-LKGVTAFGFDLVRGTKTLDLVKAGFPE--GKYLFAGVVD-------G-RNIWAN----DFAASLSTLQALEG 315 (765)
T ss_dssp HHHHHTT-CTTCCEEEEESSSCTTHHHHHHHCCCS--SCEEEEEEEC-------S-SSCBCC----CHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCCCcEEEEEecCCcccHHHHHHhcCC--CCEEEEEeeC-------C-cccCCC----CHHHHHHHHHHHHH
Confidence 5666655 46 9999999974 4333222221211 222 22322 1 124654 47777777776654
Q ss_pred -cCCe--EEeecCCCc
Q 019107 309 -AGAS--LFGGCCRTT 321 (346)
Q Consensus 309 -~G~~--ivGGCCGt~ 321 (346)
.|.. +|+=-||..
T Consensus 316 ~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 316 IVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HCCSSCEEEEESSCGG
T ss_pred hcCCCcEEEcCCCCcc
Confidence 3644 889999877
No 194
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=64.97 E-value=41 Score=28.69 Aligned_cols=88 Identities=13% Similarity=0.100 Sum_probs=50.2
Q ss_pred HHHHHHhCCCCEEEEccCC--CH-HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 173 RVLILANSGADLIAFETIP--NK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~--~~-~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
+++.+.+.|+|.+.+-+.. ++ .....+++.+++.-.+.+++++. .++.++.... . .+++.|+++
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~-----------~t~~e~~~~~-~-~G~d~i~~~ 146 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADI-----------ATVEEAKNAA-R-LGFDYIGTT 146 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEEC-----------SSHHHHHHHH-H-TTCSEEECT
T ss_pred HHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecC-----------CCHHHHHHHH-H-cCCCEEEeC
Confidence 4555677899999876542 11 22344566666641147776532 2466665543 3 478899886
Q ss_pred CCC-----h-----hhHHHHHHHHhhhcCCcEEE
Q 019107 250 CTS-----P-----RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~~-----p-----~~~~~~l~~l~~~~~~pl~v 273 (346)
... . ..-...++++.+..+.|+++
T Consensus 147 ~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia 180 (223)
T 1y0e_A 147 LHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA 180 (223)
T ss_dssp TTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE
T ss_pred CCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE
Confidence 421 1 11234566776666777654
No 195
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=64.67 E-value=84 Score=28.61 Aligned_cols=152 Identities=16% Similarity=0.162 Sum_probs=84.3
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~-----~Ls~eEr~~v~~~~~~~~------------------------~g 80 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGES-P-----TLTSEEKVALYRHVVSVV------------------------DK 80 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999996543 333211 1 134455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 81 rvpViaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (301)
T 1xky_A 81 RVPVIAGT-GS------------------NNTHASID----LTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST 137 (301)
T ss_dssp SSCEEEEC-CC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC
T ss_pred CceEEeCC-CC------------------CCHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 33467772 22 13445444 56667779999998754 246777777777766653
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++== +. .++--.-+.+...+.+ +..++.+|=--|.....+..+++.
T Consensus 138 -~lPiilYn-~P--~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~~ 187 (301)
T 1xky_A 138 -PLPVMLYN-VP--GRSIVQISVDTVVRLS-EIENIVAIKDAGGDVLTMTEIIEK 187 (301)
T ss_dssp -SSCEEEEE-CH--HHHSSCCCHHHHHHHH-TSTTEEEEEECSSCHHHHHHHHHH
T ss_pred -CCCEEEEe-Cc--cccCCCCCHHHHHHHH-cCCCEEEEEcCCCCHHHHHHHHHh
Confidence 69998522 11 1211123444444444 334444444444445555555433
No 196
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium}
Probab=64.40 E-value=45 Score=31.31 Aligned_cols=49 Identities=12% Similarity=0.094 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEE
Q 019107 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNS 218 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~ 218 (346)
+.+.++++.|.+.| +|.|=+. ..|++.+++..++.+...| +||||| +.+
T Consensus 201 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~~a~~G--lpi~iTEldv 257 (356)
T 2dep_A 201 DILYELVKNLLEKGVPIDGVGHQTHIDIYNPPVERIIESIKKFAGLG--LDNIITELDM 257 (356)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCccEEEeeeeecCCCCCHHHHHHHHHHHHhCC--CeEEEeecee
Confidence 44667788787766 5888664 3478999999999888766 999998 444
No 197
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=64.27 E-value=4.8 Score=36.43 Aligned_cols=37 Identities=11% Similarity=0.285 Sum_probs=30.4
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
++++++.++|+|.|++|.+|+.++++.+.+.+ +.|+-
T Consensus 172 ~ra~a~~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~n 208 (255)
T 2qiw_A 172 KRIKLMEQAGARSVYPVGLSTAEQVERLVDAV-----SVPVN 208 (255)
T ss_dssp HHHHHHHHHTCSEEEECCCCSHHHHHHHHTTC-----SSCBE
T ss_pred HHHHHHHHcCCcEEEEcCCCCHHHHHHHHHhC-----CCCEE
Confidence 47889999999999999999999988776643 36764
No 198
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=63.97 E-value=84 Score=28.37 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=63.3
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~~-----Ls~eEr~~v~~~~~~~~------------------------~- 66 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGTTGLG-PA-----LSKDEKRQNLNALYDVT------------------------H- 66 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTG-GG-----SCHHHHHHHHHHHTTTC------------------------S-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------C-
Confidence 5678888888889999996543 332211 11 34444445544444221 1
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHh
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~ 206 (346)
. +|+| +|.. +.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+.
T Consensus 67 -g-ViaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (288)
T 2nuw_A 67 -K-LIFQ-VGSL------------------NLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp -C-EEEE-CCCS------------------CHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred -C-eEEe-eCCC------------------CHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 2 6777 2221 3445443 566677899999987542 5677777777666654
Q ss_pred CCCCcEEE
Q 019107 207 GITIPAWF 214 (346)
Q Consensus 207 ~~~~pv~i 214 (346)
. ++|+++
T Consensus 122 ~-~lPiil 128 (288)
T 2nuw_A 122 S-SHSLYI 128 (288)
T ss_dssp C-CSCEEE
T ss_pred c-CCCEEE
Confidence 3 599885
No 199
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=63.73 E-value=26 Score=30.71 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=32.1
Q ss_pred HHHHHHHhCCCCEEEEcc-----CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC
Q 019107 172 RRVLILANSGADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~ 220 (346)
+.++.+.++|+|++-+-- +|++......++.+++.. ++|+-+.|-+.+
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~-~~~~~vhlmv~d 73 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT-KKTLDVHLMIVE 73 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC-CSEEEEEEESSS
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc-CCcEEEEEEccC
Confidence 467778889999874432 355554456667777754 578888886643
No 200
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=63.11 E-value=20 Score=32.82 Aligned_cols=65 Identities=14% Similarity=0.141 Sum_probs=42.9
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
+++...++|+|++++.+| ++++++.+++.++....+.++.+| .|-++..+.+... .+++.|++-.
T Consensus 206 ea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~ieaS----------GGIt~~~i~~~a~--tGVD~isvG~ 270 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLESS----------GGLSLQTAATYAE--TGVDYLAVGA 270 (284)
T ss_dssp HHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEE----------SSCCTTTHHHHHH--TTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEEE----------CCCCHHHHHHHHh--cCCCEEEECH
Confidence 444456689999999997 678888888888764323443332 3555555555543 4788888655
No 201
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=62.59 E-value=27 Score=34.04 Aligned_cols=39 Identities=33% Similarity=0.342 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI-PNKLEAKAYAELLEE 205 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~ 205 (346)
..++..+ |..++.+ |+|+|++|+. ++++|++.+++.++.
T Consensus 269 gld~AI~----Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~ 308 (435)
T 3lg3_A 269 GIEQAIS----RGLAYAP-YADLVWCETSTPDLALAKRFADAVHA 308 (435)
T ss_dssp SHHHHHH----HHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHH----HHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhcc
Confidence 4555543 7778887 9999999996 799999999999986
No 202
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=62.43 E-value=57 Score=30.07 Aligned_cols=84 Identities=18% Similarity=0.104 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
.++++.+.+.|+|++.+= +.+.. .+++.+++.+ .|+++.+ .++.++.... . .++++|.+..
T Consensus 92 ~~~~~~~~~~g~d~V~l~-~g~p~---~~~~~l~~~g--~~v~~~v-----------~s~~~a~~a~-~-~GaD~i~v~g 152 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFG-AGNPT---KYIRELKENG--TKVIPVV-----------ASDSLARMVE-R-AGADAVIAEG 152 (326)
T ss_dssp HHHHHHHHHTTCSEEEEE-SSCCH---HHHHHHHHTT--CEEEEEE-----------SSHHHHHHHH-H-TTCSCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEC-CCCcH---HHHHHHHHcC--CcEEEEc-----------CCHHHHHHHH-H-cCCCEEEEEC
Confidence 456777888999999873 33333 3455666654 8888755 2455554443 3 4678888743
Q ss_pred ---C---ChhhHHHHHHHHhhhcCCcEEE
Q 019107 251 ---T---SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ---~---~p~~~~~~l~~l~~~~~~pl~v 273 (346)
. +...-..+++++.+..+.|+++
T Consensus 153 ~~~GG~~G~~~~~~ll~~i~~~~~iPvia 181 (326)
T 3bo9_A 153 MESGGHIGEVTTFVLVNKVSRSVNIPVIA 181 (326)
T ss_dssp TTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCCCccCCCccHHHHHHHHHHHcCCCEEE
Confidence 1 1112346677776666788765
No 203
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=62.39 E-value=1e+02 Score=29.02 Aligned_cols=139 Identities=20% Similarity=0.175 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEcc----------CCCHHHHHHHHHHHHHh------CCCCcEEEEEEEcCCCcccCCCCHH
Q 019107 168 EFHRRRVLILANSGADLIAFET----------IPNKLEAKAYAELLEEE------GITIPAWFSFNSKDGINVVSGDSIL 231 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~ET----------~~~~~E~~a~~~a~~~~------~~~~pv~is~~~~~~~~l~~G~~~~ 231 (346)
+.|.+.++.+. ..+|+|-+.- +.+.+.+..+++++++. ..++|+++-++..- +.+.+.
T Consensus 164 ~dy~~~~~~~~-~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~-----~~~~~~ 237 (367)
T 3zwt_A 164 EDYAEGVRVLG-PLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDL-----TSQDKE 237 (367)
T ss_dssp HHHHHHHHHHG-GGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCC-----CHHHHH
T ss_pred HHHHHHHHHHh-hhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCC-----CHHHHH
Confidence 34555666665 4689987651 22345566666666542 12589998885321 112355
Q ss_pred HHHHHhhcCCCceEEEE-CCC-C-h--------------------hhHHHHHHHHhhhc--CCcEEEeeCCCCccccccc
Q 019107 232 ECASIADSCEQVVAVGI-NCT-S-P--------------------RFIHGLILSVRKVT--SKPVIIYPNSGETYNAELK 286 (346)
Q Consensus 232 ~av~~~~~~~~~~avGv-NC~-~-p--------------------~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~~~~ 286 (346)
+.++.+.+ .++++|-+ |.+ + + ......+..+++.. +.|++. |.|.
T Consensus 238 ~ia~~~~~-aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~--~GGI------- 307 (367)
T 3zwt_A 238 DIASVVKE-LGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIG--VGGV------- 307 (367)
T ss_dssp HHHHHHHH-HTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE--ESSC-------
T ss_pred HHHHHHHH-cCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEE--ECCC-------
Confidence 66666655 47787654 543 1 1 11235667777766 677654 2331
Q ss_pred cccccCCCChHHHHHHHHHHHHcCCeEEeecCCC---chHHHHHHHHHHc
Q 019107 287 KWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRT---TPNTIKAISRVLS 333 (346)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCGt---~P~hI~al~~~~~ 333 (346)
.++++..+ .+..|+..|.=+-+. +|.-++.|.+.+.
T Consensus 308 -------~s~~da~~----~l~~GAd~V~vgra~l~~gP~~~~~i~~~l~ 346 (367)
T 3zwt_A 308 -------SSGQDALE----KIRAGASLVQLYTALTFWGPPVVGKVKRELE 346 (367)
T ss_dssp -------CSHHHHHH----HHHHTCSEEEESHHHHHHCTHHHHHHHHHHH
T ss_pred -------CCHHHHHH----HHHcCCCEEEECHHHHhcCcHHHHHHHHHHH
Confidence 12343333 445688887765553 5877777766654
No 204
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=62.34 E-value=64 Score=31.66 Aligned_cols=66 Identities=14% Similarity=0.093 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++++.+.++|+|+|.+-+- ++.......++.+++.-.++|+++.. ..+.+++.... + .++++|-+
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~----------v~t~e~a~~l~-~-aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGN----------IATAEAAKALA-E-AGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHH-H-TTCSEEEE
T ss_pred HHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEee----------eCcHHHHHHHH-H-cCCCEEEE
Confidence 45688888999999988643 33344455566666642258998742 23455555444 3 47899888
No 205
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=62.14 E-value=16 Score=32.01 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=52.6
Q ss_pred HHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-----Ccc-----cCCCCHHHHHHHhhcC
Q 019107 173 RVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----INV-----VSGDSILECASIADSC 240 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-----~~l-----~~G~~~~~av~~~~~~ 240 (346)
+++.+.+.|+|.+++-+ +.+...+. ++.+..+ .-.+.+++.+... ..+ .++.+..+.+..+..
T Consensus 89 ~~~~~~~~Gad~V~lg~~~l~~p~~~~---~~~~~~~-~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVNSAAVRRPELIR---ELADHFG-AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE- 163 (252)
T ss_dssp HHHHHHHHTCSEEEECHHHHHCTHHHH---HHHHHHC-GGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHHcCCCEEEEChHHHhCcHHHH---HHHHHcC-CCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH-
Confidence 45555567899999865 33333333 3334433 2235556655321 111 122355566665654
Q ss_pred CCceEEEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 241 EQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 241 ~~~~avGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
.++..+.++....+. -..+++++++..+.|+++
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia 201 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIA 201 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred cCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEE
Confidence 367778776533211 156777887777889765
No 206
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=62.06 E-value=39 Score=31.87 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCCC----HHHH-HHHHHHHHHhCCCCc--EEEEEEEcCCC---------cccC
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIPN----KLEA-KAYAELLEEEGITIP--AWFSFNSKDGI---------NVVS 226 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~----~~E~-~a~~~a~~~~~~~~p--v~is~~~~~~~---------~l~~ 226 (346)
..++...|++-++.|.++|+|+|-+.- |. ..+. ..++++++..-.++| +.+.+ |..+. +..+
T Consensus 166 ~~dlA~a~~~ei~~l~~aG~~~IQiDe-P~l~~~~~~~~~~~v~~~n~~~~~~~~~~~iHi-C~G~~~~~n~d~~~t~~~ 243 (357)
T 3rpd_A 166 AWEFAKILNEEAKELEAAGVDIIQFDE-PAFNVFFDEVNDWGIACLERAIEGLKCETAVHI-CYGYGIKANTDWKKTLGS 243 (357)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC-GGGGTCHHHHHHTHHHHHHHHHTTCCSEEEEEE-CSCCSSHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecC-ccccccHHHHHHHHHHHHHHHHhCCCCceEEEE-ecCCccCCcccccccccc
Confidence 455778899999999999999886542 22 2332 345555555322344 44433 43311 1111
Q ss_pred C-CCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHH
Q 019107 227 G-DSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGK 305 (346)
Q Consensus 227 G-~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (346)
. .++.+++..+.+ .+++++.+-+..+..-..+++.+. ++-+++ |. +|... .+. .++++..+.+++
T Consensus 244 ~~g~y~~i~~~l~~-~~~D~i~lE~~~~r~~~e~l~~~~---~k~v~l----Gv-vd~~s-~~v----e~~eev~~ri~~ 309 (357)
T 3rpd_A 244 EWRQYEEVFPKLQK-SNIDIISLECHNSHVPMELLELIR---GKKVMV----GA-IDVAT-DTI----ETAEEVADTLRK 309 (357)
T ss_dssp CCCGGGGTHHHHHH-SSCCEEEECCTTCCCCGGGGGGGT---TSEEEE----EC-SCTTC-SSC----CCHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHh-CCCCEEEEEecCCCCChHHHHhcC---CCEEEe----cc-ccCcC-CCC----CCHHHHHHHHHH
Confidence 1 134556666655 578999999975321112333332 222111 21 22211 112 357888888877
Q ss_pred HHHc-CCe--EEeecCCCc
Q 019107 306 WRDA-GAS--LFGGCCRTT 321 (346)
Q Consensus 306 ~~~~-G~~--ivGGCCGt~ 321 (346)
..+. |.. ++.=.||-.
T Consensus 310 a~~~v~~~~l~lsPdCGl~ 328 (357)
T 3rpd_A 310 ALKFVDADKLYPCTNCGMT 328 (357)
T ss_dssp HHTTSCGGGEEEECSSCCT
T ss_pred HHHhCCcccEEEeCCCCCC
Confidence 7653 544 899999953
No 207
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=62.00 E-value=1.2e+02 Score=29.35 Aligned_cols=62 Identities=8% Similarity=0.065 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 170 HRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+.+.++.+.+.|+|.|.+- |+ ..+.++..+++.+++. .++.++|.+.++. |..++.++..+.
T Consensus 182 ~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~---~~~~i~~H~Hnd~----GlAvAN~laAv~ 246 (423)
T 3ivs_A 182 LLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGV---VSCDIECHFHNDT----GMAIANAYCALE 246 (423)
T ss_dssp HHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH---CSSEEEEEEBCTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhh---cCCeEEEEECCCC----chHHHHHHHHHH
Confidence 3456677778899988654 43 4777888888888874 3456788888775 555666665554
No 208
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=61.94 E-value=1.1e+02 Score=28.95 Aligned_cols=66 Identities=11% Similarity=0.040 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
+++.+.++.+.+. +|.|.+- |+ ..+.++..+++.+++.- +.++-++|.+.++. |..++.++..++.
T Consensus 145 ~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~~~i~~H~Hnd~----GlAvAN~laAv~a 213 (382)
T 2ztj_A 145 QDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVV-GPRVDIEFHGHNDT----GCAIANAYEAIEA 213 (382)
T ss_dssp HHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHH-TTTSEEEEEEBCTT----SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhc-CCCCeEEEEeCCCc----cHHHHHHHHHHHh
Confidence 3566677778888 9988654 43 37889999999888740 02345788887765 5556666665543
No 209
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=61.58 E-value=72 Score=30.31 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccC---CCH-HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETI---PNK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~---~~~-~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
.+.+.+.+.++- .+.+.+||.+++-.+ .+. .-++.+++++++.+.++|+++.+ .|+...+..+.
T Consensus 293 a~~~~~~~~~~~---il~d~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl---------~G~n~~~g~~~ 360 (388)
T 2nu8_B 293 ATKERVTEAFKI---ILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRL---------EGNNAELGAKK 360 (388)
T ss_dssp CCHHHHHHHHHH---HHTSTTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------ESTTHHHHHHH
T ss_pred CCHHHHHHHHHH---HhcCCCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEe---------CCCCHHHHHHH
Confidence 466666665542 245689999987543 443 34678889999976679999866 57777778777
Q ss_pred hhc
Q 019107 237 ADS 239 (346)
Q Consensus 237 ~~~ 239 (346)
+..
T Consensus 361 l~~ 363 (388)
T 2nu8_B 361 LAD 363 (388)
T ss_dssp HHT
T ss_pred HHH
Confidence 754
No 210
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=61.36 E-value=65 Score=28.76 Aligned_cols=123 Identities=23% Similarity=0.157 Sum_probs=67.8
Q ss_pred HHHHHhCCCCEEEE-ccCC------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHH---HHHHHhhcCCCc
Q 019107 174 VLILANSGADLIAF-ETIP------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSIL---ECASIADSCEQV 243 (346)
Q Consensus 174 i~~l~~~gvD~i~~-ET~~------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~---~av~~~~~~~~~ 243 (346)
++...+.|+|.+-+ +-+. -++|++.+.+++++.+ +|+++.. ..+...+.+-.+.. .+++.... .++
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~--~~vIi~~-~~~G~~~~~~~s~~~i~~a~~~a~~-~GA 173 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFD--LPLVVES-FPRGGKVVNETAPEIVAYAARIALE-LGA 173 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHT--CCEEEEE-CCCSTTCCCTTCHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcC--CeEEEEe-eCCCCccccCCCHHHHHHHHHHHHH-cCC
Confidence 33455578887733 3222 2345666667777765 8988762 22222221111333 33333333 478
Q ss_pred eEEEECCC-ChhhHHHHHHHHhhhcCC-cEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCCC
Q 019107 244 VAVGINCT-SPRFIHGLILSVRKVTSK-PVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRT 320 (346)
Q Consensus 244 ~avGvNC~-~p~~~~~~l~~l~~~~~~-pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCGt 320 (346)
+.|++.-. .++. ++.+.+.... |+.+- .|.. .-+.+++.+.+...++.|+. |=++|.
T Consensus 174 D~vkt~~~~~~e~----~~~~~~~~~~~pV~as--GGi~------------~~~~~~~l~~i~~~~~aGA~--Gvsvgr 232 (263)
T 1w8s_A 174 DAMKIKYTGDPKT----FSWAVKVAGKVPVLMS--GGPK------------TKTEEDFLKQVEGVLEAGAL--GIAVGR 232 (263)
T ss_dssp SEEEEECCSSHHH----HHHHHHHTTTSCEEEE--CCSC------------CSSHHHHHHHHHHHHHTTCC--EEEESH
T ss_pred CEEEEcCCCCHHH----HHHHHHhCCCCeEEEE--eCCC------------CCCHHHHHHHHHHHHHcCCe--EEEEeh
Confidence 88888853 3433 4444444455 85553 2320 01367888888888899997 666663
No 211
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=61.35 E-value=85 Score=27.57 Aligned_cols=90 Identities=9% Similarity=0.006 Sum_probs=49.3
Q ss_pred HHHHHHhCCCCEE-----EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-CcccCCCCHHHH---HHHhhcCCCc
Q 019107 173 RVLILANSGADLI-----AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-INVVSGDSILEC---ASIADSCEQV 243 (346)
Q Consensus 173 ~i~~l~~~gvD~i-----~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-~~l~~G~~~~~a---v~~~~~~~~~ 243 (346)
+++.+.+.|+|++ +++.. +..++...+..+++...++|+++++....+ |.. ++. -.+- ++.+....++
T Consensus 22 ~~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~-~~~-~~~~~~ll~~~~~~~~~ 98 (238)
T 1sfl_A 22 QKINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYG-QFT-NDSYLNLISDLANINGI 98 (238)
T ss_dssp HHHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGGGTSCB-CCC-HHHHHHHHHHGGGCTTC
T ss_pred HHHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccccCCCC-CCC-HHHHHHHHHHHHHhCCC
Confidence 3455566788887 24443 566666666667664325899998875443 332 332 2333 3333222257
Q ss_pred eEEEECCCC--h-hhHHHHHHHHhh
Q 019107 244 VAVGINCTS--P-RFIHGLILSVRK 265 (346)
Q Consensus 244 ~avGvNC~~--p-~~~~~~l~~l~~ 265 (346)
+.|=|--.. + +.+..+++...+
T Consensus 99 d~iDvEl~~~~~~~~~~~l~~~~~~ 123 (238)
T 1sfl_A 99 DMIDIEWQADIDIEKHQRIITHLQQ 123 (238)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEccCCCChHHHHHHHHHHHh
Confidence 787777654 4 455566655443
No 212
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=61.27 E-value=30 Score=37.24 Aligned_cols=67 Identities=15% Similarity=0.138 Sum_probs=43.7
Q ss_pred HHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh----------------hhHHHHHHHHhhh
Q 019107 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP----------------RFIHGLILSVRKV 266 (346)
Q Consensus 203 ~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p----------------~~~~~~l~~l~~~ 266 (346)
+++...+.|+|+++.+..+ -+.+.++++.+.. .++++|-+|+..| +.+..+++.+++.
T Consensus 628 ~~~~~~~~~~i~~i~~g~~-----~~~~~~~a~~~~~-~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~ 701 (1025)
T 1gte_A 628 LKADFPDNIVIASIMCSYN-----KNDWMELSRKAEA-SGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA 701 (1025)
T ss_dssp HHHHCTTSEEEEEECCCSC-----HHHHHHHHHHHHH-TTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEecCCCC-----HHHHHHHHHHHHh-cCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh
Confidence 4443235899998843111 1345566666654 5789999998643 3456678888877
Q ss_pred cCCcEEEee
Q 019107 267 TSKPVIIYP 275 (346)
Q Consensus 267 ~~~pl~vyp 275 (346)
.+.|+++.-
T Consensus 702 ~~~Pv~vK~ 710 (1025)
T 1gte_A 702 VQIPFFAKL 710 (1025)
T ss_dssp CSSCEEEEE
T ss_pred hCCceEEEe
Confidence 789998864
No 213
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=61.00 E-value=97 Score=28.12 Aligned_cols=169 Identities=17% Similarity=0.172 Sum_probs=90.2
Q ss_pred CcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC---CC------HHHHHHHHHHH
Q 019107 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---PN------KLEAKAYAELL 203 (346)
Q Consensus 133 ~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~---~~------~~E~~a~~~a~ 203 (346)
+.+|-|-|=++++...||..| .+.+++.+ +++.+.+.|+|+|=+-.- |. .+|.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~-------~~~~~a~~----~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi 82 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTH-------NSLIDAVK----HANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV 82 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCC-------THHHHHHH----HHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccccc-------CCHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHH
Confidence 467888898888877776433 24555554 566677799999966543 33 77877666555
Q ss_pred HHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC---hhhHHHHHHHHhhhcCCcEEEeeCCCCc
Q 019107 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVIIYPNSGET 280 (346)
Q Consensus 204 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~---p~~~~~~l~~l~~~~~~pl~vypN~g~~ 280 (346)
+.......+.||+.. .. .++++...+. +++ -||=.+ .+.+.+++.+ .+.|+++.++.|..
T Consensus 83 ~~l~~~~~~piSIDT---------~~-~~va~aAl~a-Ga~--iINdvsg~~d~~~~~~~a~----~~~~vVlmh~~G~p 145 (282)
T 1aj0_A 83 EAIAQRFEVWISVDT---------SK-PEVIRESAKV-GAH--IINDIRSLSEPGALEAAAE----TGLPVCLMHMQGNP 145 (282)
T ss_dssp HHHHHHCCCEEEEEC---------CC-HHHHHHHHHT-TCC--EEEETTTTCSTTHHHHHHH----HTCCEEEECCSSCT
T ss_pred HHHHhhcCCeEEEeC---------CC-HHHHHHHHHc-CCC--EEEECCCCCCHHHHHHHHH----hCCeEEEEccCCCC
Confidence 442101134456622 22 2344433232 333 244432 2334444433 37899999987653
Q ss_pred cccccccccccCCCC-----hHHHHHHHHHHHHcCCe---EE---e-ecCCCchHHHHHHHHHHcC
Q 019107 281 YNAELKKWVESTGVR-----DEDFVSYIGKWRDAGAS---LF---G-GCCRTTPNTIKAISRVLSN 334 (346)
Q Consensus 281 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~---iv---G-GCCGt~P~hI~al~~~~~~ 334 (346)
.+- +-.+.. -+ -+.+.+.+....+.|+. |+ | |- +.+.+|--.+-+.++.
T Consensus 146 ~tm---~~~~~y-~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf-~k~~~~n~~ll~~l~~ 206 (282)
T 1aj0_A 146 KTM---QEAPKY-DDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF-GKNLSHNYSLLARLAE 206 (282)
T ss_dssp TCC---SCCCCC-SCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHHHHHHHHHTGGG
T ss_pred ccc---cccCcc-chHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-ccCHHHHHHHHHHHHH
Confidence 111 101110 01 13455566677788986 43 2 22 5567765555455543
No 214
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=61.00 E-value=81 Score=27.52 Aligned_cols=109 Identities=9% Similarity=0.020 Sum_probs=65.2
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++++...+.|+|++..- .. -..++++.++.+ .|+++.+ .++.++..... .+++.|++ .
T Consensus 89 d~~~~A~~aGAd~v~~p---~~--d~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~vk~--F 146 (225)
T 1mxs_A 89 SMFAAVEAAGAQFVVTP---GI--TEDILEAGVDSE--IPLLPGI-----------STPSEIMMGYA--LGYRRFKL--F 146 (225)
T ss_dssp HHHHHHHHHTCSSEECS---SC--CHHHHHHHHHCS--SCEECEE-----------CSHHHHHHHHT--TTCCEEEE--T
T ss_pred HHHHHHHHCCCCEEEeC---CC--CHHHHHHHHHhC--CCEEEee-----------CCHHHHHHHHH--CCCCEEEE--c
Confidence 35666777899999844 22 134556666655 7877652 14567766553 47899999 3
Q ss_pred ChhhH--HHHHHHHhhhc-CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHH-cCCeEEeecCCCchH
Q 019107 252 SPRFI--HGLILSVRKVT-SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD-AGASLFGGCCRTTPN 323 (346)
Q Consensus 252 ~p~~~--~~~l~~l~~~~-~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~ivGGCCGt~P~ 323 (346)
+.+.+ ...|+.++... ..|+ .|-.|. +++ .+.+|++ .|+..+||--=+..+
T Consensus 147 Pa~~~~G~~~lk~i~~~~~~ipv--vaiGGI---------------~~~----N~~~~l~~~Ga~~v~gSai~~~~ 201 (225)
T 1mxs_A 147 PAEISGGVAAIKAFGGPFGDIRF--CPTGGV---------------NPA----NVRNYMALPNVMCVGTTWMLDSS 201 (225)
T ss_dssp THHHHTHHHHHHHHHTTTTTCEE--EEBSSC---------------CTT----THHHHHHSTTBCCEEECTTSCHH
T ss_pred cCccccCHHHHHHHHhhCCCCeE--EEECCC---------------CHH----HHHHHHhccCCEEEEEchhcCch
Confidence 32322 56778777654 4565 344442 222 2345888 688888854434444
No 215
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=60.66 E-value=75 Score=30.92 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=44.4
Q ss_pred HHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++++.+.++|+|.+.+-+. .+.......++.+++.-.++|+++. .+.+.+++.... + .++++|-+.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g----------~~~t~e~a~~l~-~-~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAG----------NVATPEGTEALI-K-AGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEE----------EECSHHHHHHHH-H-TTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeC----------CcCCHHHHHHHH-H-cCCCEEEEc
Confidence 45788899999999988543 3444455566666664225898872 245666665444 3 478888774
Q ss_pred C
Q 019107 250 C 250 (346)
Q Consensus 250 C 250 (346)
.
T Consensus 307 ~ 307 (494)
T 1vrd_A 307 V 307 (494)
T ss_dssp S
T ss_pred C
Confidence 3
No 216
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=60.44 E-value=36 Score=29.51 Aligned_cols=79 Identities=11% Similarity=0.048 Sum_probs=45.7
Q ss_pred HHHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE
Q 019107 172 RRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av 246 (346)
+.++.+.++|+|.|-+-++ +.... ..++.+++.. ++|+++.--+ .++.++-..+ . .++++|
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~--~~i~~i~~~~-~ipv~v~ggi---------~~~~~~~~~l-~-~Gad~V 100 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRGSNH--ELLAEVVGKL-DVQVELSGGI---------RDDESLAAAL-A-TGCARV 100 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSCCCH--HHHHHHHHHC-SSEEEEESSC---------CSHHHHHHHH-H-TTCSEE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCCChH--HHHHHHHHhc-CCcEEEECCC---------CCHHHHHHHH-H-cCCCEE
Confidence 3455777899999987542 22222 3333444432 5999874322 2345544434 3 367888
Q ss_pred EECCC---ChhhHHHHHHHHh
Q 019107 247 GINCT---SPRFIHGLILSVR 264 (346)
Q Consensus 247 GvNC~---~p~~~~~~l~~l~ 264 (346)
.+... .|+.+..+++.+.
T Consensus 101 ~lg~~~l~~p~~~~~~~~~~g 121 (244)
T 2y88_A 101 NVGTAALENPQWCARVIGEHG 121 (244)
T ss_dssp EECHHHHHCHHHHHHHHHHHG
T ss_pred EECchHhhChHHHHHHHHHcC
Confidence 88774 5666777766654
No 217
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=60.39 E-value=16 Score=33.59 Aligned_cols=61 Identities=15% Similarity=0.143 Sum_probs=40.8
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
..++|+|+|++.+| ++++++.+++.++......|+.+|= |-++..+.+.. . .++++|.+-.
T Consensus 209 A~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieASG----------GIt~eni~~~a-~-tGVD~IsvGs 269 (285)
T 1o4u_A 209 AVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEVSG----------GITEENVSLYD-F-ETVDVISSSR 269 (285)
T ss_dssp HHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEEE----------CCCTTTGGGGC-C-TTCCEEEEGG
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEEEC----------CCCHHHHHHHH-H-cCCCEEEEeH
Confidence 34589999999996 7788888888887643346666553 34444444433 3 5788887765
No 218
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=60.32 E-value=54 Score=32.27 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=40.7
Q ss_pred HHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 172 RRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
++++.+.++|+|+|.+-+- ++.......++.+++.-.++|+++.. ..+.+++...++ .++++|-+
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~----------v~t~e~a~~l~~--aGaD~I~V 299 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGN----------VATAEGARALIE--AGVSAVKV 299 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEE----------ECSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcc----------cCcHHHHHHHHH--hCCCEEEE
Confidence 4677888899999998754 23344445566666643368998832 124444444443 37888877
No 219
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.08 E-value=1e+02 Score=28.02 Aligned_cols=151 Identities=17% Similarity=0.116 Sum_probs=84.7
Q ss_pred ChHHHHHHHHHHHHhhcceeecc-ccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|..+ |-+-. . -++.++-.++.+.+++.+ .+
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 72 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEF-A-----YLGTAQREAVVRATIEAA------------------------QR 72 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTG-G-----GCCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc-c-----ccCHHHHHHHHHHHHHHh------------------------CC
Confidence 56788888888899999966543 32211 1 234455556666655543 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |.. +.++..+ +++...+.|+|.+++=+ -++.+++..-.+.+.+..
T Consensus 73 rvpviaGv-g~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~ 129 (300)
T 3eb2_A 73 RVPVVAGV-AST------------------SVADAVA----QAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAV 129 (300)
T ss_dssp SSCBEEEE-EES------------------SHHHHHH----HHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEeC-CCC------------------CHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHC
Confidence 33456772 221 3445544 45566778999998753 246778877777766653
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC--ChhhHHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT--SPRFIHGLILSV 263 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~--~p~~~~~~l~~l 263 (346)
++|+++== +. .++--.-+++ .+..+.+.++ .+||--+ ....+..+++..
T Consensus 130 -~lPiilYn-~P--~~tg~~l~~~-~~~~La~~pn--IvgiKdssgd~~~~~~~~~~~ 180 (300)
T 3eb2_A 130 -EIPVVIYT-NP--QFQRSDLTLD-VIARLAEHPR--IRYIKDASTNTGRLLSIINRC 180 (300)
T ss_dssp -SSCEEEEE-CT--TTCSSCCCHH-HHHHHHTSTT--EEEEEECSSBHHHHHHHHHHH
T ss_pred -CCCEEEEE-Cc--cccCCCCCHH-HHHHHHcCCC--EEEEEcCCCCHHHHHHHHHHc
Confidence 59998533 21 2211223444 3334434344 4555554 445555555543
No 220
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=60.06 E-value=1.2e+02 Score=31.43 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=64.4
Q ss_pred HHHHHHhCCCCEE-EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC---CCcccCCCCHHHHHHHh---hcCCCceE
Q 019107 173 RVLILANSGADLI-AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD---GINVVSGDSILECASIA---DSCEQVVA 245 (346)
Q Consensus 173 ~i~~l~~~gvD~i-~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~---~~~l~~G~~~~~av~~~---~~~~~~~a 245 (346)
-++.+.++|+|.| ++-...+++.++..++.+++.+ +.+...++... +.. +...++..+++.+ .+ .+++.
T Consensus 202 ~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G--~~v~~~i~~~~d~~dp~-r~~~~~e~~~~~a~~l~~-~Ga~~ 277 (718)
T 3bg3_A 202 FCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAG--GVVEAAISYTGDVADPS-RTKYSLQYYMGLAEELVR-AGTHI 277 (718)
T ss_dssp HHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTT--SEEEEEEECCSCTTCTT-CCTTCHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcC--CeEEEEEEeeccccCCC-CCCCCHHHHHHHHHHHHH-cCCCE
Confidence 4556667899987 4456678888888889899877 54444443321 111 1123555444433 33 46777
Q ss_pred EEECCC----ChhhHHHHHHHHhhhc-CCcEEEee
Q 019107 246 VGINCT----SPRFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 246 vGvNC~----~p~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
|.+-=+ .|..+..+++.+++.. +.|+.+..
T Consensus 278 I~l~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~ 312 (718)
T 3bg3_A 278 LCIKDMAGLLKPTACTMLVSSLRDRFPDLPLHIHT 312 (718)
T ss_dssp EEEECTTSCCCHHHHHHHHHHHHHHSTTCCEEEEC
T ss_pred EEEcCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 776543 4999999999998887 67887765
No 221
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=60.01 E-value=1.2e+02 Score=28.71 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=57.4
Q ss_pred HHHHHhCCCCEEEEc-cCCC-------------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH---HHH
Q 019107 174 VLILANSGADLIAFE-TIPN-------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC---ASI 236 (346)
Q Consensus 174 i~~l~~~gvD~i~~E-T~~~-------------~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a---v~~ 236 (346)
++...++|+|.+-+= ..++ ++.++.+++.+++.+ ..+-+.|++.+.. -.++..+ ++.
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g--~~~~v~~~~ed~~----~~~~~~~~~~~~~ 153 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAA--PHVEVRFSAEDTF----RSEEQDLLAVYEA 153 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHC--TTSEEEEEETTTT----TSCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CCEEEEEEEEeCC----CCCHHHHHHHHHH
Confidence 345667899977532 2222 345677778888876 3355666665432 2344444 444
Q ss_pred hhcCCCceEEEEC----CCChhhHHHHHHHHhhh--cCCcEEEee
Q 019107 237 ADSCEQVVAVGIN----CTSPRFIHGLILSVRKV--TSKPVIIYP 275 (346)
Q Consensus 237 ~~~~~~~~avGvN----C~~p~~~~~~l~~l~~~--~~~pl~vyp 275 (346)
+.+ . ++.|.+- +..|..+..+++.+++. .+.|+.+..
T Consensus 154 ~~~-~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~ 196 (382)
T 2ztj_A 154 VAP-Y-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHG 196 (382)
T ss_dssp HGG-G-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHH-h-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence 433 3 5656553 23599999999999887 677888765
No 222
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=59.85 E-value=1e+02 Score=27.90 Aligned_cols=149 Identities=15% Similarity=0.141 Sum_probs=80.7
Q ss_pred ChHHHHHHHHHHHHhhcceeecc-ccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|..+ |-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~-~~-----Lt~~Er~~v~~~~~~~~------------------------~g 70 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAES-PT-----LTTDEKELILKTVIDLV------------------------DK 70 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccccc-cc-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 56778888888899999965433 32211 11 34455556666655533 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 71 rvpviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 127 (292)
T 3daq_A 71 RVPVIAG-TGTN------------------DTEKSIQ----ASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAV 127 (292)
T ss_dssp SSCEEEE-CCCS------------------CHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCcc------------------cHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3456777 3221 3455544 455566689999987642 46677777776665543
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGL 259 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~ 259 (346)
++|+++== + ..++--.-+++...+.. +.+++.+|=--|.....+..+
T Consensus 128 -~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnivgiK~ssgd~~~~~~~ 174 (292)
T 3daq_A 128 -KLPVVLYN-V--PSRTNMTIEPETVEILS-QHPYIVALKDATNDFEYLEEV 174 (292)
T ss_dssp -CSCEEEEE-C--HHHHSCCCCHHHHHHHH-TSTTEEEEEECCCCHHHHHHH
T ss_pred -CCCEEEEe-c--ccccCCCCCHHHHHHHh-cCCCEEEEEeCCCCHHHHHHH
Confidence 59998532 1 11221233445444444 344444433333344444333
No 223
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=59.82 E-value=86 Score=29.41 Aligned_cols=148 Identities=15% Similarity=0.130 Sum_probs=82.9
Q ss_pred CCCHHHHH---HHHHHHHHHHHhCCCCEEEEccC----------C-----------CH----HHHHHHHHHHHH-hCCCC
Q 019107 160 AVSLETLK---EFHRRRVLILANSGADLIAFETI----------P-----------NK----LEAKAYAELLEE-EGITI 210 (346)
Q Consensus 160 ~~~~~e~~---~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~----~E~~a~~~a~~~-~~~~~ 210 (346)
.++.+|+. +.|.+.++.+.++|.|.|=+--- | ++ .-+..+++++++ .+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAE- 228 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCC-
Confidence 36666655 45666666678899999855210 1 11 123345566655 3434
Q ss_pred cEEEEEEEcCC-CcccCCCCHHHHHHH---hhcCCCceEEEECCC----ChhhHHHHHHHHhhhcCCcEEEeeCCCCccc
Q 019107 211 PAWFSFNSKDG-INVVSGDSILECASI---ADSCEQVVAVGINCT----SPRFIHGLILSVRKVTSKPVIIYPNSGETYN 282 (346)
Q Consensus 211 pv~is~~~~~~-~~l~~G~~~~~av~~---~~~~~~~~avGvNC~----~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~ 282 (346)
||.+-++..+. ....+|.++.++++. +.+ .+++.|-+-.. .|..-..+++.+++..+.|+++- .|
T Consensus 229 pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~--Gg---- 301 (365)
T 2gou_A 229 RVGVRLAPLTTLNGTVDADPILTYTAAAALLNK-HRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYA--GR---- 301 (365)
T ss_dssp GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEE--SS----
T ss_pred cEEEEEccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEe--CC----
Confidence 89887776432 112356666665443 444 47888877653 12211356777777778887652 22
Q ss_pred cccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHH
Q 019107 283 AELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISR 330 (346)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~ 330 (346)
+++++. .+.++.| +.+|+=+=+ ..|+-.+.+++
T Consensus 302 -----------i~~~~a----~~~l~~g~aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 302 -----------YNAEKA----EQAINDGLADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp -----------CCHHHH----HHHHHTTSCSEEECCHHHHHCTTHHHHHHH
T ss_pred -----------CCHHHH----HHHHHCCCcceehhcHHHHhCchHHHHHHc
Confidence 123322 3456666 777763322 25777777654
No 224
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=59.65 E-value=3.4 Score=36.62 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=18.0
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC-----Cccc-----CCCCHHHHHHHhhcCCCc
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG-----INVV-----SGDSILECASIADSCEQV 243 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~-----~~l~-----~G~~~~~av~~~~~~~~~ 243 (346)
++.+.+.|+|.+++-|.. +.+-..+.++.+..+ .-.+++++.++.. -.+. ++.+..+.++.+.. .++
T Consensus 94 ~~~~l~~Gad~V~ig~~~-l~dp~~~~~~~~~~g-~~~iv~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~-~G~ 170 (247)
T 3tdn_A 94 FLEAFLRGADKVSINTAA-VENPSLITQIAQTFG-SQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK-RGA 170 (247)
T ss_dssp HHHHHHTTCSEECCSHHH-HHCTHHHHHHHHHHC----------------------------------------------
T ss_pred HHHHHHcCCCeeehhhHH-hhChHHHHHHHHHhC-CCcEEEEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHh-cCC
Confidence 334556899999987631 222222344445554 2345566665431 1111 22334455555544 467
Q ss_pred eEEEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 244 VAVGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 244 ~avGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
..|.++....+. -..+++++++..+.|+++
T Consensus 171 ~~i~~t~~~~~g~~~g~~~~~~~~i~~~~~iPvia 205 (247)
T 3tdn_A 171 GEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 205 (247)
T ss_dssp -----------------------------------
T ss_pred CEEEEecccCCCCcCCCCHHHHHHHHHhCCCCEEE
Confidence 777776643221 124566666656677653
No 225
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.57 E-value=83 Score=31.97 Aligned_cols=112 Identities=14% Similarity=0.101 Sum_probs=67.9
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEc---c-------------------CCCHH-H---HHHHHHHHHH-hCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFE---T-------------------IPNKL-E---AKAYAELLEE-EGIT 209 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~E---T-------------------~~~~~-E---~~a~~~a~~~-~~~~ 209 (346)
.++.+|+ .+.|.+.++...++|.|.+=+= - =.+++ . +..+++++++ .+.+
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~ 224 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGR 224 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4666655 4567777777888999988541 0 11232 2 3344555555 3545
Q ss_pred CcEEEEEEEcCCCcccCCCCHHHHHHHhhcC-CCceEEEECCCC------------hhhHHHHHHHHhhhcCCcEEE
Q 019107 210 IPAWFSFNSKDGINVVSGDSILECASIADSC-EQVVAVGINCTS------------PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 210 ~pv~is~~~~~~~~l~~G~~~~~av~~~~~~-~~~~avGvNC~~------------p~~~~~~l~~l~~~~~~pl~v 273 (346)
.||.+-++..+.. ..|.++.++++.+... .+++++.+...+ +.....+++.+++..+.|+++
T Consensus 225 ~~v~~r~s~~~~~--~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 299 (690)
T 3k30_A 225 AAVACRITVEEEI--DGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVG 299 (690)
T ss_dssp SEEEEEEECCCCS--TTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEE
T ss_pred ceEEEEECccccC--CCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEE
Confidence 7888888765433 4677777765544321 247888887642 112246677777778899776
No 226
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=59.47 E-value=71 Score=30.18 Aligned_cols=66 Identities=11% Similarity=-0.001 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEE-EEEcCCCcccCCCCHHHHHHHhhcCCCceEEE
Q 019107 170 HRRRVLILANSGADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFS-FNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~~~~~l~~G~~~~~av~~~~~~~~~~avG 247 (346)
..++++.+.++|+|+|.+-+ ..+...+...++.+++...++||++- + .+++++....+ .++++|-
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----------~T~e~A~~a~~--aGaD~I~ 167 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNV-----------ATYAGADYLAS--CGADIIK 167 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEE-----------CSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCc-----------CCHHHHHHHHH--cCCCEEE
Confidence 34578889999999998763 33334444456667664225899973 3 24566655544 4778877
Q ss_pred E
Q 019107 248 I 248 (346)
Q Consensus 248 v 248 (346)
|
T Consensus 168 V 168 (361)
T 3r2g_A 168 A 168 (361)
T ss_dssp E
T ss_pred E
Confidence 6
No 227
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=59.19 E-value=43 Score=31.74 Aligned_cols=22 Identities=18% Similarity=0.037 Sum_probs=10.3
Q ss_pred HHHHHHHHhhhcC-CcEEEeeCC
Q 019107 256 IHGLILSVRKVTS-KPVIIYPNS 277 (346)
Q Consensus 256 ~~~~l~~l~~~~~-~pl~vypN~ 277 (346)
+..+++.+++... .|+++.-+.
T Consensus 219 ~~eiv~aVr~avg~~~v~vrls~ 241 (377)
T 2r14_A 219 PLEVVDAVAEVFGPERVGIRLTP 241 (377)
T ss_dssp HHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHcCCCcEEEEecc
Confidence 3444455544432 266665443
No 228
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=59.16 E-value=1e+02 Score=27.65 Aligned_cols=44 Identities=14% Similarity=0.108 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCCEEEEccCC-----------CHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 171 RRRVLILANSGADLIAFETIP-----------NKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~-----------~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.+.++.+.++|+|++.+-++- -.+.++.+.++.++.| +|++.++
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~ 94 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEV 94 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEee
Confidence 346777888999999988763 0677777888888887 9999777
No 229
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=59.03 E-value=1.1e+02 Score=28.26 Aligned_cols=97 Identities=11% Similarity=-0.068 Sum_probs=56.2
Q ss_pred HHHHHHhCCCCEEEEccCC--------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
-++.|.++|++.+-+|-.. ...|...-++++++.....+++|.-..+.. .. ..++++++.+.
T Consensus 121 tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~--a~--~gl~~ai~Ra~ 196 (318)
T 1zlp_A 121 FIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDAR--AP--HGLEEGIRRAN 196 (318)
T ss_dssp HHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTH--HH--HHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHh--hh--cCHHHHHHHHH
Confidence 4556777999999999653 334554455555543222455555543322 11 12456666543
Q ss_pred c--CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 239 ~--~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
. ..|+++|-+-|.. ++.+..+ .+..+.|+++.+-.
T Consensus 197 Ay~eAGAd~i~~e~~~~~e~~~~i----~~~l~~P~lan~~~ 234 (318)
T 1zlp_A 197 LYKEAGADATFVEAPANVDELKEV----SAKTKGLRIANMIE 234 (318)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHH----HHHSCSEEEEEECT
T ss_pred HHHHcCCCEEEEcCCCCHHHHHHH----HHhcCCCEEEEecc
Confidence 2 2589999999974 3544444 44456898775543
No 230
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=58.78 E-value=25 Score=31.47 Aligned_cols=49 Identities=27% Similarity=0.241 Sum_probs=36.1
Q ss_pred HHHHHHHhCCCCEEEE-----ccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC
Q 019107 172 RRVLILANSGADLIAF-----ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~-----ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~ 220 (346)
+.++.+.++|+|++-+ -.+|++..-..+++.+|+...++|+-+.+-+.+
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~ 97 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKP 97 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSS
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCC
Confidence 4677788899998876 345777777778888887643689888887653
No 231
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=58.57 E-value=1.2e+02 Score=28.56 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=41.6
Q ss_pred HHHHHHHHhCCCCEEEEccCC-CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++++.+.++|+|+|.+.+-. +.......++.+++.- +.|+++... .+.+++.... + .++++|.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~-~~~Vivg~v----------~t~e~A~~l~-~-aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM-NIDVIVGNV----------VTEEATKELI-E-NGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC-CCEEEEEEE----------CSHHHHHHHH-H-TTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc-CCcEEEccC----------CCHHHHHHHH-H-cCcCEEEE
Confidence 457888899999999886543 3444455566666643 589987321 2445555444 3 47888877
No 232
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.38 E-value=1.1e+02 Score=27.85 Aligned_cols=152 Identities=14% Similarity=0.001 Sum_probs=83.8
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~eEr~~v~~~~~~~~------------------------~g 79 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEA-F-----VQSLSEREQVLEIVAEEA------------------------KG 79 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999996654 332211 1 134455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 80 rvpViaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (303)
T 2wkj_A 80 KIKLIAH-VGCV------------------STAESQQ----LAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSA 136 (303)
T ss_dssp TSEEEEE-CCCS------------------SHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEe-cCCC------------------CHHHHHH----HHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3456777 3321 3345443 455667789999987542 46777777776665543
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
.++|+++== +. +++--.-+.+...+.+ +.+++.+|=--|.....+..+++
T Consensus 137 ~~lPiilYn-~P--~~tg~~l~~~~~~~La-~~pnIvgiK~s~gd~~~~~~~~~ 186 (303)
T 2wkj_A 137 DGLPMVVYN-IP--ALSGVKLTLDQINTLV-TLPGVGALXQTSGDLYQMEQIRR 186 (303)
T ss_dssp TTCCEEEEE-CH--HHHCCCCCHHHHHHHH-TSTTEEEEEECCCCHHHHHHHHH
T ss_pred CCCCEEEEe-Cc--cccCCCCCHHHHHHHh-cCCCEEEEeCCCCCHHHHHHHHH
Confidence 138988532 11 1111123445444444 33454444444555555555544
No 233
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=57.54 E-value=1.1e+02 Score=27.62 Aligned_cols=151 Identities=17% Similarity=0.089 Sum_probs=82.4
Q ss_pred ChHHHHHHHHHHHH-hhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLD-AGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRIS 130 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~-AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~ 130 (346)
+.+.+++.-+.+++ +|++-|.. -|-+-. . -++.++-.++.+.+++.+ .
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~ 71 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGEN-F-----MLSTEEKKEIFRIAKDEA------------------------K 71 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTG-G-----GSCHHHHHHHHHHHHHHH------------------------T
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccch-h-----hCCHHHHHHHHHHHHHHh------------------------C
Confidence 56778888888899 99996543 333211 1 134455566666665443 1
Q ss_pred CCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHh
Q 019107 131 SRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEE 206 (346)
Q Consensus 131 ~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~ 206 (346)
++-.+|+|. |.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+.
T Consensus 72 grvpviaGv-g~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a 128 (293)
T 1f6k_A 72 DQIALIAQV-GSV------------------NLKEAVE----LGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE 128 (293)
T ss_dssp TSSEEEEEC-CCS------------------CHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEec-CCC------------------CHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 334567772 221 3455543 555667789999987542 4667777766665553
Q ss_pred CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
. ++|+++== + .+++--.-+.+...+.+ +..++.+|=--|.....+..+++
T Consensus 129 ~-~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnIvgiK~s~gd~~~~~~~~~ 178 (293)
T 1f6k_A 129 T-GSNMIVYS-I--PFLTGVNMGIEQFGELY-KNPKVLGVKFTAGDFYLLERLKK 178 (293)
T ss_dssp H-CCCEEEEE-C--HHHHCCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHH
T ss_pred C-CCCEEEEE-C--ccccCcCCCHHHHHHHh-cCCCEEEEEECCCCHHHHHHHHH
Confidence 2 48988532 1 11211123445444444 33444444444444555555543
No 234
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=57.51 E-value=1.1e+02 Score=27.79 Aligned_cols=94 Identities=7% Similarity=-0.034 Sum_probs=61.4
Q ss_pred HHHHHHhCCCCEEEEccCC-------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 173 RVLILANSGADLIAFETIP-------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~-------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
-++.|.++||+.+-+|-.. +.+|...-++++++.+...+++|.-..+. . ...+.++++.+..
T Consensus 102 ~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtda---a--~~gl~~ai~Ra~a 176 (287)
T 3b8i_A 102 TVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNA---E--LIDVDAVIQRTLA 176 (287)
T ss_dssp HHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEET---T--TSCHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechh---h--hcCHHHHHHHHHH
Confidence 3555667999999999764 45577777777777654456666665543 2 2346777765532
Q ss_pred --CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEee
Q 019107 240 --CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 240 --~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
..|+++|-+-|.. ++.+ +.+.+..+.|+++-+
T Consensus 177 y~eAGAd~i~~e~~~~~~~~----~~i~~~~~~P~ii~~ 211 (287)
T 3b8i_A 177 YQEAGADGICLVGVRDFAHL----EAIAEHLHIPLMLVT 211 (287)
T ss_dssp HHHTTCSEEEEECCCSHHHH----HHHHTTCCSCEEEEC
T ss_pred HHHcCCCEEEecCCCCHHHH----HHHHHhCCCCEEEeC
Confidence 2589999999974 4444 444555578987443
No 235
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=57.23 E-value=56 Score=30.42 Aligned_cols=48 Identities=17% Similarity=0.034 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
+.+.++++.|.+.| +|.|=+. ..|+..+++.+++.+...| +||+||=.
T Consensus 187 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~~a~lG--l~v~iTEl 241 (331)
T 3emz_A 187 EKIYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIERYASLD--VQLHVTEL 241 (331)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHHHHTTS--CEEEEEEE
T ss_pred HHHHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHHHHHcC--CcEEEeec
Confidence 34556788888777 6888665 3478899999999998876 99998853
No 236
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=57.10 E-value=1.2e+02 Score=27.79 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhCCCCc
Q 019107 168 EFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEGITIP 211 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~~~~p 211 (346)
+...+.++.+.+.|+|++=++.. .+.++++.+++...... ..|
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~-~~P 223 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHI-NMP 223 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTC-CSC
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccC-CCC
Confidence 34445688888899999988873 57788888888755532 488
No 237
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=56.98 E-value=1.1e+02 Score=27.80 Aligned_cols=84 Identities=11% Similarity=0.049 Sum_probs=51.3
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
.++++.+.+.|+|++.+- +.+. ...++.+++.+ .|++.++ .+..++....+ .++++|.+..
T Consensus 86 ~~~~~~~~~~g~d~V~~~-~g~p---~~~~~~l~~~g--i~vi~~v-----------~t~~~a~~~~~--~GaD~i~v~g 146 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETA-GNDP---GEHIAEFRRHG--VKVIHKC-----------TAVRHALKAER--LGVDAVSIDG 146 (328)
T ss_dssp HHHHHHHHHTTCCEEEEE-ESCC---HHHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--TTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEc-CCCc---HHHHHHHHHcC--CCEEeeC-----------CCHHHHHHHHH--cCCCEEEEEC
Confidence 346777888999999864 2222 23456667654 8888654 14555555443 4678887732
Q ss_pred ---C-C--h--hhHHHHHHHHhhhcCCcEEE
Q 019107 251 ---T-S--P--RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ---~-~--p--~~~~~~l~~l~~~~~~pl~v 273 (346)
. + . .....+++++.+..+.|+++
T Consensus 147 ~~~GG~~G~~~~~~~~~l~~v~~~~~iPvia 177 (328)
T 2gjl_A 147 FECAGHPGEDDIPGLVLLPAAANRLRVPIIA 177 (328)
T ss_dssp TTCSBCCCSSCCCHHHHHHHHHTTCCSCEEE
T ss_pred CCCCcCCCCccccHHHHHHHHHHhcCCCEEE
Confidence 1 1 1 13346777777767788765
No 238
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=56.89 E-value=36 Score=29.94 Aligned_cols=139 Identities=19% Similarity=0.211 Sum_probs=62.9
Q ss_pred HHHHHhCCCCEEEEccCCCHH--HHHHHHHHHHHhCC-CCcEEEEEEEc--CC---CcccCC-----CCHHHHHHHhhcC
Q 019107 174 VLILANSGADLIAFETIPNKL--EAKAYAELLEEEGI-TIPAWFSFNSK--DG---INVVSG-----DSILECASIADSC 240 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~--E~~a~~~a~~~~~~-~~pv~is~~~~--~~---~~l~~G-----~~~~~av~~~~~~ 240 (346)
++.+.+.|+|.+++-+...-. +...+.+++++.+. ..++++++.+. ++ -.+..+ .+..+.+..+..
T Consensus 89 i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~- 167 (266)
T 2w6r_A 89 FLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEK- 167 (266)
T ss_dssp HHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-
T ss_pred HHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHH-
Confidence 334445799999988754311 33333343333320 13466777663 21 112111 356677666655
Q ss_pred CCceEEEECCCChh-----hHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCe--E
Q 019107 241 EQVVAVGINCTSPR-----FIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS--L 313 (346)
Q Consensus 241 ~~~~avGvNC~~p~-----~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--i 313 (346)
.++..|.++-...+ .-..+++++++..+.|+++- .|. .+++++.+.. +.|+. +
T Consensus 168 ~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~~ipvia~--GGI--------------~~~ed~~~~~----~~Gadgv~ 227 (266)
T 2w6r_A 168 RGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS--GGA--------------GKMEHFLEAF----LAGADAAL 227 (266)
T ss_dssp TTCSEEEEEETTTTTTCSCCCHHHHHHHGGGCCSCEEEE--SCC--------------CSHHHHHHHH----HHTCSEEE
T ss_pred cCCCEEEEEeecCCCCcCCCCHHHHHHHHHHcCCCEEEe--CCC--------------CCHHHHHHHH----HcCCHHHH
Confidence 47788887653211 11567788887778897663 332 1245555532 34543 4
Q ss_pred EeecCCCchHHHHHHHHHHc
Q 019107 314 FGGCCRTTPNTIKAISRVLS 333 (346)
Q Consensus 314 vGGCCGt~P~hI~al~~~~~ 333 (346)
||----..|..++++.+.+.
T Consensus 228 vgsal~~~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 228 AASVFHFREIDMRELKEYLK 247 (266)
T ss_dssp ESTTTC--------------
T ss_pred ccHHHHcCCCCHHHHHHHHH
Confidence 55443345656666666554
No 239
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=56.38 E-value=57 Score=29.90 Aligned_cols=72 Identities=17% Similarity=0.131 Sum_probs=39.9
Q ss_pred HHHHHHHhCCCCEEEEccC------------CCHHH----HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHH
Q 019107 172 RRVLILANSGADLIAFETI------------PNKLE----AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~------------~~~~E----~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~ 235 (346)
++++++.+.|+|+|++|-= .++++ +..+++++++.+.+..|+ |. .+-+ .+.+|+-.
T Consensus 174 eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivL----c~-gGpI---stpeDv~~ 245 (286)
T 2p10_A 174 EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIIL----SH-GGPI---ANPEDARF 245 (286)
T ss_dssp HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEE----EE-STTC---CSHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEE----ec-CCCC---CCHHHHHH
Confidence 4566677889999998832 05555 334456666655332222 21 1111 45566666
Q ss_pred HhhcCCCceEEEECCC
Q 019107 236 IADSCEQVVAVGINCT 251 (346)
Q Consensus 236 ~~~~~~~~~avGvNC~ 251 (346)
.++...++++++.-.+
T Consensus 246 ~l~~t~G~~G~~gASs 261 (286)
T 2p10_A 246 ILDSCQGCHGFYGASS 261 (286)
T ss_dssp HHHHCTTCCEEEESHH
T ss_pred HHhcCCCccEEEeehh
Confidence 6654445777776654
No 240
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=56.29 E-value=1.2e+02 Score=27.81 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=34.2
Q ss_pred ChHHHHHHHHHHHHcCCeEEeecCC----CchHHHHHHHHHHcCC
Q 019107 295 RDEDFVSYIGKWRDAGASLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~G~~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
++++..+.+++.++.|--|++--|| |.|++++++-+++++.
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 4788889999999988889986677 5679999999988764
No 241
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=56.21 E-value=46 Score=32.43 Aligned_cols=20 Identities=5% Similarity=-0.072 Sum_probs=14.4
Q ss_pred ChHHHHHHHHHHHHcCCeEE
Q 019107 295 RDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~G~~iv 314 (346)
+.+++.+.++...+.|+..|
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI 328 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGM 328 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 45677788888888886654
No 242
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=56.04 E-value=42 Score=31.27 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=39.3
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
..++|+|+|.+.+| ++++++.+++.++ + +.++.+| .|-++..+.+.+. .+++.|++-.
T Consensus 247 Al~aGaD~I~LDn~-~~~~l~~av~~l~--~-~v~ieaS----------GGIt~~~I~~~a~--tGVD~isvGa 304 (320)
T 3paj_A 247 AISAGADIIMLDNF-SLEMMREAVKINA--G-RAALENS----------GNITLDNLKECAE--TGVDYISVGA 304 (320)
T ss_dssp HHHTTCSEEEEESC-CHHHHHHHHHHHT--T-SSEEEEE----------SSCCHHHHHHHHT--TTCSEEECTH
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhC--C-CCeEEEE----------CCCCHHHHHHHHH--cCCCEEEECc
Confidence 34479999999997 6788888877654 1 3444432 4667776666553 5789888754
No 243
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=55.87 E-value=1.2e+02 Score=27.60 Aligned_cols=151 Identities=12% Similarity=0.013 Sum_probs=82.1
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 82 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEF-PF-----LTSSERLEVVSRVRQAM------------------------PK 82 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTG-GG-----SCHHHHHHHHHHHHHTS------------------------CT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccch-hh-----CCHHHHHHHHHHHHHHc------------------------CC
Confidence 557888888888999999544 3332211 11 34444555555444321 23
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC------CCHHHHHHHHHHHHH
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI------PNKLEAKAYAELLEE 205 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~------~~~~E~~a~~~a~~~ 205 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+
T Consensus 83 r~pviaG-vg~------------------~~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~ 139 (307)
T 3s5o_A 83 NRLLLAG-SGC------------------ESTQATVE----MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVAD 139 (307)
T ss_dssp TSEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHH
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHh
Confidence 4456777 222 13445444 455667789999987542 366777777777766
Q ss_pred hCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHH
Q 019107 206 EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLIL 261 (346)
Q Consensus 206 ~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~ 261 (346)
.. ++|+++== + .+++--.-+++...+.. +..++.+|=--|.....+..+++
T Consensus 140 a~-~lPiilYn-~--P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~ 190 (307)
T 3s5o_A 140 LS-PIPVVLYS-V--PANTGLDLPVDAVVTLS-QHPNIVGMXDSGGDVTRIGLIVH 190 (307)
T ss_dssp HC-SSCEEEEE-C--HHHHSCCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHHH
T ss_pred hc-CCCEEEEe-C--CcccCCCCCHHHHHHHh-cCCCEEEEEcCCCCHHHHHHHHH
Confidence 54 69998432 1 12221223455444444 44444444433334455555544
No 244
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=55.74 E-value=80 Score=27.65 Aligned_cols=88 Identities=10% Similarity=0.050 Sum_probs=52.8
Q ss_pred HHHHHHhCCCCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC--------------cccCCC-CHHH
Q 019107 173 RVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI--------------NVVSGD-SILE 232 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~--------------~l~~G~-~~~~ 232 (346)
.++.+.++|+|++-+- .+|++..-..+++.+++...++|+-+.+-+.+.. +..... .+..
T Consensus 23 ~i~~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~Ad~itvH~ea~~~~~~~ 102 (227)
T 1tqx_A 23 ETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKTSNQLTFHFEALNEDTER 102 (227)
T ss_dssp HHHHHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTTSSEEEEEGGGGTTCHHH
T ss_pred HHHHHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHhCCEEEEeecCCccCHHH
Confidence 5667777898876433 2466766567778888753368998888776632 111222 4666
Q ss_pred HHH---HhhcCCCceEEEECCCCh-hhHHHHH
Q 019107 233 CAS---IADSCEQVVAVGINCTSP-RFIHGLI 260 (346)
Q Consensus 233 av~---~~~~~~~~~avGvNC~~p-~~~~~~l 260 (346)
+++ .+++...-.++-+|...| +.+..++
T Consensus 103 ~i~~~~~i~~~G~k~gvalnp~tp~~~~~~~l 134 (227)
T 1tqx_A 103 CIQLAKEIRDNNLWCGISIKPKTDVQKLVPIL 134 (227)
T ss_dssp HHHHHHHHHTTTCEEEEEECTTSCGGGGHHHH
T ss_pred HHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHh
Confidence 777 665532234566666543 4444443
No 245
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=55.69 E-value=40 Score=30.41 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=28.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE--ccCC
Q 019107 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAF--ETIP 191 (346)
Q Consensus 156 ~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~--ET~~ 191 (346)
+|+. -+.+++.++-.+.++.|.+.|+|+|++ -|.+
T Consensus 43 PYG~-ks~~~i~~~~~~~~~~L~~~g~~~IVIACNTa~ 79 (269)
T 3ist_A 43 PYGP-RDKEEVAKFTWEMTNFLVDRGIKMLVIACNTAT 79 (269)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCCcc
Confidence 3443 488999999999999999999999986 4554
No 246
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=55.27 E-value=1.3e+02 Score=27.78 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEE-EccCC---CHHH--------HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 166 LKEFHRRRVLILANSGADLIA-FETIP---NKLE--------AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 166 ~~~~~~~~i~~l~~~gvD~i~-~ET~~---~~~E--------~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
+.+...+-++.+.++|+|.|. +++.. +.++ .+.+++.+++.+ .|++ -|.+. +. ..
T Consensus 191 i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g--~~~i-~~~~G-~~---------~~ 257 (359)
T 2inf_A 191 LADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKEN--VPLI-MFGVG-AS---------HL 257 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGC--SCEE-EECTT-CG---------GG
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcC--CcEE-EEcCC-cH---------HH
Confidence 344455566677789999774 55432 3332 223344454433 6765 44331 11 13
Q ss_pred HHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcC---
Q 019107 234 ASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAG--- 310 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--- 310 (346)
+..+.. .+++++++--..+ +..+++. ..-+.+.-|- |+. ... -++++..+.+++.++.|
T Consensus 258 l~~l~~-~g~d~~~~d~~~d------~~~~~~~-g~~~~l~Gnl----dp~---~l~---~t~e~I~~~v~~~l~~~~~~ 319 (359)
T 2inf_A 258 AGDWHD-LPLDVVGLDWRLG------IDEARSK-GITKTVQGNL----DPS---ILL---APWEVIEQKTKEILDQGMES 319 (359)
T ss_dssp HHHHHT-SSCSEEECCTTSC------HHHHHHT-TCCSEEECCB----CGG---GGG---SCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHH-hCCCEEEeCCCCC------HHHHHHc-CCCEEEEecC----ChH---Hhc---CCHHHHHHHHHHHHHhCCCC
Confidence 334434 4788888764321 2222222 2223444332 111 111 25788888888887543
Q ss_pred -CeEEeecCC----CchHHHHHHHHHHcCC
Q 019107 311 -ASLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 311 -~~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
--|++--|| |.|++|+++.+.++..
T Consensus 320 ~g~Il~~gcgi~~~~~~enl~a~ve~v~~~ 349 (359)
T 2inf_A 320 DGFIFNLGHGVFPDVSPEVLKKLTAFVHEY 349 (359)
T ss_dssp SCEEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCCCCCCcCHHHHHHHHHHHHHh
Confidence 257777777 5679999999887654
No 247
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=55.17 E-value=1e+02 Score=28.47 Aligned_cols=164 Identities=16% Similarity=0.131 Sum_probs=93.0
Q ss_pred cCCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRI 129 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~ 129 (346)
++.+-|.++.+-+.--+.++-||. |.++....-.|. +... .+++.+++ +
T Consensus 23 Nv~n~e~~~Ail~AAee~~sPvIl----q~s~g~~~y~g~------~~~~---~~v~~~a~-~----------------- 71 (305)
T 1rvg_A 23 NVNNMEFLQAVLEAAEEQRSPVIL----ALSEGAMKYGGR------ALTL---MAVELAKE-A----------------- 71 (305)
T ss_dssp ECCSHHHHHHHHHHHHHTTCCEEE----EEEHHHHHHHHH------HHHH---HHHHHHHH-C-----------------
T ss_pred eeCCHHHHHHHHHHHHHhCCCEEE----ECChhHHhhCCH------HHHH---HHHHHHHh-C-----------------
Confidence 478899999999999999999887 333333221121 1222 22222222 1
Q ss_pred CCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc--CC---CHHHHHHHHHHHH
Q 019107 130 SSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET--IP---NKLEAKAYAELLE 204 (346)
Q Consensus 130 ~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET--~~---~~~E~~a~~~a~~ 204 (346)
+.|+.+-..=|. +++.+ ....++|..-+++-- .| |+...+.+++.+.
T Consensus 72 -~VPValHlDHg~-------------------~~e~~--------~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah 123 (305)
T 1rvg_A 72 -RVPVAVHLDHGS-------------------SYESV--------LRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAH 123 (305)
T ss_dssp -SSCEEEEEEEEC-------------------SHHHH--------HHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEECCCCC-------------------CHHHH--------HHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHH
Confidence 235544443322 34333 334468888888762 22 3445566667777
Q ss_pred HhCCCCcEEEEEEEcCCCcccCC----------CCHHHHHHHhhcCCCceEEEECCC--C--------hhhHHHHHHHHh
Q 019107 205 EEGITIPAWFSFNSKDGINVVSG----------DSILECASIADSCEQVVAVGINCT--S--------PRFIHGLILSVR 264 (346)
Q Consensus 205 ~~~~~~pv~is~~~~~~~~l~~G----------~~~~~av~~~~~~~~~~avGvNC~--~--------p~~~~~~l~~l~ 264 (346)
+.+ ++|---+-.-+-..|| ++++++.+.++. ++++++=+.-. | |..-...|++++
T Consensus 124 ~~g----vsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~ 198 (305)
T 1rvg_A 124 AVG----VTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMER-TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIA 198 (305)
T ss_dssp HTT----CEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHH
T ss_pred HcC----CEEEEEEeeccCccCCccccccccccCCHHHHHHHHHH-HCCCEEEEecCccccccCCCCCCccCHHHHHHHH
Confidence 665 4444333211111111 788999998865 47776655542 2 233467888888
Q ss_pred hhcCCcEEEeeCC
Q 019107 265 KVTSKPVIIYPNS 277 (346)
Q Consensus 265 ~~~~~pl~vypN~ 277 (346)
+..+.||++.--+
T Consensus 199 ~~~~vpLVlHGgS 211 (305)
T 1rvg_A 199 RLVPAPLVLHGAS 211 (305)
T ss_dssp HHCCSCEEECSCC
T ss_pred HhcCCCEEEeCCC
Confidence 8888999886444
No 248
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=55.13 E-value=79 Score=29.49 Aligned_cols=86 Identities=14% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
+.++++.+.+.|+|++.+ .+... ...+++.+++.+ +|+|+++ .++.++....+ .++++|.+.
T Consensus 111 ~~~~~~~~~~~g~~~V~~-~~g~~--~~~~i~~~~~~g--~~v~~~v-----------~t~~~a~~a~~--~GaD~i~v~ 172 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSF-HFGVP--DREVIARLRRAG--TLTLVTA-----------TTPEEARAVEA--AGADAVIAQ 172 (369)
T ss_dssp HHHHHHHHHHSCCSEEEE-ESSCC--CHHHHHHHHHTT--CEEEEEE-----------SSHHHHHHHHH--TTCSEEEEE
T ss_pred HHHHHHHHHhcCCCEEEE-eCCCC--cHHHHHHHHHCC--CeEEEEC-----------CCHHHHHHHHH--cCCCEEEEe
Q ss_pred CCCh-----------------hhHHHHHHHHhhhcCCcEEE
Q 019107 250 CTSP-----------------RFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~~p-----------------~~~~~~l~~l~~~~~~pl~v 273 (346)
.... .....+++++++..+.|+++
T Consensus 173 g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPVia 213 (369)
T 3bw2_A 173 GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVA 213 (369)
T ss_dssp CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEE
T ss_pred CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEE
No 249
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=54.98 E-value=1.4e+02 Score=29.24 Aligned_cols=90 Identities=13% Similarity=0.200 Sum_probs=51.9
Q ss_pred HHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEE-EEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWF-SFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~i-s~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++++.+.++|+|++.+-+- .+......+++.+++.-.+.|+++ ++ .+.+++....+ .++++|-+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~~~v-----------~t~~~a~~l~~--aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNV-----------VTAAQAKNLID--AGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEEEEE-----------CSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEeccc-----------chHHHHHHHHH--cCCCEEEE
Confidence 45677788899999987433 333444455666666422588886 22 34455554443 36788755
Q ss_pred C------CC-------C--hhhHHHHHHHHhhhcCCcEEE
Q 019107 249 N------CT-------S--PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 249 N------C~-------~--p~~~~~~l~~l~~~~~~pl~v 273 (346)
. |+ + .......+.++.+..+.|+++
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 2 11 1 122334556666656788765
No 250
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=54.34 E-value=48 Score=31.29 Aligned_cols=71 Identities=10% Similarity=0.026 Sum_probs=34.8
Q ss_pred hHHHHHHHHhhhcC-CcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE---eecCCCchHHHHHHHH
Q 019107 255 FIHGLILSVRKVTS-KPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF---GGCCRTTPNTIKAISR 330 (346)
Q Consensus 255 ~~~~~l~~l~~~~~-~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv---GGCCGt~P~hI~al~~ 330 (346)
.+..+++.+++... .|+++.-+....+++.. . ..+.+++.+.++.+.+.|+.+| +|. .+++.++.+++
T Consensus 205 f~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~----~--~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~ 276 (362)
T 4ab4_A 205 LLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG----D--ADRAETFTYVARELGKRGIAFICSRERE--ADDSIGPLIKE 276 (362)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC----C--TTHHHHHHHHHHHHHHTTCSEEEEECCC--CTTCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEeeccccccccC----C--CCcHHHHHHHHHHHHHhCCCEEEECCCC--CCHHHHHHHHH
Confidence 34555666665542 27777766542211100 0 0112446666666666775543 332 23345666666
Q ss_pred HHc
Q 019107 331 VLS 333 (346)
Q Consensus 331 ~~~ 333 (346)
.++
T Consensus 277 ~~~ 279 (362)
T 4ab4_A 277 AFG 279 (362)
T ss_dssp HHC
T ss_pred HCC
Confidence 553
No 251
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=54.14 E-value=1.1e+02 Score=28.68 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=58.1
Q ss_pred HHHHH-hCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 174 VLILA-NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 174 i~~l~-~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
+.++. ..|+.++. ...+.++....++.+++.+ .+|+.+.+.+.+ .+.++.+.+ .+++.|-||+.+
T Consensus 62 A~avA~~GGlgii~--~~~s~e~~~~~I~~vk~~~-~~pvga~ig~~~----------~e~a~~l~e-aGad~I~ld~a~ 127 (361)
T 3khj_A 62 AVGMARLGGIGIIH--KNMDMESQVNEVLKVKNSG-GLRVGAAIGVNE----------IERAKLLVE-AGVDVIVLDSAH 127 (361)
T ss_dssp HHHHHHTTCEEEEC--SSSCHHHHHHHHHHHHHTT-CCCCEEEECTTC----------HHHHHHHHH-TTCSEEEECCSC
T ss_pred HHHHHHcCCCeEEe--cCCCHHHHHHHHHHHHhcc-CceEEEEeCCCH----------HHHHHHHHH-cCcCeEEEeCCC
Confidence 33343 45666654 4567888888888788765 689988884421 445554444 478999999874
Q ss_pred --hhhHHHHHHHHhhhcCCcEEE
Q 019107 253 --PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 253 --p~~~~~~l~~l~~~~~~pl~v 273 (346)
+..+...++.+++..+.|+++
T Consensus 128 G~~~~~~~~i~~i~~~~~~~Viv 150 (361)
T 3khj_A 128 GHSLNIIRTLKEIKSKMNIDVIV 150 (361)
T ss_dssp CSBHHHHHHHHHHHHHCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhcCCcEEE
Confidence 666777788877766778776
No 252
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=54.10 E-value=84 Score=27.55 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=32.7
Q ss_pred HHHHHHHhCCCCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC
Q 019107 172 RRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKD 220 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~ 220 (346)
+.++.+ ++|+|++-+- .+|++.....+++.+|+.. ++|+-+.+-+.+
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~-~~~~dvhLmv~d 68 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA-TKPLDCHLMVTR 68 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC-CSCEEEEEESSC
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc-CCcEEEEEEecC
Confidence 356667 7898876433 3466666667888888764 689888887654
No 253
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=54.02 E-value=71 Score=29.39 Aligned_cols=85 Identities=20% Similarity=0.144 Sum_probs=51.9
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
+.+.++.+.+.|+|++.+-. ....| +++.+++.+ .|+++.+ .++.++.. +.+ .++++|.+.
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~-g~p~~---~i~~l~~~g--~~v~~~v-----------~~~~~a~~-~~~-~GaD~i~v~ 137 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGA-GNPSK---YMERFHEAG--IIVIPVV-----------PSVALAKR-MEK-IGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECS-SCGGG---THHHHHHTT--CEEEEEE-----------SSHHHHHH-HHH-TTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECC-CChHH---HHHHHHHcC--CeEEEEe-----------CCHHHHHH-HHH-cCCCEEEEE
Confidence 34567778889999998643 23333 455566654 8998765 24554443 333 367777773
Q ss_pred CC------ChhhHHHHHHHHhhhcCCcEEE
Q 019107 250 CT------SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 250 C~------~p~~~~~~l~~l~~~~~~pl~v 273 (346)
.. +......+++++.+..+.|+++
T Consensus 138 g~~~GG~~g~~~~~~ll~~i~~~~~iPVia 167 (332)
T 2z6i_A 138 GMEAGGHIGKLTTMTLVRQVATAISIPVIA 167 (332)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCCCCCCCCCccHHHHHHHHHHhcCCCEEE
Confidence 31 1122346777777777889765
No 254
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=53.88 E-value=26 Score=30.56 Aligned_cols=102 Identities=18% Similarity=0.223 Sum_probs=59.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHH----HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKL----EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~----E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
++.+++.+.|++ ....+.|++++|+-+.+. +.....+.++..+ .||++-..... .++.+++..
T Consensus 94 i~~~~i~~~~~~----~l~~~~D~vlIEgaggl~~p~~~~~~~adla~~l~--~pviLV~~~~~-------~~i~~~~~~ 160 (228)
T 3of5_A 94 ISIENLKQFIED----KYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQ--IPVLLVSAIKV-------GCINHTLLT 160 (228)
T ss_dssp CCHHHHHHHHHG----GGGSSCSEEEEEEEEETTCBSSSSCBHHHHHHHHT--CCEEEEEECST-------THHHHHHHH
T ss_pred CCHHHHHHHHHH----HHHccCCEEEEECCCccccccccchhHHHHHHHcC--CCEEEEEcCCc-------chHHHHHHH
Confidence 466677665543 123678999999864221 2223456667665 89987664421 124444332
Q ss_pred ---hhc-CCCceEEEECCCChh--hHHHHHHHHhhhcCCc-EEEee
Q 019107 237 ---ADS-CEQVVAVGINCTSPR--FIHGLILSVRKVTSKP-VIIYP 275 (346)
Q Consensus 237 ---~~~-~~~~~avGvNC~~p~--~~~~~l~~l~~~~~~p-l~vyp 275 (346)
+.. ...+.++-+|...++ .....++.+++....| +++-|
T Consensus 161 ~~~l~~~~~~i~GvIlN~~~~~~~~~~~~~~~l~~~~g~pvLG~iP 206 (228)
T 3of5_A 161 INELNRHNIKLAGWIANCNDSNIKYIDEQINTIEELSGYKCSAKIS 206 (228)
T ss_dssp HHHHHHTTCCEEEEEEEECCTTCSCHHHHHHHHHHHHSCCCSEEEE
T ss_pred HHHHHhCCCcEEEEEEECcCCcchhhHHHHHHHHHhhCCCEEEECC
Confidence 222 234678889998653 3445566776666777 46667
No 255
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=53.84 E-value=99 Score=28.99 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=10.9
Q ss_pred HHHHHhhcCCCceEEEECCCC
Q 019107 232 ECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 232 ~av~~~~~~~~~~avGvNC~~ 252 (346)
++++.+.+ .+.++|=|||.+
T Consensus 165 ~aA~~a~~-aGfDgVeih~a~ 184 (365)
T 2gou_A 165 QAALNAME-AGFDGIELHAAN 184 (365)
T ss_dssp HHHHHHHH-TTCSEEEEECCT
T ss_pred HHHHHHHH-cCCCEEEEeccc
Confidence 34433333 467777777753
No 256
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=53.83 E-value=1.1e+02 Score=26.58 Aligned_cols=83 Identities=16% Similarity=0.181 Sum_probs=51.1
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++++...+.|+|++..-. .+ ..+++.+++.+ .|+++-+ .++.++..... .+++.|++ .
T Consensus 80 d~~~~A~~aGAd~v~~p~-~d----~~v~~~ar~~g--~~~i~Gv-----------~t~~e~~~A~~--~Gad~vk~--F 137 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPG-LN----PKIVKLCQDLN--FPITPGV-----------NNPMAIEIALE--MGISAVKF--F 137 (224)
T ss_dssp HHHHHHHHHTCSEEECSS-CC----HHHHHHHHHTT--CCEECEE-----------CSHHHHHHHHH--TTCCEEEE--T
T ss_pred HHHHHHHHCCCCEEEECC-CC----HHHHHHHHHhC--CCEEecc-----------CCHHHHHHHHH--CCCCEEEE--e
Confidence 456677788999997542 22 33455667755 7887641 14677766553 47899999 3
Q ss_pred Chhh--HHHHHHHHhhhc-CCcEEEeeCCC
Q 019107 252 SPRF--IHGLILSVRKVT-SKPVIIYPNSG 278 (346)
Q Consensus 252 ~p~~--~~~~l~~l~~~~-~~pl~vypN~g 278 (346)
+... -...|+.++... ..|+ .|-.|
T Consensus 138 pa~~~gG~~~lk~l~~~~~~ipv--vaiGG 165 (224)
T 1vhc_A 138 PAEASGGVKMIKALLGPYAQLQI--MPTGG 165 (224)
T ss_dssp TTTTTTHHHHHHHHHTTTTTCEE--EEBSS
T ss_pred eCccccCHHHHHHHHhhCCCCeE--EEECC
Confidence 2122 267778887655 4665 34444
No 257
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=53.79 E-value=32 Score=31.17 Aligned_cols=58 Identities=22% Similarity=0.226 Sum_probs=37.1
Q ss_pred hCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
++|+|+|.+-|+ ++++++.+++.++....+.|+.+| .|-++..+.+.+. .++++||+-
T Consensus 200 ~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~As----------GGI~~~ni~~~~~--aGaD~i~vG 257 (273)
T 2b7n_A 200 NAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEAS----------GNISLESINAYAK--SGVDAISVG 257 (273)
T ss_dssp HHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEE----------SSCCTTTHHHHHT--TTCSEEECT
T ss_pred HcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEE----------CCCCHHHHHHHHH--cCCcEEEEc
Confidence 468999999986 578888777777653223555543 3445555555543 467888773
No 258
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=53.78 E-value=1.3e+02 Score=27.23 Aligned_cols=154 Identities=12% Similarity=-0.003 Sum_probs=84.1
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 71 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEG-C-----SVGSRERQAILSSFIAAG------------------------IA 71 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHTT------------------------CC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999996553 333211 1 134455556665555432 22
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC-----CCHHHHHHHHHHHHHh
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI-----PNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-----~~~~E~~a~~~a~~~~ 206 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+.
T Consensus 72 r~pviaG-vg~~------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 72 PSRIVTG-VLVD------------------SIEDAAD----QSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp GGGEEEE-ECCS------------------SHHHHHH----HHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEe-CCCc------------------cHHHHHH----HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 3346777 3321 3345443 566677799999987642 4667777776665553
Q ss_pred CC--CCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCC-ceEEEECCCChhhHHHHHHH
Q 019107 207 GI--TIPAWFSFNSKDGINVVSGDSILECASIADSCEQ-VVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 207 ~~--~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~-~~avGvNC~~p~~~~~~l~~ 262 (346)
.. ++|+++== +. .++--.-+.+...+.+++..+ +.+|=--|.....+..+++.
T Consensus 129 ~p~~~lPiilYn-~P--~~tg~~l~~~~~~~La~~~pn~ivgiKds~gd~~~~~~~~~~ 184 (294)
T 3b4u_A 129 IGKDARDILVYN-IP--SVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHTERLLKE 184 (294)
T ss_dssp HCTTCCCEEEEE-CH--HHHSCCCCHHHHHHHHHHCTTTEEEEEECCCCHHHHHHHHHH
T ss_pred cCCCCCcEEEEE-Cc--chhCcCCCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHh
Confidence 11 48988532 11 111112344444444423344 55544444455666665544
No 259
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=53.65 E-value=24 Score=27.10 Aligned_cols=112 Identities=11% Similarity=0.093 Sum_probs=57.2
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC---cccCCCCHH--HHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 188 ETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI---NVVSGDSIL--ECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 188 ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~---~l~~G~~~~--~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++..+..+...++..++..+ +|++|-|.-.-.+ .+.. .+. +...... ..+..+.|||...+.-..+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~--k~vlv~f~a~wC~~C~~~~~--~l~~~~~~~~~~--~~~~~~~vd~~~~~~~~~l~~~ 83 (133)
T 3fk8_A 10 EHADAWTQVKKALAAGKRTH--KPTLLVFGANWCTDCRALDK--SLRNQKNTALIA--KHFEVVKIDVGNFDRNLELSQA 83 (133)
T ss_dssp TTCCHHHHHHHHHHHHHHHT--CCEEEEEECTTCHHHHHHHH--HHTSHHHHHHHH--HHCEEEEEECTTTTSSHHHHHH
T ss_pred cccChHhHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHH--HhCCHHHHHHhc--CCEEEEEEeCCcccchHHHHHH
Confidence 44556677777777776655 8999999744332 1111 122 3333332 2478899999543333445555
Q ss_pred Hhhh---cCCcE-EEe-eCCCCccccccccccccCCCChHHHHHHHHHH
Q 019107 263 VRKV---TSKPV-IIY-PNSGETYNAELKKWVESTGVRDEDFVSYIGKW 306 (346)
Q Consensus 263 l~~~---~~~pl-~vy-pN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (346)
+. . ...|. +++ +|+-.++......+......+.+++.++++++
T Consensus 84 ~~-v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 84 YG-DPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TT-CGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred hC-CccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 43 3 46784 455 44432221111111111124456666665554
No 260
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=53.30 E-value=64 Score=29.22 Aligned_cols=64 Identities=19% Similarity=0.104 Sum_probs=45.9
Q ss_pred HHHHHHhCCCCEEEEc-cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
|+......|+|.+++- +.-+..+++.+++.+++.| +-+++.+. +.+++...+ . .+++.||+|=.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh-----------~~eEl~~A~-~-~ga~iIGinnr 198 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH-----------DEAEMERAL-K-LSSRLLGVNNR 198 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC-----------SHHHHHHHT-T-SCCSEEEEECB
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHH-h-cCCCEEEECCC
Confidence 4556677999998776 3556678888899888876 76666552 456665544 3 47899999953
No 261
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=53.12 E-value=28 Score=32.23 Aligned_cols=58 Identities=17% Similarity=0.259 Sum_probs=38.9
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
.+++|+|+|++.+| ++++++.+++.++. . +.+..+ .|-++..+.+..+ .+++.|++-.
T Consensus 223 Al~aGaDiImLDn~-s~~~l~~av~~~~~---~--v~leaS--------GGIt~~~i~~~A~--tGVD~IsvGa 280 (300)
T 3l0g_A 223 SLSNNVDMILLDNM-SISEIKKAVDIVNG---K--SVLEVS--------GCVNIRNVRNIAL--TGVDYISIGC 280 (300)
T ss_dssp HHHTTCSEEEEESC-CHHHHHHHHHHHTT---S--SEEEEE--------SSCCTTTHHHHHT--TTCSEEECGG
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHhhcC---c--eEEEEE--------CCCCHHHHHHHHH--cCCCEEEeCc
Confidence 44589999999997 66888888876652 2 333331 3556666665553 5889988866
No 262
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=53.04 E-value=91 Score=27.01 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=50.5
Q ss_pred CCceEEE--ECCC-----ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeE
Q 019107 241 EQVVAVG--INCT-----SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASL 313 (346)
Q Consensus 241 ~~~~avG--vNC~-----~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~i 313 (346)
.+++.|- +|.+ .++.+...++.+++... |+.+.--. . +.. +++++..+.++...+.|+.+
T Consensus 82 ~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~----e--~~~------l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 82 DGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIV----E--TPY------LNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEEC----C--GGG------CCHHHHHHHHHHHHHHTCSE
T ss_pred cCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEE----e--CCC------CCHHHHHHHHHHHHHhCCCE
Confidence 3667776 6764 35556666777776655 65543200 0 011 34667888888888899888
Q ss_pred Eeec-----CCCchHHHHHHHHHHc
Q 019107 314 FGGC-----CRTTPNTIKAISRVLS 333 (346)
Q Consensus 314 vGGC-----CGt~P~hI~al~~~~~ 333 (346)
|=-. .|.+.+.++.+++.+.
T Consensus 149 I~tstg~~~gga~~~~i~~v~~~v~ 173 (225)
T 1mzh_A 149 IKTSTGFAPRGTTLEEVRLIKSSAK 173 (225)
T ss_dssp EECCCSCSSSCCCHHHHHHHHHHHT
T ss_pred EEECCCCCCCCCCHHHHHHHHHHhC
Confidence 8311 2347799999998874
No 263
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=52.35 E-value=86 Score=27.89 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=55.9
Q ss_pred HHHHHHHHhCCCCEEEEccCCC----------------------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCC
Q 019107 171 RRRVLILANSGADLIAFETIPN----------------------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD 228 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~----------------------~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~ 228 (346)
.+.++.|.++|+|+|-+-.-.+ +.....+++.+++...++|+.+ +... +.-...|
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~l-m~y~-n~v~~~g- 110 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGL-LMYA-NLVFNNG- 110 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEE-EECH-HHHHTTC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEE-EEcc-cHHHHhh-
Confidence 3467888999999998876221 2223345666777633689775 3211 1111122
Q ss_pred CHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhh
Q 019107 229 SILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKV 266 (346)
Q Consensus 229 ~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~ 266 (346)
+...++.+.. .+++++-+....++.+..+++.++++
T Consensus 111 -~~~~~~~~~~-aGadgii~~d~~~e~~~~~~~~~~~~ 146 (268)
T 1qop_A 111 -IDAFYARCEQ-VGVDSVLVADVPVEESAPFRQAALRH 146 (268)
T ss_dssp -HHHHHHHHHH-HTCCEEEETTCCGGGCHHHHHHHHHT
T ss_pred -HHHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 3556665544 37888888887777777777777665
No 264
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=52.10 E-value=40 Score=30.43 Aligned_cols=90 Identities=18% Similarity=0.275 Sum_probs=50.0
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE-EECC-
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV-GINC- 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av-GvNC- 250 (346)
-++.+.++|+|.+++=.+|. +|....++++++.+ ++.+. + +. +.++.+.+........+...+ .+.-
T Consensus 111 f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~g--l~~i~-l-ia------p~s~~eri~~ia~~~~gfiy~vs~~G~ 179 (271)
T 1ujp_A 111 FFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIG--LETVF-L-LA------PTSTDARIATVVRHATGFVYAVSVTGV 179 (271)
T ss_dssp HHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHT--CEEEC-E-EC------TTCCHHHHHHHHTTCCSCEEEECC---
T ss_pred HHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcC--CceEE-E-eC------CCCCHHHHHHHHHhCCCCEEEEecCcc
Confidence 35557778999777655554 77888888899877 54332 2 11 223444333333333343322 1111
Q ss_pred CC-----hhhHHHHHHHHhhhcCCcEEE
Q 019107 251 TS-----PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ~~-----p~~~~~~l~~l~~~~~~pl~v 273 (346)
++ +.....+++++++.++.|+++
T Consensus 180 TG~~~~~~~~~~~~v~~vr~~~~~Pv~v 207 (271)
T 1ujp_A 180 TGMRERLPEEVKDLVRRIKARTALPVAV 207 (271)
T ss_dssp ---------CCHHHHHHHHTTCCSCEEE
T ss_pred cCCCCCCCccHHHHHHHHHhhcCCCEEE
Confidence 11 234467888888888888765
No 265
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=52.08 E-value=17 Score=32.99 Aligned_cols=40 Identities=30% Similarity=0.373 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
+--.++++++.++|+|.|++|-+|. ++++.+. ++. +.|++
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it---~~l--~iP~i 200 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVPV-ELAKRIT---EAL--AIPVI 200 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHH---HHC--SSCEE
T ss_pred HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHH---HhC--CCCEE
Confidence 4455688999999999999999984 4444333 332 37865
No 266
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=52.06 E-value=66 Score=29.29 Aligned_cols=129 Identities=18% Similarity=0.198 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc-----ccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGIN-----VVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~-----l~~G~~~~~a 233 (346)
+....+.++ ++ ....-||++=|- |..-..+++..++.+++.+ +++. + .++ +..| .+.+.
T Consensus 50 lg~~~~~Dl----Le-~ag~yID~lKfg~GTs~l~~~l~ekI~l~~~~g--V~v~--~----GGTlfE~~l~qg-~~~~y 115 (276)
T 1u83_A 50 YPLQFFKDA----IA-GASDYIDFVKFGWGTSLLTKDLEEKISTLKEHD--ITFF--F----GGTLFEKYVSQK-KVNEF 115 (276)
T ss_dssp CCHHHHHHH----HH-HHGGGCCEEEECTTGGGGCTTHHHHHHHHHHTT--CEEE--E----CHHHHHHHHHTT-CHHHH
T ss_pred CCHHHHHHH----HH-HhhhhcceEEecCcchhhhHHHHHHHHHHHHcC--CeEe--C----CcHHHHHHHHcC-cHHHH
Confidence 455555553 23 334679999655 3332234788888899877 5544 3 221 2233 67777
Q ss_pred HHHhhcCCCceEEEECCCC----hhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHc
Q 019107 234 ASIADSCEQVVAVGINCTS----PRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDA 309 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~----p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (346)
++.++. .+.++|=|+-.. .+....+++..+ +. +.|.+..|.. ++ ......+|+.|.+.+++++++
T Consensus 116 l~~~k~-lGF~~IEISdGti~l~~~~~~~lI~~a~---~~-f~Vl~EvG~K-~~-----~~~~~~~~~~~I~~~~~dLeA 184 (276)
T 1u83_A 116 HRYCTY-FGCEYIEISNGTLPMTNKEKAAYIADFS---DE-FLVLSEVGSK-DA-----ELASRQSSEEWLEYIVEDMEA 184 (276)
T ss_dssp HHHHHH-TTCSEEEECCSSSCCCHHHHHHHHHHHT---TT-SEEEEECSCC-C-----------CCSTHHHHHHHHHHHH
T ss_pred HHHHHH-cCCCEEEECCCcccCCHHHHHHHHHHHH---hh-cEEeeecccc-Cc-----cccCCCCHHHHHHHHHHHHHC
Confidence 777766 589999998853 355555666543 34 6777777742 11 112236789999999999999
Q ss_pred CCeEE
Q 019107 310 GASLF 314 (346)
Q Consensus 310 G~~iv 314 (346)
||..|
T Consensus 185 GA~~V 189 (276)
T 1u83_A 185 GAEKV 189 (276)
T ss_dssp TEEEE
T ss_pred CCcEE
Confidence 98765
No 267
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=51.94 E-value=37 Score=31.24 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=38.4
Q ss_pred HhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.+.|+|+|.+.|+ ++++++.+++.++....+.|+.+| .|-++..+...+. .++++||+-
T Consensus 214 ~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~AS----------GGIt~~ni~~~~~--aGaD~i~vG 272 (299)
T 2jbm_A 214 AEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEAS----------GGITLDNLPQFCG--PHIDVISMG 272 (299)
T ss_dssp HHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEE----------SSCCTTTHHHHCC--TTCCEEECT
T ss_pred HHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEE----------CCCCHHHHHHHHH--CCCCEEEEC
Confidence 3479999999996 588888888777653224565544 3444455555443 478888873
No 268
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=51.90 E-value=1.4e+02 Score=27.32 Aligned_cols=41 Identities=7% Similarity=0.063 Sum_probs=32.0
Q ss_pred ChHHHHHHHHHHHHc-CC---eEEeecCC----CchHHHHHHHHHHcCC
Q 019107 295 RDEDFVSYIGKWRDA-GA---SLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~-G~---~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
++++..+.+++.++. |. -|++--|| |.|++++++.+.++..
T Consensus 300 t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~env~a~v~~v~~~ 348 (354)
T 3cyv_A 300 PPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRL 348 (354)
T ss_dssp CHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 578899999988865 54 57777777 4789999999887754
No 269
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=51.84 E-value=1.4e+02 Score=29.90 Aligned_cols=65 Identities=26% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHHHhCCCCEEEEcc---------------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh
Q 019107 173 RVLILANSGADLIAFET---------------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET---------------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~ 237 (346)
+++.|.++|+|.+-+-. +|-+.-+..+.+++++.+ .|||. |.+- ....+++..+
T Consensus 335 ~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~--vpvIA-----DGGI----~~sGDi~KAl 403 (556)
T 4af0_A 335 QAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFG--IPCIA-----DGGI----GNIGHIAKAL 403 (556)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGT--CCEEE-----ESCC----CSHHHHHHHH
T ss_pred HHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcC--CCEEe-----cCCc----CcchHHHHHh
Confidence 45568889999996432 344444444445556655 88882 2221 2335677766
Q ss_pred hcCCCceEEEECC
Q 019107 238 DSCEQVVAVGINC 250 (346)
Q Consensus 238 ~~~~~~~avGvNC 250 (346)
. .++++|++--
T Consensus 404 a--aGAd~VMlGs 414 (556)
T 4af0_A 404 A--LGASAVMMGG 414 (556)
T ss_dssp H--TTCSEEEEST
T ss_pred h--cCCCEEEEch
Confidence 4 3678887754
No 270
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=51.69 E-value=1.1e+02 Score=27.85 Aligned_cols=95 Identities=4% Similarity=-0.050 Sum_probs=58.1
Q ss_pred HHHHHhCCCCEEEEcc-CCC--------------HHHHHHHHHHHHHhCCCCcEEEEEE----EcCCCcccCCCCHHHHH
Q 019107 174 VLILANSGADLIAFET-IPN--------------KLEAKAYAELLEEEGITIPAWFSFN----SKDGINVVSGDSILECA 234 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~~--------------~~E~~a~~~a~~~~~~~~pv~is~~----~~~~~~l~~G~~~~~av 234 (346)
++...++|+|.+-+-. .++ ++.++.+++.+++.+ +.|-+.+. +++.++ .++..++
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G--~~v~~~i~~~~~~~~~~~----~~~~~~~ 160 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN--LTTRAYLSTVFGCPYEKD----VPIEQVI 160 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECTTCBTTTBC----CCHHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEEEEEEecCCcCCC----CCHHHHH
Confidence 4556667999886532 221 345677788888877 55554443 233332 3444444
Q ss_pred H---HhhcCCCceEEEECC----CChhhHHHHHHHHhhhc-CCcEEEee
Q 019107 235 S---IADSCEQVVAVGINC----TSPRFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 235 ~---~~~~~~~~~avGvNC----~~p~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
+ .+.+ .+++.|.+-= ..|..+..+++.+++.. +.|+.+..
T Consensus 161 ~~~~~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 161 RLSEALFE-FGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHF 208 (307)
T ss_dssp HHHHHHHH-HTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEEC
T ss_pred HHHHHHHh-cCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 4 3333 3666665542 35999999999998876 47888775
No 271
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A
Probab=51.45 E-value=73 Score=31.79 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
+.+.++++.|.+.| +|.|=+. ..|++.+++.+++.+.+.| +||+|| +.+.
T Consensus 360 ~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p~~~~i~~~L~~~a~lG--lpI~ITElDv~ 417 (530)
T 1us2_A 360 TKMVDMVKDFQARSIPIDGVGFQMHVCMNYPSIANISAAMKKVVDLG--LLVKITELDVA 417 (530)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceeEEEEeeecCCCCCCHHHHHHHHHHHHhcC--CeEEEEeCccC
Confidence 34556787787777 5998654 3578999999999888876 999999 4443
No 272
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=51.43 E-value=1.5e+02 Score=27.46 Aligned_cols=154 Identities=16% Similarity=0.132 Sum_probs=86.5
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++++.+++.+ .+
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~eEr~~vi~~~ve~~------------------------~g 99 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEF-S-----QLGAEERKAIARFAIDHV------------------------DR 99 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999995543 332211 1 134455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 100 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 156 (343)
T 2v9d_A 100 RVPVLIG-TGG------------------TNARETIE----LSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSV 156 (343)
T ss_dssp SSCEEEE-CCS------------------SCHHHHHH----HHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTC
T ss_pred CCcEEEe-cCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3346777 222 13455544 455667789999987542 47778777777766643
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l 263 (346)
++|+++==.. ..+--.-+.+...+.+++..++.+|=--|.....+..+++..
T Consensus 157 -~lPiilYn~P---~~tg~~l~~e~~~~La~~~pnIvgiKdssgd~~~~~~l~~~~ 208 (343)
T 2v9d_A 157 -TLPVMLYNFP---ALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTV 208 (343)
T ss_dssp -SSCEEEEECH---HHHSSCCCHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHH
T ss_pred -CCCEEEEeCc---hhcCcCCCHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHHhc
Confidence 6998853211 111112344444444424345444444444556666666544
No 273
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=51.43 E-value=69 Score=31.29 Aligned_cols=86 Identities=20% Similarity=0.329 Sum_probs=51.3
Q ss_pred HHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHH-H
Q 019107 230 ILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWR-D 308 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 308 (346)
+.+.+...++..+.....|||.+++.+..+++...+ .+.|+++....+++-.. ..+ .+.+|++|..+++... +
T Consensus 8 mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee-~~sPVIIe~t~~qv~~~--gGY---tG~~p~~f~~~V~~~A~~ 81 (450)
T 3txv_A 8 LIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHR-EKAPVLIEATCNQVNQD--GGY---TGMTPEDFTRFVGAIADR 81 (450)
T ss_dssp -------------CCEEEECCCCHHHHHHHHHHHHH-SCSCEEEEEETTTSCTT--CTT---TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHH-hCCCEEEEcChhhHhhc--CCC---CCCCHHHHHHHHHHHHHH
Confidence 455555554433466788899999999999988765 46898877655443100 011 1256889999998876 4
Q ss_pred cCCe----EEeecCCCc
Q 019107 309 AGAS----LFGGCCRTT 321 (346)
Q Consensus 309 ~G~~----ivGGCCGt~ 321 (346)
.|+. +++|-=|.+
T Consensus 82 ~~vPv~pV~LhlDHg~~ 98 (450)
T 3txv_A 82 IEFPREKILLGGDHLGP 98 (450)
T ss_dssp TTCCGGGEEEEEEEESS
T ss_pred cCcCcccEEEECCCCCC
Confidence 6877 899877754
No 274
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=51.16 E-value=1.5e+02 Score=27.14 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=78.2
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 75 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAES-PT-----LTHDEELELFAAVQKVV------------------------NG 75 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTG-GG-----SCHHHHHHHHHHHHHHS------------------------CS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 456788888888999999544 3343321 11 34455555655555432 23
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC-CEEEEcc----CCCHHHHHHHHHHHHHh
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGA-DLIAFET----IPNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gv-D~i~~ET----~~~~~E~~a~~~a~~~~ 206 (346)
+-.+|+| +|.. +.++..+ +++...+.|+ |.+++=+ -|+.+++..-.+.+.+.
T Consensus 76 rvpViaG-vg~~------------------~t~~ai~----la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 76 RVPLIAG-VGTN------------------DTRDSIE----FVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA 132 (311)
T ss_dssp SSCEEEE-CCCS------------------SHHHHHH----HHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS
T ss_pred CCcEEEe-CCCc------------------CHHHHHH----HHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 3456777 3321 3445443 5566677786 9998764 24677877777777665
Q ss_pred CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
. ++|+++==.. +++--.-+.+...+.. +.+ -.+|+--++
T Consensus 133 ~-~lPiilYn~P---~~tg~~l~~~~~~~La-~~p--nIvgiKdss 171 (311)
T 3h5d_A 133 S-DLPIIIYNIP---GRVVVELTPETMLRLA-DHP--NIIGVKECT 171 (311)
T ss_dssp C-SSCEEEEECH---HHHSSCCCHHHHHHHH-TST--TEEEEEECS
T ss_pred C-CCCEEEEecc---cccCCCCCHHHHHHHh-cCC--CEEEEEeCC
Confidence 4 6999853211 1211223444444443 333 456666655
No 275
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=51.13 E-value=1.5e+02 Score=27.12 Aligned_cols=157 Identities=12% Similarity=0.111 Sum_probs=83.7
Q ss_pred CCChHHHHHHHHHHHHh----hcceeecccccc-CHHhHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019107 51 VSSPHLVRKVHLDYLDA----GANIIITASYQA-TIQGFE-AKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFT 124 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~A----GA~iI~TnTy~a-s~~~l~-~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~ 124 (346)
+++++.+.++=+...++ |..+|..+.|.= ++-... ..|+. ...++++.+++++++
T Consensus 27 ie~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg-------~~~GL~~L~~~~~e~------------ 87 (288)
T 3tml_A 27 VESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLG-------MDEGLRILSEVKRQL------------ 87 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------C-------HHHHHHHHHHHHHHH------------
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcC-------HHHHHHHHHHHHHhc------------
Confidence 68898888877777766 666776666642 322221 12333 134566677776543
Q ss_pred CCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC--CCHHHHHHHHHH
Q 019107 125 GSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI--PNKLEAKAYAEL 202 (346)
Q Consensus 125 ~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a 202 (346)
.+.++-++ + +. ++++.+.+- ||++-+-.+ .+.. .++.
T Consensus 88 --------Glp~~tev----------------~----d~--------~~v~~l~~~-vd~lkIgA~~~~n~~----LLr~ 126 (288)
T 3tml_A 88 --------GLPVLTDV----------------H----SI--------DEIEQVASV-VDVLQTPAFLCRQTD----FIHA 126 (288)
T ss_dssp --------CCCEEEEC----------------C----SG--------GGHHHHHHH-CSEEEECGGGTTCHH----HHHH
T ss_pred --------CCeEEEEe----------------C----CH--------HHHHHHHHh-CCEEEECcccccCHH----HHHH
Confidence 12222211 1 11 123334444 899987653 3333 2444
Q ss_pred HHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCC------ceEEEECCCC---hhh---HHHHHHHHhhhcCCc
Q 019107 203 LEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQ------VVAVGINCTS---PRF---IHGLILSVRKVTSKP 270 (346)
Q Consensus 203 ~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~------~~avGvNC~~---p~~---~~~~l~~l~~~~~~p 270 (346)
+.++ ++||.++- +.-.+=+.+..+++.+..... -..+..-|+. ++. =...+..+++ +..|
T Consensus 127 ~a~~--gkPVilK~-----G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~i~~lk~-~~~p 198 (288)
T 3tml_A 127 CARS--GKPVNIKK-----GQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRSLAIMRE-TNAP 198 (288)
T ss_dssp HHTS--SSCEEEEC-----CTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHHHHHGGG-GSSC
T ss_pred HHcc--CCcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHHHHHHHh-cCCc
Confidence 5554 49999764 221233456778887754211 3577888863 333 2556777877 7889
Q ss_pred EEEee
Q 019107 271 VIIYP 275 (346)
Q Consensus 271 l~vyp 275 (346)
+++.|
T Consensus 199 V~~D~ 203 (288)
T 3tml_A 199 VVFDA 203 (288)
T ss_dssp EEEEH
T ss_pred EEEcC
Confidence 98865
No 276
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=51.09 E-value=1.2e+02 Score=26.20 Aligned_cols=98 Identities=14% Similarity=-0.011 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 170 HRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
|.+.++...+. +|++=+|-.. ......+.+.++..+ ..+++|+.-. ..+++-+.+.+.+..+.. .+. .+=+-
T Consensus 73 ~~~ll~~~~~~-~d~iDvEl~~-~~~~~~l~~~~~~~g--~kvI~S~Hdf--~~tp~~~el~~~~~~~~~-~ga-ivKia 144 (219)
T 2egz_A 73 REELFEELSPL-SDYTDIELSS-RGLLVKLYNITKEAG--KKLIISYHNF--ELTPPNWIIREVLREGYR-YGG-IPKIA 144 (219)
T ss_dssp HHHHHHHHTTT-SSEEEEETTC-HHHHHHHHHHHHHTT--CEEEEEEEES--SCCCCHHHHHHHHHHHHH-TTS-EEEEE
T ss_pred HHHHHHHHHhc-CCEEEEEccC-CccHHHHHHHHHHcC--CEEEEEecCC--CCCcCHHHHHHHHHHHHH-cCC-EEEEE
Confidence 33344455556 9999999654 322455667677655 7799998632 222233334444555444 344 44444
Q ss_pred C--CChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 250 C--TSPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 250 C--~~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
+ .+++....+++..... +.|++++.-
T Consensus 145 ~~a~~~~D~l~ll~~~~~~-~~P~I~~~M 172 (219)
T 2egz_A 145 VKANSYEDVARLLCISRQV-EGEKILISM 172 (219)
T ss_dssp EECSSHHHHHHHHHHHTTS-CSCBEEEEE
T ss_pred EccCCHHHHHHHHHHHHhC-CCCEEEEEC
Confidence 4 3567777777765543 789887753
No 277
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=50.98 E-value=56 Score=31.11 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=44.5
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC---------C--cccCCCCHHHHHHH---hhcCCC
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDG---------I--NVVSGDSILECASI---ADSCEQ 242 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~---------~--~l~~G~~~~~av~~---~~~~~~ 242 (346)
+.+.+++.+ ++.+..|++.+.+++++.+...+|++-+....+ + ..+-|-+..++.+. +....+
T Consensus 120 a~~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tg~~~sRfG~~~~e~~~l~~~~~~~~~ 196 (425)
T 2qgh_A 120 ALKLNILFL---NVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAF 196 (425)
T ss_dssp HHHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGGBCCSTTSSSSBCHHHHHHHHHHHHHCSS
T ss_pred HHHCCCCEE---EeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCcccccCCCCCCCcCCHHHHHHHHHHHHhCCC
Confidence 344677755 566788888888877776644566666654211 1 34577777665544 334446
Q ss_pred ceEEEECCC
Q 019107 243 VVAVGINCT 251 (346)
Q Consensus 243 ~~avGvNC~ 251 (346)
+...|+-|.
T Consensus 197 l~l~Gl~~H 205 (425)
T 2qgh_A 197 LEPVSVHFH 205 (425)
T ss_dssp EEEEEEECC
T ss_pred ccEEEEEEE
Confidence 767777764
No 278
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=50.90 E-value=1.5e+02 Score=27.23 Aligned_cols=94 Identities=7% Similarity=0.016 Sum_probs=61.4
Q ss_pred HHHHHHhCCCCEEEEccCC--------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 173 RVLILANSGADLIAFETIP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
-++.+.++|++.+-+|-.. +.+|...-++++++.+ .+++|.-..+.. . ...++++++.+.
T Consensus 109 ~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I~ARtda~--~--~~g~~~ai~Ra~ 182 (305)
T 3ih1_A 109 TAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVARTDAR--G--VEGLDEAIERAN 182 (305)
T ss_dssp HHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEEEECCH--H--HHCHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEEEEeeccc--c--ccCHHHHHHHHH
Confidence 4777888999999999753 3457777777777765 677766654332 1 123677777653
Q ss_pred c--CCCceEEEECCCC-hhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 239 S--CEQVVAVGINCTS-PRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 239 ~--~~~~~avGvNC~~-p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
. ..|+++|-+-|.. ++.+..+ .+..+.|+++-+-
T Consensus 183 ay~eAGAD~i~~e~~~~~~~~~~i----~~~~~~P~~~n~~ 219 (305)
T 3ih1_A 183 AYVKAGADAIFPEALQSEEEFRLF----NSKVNAPLLANMT 219 (305)
T ss_dssp HHHHHTCSEEEETTCCSHHHHHHH----HHHSCSCBEEECC
T ss_pred HHHHcCCCEEEEcCCCCHHHHHHH----HHHcCCCEEEeec
Confidence 2 2478999999974 4544444 4445689876543
No 279
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=50.58 E-value=79 Score=29.78 Aligned_cols=71 Identities=6% Similarity=-0.033 Sum_probs=36.9
Q ss_pred hHHHHHHHHhhhcC-CcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE---eecCCCchHHHHHHHH
Q 019107 255 FIHGLILSVRKVTS-KPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF---GGCCRTTPNTIKAISR 330 (346)
Q Consensus 255 ~~~~~l~~l~~~~~-~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv---GGCCGt~P~hI~al~~ 330 (346)
.+..+++.+++... .|+++.-+....+++ +.. ..+.+++.+.++.+.+.|+.+| +|. .+++.++.+++
T Consensus 213 f~~evv~aVr~~vg~~~v~vRls~~~~~~g----~~~--~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~~~~~~ik~ 284 (361)
T 3gka_A 213 LLLEVVDAAIDVWSAARVGVHLAPRGDAHT----MGD--SDPAATFGHVARELGRRRIAFLFARESF--GGDAIGQQLKA 284 (361)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEECTTCCSSS----CCC--SCHHHHHHHHHHHHHHTTCSEEEEECCC--STTCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEecccccccCC----CCC--CCcHHHHHHHHHHHHHcCCCEEEECCCC--CCHHHHHHHHH
Confidence 44566666666542 288887665321111 000 0113456667777777776554 332 23455666666
Q ss_pred HHc
Q 019107 331 VLS 333 (346)
Q Consensus 331 ~~~ 333 (346)
.++
T Consensus 285 ~~~ 287 (361)
T 3gka_A 285 AFG 287 (361)
T ss_dssp HHC
T ss_pred HcC
Confidence 654
No 280
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=50.28 E-value=44 Score=30.81 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 169 FHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 169 ~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
.+.++++.|.+.| +|.|=+. ..+++.+++..++.+.+.+ +||||| +.+.
T Consensus 184 ~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pv~iTEldi~ 240 (313)
T 1v0l_A 184 AMYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAITELDIQ 240 (313)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEET
T ss_pred HHHHHHHHHHHCCCCcceEEEeEEccCCCCCHHHHHHHHHHHHhcC--CeEEEEeCCcc
Confidence 3446777777767 5998664 2355678888888888766 999998 4454
No 281
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=50.17 E-value=33 Score=31.53 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=38.0
Q ss_pred HHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
...++|+|+|.+.+| ++++++.+++.++. +.++.+| .|-++..+.+... .+++.|++-.
T Consensus 213 eAl~aGaD~I~LDn~-~~~~l~~av~~~~~---~v~ieaS----------GGIt~~~i~~~a~--tGVD~IsvGa 271 (287)
T 3tqv_A 213 QAIAAKADIVMLDNF-SGEDIDIAVSIARG---KVALEVS----------GNIDRNSIVAIAK--TGVDFISVGA 271 (287)
T ss_dssp HHHHTTCSEEEEESC-CHHHHHHHHHHHTT---TCEEEEE----------SSCCTTTHHHHHT--TTCSEEECSH
T ss_pred HHHHcCCCEEEEcCC-CHHHHHHHHHhhcC---CceEEEE----------CCCCHHHHHHHHH--cCCCEEEECh
Confidence 344589999999997 56788877776552 2333332 3455555555543 5788888743
No 282
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=50.01 E-value=20 Score=32.17 Aligned_cols=73 Identities=12% Similarity=0.043 Sum_probs=44.3
Q ss_pred HHHHHhCCCCEEEEccCC--CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 174 VLILANSGADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~--~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++.+.+.|+|.+.+..+. +.+-++ ++.++. ..|+++- .+ .+ +. ++-+.+ .+++-|-+|+.
T Consensus 44 A~~~~~~Ga~~l~vvDL~~~n~~~i~---~i~~~~--~~pv~vg-----GG-ir---~~-~~~~~l---~Ga~~Viigs~ 105 (260)
T 2agk_A 44 AKLYKDRDVQGCHVIKLGPNNDDAAR---EALQES--PQFLQVG-----GG-IN---DT-NCLEWL---KWASKVIVTSW 105 (260)
T ss_dssp HHHHHHTTCTTCEEEEESSSCHHHHH---HHHHHS--TTTSEEE-----SS-CC---TT-THHHHT---TTCSCEEECGG
T ss_pred HHHHHHcCCCEEEEEeCCCCCHHHHH---HHHhcC--CceEEEe-----CC-CC---HH-HHHHHh---cCCCEEEECcH
Confidence 444556789988886555 554433 333443 4888851 11 11 12 444444 36777778885
Q ss_pred ---C-----hhhHHHHHHHHh
Q 019107 252 ---S-----PRFIHGLILSVR 264 (346)
Q Consensus 252 ---~-----p~~~~~~l~~l~ 264 (346)
. |+.+..+++.+.
T Consensus 106 a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 106 LFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp GBCTTCCBCHHHHHHHHHHHC
T ss_pred HHhhcCCCCHHHHHHHHHHhC
Confidence 5 888888888875
No 283
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=49.84 E-value=1.6e+02 Score=27.14 Aligned_cols=92 Identities=12% Similarity=-0.015 Sum_probs=60.0
Q ss_pred HHHHHHhCCCCEEEEccCC--------------CHHH----HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 173 RVLILANSGADLIAFETIP--------------NKLE----AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~--------------~~~E----~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
-++.+.++|++.+-+|-.. +.+| +++++++.++.+ .+++|.-..+. .. ...+++++
T Consensus 108 ~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTDa--~~--~~gldeAi 181 (307)
T 3lye_A 108 TVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLR--SDFVLIARTDA--LQ--SLGYEECI 181 (307)
T ss_dssp HHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTT--CCCEEEEEECC--HH--HHCHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCeEEEEechh--hh--ccCHHHHH
Confidence 4777888999999999653 3445 444444444334 67777765543 22 23478888
Q ss_pred HHhhc--CCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEE
Q 019107 235 SIADS--CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 235 ~~~~~--~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~v 273 (346)
+.+.. ..++++|-+-|. .++.+..+.+.+. .+|+.+
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~---~~Pv~~ 220 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGFRSKEQAAAAVAALA---PWPLLL 220 (307)
T ss_dssp HHHHHHHHTTCSEEEECCCSCHHHHHHHHHHHT---TSCBEE
T ss_pred HHHHHHHHCCCCEEEecCCCCHHHHHHHHHHcc---CCceeE
Confidence 87643 258899999997 5677777766663 367643
No 284
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=49.76 E-value=15 Score=33.59 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
+--.++++++.++|+|.|++|-+|. ++++.+. ++. +.|++
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it---~~l--~iP~i 200 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVLA-ELAKKVT---ETV--SCPTI 200 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCH-HHHHHHH---HHC--SSCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHH---HhC--CCCEE
Confidence 3444588899999999999999984 4444333 333 37865
No 285
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=49.57 E-value=1.5e+02 Score=26.89 Aligned_cols=150 Identities=15% Similarity=0.111 Sum_probs=85.0
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~-~-----~Lt~~Er~~v~~~~~~~~------------------------~g 83 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGES-P-----TTTDGEKIELLRAVLEAV------------------------GD 83 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 567888888889999999554 3343321 1 134455556666555443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 84 rvpviaG-vg~~------------------~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 84 RARVIAG-AGTY------------------DTAHSIR----LAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADAT 140 (304)
T ss_dssp TSEEEEE-CCCS------------------CHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSC
T ss_pred CCeEEEe-CCCC------------------CHHHHHH----HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3456777 3321 3455544 45566778999998764 236778777777776654
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLI 260 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l 260 (346)
++|+++==.. +++-..-+.+...+.. +.+++.+|=--|.....+..++
T Consensus 141 -~lPiilYn~P---~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~ 188 (304)
T 3l21_A 141 -ELPMLLYDIP---GRSAVPIEPDTIRALA-SHPNIVGVXDAKADLHSGAQIM 188 (304)
T ss_dssp -SSCEEEEECH---HHHSSCCCHHHHHHHH-TSTTEEEEEECSCCHHHHHHHH
T ss_pred -CCCEEEEeCc---cccCCCCCHHHHHHHh-cCCCEEEEECCCCCHHHHHHHh
Confidence 6999854211 1111223444444444 4445444444444555555555
No 286
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=49.08 E-value=1.5e+02 Score=27.05 Aligned_cols=86 Identities=14% Similarity=0.023 Sum_probs=55.3
Q ss_pred HHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh
Q 019107 175 LILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (346)
Q Consensus 175 ~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p 253 (346)
.+..++| ++++..+ +.+.+++...++.+++.. +.|+.+.+.+.+ .++.+.++.+.. .++++|-+++..|
T Consensus 30 ~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~-------~~~~~~~~~a~~-~g~d~V~~~~g~p 99 (332)
T 2z6i_A 30 GAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLT-DKPFGVNIMLLS-------PFVEDIVDLVIE-EGVKVVTTGAGNP 99 (332)
T ss_dssp HHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHC-CSCEEEEECTTS-------TTHHHHHHHHHH-TTCSEEEECSSCG
T ss_pred HHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhc-CCCEEEEecCCC-------CCHHHHHHHHHH-CCCCEEEECCCCh
Confidence 3444555 4777655 447788877777777754 589988886521 236777777655 4899999999877
Q ss_pred hhHHHHHHHHhhhcCCcEEEe
Q 019107 254 RFIHGLILSVRKVTSKPVIIY 274 (346)
Q Consensus 254 ~~~~~~l~~l~~~~~~pl~vy 274 (346)
..+...++ +. ..|+++.
T Consensus 100 ~~~i~~l~---~~-g~~v~~~ 116 (332)
T 2z6i_A 100 SKYMERFH---EA-GIIVIPV 116 (332)
T ss_dssp GGTHHHHH---HT-TCEEEEE
T ss_pred HHHHHHHH---Hc-CCeEEEE
Confidence 54433333 32 5666654
No 287
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=48.96 E-value=1.1e+02 Score=25.62 Aligned_cols=78 Identities=9% Similarity=0.016 Sum_probs=45.0
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p 253 (346)
++...+.|+|++ +-.... ..+++.+++.+ +|++..+ .+..++...++ .+++.+.++-..+
T Consensus 76 ~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g--~~vi~g~-----------~t~~e~~~a~~--~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPHLD----EEISQFCKEKG--VFYMPGV-----------MTPTELVKAMK--LGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHT--CEEECEE-----------CSHHHHHHHHH--TTCCEEEETTHHH
T ss_pred HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcC--CcEECCc-----------CCHHHHHHHHH--cCCCEEEEcCccc
Confidence 344555899999 443333 23567777766 8988532 23455555443 4788998874322
Q ss_pred hhHHHHHHHHhhhc-CCcEE
Q 019107 254 RFIHGLILSVRKVT-SKPVI 272 (346)
Q Consensus 254 ~~~~~~l~~l~~~~-~~pl~ 272 (346)
. -...++++.+.. +.|++
T Consensus 136 ~-g~~~~~~l~~~~~~~pvi 154 (205)
T 1wa3_A 136 V-GPQFVKAMKGPFPNVKFV 154 (205)
T ss_dssp H-HHHHHHHHHTTCTTCEEE
T ss_pred c-CHHHHHHHHHhCCCCcEE
Confidence 2 235566666544 45543
No 288
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=48.92 E-value=1.6e+02 Score=26.83 Aligned_cols=93 Identities=16% Similarity=0.031 Sum_probs=57.1
Q ss_pred HHHHHhCC-CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 174 VLILANSG-ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 174 i~~l~~~g-vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
+.+..++| +.++..+++++.+++...++.+++.. +.|+-+.+.+.+. + ...++.+.++.+.. .++++|-++...
T Consensus 32 a~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~--~-~~~~~~~~~~~~~~-~g~d~V~~~~g~ 106 (328)
T 2gjl_A 32 AAAVANAGGLATLSALTQPSPEALAAEIARCRELT-DRPFGVNLTLLPT--Q-KPVPYAEYRAAIIE-AGIRVVETAGND 106 (328)
T ss_dssp HHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-SSCCEEEEEECCC--S-SCCCHHHHHHHHHH-TTCCEEEEEESC
T ss_pred HHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecccc--c-cCccHHHHHHHHHh-cCCCEEEEcCCC
Confidence 34455555 56666677777888888787777754 5899888877521 0 12345677776655 367777776654
Q ss_pred hhhHHHHHHHHhhhcCCcEEEee
Q 019107 253 PRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
|. .+++.+++. ..|++...
T Consensus 107 p~---~~~~~l~~~-gi~vi~~v 125 (328)
T 2gjl_A 107 PG---EHIAEFRRH-GVKVIHKC 125 (328)
T ss_dssp CH---HHHHHHHHT-TCEEEEEE
T ss_pred cH---HHHHHHHHc-CCCEEeeC
Confidence 53 344444443 55665443
No 289
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=48.59 E-value=1.3e+02 Score=28.66 Aligned_cols=29 Identities=21% Similarity=0.189 Sum_probs=24.7
Q ss_pred cCCChHHHHHHHHHHHHhhcceeeccccc
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITASYQ 78 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~ 78 (346)
-+++++...++-+.-.++||++|.--+|.
T Consensus 151 sves~e~a~~~a~~~k~aGa~~vk~q~fk 179 (385)
T 3nvt_A 151 SVESYEQVAAVAESIKAKGLKLIRGGAFK 179 (385)
T ss_dssp BCCCHHHHHHHHHHHHHTTCCEEECBSSC
T ss_pred CcCCHHHHHHHHHHHHHcCCCeEEccccc
Confidence 35788999898888899999999888885
No 290
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=48.53 E-value=87 Score=28.18 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=19.6
Q ss_pred ChHHHHHHHHHHHHcCCeEEeecCCCc-hHHHHHHHHH
Q 019107 295 RDEDFVSYIGKWRDAGASLFGGCCRTT-PNTIKAISRV 331 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~G~~ivGGCCGt~-P~hI~al~~~ 331 (346)
.+++..++.+...+.|...+==|--+| ++.|+.+.+.
T Consensus 133 p~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~ 170 (267)
T 3vnd_A 133 PVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQ 170 (267)
T ss_dssp CGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHh
Confidence 344455555555566666554444443 3556666555
No 291
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=48.20 E-value=13 Score=28.35 Aligned_cols=48 Identities=25% Similarity=0.460 Sum_probs=33.0
Q ss_pred CChhhHHHHHHHHhhhcCCc----EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHH-cCC
Q 019107 251 TSPRFIHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD-AGA 311 (346)
Q Consensus 251 ~~p~~~~~~l~~l~~~~~~p----l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 311 (346)
..-+....+|..+.+.+.-| |+.||+.+. ..+|+.+++.+++|+. .|-
T Consensus 28 ~~E~e~d~ll~~fe~iteHP~gSDLIfyP~~~~-------------e~SPEgIv~~IKeWRa~nG~ 80 (94)
T 3u43_A 28 ATEEDDNKLVREFERLTEHPDGSDLIYYPRDDR-------------EDSPEGIVKEIKEWRAANGK 80 (94)
T ss_dssp SSHHHHHHHHHHHHHHHCCTTTTHHHHSCCTTS-------------CSSHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCCCCCccCeeeeCCCCC-------------CCCHHHHHHHHHHHHHHcCC
Confidence 34456667777776665444 777777752 1469999999999984 454
No 292
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=48.16 E-value=38 Score=32.17 Aligned_cols=50 Identities=14% Similarity=0.189 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 168 EFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
+.+.++++.|.+.| +|.|-+. ..|++.+++.+++.+.+.| +||+|| +.+.
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~~a~~G--l~i~iTElDi~ 266 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIAFAKLG--LRVHFTSLDVD 266 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHHHHhcC--CeEEEEecccC
Confidence 34556788888777 5999876 4588999999999998876 999998 4443
No 293
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=47.99 E-value=1.6e+02 Score=26.77 Aligned_cols=81 Identities=11% Similarity=-0.098 Sum_probs=43.8
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCC--CHHHHHHHhhcCCCc---eEEE
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGD--SILECASIADSCEQV---VAVG 247 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~--~~~~av~~~~~~~~~---~avG 247 (346)
.++.+.+.|+|.+-++.-.++.|++..+ ++.++=. ++. .+..|+ .+.+.++.+....+. ..++
T Consensus 244 ~l~~l~~~g~d~~~~d~~~dl~~~~~~~--------~~~l~Gn--~dp--~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~ 311 (338)
T 2eja_A 244 FIDLAVDYRADALSVDWSVDIPELFKIY--------DKGFQGN--LEP--AVLYASEEVIEEKTLGLLRRIPVKTRYVFN 311 (338)
T ss_dssp HHHHHTTSCCSEEECCTTSCHHHHHHHC--------CSEEECC--BCG--GGGGSCHHHHHHHHHHHHTTCCCSSSEEBC
T ss_pred HHHHHHHcCCCEEEeCCCCCHHHHHHhC--------CeEEEEC--CCH--HHhcCCHHHHHHHHHHHHHHhCCCCCeEEe
Confidence 3455778899999999777888766543 1333322 222 233342 333333333221222 3455
Q ss_pred ECCC-----ChhhHHHHHHHHhh
Q 019107 248 INCT-----SPRFIHGLILSVRK 265 (346)
Q Consensus 248 vNC~-----~p~~~~~~l~~l~~ 265 (346)
..|. .|+.+..+++..++
T Consensus 312 ~g~gi~~~~p~en~~a~v~~v~~ 334 (338)
T 2eja_A 312 LGHGLAPDMELEKVKYLVDLVKS 334 (338)
T ss_dssp BSSCCCTTSCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 5574 35777777776654
No 294
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=47.84 E-value=1.9e+02 Score=27.52 Aligned_cols=93 Identities=9% Similarity=0.073 Sum_probs=51.6
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS 252 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~ 252 (346)
.++.|.+-+||++=+-+. ++... ..++.+.+++ +||++|- |. .+=+.+..|++.+........+.+-|+.
T Consensus 126 svd~l~~~~vd~~KIgS~-~~~N~-pLL~~va~~g--KPViLSt-----Gm-aTl~Ei~~Ave~i~~~Gn~~iiLlhc~s 195 (385)
T 1vli_A 126 SADLLQSTSPSAFKIASY-EINHL-PLLKYVARLN--RPMIFST-----AG-AEISDVHEAWRTIRAEGNNQIAIMHCVA 195 (385)
T ss_dssp HHHHHHTTCCSCEEECGG-GTTCH-HHHHHHHTTC--SCEEEEC-----TT-CCHHHHHHHHHHHHTTTCCCEEEEEECS
T ss_pred HHHHHHhcCCCEEEECcc-cccCH-HHHHHHHhcC--CeEEEEC-----CC-CCHHHHHHHHHHHHHCCCCcEEEEeccC
Confidence 345565667888865532 11121 2344455555 9999886 21 1123445567766553223677778963
Q ss_pred --h---h-hHHHHHHHHhhhc-CCcEEEeeC
Q 019107 253 --P---R-FIHGLILSVRKVT-SKPVIIYPN 276 (346)
Q Consensus 253 --p---~-~~~~~l~~l~~~~-~~pl~vypN 276 (346)
| + .=+..+..|++.+ ..|+ .||.
T Consensus 196 ~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~Sd 225 (385)
T 1vli_A 196 KYPAPPEYSNLSVIPMLAAAFPEAVI-GFSD 225 (385)
T ss_dssp SSSCCGGGCCTTHHHHHHHHSTTSEE-EEEE
T ss_pred CCCCChhhcCHHHHHHHHHHcCCCCE-EeCC
Confidence 2 1 2245567777776 7888 4664
No 295
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=47.84 E-value=1.1e+02 Score=26.39 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=43.3
Q ss_pred HHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEE
Q 019107 172 RRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avG 247 (346)
+.++.+.++|+|.|.+=. ..........++.+++. .++|+++.--+ .+..++-..+. .++++|.
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~iPvi~~Ggi---------~~~~~~~~~~~--~Gad~V~ 102 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VFIPLTVGGGV---------RSLEDARKLLL--SGADKVS 102 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSC---------CSHHHHHHHHH--HTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHh-CCCCEEEECCc---------CCHHHHHHHHH--cCCCEEE
Confidence 356667778999876521 11222222233344443 25999974322 12444444443 2678888
Q ss_pred ECCC---ChhhHHHHHHHH
Q 019107 248 INCT---SPRFIHGLILSV 263 (346)
Q Consensus 248 vNC~---~p~~~~~~l~~l 263 (346)
+... .|+.+..+.+.+
T Consensus 103 lg~~~l~~p~~~~~~~~~~ 121 (252)
T 1ka9_F 103 VNSAAVRRPELIRELADHF 121 (252)
T ss_dssp ECHHHHHCTHHHHHHHHHH
T ss_pred EChHHHhCcHHHHHHHHHc
Confidence 8775 355566665554
No 296
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=47.41 E-value=50 Score=29.93 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=28.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE--ccCC
Q 019107 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAF--ETIP 191 (346)
Q Consensus 156 ~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~--ET~~ 191 (346)
+|+. -+.+++.++-.+.++.|.+.|+|+|++ -|.+
T Consensus 62 PYG~-ks~e~i~~~~~~~~~~L~~~g~d~IVIACNTa~ 98 (274)
T 3uhf_A 62 PYGV-KDKDTIIKFCLEALDFFEQFQIDMLIIACNTAS 98 (274)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh
Confidence 3443 488999999999999999999999986 4544
No 297
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=47.27 E-value=2e+02 Score=27.62 Aligned_cols=141 Identities=18% Similarity=0.149 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEcc-C---------CCHHHHHHHHHHHHHh-------------------CCCCc-EEEE
Q 019107 166 LKEFHRRRVLILANSGADLIAFET-I---------PNKLEAKAYAELLEEE-------------------GITIP-AWFS 215 (346)
Q Consensus 166 ~~~~~~~~i~~l~~~gvD~i~~ET-~---------~~~~E~~a~~~a~~~~-------------------~~~~p-v~is 215 (346)
..+.|.+-++.+.+. +|+|-+.- - .+.+.+..+++++++. ...+| |++-
T Consensus 197 ~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VK 275 (415)
T 3i65_A 197 IVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVK 275 (415)
T ss_dssp HHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEE
T ss_pred cHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEE
Confidence 445566677777654 89997662 2 2334555566665543 12588 8887
Q ss_pred EEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE-CCCC-----------------h---hhHHHHHHHHhhhc--CCcEE
Q 019107 216 FNSKDGINVVSGDSILECASIADSCEQVVAVGI-NCTS-----------------P---RFIHGLILSVRKVT--SKPVI 272 (346)
Q Consensus 216 ~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv-NC~~-----------------p---~~~~~~l~~l~~~~--~~pl~ 272 (346)
++..- +-+.+.++++.+.+ .++++|-+ |-+. + .....++.++++.. +.|++
T Consensus 276 i~pd~-----~~~~i~~iA~~a~~-aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPII 349 (415)
T 3i65_A 276 LAPDL-----NQEQKKEIADVLLE-TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII 349 (415)
T ss_dssp ECSCC-----CHHHHHHHHHHHHH-HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE
T ss_pred ecCCC-----CHHHHHHHHHHHHH-cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEE
Confidence 75421 11235666766655 36776544 4321 1 12235667777665 57765
Q ss_pred EeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCCC---chHHHHHHHHHHc
Q 019107 273 IYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRT---TPNTIKAISRVLS 333 (346)
Q Consensus 273 vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCGt---~P~hI~al~~~~~ 333 (346)
. +.|. .++++..+ .+..||..|.-+-+. +|.-++.|.+.+.
T Consensus 350 g--~GGI--------------~s~eDa~e----~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 350 A--SGGI--------------FSGLDALE----KIEAGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp E--CSSC--------------CSHHHHHH----HHHHTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred E--ECCC--------------CCHHHHHH----HHHcCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 4 3331 22344333 445788887765543 4777777766654
No 298
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=47.15 E-value=51 Score=28.37 Aligned_cols=88 Identities=18% Similarity=0.090 Sum_probs=47.7
Q ss_pred HHHHHHHhCCCCEEEEccCCC--H--HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEE
Q 019107 172 RRVLILANSGADLIAFETIPN--K--LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~--~--~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avG 247 (346)
++++.+.+.|+|++.+.+... . .....+++.+++...+.++++++ .++.++....+ .+++.||
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~-----------~t~~ea~~a~~--~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADI-----------STFDEGLVAHQ--AGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC-----------SSHHHHHHHHH--TTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeC-----------CCHHHHHHHHH--cCCCEEe
Confidence 356668889999998865421 1 12344556666642246766543 13555554443 4678883
Q ss_pred -----ECCCC---hhhHHHHHHHHhhhcCCcEEE
Q 019107 248 -----INCTS---PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 248 -----vNC~~---p~~~~~~l~~l~~~~~~pl~v 273 (346)
+|-.. ...-..+++++.+. +.|+++
T Consensus 159 ~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia 191 (234)
T 1yxy_A 159 TTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIA 191 (234)
T ss_dssp CTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEE
T ss_pred eeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEE
Confidence 33211 01112556666655 677654
No 299
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=47.14 E-value=1.2e+02 Score=26.42 Aligned_cols=101 Identities=11% Similarity=0.074 Sum_probs=59.8
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCC------cEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceE
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITI------PAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~------pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~a 245 (346)
++++...++|+||++- |...+ .+++.+++.+ + |++--+ .++.|+...++ .+++.
T Consensus 76 ~~a~~ai~AGA~fivs---P~~~~--evi~~~~~~~--v~~~~~~~~~PG~-----------~TptE~~~A~~--~Gad~ 135 (217)
T 3lab_A 76 DDFQKAIDAGAQFIVS---PGLTP--ELIEKAKQVK--LDGQWQGVFLPGV-----------ATASEVMIAAQ--AGITQ 135 (217)
T ss_dssp HHHHHHHHHTCSEEEE---SSCCH--HHHHHHHHHH--HHCSCCCEEEEEE-----------CSHHHHHHHHH--TTCCE
T ss_pred HHHHHHHHcCCCEEEe---CCCcH--HHHHHHHHcC--CCccCCCeEeCCC-----------CCHHHHHHHHH--cCCCE
Confidence 3556677899999985 44432 3455566654 6 777433 36788888765 47788
Q ss_pred EEECCCChhhH--HHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 246 VGINCTSPRFI--HGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 246 vGvNC~~p~~~--~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+.+- ..+.+ ...|+.++.... .+-+.|-.|. +++ .+.+|++.|+..+
T Consensus 136 vK~F--Pa~~~gG~~~lkal~~p~p-~i~~~ptGGI---------------~~~----N~~~~l~aGa~~~ 184 (217)
T 3lab_A 136 LKCF--PASAIGGAKLLKAWSGPFP-DIQFCPTGGI---------------SKD----NYKEYLGLPNVIC 184 (217)
T ss_dssp EEET--TTTTTTHHHHHHHHHTTCT-TCEEEEBSSC---------------CTT----THHHHHHSTTBCC
T ss_pred EEEC--ccccccCHHHHHHHHhhhc-CceEEEeCCC---------------CHH----HHHHHHHCCCEEE
Confidence 8763 21222 577888775431 1234455542 232 2456888886543
No 300
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=46.78 E-value=1.7e+02 Score=26.63 Aligned_cols=152 Identities=16% Similarity=0.134 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHHHhhcceee-ccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIII-TASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~-TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|. .-|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 76 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQ-FA-----ITDDERDVLTRTILEHV------------------------AG 76 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCc-cc-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 567888888888999999444 3343322 11 34455556666655533 13
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc-------CCCHHHHHHHHHHHH
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET-------IPNKLEAKAYAELLE 204 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET-------~~~~~E~~a~~~a~~ 204 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.
T Consensus 77 rvpviaGv-g~------------------~~t~~ai~----la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va 133 (309)
T 3fkr_A 77 RVPVIVTT-SH------------------YSTQVCAA----RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVS 133 (309)
T ss_dssp SSCEEEEC-CC------------------SSHHHHHH----HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHH
T ss_pred CCcEEEec-CC------------------chHHHHHH----HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHH
Confidence 34567773 22 13455544 55567778999998764 246678887777776
Q ss_pred HhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC-hhhHHHHHHH
Q 019107 205 EEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS-PRFIHGLILS 262 (346)
Q Consensus 205 ~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~-p~~~~~~l~~ 262 (346)
+.. ++|+++== +. . +--.-+.+...+..++.+++.+|=.-|++ ...+..+++.
T Consensus 134 ~a~-~lPiilYn-~P--~-tg~~l~~~~~~~La~~~pnIvgiK~~~~~~~~~~~~~~~~ 187 (309)
T 3fkr_A 134 DAI-AIPIMVQD-AP--A-SGTALSAPFLARMAREIEQVAYFXIETPGAANKLRELIRL 187 (309)
T ss_dssp HHC-SSCEEEEE-CG--G-GCCCCCHHHHHHHHHHSTTEEEEEECSSSHHHHHHHHHHH
T ss_pred Hhc-CCCEEEEe-CC--C-CCCCCCHHHHHHHHhhCCCEEEEECCCcchHHHHHHHHHh
Confidence 654 69988532 22 1 11223444444444334455444334654 3555555544
No 301
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=46.67 E-value=1.6e+02 Score=27.23 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=53.3
Q ss_pred CcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc--------CCCHHHHHHH---HH
Q 019107 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET--------IPNKLEAKAY---AE 201 (346)
Q Consensus 133 ~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET--------~~~~~E~~a~---~~ 201 (346)
+.+|-|-+=-+.+.+.||..|. +.+++.+ +++.+.+.|+|+|=+-- ++..+|++-+ ++
T Consensus 41 ~~~vMGIlNvTPDSFsdgg~~~-------~~~~a~~----~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~ 109 (318)
T 2vp8_A 41 RALIMAIVNRTPDSFYDKGATF-------SDAAARD----AVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIE 109 (318)
T ss_dssp SCEEEEEEC---------------------CHHHHH----HHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCcccCCCccC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 4567777766667777775442 3345544 56677789999996652 2336677666 45
Q ss_pred HHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH-hhcCCCceEEEECCCC---hhhHHHHHHHHhhhcCCcEEEeeCC
Q 019107 202 LLEEEGITIPAWFSFNSKDGINVVSGDSILECASI-ADSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVIIYPNS 277 (346)
Q Consensus 202 a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~-~~~~~~~~avGvNC~~---p~~~~~~l~~l~~~~~~pl~vypN~ 277 (346)
++++.- ..+.||+.. .. .++++. ++. +++ .||=.+ -+.+.+++.+ .+.|+++.++.
T Consensus 110 ~l~~~~--~~vpISIDT---------~~-~~VaeaAl~a--Ga~--iINDVsg~~d~~m~~vaa~----~g~~vVlmh~~ 169 (318)
T 2vp8_A 110 WLRGAY--PDQLISVDT---------WR-AQVAKAACAA--GAD--LINDTWGGVDPAMPEVAAE----FGAGLVCAHTG 169 (318)
T ss_dssp HHHHHS--TTCEEEEEC---------SC-HHHHHHHHHH--TCC--EEEETTSSSSTTHHHHHHH----HTCEEEEECC-
T ss_pred HHHhhC--CCCeEEEeC---------CC-HHHHHHHHHh--CCC--EEEECCCCCchHHHHHHHH----hCCCEEEECCC
Confidence 555431 135566632 22 233333 332 333 355432 2334444333 37899999987
Q ss_pred CC
Q 019107 278 GE 279 (346)
Q Consensus 278 g~ 279 (346)
|.
T Consensus 170 G~ 171 (318)
T 2vp8_A 170 GA 171 (318)
T ss_dssp --
T ss_pred CC
Confidence 64
No 302
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=46.63 E-value=1.4e+02 Score=26.17 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC-----CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP-----NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~-----~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~ 237 (346)
.+.+.+..++..+...+.||. |.+|+.+ +..++..+ +++.+ .| .+.+.++..-....|.++.+.++.+
T Consensus 142 ~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~l---~~~v~--~~-~vg~~~D~~h~~~~g~d~~~~l~~~ 214 (295)
T 3cqj_A 142 RRRFRDGLKESVEMASRAQVT-LAMEIMDYPLMNSISKALGY---AHYLN--NP-WFQLYPDIGNLSAWDNDVQMELQAG 214 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTCE-EEEECCSSGGGCSHHHHHHH---HHHHC--CT-TEEEECBHHHHHSSSCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCE-EEEeeCCCcccCCHHHHHHH---HHhcC--CC-CeEEEeccchHhhcCCCHHHHHHHh
Confidence 445556666666666678886 5669876 45555544 44444 23 2344443222234577887777765
No 303
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=46.53 E-value=80 Score=30.12 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHH-HHhCCCCEEEEcc---CCCHH-HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHH
Q 019107 161 VSLETLKEFHRRRVLI-LANSGADLIAFET---IPNKL-EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~-l~~~gvD~i~~ET---~~~~~-E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~ 235 (346)
.+.+.+.+. ++. +.+.+||.+++-. +.+.+ =++++++++++.+.++|+++.+ .|+...+..+
T Consensus 300 a~~e~~~~a----l~~il~d~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl---------~G~n~~~g~~ 366 (395)
T 2fp4_B 300 VKESQVYQA----FKLLTADPKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRL---------EGTNVHEAQN 366 (395)
T ss_dssp CCHHHHHHH----HHHHHHCTTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEE---------EETTHHHHHH
T ss_pred CCHHHHHHH----HHHHhCCCCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEc---------CCCCHHHHHH
Confidence 466655554 343 4568999998643 35544 4678889999876679999865 5666777777
Q ss_pred Hhhc
Q 019107 236 IADS 239 (346)
Q Consensus 236 ~~~~ 239 (346)
.+..
T Consensus 367 ~L~~ 370 (395)
T 2fp4_B 367 ILTN 370 (395)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 304
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=46.19 E-value=74 Score=25.26 Aligned_cols=19 Identities=11% Similarity=0.300 Sum_probs=9.0
Q ss_pred HHhCCCCEEEEccCCCHHH
Q 019107 177 LANSGADLIAFETIPNKLE 195 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E 195 (346)
|...|.+.+-+......+|
T Consensus 27 l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 27 FTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp HHHTTCEEEEEEEEECHHH
T ss_pred HHHCCCEEEECCCCCCHHH
Confidence 3345555555544444444
No 305
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=46.18 E-value=1.8e+02 Score=26.71 Aligned_cols=159 Identities=8% Similarity=0.064 Sum_probs=88.5
Q ss_pred cCCChHHHHHHHHHHHHhhc----ceeeccccc-cCHHhHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 019107 50 LVSSPHLVRKVHLDYLDAGA----NIIITASYQ-ATIQGFE-AKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDF 123 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA----~iI~TnTy~-as~~~l~-~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~ 123 (346)
.++++|.+.++=+..-++|+ .+|..+.|. +++-... ..|+.. ..++++.+++++++
T Consensus 50 sies~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~-------~~GL~~L~~~~~e~----------- 111 (298)
T 3fs2_A 50 QMETRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGL-------EKALEVFSDLKKEY----------- 111 (298)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCH-------HHHHHHHHHHHHHH-----------
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCH-------HHHHHHHHHHHHhc-----------
Confidence 37899998888877777764 466666664 2333321 224432 24556666666543
Q ss_pred CCCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC--CCHHHHHHHHH
Q 019107 124 TGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI--PNKLEAKAYAE 201 (346)
Q Consensus 124 ~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~--~~~~E~~a~~~ 201 (346)
+ +.++-++ .+. ++++.+.+- ||++-+-.+ .+.. .++
T Consensus 112 -------G--Lpv~Tev--------------------~D~--------~~v~~l~~~-vd~lkIgA~~~~n~~----LLr 149 (298)
T 3fs2_A 112 -------G--FPVLTDI--------------------HTE--------EQCAAVAPV-VDVLQIPAFLCRQTD----LLI 149 (298)
T ss_dssp -------C--CCEEEEC--------------------CSH--------HHHHHHTTT-CSEEEECGGGTTCHH----HHH
T ss_pred -------C--CeEEEEe--------------------CCH--------HHHHHHHhh-CCEEEECccccCCHH----HHH
Confidence 1 2222211 132 234445554 999987653 3443 344
Q ss_pred HHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC---hhh---HHHHHHHHhhhcCCcEEEee
Q 019107 202 LLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS---PRF---IHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 202 a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~---p~~---~~~~l~~l~~~~~~pl~vyp 275 (346)
.+.+++ +||.++- +.-.+=+.+..+++.+........+.+-|+. +.. =...+..+++ +..|+++.|
T Consensus 150 ~va~~g--kPVilK~-----Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~ 221 (298)
T 3fs2_A 150 AAARTG--RVVNVKK-----GQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDA 221 (298)
T ss_dssp HHHHTT--SEEEEEC-----CTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHHT-TTSCEEEEH
T ss_pred HHHccC--CcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcC
Confidence 455554 9999764 2111334567888887654345678888863 222 1445667777 689998865
Q ss_pred C
Q 019107 276 N 276 (346)
Q Consensus 276 N 276 (346)
.
T Consensus 222 s 222 (298)
T 3fs2_A 222 T 222 (298)
T ss_dssp H
T ss_pred C
Confidence 3
No 306
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=45.92 E-value=55 Score=32.68 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=59.4
Q ss_pred HHHHHhCCCCEEEEccCCCHHH-------------HHHHHHHHHHhCCCCcEEEEEEEcC--------------------
Q 019107 174 VLILANSGADLIAFETIPNKLE-------------AKAYAELLEEEGITIPAWFSFNSKD-------------------- 220 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E-------------~~a~~~a~~~~~~~~pv~is~~~~~-------------------- 220 (346)
++.+.++|+|.+.+-|-- +.. -..+-+++++++ +-.+++++.++.
T Consensus 353 a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~ 430 (555)
T 1jvn_A 353 ASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYG-AQAVVISVDPKRVYVNSQADTKNKVFETEYPG 430 (555)
T ss_dssp HHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHC-GGGEEEEECEEEEEESSGGGCSSCCEECSSCC
T ss_pred HHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhC-CCcEEEEEEccccccccccccccccccccccC
Confidence 444666899999998764 322 123445556666 346888988742
Q ss_pred -CC------c-ccCC------CCHHHHHHHhhcCCCceEEEECCCChhh-----HHHHHHHHhhhcCCcEEE
Q 019107 221 -GI------N-VVSG------DSILECASIADSCEQVVAVGINCTSPRF-----IHGLILSVRKVTSKPVII 273 (346)
Q Consensus 221 -~~------~-l~~G------~~~~~av~~~~~~~~~~avGvNC~~p~~-----~~~~l~~l~~~~~~pl~v 273 (346)
++ + ..+| .+..+.++.+.+ .+++.|-+++...+- =..+++.+.+..+.|+++
T Consensus 431 ~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~-~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~~iPVIa 501 (555)
T 1jvn_A 431 PNGEKYCWYQCTIKGGRESRDLGVWELTRACEA-LGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA 501 (555)
T ss_dssp TTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHH-TTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEE
T ss_pred CCCCcceeEEEEEecCccCCCCCHHHHHHHHHH-cCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhCCccEEE
Confidence 12 0 1122 245567777765 578888887742111 156778888878899765
No 307
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=45.85 E-value=94 Score=27.74 Aligned_cols=64 Identities=23% Similarity=0.245 Sum_probs=45.8
Q ss_pred HHHHHHhCCCCEEEEc-cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCC-CceEEEECC
Q 019107 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCE-QVVAVGINC 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~-~~~avGvNC 250 (346)
|+......|+|.+++- ++-+..+++..++.+++.| +-+++-+. +.+++...+. . +++.||+|=
T Consensus 115 qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG--l~~lvEv~-----------~~eE~~~A~~--l~g~~iIGinn 179 (251)
T 1i4n_A 115 QVKLASSVGADAILIIARILTAEQIKEIYEAAEELG--MDSLVEVH-----------SREDLEKVFS--VIRPKIIGINT 179 (251)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT--CEEEEEEC-----------SHHHHHHHHT--TCCCSEEEEEC
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHh--cCCCCEEEEeC
Confidence 4445667999998765 5556678899999998876 77776662 3456555443 4 789999998
Q ss_pred C
Q 019107 251 T 251 (346)
Q Consensus 251 ~ 251 (346)
.
T Consensus 180 r 180 (251)
T 1i4n_A 180 R 180 (251)
T ss_dssp B
T ss_pred c
Confidence 4
No 308
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=45.83 E-value=2.5e+02 Score=30.76 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-c--CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSGADLIAFE-T--IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T--~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+++.+.++.+.+.|+|.|.+= | +..+.++..+++++++.- .+-++|.+.++. |..++.++..++
T Consensus 709 ~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~---~~~i~~H~Hnd~----GlAvAn~laAv~ 775 (1165)
T 2qf7_A 709 KYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT---GLPIHFHTHDTS----GIAAATVLAAVE 775 (1165)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC---SSCEEEEECBTT----SCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc---CCeEEEEECCCC----CHHHHHHHHHHH
Confidence 467777888999999998765 3 336889999999988742 345677777654 444555555443
No 309
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=45.77 E-value=44 Score=31.73 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCC--CEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 168 EFHRRRVLILANSGA--DLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~gv--D~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
+.+.++++.|.+.|+ |.|=+. ..|++.+++..++.+...| +||||| +.+.
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~a~lG--lpI~iTElDi~ 269 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMFAALG--LDNQITELDVS 269 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHHHHTT--CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHHHhcC--CeEEEeecccc
Confidence 345567888888885 999764 2478899999999999877 999999 5454
No 310
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=45.36 E-value=48 Score=31.80 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCC--CCEEEEcc-----CCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 169 FHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 169 ~~~~~i~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
.+.+.++.|.+.| +|.|=+.. .|++.+++..++.+.+.+ +||+|+ +.+.
T Consensus 184 ~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~~~~~~~~~l~~~a~~g--~~v~iTEldv~ 240 (436)
T 2d1z_A 184 GVYNMVRDFKQRGVPIDCVGFQSHFNSGSPYNSNFRTTLQNFAALG--VDVAITELDIQ 240 (436)
T ss_dssp HHHHHHHHHHHHTCCCCEEEECCEEBTTBCCCTTHHHHHHHHHTTT--CEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCcccEEEEeeEEcCCCCCHHHHHHHHHHHHHcC--CeEEEeecchh
Confidence 3445677777766 59986643 255678888888888766 999998 4343
No 311
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=45.19 E-value=62 Score=31.23 Aligned_cols=86 Identities=19% Similarity=0.211 Sum_probs=48.0
Q ss_pred CcEEEEEEEcCCCcccC-CCCHHHHHHHhhcCCCceEEEECCCCh-----------hhHHHHHHHHhhh-----------
Q 019107 210 IPAWFSFNSKDGINVVS-GDSILECASIADSCEQVVAVGINCTSP-----------RFIHGLILSVRKV----------- 266 (346)
Q Consensus 210 ~pv~is~~~~~~~~l~~-G~~~~~av~~~~~~~~~~avGvNC~~p-----------~~~~~~l~~l~~~----------- 266 (346)
.|+.+++.- +..+.+ =++..++++.+.. .+++|-|||++| +.+..+++.+++.
T Consensus 182 ~~vgvnIg~--nk~t~~~~~Dy~~~a~~l~~--~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~ 257 (415)
T 3i65_A 182 HIVGVSIGK--NKDTVNIVDDLKYCINKIGR--YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMN 257 (415)
T ss_dssp CEEEEEECC--CTTCSCHHHHHHHHHHHHGG--GCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred ceEEEEecc--ccCccccHHHHHHHHHHHHh--hCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccccc
Confidence 567777721 111111 1233445555543 378999998754 3455666666553
Q ss_pred ---------cCCc-EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 267 ---------TSKP-VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 267 ---------~~~p-l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
.++| +.|.-..+ ++.+++.+.++...+.|+..|
T Consensus 258 ~~~~~~~~~~~~P~V~VKi~pd---------------~~~~~i~~iA~~a~~aGaDgI 300 (415)
T 3i65_A 258 DEFLWFNTTKKKPLVFVKLAPD---------------LNQEQKKEIADVLLETNIDGM 300 (415)
T ss_dssp HHHHCCSSSSSCCEEEEEECSC---------------CCHHHHHHHHHHHHHHTCSEE
T ss_pred ccccccccCCCCCeEEEEecCC---------------CCHHHHHHHHHHHHHcCCcEE
Confidence 2578 67763221 234567777777777776544
No 312
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=45.17 E-value=1.3e+02 Score=28.28 Aligned_cols=146 Identities=10% Similarity=0.041 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC----------C-----------CH-HH---HHHHHHHHHH-hCCCCcEEEE
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEE-EGITIPAWFS 215 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~a~~~-~~~~~pv~is 215 (346)
+.+++.+.|.+.++.+.++|.|.|=+--- | ++ .. +..+++++++ .+.+ ||.+-
T Consensus 160 eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~v~vr 238 (377)
T 2r14_A 160 EIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE-RVGIR 238 (377)
T ss_dssp GHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-cEEEE
Confidence 34555667777777788899999854211 1 11 22 3444566665 3433 89988
Q ss_pred EEEcCCC-cccCCCCHHHHHHH---hhcCCCceEEEECCCC----hh-hHHHHHHHHhhhcCCcEEEeeCCCCccccccc
Q 019107 216 FNSKDGI-NVVSGDSILECASI---ADSCEQVVAVGINCTS----PR-FIHGLILSVRKVTSKPVIIYPNSGETYNAELK 286 (346)
Q Consensus 216 ~~~~~~~-~l~~G~~~~~av~~---~~~~~~~~avGvNC~~----p~-~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~ 286 (346)
++..+.. .+.+|.++.++++. +++ .+++.|-+-... +. .-..+++.+++..+.|+++ |.|
T Consensus 239 ls~~~~~~~~~~~~~~~~~~~la~~le~-~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~--~Gg-------- 307 (377)
T 2r14_A 239 LTPFLELFGLTDDEPEAMAFYLAGELDR-RGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY--CGN-------- 307 (377)
T ss_dssp ECTTCCCTTCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE--ESS--------
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHH-cCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE--ECC--------
Confidence 8754321 12346666665544 434 478887775421 11 0134566777777888765 232
Q ss_pred cccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHH
Q 019107 287 KWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISR 330 (346)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~ 330 (346)
+++++ +.+.++.| +.+|+=+-+ ..|+-.+++++
T Consensus 308 -------i~~~~----a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 308 -------YDAGR----AQARLDDNTADAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp -------CCHHH----HHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred -------CCHHH----HHHHHHCCCceEEeecHHHHhCchHHHHHHc
Confidence 12332 23455555 666664322 36777777654
No 313
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=45.13 E-value=2e+02 Score=27.02 Aligned_cols=106 Identities=13% Similarity=-0.020 Sum_probs=60.9
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~-~~-----Ls~eEr~~vi~~~ve~~------------------------~g 127 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEG-QL-----MSWDEHIMLIGHTVNCF------------------------GG 127 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 4578888888889999995443 333311 11 34455555665555432 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+ -++.+++..-.+.+.+.
T Consensus 128 rvpViaG-vg~------------------~st~eai~----la~~A~~~Gadavlvv~PyY~k~sq~gl~~hf~~IA~a- 183 (360)
T 4dpp_A 128 SIKVIGN-TGS------------------NSTREAIH----ATEQGFAVGMHAALHINPYYGKTSIEGLIAHFQSVLHM- 183 (360)
T ss_dssp TSEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHTTGGG-
T ss_pred CCeEEEe-cCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh-
Confidence 3346666 222 13445443 45566678999988654 23666666666555542
Q ss_pred CCCcEEE
Q 019107 208 ITIPAWF 214 (346)
Q Consensus 208 ~~~pv~i 214 (346)
.|+++
T Consensus 184 --~Piil 188 (360)
T 4dpp_A 184 --GPTII 188 (360)
T ss_dssp --SCEEE
T ss_pred --CCEEE
Confidence 68763
No 314
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=44.48 E-value=12 Score=34.90 Aligned_cols=25 Identities=32% Similarity=0.321 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++....|.+.+..|-+||||+|+|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (330)
T 1pv8_A 294 FDLKAAVLEAMTAFRRAGADIIITY 318 (330)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 4667789999999999999999974
No 315
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=44.44 E-value=1.8e+02 Score=28.01 Aligned_cols=84 Identities=11% Similarity=0.107 Sum_probs=49.9
Q ss_pred HHHHHHHHHH-hCCCCEEEEccC-------CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcC
Q 019107 169 FHRRRVLILA-NSGADLIAFETI-------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSC 240 (346)
Q Consensus 169 ~~~~~i~~l~-~~gvD~i~~ET~-------~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~ 240 (346)
.|++.++.+. +.+||.+++--. .....+..+++++++...++|+++++. .|+...+..+.+.+
T Consensus 355 ~~~~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~--------~g~~~~~~~~~L~~- 425 (457)
T 2csu_A 355 DYYRTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFM--------AGYVSEKAKELLEK- 425 (457)
T ss_dssp HHHHHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEE--------CTTTTHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeC--------CCcchHHHHHHHHh-
Confidence 4556666665 588999987432 113445677777777433599988763 24444667776654
Q ss_pred CCceEEEECCCChhhHHHHHHHHhh
Q 019107 241 EQVVAVGINCTSPRFIHGLILSVRK 265 (346)
Q Consensus 241 ~~~~avGvNC~~p~~~~~~l~~l~~ 265 (346)
.++-.+ ..|+.....+..+.+
T Consensus 426 ~Gip~~----~spe~Av~al~~l~~ 446 (457)
T 2csu_A 426 NGIPTY----ERPEDVASAAYALVE 446 (457)
T ss_dssp TTCCEE----SSHHHHHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHHHH
Confidence 344333 457665555555443
No 316
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=44.43 E-value=89 Score=31.14 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCEEEE-ccCCC----HHHHHHHHHHHHHhCCCCcEEEEEEEc------CC-CcccC-CCCHHHHHHH
Q 019107 170 HRRRVLILANSGADLIAF-ETIPN----KLEAKAYAELLEEEGITIPAWFSFNSK------DG-INVVS-GDSILECASI 236 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~-ET~~~----~~E~~a~~~a~~~~~~~~pv~is~~~~------~~-~~l~~-G~~~~~av~~ 236 (346)
+.++++.+.++||++|-+ |--.+ .+.++.+.+..++.+ .|++|.=.++ -+ -++.. ..++.++-+.
T Consensus 27 l~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~--v~liIND~~dlA~~~gAdGVHLgq~dl~~~~ar~~ 104 (540)
T 3nl6_A 27 LYGQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHN--VPLIINDRIDVAMAIGADGIHVGQDDMPIPMIRKL 104 (540)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTT--CCEEECSCSHHHHHTTCSEEEECTTSSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcC--CEEEEeCcHHHHHHcCCCEEEEChhhcCHHHHHHH
Confidence 445777888899999976 32222 233444455556654 8888742111 01 12221 1234433333
Q ss_pred hhcCCCceEEEECCCChhhHHHH
Q 019107 237 ADSCEQVVAVGINCTSPRFIHGL 259 (346)
Q Consensus 237 ~~~~~~~~avGvNC~~p~~~~~~ 259 (346)
+ . .+ .-||+.|..++.+..+
T Consensus 105 l-g-~~-~iiG~S~ht~eea~~A 124 (540)
T 3nl6_A 105 V-G-PD-MVIGWSVGFPEEVDEL 124 (540)
T ss_dssp H-C-TT-SEEEEEECSHHHHHHH
T ss_pred h-C-CC-CEEEEECCCHHHHHHH
Confidence 3 2 12 3689999877655444
No 317
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=44.35 E-value=76 Score=26.02 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=32.7
Q ss_pred CCHHHHHHHhhcCCCceEEEECCCC---hhhHHHHHHHHhhhc--CCcEEE
Q 019107 228 DSILECASIADSCEQVVAVGINCTS---PRFIHGLILSVRKVT--SKPVII 273 (346)
Q Consensus 228 ~~~~~av~~~~~~~~~~avGvNC~~---p~~~~~~l~~l~~~~--~~pl~v 273 (346)
.+++++++.+.. .+++.||+.|.. .+.+..+++.+++.. +.++++
T Consensus 56 ~p~e~lv~aa~~-~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~v 105 (161)
T 2yxb_A 56 QTPEQVAMAAVQ-EDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVL 105 (161)
T ss_dssp CCHHHHHHHHHH-TTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 578888888766 478999999863 467788888887752 355555
No 318
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=44.30 E-value=2e+02 Score=26.79 Aligned_cols=40 Identities=13% Similarity=0.103 Sum_probs=31.2
Q ss_pred ChHHHHHHHHHHHHc----CCeEEeecCC----CchHHHHHHHHHHcC
Q 019107 295 RDEDFVSYIGKWRDA----GASLFGGCCR----TTPNTIKAISRVLSN 334 (346)
Q Consensus 295 ~~~~~~~~~~~~~~~----G~~ivGGCCG----t~P~hI~al~~~~~~ 334 (346)
++++..+.+++.++. |--|++--|| |.|++++++.+++++
T Consensus 310 t~e~I~~~v~~~l~~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~ 357 (368)
T 4exq_A 310 PPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHR 357 (368)
T ss_dssp CHHHHHHHHHHHHHHHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHH
Confidence 478888888888753 3578887788 468999999888765
No 319
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=44.03 E-value=1.6e+02 Score=27.66 Aligned_cols=143 Identities=8% Similarity=0.037 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHH--------------------HHHHHHHHHHhCC----CCcEEEEEEE
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIPNKLE--------------------AKAYAELLEEEGI----TIPAWFSFNS 218 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E--------------------~~a~~~a~~~~~~----~~pv~is~~~ 218 (346)
.+++.+.+++-++.|.++|+++|-+-- |.+.+ +..++++++..-. +.++.+.+ |
T Consensus 162 ~~~la~a~~~ei~~l~~aG~~~IQiDe-P~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~~~~i~~Hi-C 239 (375)
T 1ypx_A 162 ANDLATAYQKAIQAFYDAGCRYLQLDD-TSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHI-C 239 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEE-CHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCTTCEEEEEE-C
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEecC-CchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEE-e
Confidence 456777899999999999999774321 22221 3445566555321 24555555 4
Q ss_pred cCC---CcccCCCCHHHHHHHhhcCCCceEEEECCCCh-h-hHHHHHHHHhhh-cCCcEEEeeCCCCccccccccccccC
Q 019107 219 KDG---INVVSGDSILECASIADSCEQVVAVGINCTSP-R-FIHGLILSVRKV-TSKPVIIYPNSGETYNAELKKWVEST 292 (346)
Q Consensus 219 ~~~---~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p-~-~~~~~l~~l~~~-~~~pl~vypN~g~~~~~~~~~~~~~~ 292 (346)
..+ ....+| .+.+.+..+....+++++.+-+... . .+ ..|+.+... ...-+++++.. . .+.
T Consensus 240 ~gn~~s~~~~~g-~~~~i~~~l~~~~~~d~i~lE~~~~r~g~~-e~L~~~~~~~~~v~lGvvd~~-------~-~~~--- 306 (375)
T 1ypx_A 240 RGNFRSTWIAEG-GYGPVAETLFGKLNIDGFFLEYDNERSGDF-APLKYVTRPDLKIVLGLITSK-------T-GEL--- 306 (375)
T ss_dssp CC-----------CCSGGGHHHHTTCCCSEEEEECCSCC---C-CTTCCCCCTTCEEEEEEECSS-------S-CC----
T ss_pred ccccCCcccccc-chHHHHHHHHhhCCCCEEEEEecCCCCCcH-HHHHHhhhcCCeEEEeeecCc-------C-CCC---
Confidence 332 223333 2334556665125799999998642 2 22 222222110 01113333221 1 112
Q ss_pred CCChHHHHHHHHHHHHc-CCe--EEeecCCCc
Q 019107 293 GVRDEDFVSYIGKWRDA-GAS--LFGGCCRTT 321 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~-G~~--ivGGCCGt~ 321 (346)
-++++..+.+++..+. |.. ++.=-||-.
T Consensus 307 -e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~ 337 (375)
T 1ypx_A 307 -EDEAAIKARIEEASEIVPLSQLRLSPQCGFA 337 (375)
T ss_dssp -CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC
T ss_pred -CCHHHHHHHHHHHHHhcCccceEecCCCCcc
Confidence 3578888888777654 765 788889866
No 320
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=43.93 E-value=1.9e+02 Score=26.37 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=83.2
Q ss_pred ChHHHHHHHHHHHHhhcceeecc-ccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|..+ |-+-. . -++.++-.++++.+++.+ .+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~-----~Ls~eEr~~vi~~~~~~~------------------------~g 80 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEF-Y-----ALTIEEAKQVATRVTELV------------------------NG 80 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTG-G-----GSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 56788888888999999976644 43321 1 234455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. . .++.. ++++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 81 rvpViaGv-g~-s------------------t~~ai----~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (314)
T 3d0c_A 81 RATVVAGI-GY-S------------------VDTAI----ELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL 136 (314)
T ss_dssp SSEEEEEE-CS-S------------------HHHHH----HHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS
T ss_pred CCeEEecC-Cc-C------------------HHHHH----HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 34566773 32 2 23333 3566677799999987542 46777777776666543
Q ss_pred CCCcEEEEEEEcCCCcccCC-CCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSG-DSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G-~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++== +.| -+.+...+.+ +.+++.+|=--|.....+..+++.
T Consensus 137 -~lPiilYn--------~tg~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~~ 182 (314)
T 3d0c_A 137 -DAPSIIYF--------KDAHLSDDVIKELA-PLDKLVGIKYAINDIQRVTQVMRA 182 (314)
T ss_dssp -SSCEEEEE--------CCTTSCTHHHHHHT-TCTTEEEEEECCCCHHHHHHHHHH
T ss_pred -CCCEEEEe--------CCCCcCHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHHh
Confidence 59988643 223 2334344433 334444444444455555555443
No 321
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=43.82 E-value=1.8e+02 Score=26.21 Aligned_cols=27 Identities=11% Similarity=0.193 Sum_probs=20.6
Q ss_pred CChHHHHHHHHHHHHhhcceeeccccccCH
Q 019107 52 SSPHLVRKVHLDYLDAGANIIITASYQATI 81 (346)
Q Consensus 52 ~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~ 81 (346)
.+++.+++. -..+||+||+..+-+.++
T Consensus 23 ~~~~~~~~a---i~asg~eivtva~rR~~~ 49 (268)
T 2htm_A 23 EDFGVMREA---IAAAKAEVVTVSVRRVEL 49 (268)
T ss_dssp SCHHHHHHH---HHHTTCSEEEEEEEECC-
T ss_pred CCHHHHHHH---HHHhCCCEEEEEccccCC
Confidence 567766654 668999999999988775
No 322
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=43.81 E-value=1.9e+02 Score=26.27 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=86.5
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++++.+++.+ .+
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~-~-----~Ls~eEr~~vi~~~~~~~------------------------~g 80 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGES-P-----TVNEDEREKLVSRTLEIV------------------------DG 80 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTG-G-----GCCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccch-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888889999995543 333311 1 234455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+..
T Consensus 81 rvpViaGv-g~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 81 KIPVIVGA-GT------------------NSTEKTLK----LVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp SSCEEEEC-CC------------------SCHHHHHH----HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCeEEEcC-CC------------------ccHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 33467772 22 13445544 45566778999998754 246777777777766643
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSV 263 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l 263 (346)
++|+++==.. .++--.-+.+...+.+++.+++.+|=--|.....+..+++..
T Consensus 138 -~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnIvgiKdssgd~~~~~~~~~~~ 189 (306)
T 1o5k_A 138 -DLGIVVYNVP---GRTGVNVLPETAARIAADLKNVVGIXEANPDIDQIDRTVSLT 189 (306)
T ss_dssp -SSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECCCCHHHHHHHHHHH
T ss_pred -CCCEEEEeCc---cccCcCCCHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHhc
Confidence 6998853211 111112344444444423345544444444556666665544
No 323
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=43.73 E-value=1.9e+02 Score=26.20 Aligned_cols=118 Identities=18% Similarity=0.175 Sum_probs=62.2
Q ss_pred CcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEE---------ccCCCHHHHHHHHHHH
Q 019107 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAF---------ETIPNKLEAKAYAELL 203 (346)
Q Consensus 133 ~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~---------ET~~~~~E~~a~~~a~ 203 (346)
+.+|-|-+==+.+.+.||..| .+.+.+.+ +++.+.+.|+|+|=+ +.++.-+|+.-++-++
T Consensus 6 r~~iMGIlNvTPDSFsDGG~~-------~~~~~a~~----~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi 74 (270)
T 4hb7_A 6 KTKIMGILNVTPDSFSDGGKF-------NNVETAIN----RVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVV 74 (270)
T ss_dssp CCEEEEEEECC-----------------CHHHHHHH----HHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCCCCCCCC-------CCHHHHHH----HHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHH
Confidence 456777776677777776433 24444443 677788899999965 4566677887777666
Q ss_pred HHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC----ChhhHHHHHHHHhhhcCCcEEEeeCCCC
Q 019107 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT----SPRFIHGLILSVRKVTSKPVIIYPNSGE 279 (346)
Q Consensus 204 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~----~p~~~~~~l~~l~~~~~~pl~vypN~g~ 279 (346)
+... ...+.||+.. .- .++++.+.. .+++. ||=. ....|..++.+ .+.|++++.+.|.
T Consensus 75 ~~l~-~~~v~iSIDT---------~~-~~Va~~al~-aGa~i--INDVs~g~~d~~m~~~va~----~~~~~vlMH~~~~ 136 (270)
T 4hb7_A 75 EAIV-GFDVKISVDT---------FR-SEVAEACLK-LGVDM--INDQWAGLYDHRMFQIVAK----YDAEIILMHNGNG 136 (270)
T ss_dssp HHHT-TSSSEEEEEC---------SC-HHHHHHHHH-HTCCE--EEETTTTSSCTHHHHHHHH----TTCEEEEECCCSS
T ss_pred HHhh-cCCCeEEEEC---------CC-HHHHHHHHH-hccce--eccccccccchhHHHHHHH----cCCCeEEeccccC
Confidence 6643 3457777732 11 233443322 24443 5532 12334444333 3678888877664
No 324
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=43.69 E-value=1.4e+02 Score=25.86 Aligned_cols=140 Identities=12% Similarity=-0.023 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCC
Q 019107 54 PHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRP 133 (346)
Q Consensus 54 Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (346)
++.+.++-+..-+.|-.+...++|..++. .+ ..++..+..++.+++|++. +.+
T Consensus 47 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~A~~l----------------------G~~ 99 (286)
T 3dx5_A 47 YETTERELNCLKDKTLEITMISDYLDISL----SA-DFEKTIEKCEQLAILANWF----------------------KTN 99 (286)
T ss_dssp HHHHHHHHHHTGGGTCCEEEEECCCCCST----TS-CHHHHHHHHHHHHHHHHHH----------------------TCC
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCCCC----ch-hHHHHHHHHHHHHHHHHHh----------------------CCC
Confidence 45566666666677888776655542211 01 1234445666677766654 223
Q ss_pred cEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCC-----CHHHHHHHHHHHHHhCC
Q 019107 134 VLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIP-----NKLEAKAYAELLEEEGI 208 (346)
Q Consensus 134 ~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~-----~~~E~~a~~~a~~~~~~ 208 (346)
.++. ..|..+. +. ......+.+.+..++..+...+.||. |.+|+.+ +..++..++ ++.+
T Consensus 100 ~v~~-~~g~~~~---------~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~~~~~~~~~~~~~~~l~---~~~~- 163 (286)
T 3dx5_A 100 KIRT-FAGQKGS---------AD-FSQQERQEYVNRIRMICELFAQHNMY-VLLETHPNTLTDTLPSTLELL---GEVD- 163 (286)
T ss_dssp EEEE-CSCSSCG---------GG-SCHHHHHHHHHHHHHHHHHHHHTTCE-EEEECCTTSTTSSHHHHHHHH---HHHC-
T ss_pred EEEE-cCCCCCc---------cc-CcHHHHHHHHHHHHHHHHHHHHhCCE-EEEecCCCcCcCCHHHHHHHH---HhcC-
Confidence 3322 2222211 00 00113455566666666666678885 5569874 455654444 4443
Q ss_pred CCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 209 TIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
...+ .+.++..-....|.++.+.++.+.
T Consensus 164 ~~~v--g~~~D~~h~~~~g~d~~~~l~~~~ 191 (286)
T 3dx5_A 164 HPNL--KINLDFLHIWESGADPVDSFQQLR 191 (286)
T ss_dssp CTTE--EEEEEHHHHHHTTCCHHHHHHHHG
T ss_pred CCCe--EEEeccccHhhcCCCHHHHHHHHH
Confidence 1223 333332222346777887777664
No 325
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=43.62 E-value=1.6e+02 Score=27.68 Aligned_cols=110 Identities=12% Similarity=0.059 Sum_probs=60.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------CHH-HH---HHHHHHHHH-hCCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NKL-EA---KAYAELLEE-EGITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~~-E~---~a~~~a~~~-~~~~~ 210 (346)
.++.+|+ .+.|.+.++...++|.|.|=+=-- | +++ .+ ..+++++++ .+..
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 3565554 556777788788899999844321 1 111 23 334555555 3433
Q ss_pred cEEEEEEEcCCC-cccCCCCHHHH---HHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEE
Q 019107 211 PAWFSFNSKDGI-NVVSGDSILEC---ASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 211 pv~is~~~~~~~-~l~~G~~~~~a---v~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (346)
||.+-++..+.. -+.++.+..++ ++.+++ .+++.|=+-..... ..+++.+++..+.|+++
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~--~~~~~~ik~~~~iPvi~ 284 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGK-RGIAFICSREREAD--DSIGPLIKEAFGGPYIV 284 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCCCT--TCCHHHHHHHHCSCEEE
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHH-hCCCEEEECCCCCC--HHHHHHHHHHCCCCEEE
Confidence 898888754321 12233334444 444444 47887766553210 13456666666788765
No 326
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=43.62 E-value=13 Score=34.69 Aligned_cols=25 Identities=28% Similarity=0.332 Sum_probs=22.1
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++....|.+.+..|-+||||+|.|.
T Consensus 294 iD~~~~v~Esl~~~kRAGAd~IiTY 318 (328)
T 1w1z_A 294 IDEDRVMMESLLCMKRAGADIIFTY 318 (328)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeee
Confidence 5667789999999999999999974
No 327
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=43.54 E-value=2e+02 Score=26.51 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=66.6
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++++.+++.+ .+
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~~-----Ls~eEr~~vi~~~ve~~------------------------~g 102 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIY-MY-----LTREERRRAIEAAATIL------------------------RG 102 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999996653 333211 11 34455566666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|.. +.++..+ +++...+.|+|.+++=+= ++.+++..-.+.+.+..
T Consensus 103 rvpViaG-vg~~------------------st~eai~----la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~ 159 (332)
T 2r8w_A 103 RRTLMAG-IGAL------------------RTDEAVA----LAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGAT 159 (332)
T ss_dssp SSEEEEE-ECCS------------------SHHHHHH----HHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEEe-cCCC------------------CHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3456677 3321 3345443 555667789999987542 46677777777666653
Q ss_pred CCCcEEE
Q 019107 208 ITIPAWF 214 (346)
Q Consensus 208 ~~~pv~i 214 (346)
++|+++
T Consensus 160 -~lPiil 165 (332)
T 2r8w_A 160 -ALPLAI 165 (332)
T ss_dssp -SSCEEE
T ss_pred -CCCEEE
Confidence 699884
No 328
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=43.43 E-value=2.4e+02 Score=27.37 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=73.9
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEc---cCC------CHHHHHHH---
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFE---TIP------NKLEAKAY--- 199 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~E---T~~------~~~E~~a~--- 199 (346)
.+.+|-|-+==+.+.+.||. + +.+++. ++++.+.+.|+|+|=+- |-| .-+|++-+
T Consensus 189 ~~~~vMGIlNvTPDSFsDgg-~--------~~~~al----~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pv 255 (442)
T 3mcm_A 189 ANTIRMGIVNLSNQSFSDGN-F--------DDNQRK----LNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEF 255 (442)
T ss_dssp CSSEEEEEEECSSCC-CCCS-S--------CCCHHH----HHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHH
T ss_pred CCceEEEEEeCCCCCCCCCC-C--------CHHHHH----HHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH
Confidence 35678887766777777764 2 223443 36677788999999654 223 34566665
Q ss_pred HHHHHHhCCC--CcEEEEEEEcCCCcccCCCCHHHHHHH-hhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 200 AELLEEEGIT--IPAWFSFNSKDGINVVSGDSILECASI-ADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 200 ~~a~~~~~~~--~pv~is~~~~~~~~l~~G~~~~~av~~-~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
++++++.... ..+.||+.. ... ++++. ++...|+ .+.||=.+-......++-+.+ ...|+++.++
T Consensus 256 I~~l~~~~~~~~~~vpISIDT---------~~~-~VaeaAL~~~aGa-~i~INDVsg~~d~~m~~v~a~-~g~~vVlMh~ 323 (442)
T 3mcm_A 256 LEYFKSQLANLIYKPLVSIDT---------RKL-EVMQKILAKHHDI-IWMINDVECNNIEQKAQLIAK-YNKKYVIIHN 323 (442)
T ss_dssp HHHHHHHTTTCSSCCEEEEEC---------CCH-HHHHHHHHHHGGG-CCEEEECCCTTHHHHHHHHHH-HTCEEEEECC
T ss_pred HHHHHhhccccCCCCeEEEeC---------CCH-HHHHHHHhhCCCC-CEEEEcCCCCCChHHHHHHHH-hCCeEEEECC
Confidence 5555541101 146677732 122 23332 3211132 233555432333344444433 3689999998
Q ss_pred CCCccccccccccccCCCC-hHHHHHHHHHHHHcCC
Q 019107 277 SGETYNAELKKWVESTGVR-DEDFVSYIGKWRDAGA 311 (346)
Q Consensus 277 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~ 311 (346)
.|...+-....+.. ...+ -..+.+.+....++|+
T Consensus 324 ~G~P~tmq~~~y~d-vv~ev~~~l~~~i~~a~~aGI 358 (442)
T 3mcm_A 324 LGITDRNQYLDKEN-AIDNVCDYIEQKKQILLKHGI 358 (442)
T ss_dssp -----------------CTHHHHHHHHHHHHHHHTC
T ss_pred CCCCccccccCccc-HHHHHHHHHHHHHHHHHHcCC
Confidence 87532110000100 0001 2346666777788898
No 329
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=43.32 E-value=1.9e+02 Score=26.16 Aligned_cols=153 Identities=13% Similarity=0.106 Sum_probs=85.7
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~-~~-----Ls~~Er~~v~~~~~~~~------------------------~g 75 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGES-AT-----LTHEEHRTCIEIAVETC------------------------KG 75 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-hh-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999996554 333211 11 34455556666555433 23
Q ss_pred -CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHh
Q 019107 132 -RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEE 206 (346)
Q Consensus 132 -~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~ 206 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+ -|+.+++..-.+.+.+.
T Consensus 76 ~rvpviaG-vg~------------------~~t~~ai~----la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 76 TKVKVLAG-AGS------------------NATHEAVG----LAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp SSCEEEEE-CCC------------------SSHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEe-CCC------------------CCHHHHHH----HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 3456777 222 13455544 55667779999998764 24677777777776665
Q ss_pred CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 207 GITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
. ++|+++==.. .++-..-+++...+..+..+++.+|=--|.....+..+++.
T Consensus 133 ~-~lPiilYn~P---~~tg~~l~~~~~~~La~~~pnivgiKdssgd~~~~~~~~~~ 184 (301)
T 3m5v_A 133 V-DIPVLLYNVP---GRTGCEISTDTIIKLFRDCENIYGVKEASGNIDKCVDLLAH 184 (301)
T ss_dssp C-SSCEEEEECH---HHHSCCCCHHHHHHHHHHCTTEEEEEECSSCHHHHHHHHHH
T ss_pred C-CCCEEEEeCc---hhhCcCCCHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHHh
Confidence 4 6999853211 12212334554544443324544444444445555555544
No 330
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=43.21 E-value=27 Score=32.00 Aligned_cols=40 Identities=25% Similarity=0.281 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 168 EFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
+--.++++++.++|+|.|++|-+|. ++++.+. ++. +.|++
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it---~~l--~iP~i 218 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVPA-ELATQIT---GKL--TIPTV 218 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHH---HHC--SSCEE
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHH---HhC--CCCEE
Confidence 4455688899999999999999984 4444333 332 37865
No 331
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=43.21 E-value=25 Score=33.10 Aligned_cols=28 Identities=7% Similarity=0.092 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhhcceeeccccccCHH
Q 019107 55 HLVRKVHLDYLDAGANIIITASYQATIQ 82 (346)
Q Consensus 55 e~V~~iH~~yl~AGA~iI~TnTy~as~~ 82 (346)
+...+.|.+..+.|+-+|+|---..++.
T Consensus 36 ~~~~~~y~~rA~gG~Glii~e~~~v~~~ 63 (363)
T 3l5l_A 36 DWHHVHLAGLARGGAGLLVVEATAVAPE 63 (363)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEESSGG
T ss_pred HHHHHHHHHHHccCceEEEecceeeCcc
Confidence 5666777778888888777644444443
No 332
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=42.90 E-value=1.8e+02 Score=27.01 Aligned_cols=99 Identities=9% Similarity=0.066 Sum_probs=59.4
Q ss_pred HHHHHHHHHHhCCCCEEEEcc----------------CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCC---
Q 019107 169 FHRRRVLILANSGADLIAFET----------------IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS--- 229 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET----------------~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~--- 229 (346)
.+.+.++.+.+.|+|.|=+-. +.+..-+..+++++++.- +.||.+-+...-+ +..+
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~----~~~~~~~ 145 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLE----GKETYRG 145 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBT----TCCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcC----ccccHHH
Confidence 455566777788999996653 224555666777777753 5898885542111 1122
Q ss_pred HHHHHHHhhcCCCceEEEECCCC------h-------hhHHHHHHHHhhhc-CCcEEE
Q 019107 230 ILECASIADSCEQVVAVGINCTS------P-------RFIHGLILSVRKVT-SKPVII 273 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~~------p-------~~~~~~l~~l~~~~-~~pl~v 273 (346)
..+.+..+.+ .++++|-|-+.. + ..-..++..+++.. +.|+++
T Consensus 146 ~~~~a~~l~~-aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia 202 (350)
T 3b0p_A 146 LAQSVEAMAE-AGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVT 202 (350)
T ss_dssp HHHHHHHHHH-TTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHH-cCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEE
Confidence 3445555555 478888776631 1 11245677777776 788765
No 333
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=42.69 E-value=1.6e+02 Score=31.52 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCCCCEEEEccC---------------CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 169 FHRRRVLILANSGADLIAFETI---------------PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET~---------------~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
.|.+.++.+.++|+|.|-+--- .+..-+..+++++++.- ++|+++-++. +.+++.+.
T Consensus 649 ~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~-------~~~~~~~~ 720 (1025)
T 1gte_A 649 DWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTP-------NVTDIVSI 720 (1025)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECS-------CSSCHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCC-------ChHHHHHH
Confidence 3555666677789999987421 24555667788888763 5999987742 33457777
Q ss_pred HHHhhcCCCceEEEE
Q 019107 234 ASIADSCEQVVAVGI 248 (346)
Q Consensus 234 v~~~~~~~~~~avGv 248 (346)
+..+.+ .++++|-+
T Consensus 721 a~~~~~-~G~d~i~v 734 (1025)
T 1gte_A 721 ARAAKE-GGADGVTA 734 (1025)
T ss_dssp HHHHHH-HTCSEEEE
T ss_pred HHHHHH-cCCCEEEE
Confidence 776655 36787776
No 334
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=42.64 E-value=13 Score=34.93 Aligned_cols=25 Identities=36% Similarity=0.493 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++....|.+.+..|.+||||+|+|.
T Consensus 305 iD~~~~v~Esl~~~kRAGAd~IiTY 329 (342)
T 1h7n_A 305 VDLKTIAFESHQGFLRAGARLIITY 329 (342)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEEee
Confidence 4667789999999999999999974
No 335
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=42.53 E-value=13 Score=34.59 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++....|.+.+..|-+||||+|.|.
T Consensus 287 iD~~~~vlEsl~~~kRAGAd~IiTY 311 (323)
T 1l6s_A 287 IDEEKVVLESLGSIKRAGADLIFSY 311 (323)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEET
T ss_pred ccHHHHHHHHHHHHHhcCCCEEeeh
Confidence 4666789999999999999999974
No 336
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=42.33 E-value=1.7e+02 Score=25.92 Aligned_cols=78 Identities=10% Similarity=-0.030 Sum_probs=48.6
Q ss_pred HHHHHHhCCCCEEEEcc---CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 173 RVLILANSGADLIAFET---IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET---~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++.+...|+|++++.. ..+..++...+.+++.. +.|+||-+. +.+..+....++ .++++|.+-
T Consensus 31 ~~e~a~~~GaD~v~lDlE~~~~~~~~~~~~~~a~~~~--~~~~~VRv~---------~~~~~~i~~~l~--~g~~~I~~P 97 (267)
T 2vws_A 31 MAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPY--ASQPVIRPV---------EGSKPLIKQVLD--IGAQTLLIP 97 (267)
T ss_dssp HHHHHHTTCCSEEEEETTTSCCCHHHHHHHHHHHTTS--SSEEEEECS---------SCCHHHHHHHHH--TTCCEEEEC
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCcEEEEeC---------CCCHHHHHHHHH--hCCCEEEeC
Confidence 34567778999999753 34455555555555433 477776652 223444444444 367888887
Q ss_pred CC-ChhhHHHHHHHH
Q 019107 250 CT-SPRFIHGLILSV 263 (346)
Q Consensus 250 C~-~p~~~~~~l~~l 263 (346)
-+ +++.+..+++.+
T Consensus 98 ~V~s~ee~~~~~~~~ 112 (267)
T 2vws_A 98 MVDTAEQARQVVSAT 112 (267)
T ss_dssp CCCSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHH
Confidence 76 678777777665
No 337
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=42.28 E-value=1.6e+02 Score=25.08 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=51.2
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEc--CCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK--DGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~--~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
+.++.+.++|++.+-+- ++.. ++.+++.. ++|++ .+... ++..+.-+.+..++-..+ . .+++.|-+.
T Consensus 40 ~~a~~~~~~G~~~i~~~---~~~~----i~~i~~~~-~~p~i-~~~~~~~~~~~~~i~~~~~~i~~~~-~-~Gad~V~l~ 108 (234)
T 1yxy_A 40 LMAKAAQEAGAVGIRAN---SVRD----IKEIQAIT-DLPII-GIIKKDYPPQEPFITATMTEVDQLA-A-LNIAVIAMD 108 (234)
T ss_dssp HHHHHHHHHTCSEEEEE---SHHH----HHHHHTTC-CSCEE-EECBCCCTTSCCCBSCSHHHHHHHH-T-TTCSEEEEE
T ss_pred HHHHHHHHCCCcEeecC---CHHH----HHHHHHhC-CCCEE-eeEcCCCCccccccCChHHHHHHHH-H-cCCCEEEEc
Confidence 45667777899998764 3433 34445533 58883 33221 133443344555444433 3 467777776
Q ss_pred CC---Ch--hhHHHHHHHHhhhc-CCcEEEee
Q 019107 250 CT---SP--RFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 250 C~---~p--~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
.. .| ..+..+++.+++.. +.++++-+
T Consensus 109 ~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 109 CTKRDRHDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred ccccCCCCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 64 24 35567777777654 45555544
No 338
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=42.27 E-value=1.1e+02 Score=27.26 Aligned_cols=89 Identities=11% Similarity=0.073 Sum_probs=53.8
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh-hcCCCceEEEECC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA-DSCEQVVAVGINC 250 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~-~~~~~~~avGvNC 250 (346)
+-++.+.++|||.+++=.+|- +|.....+++++.+ +..+.-++. -++. +-++.+ +...+. .+-+.-
T Consensus 107 ~F~~~~~~aGvdG~IipDLP~-eE~~~~~~~~~~~G--l~~I~lvaP--------~t~~-eRi~~ia~~a~gF-iY~Vs~ 173 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPELSF-EESDDLIKECERYN--IALITLVSV--------TTPK-ERVKKLVKHAKGF-IYLLAS 173 (252)
T ss_dssp HHHHHHHHTTEEEEECTTCCG-GGCHHHHHHHHHTT--CEECEEEET--------TSCH-HHHHHHHTTCCSC-EEEECC
T ss_pred HHHHHHHHcCCCEEEeCCCCH-HHHHHHHHHHHHcC--CeEEEEeCC--------CCcH-HHHHHHHHhCCCe-EEEEec
Confidence 345567789999999887764 57788888889887 543322221 1222 333333 332333 222332
Q ss_pred ---CC-----hhhHHHHHHHHhhhcCCcEEE
Q 019107 251 ---TS-----PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ---~~-----p~~~~~~l~~l~~~~~~pl~v 273 (346)
++ ++.+..+++++++.++.|+++
T Consensus 174 ~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 174 IGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 22 244677888998888889876
No 339
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=42.22 E-value=29 Score=31.95 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=33.4
Q ss_pred HHHHHhCCCCEEEEccCC-CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 174 VLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
++.+.+.|+|.+ .++-. .+.| .++.+++...+.++++.. .++.++.+.+.. +++.|++|=
T Consensus 93 ~qil~aaGAD~I-d~s~~~~~~~---li~~i~~~~~g~~vvv~v-----------~~~~Ea~~a~~~--Gad~I~v~g 153 (297)
T 4adt_A 93 AQILEELKVDML-DESEVLTMAD---EYNHINKHKFKTPFVCGC-----------TNLGEALRRISE--GASMIRTKG 153 (297)
T ss_dssp HHHHHHTTCSEE-EEETTSCCSC---SSCCCCGGGCSSCEEEEE-----------SSHHHHHHHHHH--TCSEEEECC
T ss_pred HHHHHHcCCCEE-EcCCCCCHHH---HHHHHHhcCCCCeEEEEe-----------CCHHHHHHHHhC--CCCEEEECC
Confidence 445557999999 33211 1111 222333322257888744 245677666643 678999983
No 340
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=41.91 E-value=1.6e+02 Score=27.62 Aligned_cols=108 Identities=7% Similarity=0.003 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC----------C-----------CHH-H---HHHHHHHHHH-hCCCCcEEEE
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI----------P-----------NKL-E---AKAYAELLEE-EGITIPAWFS 215 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~~-E---~~a~~~a~~~-~~~~~pv~is 215 (346)
+.+++.+.|.+.++...++|.|.|=+=-- | +++ . +..+++++++ .+.+ ||.+-
T Consensus 155 eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~-~v~vR 233 (361)
T 3gka_A 155 EIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA-RVGVH 233 (361)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-GEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-eEEEe
Confidence 45667778888888888999999844321 1 111 2 3345555555 3433 89888
Q ss_pred EEEcCCC-cccCCCCHHHH---HHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEE
Q 019107 216 FNSKDGI-NVVSGDSILEC---ASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 216 ~~~~~~~-~l~~G~~~~~a---v~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (346)
++..+.. -+.++.+..++ ++.+++ .+++.|=+-..... ..+++.+++..+.|+++
T Consensus 234 ls~~~~~~g~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~--~~~~~~ik~~~~iPvi~ 292 (361)
T 3gka_A 234 LAPRGDAHTMGDSDPAATFGHVARELGR-RRIAFLFARESFGG--DAIGQQLKAAFGGPFIV 292 (361)
T ss_dssp ECTTCCSSSCCCSCHHHHHHHHHHHHHH-TTCSEEEEECCCST--TCCHHHHHHHHCSCEEE
T ss_pred cccccccCCCCCCCcHHHHHHHHHHHHH-cCCCEEEECCCCCC--HHHHHHHHHHcCCCEEE
Confidence 8754321 12233444444 444444 47887766553210 13456666666788765
No 341
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=41.44 E-value=2.3e+02 Score=26.57 Aligned_cols=157 Identities=15% Similarity=0.102 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHHHhhcceeecccccc----CHHh---------------HHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 019107 52 SSPHLVRKVHLDYLDAGANIIITASYQA----TIQG---------------FEAKGFSTEEAEALLRRSVEIACEAREIY 112 (346)
Q Consensus 52 ~~Pe~V~~iH~~yl~AGA~iI~TnTy~a----s~~~---------------l~~~g~~~~~~~~l~~~av~lA~~A~~~~ 112 (346)
.+.|...++-+.-.+||||+|.-=||.. ++.. +...+++.+..+.|.+.+-+.
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~-------- 103 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK-------- 103 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--------
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--------
Q ss_pred hhhccCCCCCCCCCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCC
Q 019107 113 YDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETIPN 192 (346)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~ 192 (346)
.+.+.-++ |-.+.++.|.+-+||++=+-+. +
T Consensus 104 --------------------Gi~~~st~----------------------------~d~~svd~l~~~~v~~~KI~S~-~ 134 (349)
T 2wqp_A 104 --------------------GMIFISTL----------------------------FSRAAALRLQRMDIPAYKIGSG-E 134 (349)
T ss_dssp --------------------TCEEEEEE----------------------------CSHHHHHHHHHHTCSCEEECGG-G
T ss_pred --------------------CCeEEEee----------------------------CCHHHHHHHHhcCCCEEEECcc-c
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCC--h----hhHHHHHHHHhhh
Q 019107 193 KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTS--P----RFIHGLILSVRKV 266 (346)
Q Consensus 193 ~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~--p----~~~~~~l~~l~~~ 266 (346)
+.. ...++.+.+++ +||++|- |.- +=+.+..|++.+..... ..+.+-|+. | +.=+..+..|++.
T Consensus 135 ~~n-~~LL~~va~~g--kPviLst-----Gma-t~~Ei~~Ave~i~~~G~-~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~ 204 (349)
T 2wqp_A 135 CNN-YPLIKLVASFG--KPIILST-----GMN-SIESIKKSVEIIREAGV-PYALLHCTNIYPTPYEDVRLGGMNDLSEA 204 (349)
T ss_dssp TTC-HHHHHHHHTTC--SCEEEEC-----TTC-CHHHHHHHHHHHHHHTC-CEEEEECCCCSSCCGGGCCTHHHHHHHHH
T ss_pred ccC-HHHHHHHHhcC--CeEEEEC-----CCC-CHHHHHHHHHHHHHcCC-CEEEEeccCCCCCChhhcCHHHHHHHHHH
Q ss_pred c-CCcEEEeeC
Q 019107 267 T-SKPVIIYPN 276 (346)
Q Consensus 267 ~-~~pl~vypN 276 (346)
+ ..|+ .||.
T Consensus 205 f~~lpV-g~sd 214 (349)
T 2wqp_A 205 FPDAII-GLSD 214 (349)
T ss_dssp CTTSEE-EEEC
T ss_pred CCCCCE-EeCC
No 342
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=41.10 E-value=15 Score=34.64 Aligned_cols=25 Identities=28% Similarity=0.325 Sum_probs=21.9
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++....|.+.+..|.+||||+|.|.
T Consensus 308 iD~~~~v~Esl~~~kRAGAd~IiTY 332 (356)
T 3obk_A 308 ISEKDTVLEVLKSFRRAGADAVATY 332 (356)
T ss_dssp SCHHHHHHHHHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHHHHHHHcCCCEEehh
Confidence 4666789999999999999999974
No 343
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=40.97 E-value=51 Score=25.25 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=32.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHh
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEE 206 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~ 206 (346)
+.+++...--..++.|-+.++|.|++|.+|.-....++..-+++.
T Consensus 53 ~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kA 97 (105)
T 2yv4_A 53 SVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKA 97 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHh
Confidence 667766655567778888999999999999877777776666554
No 344
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=40.63 E-value=55 Score=30.48 Aligned_cols=50 Identities=14% Similarity=-0.059 Sum_probs=34.6
Q ss_pred HHHHHHHhCCCCEEEEccCCC---HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc
Q 019107 172 RRVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSFNSKDGIN 223 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~---~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~ 223 (346)
+.++.+.+.|++.|++|++.. ..++..+++.+.+.+ +||+++-.|.....
T Consensus 233 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~G--i~VV~~Sr~~~G~v 285 (332)
T 2wlt_A 233 DLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMG--VVIVRSSRVGSGGV 285 (332)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTT--CEEEEEESSSSSCC
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCC--CEEEEECCCCCCCc
Confidence 356677788999999998864 245555555455544 99998887765543
No 345
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=40.08 E-value=1.5e+02 Score=28.47 Aligned_cols=70 Identities=14% Similarity=0.160 Sum_probs=42.9
Q ss_pred hCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC-----------CCcccCCCC-----HHHHHHHhhcCCC
Q 019107 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-----------GINVVSGDS-----ILECASIADSCEQ 242 (346)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~-----------~~~l~~G~~-----~~~av~~~~~~~~ 242 (346)
+.|++.+ ++-+..|++.+.+++++.+...+|++-+...- ...-+-|-+ +.++++.+.+..+
T Consensus 130 ~~gv~~i---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~~~srfG~~~~~~e~~~~~~~~~~~~~ 206 (467)
T 2o0t_A 130 KAGVGHI---VVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDH 206 (467)
T ss_dssp HHTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHHHHHHCSS
T ss_pred HCCCCEE---EECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCCCCCCcCCcCCHHHHHHHHHHHHhCCC
Confidence 3578755 56678888888887777664567777775420 001234543 4455555555456
Q ss_pred ceEEEECCC
Q 019107 243 VVAVGINCT 251 (346)
Q Consensus 243 ~~avGvNC~ 251 (346)
+...|+-|.
T Consensus 207 l~l~Gl~~H 215 (467)
T 2o0t_A 207 LRLVGLHSH 215 (467)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEEE
Confidence 777888875
No 346
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=39.91 E-value=1.9e+02 Score=25.25 Aligned_cols=141 Identities=11% Similarity=0.049 Sum_probs=71.9
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCC---HHHHHHHhhcCCCceEE-
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDS---ILECASIADSCEQVVAV- 246 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~---~~~av~~~~~~~~~~av- 246 (346)
..++...+.|+|.++.+ + ..++.+++ ...+.|+++.|.-.... ..+..+ +.++-..++ .|++.|
T Consensus 49 ~~~~~~~~~g~~~i~~~--~------~~~~~~~~~~~~~~~~~v~~~~~~~~-~~d~~~~~~~~~v~~a~~--~Ga~~v~ 117 (273)
T 2qjg_A 49 KTVNDVAEGGANAVLLH--K------GIVRHGHRGYGKDVGLIIHLSGGTAI-SPNPLKKVIVTTVEEAIR--MGADAVS 117 (273)
T ss_dssp HHHHHHHHHTCSEEEEC--H------HHHHSCCCSSSCCCEEEEECEECCTT-SSSTTCCEECSCHHHHHH--TTCSEEE
T ss_pred HHHHHHHhcCCCEEEeC--H------HHHHHHHHhhcCCCCEEEEEcCCCcC-CCCcccchHHHHHHHHHH--cCCCEEE
Confidence 34566667899999753 1 22222222 22257898888643211 111211 233333333 367777
Q ss_pred -EECCC--ChhhHHHHHHHHhhh---cCCcEEEeeCC-CCccccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCC
Q 019107 247 -GINCT--SPRFIHGLILSVRKV---TSKPVIIYPNS-GETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCR 319 (346)
Q Consensus 247 -GvNC~--~p~~~~~~l~~l~~~---~~~pl~vypN~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCG 319 (346)
-+|.. ..+.+...++.+.+. ...|+++.-.. |. .. ....+++...+.++...+.|+.+|+=.-.
T Consensus 118 ~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~--------~l-~~~~~~~~~~~~a~~a~~~Gad~i~~~~~ 188 (273)
T 2qjg_A 118 IHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGK--------HI-QNERDPELVAHAARLGAELGADIVKTSYT 188 (273)
T ss_dssp EEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECST--------TC-SCTTCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCc--------cc-CCCCCHhHHHHHHHHHHHcCCCEEEECCC
Confidence 66554 333333334433332 36777664211 11 01 11234555555556677889888874334
Q ss_pred CchHHHHHHHHHH
Q 019107 320 TTPNTIKAISRVL 332 (346)
Q Consensus 320 t~P~hI~al~~~~ 332 (346)
.+++.++++++.+
T Consensus 189 ~~~~~l~~i~~~~ 201 (273)
T 2qjg_A 189 GDIDSFRDVVKGC 201 (273)
T ss_dssp SSHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhC
Confidence 5777777777654
No 347
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=39.89 E-value=49 Score=31.54 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=24.7
Q ss_pred CCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHH
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~ 94 (346)
+++|+-.+.+++ |-+.|||+++| |+ +..+.+.|++.+.+
T Consensus 82 Lk~~~Gr~~l~~--Lv~~ADV~ien-fr--Pg~~~rlGl~ye~L 120 (385)
T 4ed9_A 82 FRTEEGRELVRR--LVAEADVVIEN-FK--LGGLDKYGLDYESL 120 (385)
T ss_dssp TTSHHHHHHHHH--HHHTCSEEEEC-CC--TTTTGGGTCSHHHH
T ss_pred CCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 355654433332 34569999999 55 55577789986543
No 348
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=39.89 E-value=48 Score=29.91 Aligned_cols=17 Identities=18% Similarity=0.159 Sum_probs=12.9
Q ss_pred HHHHHHHHhhcceeecc
Q 019107 59 KVHLDYLDAGANIIITA 75 (346)
Q Consensus 59 ~iH~~yl~AGA~iI~Tn 75 (346)
++-+.|.++||+.|.-+
T Consensus 32 ~~a~~~~~~Ga~~i~~~ 48 (297)
T 2zbt_A 32 EQAVIAEEAGAVAVMAL 48 (297)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHCCCcEEEec
Confidence 45566889999998754
No 349
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=39.75 E-value=66 Score=31.41 Aligned_cols=39 Identities=18% Similarity=0.187 Sum_probs=25.3
Q ss_pred CCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHH
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~ 94 (346)
++.|+-.+.+++ |-+.|||+++| |+ +..+.+.|++.+.+
T Consensus 100 Lk~~eGr~~l~~--Li~~ADVvven-fR--PG~~erlGL~ye~L 138 (456)
T 3ubm_A 100 TKTPEGKAVFEK--CIKWADILLEN-FR--PGAMERMGFTWEYL 138 (456)
T ss_dssp TTSHHHHHHHHH--HHHHCSEEEEC-CS--TTHHHHTTCCHHHH
T ss_pred CCCHHHHHHHHH--HHHhCCEEEEC-CC--ccHHHHhCCCHHHH
Confidence 455654433332 34469999999 66 56688889986544
No 350
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=39.71 E-value=1.1e+02 Score=26.11 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=47.5
Q ss_pred HHHHHHHHhCCCCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceE
Q 019107 171 RRRVLILANSGADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVA 245 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~a 245 (346)
.+.++.+.+.|+|++=+- .+++.......++.+++.. +.|+.+-+.+.+ ..+.++.+.. .++++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~-~~~~~v~l~vnd---------~~~~v~~~~~-~Gad~ 94 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT-DLPLDVHLMIVE---------PDQRVPDFIK-AGADI 94 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC-CSCEEEEEESSS---------HHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc-CCcEEEEEEecC---------HHHHHHHHHH-cCCCE
Confidence 346777888999988553 2344322223444455542 478888876543 2344444433 46777
Q ss_pred EEECCC--ChhhHHHHHHHHhh
Q 019107 246 VGINCT--SPRFIHGLILSVRK 265 (346)
Q Consensus 246 vGvNC~--~p~~~~~~l~~l~~ 265 (346)
|-+-+. .++....+++.+++
T Consensus 95 v~vh~~~~~~~~~~~~~~~~~~ 116 (230)
T 1rpx_A 95 VSVHCEQSSTIHLHRTINQIKS 116 (230)
T ss_dssp EEEECSTTTCSCHHHHHHHHHH
T ss_pred EEEEecCccchhHHHHHHHHHH
Confidence 766665 44444556666554
No 351
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=39.62 E-value=44 Score=31.62 Aligned_cols=17 Identities=18% Similarity=-0.048 Sum_probs=13.3
Q ss_pred HHHHHH-hCCCCEEEEcc
Q 019107 173 RVLILA-NSGADLIAFET 189 (346)
Q Consensus 173 ~i~~l~-~~gvD~i~~ET 189 (346)
.+..|. +.+||.|.+|.
T Consensus 256 i~~~l~~~~~~d~i~lE~ 273 (375)
T 1ypx_A 256 VAETLFGKLNIDGFFLEY 273 (375)
T ss_dssp GGHHHHTTCCCSEEEEEC
T ss_pred HHHHHHhhCCCCEEEEEe
Confidence 345666 89999999994
No 352
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=39.51 E-value=2e+02 Score=25.45 Aligned_cols=78 Identities=13% Similarity=0.091 Sum_probs=51.7
Q ss_pred HHHHHHhCCCCEEEEc---cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 173 RVLILANSGADLIAFE---TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E---T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++.+...|+|++++. .......+...+.+++..+ .++||-+.. . +..++...++ .++++|.+-
T Consensus 29 ~~e~a~~~g~D~vilDlEhav~~~~k~~~~l~a~~~~~--~~~~VRVn~--------~-~~~di~~~ld--~G~~gI~lP 95 (261)
T 3qz6_A 29 IVRIYAEAGLDYFIVDCEHAAYTFREINHLVSVAKNAG--VSVLVRIPQ--------V-DRAHVQRLLD--IGAEGFMIP 95 (261)
T ss_dssp HHHHHHHTTCSEEEEESSSSCCCHHHHHHHHHHHHHHT--CEEEEECSS--------C-CHHHHHHHHH--HTCCEEEET
T ss_pred HHHHHhcCCcCEEEEeccCCCCCHHHHHHHHHHHhhcC--CeEEEEeCC--------C-CHHHHHHHHh--cCCCEEEEC
Confidence 3556667899999964 5666777777777766554 677765521 1 1234444444 368899998
Q ss_pred CC-ChhhHHHHHHHH
Q 019107 250 CT-SPRFIHGLILSV 263 (346)
Q Consensus 250 C~-~p~~~~~~l~~l 263 (346)
-+ +++.+..+.+.+
T Consensus 96 ~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 96 GVQSAETMRETVRLA 110 (261)
T ss_dssp TCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHh
Confidence 76 688888777765
No 353
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=39.32 E-value=1.1e+02 Score=22.69 Aligned_cols=73 Identities=10% Similarity=0.018 Sum_probs=34.8
Q ss_pred CCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHH
Q 019107 180 SGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHG 258 (346)
Q Consensus 180 ~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~ 258 (346)
...|+++++.. +.. ....+++.+++.....|+++ ++- -.+.......+. .+++.+-.-=..++.+..
T Consensus 50 ~~~dlvi~d~~l~~~-~g~~~~~~l~~~~~~~~ii~-~s~--------~~~~~~~~~~~~--~g~~~~l~kP~~~~~l~~ 117 (137)
T 3hdg_A 50 HAPDVIITDIRMPKL-GGLEMLDRIKAGGAKPYVIV-ISA--------FSEMKYFIKAIE--LGVHLFLPKPIEPGRLME 117 (137)
T ss_dssp HCCSEEEECSSCSSS-CHHHHHHHHHHTTCCCEEEE-CCC--------CCCHHHHHHHHH--HCCSEECCSSCCHHHHHH
T ss_pred cCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCcEEE-Eec--------CcChHHHHHHHh--CCcceeEcCCCCHHHHHH
Confidence 45788888743 433 33444555665543456543 211 122233333333 245555443334555555
Q ss_pred HHHHHh
Q 019107 259 LILSVR 264 (346)
Q Consensus 259 ~l~~l~ 264 (346)
.++.+.
T Consensus 118 ~i~~~~ 123 (137)
T 3hdg_A 118 TLEDFR 123 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 354
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=39.20 E-value=1.3e+02 Score=27.83 Aligned_cols=57 Identities=21% Similarity=0.288 Sum_probs=33.7
Q ss_pred CCcEEEEEEEcCCCcccCCCCHHHHHHH---hhc--CCCceEEEECCCCh------------hhHHHHHHHHhhhcCCcE
Q 019107 209 TIPAWFSFNSKDGINVVSGDSILECASI---ADS--CEQVVAVGINCTSP------------RFIHGLILSVRKVTSKPV 271 (346)
Q Consensus 209 ~~pv~is~~~~~~~~l~~G~~~~~av~~---~~~--~~~~~avGvNC~~p------------~~~~~~l~~l~~~~~~pl 271 (346)
.+|+++++ .|.++.+.++. +.. ...++++=+|+++| +.+..+++.+++....|+
T Consensus 126 ~~pvivsi---------~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv 196 (354)
T 3tjx_A 126 KKPLFLSM---------SGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSF 196 (354)
T ss_dssp TCCEEEEE---------CCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCE
T ss_pred CceEEEEE---------ecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhccc
Confidence 58999998 34444433332 211 12467788888654 344566667777778887
Q ss_pred EEe
Q 019107 272 IIY 274 (346)
Q Consensus 272 ~vy 274 (346)
.+.
T Consensus 197 ~vK 199 (354)
T 3tjx_A 197 GVK 199 (354)
T ss_dssp EEE
T ss_pred ccc
Confidence 764
No 355
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=39.19 E-value=60 Score=30.01 Aligned_cols=51 Identities=22% Similarity=0.182 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhCC--CCEEEEc-----cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 167 KEFHRRRVLILANSG--ADLIAFE-----TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 167 ~~~~~~~i~~l~~~g--vD~i~~E-----T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
.+.+.+.++.+.+.| +|.|=+. ..|++.+++.+++.+.+.| +||||| +.+.
T Consensus 187 ~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi~ 245 (331)
T 1n82_A 187 REKIFALVKSLRDKGIPIHGIGMQAHWSLTRPSLDEIRAAIERYASLG--VVLHITELDVS 245 (331)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTT--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCccceEEeceecCCCCCCHHHHHHHHHHHHhcC--CeEEEEeceec
Confidence 345556788787777 5998664 3478899999999888766 999998 4443
No 356
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=38.89 E-value=23 Score=26.56 Aligned_cols=45 Identities=24% Similarity=0.547 Sum_probs=29.7
Q ss_pred hhHHHHHHHHhhhcCCc----EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHH-cCC
Q 019107 254 RFIHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD-AGA 311 (346)
Q Consensus 254 ~~~~~~l~~l~~~~~~p----l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 311 (346)
+....+|..+.+.+.-| |+.||+.+. ..+|+..++.+++|+. .|-
T Consensus 31 ~e~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~~G~ 80 (86)
T 1fr2_A 31 EELVKLVTHFAEMTEHPSGSDLIYYPKEGD-------------DDSPSGIVNTVKQWRAANGK 80 (86)
T ss_dssp HHHHHHHHHHHHHHCCTTTTHHHHSCCTTC-------------CCSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHHcCC
Confidence 33456666666554434 677777642 1569999999999985 453
No 357
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=38.87 E-value=2.1e+02 Score=25.55 Aligned_cols=96 Identities=10% Similarity=0.055 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCCC----HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIPN----KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~----~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
.+++.+ +++.+.+.|+|+|=+-.-++ ++.+..+++++++.. +.|+ |+ |.....-+-..++
T Consensus 33 ~~~a~~----~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~-~~pi--sI---------DT~~~~v~~aal~ 96 (271)
T 2yci_X 33 PRPIQE----WARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVV-DLPC--CL---------DSTNPDAIEAGLK 96 (271)
T ss_dssp CHHHHH----HHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHC-CCCE--EE---------ECSCHHHHHHHHH
T ss_pred HHHHHH----HHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhC-CCeE--EE---------eCCCHHHHHHHHH
Confidence 355555 44556679999997766553 445666667776642 3564 44 2223332222233
Q ss_pred cCCCceEEE-ECCCChhhHHHHHHHHhhhcCCcEEEeeC
Q 019107 239 SCEQVVAVG-INCTSPRFIHGLILSVRKVTSKPVIIYPN 276 (346)
Q Consensus 239 ~~~~~~avG-vNC~~p~~~~~~l~~l~~~~~~pl~vypN 276 (346)
...+..-|- +|-.. +.+...++...++ +.|+++.+.
T Consensus 97 a~~Ga~iINdvs~~~-d~~~~~~~~~a~~-~~~vv~m~~ 133 (271)
T 2yci_X 97 VHRGHAMINSTSADQ-WKMDIFFPMAKKY-EAAIIGLTM 133 (271)
T ss_dssp HCCSCCEEEEECSCH-HHHHHHHHHHHHH-TCEEEEESC
T ss_pred hCCCCCEEEECCCCc-cccHHHHHHHHHc-CCCEEEEec
Confidence 322433332 44442 3334444444433 678888886
No 358
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=38.75 E-value=2.4e+02 Score=26.00 Aligned_cols=151 Identities=15% Similarity=0.098 Sum_probs=83.4
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEcc-----CC-----------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcc
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFET-----IP-----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINV 224 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET-----~~-----------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l 224 (346)
++.++..+ .++.|.+.|+|.| |- +| +..| .++.+++...+.|+. .+.....+
T Consensus 27 ~~~e~k~~----i~~~L~~~Gvd~I--EvG~~~g~p~ssp~~g~~~~~~~e---~l~~i~~~~~~~~i~-~l~~p~~~-- 94 (345)
T 1nvm_A 27 YTLDDVRA----IARALDKAKVDSI--EVAHGDGLQGSSFNYGFGRHTDLE---YIEAVAGEISHAQIA-TLLLPGIG-- 94 (345)
T ss_dssp CCHHHHHH----HHHHHHHHTCSEE--ECSCTTSTTCCBTTTBCCSSCHHH---HHHHHHTTCSSSEEE-EEECBTTB--
T ss_pred CCHHHHHH----HHHHHHHcCCCEE--EEecCCCCCCCCCcccCCCCCHHH---HHHHHHhhCCCCEEE-EEecCCcc--
Confidence 57777666 4556777899988 55 22 3333 344444432234443 33222111
Q ss_pred cCCCCHHHHHHHhhcCCCceEEEE--CCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHH
Q 019107 225 VSGDSILECASIADSCEQVVAVGI--NCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSY 302 (346)
Q Consensus 225 ~~G~~~~~av~~~~~~~~~~avGv--NC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~ 302 (346)
..+-++.+.+ .+++.+-| .|+..+.+...++..++. ...+.+++-.. ...+++.+.+.
T Consensus 95 -----~~~~i~~a~~-aGvd~v~I~~~~s~~~~~~~~i~~ak~~-G~~v~~~~~~a-------------~~~~~e~~~~i 154 (345)
T 1nvm_A 95 -----SVHDLKNAYQ-AGARVVRVATHCTEADVSKQHIEYARNL-GMDTVGFLMMS-------------HMIPAEKLAEQ 154 (345)
T ss_dssp -----CHHHHHHHHH-HTCCEEEEEEETTCGGGGHHHHHHHHHH-TCEEEEEEEST-------------TSSCHHHHHHH
T ss_pred -----cHHHHHHHHh-CCcCEEEEEEeccHHHHHHHHHHHHHHC-CCEEEEEEEeC-------------CCCCHHHHHHH
Confidence 1223333322 25555444 344456777777776654 34444443110 11357888889
Q ss_pred HHHHHHcCCeEEeec--CC-CchHHHHHHHHHHcCCCCCCcccc
Q 019107 303 IGKWRDAGASLFGGC--CR-TTPNTIKAISRVLSNKSLPSANLN 343 (346)
Q Consensus 303 ~~~~~~~G~~ivGGC--CG-t~P~hI~al~~~~~~~~~~~~~~~ 343 (346)
++...+.|+.+|.=| -| .+|..++.+-+.++...+++.++.
T Consensus 155 a~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~ 198 (345)
T 1nvm_A 155 GKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVG 198 (345)
T ss_dssp HHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEE
T ss_pred HHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEE
Confidence 999999998886533 22 369999888888876554444543
No 359
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=38.47 E-value=52 Score=30.98 Aligned_cols=147 Identities=8% Similarity=-0.009 Sum_probs=75.6
Q ss_pred HHHHHHHhCCCCEE-----EEccCCC--HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCce
Q 019107 172 RRVLILANSGADLI-----AFETIPN--KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV 244 (346)
Q Consensus 172 ~~i~~l~~~gvD~i-----~~ET~~~--~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~ 244 (346)
..++.+. ..|+++ +||.... +..++.+++.+++.+ .+|+.=+-+.|=+. +...+++.+-...+++
T Consensus 108 ~lvd~l~-~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g--~~VflDlK~~DIpn-----Tv~~ya~~~~~~lgaD 179 (342)
T 3n3m_A 108 YIINETN-KYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELN--IPTILDMKINDIGN-----TVKNYRKFIFEYLKSD 179 (342)
T ss_dssp HHHHHHG-GGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHT--CCEEEEEEECCCHH-----HHHHHHHHHHTTSCCS
T ss_pred HHHHHhc-CcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCC--CeEEEEeecCCcHH-----HHHHHHHHHHHhcCCC
Confidence 4556554 345555 2333321 234445556666655 89998887655443 3444555442235799
Q ss_pred EEEECCC-ChhhHHHHH-HHHhhhcCCcEE--EeeCCCCccccccccccccC--CCCh--HHHHHHHHHHHH-----cCC
Q 019107 245 AVGINCT-SPRFIHGLI-LSVRKVTSKPVI--IYPNSGETYNAELKKWVEST--GVRD--EDFVSYIGKWRD-----AGA 311 (346)
Q Consensus 245 avGvNC~-~p~~~~~~l-~~l~~~~~~pl~--vypN~g~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~-----~G~ 311 (346)
++-|+.. +++.+.+++ +...+....-++ +.-|.+. .++.... .-++ +..++.+.+|.. .+.
T Consensus 180 ~vTVh~~~G~~~l~~a~~~~~~~~~~~v~vvt~tSs~~~------~dlq~~~~~~~~~ly~~V~~~a~~~a~~~~~a~~~ 253 (342)
T 3n3m_A 180 SCTVNIYMGTNMLKDICYDEEKNKYYSAFVLVKTTNPDS------AIFQKNLSLDNKQAYVIMAQEALNMSSYLNLEQNN 253 (342)
T ss_dssp EEEECCTTCSGGGGGTSEETTTTEECEEEEEEECCSTTT------HHHHTTCEETTEEHHHHHHHHHHHHHHHTTTGGGT
T ss_pred EEEEcccCCHHHHHHHHHHHHhhcCCcEEEEEeCCCCCH------HHHHHHhccCCChHHHHHHHHHHHHHHhccccccc
Confidence 9999997 566666543 222211111122 2233331 1111100 0111 335667777751 123
Q ss_pred eEEeecCCC-chHHHHHHHHHH
Q 019107 312 SLFGGCCRT-TPNTIKAISRVL 332 (346)
Q Consensus 312 ~ivGGCCGt-~P~hI~al~~~~ 332 (346)
...|==||. .|+.++.|++.+
T Consensus 254 G~~GvV~GATsp~e~~~iR~~~ 275 (342)
T 3n3m_A 254 EFIGFVVGANSYDEMNYIRTYF 275 (342)
T ss_dssp CCEEEEECTTCHHHHHHHHHHS
T ss_pred CCceEEECCCCHHHHHHHHHhC
Confidence 346666654 599999998876
No 360
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=38.20 E-value=95 Score=27.83 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=27.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEc
Q 019107 156 DYGDAVSLETLKEFHRRRVLILANSGADLIAFE 188 (346)
Q Consensus 156 ~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~E 188 (346)
+|+. -+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 45 PYG~-~~~~~i~~~~~~~~~~L~~~g~~~iVIA 76 (268)
T 3out_A 45 PYGT-KSRATIQKFAAQTAKFLIDQEVKAIIIA 76 (268)
T ss_dssp CCTT-SCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4443 4889999999999999999999999864
No 361
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=38.14 E-value=1.2e+02 Score=28.04 Aligned_cols=96 Identities=17% Similarity=0.057 Sum_probs=59.4
Q ss_pred HHHHHhCCCCEEEEcc-CC--------------CHHHHHHHHHHHHHhCCCCcEEEEEEEcC---CCcccCCCCHHHHHH
Q 019107 174 VLILANSGADLIAFET-IP--------------NKLEAKAYAELLEEEGITIPAWFSFNSKD---GINVVSGDSILECAS 235 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET-~~--------------~~~E~~a~~~a~~~~~~~~pv~is~~~~~---~~~l~~G~~~~~av~ 235 (346)
++...++|+|.+-+=. .+ +++.++.+++.+++.+ +.|.++ +.+ .++. +-+-+.+.++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G--~~v~~~--~~~~~~~~~~-~~~~~~~~~~ 176 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSG--LKINVY--LEDWSNGFRN-SPDYVKSLVE 176 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTT--CEEEEE--EETHHHHHHH-CHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC--CEEEEE--EEECCCCCcC-CHHHHHHHHH
Confidence 5556668999886543 22 1356667778888877 555544 433 2211 1122334455
Q ss_pred HhhcCCCceEEEECCC----ChhhHHHHHHHHhhhc-CCcEEEee
Q 019107 236 IADSCEQVVAVGINCT----SPRFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 236 ~~~~~~~~~avGvNC~----~p~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
.+.+ .+++.|.+-=+ .|..+..+++.+++.. +.|+.+..
T Consensus 177 ~~~~-~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~ 220 (337)
T 3ble_A 177 HLSK-EHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHG 220 (337)
T ss_dssp HHHT-SCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred HHHH-cCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 4444 57777766433 4999999999998876 67888775
No 362
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=38.12 E-value=2.5e+02 Score=26.17 Aligned_cols=147 Identities=10% Similarity=-0.013 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
+.+++. ++++.+.+.|.|.+=+-.- +++.+...+++++++. +.+.++.+-. ..|.++.++++.++.
T Consensus 162 ~~e~~~----~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~avg~d~~l~vDa--------n~~~~~~~a~~~~~~ 229 (393)
T 2og9_A 162 PIDQLM----VNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHLGDAVPLMVDA--------NQQWDRPTAQRMCRI 229 (393)
T ss_dssp CHHHHH----HHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHHCTTSCEEEEC--------TTCCCHHHHHHHHHH
T ss_pred CHHHHH----HHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEEC--------CCCCCHHHHHHHHHH
Confidence 455543 3555566788887754321 3677778888888884 6567776532 256788888776643
Q ss_pred C--CCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccc-cccccccC-----CCCh------HHHHHHHHH
Q 019107 240 C--EQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE-LKKWVEST-----GVRD------EDFVSYIGK 305 (346)
Q Consensus 240 ~--~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~-~~~~~~~~-----~~~~------~~~~~~~~~ 305 (346)
. .+++.|==-| .++. ...+..+++..+.|+++-=+ +++.. ........ .+.+ .+..+.+..
T Consensus 230 l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~iPIa~dE~---~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~ 304 (393)
T 2og9_A 230 FEPFNLVWIEEPL-DAYD-HEGHAALALQFDTPIATGEM---LTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASL 304 (393)
T ss_dssp HGGGCCSCEECCS-CTTC-HHHHHHHHHHCSSCEEECTT---CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHH
T ss_pred HHhhCCCEEECCC-Cccc-HHHHHHHHHhCCCCEEeCCC---cCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHH
Confidence 2 2344332112 2233 34556667677889876322 12111 01111110 1122 233444555
Q ss_pred HHHcCCeEEeecCCCchHHH
Q 019107 306 WRDAGASLFGGCCRTTPNTI 325 (346)
Q Consensus 306 ~~~~G~~ivGGCCGt~P~hI 325 (346)
....|+.+..+||+...-|+
T Consensus 305 A~~~gi~~~~h~~~~~~~~l 324 (393)
T 2og9_A 305 AEHAGLMLAPHFAMELHVHL 324 (393)
T ss_dssp HHHTTCEECCCSCHHHHHHH
T ss_pred HHHcCCEEeccCccHHHHHH
Confidence 56789999989887654444
No 363
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=38.10 E-value=1.6e+02 Score=27.36 Aligned_cols=114 Identities=9% Similarity=0.031 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCC-------CCHHHHHHHhhcCCCceEEEECCCChhhHHH------
Q 019107 192 NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSG-------DSILECASIADSCEQVVAVGINCTSPRFIHG------ 258 (346)
Q Consensus 192 ~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G-------~~~~~av~~~~~~~~~~avGvNC~~p~~~~~------ 258 (346)
|+...+.+++.+++.+ ++|---+-.-+-..|| ++++++.+.++. ++++++=+.-...+-+.+
T Consensus 114 Ni~~Tk~vv~~ah~~g----vsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~-TgvD~LAvaiGt~HG~Yk~~~~p~ 188 (323)
T 2isw_A 114 NVRITKEVVAYAHARS----VSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVEL-TGVDALAVAIGTSHGAYKFKSESD 188 (323)
T ss_dssp HHHHHHHHHHHHHTTT----CEEEEEESCC----------CCCCCHHHHHHHHHH-HCCSEEEECSSCCSSSBCCCC---
T ss_pred HHHHHHHHHHHHHHcC----CeEEEEeCCccCCccCcccccccCCHHHHHHHHHH-HCCCEEEEecCccccccCCCCCcc
Q ss_pred ------HHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEEeecCCCchHHHHHHHH
Q 019107 259 ------LILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISR 330 (346)
Q Consensus 259 ------~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ivGGCCGt~P~hI~al~~ 330 (346)
.|+.+++..+.||++.--++. |++|.+. .-+.|..+ ++.-|+..+.|++-.+
T Consensus 189 ~~L~~~~L~~I~~~~~vpLVlHGgSsv----------------p~~~~~~---~~~~gg~~-~~~~Gvp~e~i~~ai~ 246 (323)
T 2isw_A 189 IRLAIDRVKTISDLTGIPLVMHGSSSV----------------PKDVKDM---INKYGGKM-PDAVGVPIESIVHAIG 246 (323)
T ss_dssp -CCCCHHHHHHHHHHCSCEEECSCCCC----------------CHHHHHH---HHHTTCCC-TTCBCCCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhCCCeEEECCCCC----------------CHHHHHH---HHHhcccc-ccCCCCCHHHHHHHHH
No 364
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=38.06 E-value=1.1e+02 Score=27.18 Aligned_cols=104 Identities=15% Similarity=0.098 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC--------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
.+.+.+..++..+...+.||. |++|+++ +..|+..+++. .+ ...+ .+.++..-....|.++.+.+
T Consensus 146 ~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~~~---v~-~~~v--g~~~D~~H~~~~g~d~~~~l 218 (309)
T 2hk0_A 146 YARGVEGINGIADFANDLGIN-LCIEVLNRFENHVLNTAAEGVAFVKD---VG-KNNV--KVMLDTFHMNIEEDSFGDAI 218 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCE-EEEECCCTTTCSSCCSHHHHHHHHHH---HT-CTTE--EEEEEHHHHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEeecccccccccCCHHHHHHHHHH---cC-CCCe--EEEEehhhHhhcCcCHHHHH
Confidence 344555566666666668885 6679874 56666655544 33 1223 33333222233577888888
Q ss_pred HHhhcCCCceEEEECCC---Ch----hhHHHHHHHHhhhc-CCcEEEee
Q 019107 235 SIADSCEQVVAVGINCT---SP----RFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC~---~p----~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
+.+.. .+..|=++-. .| -....+++.|++.. +.++++-.
T Consensus 219 ~~~~~--~i~~vHl~D~~r~~~G~G~id~~~~~~~L~~~gy~g~i~lE~ 265 (309)
T 2hk0_A 219 RTAGP--LLGHFHTGESNRRVPGKGRMPWHEIGLALRDINYTGAVIMEP 265 (309)
T ss_dssp HHHGG--GEEEEEECCTTSCCTTSSCCCHHHHHHHHHHTTCCSEEEECC
T ss_pred HHHHh--hEEEEEeCCCCCCCCcCCccCHHHHHHHHHHcCCCCcEEEEe
Confidence 76632 3444444421 11 12455666665532 45666643
No 365
>2yim_A Probable alpha-methylacyl-COA racemase MCR (2-methylacyl-COA racemase) (2-arylpropionyl-COA...; isomerase, methyl-COA racemase; HET: MC4; 1.41A {Mycobacterium tuberculosis} PDB: 2gce_A* 1x74_A* 2gd0_A* 2gd2_A* 2gd6_A* 2gci_A*
Probab=38.06 E-value=56 Score=30.81 Aligned_cols=41 Identities=24% Similarity=0.223 Sum_probs=27.9
Q ss_pred ccCCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHH
Q 019107 49 CLVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (346)
Q Consensus 49 ~ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~ 94 (346)
+.+++|+-.+.+++ +-+.|||+++| |+ +..+.+.|++.+.+
T Consensus 59 lDLk~~~gr~~l~~--Lv~~ADV~ven-fr--PG~~~rlGl~ye~L 99 (360)
T 2yim_A 59 ADLKSDQGLELALK--LIAKADVLIEG-YR--PGVTERLGLGPEEC 99 (360)
T ss_dssp CCTTSHHHHHHHHH--HHTTCSEEEEC-SC--TTHHHHHTCSHHHH
T ss_pred EeCCCHHHHHHHHH--HHhhCCEEEEc-CC--cchHhhcCCCHHHH
Confidence 44567776555554 45779999998 44 55677779986543
No 366
>2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A*
Probab=38.00 E-value=1.6e+02 Score=29.17 Aligned_cols=50 Identities=14% Similarity=0.076 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhCC-CCEEEEc--------cCCCHHHHHHHHHHHHHhCCCCcEEEE-EEEc
Q 019107 168 EFHRRRVLILANSG-ADLIAFE--------TIPNKLEAKAYAELLEEEGITIPAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~g-vD~i~~E--------T~~~~~E~~a~~~a~~~~~~~~pv~is-~~~~ 219 (346)
+.+.+.++.|.+.| +|.|=+. .++++.+++..++.+.+.| +||+|| +.+.
T Consensus 394 ~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~~~~~~~~~~~~l~~~a~~G--l~i~iTElDi~ 453 (540)
T 2w5f_A 394 DCIASICANLYNKGLLDGVGMQSHINADMNGFSGIQNYKAALQKYINIG--CDVQITELDIS 453 (540)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCEEESCSSSTTCHHHHHHHHHHHHTTT--SEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCcccEEEEeeEecCCCCCCCCHHHHHHHHHHHHhcC--CcEEEEeeeec
Confidence 34446777777766 5766322 2468889999999888876 999998 4453
No 367
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=37.84 E-value=66 Score=28.10 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=26.0
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhC
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~ 207 (346)
++.+.+.|+|++-+=......-++++++++++.+
T Consensus 84 ~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g 117 (228)
T 3m47_A 84 CRATFKAGADAIIVHGFPGADSVRACLNVAEEMG 117 (228)
T ss_dssp HHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcC
Confidence 4456678999998866666666888888888776
No 368
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=37.82 E-value=1.9e+02 Score=24.71 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=36.9
Q ss_pred HHHHHHhCCCCEEEEccCCCH------HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE
Q 019107 173 RVLILANSGADLIAFETIPNK------LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV 246 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~------~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av 246 (346)
.++.+.+.|+|.|.+-.. +. .....+.+ +++. +.|+++.--+ .++.++...+. .++++|
T Consensus 35 ~a~~~~~~Gad~i~v~d~-~~~~~~~~~~~~~i~~-i~~~--~ipvi~~Ggi---------~~~~~~~~~~~--~Gad~V 99 (241)
T 1qo2_A 35 LVEKLIEEGFTLIHVVDL-SNAIENSGENLPVLEK-LSEF--AEHIQIGGGI---------RSLDYAEKLRK--LGYRRQ 99 (241)
T ss_dssp HHHHHHHTTCCCEEEEEH-HHHHHCCCTTHHHHHH-GGGG--GGGEEEESSC---------CSHHHHHHHHH--TTCCEE
T ss_pred HHHHHHHcCCCEEEEecc-cccccCCchhHHHHHH-HHhc--CCcEEEECCC---------CCHHHHHHHHH--CCCCEE
Confidence 455677799999976211 11 01121222 2222 4898865311 34455555443 367777
Q ss_pred EECCC---ChhhHHHH
Q 019107 247 GINCT---SPRFIHGL 259 (346)
Q Consensus 247 GvNC~---~p~~~~~~ 259 (346)
.+... .|+.+..+
T Consensus 100 ~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 100 IVSSKVLEDPSFLKSL 115 (241)
T ss_dssp EECHHHHHCTTHHHHH
T ss_pred EECchHhhChHHHHHH
Confidence 77664 34444444
No 369
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=37.79 E-value=17 Score=33.95 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=21.5
Q ss_pred CCChHHHHHHHHHHHHhhcceeecc
Q 019107 51 VSSPHLVRKVHLDYLDAGANIIITA 75 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~AGA~iI~Tn 75 (346)
++ ...|.+.+..|-+||||+|+|.
T Consensus 301 iD-~~~v~Esl~~~kRAGAd~IiTY 324 (337)
T 1w5q_A 301 LA-ESVILESLTAFKRAGADGILTY 324 (337)
T ss_dssp SC-TTHHHHHHHHHHHHTCSEEEET
T ss_pred cc-HHHHHHHHHHHHhcCCCEEeee
Confidence 56 7789999999999999999974
No 370
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=37.65 E-value=94 Score=27.02 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCC--------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIP--------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
.+.+.+..++..+...+.||. |.+|+++ +..++..++ ++.+ ...+-+.| +..-....|.++.+.+
T Consensus 128 ~~~~~~~l~~l~~~a~~~gv~-l~lEn~~~~~~~~~~~~~~~~~l~---~~~~-~~~~g~~~--D~~h~~~~g~d~~~~l 200 (290)
T 2qul_A 128 VDRAIESVRRVIKVAEDYGII-YALEVVNRFEQWLCNDAKEAIAFA---DAVD-SPACKVQL--DTFHMNIEETSFRDAI 200 (290)
T ss_dssp HHHHHHHHHTTHHHHHHHTCE-EEEECCCTTTCSSCCSHHHHHHHH---HHHC-CTTEEEEE--EHHHHHHHCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCE-EEEEeCccccccccCCHHHHHHHH---HHcC-CCCEEEEE--EchhhhhcCCCHHHHH
Confidence 445555666666666667885 5679875 556655544 4444 12233333 2222233577888888
Q ss_pred HHhhcCCCceEEEECCC---Ch----hhHHHHHHHHhhhc-CCcEEEee
Q 019107 235 SIADSCEQVVAVGINCT---SP----RFIHGLILSVRKVT-SKPVIIYP 275 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC~---~p----~~~~~~l~~l~~~~-~~pl~vyp 275 (346)
+.+. ..+..|=++=. .| -....+++.+++.. +.++++-.
T Consensus 201 ~~~~--~~i~~vH~~D~~~~~~G~G~id~~~~~~~L~~~gy~g~~~lE~ 247 (290)
T 2qul_A 201 LACK--GKMGHFHLGEANRLPPGEGRLPWDEIFGALKEIGYDGTIVMEP 247 (290)
T ss_dssp HHTT--TTEEEEEECCTTSCCTTSSCSCHHHHHHHHHHTTCCSCEEECC
T ss_pred HHHH--hheeEEEEccCCCCCCCCCCcCHHHHHHHHHHhCCCceEEEEe
Confidence 7663 23444444321 11 12455666665542 45666643
No 371
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=37.44 E-value=86 Score=28.85 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=36.6
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECC
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINC 250 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC 250 (346)
..++|+|.|.+.+| ++++++.+++.+. + +.++.+| .|-++..+.+.+. .++++|++-.
T Consensus 225 Al~aGaD~I~LDn~-~~~~l~~av~~i~--~-~v~ieaS----------GGI~~~~i~~~a~--tGVD~isvG~ 282 (298)
T 3gnn_A 225 ALAHGARSVLLDNF-TLDMMRDAVRVTE--G-RAVLEVS----------GGVNFDTVRAIAE--TGVDRISIGA 282 (298)
T ss_dssp HHHTTCEEEEEESC-CHHHHHHHHHHHT--T-SEEEEEE----------SSCSTTTHHHHHH--TTCSEEECGG
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhC--C-CCeEEEE----------cCCCHHHHHHHHH--cCCCEEEECC
Confidence 44579999999997 5677777776552 1 2333322 3445555555443 5788888766
No 372
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=37.43 E-value=1.4e+02 Score=27.79 Aligned_cols=95 Identities=12% Similarity=-0.022 Sum_probs=52.7
Q ss_pred HHHHHHHhhcCCCceEEEECCC-ChhhHHHHHHHHhhhc--CCcEEEeeCCCCcccc----------ccccccccCCCCh
Q 019107 230 ILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVT--SKPVIIYPNSGETYNA----------ELKKWVESTGVRD 296 (346)
Q Consensus 230 ~~~av~~~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~----------~~~~~~~~~~~~~ 296 (346)
+.+.+..+.. .+..++=+++. ++......++.+++.. +.+|.+-.|.|-..+. -.- |.+.. +.
T Consensus 149 ~~~~a~~~~~-~Gf~~iKik~g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE~P-~~- 224 (379)
T 2rdx_A 149 TRAELARHRA-AGYRQFQIKVGADWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILEQP-CR- 224 (379)
T ss_dssp HHHHHHHHHH-TTCCEEEEECCSCHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEECC-SS-
T ss_pred HHHHHHHHHH-cCCCEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEeCC-cC-
Confidence 3344444333 46788888887 4677777888888765 5788898887631110 011 43321 11
Q ss_pred HHHHHHHHHHH-HcCCeEEeecCCCchHHHHHHHH
Q 019107 297 EDFVSYIGKWR-DAGASLFGGCCRTTPNTIKAISR 330 (346)
Q Consensus 297 ~~~~~~~~~~~-~~G~~ivGGCCGt~P~hI~al~~ 330 (346)
++.. .++.. ..++.|+++=.=++++..+.+-+
T Consensus 225 -~~~~-~~~l~~~~~iPI~~de~i~~~~~~~~~i~ 257 (379)
T 2rdx_A 225 -SYEE-CQQVRRVADQPMKLDECVTGLHMAQRIVA 257 (379)
T ss_dssp -SHHH-HHHHHTTCCSCEEECTTCCSHHHHHHHHH
T ss_pred -CHHH-HHHHHhhCCCCEEEeCCcCCHHHHHHHHH
Confidence 2222 22222 23666766655577777766643
No 373
>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structu initiative; HET: MSE; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1pqy_A* 1q6y_A* 1pt7_A 1pt5_A 1pt8_A*
Probab=37.25 E-value=57 Score=31.60 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=21.1
Q ss_pred cCCChHHHHHHHHHHHHhhcceeeccccccCHHhHHhCCCCHHHH
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITASYQATIQGFEAKGFSTEEA 94 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~~g~~~~~~ 94 (346)
.+++|+-.+.+++ |-+.|||++.|- + +..+.+.|++.+.+
T Consensus 75 DLk~~eGr~~l~~--Lv~~ADVlienf-r--PGv~~rlGL~ye~L 114 (428)
T 1q7e_A 75 NTKTAEGKEVMEK--LIREADILVENF-H--PGAIDHMGFTWEHI 114 (428)
T ss_dssp CTTSHHHHHHHHH--HHHHCSEEEECC-C--C-------CCHHHH
T ss_pred eCCCHHHHHHHHH--HHhhCCEEEEcC-C--cchHhhcCCCHHHH
Confidence 3566765554444 456699999994 4 45577779886543
No 374
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=37.22 E-value=2e+02 Score=24.67 Aligned_cols=110 Identities=10% Similarity=0.062 Sum_probs=65.3
Q ss_pred HHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 172 RRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++++...+.|+|++..-- .+ ..++++.++.+ .|+++.+ .++.++..... .+++.|++ .
T Consensus 79 d~~~~A~~aGAd~v~~p~-~d----~~v~~~~~~~g--~~~i~G~-----------~t~~e~~~A~~--~Gad~v~~--F 136 (214)
T 1wbh_A 79 QQLAEVTEAGAQFAISPG-LT----EPLLKAATEGT--IPLIPGI-----------STVSELMLGMD--YGLKEFKF--F 136 (214)
T ss_dssp HHHHHHHHHTCSCEEESS-CC----HHHHHHHHHSS--SCEEEEE-----------SSHHHHHHHHH--TTCCEEEE--T
T ss_pred HHHHHHHHcCCCEEEcCC-CC----HHHHHHHHHhC--CCEEEec-----------CCHHHHHHHHH--CCCCEEEE--e
Confidence 356677778999998542 22 34556666655 8888752 13567766553 47899999 3
Q ss_pred Chhh--HHHHHHHHhhhc-CCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHc-CCeEEeecCCCchHH
Q 019107 252 SPRF--IHGLILSVRKVT-SKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDA-GASLFGGCCRTTPNT 324 (346)
Q Consensus 252 ~p~~--~~~~l~~l~~~~-~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~ivGGCCGt~P~h 324 (346)
+... -...|+.++... ..|+ .|-.|. +++ .+.+|++. |+..+||--=+..+.
T Consensus 137 pa~~~gG~~~lk~i~~~~~~ipv--vaiGGI---------------~~~----n~~~~l~agg~~~v~gS~i~~~~~ 192 (214)
T 1wbh_A 137 PAEANGGVKALQAIAGPFSQVRF--CPTGGI---------------SPA----NYRDYLALKSVLCIGGSWLVPADA 192 (214)
T ss_dssp TTTTTTHHHHHHHHHTTCTTCEE--EEBSSC---------------CTT----THHHHHTSTTBSCEEEGGGSCHHH
T ss_pred cCccccCHHHHHHHhhhCCCCeE--EEECCC---------------CHH----HHHHHHhcCCCeEEEeccccChhh
Confidence 2122 257778877654 4564 344442 222 23457887 777777544444443
No 375
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=37.19 E-value=1.6e+02 Score=26.79 Aligned_cols=77 Identities=16% Similarity=0.084 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhCC--CCEEEEcc-----CCCHHHHHHHHHHHHHhCCCC-cEEEE-EEEcCCCcccCCCCHHHHHHHhh
Q 019107 168 EFHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLEEEGITI-PAWFS-FNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~~~~~~~-pv~is-~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
+.+.+.++.|.+.| +|.|=+.. .+...+++..++.+.+.| + ||||| +.+... ....+.+++..+.
T Consensus 184 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~~~l~~~a~~G--~~pi~iTEldi~~~----qa~~y~~~~~~~~ 257 (303)
T 1ta3_B 184 QAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSSTEAAGALSSLANTG--VSEVAITELDIAGA----ASSDYLNLLNACL 257 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTCCCGGGHHHHHHHHHTTC--CSEEEEEEEEETTC----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCCHHHHHHHHHHHHHCC--CCeEEEeeCCcChh----HHHHHHHHHHHHH
Confidence 45566788887777 59986532 233467888888888776 8 99998 555421 1122444454443
Q ss_pred cCCCceEEEECCCC
Q 019107 239 SCEQVVAVGINCTS 252 (346)
Q Consensus 239 ~~~~~~avGvNC~~ 252 (346)
+. +.++||.-.+
T Consensus 258 ~~--~~v~git~Wg 269 (303)
T 1ta3_B 258 NE--QKCVGITVWG 269 (303)
T ss_dssp TC--TTEEEEEESC
T ss_pred hC--CCceEEEEec
Confidence 32 3455555543
No 376
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=36.97 E-value=2.2e+02 Score=29.58 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEE-ccC--CCH--HHHHHHHHHHHHhC---CCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 163 LETLKEFHRRRVLILANSGADLIAF-ETI--PNK--LEAKAYAELLEEEG---ITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~-ET~--~~~--~E~~a~~~a~~~~~---~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
.+.+.+.|.+.++.|.+.|++.+-+ |-. .++ +...++..+.+... .+.++++...|.+-. ..
T Consensus 176 l~~L~~~y~~~l~~L~~~Ga~~VQiDEP~L~~dl~~~~~~~~~~ay~~l~~~~~~~~v~lhtyfG~~~----------~~ 245 (755)
T 2nq5_A 176 VKSLLPLYKQVFTELVKAGASYIQVDEPIFVTDEGKDYLQAAKAVYAYFAKEVPDAKFIFQTYFEGLI----------DS 245 (755)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSSGGGGGHHHHHHHHHHHHHHSTTCEEEEECCSSCCT----------TH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCHHHHHHHHHHHHHHHhcccCCcEEEEEeCCChH----------HH
Confidence 3567778999999999999999753 311 111 11222233333320 036777664442211 34
Q ss_pred HHhhcCCCceEEEECCCC-h-hhHHHHHHHHhhhcCCc--EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcC
Q 019107 235 SIADSCEQVVAVGINCTS-P-RFIHGLILSVRKVTSKP--VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAG 310 (346)
Q Consensus 235 ~~~~~~~~~~avGvNC~~-p-~~~~~~l~~l~~~~~~p--l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 310 (346)
..+.. .+++++++-++. + +.+..+.+.+. .++- +++-+ + ...|.+ ++++..+.+++..+..
T Consensus 246 ~~l~~-l~vd~l~lD~v~~~~~~l~~l~~~~~--~~k~L~~GvVd-------g-rniw~~----d~e~v~~~l~~~~~~~ 310 (755)
T 2nq5_A 246 QVLSQ-LPVDAFGLDFVYGLEENLEAIKTGAF--KGKEIFAGVID-------G-RNIWSS----DFVKTSALLETIEEQS 310 (755)
T ss_dssp HHHTT-SSCSEEEEESSSSHHHHHHHHHTTTT--TTSEEEEEEEC-------T-TSCBCC----CHHHHHHHHHHHHHTS
T ss_pred HHHHh-CCCCEEEEEecCCChhhHHHHHHhcC--CCCEEEEEeeC-------C-cccCCC----CHHHHHHHHHHHHhhc
Confidence 44444 479999999874 4 33322222121 1222 23322 1 124643 4677777776665431
Q ss_pred -CeEEeecCCC
Q 019107 311 -ASLFGGCCRT 320 (346)
Q Consensus 311 -~~ivGGCCGt 320 (346)
--+|.=-||.
T Consensus 311 ~~l~vsPsCsL 321 (755)
T 2nq5_A 311 AALTIQPSCSL 321 (755)
T ss_dssp SEEEEEESSCG
T ss_pred CCEEEcCCCCc
Confidence 1378888874
No 377
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=36.70 E-value=87 Score=27.58 Aligned_cols=49 Identities=14% Similarity=0.141 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
-+.+++.++..+.++.|.+.|+|+|++=....- ..+++.+++.- +.||+
T Consensus 42 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa~---~~~~~~lr~~~-~iPvi 90 (255)
T 2jfz_A 42 KDPTTIKQFGLEALDFFKPHEIELLIVACNTAS---ALALEEMQKYS-KIPIV 90 (255)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCCSCEEECCHHHH---HHTHHHHHHHC-SSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh---HHHHHHHHHhC-CCCEE
Confidence 478999999999999999999999986532111 11345555543 47766
No 378
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=36.68 E-value=2.6e+02 Score=25.96 Aligned_cols=145 Identities=10% Similarity=0.083 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccC----------CC------------HH---HHHHHHHHHHHh-CCCCcEEEEE
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETI----------PN------------KL---EAKAYAELLEEE-GITIPAWFSF 216 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~----------~~------------~~---E~~a~~~a~~~~-~~~~pv~is~ 216 (346)
.+++.+.|.+.++.+.++|.|.|=+--- |. .. -+..+++++++. +.+ ||.+-+
T Consensus 156 I~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~-~v~vrl 234 (364)
T 1vyr_A 156 IPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD-RIGIRV 234 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-GEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-cEEEEE
Confidence 4455567777777788899999854210 11 11 244456666664 324 888877
Q ss_pred EEcCCCc-c-cCCCCHHHHHH---HhhcCCCceEEEECCCC----hhhHHHHHHHHhhhcCCcEEEeeCCCCcccccccc
Q 019107 217 NSKDGIN-V-VSGDSILECAS---IADSCEQVVAVGINCTS----PRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKK 287 (346)
Q Consensus 217 ~~~~~~~-l-~~G~~~~~av~---~~~~~~~~~avGvNC~~----p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~ 287 (346)
+..+.-. + .++.++.++++ .+++ .+++.|-+-+.. |..-...++.+++..+.|+++- .|
T Consensus 235 s~~~~~~~~~~~~~~~~~~~~~a~~l~~-~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~--Gg--------- 302 (364)
T 1vyr_A 235 SPIGTFQNVDNGPNEEADALYLIEELAK-RGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGA--GA--------- 302 (364)
T ss_dssp CCSSCBTTBCCCTTHHHHHHHHHHHHHH-TTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEE--SS---------
T ss_pred ccccccccccCCCCCHHHHHHHHHHHHH-hCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEE--CC---------
Confidence 7643211 1 23556666544 4444 578888876631 1112356677777778887652 22
Q ss_pred ccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHH
Q 019107 288 WVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISR 330 (346)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~ 330 (346)
++++++. +.++.| +.+|+=+=+ ..|+-.+++++
T Consensus 303 ------it~~~a~----~~l~~g~aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 303 ------YTAEKAE----DLIGKGLIDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp ------CCHHHHH----HHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred ------cCHHHHH----HHHHCCCccEEEECHHHHhChhHHHHHHc
Confidence 1233333 355555 777764322 36777777764
No 379
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=36.56 E-value=72 Score=28.24 Aligned_cols=67 Identities=19% Similarity=0.103 Sum_probs=42.7
Q ss_pred CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHH---HHHHHhhcCCCceEEEECCC
Q 019107 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSIL---ECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~---~av~~~~~~~~~~avGvNC~ 251 (346)
+|++ .|+.+++.++.+-+.+.+.+...+|++-+..-. ...+.|-++. +.+..+....++...|+-|.
T Consensus 98 ~~~i--~sVds~~~a~~l~~~a~~~~~~~~V~lqVntG~-e~~R~G~~~ee~~~l~~~i~~~~~l~l~Glmt~ 167 (245)
T 3sy1_A 98 FDWC--ITIDRLRIATRLNDQRPAELPPLNVLIQINISD-ENSKSGIQLAELDELAAAVAELPRLRLRGLSAI 167 (245)
T ss_dssp CSEE--EEECCHHHHHHHHHHSCTTSCCEEEEEEBCCSC-TTCCSSBCGGGHHHHHHHHTTCTTEEEEEEECC
T ss_pred CCEE--EecCCHHHHHHHHHHHHHcCCCceEEEEEECCC-CcCCcCCCHHHHHHHHHHHHcCCCCeEEEEEEe
Confidence 5654 789999999888877776664566776664321 1234665444 44555555567778888764
No 380
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=36.47 E-value=2.3e+02 Score=25.18 Aligned_cols=117 Identities=10% Similarity=0.082 Sum_probs=61.4
Q ss_pred HHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEE-E
Q 019107 173 RVLILANSGADLIAFET----IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAV-G 247 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~av-G 247 (346)
+++.+.+.|+|+|=+-. ++..+|++.++..+++.. +.| +|+- .....-+-..++...++.-| -
T Consensus 30 ~a~~~v~~GAdiIDIg~g~~~v~~~ee~~rvv~~i~~~~-~~p--isID---------T~~~~v~~aAl~a~~Ga~iINd 97 (262)
T 1f6y_A 30 WARRQEEGGARALDLNVGPAVQDKVSAMEWLVEVTQEVS-NLT--LCLD---------STNIKAIEAGLKKCKNRAMINS 97 (262)
T ss_dssp HHHHHHHHTCSEEEEBCC----CHHHHHHHHHHHHHTTC-CSE--EEEE---------CSCHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHCCCcEEEECCCCCCCChHHHHHHHHHHHHHhC-CCe--EEEe---------CCCHHHHHHHHhhCCCCCEEEE
Confidence 55566679999997663 566778888888888741 344 5552 22333222233332243332 2
Q ss_pred ECCCChhhHHHHHHHHhhhcCCcEEEeeC--CCCccccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 248 INCTSPRFIHGLILSVRKVTSKPVIIYPN--SGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 248 vNC~~p~~~~~~l~~l~~~~~~pl~vypN--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
||-. .+.+..+++...+ .+.|+++.++ .|... ++.. ..+.+.+.+....+.|+.
T Consensus 98 vs~~-~d~~~~~~~~~a~-~~~~vvlmh~~~~G~p~-----t~~~----~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 98 TNAE-REKVEKLFPLAVE-HGAALIGLTMNKTGIPK-----DSDT----RLAFAMELVAAADEFGLP 153 (262)
T ss_dssp ECSC-HHHHHHHHHHHHH-TTCEEEEESCCSSCSCS-----SHHH----HHHHHHHHHHHHHHHTCC
T ss_pred CCCC-cccHHHHHHHHHH-hCCcEEEEcCCCCCCCC-----CHHH----HHHHHHHHHHHHHHCCCC
Confidence 4433 3333344444433 3679999887 34211 1110 123345555666677874
No 381
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=36.41 E-value=2.7e+02 Score=26.05 Aligned_cols=142 Identities=18% Similarity=0.143 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEEccCCCHH--HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc-CCCc
Q 019107 167 KEFHRRRVLILANSGADLIAFETIPNKL--EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS-CEQV 243 (346)
Q Consensus 167 ~~~~~~~i~~l~~~gvD~i~~ET~~~~~--E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~-~~~~ 243 (346)
.++.+..++...+.|+-+.+=|....++ ++..-.+.+++...+.|++.++... .+..|.++..+.+.++. ..++
T Consensus 75 ~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~~anlg~~---ql~~~~~~~~~~~av~~~~a~a 151 (368)
T 3vkj_A 75 GRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPIIANLGMP---QLVKGYGLKEFQDAIQMIEADA 151 (368)
T ss_dssp HHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCEEEEEEGG---GGGTTCCHHHHHHHHHHTTCSE
T ss_pred hHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcceecCcCee---ecCCCCCHHHHHHHHHHhcCCC
Confidence 3445556667777899888766532221 2222223345444478999888642 23334556655444432 1345
Q ss_pred eEEEECCC----Ch--h-----hHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 244 VAVGINCT----SP--R-----FIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 244 ~avGvNC~----~p--~-----~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
..|-+|-. +| + .....++.+++..+.|+++.- .| | .+++ +.++.+.+.|+.
T Consensus 152 l~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~-vG---------~----g~s~----~~A~~l~~aGad 213 (368)
T 3vkj_A 152 IAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE-SG---------N----GISM----ETAKLLYSYGIK 213 (368)
T ss_dssp EEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC-SS---------S----CCCH----HHHHHHHHTTCC
T ss_pred eEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe-CC---------C----CCCH----HHHHHHHhCCCC
Confidence 55666631 12 1 256678888888899999873 11 0 0223 235667788876
Q ss_pred E--EeecCCCchHHHHHHH
Q 019107 313 L--FGGCCRTTPNTIKAIS 329 (346)
Q Consensus 313 i--vGGCCGt~P~hI~al~ 329 (346)
. |+|..||+...|+..+
T Consensus 214 ~I~V~g~GGt~~~~iE~~R 232 (368)
T 3vkj_A 214 NFDTSGQGGTNWIAIEMIR 232 (368)
T ss_dssp EEECCCBTSBCHHHHHHHH
T ss_pred EEEEeCCCCCcccchhhhh
Confidence 5 4555677666555544
No 382
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=36.34 E-value=66 Score=31.13 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-EEEEccCC----------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHH
Q 019107 164 ETLKEFHRRRVLILANSGAD-LIAFETIP----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~gvD-~i~~ET~~----------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
+.+.+..++.++...+.|++ .|++|.+| +..++..+ +++.+.+..+-+.+- ..-....|.++.+
T Consensus 206 ~~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~~~al~l---i~~vg~pn~vgv~lD--t~H~~~~g~di~~ 280 (438)
T 1a0c_A 206 DNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVANVLAF---LRKYDLDKYFKVNIE--ANHATLAFHDFQH 280 (438)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHHHHHHH---HHHTTCTTTEEEEEE--HHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCHHHHHHH---HHHcCCCCeEEEEEE--hhhhhhcCCCHHH
Confidence 34455555555555557776 77889774 44555544 455441122555542 2222357888888
Q ss_pred HHHHhhcCCCceEEEECC
Q 019107 233 CASIADSCEQVVAVGINC 250 (346)
Q Consensus 233 av~~~~~~~~~~avGvNC 250 (346)
.++.+.....+..|=+|=
T Consensus 281 ~i~~~~~~~~L~hvHlnD 298 (438)
T 1a0c_A 281 ELRYARINGVLGSIDANT 298 (438)
T ss_dssp HHHHHHHTTCEEEEECCB
T ss_pred HHHHhcCCCcEEEEECCC
Confidence 877653222344555543
No 383
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=36.05 E-value=1.2e+02 Score=27.69 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=38.1
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
..++|+|+|++-.| ++.+.+.+++.++. +.|+.+| .|-++..+.+.+. .++++|.+
T Consensus 212 A~~aGaD~I~ld~~-~~~~~k~av~~v~~---~ipi~As----------GGIt~eni~~~a~--tGvD~IsV 267 (286)
T 1x1o_A 212 ALEAGADLILLDNF-PLEALREAVRRVGG---RVPLEAS----------GNMTLERAKAAAE--AGVDYVSV 267 (286)
T ss_dssp HHHHTCSEEEEESC-CHHHHHHHHHHHTT---SSCEEEE----------SSCCHHHHHHHHH--HTCSEEEC
T ss_pred HHHcCCCEEEECCC-CHHHHHHHHHHhCC---CCeEEEE----------cCCCHHHHHHHHH--cCCCEEEE
Confidence 33468999999987 56777766665541 4666643 4677777776664 36888877
No 384
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum}
Probab=35.84 E-value=2.6e+02 Score=25.67 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCC--CCEEEEc-------------cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 168 EFHRRRVLILANSG--ADLIAFE-------------TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~E-------------T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
+.+.+.++.|.+.| +|.|=+. ..|++.+++..++.+.+.| +||+||=
T Consensus 184 ~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (327)
T 3u7b_A 184 EGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTPSRAKLASVLQGLADLG--VDVAYTE 245 (327)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCCCHHHHHHHHHHHHTTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCCCHHHHHHHHHHHHhcC--CceEEEe
Confidence 35567788888877 4877322 3588899999999998876 9999885
No 385
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=35.79 E-value=2.3e+02 Score=26.21 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCC--CCEEEEcc----C-CCH--HHHHHHHHHHHHhCCCCcEEEE-EEE
Q 019107 168 EFHRRRVLILANSG--ADLIAFET----I-PNK--LEAKAYAELLEEEGITIPAWFS-FNS 218 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~ET----~-~~~--~E~~a~~~a~~~~~~~~pv~is-~~~ 218 (346)
+.+.+.++.|.+.| +|.|=+.. - +.. .+++..++.+.+.| +||+|| +.+
T Consensus 209 ~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~~~~~~~~~~~l~~~a~~G--~pi~iTEldi 267 (347)
T 1xyz_A 209 NAVFNMIKSMKERGVPIDGVGFQCHFINGMSPEYLASIDQNIKRYAEIG--VIVSFTEIDI 267 (347)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCCHHHHHHHHHHHHHHHHTT--CEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEEEeeecCCCCCchhHHHHHHHHHHHHhcC--CceEEEeccc
Confidence 34556777777777 59886542 1 222 57888888888876 999998 444
No 386
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=35.71 E-value=1.4e+02 Score=29.12 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=76.0
Q ss_pred HHHHHHhCCCCEEEEc-cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 173 RVLILANSGADLIAFE-TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E-T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
|+......|+|.+++- ++-+..+++..++.+++.| +-+++-+. +.+++-..+. .+++.||+|=.
T Consensus 122 Qi~ea~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lg--m~~LvEvh-----------~~eE~~~A~~--lga~iIGinnr 186 (452)
T 1pii_A 122 QIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLE--MGVLTEVS-----------NEEEQERAIA--LGAKVVGINNR 186 (452)
T ss_dssp HHHHHHHTTCSEEEEETTTCCHHHHHHHHHHHHHTT--CEEEEEEC-----------SHHHHHHHHH--TTCSEEEEESE
T ss_pred HHHHHHHcCCCEEEEEcccCCHHHHHHHHHHHHHcC--CeEEEEeC-----------CHHHHHHHHH--CCCCEEEEeCC
Confidence 4555777999998755 6666678898999999876 77776662 3466665554 37889999973
Q ss_pred C-------hhhHHHHHHHHhhhcCCcEEEeeCCCCccccc--------cccc-cccCCCChHHHHHHHHHHHHcCCeEEe
Q 019107 252 S-------PRFIHGLILSVRKVTSKPVIIYPNSGETYNAE--------LKKW-VESTGVRDEDFVSYIGKWRDAGASLFG 315 (346)
Q Consensus 252 ~-------p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~G~~ivG 315 (346)
. .+....+++.+.. +.+++.- +|- +.+. .... +....+.+++..+.+++++..-++|
T Consensus 187 ~L~t~~~dl~~~~~L~~~ip~--~~~vIaE--sGI-~t~edv~~~~~~a~avLVGealmr~~d~~~~~~~l~~~~~KI-- 259 (452)
T 1pii_A 187 DLRDLSIDLNRTRELAPKLGH--NVTVISE--SGI-NTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKV-- 259 (452)
T ss_dssp ETTTTEECTHHHHHHHHHHCT--TSEEEEE--SCC-CCHHHHHHHTTTCSEEEECHHHHTCSCHHHHHHHHHHCSCEE--
T ss_pred CCCCCCCCHHHHHHHHHhCCC--CCeEEEE--CCC-CCHHHHHHHHHhCCEEEEcHHHcCCcCHHHHHHHHHHHhccc--
Confidence 2 2334444444421 3444432 331 1110 0000 0000012334455555565444444
Q ss_pred ecCCCchHHHHHHHHH
Q 019107 316 GCCRTTPNTIKAISRV 331 (346)
Q Consensus 316 GCCGt~P~hI~al~~~ 331 (346)
|+=|+++++++..+.
T Consensus 260 -CGit~~eda~~a~~~ 274 (452)
T 1pii_A 260 -CGLTRGQDAKAAYDA 274 (452)
T ss_dssp -CCCCSHHHHHHHHHH
T ss_pred -cCCCcHHHHHHHHhc
Confidence 445777777777655
No 387
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=35.65 E-value=3.2e+02 Score=26.68 Aligned_cols=66 Identities=9% Similarity=0.050 Sum_probs=41.6
Q ss_pred HHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++++.|.++|+|++.+-+- ++...+...++.+++.-.+.|+++.- + .+.+++...++ .++++|-+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~-v---------~t~e~a~~~~~--aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGN-V---------ATAEATKALIE--AGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEE-E---------CSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeee-e---------ccHHHHHHHHH--hCCCEEEE
Confidence 35678899999999998643 34455555666666653257888632 1 24555555444 36777766
No 388
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=35.61 E-value=3.5e+02 Score=29.57 Aligned_cols=63 Identities=16% Similarity=0.235 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEc-cC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh
Q 019107 168 EFHRRRVLILANSGADLIAFE-TI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA 237 (346)
Q Consensus 168 ~~~~~~i~~l~~~gvD~i~~E-T~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~ 237 (346)
+++.+.++.+.+.|+|.|.+= |. -.+.++..+++++++.- ++| +++.++++. |..++.++..+
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~--i~~H~Hnt~----G~a~An~laA~ 757 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLP--IHLHTHDTS----GNGLLTYKQAI 757 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSC--EEEEECBTT----SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCe--EEEEeCCCC----cHHHHHHHHHH
Confidence 567778888999999999764 43 47788999999888853 455 566666543 44444444444
No 389
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=35.27 E-value=2.6e+02 Score=25.54 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=60.4
Q ss_pred HHHHHHHhCCCCEEEEccCC--------------CHHHHH----HHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 172 RRVLILANSGADLIAFETIP--------------NKLEAK----AYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~--------------~~~E~~----a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
+-++.+.++|++.+-+|-.. +.+|.. +++++.++.+ .+++|.-.++. .. +..++++
T Consensus 99 ~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~--~d~~I~ARTDa--~~--~~gldeA 172 (302)
T 3fa4_A 99 RTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG--SDIVVIARTDS--LQ--THGYEES 172 (302)
T ss_dssp HHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT--CCCEEEEEECC--HH--HHCHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC--CCEEEEEEecc--cc--cCCHHHH
Confidence 34777888999999999653 344544 3444333334 66777665543 22 2358899
Q ss_pred HHHhhc--CCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEE
Q 019107 234 ASIADS--CEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~v 273 (346)
++.+.. ..|+++|-+-+. +++.+..+.+.+. ..|+.+
T Consensus 173 i~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~---~~Pl~~ 212 (302)
T 3fa4_A 173 VARLRAARDAGADVGFLEGITSREMARQVIQDLA---GWPLLL 212 (302)
T ss_dssp HHHHHHHHTTTCSEEEETTCCCHHHHHHHHHHTT---TSCEEE
T ss_pred HHHHHHHHHcCCCEEeecCCCCHHHHHHHHHHhc---CCceeE
Confidence 887753 258899999886 5777776666653 368755
No 390
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.26 E-value=1.5e+02 Score=22.62 Aligned_cols=75 Identities=13% Similarity=0.036 Sum_probs=38.0
Q ss_pred HHhCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhh
Q 019107 177 LANSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRF 255 (346)
Q Consensus 177 l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~ 255 (346)
+.+...|++++... +.. ....+++.+++.....|+++-. +..+.......+. .+++.+-..=..++.
T Consensus 62 l~~~~~dlii~D~~l~~~-~g~~~~~~l~~~~~~~~ii~ls---------~~~~~~~~~~~~~--~g~~~~l~Kp~~~~~ 129 (150)
T 4e7p_A 62 LEKESVDIAILDVEMPVK-TGLEVLEWIRSEKLETKVVVVT---------TFKRAGYFERAVK--AGVDAYVLKERSIAD 129 (150)
T ss_dssp HTTSCCSEEEECSSCSSS-CHHHHHHHHHHTTCSCEEEEEE---------SCCCHHHHHHHHH--TTCSEEEETTSCHHH
T ss_pred hhccCCCEEEEeCCCCCC-cHHHHHHHHHHhCCCCeEEEEe---------CCCCHHHHHHHHH--CCCcEEEecCCCHHH
Confidence 44466788888743 332 3344555556544456655332 1223333444443 356666665445555
Q ss_pred HHHHHHHH
Q 019107 256 IHGLILSV 263 (346)
Q Consensus 256 ~~~~l~~l 263 (346)
+...++.+
T Consensus 130 l~~~i~~~ 137 (150)
T 4e7p_A 130 LMQTLHTV 137 (150)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555544
No 391
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=35.25 E-value=70 Score=28.65 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=43.7
Q ss_pred CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCC---HHHHHHHhhcCCCceEEEECCC
Q 019107 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS---ILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~---~~~av~~~~~~~~~~avGvNC~ 251 (346)
.|+ ..++.++++++.+-+++++.+...+|++-+..-.+ .-+.|-+ +.++++.+....++...|+-|.
T Consensus 135 ~~l--~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme-~~R~G~~~ee~~~l~~~i~~~~~l~l~Gl~th 204 (282)
T 3cpg_A 135 VDT--IESVDSIDLAEKISRRAVARGITVGVLLEVNESGE-ESKSGCDPAHAIRIAQKIGTLDGIELQGLMTI 204 (282)
T ss_dssp CSE--EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSC-TTSSSBCGGGHHHHHHHHHTCTTEEEEEEECC
T ss_pred CCE--EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCC-CCCCCcCHHHHHHHHHHHHhCCCceEEeEEEE
Confidence 565 46789999999888877776645677766643210 1345644 4445555555567888899885
No 392
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=35.21 E-value=67 Score=29.99 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhCC--CCEEEEcc-----CCCHHHHHHHHHHHH--HhCCCCcEEEE-EEEc
Q 019107 169 FHRRRVLILANSG--ADLIAFET-----IPNKLEAKAYAELLE--EEGITIPAWFS-FNSK 219 (346)
Q Consensus 169 ~~~~~i~~l~~~g--vD~i~~ET-----~~~~~E~~a~~~a~~--~~~~~~pv~is-~~~~ 219 (346)
.+..+++.|.+.| +|.|=+.. .|++.+++.+++.+. ..| +||+|| +.+.
T Consensus 193 ~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~~~a~~~~G--l~i~ITElDv~ 251 (348)
T 1w32_A 193 ALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQKIVALSPT--LKIKITELDVR 251 (348)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHHHHHTTCSS--CEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHHHHhcccCC--CeEEEEeCccc
Confidence 3556788887777 59985543 478899999999888 765 999999 4443
No 393
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=35.18 E-value=1.4e+02 Score=28.40 Aligned_cols=85 Identities=12% Similarity=0.128 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHHH-HhCCCCEEEEccC---CCHH-HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHH
Q 019107 161 VSLETLKEFHRRRVLIL-ANSGADLIAFETI---PNKL-EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECAS 235 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l-~~~gvD~i~~ET~---~~~~-E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~ 235 (346)
.+.+.+. +.++.+ .+.+||.+++-.+ .+.+ =++++++++++.+.++|+++.| .|....+..+
T Consensus 284 a~~e~~~----~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~---------~G~~~~~~~~ 350 (397)
T 3ufx_B 284 AKADVVY----NALKVVLKDPDVKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRV---------AGTAEEEAKK 350 (397)
T ss_dssp CCHHHHH----HHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEE---------EEECHHHHHH
T ss_pred CCHHHHH----HHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEc---------cCCCHHHHHH
Confidence 4555444 445544 4678998876322 2333 3567788888764569999988 3556677777
Q ss_pred HhhcCCCceEEEECCCChhhHHHHHHHH
Q 019107 236 IADSCEQVVAVGINCTSPRFIHGLILSV 263 (346)
Q Consensus 236 ~~~~~~~~~avGvNC~~p~~~~~~l~~l 263 (346)
.+.. .+ | -.+..|+..-..+-++
T Consensus 351 ~l~~-~g---i-p~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 351 LLEG-KP---V-YMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HTTT-SS---E-EECSSHHHHHHHHHHS
T ss_pred HHHh-CC---C-cccCCHHHHHHHHHHH
Confidence 6654 23 1 2234565444444443
No 394
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=35.08 E-value=2.6e+02 Score=25.41 Aligned_cols=108 Identities=23% Similarity=0.230 Sum_probs=65.8
Q ss_pred ChHHHHHHHHHHHHhhcceeecc-ccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITA-SYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~Tn-Ty~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|..+ |-+-. .. ++.++-.++.+.+++.+ .+
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-~~-----Ls~eEr~~v~~~~v~~~------------------------~g 80 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGNTSEF-YA-----LSLEEAKEEVRRTVEYV------------------------HG 80 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSGGGTG-GG-----SCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCc-cc-----CCHHHHHHHHHHHHHHh------------------------CC
Confidence 56788888888999999966543 32211 11 34455556666555433 23
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEcc----CCCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFET----IPNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET----~~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+|. |. +.++..+ +++...+.|+|.+++=+ -++.+++..-.+.+.+..
T Consensus 81 rvpViaGv-g~-------------------~t~~ai~----la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 136 (316)
T 3e96_A 81 RALVVAGI-GY-------------------ATSTAIE----LGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL 136 (316)
T ss_dssp SSEEEEEE-CS-------------------SHHHHHH----HHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEe-Cc-------------------CHHHHHH----HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 34567773 42 1234333 45566678999998643 237778877777665542
Q ss_pred CCCcEEEE
Q 019107 208 ITIPAWFS 215 (346)
Q Consensus 208 ~~~pv~is 215 (346)
++|+++=
T Consensus 137 -~lPiilY 143 (316)
T 3e96_A 137 -DFPSLVY 143 (316)
T ss_dssp -TSCEEEE
T ss_pred -CCCEEEE
Confidence 4999864
No 395
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=34.99 E-value=2.6e+02 Score=25.42 Aligned_cols=72 Identities=11% Similarity=0.012 Sum_probs=46.8
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p 253 (346)
+.+..++|.-.++.-.+.+.++++..++.+++.. +.|+-+.+.+.+ .++.+.++.+.. .++++|-++...|
T Consensus 43 a~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~-~~p~gVnl~~~~-------~~~~~~~~~~~~-~g~d~V~l~~g~p 113 (326)
T 3bo9_A 43 AAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKT-DKPFGVNIILVS-------PWADDLVKVCIE-EKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTC-SSCEEEEEETTS-------TTHHHHHHHHHH-TTCSEEEEESSCC
T ss_pred HHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhc-CCCEEEEEeccC-------CCHHHHHHHHHH-CCCCEEEECCCCc
Confidence 3445556654444455568888888888888753 589998886522 235667766654 4778887877655
Q ss_pred h
Q 019107 254 R 254 (346)
Q Consensus 254 ~ 254 (346)
.
T Consensus 114 ~ 114 (326)
T 3bo9_A 114 T 114 (326)
T ss_dssp H
T ss_pred H
Confidence 3
No 396
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.98 E-value=1.1e+02 Score=27.20 Aligned_cols=90 Identities=13% Similarity=0.115 Sum_probs=51.1
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCce-EEEECC-
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVV-AVGINC- 250 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~-avGvNC- 250 (346)
-++.+.++|+|.+++=..+. +|+...++.+++.+ ++.+.-+ . ..++.+.+...+....+.. .+.++-
T Consensus 114 ~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g--~~~i~l~--~------p~t~~~~i~~i~~~~~g~v~~~s~~G~ 182 (268)
T 1qop_A 114 FYARCEQVGVDSVLVADVPV-EESAPFRQAALRHN--IAPIFIC--P------PNADDDLLRQVASYGRGYTYLLSRSGV 182 (268)
T ss_dssp HHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTT--CEEECEE--C------TTCCHHHHHHHHHHCCSCEEEESSSSC
T ss_pred HHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcC--CcEEEEE--C------CCCCHHHHHHHHhhCCCcEEEEecCCc
Confidence 35567778999887655553 57778888888876 5554322 1 2234343333333222322 334442
Q ss_pred CC-----hhhHHHHHHHHhhhcCCcEEE
Q 019107 251 TS-----PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 251 ~~-----p~~~~~~l~~l~~~~~~pl~v 273 (346)
++ +..+...++.+++..+.|+.+
T Consensus 183 tG~~~~~~~~~~~~i~~lr~~~~~pi~v 210 (268)
T 1qop_A 183 TGAENRGALPLHHLIEKLKEYHAAPALQ 210 (268)
T ss_dssp CCSSSCC--CCHHHHHHHHHTTCCCEEE
T ss_pred CCCccCCCchHHHHHHHHHhccCCcEEE
Confidence 22 233567788888877788766
No 397
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=34.94 E-value=1.7e+02 Score=26.80 Aligned_cols=106 Identities=8% Similarity=0.009 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHH------------------HHHHHHHHHHhC--CCCcEEEEEEEcCCC
Q 019107 163 LETLKEFHRRRVLILANSGADLIAFETIPNKLE------------------AKAYAELLEEEG--ITIPAWFSFNSKDGI 222 (346)
Q Consensus 163 ~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E------------------~~a~~~a~~~~~--~~~pv~is~~~~~~~ 222 (346)
.+.+.++-+..++.|.+.|++.-++.+...+.- .+++.+++|+.. ...++++.+.-..+.
T Consensus 107 ~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~~~~~ 186 (334)
T 1fob_A 107 KWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSW 186 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCCcCch
Q ss_pred cccCCCCHHHHHHHhhcCC-----CceEEEECC----C---ChhhHHHHHHHHhhhcCCcEEE
Q 019107 223 NVVSGDSILECASIADSCE-----QVVAVGINC----T---SPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 223 ~l~~G~~~~~av~~~~~~~-----~~~avGvNC----~---~p~~~~~~l~~l~~~~~~pl~v 273 (346)
. .+......+.... ..|.||+|+ . .++.+...|+.+.+.-.+|+++
T Consensus 187 ~-----~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~i 244 (334)
T 1fob_A 187 D-----QQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVV 244 (334)
T ss_dssp H-----HHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEE
T ss_pred H-----HHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEE
No 398
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=34.66 E-value=1.8e+02 Score=28.29 Aligned_cols=44 Identities=7% Similarity=0.031 Sum_probs=30.4
Q ss_pred CHHHHHHHhhcCCCceEEEECCC--ChhhHHHHHHHHhhhc-CCcEEE
Q 019107 229 SILECASIADSCEQVVAVGINCT--SPRFIHGLILSVRKVT-SKPVII 273 (346)
Q Consensus 229 ~~~~av~~~~~~~~~~avGvNC~--~p~~~~~~l~~l~~~~-~~pl~v 273 (346)
...+.++.+.+ .++++|-+|++ .+......++.+++.. +.|+++
T Consensus 255 ~~~~~a~~~~~-aG~d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi~ 301 (514)
T 1jcn_A 255 DDKYRLDLLTQ-AGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIG 301 (514)
T ss_dssp THHHHHHHHHH-TTCSEEEECCSCCCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred hhHHHHHHHHH-cCCCEEEeeccCCcchhHHHHHHHHHHhCCCCceEe
Confidence 34555555544 57899998665 5666678888888876 677765
No 399
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=34.64 E-value=2.7e+02 Score=25.38 Aligned_cols=120 Identities=15% Similarity=0.117 Sum_probs=55.9
Q ss_pred CcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC---C------CHHHHHHHHHHH
Q 019107 133 PVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI---P------NKLEAKAYAELL 203 (346)
Q Consensus 133 ~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~---~------~~~E~~a~~~a~ 203 (346)
+.+|-|-+==+.+.+.||..|. +.+.+.+ +++.+.+.|+|+|=+--- | ..+|++-++.++
T Consensus 28 ~~~iMGIlNvTPDSFsdgg~~~-------~~~~a~~----~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI 96 (294)
T 2dqw_A 28 RVRLLGVLNLTPDSFSDGGRYL-------DPERALE----RAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVL 96 (294)
T ss_dssp SCEEEEEEECCC--------------------CCHH----HHHHHHHHTCSEEEEECC-----------CCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCCCCCCCCC-------CHHHHHH----HHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHH
Confidence 3467777766777777775542 3333333 566677799999965532 2 244665555554
Q ss_pred HHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH-hhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCC-CC
Q 019107 204 EEEGITIPAWFSFNSKDGINVVSGDSILECASI-ADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNS-GE 279 (346)
Q Consensus 204 ~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~-~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~-g~ 279 (346)
+.... ..+.+|+.. ... ++++. ++. +++ .||=.+-.....+++-..+ .+.|+++.++. |.
T Consensus 97 ~~l~~-~~vpiSIDT---------~~~-~Va~aAl~a--Ga~--iINdVsg~~d~~m~~v~a~-~~~~vVlmh~~eG~ 158 (294)
T 2dqw_A 97 EAVLS-LGVPVSVDT---------RKP-EVAEEALKL--GAH--LLNDVTGLRDERMVALAAR-HGVAAVVMHMPVPD 158 (294)
T ss_dssp HHHHT-TCSCEEEEC---------SCH-HHHHHHHHH--TCS--EEECSSCSCCHHHHHHHHH-HTCEEEEECCSSSC
T ss_pred HHHHh-CCCeEEEEC---------CCH-HHHHHHHHh--CCC--EEEECCCCCChHHHHHHHH-hCCCEEEEcCCCCC
Confidence 44211 134456622 222 33333 332 333 4566432222334443333 37899999987 64
No 400
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A
Probab=34.59 E-value=2.5e+02 Score=25.97 Aligned_cols=48 Identities=19% Similarity=0.186 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCC--CCEEEEccC-----CCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 168 EFHRRRVLILANSG--ADLIAFETI-----PNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~ET~-----~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
+.+.+.++.|.+.| +|.|=+..- +...+++..++.+.+.| +||+||=.
T Consensus 203 ~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~~~~~~~~~~l~~~a~lG--l~v~iTEl 257 (341)
T 3niy_A 203 NFVYNMIKELKEKGVPVDGIGFQMHIDYRGLNYDSFRRNLERFAKLG--LQIYITEM 257 (341)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCHHHHHHHHHHHHHTT--CEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceEeeeeecCCCCCCHHHHHHHHHHHHHcC--CeEEEEec
Confidence 35567888888877 588755431 24578888898888876 99998853
No 401
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=34.46 E-value=2e+02 Score=23.85 Aligned_cols=90 Identities=12% Similarity=0.045 Sum_probs=49.4
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC--
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-- 251 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~-- 251 (346)
++.+.+.|+|++.+=..+...++..+++.+++.+ +++.+++. +=+++.+.+..+.. .+++.|++--+
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g--~~~gv~~~--------s~~~p~~~~~~~~~-~g~d~v~~~~~~~ 138 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHN--KGVVVDLI--------GIEDKATRAQEVRA-LGAKFVEMHAGLD 138 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHT--CEEEEECT--------TCSSHHHHHHHHHH-TTCSEEEEECCHH
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcC--CceEEEEe--------cCCChHHHHHHHHH-hCCCEEEEEeccc
Confidence 3567779999997655555567777888888876 66545441 11134444444433 25677744322
Q ss_pred ----ChhhHHHHHHHHhhhcCCcEEEee
Q 019107 252 ----SPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 252 ----~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+.......++++... +.|+++-+
T Consensus 139 ~~~~g~~~~~~~i~~~~~~-~~pi~v~G 165 (207)
T 3ajx_A 139 EQAKPGFDLNGLLAAGEKA-RVPFSVAG 165 (207)
T ss_dssp HHTSTTCCTHHHHHHHHHH-TSCEEEES
T ss_pred ccccCCCchHHHHHHhhCC-CCCEEEEC
Confidence 111111444444432 57776654
No 402
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=34.37 E-value=2.5e+02 Score=25.53 Aligned_cols=153 Identities=19% Similarity=0.213 Sum_probs=85.9
Q ss_pred CCeEEEecchHH----------HHHHcCCCCCCCccchhccCCChHHHHHHHHHHHHhhccee--eccccccCHHhH--H
Q 019107 20 GGYSVVDGGFAT----------ELERHGADLNDPLWSAKCLVSSPHLVRKVHLDYLDAGANII--ITASYQATIQGF--E 85 (346)
Q Consensus 20 ~~~lilDGg~gt----------~L~~~G~~~~~~lwsa~~ll~~Pe~V~~iH~~yl~AGA~iI--~TnTy~as~~~l--~ 85 (346)
.-+.|.||+.|+ .|++.|++.- +..+. .-.+.+.++..-..|-++|.+=| .+--.-.....+ .
T Consensus 44 d~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i-~Hltc--~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~ 120 (310)
T 3apt_A 44 AFVSITYGAMGSTRERSVAWAQRIQSLGLNPL-AHLTV--AGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPH 120 (310)
T ss_dssp SEEEECCCSTTCSHHHHHHHHHHHHHTTCCBC-EEEEC--TTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCC
T ss_pred CEEEEecCCCCCcchhHHHHHHHHHHhCCCeE-EEeec--CCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCC
Confidence 458888987664 2333354321 22221 12588899999999999998822 222221100000 0
Q ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHH
Q 019107 86 AKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISSRPVLVAASVGSYGAYLADGSEYSGDYGDAVSLET 165 (346)
Q Consensus 86 ~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e 165 (346)
..|+. .|++|.+-+++.+. ....|.+..=|-|- +.. .+.+.
T Consensus 121 ~~~f~---------~a~~Lv~~ir~~~g------------------~~f~igvA~yPE~H----------p~~--~~~~~ 161 (310)
T 3apt_A 121 PEGFR---------YAAELVALIRERYG------------------DRVSVGGAAYPEGH----------PES--ESLEA 161 (310)
T ss_dssp TTSCS---------SHHHHHHHHHHHHG------------------GGSEEEEEECTTCC----------TTS--SCHHH
T ss_pred CCCCC---------CHHHHHHHHHHhCC------------------CCeEEEEEeCCCcC----------CCC--CCHHH
Confidence 01232 12333333333211 12345554444332 111 24444
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEE
Q 019107 166 LKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNS 218 (346)
Q Consensus 166 ~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~ 218 (346)
-.++.++.+ ++|+|+++=--+.+.+-....++.+++.|.+.|++..+..
T Consensus 162 d~~~Lk~Kv----~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImP 210 (310)
T 3apt_A 162 DLRHFKAKV----EAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMP 210 (310)
T ss_dssp HHHHHHHHH----HHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECC
T ss_pred HHHHHHHHH----HcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecc
Confidence 444444443 4899999988888999999999999988888999999974
No 403
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=34.24 E-value=2.9e+02 Score=25.78 Aligned_cols=148 Identities=10% Similarity=0.020 Sum_probs=80.1
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC-CCHHHHHHHHHHHHHh-CCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI-PNKLEAKAYAELLEEE-GITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-~~~~E~~a~~~a~~~~-~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
+.+++. ++++.+.+.|.|.|=+-.- +++.+....++++++. +.+.++.+-. ..|.++.++++.++.
T Consensus 175 ~~e~~~----~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~avG~d~~l~vDa--------n~~~~~~~ai~~~~~ 242 (398)
T 2pp0_A 175 PLDQVL----KNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREALGDEFPLMVDA--------NQQWDRETAIRMGRK 242 (398)
T ss_dssp CHHHHH----HHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHHCSSSCEEEEC--------TTCSCHHHHHHHHHH
T ss_pred CHHHHH----HHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHcCCCCeEEEEC--------CCCCCHHHHHHHHHH
Confidence 555543 3455566678777754321 3677778888888874 6567776533 246678888776643
Q ss_pred C--CCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccc-cccccccC-----CCCh------HHHHHHHHH
Q 019107 240 C--EQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE-LKKWVEST-----GVRD------EDFVSYIGK 305 (346)
Q Consensus 240 ~--~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~-~~~~~~~~-----~~~~------~~~~~~~~~ 305 (346)
. .++..|==-| .++. ...+..+++..+.|+++-=+ .++.. ........ .+.+ .+..+.+..
T Consensus 243 l~~~~i~~iEqP~-~~~d-~~~~~~l~~~~~iPIa~dE~---~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~ 317 (398)
T 2pp0_A 243 MEQFNLIWIEEPL-DAYD-IEGHAQLAAALDTPIATGEM---LTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDL 317 (398)
T ss_dssp HGGGTCSCEECCS-CTTC-HHHHHHHHHHCSSCEEECTT---CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHH
T ss_pred HHHcCCceeeCCC-Chhh-HHHHHHHHhhCCCCEEecCC---cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHH
Confidence 2 2343332222 2333 34456666667888765321 12111 01111110 1122 234455555
Q ss_pred HHHcCCeEEeecCCCchHHHH
Q 019107 306 WRDAGASLFGGCCRTTPNTIK 326 (346)
Q Consensus 306 ~~~~G~~ivGGCCGt~P~hI~ 326 (346)
....|+.++.+||+.+.-|+.
T Consensus 318 A~~~gi~~~~h~~~~~~~~la 338 (398)
T 2pp0_A 318 AAKHGRKLAPHFAMEVHLHLS 338 (398)
T ss_dssp HHHTTCEECCCSCHHHHHHHH
T ss_pred HHHcCCeEeecCccHHHHHHH
Confidence 567899999999876644443
No 404
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=34.17 E-value=2.6e+02 Score=25.84 Aligned_cols=104 Identities=14% Similarity=0.178 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHHHHh----------CCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCH
Q 019107 161 VSLETLKEFHRRRVLILAN----------SGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSI 230 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~----------~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~ 230 (346)
++.+|+...... +..|.+ .+.=..+|| =||...=...--++++.| ..++.+.|.. +..+.-|+++
T Consensus 16 ls~~ei~~ll~~-A~~lk~~~~~~~~~L~gk~la~lF~-e~STRTR~SFE~A~~~LG-g~~i~~~l~~--~ss~~kgEsl 90 (328)
T 3grf_A 16 LCPKELAYLIDR-ALDMKKNPAKYTARAANKTLLAFFA-KPSLRTRVSLETAMTRLG-GHAIYYELGA--NSNVGGKETV 90 (328)
T ss_dssp SCHHHHHHHHHH-HHHHHHCGGGGTTTTTTCEEEEEES-SCCHHHHHHHHHHHHHHT-CEEEEEEC------------CH
T ss_pred CCHHHHHHHHHH-HHHHHhhhhccCcccCCCEEEEEec-CCCchHHHHHHHHHHHCC-CeEEccccCc--cccCCCCCCH
Confidence 577887765543 222221 111123344 367766444445567777 3444422443 4556689999
Q ss_pred HHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 231 LECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 231 ~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
.|.++.+.. . +++|.+=.... ..++.+.++.+.|++ |+|
T Consensus 91 ~DTarvls~-~-~D~iviR~~~~----~~~~~lA~~~~vPVI---Nag 129 (328)
T 3grf_A 91 QDTAEVFSR-M-VDICTARLATK----EMMREMAQHASVPCI---NAL 129 (328)
T ss_dssp HHHHHHHTT-T-CSEEEEECSSH----HHHHHHHHHCSSCEE---ESS
T ss_pred HHHHHHHHh-h-CCEEEEecCCh----hHHHHHHHhCCCCEE---eCC
Confidence 999999864 3 79999888764 344555666788963 665
No 405
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=34.14 E-value=2.2e+02 Score=26.24 Aligned_cols=85 Identities=11% Similarity=-0.021 Sum_probs=49.3
Q ss_pred CCceEEEECCC-ChhhHHHHHHHHhhhc--CCcEEEeeCCCCcccc-----------ccccccccCCCChHHHHHHHHHH
Q 019107 241 EQVVAVGINCT-SPRFIHGLILSVRKVT--SKPVIIYPNSGETYNA-----------ELKKWVESTGVRDEDFVSYIGKW 306 (346)
Q Consensus 241 ~~~~avGvNC~-~p~~~~~~l~~l~~~~--~~pl~vypN~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 306 (346)
.+..++-+++. +++.....++.+++.. +.+|.+-.|.+-..+. -.- |.+.. +. ++.. .++.
T Consensus 160 ~Gf~~iKik~g~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~P-~~--~~~~-~~~l 234 (371)
T 2ps2_A 160 KGYKGQSVKISGEPVTDAKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALEAP-CA--TWRE-CISL 234 (371)
T ss_dssp TTCCEEEEECCSCHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEECC-BS--SHHH-HHHH
T ss_pred hChheEEeecCCCHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcCC-cC--CHHH-HHHH
Confidence 47788889987 4666777888888764 5789999997621110 001 33321 11 2221 2223
Q ss_pred H-HcCCeEEeecCCCchHHHHHHHH
Q 019107 307 R-DAGASLFGGCCRTTPNTIKAISR 330 (346)
Q Consensus 307 ~-~~G~~ivGGCCGt~P~hI~al~~ 330 (346)
. ..++.|+++=.=+++++++.+-+
T Consensus 235 ~~~~~iPI~~dE~~~~~~~~~~~i~ 259 (371)
T 2ps2_A 235 RRKTDIPIIYDELATNEMSIVKILA 259 (371)
T ss_dssp HTTCCSCEEESTTCCSHHHHHHHHH
T ss_pred HhhCCCCEEeCCCcCCHHHHHHHHH
Confidence 2 23677776655578887776643
No 406
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=34.13 E-value=75 Score=27.65 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=26.4
Q ss_pred HHHHHhCCCCEEEEccC--CCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 174 VLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
++.+.++|+|.+.+=-- +. ++....++.+++.+ +.+.+++
T Consensus 78 i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g--~~~gv~~ 119 (230)
T 1tqj_A 78 VEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELG--KKAGAVL 119 (230)
T ss_dssp HHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcC--CcEEEEE
Confidence 55677789999954322 22 34566777778766 6677666
No 407
>2wx3_A MRNA-decapping enzyme 1A; structural protein, trimerization module, P-BODY component, asymmetric assembly; 2.31A {Homo sapiens}
Probab=34.10 E-value=20 Score=24.08 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=15.1
Q ss_pred CCChHHHHHHHHHHHHh
Q 019107 51 VSSPHLVRKVHLDYLDA 67 (346)
Q Consensus 51 l~~Pe~V~~iH~~yl~A 67 (346)
-++++.|.+||+.|+..
T Consensus 25 qnD~~Fl~~IHeAYl~s 41 (51)
T 2wx3_A 25 KNDSSFLSTLHEVYLQV 41 (51)
T ss_dssp HHCHHHHHHHHHHHHHT
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 36899999999999986
No 408
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=33.98 E-value=2.4e+02 Score=24.59 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=17.2
Q ss_pred hhhHHHHHHHHhhhcCCcEEE--eeC
Q 019107 253 PRFIHGLILSVRKVTSKPVII--YPN 276 (346)
Q Consensus 253 p~~~~~~l~~l~~~~~~pl~v--ypN 276 (346)
++....+++++++..+.|+++ |.|
T Consensus 79 ~~~~~~~i~~ir~~~~~Pv~~m~~~~ 104 (262)
T 1rd5_A 79 MDAVLEMLREVTPELSCPVVLLSYYK 104 (262)
T ss_dssp HHHHHHHHHHHGGGCSSCEEEECCSH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecCc
Confidence 455667788888777889876 555
No 409
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=33.86 E-value=24 Score=26.35 Aligned_cols=43 Identities=26% Similarity=0.458 Sum_probs=30.3
Q ss_pred HHHHHHHHhhhcCCc----EEEeeCCCCccccccccccccCCCChHHHHHHHHHHHH-cCC
Q 019107 256 IHGLILSVRKVTSKP----VIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRD-AGA 311 (346)
Q Consensus 256 ~~~~l~~l~~~~~~p----l~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~ 311 (346)
+..+|..+.+.+.-| |+.||+.+. ..+|+..++.+++|+. .|-
T Consensus 32 ~d~ll~~f~~~teHP~gSDLIfyP~~~~-------------e~spE~Iv~~ik~wRa~~g~ 79 (85)
T 1gxg_A 32 QDDNLEHFISVTEHPSGSDLIYYPEGNN-------------DGSPEAVIKEIKEWRAANGK 79 (85)
T ss_dssp HHHHHHHHHHTTCCTTTTHHHHSCCTTC-------------CSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCCcCceeecCCCCC-------------CCCHHHHHHHHHHHHHHcCC
Confidence 677777777665444 677776642 1569999999999985 453
No 410
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=33.84 E-value=2.3e+02 Score=24.31 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=44.1
Q ss_pred HHHHHHhCCCCEEEEccCC----CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 173 RVLILANSGADLIAFETIP----NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~----~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.++.+.++|+|.|.+=.+. ........++.+++. .+.|+++.--+ .++.++-..+. .++++|.+
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~ipvi~~ggI---------~~~~~~~~~~~--~Gad~V~l 102 (253)
T 1thf_D 35 LGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-IDIPFTVGGGI---------HDFETASELIL--RGADKVSI 102 (253)
T ss_dssp HHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CCSCEEEESSC---------CSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh-CCCCEEEeCCC---------CCHHHHHHHHH--cCCCEEEE
Confidence 4466778999988643332 122222333444443 25899875422 23455444443 36888888
Q ss_pred CCC---ChhhHHHHHHHH
Q 019107 249 NCT---SPRFIHGLILSV 263 (346)
Q Consensus 249 NC~---~p~~~~~~l~~l 263 (346)
... .|+.+..+++.+
T Consensus 103 g~~~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 103 NTAAVENPSLITQIAQTF 120 (253)
T ss_dssp SHHHHHCTHHHHHHHHHH
T ss_pred ChHHHhChHHHHHHHHHc
Confidence 774 456566666554
No 411
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A
Probab=33.71 E-value=94 Score=28.25 Aligned_cols=50 Identities=18% Similarity=0.112 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCC--CCEEEEcc---CCCHHHHHHHHHHHHHhCCCC-cEEEE-EEEc
Q 019107 168 EFHRRRVLILANSG--ADLIAFET---IPNKLEAKAYAELLEEEGITI-PAWFS-FNSK 219 (346)
Q Consensus 168 ~~~~~~i~~l~~~g--vD~i~~ET---~~~~~E~~a~~~a~~~~~~~~-pv~is-~~~~ 219 (346)
+.+...++.|.+.| +|.|-++. .+...+++..++.+.+.| + ||||| +.+.
T Consensus 185 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~~~~~~l~~~a~~G--~~pi~iTEldi~ 241 (303)
T 1i1w_A 185 QAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAG--TPEVAITELDVA 241 (303)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTTHHHHHHHHHHHHTTC--CSEEEEEEEEET
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCHHHHHHHHHHHHHCC--CCeEEEEeCCcc
Confidence 44556777777777 59987765 455677888888887766 8 99998 5554
No 412
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=33.35 E-value=1.5e+02 Score=26.41 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E 188 (346)
-+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 54 ~s~~~i~~~~~~~~~~L~~~g~d~ivia 81 (273)
T 2oho_A 54 RPKKQIKEYTWELVNFLLTQNVKMIVFA 81 (273)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 3778999999999999999999999864
No 413
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=33.29 E-value=1.3e+02 Score=26.53 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHH----HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLE----AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASI 236 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E----~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~ 236 (346)
++.+++.+.|++ + ....|++++|+...+.+ -....++++..+ .||++-..... | ++.+++..
T Consensus 116 i~~~~I~~~~~~----l-~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~--~pVILV~~~~l------g-~i~~~~lt 181 (242)
T 3qxc_A 116 IDTDNLTQRLHN----F-TKTYDLVIVEGAGGLCVPITLEENMLDFALKLK--AKMLLISHDNL------G-LINDCLLN 181 (242)
T ss_dssp CCHHHHHHHHHH----G-GGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHT--CEEEEEECCST------T-HHHHHHHH
T ss_pred CCHHHHHHHHHH----H-HhcCCEEEEECCCCccccccccchHHHHHHHcC--CCEEEEEcCCC------c-HHHHHHHH
Confidence 467777776654 3 25789999999654432 223456677765 89987664431 2 45544433
Q ss_pred h---hc-CCCceEEEECCCChh
Q 019107 237 A---DS-CEQVVAVGINCTSPR 254 (346)
Q Consensus 237 ~---~~-~~~~~avGvNC~~p~ 254 (346)
+ .. ... .++=+|+..++
T Consensus 182 ~~~l~~~g~~-~GvIlN~v~~~ 202 (242)
T 3qxc_A 182 DFLLKSHQLD-YKIAINLKGNN 202 (242)
T ss_dssp HHHHHTSSSC-EEEEECCCTTC
T ss_pred HHHHHhCCCC-EEEEEeCCCCc
Confidence 3 22 234 77889998543
No 414
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=33.15 E-value=1.8e+02 Score=29.09 Aligned_cols=48 Identities=15% Similarity=0.257 Sum_probs=32.8
Q ss_pred HHHHHHHHHhCCCCEEEEccCC-CHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 170 HRRRVLILANSGADLIAFETIP-NKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET~~-~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
..+++++|.++|||+|++.|-. +-.-..-.++.+++...++|++..=.
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNV 330 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNV 330 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccc
Confidence 4568999999999999998643 33334445556666544688876543
No 415
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=33.05 E-value=2.1e+02 Score=25.50 Aligned_cols=97 Identities=19% Similarity=0.192 Sum_probs=51.0
Q ss_pred ccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEE--eeCCCCccccc--cc-------cccccC
Q 019107 224 VVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII--YPNSGETYNAE--LK-------KWVEST 292 (346)
Q Consensus 224 l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~v--ypN~g~~~~~~--~~-------~~~~~~ 292 (346)
+.||..+.++.....+ |++..+.+..+++++++. .|+++ |-|--..|... .. +..--.
T Consensus 55 ~aDGpvIq~a~~rAL~---------~g~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~Iip 123 (252)
T 3tha_A 55 IADGEIIADAAKIALD---------QGVDIHSVFELLARIKTK--KALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVP 123 (252)
T ss_dssp CSCCCHHHHHHHHHHH---------TTCCHHHHHHHHHHCCCS--SEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECT
T ss_pred CCCcHHHHHHHHHHHH---------CCCCHHHHHHHHHHHhcC--CCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeC
Confidence 3588888877766543 234567777777777643 67655 66631111000 00 000001
Q ss_pred CCChHHHHHHHHHHHHcCCeEEeecCCCc-hHHHHHHHHH
Q 019107 293 GVRDEDFVSYIGKWRDAGASLFGGCCRTT-PNTIKAISRV 331 (346)
Q Consensus 293 ~~~~~~~~~~~~~~~~~G~~ivGGCCGt~-P~hI~al~~~ 331 (346)
.+.+++-.++.+...+.|...|==|--+| ++-|+++++.
T Consensus 124 DLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~ 163 (252)
T 3tha_A 124 ELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKH 163 (252)
T ss_dssp TCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHh
Confidence 24455555555566667776666565554 4555555544
No 416
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=32.84 E-value=58 Score=29.63 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=24.7
Q ss_pred HHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
|.+++..++++|.+++ +|- ..+++|++.+++++++.+ +++++.+
T Consensus 85 H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~ 130 (312)
T 3o9z_A 85 HYPQIRMALRLGANAL-SEKPLVLWPEEIARLKELEARTG--RRVYTVL 130 (312)
T ss_dssp HHHHHHHHHHTTCEEE-ECSSSCSCHHHHHHHHHHHHHHC--CCEEECC
T ss_pred hHHHHHHHHHCCCeEE-EECCCCCCHHHHHHHHHHHHHcC--CEEEEEe
Confidence 5555666666665544 352 346666666666666654 5554444
No 417
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=32.80 E-value=1.1e+02 Score=29.43 Aligned_cols=75 Identities=16% Similarity=0.144 Sum_probs=44.5
Q ss_pred HHHHHhhcCCCceEEEECCCC---------h------------------hhHHHHHHHHhhhc------CCcEEEeeCCC
Q 019107 232 ECASIADSCEQVVAVGINCTS---------P------------------RFIHGLILSVRKVT------SKPVIIYPNSG 278 (346)
Q Consensus 232 ~av~~~~~~~~~~avGvNC~~---------p------------------~~~~~~l~~l~~~~------~~pl~vypN~g 278 (346)
+|+..+.. .+.++|=|||.+ | ..+..+++.++++. +.|+++.-+..
T Consensus 174 ~AA~rA~~-AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~ 252 (419)
T 3l5a_A 174 DATLRAIK-AGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPE 252 (419)
T ss_dssp HHHHHHHH-TTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSC
T ss_pred HHHHHHHH-cCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccc
Confidence 33433333 588999999875 3 12344555665543 45788877664
Q ss_pred CccccccccccccCCCChHHHHHHHHHHHH-cCCeEE
Q 019107 279 ETYNAELKKWVESTGVRDEDFVSYIGKWRD-AGASLF 314 (346)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~iv 314 (346)
+..++. .+.+.+++.+.++.+.+ .|+.+|
T Consensus 253 ~~~~~~-------~G~~~ed~~~la~~L~~~~Gvd~I 282 (419)
T 3l5a_A 253 ETRGSD-------LGYTIDEFNQLIDWVMDVSNIQYL 282 (419)
T ss_dssp EEETTE-------EEECHHHHHHHHHHHHHHSCCCCE
T ss_pred cccCCC-------CCCCHHHHHHHHHHHHhhcCCcEE
Confidence 321110 01346778888888888 886654
No 418
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=32.68 E-value=3e+02 Score=25.40 Aligned_cols=143 Identities=10% Similarity=-0.048 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC-------CCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI-------PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~-------~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
+.+++.+ +++.+.+.|.|.+=+=.- +++++....++++++ .+.+.++.+-. ..|.++.++
T Consensus 149 ~~e~~~~----~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDa--------n~~~~~~~a 216 (382)
T 1rvk_A 149 TPEDYGR----FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDA--------FHWYSRTDA 216 (382)
T ss_dssp SHHHHHH----HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEEC--------CTTCCHHHH
T ss_pred CHHHHHH----HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEEC--------CCCCCHHHH
Confidence 5555443 455555667777644321 267877888888887 45456766533 146678888
Q ss_pred HHHhhc--CCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccc-cc-cccccccCC-----CC------hHH
Q 019107 234 ASIADS--CEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYN-AE-LKKWVESTG-----VR------DED 298 (346)
Q Consensus 234 v~~~~~--~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~-~~-~~~~~~~~~-----~~------~~~ 298 (346)
++.++. ..++..+==-| .++. ...++.+++..+.|+++-=+ .++ .. ......... +. ..+
T Consensus 217 ~~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~iPIa~dE~---~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~ 291 (382)
T 1rvk_A 217 LALGRGLEKLGFDWIEEPM-DEQS-LSSYKWLSDNLDIPVVGPES---AAGKHWHRAEWIKAGACDILRTGVNDVGGITP 291 (382)
T ss_dssp HHHHHHHHTTTCSEEECCS-CTTC-HHHHHHHHHHCSSCEEECSS---CSSHHHHHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred HHHHHHHHhcCCCEEeCCC-Chhh-HHHHHHHHhhCCCCEEEeCC---ccCcHHHHHHHHHcCCCCEEeeCchhcCCHHH
Confidence 776532 13454443222 2333 34456666667889876322 222 11 111111110 11 233
Q ss_pred HHHHHHHHHHcCCeEEeecCCCc
Q 019107 299 FVSYIGKWRDAGASLFGGCCRTT 321 (346)
Q Consensus 299 ~~~~~~~~~~~G~~ivGGCCGt~ 321 (346)
+.+.+......|+.+.-||++++
T Consensus 292 ~~~i~~~A~~~g~~~~~~~~~~~ 314 (382)
T 1rvk_A 292 ALKTMHLAEAFGMECEVHGNTAM 314 (382)
T ss_dssp HHHHHHHHHHTTCCEEECCCSHH
T ss_pred HHHHHHHHHHcCCeEeecCCCCH
Confidence 45555556678999988866655
No 419
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=32.58 E-value=1.4e+02 Score=22.39 Aligned_cols=77 Identities=12% Similarity=0.029 Sum_probs=42.1
Q ss_pred HhCCCCEEEEccC-CCH-HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhh
Q 019107 178 ANSGADLIAFETI-PNK-LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRF 255 (346)
Q Consensus 178 ~~~gvD~i~~ET~-~~~-~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~ 255 (346)
.+..+|+++++.. |.- .....+++.+++.....|+++-- .-.+.......+. .+++.+-.-=..++.
T Consensus 47 ~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s---------~~~~~~~~~~~~~--~ga~~~l~KP~~~~~ 115 (136)
T 3kto_A 47 ISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMA---------SSSDIPTAVRAMR--ASAADFIEKPFIEHV 115 (136)
T ss_dssp CCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEE---------SSCCHHHHHHHHH--TTCSEEEESSBCHHH
T ss_pred hccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEE---------cCCCHHHHHHHHH--cChHHheeCCCCHHH
Confidence 3456899998843 430 33445566666655467776433 1123344444443 366776665555666
Q ss_pred HHHHHHHHhh
Q 019107 256 IHGLILSVRK 265 (346)
Q Consensus 256 ~~~~l~~l~~ 265 (346)
+...++.+..
T Consensus 116 l~~~i~~~~~ 125 (136)
T 3kto_A 116 LVHDVQQIIN 125 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666555443
No 420
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=32.58 E-value=63 Score=29.59 Aligned_cols=46 Identities=13% Similarity=0.207 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.|.+.+..++++|..++ +|- -.+++|++.+++++++.+ +++++.+.
T Consensus 93 ~H~~~~~~al~aGkhVl-~EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~~ 140 (330)
T 4ew6_A 93 YRYEAAYKALVAGKHVF-LEKPPGATLSEVADLEALANKQG--ASLFASWH 140 (330)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--CCEEECCG
T ss_pred HHHHHHHHHHHcCCcEE-EeCCCCCCHHHHHHHHHHHHhcC--CeEEEEeh
Confidence 46777777777786665 574 347788888888887766 66665553
No 421
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=32.48 E-value=71 Score=28.67 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.|.+++..++++|..+++ |- -.+++|++.+++++++.+ +++++.+.
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~~~~~~~ 124 (294)
T 1lc0_A 77 SHEDYIRQFLQAGKHVLV-EYPMTLSFAAAQELWELAAQKG--RVLHEEHV 124 (294)
T ss_dssp GHHHHHHHHHHTTCEEEE-ESCSCSCHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHhC--CEEEEEEh
Confidence 477888888888887654 83 347889999999888866 66766653
No 422
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=32.38 E-value=2.9e+02 Score=25.17 Aligned_cols=22 Identities=14% Similarity=0.336 Sum_probs=17.2
Q ss_pred HHHhCCCCEEEEccCCCHHHHH
Q 019107 176 ILANSGADLIAFETIPNKLEAK 197 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~ 197 (346)
.+.+.|+|.+-++.-.++.+++
T Consensus 262 ~l~~~g~d~~~~d~~~d~~~~~ 283 (353)
T 1j93_A 262 RLPLTGVDVVSLDWTVDMADGR 283 (353)
T ss_dssp GGGGGCCSEEECCTTSCHHHHH
T ss_pred HHHhcCCCEEEeCCCCCHHHHH
Confidence 4557899999999777887754
No 423
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=32.23 E-value=65 Score=29.93 Aligned_cols=50 Identities=16% Similarity=0.087 Sum_probs=34.3
Q ss_pred HHHHHHHhCCCCEEEEccCCC---HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc
Q 019107 172 RRVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSFNSKDGIN 223 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~---~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~ 223 (346)
+.++.+.+.|++.|++|++.. ..++..+++.+.+.+ +||+++-.|.....
T Consensus 232 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~G--i~VV~~Sr~~~G~v 284 (327)
T 1o7j_A 232 YLYDAAIQHGVKGIVYAGMGAGSVSVRGIAGMRKALEKG--VVVMRSTRTGNGIV 284 (327)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTT--CEEEEEESSSBSCB
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCC--ceEEEECCCCCCCc
Confidence 356677778999999998864 245555555455544 99998887765544
No 424
>2wx4_A DCP1, decapping protein 1; asymmetric assembly, trimerization module, mRNA decapping, P-BODY component, structural protein; 2.80A {Drosophila melanogaster}
Probab=32.17 E-value=15 Score=24.22 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=13.8
Q ss_pred CChHHHHHHHHHHHHh
Q 019107 52 SSPHLVRKVHLDYLDA 67 (346)
Q Consensus 52 ~~Pe~V~~iH~~yl~A 67 (346)
++++.|.++|+.|+..
T Consensus 24 nD~~Fl~~iHeAYl~s 39 (46)
T 2wx4_A 24 NDKEFANKLHKAYLNG 39 (46)
T ss_dssp HCTTHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHHHH
Confidence 6889999999999975
No 425
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=32.15 E-value=2.5e+02 Score=25.74 Aligned_cols=104 Identities=15% Similarity=0.184 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCC-CC-------EEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHH
Q 019107 161 VSLETLKEFHRRRVLILANSG-AD-------LIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~g-vD-------~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
++.+|+...... +..|.+.. .+ ..+|| =||...=...-.++++.| ..++. |. ..+..+.-|+++.|
T Consensus 10 ls~~ei~~ll~~-A~~lk~~~~~~~L~gk~la~lF~-e~STRTR~SFE~A~~~LG-g~~i~--l~-~~~ss~~kgEsl~D 83 (304)
T 3r7f_A 10 LSTEEIKDLLQT-AQELKSGKTDNQLTGKFAANLFF-EPSTRTRFSFEVAEKKLG-MNVLN--LD-GTSTSVQKGETLYD 83 (304)
T ss_dssp SCHHHHHHHHHH-HHHHHTTCCCCTTTTCEEEEEES-SCCSHHHHHHHHHHHHTT-CEEEE--EE-TTSTTSCSSSCHHH
T ss_pred CCHHHHHHHHHH-HHHHHcCCCCccCCCCEEEEEec-CCChhHHHhHHHHHHHCC-CeEEE--EC-cccccCCCCCCHHH
Confidence 577888776543 33343211 12 22444 255554333344567776 33333 32 34455678999999
Q ss_pred HHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCC
Q 019107 233 CASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSG 278 (346)
Q Consensus 233 av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g 278 (346)
.++.+.. .++++|.+=+.....+..+ .++.+.|+ -|+|
T Consensus 84 TarvLs~-~~~D~iviR~~~~~~~~~l----a~~~~vPV---INag 121 (304)
T 3r7f_A 84 TIRTLES-IGVDVCVIRHSEDEYYEEL----VSQVNIPI---LNAG 121 (304)
T ss_dssp HHHHHHH-HTCCEEEEECSSTTCHHHH----HHHCSSCE---EESC
T ss_pred HHHHHHH-hcCCEEEEecCChhHHHHH----HHhCCCCE---EeCC
Confidence 9999865 4689999998765544433 45567896 3665
No 426
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=32.15 E-value=1.7e+02 Score=22.29 Aligned_cols=73 Identities=8% Similarity=0.023 Sum_probs=36.7
Q ss_pred hCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHH
Q 019107 179 NSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIH 257 (346)
Q Consensus 179 ~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~ 257 (346)
+...|+++++.. +.. +...+++.+++.....|+++-. . ..+.......+. .+++.+-.-=..++.+.
T Consensus 59 ~~~~dlii~d~~l~~~-~g~~~~~~l~~~~~~~~ii~~s-~--------~~~~~~~~~~~~--~g~~~~l~Kp~~~~~l~ 126 (152)
T 3eul_A 59 AHLPDVALLDYRMPGM-DGAQVAAAVRSYELPTRVLLIS-A--------HDEPAIVYQALQ--QGAAGFLLKDSTRTEIV 126 (152)
T ss_dssp HHCCSEEEEETTCSSS-CHHHHHHHHHHTTCSCEEEEEE-S--------CCCHHHHHHHHH--TTCSEEEETTCCHHHHH
T ss_pred hcCCCEEEEeCCCCCC-CHHHHHHHHHhcCCCCeEEEEE-c--------cCCHHHHHHHHH--cCCCEEEecCCCHHHHH
Confidence 346788888743 433 3344555566654456655432 1 122233344443 35666655544455555
Q ss_pred HHHHHH
Q 019107 258 GLILSV 263 (346)
Q Consensus 258 ~~l~~l 263 (346)
..++.+
T Consensus 127 ~~i~~~ 132 (152)
T 3eul_A 127 KAVLDC 132 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 427
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=32.10 E-value=1.6e+02 Score=26.42 Aligned_cols=29 Identities=10% Similarity=0.141 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEcc
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFET 189 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET 189 (346)
-+.+++.++..+.++.|.+.|+|+|++=.
T Consensus 66 ~s~~~i~~~~~~~~~~L~~~g~d~IVIAC 94 (290)
T 2vvt_A 66 RPAEQVVQFTWEMADFLLKKRIKMLVIAC 94 (290)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 47899999999999999999999998654
No 428
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=32.05 E-value=2.9e+02 Score=24.97 Aligned_cols=152 Identities=18% Similarity=0.078 Sum_probs=84.3
Q ss_pred ChHHHHHHHHHHHHhhcceeec-cccccCHHhHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIIT-ASYQATIQGFEAKGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGRISS 131 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~T-nTy~as~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~~~~ 131 (346)
+.+.+++.-+.++++|++-|.. -|-+-. . -++.++-.++.+.+++.+ .+
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~-~-----~Ls~~Er~~v~~~~~~~~------------------------~g 84 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGES-P-----TTTAAEKLELLKAVREEV------------------------GD 84 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTT-T-----TSCHHHHHHHHHHHHHHH------------------------TT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCh-h-----hCCHHHHHHHHHHHHHHh------------------------CC
Confidence 5678888888899999995543 333211 1 234455556666665443 12
Q ss_pred CCcEEEEecCCccCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccC----CCHHHHHHHHHHHHHhC
Q 019107 132 RPVLVAASVGSYGAYLADGSEYSGDYGDAVSLETLKEFHRRRVLILANSGADLIAFETI----PNKLEAKAYAELLEEEG 207 (346)
Q Consensus 132 ~~~~VaGsiGP~g~~l~~g~eY~g~~~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----~~~~E~~a~~~a~~~~~ 207 (346)
+-.+|+| +|. .+.++..+ +++...+.|+|.+++=+= |+.+++..-.+.+.+..
T Consensus 85 rvpviaG-vg~------------------~st~~ai~----la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~ 141 (304)
T 3cpr_A 85 RAKLIAG-VGT------------------NNTRTSVE----LAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAAT 141 (304)
T ss_dssp TSEEEEE-CCC------------------SCHHHHHH----HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CCcEEec-CCC------------------CCHHHHHH----HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3456777 222 14455544 455667789999987542 46677777777666643
Q ss_pred CCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHH
Q 019107 208 ITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILS 262 (346)
Q Consensus 208 ~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~ 262 (346)
++|+++==. ..++--.-+.+...+.+ +.+++.+|=--|.....+..+++.
T Consensus 142 -~lPiilYn~---P~~tg~~l~~~~~~~La-~~pnIvgiKdssgd~~~~~~~~~~ 191 (304)
T 3cpr_A 142 -EVPICLYDI---PGRSGIPIESDTMRRLS-ELPTILAVXDAKGDLVAATSLIKE 191 (304)
T ss_dssp -CSCEEEEEC---HHHHSSCCCHHHHHHHT-TSTTEEEEEECSCCHHHHHHHHHH
T ss_pred -CCCEEEEeC---ccccCcCCCHHHHHHHH-cCCCEEEEecCCCCHHHHHHHHHh
Confidence 599885321 11211123444444443 334444444444445555555543
No 429
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=31.99 E-value=1.2e+02 Score=26.05 Aligned_cols=86 Identities=17% Similarity=0.123 Sum_probs=46.7
Q ss_pred HHHHHhCCCCEE--EEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCC--CceEEEEC
Q 019107 174 VLILANSGADLI--AFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCE--QVVAVGIN 249 (346)
Q Consensus 174 i~~l~~~gvD~i--~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~--~~~avGvN 249 (346)
++.+.+.|+|.+ -.|..+.. +...++.+++.+ +++++++.. .+++ +.+..+.. . +++.|++-
T Consensus 80 i~~~~~agad~v~vH~~~~~~~--~~~~~~~i~~~g--~~igv~~~p--------~t~~-e~~~~~~~-~~~~~d~vl~~ 145 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVSRDN--WQELIQSIKAKG--MRPGVSLRP--------GTPV-EEVFPLVE-AENPVELVLVM 145 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGCTTT--HHHHHHHHHHTT--CEEEEEECT--------TSCG-GGGHHHHH-SSSCCSEEEEE
T ss_pred HHHHHHcCCCEEEECCCCcccH--HHHHHHHHHHcC--CCEEEEEeC--------CCCH-HHHHHHHh-cCCCCCEEEEE
Confidence 455666899999 55654432 145566667755 888866622 1222 22332222 1 45666663
Q ss_pred CCC--------hhhHHHHHHHHhhhc-CCcEEE
Q 019107 250 CTS--------PRFIHGLILSVRKVT-SKPVII 273 (346)
Q Consensus 250 C~~--------p~~~~~~l~~l~~~~-~~pl~v 273 (346)
... +......++++++.. +.|+.+
T Consensus 146 sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v 178 (228)
T 1h1y_A 146 TVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV 178 (228)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE
T ss_pred eecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE
Confidence 321 234455667777665 567654
No 430
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=31.94 E-value=1.8e+02 Score=28.64 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHHHHHhCC---CCEEEEccCCCHHHHHHHHHHH
Q 019107 162 SLETLKEFHRRRVLILANSG---ADLIAFETIPNKLEAKAYAELL 203 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~g---vD~i~~ET~~~~~E~~a~~~a~ 203 (346)
..+++++.-++.++.|.+.+ +.++.-.++.+.+|++.+++.+
T Consensus 23 ~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~ 67 (500)
T 4f2d_A 23 TLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDA 67 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHh
Confidence 55666655555555555432 4555555666666655555544
No 431
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=31.79 E-value=3.2e+02 Score=25.40 Aligned_cols=150 Identities=12% Similarity=0.079 Sum_probs=80.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC------------------CCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCC
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI------------------PNKLEAKAYAELLEE-EGITIPAWFSFNSKDGI 222 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~------------------~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~ 222 (346)
+.+++.+ +++.+.+.|.|.+=+-.- +++.+...+++++++ .+.+.++.+-.
T Consensus 137 ~~~~~~~----~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~------ 206 (392)
T 2poz_A 137 TPDEFAR----AVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDL------ 206 (392)
T ss_dssp SHHHHHH----HTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC------
T ss_pred CHHHHHH----HHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEEC------
Confidence 5555433 455556678777643321 345666777788877 45456766533
Q ss_pred cccCCCCHHHHHHHhhcC--CCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccc-cccccccC-----CC
Q 019107 223 NVVSGDSILECASIADSC--EQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAE-LKKWVEST-----GV 294 (346)
Q Consensus 223 ~l~~G~~~~~av~~~~~~--~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~-~~~~~~~~-----~~ 294 (346)
..|.++.++++.++.. .++..+==-| .++. ...++.+++..+.|+++-=+ +++.. ........ .+
T Consensus 207 --n~~~~~~~a~~~~~~l~~~~i~~iE~P~-~~~~-~~~~~~l~~~~~ipIa~dE~---~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 207 --SGGLTTDETIRFCRKIGELDICFVEEPC-DPFD-NGALKVISEQIPLPIAVGER---VYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp --TTCSCHHHHHHHHHHHGGGCEEEEECCS-CTTC-HHHHHHHHHHCSSCEEECTT---CCHHHHHHHHHTTTCCSEECC
T ss_pred --CCCCCHHHHHHHHHHHHhcCCCEEECCC-Cccc-HHHHHHHHhhCCCCEEecCC---cCCHHHHHHHHHcCCCCEEec
Confidence 2466788887766432 2333322112 2333 34556667667889765211 11110 00111100 01
Q ss_pred ------ChHHHHHHHHHHHHcCCeEEeecCCCchHHHHHHH
Q 019107 295 ------RDEDFVSYIGKWRDAGASLFGGCCRTTPNTIKAIS 329 (346)
Q Consensus 295 ------~~~~~~~~~~~~~~~G~~ivGGCCGt~P~hI~al~ 329 (346)
...+..+.+......|+.++-+|++ ++=-+.+..
T Consensus 280 k~~~~GGit~~~~i~~~A~~~g~~~~~h~~~-s~i~~aa~~ 319 (392)
T 2poz_A 280 DIGTAGGLMETKKICAMAEAYNMRVAPHVCG-SSLIETATL 319 (392)
T ss_dssp CTTTSSCHHHHHHHHHHHHTTTCEECCCCCS-SHHHHHHHH
T ss_pred CccccCCHHHHHHHHHHHHHcCCeEecCCCC-CHHHHHHHH
Confidence 2334555555666789999999998 665554433
No 432
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=31.61 E-value=2e+02 Score=26.67 Aligned_cols=70 Identities=14% Similarity=0.160 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHHHHhC--CCCEEEEccCC----------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc-ccCCC
Q 019107 162 SLETLKEFHRRRVLILANS--GADLIAFETIP----------NKLEAKAYAELLEEEGITIPAWFSFNSKDGIN-VVSGD 228 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~--gvD~i~~ET~~----------~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~-l~~G~ 228 (346)
..+.+.+..++..+...+. |+. |++|+.+ +..+ +.+.+++.+ .|-.+.+.+ |.++ ...|.
T Consensus 153 ~~~~~~e~L~~l~~~a~~~g~gv~-l~lE~~~~~~~~~~~~~t~~~---~~~ll~~v~--~~~~vgl~l-D~gH~~~~g~ 225 (387)
T 1bxb_A 153 VWDWVREALNFMAAYAEDQGYGYR-FALEPKPNEPRGDIYFATVGS---MLAFIHTLD--RPERFGLNP-EFAHETMAGL 225 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHH---HHHHHTTSS--SGGGEEECC-BHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcE-EEEecCCCCCCCCccCCCHHH---HHHHHHHcC--CccceEEEE-ecCcccccCC
Confidence 4566777777777666665 775 5679876 4444 444555544 442133433 3333 35788
Q ss_pred CHHHHHHHhh
Q 019107 229 SILECASIAD 238 (346)
Q Consensus 229 ~~~~av~~~~ 238 (346)
++.+.++.+.
T Consensus 226 d~~~~l~~~~ 235 (387)
T 1bxb_A 226 NFVHAVAQAL 235 (387)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 8888877663
No 433
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=31.59 E-value=52 Score=30.23 Aligned_cols=45 Identities=20% Similarity=0.306 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+++..++++|..+++ | --.+++|++.+++++++.+ +.+.+.+
T Consensus 106 ~H~~~a~~al~aGkhVl~-EKPla~~~~ea~~l~~~a~~~g--~~l~vg~ 152 (393)
T 4fb5_A 106 FHAEMAIAALEAGKHVWC-EKPMAPAYADAERMLATAERSG--KVAALGY 152 (393)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSCSCSSHHHHHHHHHHHHHSS--SCEEECC
T ss_pred HHHHHHHHHHhcCCeEEE-ccCCcccHHHHHHhhhhHHhcC--Ccccccc
Confidence 578888888888987665 8 3458899999999988865 5555554
No 434
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=31.32 E-value=2.7e+02 Score=25.97 Aligned_cols=27 Identities=11% Similarity=0.176 Sum_probs=21.1
Q ss_pred cCCChHHHHHHHHHHHHhhcceeeccc
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITAS 76 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnT 76 (346)
.+++++...+.-+++.++|..=|...|
T Consensus 81 ~l~~~~~~~~~l~~~~~aGv~tiV~~t 107 (364)
T 3k2g_A 81 ALDDLDLAIAEVKQFAAVGGRSIVDPT 107 (364)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccHHHHHHHHHHHHhcCCCeEEEeC
Confidence 467888877888999999998555554
No 435
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=31.00 E-value=95 Score=28.39 Aligned_cols=56 Identities=14% Similarity=0.148 Sum_probs=30.3
Q ss_pred HhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++|+|+|.+-++ ++++++.+++.++ .+.|+.+| .|-++..+...+. .+++.|++-
T Consensus 225 ~~aGaD~I~ld~~-~~e~l~~~v~~~~---~~~~I~AS----------GGIt~~~i~~~a~--~GvD~isvG 280 (296)
T 1qap_A 225 LKAGADIIMLDNF-NTDQMREAVKRVN---GQARLEVS----------GNVTAETLREFAE--TGVDFISVG 280 (296)
T ss_dssp HHTTCSEEEESSC-CHHHHHHHHHTTC---TTCCEEEC----------CCSCHHHHHHHHH--TTCSEEECS
T ss_pred HHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEEE----------CCCCHHHHHHHHH--cCCCEEEEe
Confidence 4467777777774 5566555554322 12333322 3556666655543 366777663
No 436
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=30.78 E-value=2.4e+02 Score=25.94 Aligned_cols=24 Identities=13% Similarity=-0.035 Sum_probs=17.5
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHH
Q 019107 174 VLILANSGADLIAFETIPNKLEAK 197 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~ 197 (346)
++.+.+.|+|.+-++.-.++.+++
T Consensus 258 l~~l~~~g~d~~~~d~~~d~~~~~ 281 (359)
T 2inf_A 258 AGDWHDLPLDVVGLDWRLGIDEAR 281 (359)
T ss_dssp HHHHHTSSCSEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCEEEeCCCCCHHHHH
Confidence 344667899999999666766653
No 437
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=30.57 E-value=3.5e+02 Score=27.52 Aligned_cols=111 Identities=17% Similarity=0.129 Sum_probs=63.8
Q ss_pred CCCHHHH---HHHHHHHHHHHHhCCCCEEEEccC----------C-----------CH-HH---HHHHHHHHHH-hCCCC
Q 019107 160 AVSLETL---KEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEE-EGITI 210 (346)
Q Consensus 160 ~~~~~e~---~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~a~~~-~~~~~ 210 (346)
.++.+|+ .+.|.+.++...++|.|.+=+=-- | ++ .. +..+++++++ .+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 3565554 456777788888899999843210 1 11 12 3445555555 45568
Q ss_pred cEEEEEEEcCCCcccCCCC----HHHHHHHhhcCCCceEEEECCCC---------hh------hHHHHHHHHhhhcCCcE
Q 019107 211 PAWFSFNSKDGINVVSGDS----ILECASIADSCEQVVAVGINCTS---------PR------FIHGLILSVRKVTSKPV 271 (346)
Q Consensus 211 pv~is~~~~~~~~l~~G~~----~~~av~~~~~~~~~~avGvNC~~---------p~------~~~~~l~~l~~~~~~pl 271 (346)
||++-++..+... ..|.+ ..+.+..+++ +++++.+...+ |. .-..+++.+++..+.|+
T Consensus 218 pv~vrls~~~~~~-~~G~~~~~~~~~~~~~l~~--~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pv 294 (729)
T 1o94_A 218 AIATRFGVDTVYG-PGQIEAEVDGQKFVEMADS--LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPV 294 (729)
T ss_dssp EEEEEEEEECSSC-TTSCCTTTHHHHHHHHHGG--GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCE
T ss_pred eEEEEEccccCcC-CCCCCchHHHHHHHHHHHh--hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEE
Confidence 9999998754310 12332 3345555544 36776665431 11 12456777888888997
Q ss_pred EE
Q 019107 272 II 273 (346)
Q Consensus 272 ~v 273 (346)
++
T Consensus 295 i~ 296 (729)
T 1o94_A 295 LG 296 (729)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 438
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=30.52 E-value=3.1e+02 Score=24.95 Aligned_cols=141 Identities=12% Similarity=0.063 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHhCCCCEE-EEccC---CCHHH--------HHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 166 LKEFHRRRVLILANSGADLI-AFETI---PNKLE--------AKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 166 ~~~~~~~~i~~l~~~gvD~i-~~ET~---~~~~E--------~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
+.+...+.++.+.++|+|.+ ++++. -+.++ .+.+++.+++.+.+.|++ .| |..... .
T Consensus 191 l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~i-h~-c~g~~~---------~ 259 (353)
T 1j93_A 191 FATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLI-LY-ASGSGG---------L 259 (353)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEE-EE-CSSCTT---------T
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEE-EE-CCChHH---------H
Confidence 33445555666778999976 45654 23333 233345566542236764 44 433221 2
Q ss_pred HHHhhcCCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHc-C-
Q 019107 234 ASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDA-G- 310 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G- 310 (346)
+..+.+ .+++++++.-. .++ .+-+.+ ..-+.+.-|- |+ .... -++++..+.+++.++. |
T Consensus 260 l~~l~~-~g~d~~~~d~~~d~~---~~~~~~----g~~~~l~Gnl----dp---~~l~---~~~e~i~~~v~~~l~~~~~ 321 (353)
T 1j93_A 260 LERLPL-TGVDVVSLDWTVDMA---DGRRRL----GPNVAIQGNV----DP---GVLF---GSKEFITNRINDTVKKAGK 321 (353)
T ss_dssp GGGGGG-GCCSEEECCTTSCHH---HHHHHT----CSSSEEECCB----CG---GGGG---SCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHh-cCCCEEEeCCCCCHH---HHHHHc----CCCeEEEecC----CH---HHHc---CCHHHHHHHHHHHHHHhCC
Confidence 223333 47889988754 322 222222 2123344332 11 1111 2578888888888764 4
Q ss_pred -CeEEeecCC----CchHHHHHHHHHHcCC
Q 019107 311 -ASLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 311 -~~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
--|++--|| |.|++++++.+.++..
T Consensus 322 ~g~I~~~g~gi~~~~~~enl~a~ve~v~~~ 351 (353)
T 1j93_A 322 GKHILNLGHGIKVGTPEENFAHFFEIAKGL 351 (353)
T ss_dssp SSEEBCBSSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 367777776 5889999999988764
No 439
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=30.46 E-value=76 Score=29.37 Aligned_cols=45 Identities=9% Similarity=0.076 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+++..++++|..++ +| --.+++|++.+++++++.+ +++.+.+
T Consensus 100 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~l~v~~ 146 (361)
T 3u3x_A 100 ERAELAIRAMQHGKDVL-VDKPGMTSFDQLAKLRRVQAETG--RIFSILY 146 (361)
T ss_dssp HHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHTTC--CCEEEEC
T ss_pred HHHHHHHHHHHCCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CEEEEec
Confidence 46666666666676544 36 2236667777777666654 5555554
No 440
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=30.12 E-value=35 Score=30.16 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=26.9
Q ss_pred CHHHHHHHhhcCCCceEEEECCCChhhH------HHHHHHHhhhcCCcEE
Q 019107 229 SILECASIADSCEQVVAVGINCTSPRFI------HGLILSVRKVTSKPVI 272 (346)
Q Consensus 229 ~~~~av~~~~~~~~~~avGvNC~~p~~~------~~~l~~l~~~~~~pl~ 272 (346)
.+.++++.+.. .++++|.++|+....+ ..+.+.+++....|++
T Consensus 54 ~l~~aa~~L~~-ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~ 102 (240)
T 3ixl_A 54 SVVDHARRLQK-QGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT 102 (240)
T ss_dssp GHHHHHHHHHH-TTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE
T ss_pred HHHHHHHHhcc-CCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE
Confidence 34566666655 4899999999653322 2455666555566654
No 441
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=30.05 E-value=3.2e+02 Score=24.97 Aligned_cols=147 Identities=13% Similarity=0.102 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCC--CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhh
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIAD 238 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~--~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~ 238 (346)
++.++-.+ .++.|.+.|+|.|=+- +| +..+...+.++.+... .+-+..+. .... ..+..+++.+.
T Consensus 25 ~~~~~Kl~----ia~~L~~~Gv~~IE~g-~p~~~~~d~e~v~~i~~~~~--~~~i~~l~-r~~~-----~~i~~a~~al~ 91 (325)
T 3eeg_A 25 LNTEEKII----VAKALDELGVDVIEAG-FPVSSPGDFNSVVEITKAVT--RPTICALT-RAKE-----ADINIAGEALR 91 (325)
T ss_dssp CCTTHHHH----HHHHHHHHTCSEEEEE-CTTSCHHHHHHHHHHHHHCC--SSEEEEEC-CSCH-----HHHHHHHHHHT
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEe-CCCCCHhHHHHHHHHHHhCC--CCEEEEee-cCCH-----HHHHHHHHhhc
Confidence 34455444 4556777899977433 44 4666655544444322 23333332 1111 13455555554
Q ss_pred cCCCceEEEE-------------CCCChhh---HHHHHHHHhhhcCCcEEEe-eCCCCccccccccccccCCCChHHHHH
Q 019107 239 SCEQVVAVGI-------------NCTSPRF---IHGLILSVRKVTSKPVIIY-PNSGETYNAELKKWVESTGVRDEDFVS 301 (346)
Q Consensus 239 ~~~~~~avGv-------------NC~~p~~---~~~~l~~l~~~~~~pl~vy-pN~g~~~~~~~~~~~~~~~~~~~~~~~ 301 (346)
. .+++.|.+ ||+..+. +...++..++. ...+.+. |..+ ..+++.+.+
T Consensus 92 ~-ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~-g~~v~f~~~d~~--------------~~~~~~~~~ 155 (325)
T 3eeg_A 92 F-AKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV-VHEVEFFCEDAG--------------RADQAFLAR 155 (325)
T ss_dssp T-CSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT-SSEEEEEEETGG--------------GSCHHHHHH
T ss_pred c-cCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCEEEEEccccc--------------cchHHHHHH
Confidence 3 35565555 4442222 23333333332 2222211 1111 145788889
Q ss_pred HHHHHHHcCCeEEeecC---CCchHHHHHHHHHHcCCC
Q 019107 302 YIGKWRDAGASLFGGCC---RTTPNTIKAISRVLSNKS 336 (346)
Q Consensus 302 ~~~~~~~~G~~ivGGCC---Gt~P~hI~al~~~~~~~~ 336 (346)
.+++..+.|+..|.=|= ..+|..+..+-+.++..-
T Consensus 156 ~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 156 MVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNV 193 (325)
T ss_dssp HHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhC
Confidence 99999999998876432 258999988877776543
No 442
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=29.95 E-value=1.7e+02 Score=26.32 Aligned_cols=28 Identities=11% Similarity=0.107 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEc
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFE 188 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~E 188 (346)
.+.+++.++-.+.++.|.+.|+|+|++=
T Consensus 64 ~s~~~i~~~~~~~~~~L~~~g~d~IVIa 91 (286)
T 2jfq_A 64 RPGEQVKQYTVEIARKLMEFDIKMLVIA 91 (286)
T ss_dssp SCHHHHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4789999999999999999999999874
No 443
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=29.79 E-value=3.6e+02 Score=25.45 Aligned_cols=146 Identities=13% Similarity=0.059 Sum_probs=79.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCCCEEEEccC----------C-----------CH-HH---HHHHHHHHHH-hCCCCcEEEE
Q 019107 162 SLETLKEFHRRRVLILANSGADLIAFETI----------P-----------NK-LE---AKAYAELLEE-EGITIPAWFS 215 (346)
Q Consensus 162 ~~~e~~~~~~~~i~~l~~~gvD~i~~ET~----------~-----------~~-~E---~~a~~~a~~~-~~~~~pv~is 215 (346)
+.+++.+.|.+.++.+.++|.|.|=+--- | ++ .. +..+++++++ .+ ..||.|-
T Consensus 165 eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg-~~~V~vR 243 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIG-ADRVGVR 243 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHC-GGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhC-CCcEEEE
Confidence 45556677888888888899999844321 1 11 23 4445566665 34 2488888
Q ss_pred EEEcCCC-cccCCCCHHHHHHH---hhcCCC------ceEEEECCC-------Ch------h-hHHHHHHHHhhhcCCcE
Q 019107 216 FNSKDGI-NVVSGDSILECASI---ADSCEQ------VVAVGINCT-------SP------R-FIHGLILSVRKVTSKPV 271 (346)
Q Consensus 216 ~~~~~~~-~l~~G~~~~~av~~---~~~~~~------~~avGvNC~-------~p------~-~~~~~l~~l~~~~~~pl 271 (346)
++..+.. -+.+|.++.+++.. +++ .+ ++.|=+-.. .| . .-..+++.+++..+.|+
T Consensus 244 ls~~~~~~g~~~~~~~~~~~~la~~le~-~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPv 322 (402)
T 2hsa_B 244 VSPAIDHLDAMDSNPLSLGLAVVERLNK-IQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTF 322 (402)
T ss_dssp ECSSCCSTTCCCSCHHHHHHHHHHHHHH-HHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCE
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHh-cCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCE
Confidence 7754321 12345566555544 333 35 676665321 12 1 12355677777788897
Q ss_pred EEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcC-CeEEeecCC--CchHHHHHHHH
Q 019107 272 IIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAG-ASLFGGCCR--TTPNTIKAISR 330 (346)
Q Consensus 272 ~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~ivGGCCG--t~P~hI~al~~ 330 (346)
++- .| +++++. .+.++.| +.+|+=+=+ ..|+-.+.+++
T Consensus 323 i~~--G~---------------i~~~~a----~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 323 ICS--GG---------------YTRELG----IEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp EEE--SS---------------CCHHHH----HHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred EEe--CC---------------CCHHHH----HHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 652 22 123322 3355555 666663222 36777766654
No 444
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=29.36 E-value=70 Score=28.64 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|..+ ++| .-.+++|++.+++++++.+ +++++.|
T Consensus 78 ~h~~~~~~al~~gk~v-l~EKP~~~~~~~~~~l~~~a~~~g--~~~~v~~ 124 (308)
T 3uuw_A 78 THYEIIKILLNLGVHV-YVDKPLASTVSQGEELIELSTKKN--LNLMVGF 124 (308)
T ss_dssp GHHHHHHHHHHTTCEE-EECSSSSSSHHHHHHHHHHHHHHT--CCEEECC
T ss_pred hHHHHHHHHHHCCCcE-EEcCCCCCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 4666777778889884 568 4468999999999998876 5565555
No 445
>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} SCOP: c.1.12.7
Probab=29.23 E-value=52 Score=32.89 Aligned_cols=56 Identities=20% Similarity=0.147 Sum_probs=37.7
Q ss_pred hCCCCEEEEccC-CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCC----CcccCCCCHHHHHHHh
Q 019107 179 NSGADLIAFETI-PNKLEAKAYAELLEEEGITIPAWFSFNSKDG----INVVSGDSILECASIA 237 (346)
Q Consensus 179 ~~gvD~i~~ET~-~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~----~~l~~G~~~~~av~~~ 237 (346)
.+.+|+||+||= |++.+++...+.+++.-+++. +.+.|.+. .+ .+.+.+......+
T Consensus 386 ap~aDliW~Et~~P~~~~a~~fa~~i~~~~P~~~--LaYN~SPSFnW~~~-~~d~~~~~f~~~l 446 (538)
T 1dqu_A 386 APFADLIWMESKLPDYKQAKEFADGVHAVWPEQK--LAYNLSPSFNWKKA-MPRDEQETYIKRL 446 (538)
T ss_dssp TTSCSEEECCCSSCCHHHHHHHHHHHHHHCTTCE--EEEECCSSSCGGGT-SCHHHHHSHHHHH
T ss_pred CcccceEEeccCCCCHHHHHHHHHHHHHhCCCce--EEecCCcchhhhhh-CCHHHHHHHHHHH
Confidence 478999999997 999999999999998653443 34443332 22 3444455554444
No 446
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=29.09 E-value=3e+02 Score=24.21 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=35.2
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEE
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAW 213 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~ 213 (346)
-+.+++.++-.+.++.|.+.|+|+|++=.... -..+++.+++.- +.||+
T Consensus 45 ~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTa---s~~~l~~lr~~~-~iPvi 93 (267)
T 2gzm_A 45 RSREEVRQFTWEMTEHLLDLNIKMLVIACNTA---TAVVLEEMQKQL-PIPVV 93 (267)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTCSEEEECCHHH---HHHHHHHHHHHC-SSCEE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeCchh---hHHHHHHHHHhC-CCCEE
Confidence 47889999999999999999999998643211 112466666653 58987
No 447
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=28.90 E-value=1.3e+02 Score=27.67 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=55.0
Q ss_pred HHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC---c---ccCCCCHHHHHHHh-h--cCCCce
Q 019107 174 VLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI---N---VVSGDSILECASIA-D--SCEQVV 244 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~---~---l~~G~~~~~av~~~-~--~~~~~~ 244 (346)
++.+.+.|+|++-+=...-..-++++++++++.+ ..|-++.+++-... . +.+ .++.+.+..+ . ...+++
T Consensus 96 v~~~a~lGaD~vTVHa~~G~~~m~aa~e~a~~~~-~~~~llaVtvLTS~s~~~l~~l~~-~~~~e~V~~lA~~a~~~G~d 173 (303)
T 3ru6_A 96 CEEVSKLGVDMINIHASAGKIAIQEVMTRLSKFS-KRPLVLAVSALTSFDEENFFSIYR-QKIEEAVINFSKISYENGLD 173 (303)
T ss_dssp HHHHHTTTCSEEEEEGGGCHHHHHHHHHHHTTSS-SCCEEEEECSCTTCCHHHHHHHHS-SCHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhcCCCEEEEeccCCHHHHHHHHHHHHhcC-CCceEEEEEEecCCCHHHHHHHHc-CCHHHHHHHHHHHHHHcCCC
Confidence 4457778999999887777777888888887655 35666666543221 1 222 3455544432 1 123444
Q ss_pred EEEECCCChhhHHHHHHHHhhhc-CCcEEEeeCCC
Q 019107 245 AVGINCTSPRFIHGLILSVRKVT-SKPVIIYPNSG 278 (346)
Q Consensus 245 avGvNC~~p~~~~~~l~~l~~~~-~~pl~vypN~g 278 (346)
||=|+.-+ + ..+++.. ..++.+-|--+
T Consensus 174 --GvV~s~~E-~----~~IR~~~~~~fl~VTPGIr 201 (303)
T 3ru6_A 174 --GMVCSVFE-S----KKIKEHTSSNFLTLTPGIR 201 (303)
T ss_dssp --EEECCTTT-H----HHHHHHSCTTSEEEECCCC
T ss_pred --EEEECHHH-H----HHHHHhCCCccEEECCCcC
Confidence 67786433 2 3334433 34677777543
No 448
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=28.85 E-value=73 Score=29.00 Aligned_cols=45 Identities=18% Similarity=0.188 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+++..++++|.+++ +| --.+++|++.+++++++.+ +++++.+
T Consensus 85 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~v~~ 131 (318)
T 3oa2_A 85 LHYPHIAAGLRLGCDVI-CEKPLVPTPEMLDQLAVIERETD--KRLYNIL 131 (318)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSSCCSCHHHHHHHHHHHHHHT--CCEEECC
T ss_pred HHHHHHHHHHHCCCeEE-EECCCcCCHHHHHHHHHHHHHhC--CEEEEEE
Confidence 36666666777776644 46 2357777777777777765 6665554
No 449
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=28.84 E-value=15 Score=20.67 Aligned_cols=8 Identities=63% Similarity=1.647 Sum_probs=6.3
Q ss_pred ecCCCchH
Q 019107 316 GCCRTTPN 323 (346)
Q Consensus 316 GCCGt~P~ 323 (346)
||||.-|.
T Consensus 1 gccg~ypn 8 (26)
T 1p1p_A 1 GCCGSYPN 8 (26)
T ss_dssp CCSTTSCC
T ss_pred CccccCCC
Confidence 79998774
No 450
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=28.81 E-value=2e+02 Score=22.13 Aligned_cols=7 Identities=14% Similarity=0.615 Sum_probs=3.8
Q ss_pred CCEEEEc
Q 019107 182 ADLIAFE 188 (346)
Q Consensus 182 vD~i~~E 188 (346)
+|+++++
T Consensus 84 ~dliilD 90 (157)
T 3hzh_A 84 IDIVTLX 90 (157)
T ss_dssp CCEEEEC
T ss_pred CCEEEEe
Confidence 4555555
No 451
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=28.76 E-value=1.2e+02 Score=28.17 Aligned_cols=50 Identities=16% Similarity=0.034 Sum_probs=34.3
Q ss_pred HHHHHHHhCCCCEEEEccCCC---HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc
Q 019107 172 RRVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSFNSKDGIN 223 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~---~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~ 223 (346)
+.++.+.+.|++.|++|++.. ..++..+++.+.+.+ +||+++-.|.....
T Consensus 226 ~~l~~~~~~g~~GiVl~~~G~Gn~p~~~~~~l~~a~~~g--i~VV~~Sr~~~G~v 278 (326)
T 1nns_A 226 LPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTG--TAVVRSSRVPTGAT 278 (326)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTT--CEEEEEESSSSSCB
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCC--CEEEEECCCCCCCc
Confidence 356677788999999998864 245555555455544 99998887765443
No 452
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=28.58 E-value=2.1e+02 Score=26.92 Aligned_cols=111 Identities=7% Similarity=0.018 Sum_probs=63.2
Q ss_pred CCCHHHHH----HHHHHHHHHHH-hCCCCEEEEcc----------------C-C------CHH-H---HHHHHHHHHH-h
Q 019107 160 AVSLETLK----EFHRRRVLILA-NSGADLIAFET----------------I-P------NKL-E---AKAYAELLEE-E 206 (346)
Q Consensus 160 ~~~~~e~~----~~~~~~i~~l~-~~gvD~i~~ET----------------~-~------~~~-E---~~a~~~a~~~-~ 206 (346)
.++.+|+. +.|.+.++.+. ++|.|.|=+-- - . +++ . +..+++++++ .
T Consensus 162 ~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av 241 (379)
T 3aty_A 162 ELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV 241 (379)
T ss_dssp ECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc
Confidence 46777666 45777777788 89999984421 0 0 222 2 3444555655 3
Q ss_pred CCCCcEEEEEEEcCCC-cccCCCCHHHHHHHh---hcCCCceEEEECCCC---hhhHHHHHHHHhhhcCCcEEE
Q 019107 207 GITIPAWFSFNSKDGI-NVVSGDSILECASIA---DSCEQVVAVGINCTS---PRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 207 ~~~~pv~is~~~~~~~-~l~~G~~~~~av~~~---~~~~~~~avGvNC~~---p~~~~~~l~~l~~~~~~pl~v 273 (346)
+ ..||.+-++..+.. ...+|.++.+++..+ .+ .+++.|-+-+.. +..-.. ++.+++..+.|+++
T Consensus 242 g-~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~-~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~ 312 (379)
T 3aty_A 242 G-SDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEP-LSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKIS 312 (379)
T ss_dssp C-GGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGG-GCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEE
T ss_pred C-CCeEEEEECcccccccCCCCCCHHHHHHHHHHHHH-hCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEE
Confidence 4 23777666553321 123566666655544 33 478887776632 111114 67777777888765
No 453
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=28.52 E-value=39 Score=29.10 Aligned_cols=45 Identities=13% Similarity=0.191 Sum_probs=26.1
Q ss_pred cCCCCHHHHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEE
Q 019107 225 VSGDSILECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVII 273 (346)
Q Consensus 225 ~~G~~~~~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~v 273 (346)
.|..++...++.+.. ..|+++=+- |..+...++++++..+.|+++
T Consensus 111 iDS~al~~~~~~i~~-~~PD~iEiL---PGi~p~iI~~i~~~~~~PiIa 155 (192)
T 3kts_A 111 IDSSAYNKGVALIQK-VQPDCIELL---PGIIPEQVQKMTQKLHIPVIA 155 (192)
T ss_dssp CSHHHHHHHHHHHHH-HCCSEEEEE---CTTCHHHHHHHHHHHCCCEEE
T ss_pred EEcchHHHHHHHHhh-cCCCEEEEC---CchhHHHHHHHHHhcCCCEEE
Confidence 355555566665544 356655333 444556666666667777766
No 454
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=28.42 E-value=77 Score=29.76 Aligned_cols=45 Identities=18% Similarity=0.298 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+++...+++|..++ +| --.+++|++.+++++++.+ +.+.+.+
T Consensus 108 ~H~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 154 (412)
T 4gqa_A 108 LHYTMAMAAIAAGKHVY-CEKPLAVNEQQAQEMAQAARRAG--VKTMVAF 154 (412)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCCeE-eecCCcCCHHHHHHHHHHHHHhC--Ceeeecc
Confidence 57788888888898765 47 3358899999999888865 4444443
No 455
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=28.20 E-value=72 Score=29.54 Aligned_cols=45 Identities=18% Similarity=0.151 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|..++ +|- -.+++|++.+++++++.+ +.+++.+
T Consensus 79 ~H~~~~~~al~aGk~Vl-~EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 125 (364)
T 3e82_A 79 THAPLARLALNAGKHVV-VDKPFTLDMQEARELIALAEEKQ--RLLSVFH 125 (364)
T ss_dssp GHHHHHHHHHHTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHHCCCcEE-EeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 46677777888898755 486 569999999999998865 6666544
No 456
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=28.19 E-value=3.5e+02 Score=24.74 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=59.3
Q ss_pred CCHHHHHHHHHHHHHHHHh-------CCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILAN-------SGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~-------~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+|+...... +..|.+ .+.=..+|| =||...=...--++++.| ..++ .|. ..+..+.-|+++.|.
T Consensus 11 ls~~ei~~ll~~-A~~lk~~~~~~L~gk~la~lF~-e~STRTR~SFe~A~~~LG-g~~i--~l~-~~~ss~~kgEsl~DT 84 (307)
T 3tpf_A 11 FSKEEILSLVNH-ASELKKEPKKLLQDKTLAMIFE-KNSTRTRMAFELAITELG-GKAL--FLS-SNDLQLSRGEPVKDT 84 (307)
T ss_dssp SCHHHHHHHHHH-HHHHHHSCCCTTTTCEEEEEES-SCCHHHHHHHHHHHHHTT-CEEE--EEC-TTTCCTTTSSCHHHH
T ss_pred CCHHHHHHHHHH-HHHHHhcchhhcCCCEEEEEec-CCCcchHHhHHHHHHHcC-CeEE--EcC-cccccCCCCCCHHHH
Confidence 577888765543 333332 222122333 367765344444567776 2333 333 334556789999999
Q ss_pred HHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEE
Q 019107 234 ASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVI 272 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~ 272 (346)
++.+.. . +++|.+=.... ..+..+.++.+.|++
T Consensus 85 arvls~-~-~D~iviR~~~~----~~~~~lA~~~~vPVI 117 (307)
T 3tpf_A 85 ARVIGA-M-VDFVMMRVNKH----ETLLEFARYSKAPVI 117 (307)
T ss_dssp HHHHHH-H-SSEEEEECSCH----HHHHHHHHHCSSCEE
T ss_pred HHHHHH-h-CCEEEEecCCh----HHHHHHHHhCCCCEE
Confidence 999865 3 78888887653 344555666788864
No 457
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=28.05 E-value=3.3e+02 Score=24.43 Aligned_cols=78 Identities=9% Similarity=0.059 Sum_probs=46.8
Q ss_pred HHHHHHhCCCCEEEEc--cCC-CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 173 RVLILANSGADLIAFE--TIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E--T~~-~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++.+...|+|++++. .-| +.+.+...+++++.. +.|+||-+. +.+..++...++ .++++|.+-
T Consensus 52 ~~e~a~~~GaD~v~lDlEh~~~~~~~~~~~l~a~~~~--~~~~~VRv~---------~~d~~di~~~ld--~ga~~ImlP 118 (287)
T 2v5j_A 52 SAELLAGAGFDWLLIDGEHAPNNVQTVLTQLQAIAPY--PSQPVVRPS---------WNDPVQIKQLLD--VGTQTLLVP 118 (287)
T ss_dssp HHHHHHTSCCSEEEEESSSSSCCHHHHHHHHHHHTTS--SSEEEEECS---------SSCHHHHHHHHH--TTCCEEEES
T ss_pred HHHHHHhCCCCEEEEeCCCccchHHHHHHHHHHHHhc--CCCEEEEEC---------CCCHHHHHHHHh--CCCCEEEeC
Confidence 3455777999999975 333 344444445544433 477776652 112234444444 367888887
Q ss_pred CC-ChhhHHHHHHHH
Q 019107 250 CT-SPRFIHGLILSV 263 (346)
Q Consensus 250 C~-~p~~~~~~l~~l 263 (346)
-+ +++.+..+++.+
T Consensus 119 ~V~saeea~~~~~~~ 133 (287)
T 2v5j_A 119 MVQNADEAREAVRAT 133 (287)
T ss_dssp CCCSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHh
Confidence 76 678777777654
No 458
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=27.91 E-value=3.2e+02 Score=26.00 Aligned_cols=70 Identities=16% Similarity=0.205 Sum_probs=41.5
Q ss_pred HhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC-----------cccCCCCHHHH---HHHhhcCCCc
Q 019107 178 ANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI-----------NVVSGDSILEC---ASIADSCEQV 243 (346)
Q Consensus 178 ~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~-----------~l~~G~~~~~a---v~~~~~~~~~ 243 (346)
.+.|+..+ ++-+..|++.+.+++++.+...+|++-+....+. .-+-|-++.++ ++.+....++
T Consensus 140 ~~~gv~~~---~vds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG~~~sKfG~~~~~~~~~~~~~~~~~~l 216 (441)
T 3n2b_A 140 LQLKIKCF---NVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNL 216 (441)
T ss_dssp HHTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHCTTE
T ss_pred HHCCCCEE---EEcCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccCCCCCcccCCHHHHHHHHHHHhcCCCe
Confidence 34677655 4567888888888888776455666665432110 12356555444 4444444566
Q ss_pred eEEEECC
Q 019107 244 VAVGINC 250 (346)
Q Consensus 244 ~avGvNC 250 (346)
...|+-|
T Consensus 217 ~l~Glh~ 223 (441)
T 3n2b_A 217 DVHGIDC 223 (441)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 7778877
No 459
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=27.91 E-value=3.1e+02 Score=24.06 Aligned_cols=19 Identities=11% Similarity=0.230 Sum_probs=14.1
Q ss_pred HHHHHHHHhCCCCEEEEcc
Q 019107 171 RRRVLILANSGADLIAFET 189 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET 189 (346)
.+.++.|.++|||+|-+-+
T Consensus 34 ~~~~~~l~~~G~D~IElG~ 52 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 3457778889999987743
No 460
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=27.69 E-value=85 Score=28.58 Aligned_cols=45 Identities=7% Similarity=-0.026 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCc--EEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIP--AWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~p--v~is~ 216 (346)
.|.+++..++++|.+++ +| --.+++|++.+++++++.+ ++ +.+.+
T Consensus 79 ~H~~~~~~al~aGkhVl-~EKPla~~~~ea~~l~~~a~~~g--~~~~~~v~~ 127 (337)
T 3ip3_A 79 LNGKILLEALERKIHAF-VEKPIATTFEDLEKIRSVYQKVR--NEVFFTAMF 127 (337)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSSSCSSHHHHHHHHHHHHHHT--TTCCEEECC
T ss_pred hHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--CceEEEecc
Confidence 57788888888888855 57 2357889999999888876 66 44444
No 461
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=27.68 E-value=3e+02 Score=23.85 Aligned_cols=150 Identities=13% Similarity=0.011 Sum_probs=78.6
Q ss_pred CCHHHHHHH---HHHHHHHHHhCCCCEEEEc-cCCCH----HHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHH
Q 019107 161 VSLETLKEF---HRRRVLILANSGADLIAFE-TIPNK----LEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 161 ~~~~e~~~~---~~~~i~~l~~~gvD~i~~E-T~~~~----~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
.+.+++.++ ..+.++.|.++|+|+|++= |-.+. .-.+.+.+.+++.. ++|++-+ ...
T Consensus 43 ~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~-~iPv~~~--------------~~A 107 (240)
T 3ixl_A 43 VTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREAT-GLPCTTM--------------STA 107 (240)
T ss_dssp SSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHH-SSCEEEH--------------HHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhcc-CCCEECH--------------HHH
Confidence 577777776 3555677888999999975 22122 11233444555432 5898721 133
Q ss_pred HHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHH-H-HHcC
Q 019107 233 CASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGK-W-RDAG 310 (346)
Q Consensus 233 av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~G 310 (346)
++..+.. .+..-|||=.+-...+...++..-+.....+ +.|.+-..++.. ..+ ..+++.+.+.+++ . ...|
T Consensus 108 ~~~al~~-~g~~rvglltpy~~~~~~~~~~~l~~~Giev-~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~l~~~~~ 180 (240)
T 3ixl_A 108 VLNGLRA-LGVRRVALATAYIDDVNERLAAFLAEESLVP-TGCRSLGITGVE-AMA----RVDTATLVDLCVRAFEAAPD 180 (240)
T ss_dssp HHHHHHH-TTCSEEEEEESSCHHHHHHHHHHHHHTTCEE-EEEEECCCCCHH-HHH----TCCHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHH-hCCCEEEEEeCChHHHHHHHHHHHHHCCCEE-eccccCCCCCcc-hhh----cCCHHHHHHHHHHHhhcCCC
Confidence 4444443 3555666665533333344433222224443 334332222211 011 1457889998888 5 3444
Q ss_pred --CeEEeecCCCchH-HHHHHHHHHc
Q 019107 311 --ASLFGGCCRTTPN-TIKAISRVLS 333 (346)
Q Consensus 311 --~~ivGGCCGt~P~-hI~al~~~~~ 333 (346)
+-++| |-.-..- .|..+.+.+.
T Consensus 181 adaivL~-CT~l~~l~~i~~le~~lg 205 (240)
T 3ixl_A 181 SDGILLS-SGGLLTLDAIPEVERRLG 205 (240)
T ss_dssp CSEEEEE-CTTSCCTTHHHHHHHHHS
T ss_pred CCEEEEe-CCCCchhhhHHHHHHHhC
Confidence 55566 7775443 4566666553
No 462
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=27.62 E-value=1.3e+02 Score=31.62 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=60.1
Q ss_pred CCHHHHHHHHHHHHHHHHh------CCCCEEEEccCC-----CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCC
Q 019107 161 VSLETLKEFHRRRVLILAN------SGADLIAFETIP-----NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDS 229 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~------~gvD~i~~ET~~-----~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~ 229 (346)
++.+++.+.|++.++.+.+ .+.|++++|... ...+ ....++++..+ .||++-.... .| .
T Consensus 175 ~~~~~i~~~~~~~l~~~a~~~~~~~~~~D~vvVEGaGGl~~p~~~~-~~~adla~~l~--~PVILV~d~~------lG-~ 244 (831)
T 4a0g_A 175 VEDSVVLQMIEKCLKEEMECGVKSEKSDLLCLVETAGGVASPGPSG-TLQCDLYRPFR--LPGILVGDGR------LG-G 244 (831)
T ss_dssp CCHHHHHHHHHHHHHHHC---------CEEEEEECCSSTTCBCTTS-CBHHHHTGGGC--CCEEEECCCS------TT-H
T ss_pred CCHHHHHHHHHHHHHhhhhccccccccCCEEEEECCCCccCCCCCC-ccHHHHHHHcC--CCEEEEECCC------Cc-H
Confidence 5778888888765554432 168999999844 2122 23356667765 9998766432 22 2
Q ss_pred HHHHHHH---hhc-CCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEee
Q 019107 230 ILECASI---ADS-CEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 230 ~~~av~~---~~~-~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+..++.. +.. ...+.+|-+|-..++....+.+.+.+ ..|+.+.|
T Consensus 245 i~~~~lt~~~l~~~g~~v~GvI~N~~~~~~~~~l~~~l~~--~~~v~vLg 292 (831)
T 4a0g_A 245 ISGTIAAYESLKLRGYDIAAVVFEDHGLVNEVPLTSYLRN--KVPVLVLP 292 (831)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEEECCSSCTHHHHHHHTTT--SSCEEEEC
T ss_pred HHHHHHHHHHHHHCCCcEEEEEEeCCchhHHHHHHHHHHh--CCCceeeC
Confidence 3333322 222 23577888997777777777777654 34544444
No 463
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=27.39 E-value=3.6e+02 Score=24.71 Aligned_cols=126 Identities=9% Similarity=0.061 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHHHhhcceeeccccccCHHhHHh----CCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019107 53 SPHLVRKVHLDYLDAGANIIITASYQATIQGFEA----KGFSTEEAEALLRRSVEIACEAREIYYDRCMKDSWDFTGSGR 128 (346)
Q Consensus 53 ~Pe~V~~iH~~yl~AGA~iI~TnTy~as~~~l~~----~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~~~~~~ 128 (346)
.|+..+++..-.-+.|.+.|+..-- -.++.. ..+. +..-+.+++.|+.|++.
T Consensus 41 ~~~~t~~m~~~i~~~G~N~vRipi~---w~~~~~~~~~g~~~-~~~l~~ld~vV~~a~~~-------------------- 96 (340)
T 3qr3_A 41 YPDGIGQMQHFVNEDGMTIFRLPVG---WQYLVNNNLGGNLD-STSISKYDQLVQGCLSL-------------------- 96 (340)
T ss_dssp SCCHHHHHHHHHHHHCCCEEEEEEC---HHHHTTTCTTCCCC-HHHHHHHHHHHHHHHHT--------------------
T ss_pred CCccHHHHHHHHHHCCCCEEEEEee---HHHhCCCCCCCccC-HHHHHHHHHHHHHHHHC--------------------
Confidence 7888999988888999999886542 233322 1233 23344555555554421
Q ss_pred CCCCCcEEEEecCCccCCcCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHH-----H----HH
Q 019107 129 ISSRPVLVAASVGSYGAYLADGSEYSGDY--GDAVSLETLKEFHRRRVLILANSGADLIAFETIPNKL-----E----AK 197 (346)
Q Consensus 129 ~~~~~~~VaGsiGP~g~~l~~g~eY~g~~--~~~~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~-----E----~~ 197 (346)
.++|--.+=-+.. |.+.. ....+.+...++.++.++.+.+. +-+++|++..+. + .+
T Consensus 97 ----Gi~vIlDlH~~~~-------~~g~~~~~~~~~~~~~~~~w~~iA~ryk~~--~~Vi~el~NEP~~~~~~~w~~~~~ 163 (340)
T 3qr3_A 97 ----GAYCIVDIHNYAR-------WNGGIIGQGGPTNAQFTSLWSQLASKYASQ--SRVWFGIMNEPHDVNINTWAATVQ 163 (340)
T ss_dssp ----TCEEEEEECSTTE-------ETTEETTTTSSCHHHHHHHHHHHHHHHTTC--TTEEEECCSCCCSSCHHHHHHHHH
T ss_pred ----CCEEEEEecCCcc-------cCCcccCCCHHHHHHHHHHHHHHHHHhCCC--CcEEEEecCCCCCCCHHHHHHHHH
Confidence 2344444332221 11110 01136788888888888888763 444689887543 1 23
Q ss_pred HHHHHHHHhCCC-CcEEEE
Q 019107 198 AYAELLEEEGIT-IPAWFS 215 (346)
Q Consensus 198 a~~~a~~~~~~~-~pv~is 215 (346)
.++.++|+.+.+ .+++|.
T Consensus 164 ~~i~aIR~~~~~~~~Iiv~ 182 (340)
T 3qr3_A 164 EVVTAIRNAGATSQFISLP 182 (340)
T ss_dssp HHHHHHHHTTCCSSCEEEE
T ss_pred HHHHHHHhhCCCccEEEEe
Confidence 445556666544 355543
No 464
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=27.12 E-value=2.7e+02 Score=26.81 Aligned_cols=84 Identities=17% Similarity=0.255 Sum_probs=54.8
Q ss_pred HHHHHhhcCCCceEEEECCCChhhHHHHHHHHhhhcCCcEEEeeCCCCcc-ccccccccccCCCChHHHHHHHHHHHH-c
Q 019107 232 ECASIADSCEQVVAVGINCTSPRFIHGLILSVRKVTSKPVIIYPNSGETY-NAELKKWVESTGVRDEDFVSYIGKWRD-A 309 (346)
Q Consensus 232 ~av~~~~~~~~~~avGvNC~~p~~~~~~l~~l~~~~~~pl~vypN~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 309 (346)
+.+...+.........|||.+++.+..+++...+ .+.|+++....+.+- . ..+. +.+++.|..+++...+ .
T Consensus 3 ~ll~~~~~~~a~av~afn~~n~e~i~Ail~aAee-~~sPVIi~~s~~~v~~~---gGY~---g~~~~~~~~~v~~~A~~~ 75 (420)
T 2fiq_A 3 TLIARHKAGEHIGICSVCSAHPLVIEAALAFDRN-STRKVLIEATSNQVNQF---GGYT---GMTPADFREFVFAIADKV 75 (420)
T ss_dssp HHHHHHHTTCCBCEEEECCCCHHHHHHHHHHTTT-SCCCEEEEEETTTBSTT---CTTT---TBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCceEEEEeccCCHHHHHHHHHHHHH-cCCCEEEEcChhhhhhc---cCCC---CCCHHHHHHHHHHHHHHc
Confidence 4455444432256677888999999999888765 478988776555420 0 0121 1347889888887764 5
Q ss_pred CCe----EEeecCCCch
Q 019107 310 GAS----LFGGCCRTTP 322 (346)
Q Consensus 310 G~~----ivGGCCGt~P 322 (346)
++. ++++-=|.+-
T Consensus 76 ~vP~~~VaLHlDHg~~~ 92 (420)
T 2fiq_A 76 GFARERIILGGDHLGPN 92 (420)
T ss_dssp TCCGGGEEEEEEEESSG
T ss_pred CcCcceEEEECCCCCCc
Confidence 766 7888777665
No 465
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=27.07 E-value=3.4e+02 Score=25.27 Aligned_cols=20 Identities=25% Similarity=0.262 Sum_probs=15.5
Q ss_pred HHHHHHhCCCCEEEEccCCC
Q 019107 173 RVLILANSGADLIAFETIPN 192 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~ 192 (346)
.+..|.+.+||.|.+|+-.+
T Consensus 251 i~~~l~~~~~D~i~lE~~~~ 270 (357)
T 3rpd_A 251 VFPKLQKSNIDIISLECHNS 270 (357)
T ss_dssp THHHHHHSSCCEEEECCTTC
T ss_pred HHHHHHhCCCCEEEEEecCC
Confidence 45566778999999997554
No 466
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=27.04 E-value=3.1e+02 Score=23.72 Aligned_cols=93 Identities=12% Similarity=0.128 Sum_probs=55.3
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcC-CC-cccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKD-GI-NVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~-~~-~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
.+++++..++|+..|-.. ++++++ .+++.- ++|++ ...-++ .+ ...-+.++.++-+.++ .+++.|-+
T Consensus 39 ~~~A~a~~~~Ga~~i~~~---~~~~i~----~ir~~v-~~Pvi-g~~k~d~~~~~~~I~~~~~~i~~~~~--~Gad~V~l 107 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIE---GIDNLR----MTRSLV-SVPII-GIIKRDLDESPVRITPFLDDVDALAQ--AGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHTTCSEEEEE---SHHHHH----HHHTTC-CSCEE-EECBCCCSSCCCCBSCSHHHHHHHHH--HTCSEEEE
T ss_pred HHHHHHHHHCCCeEEEEC---CHHHHH----HHHHhc-CCCEE-EEEeecCCCcceEeCccHHHHHHHHH--cCCCEEEE
Confidence 346777888999988764 444433 344432 59984 332221 11 1112235566555443 37889888
Q ss_pred CCC---ChhhHHHHHHHHhhhcCCcEEEee
Q 019107 249 NCT---SPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 249 NC~---~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+++ .|+.+..+++.+++. ..++++-.
T Consensus 108 ~~~~~~~p~~l~~~i~~~~~~-g~~v~~~v 136 (232)
T 3igs_A 108 DGTARQRPVAVEALLARIHHH-HLLTMADC 136 (232)
T ss_dssp ECCSSCCSSCHHHHHHHHHHT-TCEEEEEC
T ss_pred CccccCCHHHHHHHHHHHHHC-CCEEEEeC
Confidence 887 377888888887654 55555543
No 467
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=27.02 E-value=2.7e+02 Score=26.11 Aligned_cols=41 Identities=17% Similarity=0.088 Sum_probs=28.4
Q ss_pred HHHHHhhcCCCceEEEECCC--ChhhHHHHHHHHhhhc-CCcEEE
Q 019107 232 ECASIADSCEQVVAVGINCT--SPRFIHGLILSVRKVT-SKPVII 273 (346)
Q Consensus 232 ~av~~~~~~~~~~avGvNC~--~p~~~~~~l~~l~~~~-~~pl~v 273 (346)
+.+..+.. .++++|-+||+ .|+.....++.+++.. +.|+++
T Consensus 156 ~~a~~~~~-~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv 199 (404)
T 1eep_A 156 ERVEELVK-AHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIA 199 (404)
T ss_dssp HHHHHHHH-TTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHH-CCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEE
Confidence 33444433 47889999886 3667777888888776 678776
No 468
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=26.96 E-value=3.7e+02 Score=24.67 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=74.7
Q ss_pred HHHHHHHHHhCCCCEEE-EccCC---CHH--------HHHHHHHHHH-Hh---CC-CCcEEEEEEEcCCCcccCCCCHHH
Q 019107 170 HRRRVLILANSGADLIA-FETIP---NKL--------EAKAYAELLE-EE---GI-TIPAWFSFNSKDGINVVSGDSILE 232 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~-~ET~~---~~~--------E~~a~~~a~~-~~---~~-~~pv~is~~~~~~~~l~~G~~~~~ 232 (346)
..+.++.+.++|+|.|. +++.. +.+ -.+.+++.++ +. |. +.|++. |.|.. . .
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~-~~~G~-~---------~ 267 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMII-FAKDG-H---------F 267 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEE-EETTC-G---------G
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEE-EcCCc-H---------H
Confidence 34445556679999884 55422 332 2334456666 54 11 267654 44421 1 2
Q ss_pred HHHHhhcCCCceEEEECCC-ChhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHc-C
Q 019107 233 CASIADSCEQVVAVGINCT-SPRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDA-G 310 (346)
Q Consensus 233 av~~~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 310 (346)
.+..+.. .+++++++--. .+. .+-+.+. ++ +.++-|- |+ ..+. -++++..+.+++.++. |
T Consensus 268 ~l~~l~~-~g~d~i~~d~~~dl~---~a~~~~g---~~-~~l~Gnl----dp---~~L~---gt~e~i~~~v~~~l~~~g 329 (367)
T 1r3s_A 268 ALEELAQ-AGYEVVGLDWTVAPK---KARECVG---KT-VTLQGNL----DP---CALY---ASEEEIGQLVKQMLDDFG 329 (367)
T ss_dssp GHHHHTT-SSCSEEECCTTSCHH---HHHHHHC---SS-SEEEEEE----CG---GGGG---SCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHh-cCCCEEEeCCCCCHH---HHHHHcC---CC-eEEEeCC----Ch---HHhc---CCHHHHHHHHHHHHHHhC
Confidence 3344544 47888887542 332 2222221 11 2333332 11 1111 2578888888888764 4
Q ss_pred --CeEEeecCC----CchHHHHHHHHHHcCC
Q 019107 311 --ASLFGGCCR----TTPNTIKAISRVLSNK 335 (346)
Q Consensus 311 --~~ivGGCCG----t~P~hI~al~~~~~~~ 335 (346)
--|++--|| |.|++++++.+.++..
T Consensus 330 ~~g~I~~~ghgi~~~~p~env~a~v~~v~~~ 360 (367)
T 1r3s_A 330 PHRYIANLGHGLYPDMDPEHVGAFVDAVHKH 360 (367)
T ss_dssp SSSEEEEESSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCeeecCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 678887777 5679999999887653
No 469
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=26.95 E-value=2.5e+02 Score=25.52 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=54.7
Q ss_pred HHHHHhCCCCEEEEccC--CCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 174 VLILANSGADLIAFETI--PNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 174 i~~l~~~gvD~i~~ET~--~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
++.+.+- ||++-+-.+ .+.. .++.+.+++ +||.++- +.-.+-+.+..+++++........+.+-|+
T Consensus 104 v~~l~~~-vd~lqIgA~~~~n~~----LLr~va~~g--kPVilK~-----G~~~t~~ei~~ave~i~~~Gn~~i~L~erg 171 (285)
T 3sz8_A 104 AAPVAEI-ADVLQVPAFLARQTD----LVVAIAKAG--KPVNVKK-----PQFMSPTQLKHVVSKCGEVGNDRVMLCERG 171 (285)
T ss_dssp HHHHHTT-CSEEEECGGGTTCHH----HHHHHHHTS--SCEEEEC-----CTTSCGGGTHHHHHHHHHTTCCCEEEEECC
T ss_pred HHHHHHh-CCEEEECccccCCHH----HHHHHHccC--CcEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 4445555 999987653 3443 444455554 9999764 211122345678888765434567788886
Q ss_pred C---hhh---HHHHHHHHhhhc-CCcEEEeeC
Q 019107 252 S---PRF---IHGLILSVRKVT-SKPVIIYPN 276 (346)
Q Consensus 252 ~---p~~---~~~~l~~l~~~~-~~pl~vypN 276 (346)
. +.. =...+..+++.+ ..|+++.|.
T Consensus 172 ~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~s 203 (285)
T 3sz8_A 172 SSFGYDNLVVDMLGFRQMAETTGGCPVIFDVT 203 (285)
T ss_dssp EECSSSCEECCTTHHHHHHHHTTSCCEEEETT
T ss_pred CCCCCCcCccCHHHHHHHHHhCCCCCEEEeCC
Confidence 3 222 145566677766 589988765
No 470
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=26.92 E-value=62 Score=30.04 Aligned_cols=44 Identities=18% Similarity=0.103 Sum_probs=31.6
Q ss_pred HHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 170 HRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 170 ~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
|.+++..++++|..++ +|- -.+++|++.+++++++.+ +++++.+
T Consensus 96 h~~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~~~--~~~~v~~ 141 (383)
T 3oqb_A 96 RPGLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANSKG--VKHGTVQ 141 (383)
T ss_dssp SHHHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHHTT--CCEEECC
T ss_pred HHHHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 5667777888888866 684 468889999988888865 4444433
No 471
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=26.76 E-value=3.4e+02 Score=24.08 Aligned_cols=123 Identities=11% Similarity=0.156 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC-ChhhHHHHHHHHhhh-cCCcEE
Q 019107 195 EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-SPRFIHGLILSVRKV-TSKPVI 272 (346)
Q Consensus 195 E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~-~p~~~~~~l~~l~~~-~~~pl~ 272 (346)
+-..+++.+++.+ .+++.=+-+.|-+ .+...+++.+.. .+++.+-|+|. +++.+.++++.+.+. .+.|.+
T Consensus 66 ~G~~~v~~Lk~~g--~~VflDlK~~DIp-----nTv~~a~~~~~~-~gaD~vTVh~~~G~~~~~~a~~~~~~~g~~~~~l 137 (255)
T 3ldv_A 66 FGPDFVRELHKRG--FSVFLDLKFHDIP-----NTCSKAVKAAAE-LGVWMVNVHASGGERMMAASREILEPYGKERPLL 137 (255)
T ss_dssp HHHHHHHHHHHTT--CCEEEEEEECSCH-----HHHHHHHHHHHH-TTCSEEEEEGGGCHHHHHHHHHHHGGGGGGSCEE
T ss_pred hCHHHHHHHHhcC--CCEEEEEecccch-----hHHHHHHHHHHh-cCCCEEEEeccCCHHHHHHHHHHHhhcCCCCceE
Confidence 4455677777754 8888777665433 344556665544 58999999997 677788887776543 234432
Q ss_pred --EeeCCCCccccccccccccC-CCCh-HHHHHHHHHHHHcCCeEEeecCCCchHHHHHHHHHHc
Q 019107 273 --IYPNSGETYNAELKKWVEST-GVRD-EDFVSYIGKWRDAGASLFGGCCRTTPNTIKAISRVLS 333 (346)
Q Consensus 273 --vypN~g~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~G~~ivGGCCGt~P~hI~al~~~~~ 333 (346)
|.-=. ..+. .+|.+.. ..+. +...++++.+.+.|+ .|==|+ |.+++.|++.+.
T Consensus 138 i~VtvLT--S~s~--~~l~~~g~~~~~~~~V~~~A~~a~~aG~--~GvV~s--a~e~~~iR~~~g 194 (255)
T 3ldv_A 138 IGVTVLT--SMES--ADLQGIGILSAPQDHVLRLATLTKNAGL--DGVVCS--AQEASLLKQHLG 194 (255)
T ss_dssp EEECSCT--TCCH--HHHHHTTCCSCHHHHHHHHHHHHHHTTC--SEEECC--HHHHHHHHHHHC
T ss_pred EEEEEEe--cCCH--HHHHhcCCCCCHHHHHHHHHHHHHHcCC--CEEEEC--HHHHHHHHHhcC
Confidence 22111 0111 1342211 1122 235556666667675 333355 668888888765
No 472
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=26.73 E-value=82 Score=29.24 Aligned_cols=50 Identities=18% Similarity=0.022 Sum_probs=33.9
Q ss_pred HHHHHHHhCCCCEEEEccCCC---HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc
Q 019107 172 RRVLILANSGADLIAFETIPN---KLEAKAYAELLEEEGITIPAWFSFNSKDGIN 223 (346)
Q Consensus 172 ~~i~~l~~~gvD~i~~ET~~~---~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~ 223 (346)
+.++.+.+.|++.|++|++.. ..++..+++.+.+.+ +||+++-.|.....
T Consensus 230 ~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~g--i~VV~~Sr~~~G~v 282 (330)
T 1wsa_A 230 VLVNAALQAGAKGIIHAGMGNGNPFPLTQNALEKAAKSG--VVVARSSRVGSGST 282 (330)
T ss_dssp HHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTT--CEEEEEESSSSSCB
T ss_pred HHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCC--CEEEEECCCCCCCc
Confidence 356677778999999998764 244555555445544 89988887765443
No 473
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=26.55 E-value=1.4e+02 Score=26.32 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=44.3
Q ss_pred CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHh---hcCCCceEEEECCC
Q 019107 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIA---DSCEQVVAVGINCT 251 (346)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~---~~~~~~~avGvNC~ 251 (346)
+|+ +.|+.+++.++.+-+++++.+..++|++.+... ....+.|-+.+++...+ ....++...|+-+.
T Consensus 98 ~~~--i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG-~e~~R~Gv~~ee~~~l~~~i~~l~~L~l~GlmTh 167 (244)
T 3r79_A 98 FDV--VESIDREKIARALSEECARQGRSLRFYVQVNTG-LEPQKAGIDPRETVAFVAFCRDELKLPVEGLMCI 167 (244)
T ss_dssp CSE--EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTT-CCTTSCSBCHHHHHHHHHHHHHTSCCCCCEEECC
T ss_pred CCE--EEeeCCHHHHHHHHHHHHHcCCCceEEEEEECC-CCcCCCCCCHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 565 489999999998888888777567777776432 11446787776655443 34455666666664
No 474
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=26.40 E-value=79 Score=31.12 Aligned_cols=95 Identities=16% Similarity=0.036 Sum_probs=51.8
Q ss_pred HHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHH-hCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC
Q 019107 173 RVLILANSGADLIAFETIPNKLEAKAYAELLEE-EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT 251 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~-~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~ 251 (346)
.++...+.|+|++=+|-. ...+.. +.+.+ .+.+..+++|+.-. ..+++-+.+.+.++.+.. .+++.+=+-+.
T Consensus 84 ll~~~~~~~~~yiDvEl~-~~~~~~---~~~~~~~~~~~kiI~S~H~f--~~tp~~~~~~~~~~~~~~-~gaDivKia~~ 156 (523)
T 2o7s_A 84 VLRLAMELGADYIDVELQ-VASEFI---KSIDGKKPGKFKVIVSSHNY--QNTPSVEDLDGLVARIQQ-TGADIVKIATT 156 (523)
T ss_dssp HHHHHHHHTCSEEEEEHH-HHHHHH---HHTTTCCCTTCEEEEEEECS--SCCCCHHHHHHHHHHHHT-TTCSEEEEEEE
T ss_pred HHHHHHHhCCCEEEEECC-CchHHH---HHHHHhccCCCEEEEEcccC--CCCcCHHHHHHHHHHHHH-hCCCEEEEEec
Confidence 344445567999999953 222322 22211 11247799998632 112233344445555543 46666666554
Q ss_pred --ChhhHHHHHHHHhhhcCCcEEEee
Q 019107 252 --SPRFIHGLILSVRKVTSKPVIIYP 275 (346)
Q Consensus 252 --~p~~~~~~l~~l~~~~~~pl~vyp 275 (346)
+++....+++-..+ ...|++++.
T Consensus 157 a~~~~D~~~l~~~~~~-~~~p~i~~~ 181 (523)
T 2o7s_A 157 AVDIADVARMFHITSK-AQVPTIGLV 181 (523)
T ss_dssp CSSGGGHHHHHHHHHH-CSSCEEEEE
T ss_pred CCCHHHHHHHHHHHhh-cCCCEEEEE
Confidence 56777777765443 367887764
No 475
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=26.37 E-value=1.1e+02 Score=27.54 Aligned_cols=46 Identities=24% Similarity=0.289 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.|.+.+..++++|..++ +|. -.+++|++.+++++++.+ +.+++.+.
T Consensus 77 ~h~~~~~~al~~G~~v~-~eKP~~~~~~~~~~l~~~a~~~g--~~~~~~~~ 124 (319)
T 1tlt_A 77 SHFDVVSTLLNAGVHVC-VDKPLAENLRDAERLVELAARKK--LTLMVGFN 124 (319)
T ss_dssp HHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred hHHHHHHHHHHcCCeEE-EeCCCCCCHHHHHHHHHHHHHcC--CeEEEeee
Confidence 46667777788898766 583 358999999999998865 66666553
No 476
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=26.29 E-value=2e+02 Score=21.45 Aligned_cols=77 Identities=10% Similarity=-0.019 Sum_probs=41.2
Q ss_pred HHHhCCCCEEEEccCCCHHHHHHHHHHHHH--hCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC-C
Q 019107 176 ILANSGADLIAFETIPNKLEAKAYAELLEE--EGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-S 252 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~--~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~-~ 252 (346)
.+.+...|+++++....-.....+++.+++ .....|+++-. +..+.......+. .+++.+-.-=. .
T Consensus 46 ~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s---------~~~~~~~~~~~~~--~ga~~~l~Kp~~~ 114 (144)
T 3kht_A 46 QVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILT---------DNVSDDRAKQCMA--AGASSVVDKSSNN 114 (144)
T ss_dssp HHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEE---------TTCCHHHHHHHHH--TTCSEEEECCTTS
T ss_pred HhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEe---------CCCCHHHHHHHHH--cCCCEEEECCCCc
Confidence 344567899998854322334455566665 22356766433 1223344444443 36677766655 6
Q ss_pred hhhHHHHHHHH
Q 019107 253 PRFIHGLILSV 263 (346)
Q Consensus 253 p~~~~~~l~~l 263 (346)
++.+...++.+
T Consensus 115 ~~~l~~~i~~~ 125 (144)
T 3kht_A 115 VTDFYGRIYAI 125 (144)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 65555555544
No 477
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=26.08 E-value=4.5e+02 Score=25.30 Aligned_cols=102 Identities=13% Similarity=0.092 Sum_probs=53.8
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHH---HHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEE
Q 019107 171 RRRVLILANSGADLIAFETIPNKL---EAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVG 247 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~---E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avG 247 (346)
++.++.+...+.|+++++|-+... +...-+..+.+.. .|.-+-|.++.. .|.+..+.+..+.....+.+|-
T Consensus 172 ~~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~--~pd~vlLVvDA~----~gq~a~~~a~~f~~~~~i~gVI 245 (443)
T 3dm5_A 172 KEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVI--HPHEVILVIDGT----IGQQAYNQALAFKEATPIGSII 245 (443)
T ss_dssp HHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHH--CCSEEEEEEEGG----GGGGHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhh--cCceEEEEEeCC----CchhHHHHHHHHHhhCCCeEEE
Confidence 345666666789999999987432 2222222222221 344444444321 2545555556665455788888
Q ss_pred ECCCC-hhhHHHHHHHHhhhcCCcEEEeeCCCCc
Q 019107 248 INCTS-PRFIHGLILSVRKVTSKPVIIYPNSGET 280 (346)
Q Consensus 248 vNC~~-p~~~~~~l~~l~~~~~~pl~vypN~g~~ 280 (346)
+|=.. ....-.++.. ...+..|+...- .|+-
T Consensus 246 lTKlD~~~~gG~~ls~-~~~~g~PI~fig-~Ge~ 277 (443)
T 3dm5_A 246 VTKLDGSAKGGGALSA-VAATGAPIKFIG-TGEK 277 (443)
T ss_dssp EECCSSCSSHHHHHHH-HHTTCCCEEEEE-CSSS
T ss_pred EECCCCcccccHHHHH-HHHHCCCEEEEE-cCCC
Confidence 88763 2222233333 334688975443 3543
No 478
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.02 E-value=2e+02 Score=21.34 Aligned_cols=77 Identities=8% Similarity=-0.065 Sum_probs=43.7
Q ss_pred HHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCChhh
Q 019107 176 ILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSPRF 255 (346)
Q Consensus 176 ~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p~~ 255 (346)
.+.+...|+++++.++... ...+++.+++.....|+++-. - ..+.......+. .+++.+-..-..++.
T Consensus 43 ~l~~~~~dlvi~d~~~~~~-g~~~~~~l~~~~~~~pii~ls-~--------~~~~~~~~~~~~--~g~~~~l~kP~~~~~ 110 (142)
T 2qxy_A 43 FLRREKIDLVFVDVFEGEE-SLNLIRRIREEFPDTKVAVLS-A--------YVDKDLIINSVK--AGAVDYILKPFRLDY 110 (142)
T ss_dssp HHTTSCCSEEEEECTTTHH-HHHHHHHHHHHCTTCEEEEEE-S--------CCCHHHHHHHHH--HTCSCEEESSCCHHH
T ss_pred HHhccCCCEEEEeCCCCCc-HHHHHHHHHHHCCCCCEEEEE-C--------CCCHHHHHHHHH--CCcceeEeCCCCHHH
Confidence 3445679999999855544 445566666655467776533 1 122333444443 255666555555666
Q ss_pred HHHHHHHHh
Q 019107 256 IHGLILSVR 264 (346)
Q Consensus 256 ~~~~l~~l~ 264 (346)
+...++.+.
T Consensus 111 l~~~i~~~~ 119 (142)
T 2qxy_A 111 LLERVKKII 119 (142)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665543
No 479
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=25.91 E-value=1e+02 Score=27.77 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEE
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWF 214 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~i 214 (346)
.+..++.+ .++.+.+.+|..|+.|...+..-++.+.+.+++.| .|+.+
T Consensus 196 ps~~~l~~----l~~~ik~~~v~~if~e~~~~~~~~~~l~~~a~~~g--~~v~~ 243 (282)
T 3mfq_A 196 VANSDMIE----TVNLIIDHNIKAIFTESTTNPERMKKLQEAVKAKG--GQVEV 243 (282)
T ss_dssp CCHHHHHH----HHHHHHHHTCCEEECBTTSCTHHHHHHHHHHHTTS--CCCEE
T ss_pred CCHHHHHH----HHHHHHHcCCCEEEEeCCCChHHHHHHHHHHHhcC--CceEE
Confidence 47766665 45556678999999999999888888888889877 66654
No 480
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=25.73 E-value=3.6e+02 Score=24.05 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=76.9
Q ss_pred HhCCCCEEEEc----cCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCc-----ccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 178 ANSGADLIAFE----TIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGIN-----VVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 178 ~~~gvD~i~~E----T~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~-----l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
....+|++=|- ++...+.++..++.+++.+ +++. + .++ +..| .+.+.++.+++ .+.++|=|
T Consensus 35 ~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~g--V~v~--~----GGTl~E~~~~qg-~~~~yl~~~k~-lGf~~iEi 104 (251)
T 1qwg_A 35 CGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWG--IKVY--P----GGTLFEYAYSKG-KFDEFLNECEK-LGFEAVEI 104 (251)
T ss_dssp HGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTT--CEEE--E----CHHHHHHHHHTT-CHHHHHHHHHH-HTCCEEEE
T ss_pred hhhhcceEEecCceeeecCHHHHHHHHHHHHHcC--CeEE--C----CcHHHHHHHHcC-cHHHHHHHHHH-cCCCEEEE
Confidence 34679999766 3334455888899999877 4444 3 222 1233 67777777766 48899989
Q ss_pred CCCC----hhhHHHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCeEE
Q 019107 249 NCTS----PRFIHGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGASLF 314 (346)
Q Consensus 249 NC~~----p~~~~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~iv 314 (346)
+-.. .+....+++.+++. -+-|.+.-|. +++ ......+|+.|.+.+++++++||..|
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~---G~~v~~EvG~-k~~-----~~~~~~~~~~~I~~~~~~LeAGA~~V 165 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDN---GFMVLTEVGK-KMP-----DKDKQLTIDDRIKLINFDLDAGADYV 165 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHT---TCEEEEEECC-SSH-----HHHTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred CCCcccCCHHHHHHHHHHHHHC---CCEEeeeccc-cCC-----cccCCCCHHHHHHHHHHHHHCCCcEE
Confidence 8852 45566677776543 2345555553 121 11233679999999999999998765
No 481
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=25.63 E-value=1e+02 Score=28.38 Aligned_cols=45 Identities=9% Similarity=0.065 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCCEEEEc--cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFE--TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~E--T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|..++ +| .-.+++|++.+++++++.+ +++.+.+
T Consensus 77 ~h~~~~~~al~aGkhVl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~ 123 (359)
T 3e18_A 77 SHKELAISALEAGKHVV-CEKPVTMTSEDLLAIMDVAKRVN--KHFMVHQ 123 (359)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHCCCCEE-eeCCCcCCHHHHHHHHHHHHHhC--CeEEEEe
Confidence 46677777778887755 57 3458899999999888875 5555544
No 482
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=25.61 E-value=2e+02 Score=21.03 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=34.1
Q ss_pred HHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCC-Chhh
Q 019107 177 LANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCT-SPRF 255 (346)
Q Consensus 177 l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~-~p~~ 255 (346)
+.+...|+++++....-.....+++.+++.....|+++-. +..+.......+. .+++++-.-=. .++.
T Consensus 47 l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t---------~~~~~~~~~~~~~--~g~~~~l~KP~~~~~~ 115 (130)
T 3eod_A 47 LGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVIS---------ATENMADIAKALR--LGVEDVLLKPVKDLNR 115 (130)
T ss_dssp HTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEE---------CCCCHHHHHHHHH--HCCSEEEESCC---CH
T ss_pred HhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEE---------cCCCHHHHHHHHH--cCCCEEEeCCCCcHHH
Confidence 3445678888874322223344455555544456665432 1122333343333 24555554444 4555
Q ss_pred HHHHHHHH
Q 019107 256 IHGLILSV 263 (346)
Q Consensus 256 ~~~~l~~l 263 (346)
+...++.+
T Consensus 116 l~~~i~~~ 123 (130)
T 3eod_A 116 LREMVFAC 123 (130)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 483
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=25.44 E-value=91 Score=28.26 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|.++++ |- -.+++|++.+++++++.+ +.+++.+
T Consensus 78 ~h~~~~~~al~aGkhVl~-EKP~a~~~~e~~~l~~~a~~~g--~~~~v~~ 124 (336)
T 2p2s_A 78 DRAELALRTLDAGKDFFT-AKPPLTTLEQLDAVQRRVAETG--RKFAVYF 124 (336)
T ss_dssp GHHHHHHHHHHTTCEEEE-CSSCCSCHHHHHHHHHHHHHHC--CCEEECC
T ss_pred hHHHHHHHHHHCCCcEEE-eCCCCCCHHHHHHHHHHHHHcC--CEEEEee
Confidence 466666667777776554 73 347778888888877765 5555444
No 484
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=25.32 E-value=2.6e+02 Score=25.33 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=11.5
Q ss_pred HHHHHHcCCeEEeec
Q 019107 303 IGKWRDAGASLFGGC 317 (346)
Q Consensus 303 ~~~~~~~G~~ivGGC 317 (346)
....+..||+.+||-
T Consensus 286 ~~~~l~~Gan~~~~~ 300 (350)
T 3t7v_A 286 MVLRLNAGANIVTSI 300 (350)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCceecCC
Confidence 345568899999986
No 485
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=25.31 E-value=3.8e+02 Score=24.21 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEccCCC-------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHH
Q 019107 161 VSLETLKEFHRRRVLILANSGADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILEC 233 (346)
Q Consensus 161 ~~~~e~~~~~~~~i~~l~~~gvD~i~~ET~~~-------~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~a 233 (346)
++.+++.+ +++.+.+.|+.-|.+ +... .+.+..+++.+++.. ++++ +++ .|....+.
T Consensus 91 ls~eei~~----~~~~~~~~G~~~i~l-~gGe~p~~~~~~~~~~~l~~~ik~~~-~i~i--~~s--------~g~~~~e~ 154 (350)
T 3t7v_A 91 LTMEEIKE----TCKTLKGAGFHMVDL-TMGEDPYYYEDPNRFVELVQIVKEEL-GLPI--MIS--------PGLMDNAT 154 (350)
T ss_dssp CCHHHHHH----HHHHHTTSCCSEEEE-EECCCHHHHHSTHHHHHHHHHHHHHH-CSCE--EEE--------CSSCCHHH
T ss_pred CCHHHHHH----HHHHHHHCCCCEEEE-eeCCCCccccCHHHHHHHHHHHHhhc-CceE--EEe--------CCCCCHHH
Confidence 58888877 445566788988877 3222 345566666666531 2443 332 23334566
Q ss_pred HHHhhcCCCceEEEECCCChhhH-HHHHHHHhhhcCCcEEEeeCCCCccccccccccccCCCChHHHHHHHHHHHHcCCe
Q 019107 234 ASIADSCEQVVAVGINCTSPRFI-HGLILSVRKVTSKPVIIYPNSGETYNAELKKWVESTGVRDEDFVSYIGKWRDAGAS 312 (346)
Q Consensus 234 v~~~~~~~~~~avGvNC~~p~~~-~~~l~~l~~~~~~pl~vypN~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 312 (346)
++.+.+ .+++.+.++= +.. ..+.+.+.. + .+.+++.+.++.+.+.|..
T Consensus 155 l~~L~~-aG~~~i~i~l---Et~~~~~~~~i~~------------~---------------~~~~~~l~~i~~a~~~Gi~ 203 (350)
T 3t7v_A 155 LLKARE-KGANFLALYQ---ETYDTELYRKLRV------------G---------------QSFDGRVNARRFAKQQGYC 203 (350)
T ss_dssp HHHHHH-TTEEEEECCC---BCSCHHHHHHHST------------T---------------CCHHHHHHHHHHHHHHTCE
T ss_pred HHHHHH-cCCCEEEEee---ecCCHHHHHHhCC------------C---------------CCHHHHHHHHHHHHHcCCe
Confidence 666655 3666555432 111 223333321 0 1245666667777777755
Q ss_pred E----EeecCCCchHHHHHHHHHHcCCCC
Q 019107 313 L----FGGCCRTTPNTIKAISRVLSNKSL 337 (346)
Q Consensus 313 i----vGGCCGt~P~hI~al~~~~~~~~~ 337 (346)
+ +=|- |-|++++..+.+.++..++
T Consensus 204 v~~~~i~Gl-get~e~~~~~l~~l~~l~~ 231 (350)
T 3t7v_A 204 VEDGILTGV-GNDIESTILSLRGMSTNDP 231 (350)
T ss_dssp EEEEEEESS-SCCHHHHHHHHHHHHHTCC
T ss_pred EccceEeec-CCCHHHHHHHHHHHHhCCC
Confidence 2 2233 7788888887777766544
No 486
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=25.25 E-value=39 Score=30.49 Aligned_cols=29 Identities=28% Similarity=0.300 Sum_probs=25.4
Q ss_pred cCCChHHHHHHHHHHHHhhcceeeccc-cc
Q 019107 50 LVSSPHLVRKVHLDYLDAGANIIITAS-YQ 78 (346)
Q Consensus 50 ll~~Pe~V~~iH~~yl~AGA~iI~TnT-y~ 78 (346)
++++++.++..-+-=++||||.|.|.| |.
T Consensus 145 ~L~d~e~i~~a~~ia~eaGADfVKTSTGf~ 174 (260)
T 1p1x_A 145 ELKDEALIRKASEISIKAGADFIKTSTGKV 174 (260)
T ss_dssp HHCSHHHHHHHHHHHHHTTCSEEECCCSCS
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEEeCCCCC
Confidence 357889899999999999999999999 54
No 487
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=25.18 E-value=2.3e+02 Score=26.28 Aligned_cols=71 Identities=18% Similarity=0.193 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhCC--CCEEEEccCCC-------HHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHH
Q 019107 164 ETLKEFHRRRVLILANSG--ADLIAFETIPN-------KLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECA 234 (346)
Q Consensus 164 ~e~~~~~~~~i~~l~~~g--vD~i~~ET~~~-------~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av 234 (346)
+.+.+..++..+...+.| +. |.+|+++. +.....+.+.+++.+ .|-.+.+.++..-....|.++.+.+
T Consensus 155 ~~~~e~L~~l~~~A~~~G~~v~-l~lE~~~~e~~~~~~~~t~~~~~~li~~v~--~pn~vgl~lD~~H~~~~g~d~~~~l 231 (386)
T 1muw_A 155 DRMKEAFDLLGEYVTSQGYDIR-FAIEPKPNEPRGDILLPTVGHALAFIERLE--RPELYGVNPEVGHEQMAGLNFPHGI 231 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCE-EEECCCSSSSSSEESSCSHHHHHHHHTTSS--SGGGEEECCBHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCeE-EEEeeCCCCCcccccCCCHHHHHHHHHHhC--CccceEEEeeccchhhcCCCHHHHH
Confidence 444555555555555677 54 56798742 122333444455544 4411233332222244788888777
Q ss_pred HHh
Q 019107 235 SIA 237 (346)
Q Consensus 235 ~~~ 237 (346)
..+
T Consensus 232 ~~~ 234 (386)
T 1muw_A 232 AQA 234 (386)
T ss_dssp HHH
T ss_pred HHh
Confidence 655
No 488
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=25.06 E-value=3.3e+02 Score=23.82 Aligned_cols=79 Identities=10% Similarity=-0.011 Sum_probs=47.9
Q ss_pred HHHHHHhCCCCEEEEc--cCC-CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEEC
Q 019107 173 RVLILANSGADLIAFE--TIP-NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGIN 249 (346)
Q Consensus 173 ~i~~l~~~gvD~i~~E--T~~-~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvN 249 (346)
.++.+...|+|++++. .-| +.++++..+.+++. + +.|+||-+. +.+... +..+.. .++++|.+-
T Consensus 32 ~~e~a~~~gaD~v~lDlEd~p~~~~~a~~~~~~~~~-~-~~~~~VRv~---------~~~~~~-i~~~l~-~g~~gI~~P 98 (256)
T 1dxe_A 32 STEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKG-S-ASAPVVRVP---------TNEPVI-IKRLLD-IGFYNFLIP 98 (256)
T ss_dssp HHHHHTTSCCSEEEEESSSSSCCHHHHHHHHHHTTT-C-SSEEEEECS---------SSCHHH-HHHHHH-TTCCEEEES
T ss_pred HHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHHHHh-C-CCcEEEECC---------CCCHHH-HHHHHh-cCCceeeec
Confidence 3556777999999874 433 45566666666543 2 477776552 111222 333323 367888888
Q ss_pred CC-ChhhHHHHHHHHh
Q 019107 250 CT-SPRFIHGLILSVR 264 (346)
Q Consensus 250 C~-~p~~~~~~l~~l~ 264 (346)
-+ +++.+..+.+.++
T Consensus 99 ~V~s~~ev~~~~~~~~ 114 (256)
T 1dxe_A 99 FVETKEEAELAVASTR 114 (256)
T ss_dssp CCCSHHHHHHHHHTTS
T ss_pred CcCCHHHHHHHHHHhc
Confidence 76 6788877766653
No 489
>4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens}
Probab=25.05 E-value=1.8e+02 Score=26.98 Aligned_cols=47 Identities=15% Similarity=0.082 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCC--CEEEEc------cCCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 168 EFHRRRVLILANSGA--DLIAFE------TIPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 168 ~~~~~~i~~l~~~gv--D~i~~E------T~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
+.+...++.|.+.|+ |.|=++ ..|+..+++..++.+.+.| +||+||=
T Consensus 191 ~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~p~~~~~~~~l~~~a~lG--l~v~iTE 245 (335)
T 4f8x_A 191 TAVLQLVSNLRKRGIRIDGVGLESHFIVGETPSLADQLATKQAYIKAN--LDVAVTE 245 (335)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETTCCCCHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred HHHHHHHHHHHHCCCCcceeeeeeeecCCCCCCHHHHHHHHHHHHHcC--CeeEEee
Confidence 456678888888775 777443 3578889999999999877 9999885
No 490
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=24.92 E-value=90 Score=27.52 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=21.9
Q ss_pred HHHHHHhCCCCE--EEEccCCCHHHHHHHHHHHHHh
Q 019107 173 RVLILANSGADL--IAFETIPNKLEAKAYAELLEEE 206 (346)
Q Consensus 173 ~i~~l~~~gvD~--i~~ET~~~~~E~~a~~~a~~~~ 206 (346)
-++.+.++|+|. +-.|+-.++ ..+++.+++.
T Consensus 84 ~i~~~~~aGAd~itvH~ea~~~~---~~~i~~i~~~ 116 (237)
T 3cu2_A 84 VAKAVVANGANLVTLQLEQYHDF---ALTIEWLAKQ 116 (237)
T ss_dssp HHHHHHHTTCSEEEEETTCTTSH---HHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEecCCcccH---HHHHHHHHhc
Confidence 366788899999 677876554 4566666665
No 491
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=24.86 E-value=1.1e+02 Score=27.66 Aligned_cols=45 Identities=16% Similarity=0.166 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+++..++++|..+ ++|- -.+++|++.+++++++.+ +.+++.+
T Consensus 78 ~H~~~~~~al~~GkhV-l~EKP~a~~~~e~~~l~~~a~~~~--~~~~v~~ 124 (334)
T 3ohs_X 78 QHKAAVMLCLAAGKAV-LCEKPMGVNAAEVREMVTEARSRG--LFLMEAI 124 (334)
T ss_dssp GHHHHHHHHHHTTCEE-EEESSSSSSHHHHHHHHHHHHHTT--CCEEEEC
T ss_pred HHHHHHHHHHhcCCEE-EEECCCCCCHHHHHHHHHHHHHhC--CEEEEEE
Confidence 4677777788888764 4583 358999999999988865 6666655
No 492
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=24.78 E-value=4.2e+02 Score=24.48 Aligned_cols=65 Identities=2% Similarity=-0.132 Sum_probs=40.6
Q ss_pred HHHHHHHhC--CCCEEEEcc-CCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEE
Q 019107 172 RRVLILANS--GADLIAFET-IPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGI 248 (346)
Q Consensus 172 ~~i~~l~~~--gvD~i~~ET-~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGv 248 (346)
++++.+.+. |+|++.+.+ ..+.......++.+++...++|+++.. ..+.+++....+ .++++|-+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~----------v~t~e~A~~a~~--aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGN----------VVTGEMVEELIL--SGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEE----------ECSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEe----------CCCHHHHHHHHH--hCCCEEEE
Confidence 456667765 899988764 234444555666676652258888643 235667766554 47888766
No 493
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=24.70 E-value=4.1e+02 Score=24.39 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=46.2
Q ss_pred HHHHHHHHhCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEc-------CCCcccCCCCHHHHHHHhhcCCCc
Q 019107 171 RRRVLILANSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSK-------DGINVVSGDSILECASIADSCEQV 243 (346)
Q Consensus 171 ~~~i~~l~~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~-------~~~~l~~G~~~~~av~~~~~~~~~ 243 (346)
++.+..+.+.|||.++. | +.+. +-+ -++-... .+.++-|+... +..+-..+.+++++++. ++
T Consensus 74 ~~~~~~~~~~Gvdavl~-~-~gi~--~d~-~Li~~L~-~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~Avrl-----GA 142 (307)
T 3fok_A 74 ERMAIALSRPGVDGVLG-T-PDII--DDL-AALGLLD-DKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDR-----GV 142 (307)
T ss_dssp HHHHHHHHSTTCCEEEE-C-HHHH--HHH-HHTTCCT-TCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHHH-----TC
T ss_pred HHHHHHHhccCCCEEEE-C-cchh--hcc-cceEEec-CcccccccCccccccCCCCccccccccCHHHHHHC-----CC
Confidence 55677888999999985 2 2221 111 1111111 25555556531 22223466788888753 45
Q ss_pred eEEE----ECCCChhhHHHHHHHHhhh------cCCcEEEe
Q 019107 244 VAVG----INCTSPRFIHGLILSVRKV------TSKPVIIY 274 (346)
Q Consensus 244 ~avG----vNC~~p~~~~~~l~~l~~~------~~~pl~vy 274 (346)
++++ +|=.++.. ...|+.+.+. ...|+++.
T Consensus 143 DaV~~l~~i~~Gs~~e-~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 143 DFAKTLVRINLSDAGT-APTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp CEEEEEEEECTTCTTH-HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEEEECCCChhH-HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 6655 45444422 2233322221 36787663
No 494
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=24.67 E-value=1.1e+02 Score=28.13 Aligned_cols=45 Identities=13% Similarity=0.240 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|..+++ |- -.+++|++.+++++++.+ +.+.+.+
T Consensus 77 ~H~~~~~~al~aGkhVl~-EKPla~~~~e~~~l~~~a~~~g--~~~~v~~ 123 (358)
T 3gdo_A 77 LHYEHTMACIQAGKHVVM-EKPMTATAEEGETLKRAADEKG--VLLSVYH 123 (358)
T ss_dssp THHHHHHHHHHTTCEEEE-ESSCCSSHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEE-ecCCcCCHHHHHHHHHHHHHcC--CeEEEee
Confidence 467777888889987665 84 468999999999998876 6666655
No 495
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=24.62 E-value=1.8e+02 Score=27.32 Aligned_cols=152 Identities=11% Similarity=0.032 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHhCCCCEE-----EEccCC--CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhc
Q 019107 167 KEFHRRRVLILANSGADLI-----AFETIP--NKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADS 239 (346)
Q Consensus 167 ~~~~~~~i~~l~~~gvD~i-----~~ET~~--~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~ 239 (346)
.+|-+..++.+.+ .|+++ +||.+. -+..++.+++.+++.+ .+|+.=+-+.|-+. +...+++.+-.
T Consensus 105 ~~f~~~iida~~~-~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~g--~~VflDlK~~DIgn-----Tv~~ya~a~~~ 176 (352)
T 2fds_A 105 NHFCFYIINNTKE-YALIYKMNFAFYIPYGSVGINALKNVFDYLNSMN--IPTMLDMKINDIGN-----TVKNYRKFIFE 176 (352)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEECCCHH-----HHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc-ccCEEEecHHHHHhCCHHHHHHHHHHHHHHHHCC--CeEEEEeecCchHH-----HHHHHHHHHHh
Confidence 3444555665553 45554 233321 2334445556777755 89998877655443 34444444433
Q ss_pred CCCceEEEECCC-ChhhHHHHHHHHhhh-cCCcE-E-EeeCCCCcccccccccccc---CCCC-hHHHHHHHHHHH-HcC
Q 019107 240 CEQVVAVGINCT-SPRFIHGLILSVRKV-TSKPV-I-IYPNSGETYNAELKKWVES---TGVR-DEDFVSYIGKWR-DAG 310 (346)
Q Consensus 240 ~~~~~avGvNC~-~p~~~~~~l~~l~~~-~~~pl-~-vypN~g~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~-~~G 310 (346)
..+++++-|++. +.+.+.++++..... .+.++ + +.-|.+. .++... .... .+...+.+.+|. +.|
T Consensus 177 ~lgaD~vTVh~~~G~~sl~~a~~~~a~~~gkgv~lLa~TSn~~~------~dlq~~~~~~g~~l~~~v~~~v~~la~~~G 250 (352)
T 2fds_A 177 YLKSDSCTINVYMGTSMLKDICFDYEKNKYYSAYVLIKTTNKDS------FIFQNELSINDKQAYIVMAEETQKMATDLK 250 (352)
T ss_dssp TSCCSEEEECCTTCSTTHHHHSEETTTTEECEEEEEEECSSGGG------HHHHTTCEETTEEHHHHHHHHHHHHHHHHT
T ss_pred hcCCCEEEEeCCCCHHHHHHHHHHHhhccCCceEEEEEeCCcCH------HHHHHhhccCCCcHHHHHHHHHHHHHHHhC
Confidence 257999999997 567777765433211 11232 2 2233321 111110 0000 122556665664 445
Q ss_pred Ce----EEeecCC-CchHHHHHHHHHH
Q 019107 311 AS----LFGGCCR-TTPNTIKAISRVL 332 (346)
Q Consensus 311 ~~----ivGGCCG-t~P~hI~al~~~~ 332 (346)
+. -+|--|| |.|+.++.|++.+
T Consensus 251 ~d~~~~~~GvVvGaTs~~e~~~iR~~~ 277 (352)
T 2fds_A 251 IDQNNEFIGFVVGSNAFEEMKIIRNKF 277 (352)
T ss_dssp TGGGTCCEEEEECTTCHHHHHHHHHHS
T ss_pred CCccCCcceEEEcCCCHHHHHHHHHhC
Confidence 42 2455455 5788889988765
No 496
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=24.58 E-value=1.1e+02 Score=27.73 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSF 216 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~ 216 (346)
.|.+.+..++++|.+++ +|. -.++.|++.+++++++.+ +.+++.+
T Consensus 76 ~h~~~~~~al~~gk~v~-~EKP~~~~~~e~~~l~~~a~~~g--~~~~v~~ 122 (344)
T 3ezy_A 76 THSELVIACAKAKKHVF-CEKPLSLNLADVDRMIEETKKAD--VILFTGF 122 (344)
T ss_dssp GHHHHHHHHHHTTCEEE-EESCSCSCHHHHHHHHHHHHHHT--CCEEEEC
T ss_pred chHHHHHHHHhcCCeEE-EECCCCCCHHHHHHHHHHHHHhC--CcEEEee
Confidence 46666777778887765 584 468889999998888865 5555554
No 497
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=24.57 E-value=4.4e+02 Score=24.66 Aligned_cols=70 Identities=21% Similarity=0.200 Sum_probs=42.1
Q ss_pred hCCCCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCC-----------cccCCC---C--HHHHHHHhhcCCC
Q 019107 179 NSGADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGI-----------NVVSGD---S--ILECASIADSCEQ 242 (346)
Q Consensus 179 ~~gvD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~-----------~l~~G~---~--~~~av~~~~~~~~ 242 (346)
+.++-.+ ++.+..|++.+.+++++.+...+|++-+....+. ..+-|- . +.++++.+....+
T Consensus 125 ~~~i~~~---~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~tG~~~~rfG~~~~~~~~~~~~~~~~~~~~ 201 (434)
T 1twi_A 125 EANIRAF---NVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEY 201 (434)
T ss_dssp HTTCSEE---EECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHHHHHHHHCSS
T ss_pred HCCCCEE---EECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCCCCCcccccCCCCCCccCChhhhHHHHHHHHHHhCCC
Confidence 3554334 4567888888888777766456777777653210 123443 3 5556666655456
Q ss_pred ceEEEECCC
Q 019107 243 VVAVGINCT 251 (346)
Q Consensus 243 ~~avGvNC~ 251 (346)
+...|+-|.
T Consensus 202 l~l~Gl~~H 210 (434)
T 1twi_A 202 VNVVGVHCH 210 (434)
T ss_dssp EEEEEEECC
T ss_pred CCEEEEEEE
Confidence 777777763
No 498
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.54 E-value=1.4e+02 Score=23.38 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=36.0
Q ss_pred CCEEEEccCCCHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCcccCCCCHHHHHHHhhcCCCceEEEECCCCh
Q 019107 182 ADLIAFETIPNKLEAKAYAELLEEEGITIPAWFSFNSKDGINVVSGDSILECASIADSCEQVVAVGINCTSP 253 (346)
Q Consensus 182 vD~i~~ET~~~~~E~~a~~~a~~~~~~~~pv~is~~~~~~~~l~~G~~~~~av~~~~~~~~~~avGvNC~~p 253 (346)
+|+..+-+ ..+....+++.+.+.+. +-+|++ .|..=.++++.+++ .++-.+| ||...
T Consensus 59 vDlavi~~--p~~~v~~~v~e~~~~g~-k~v~~~----------~G~~~~e~~~~a~~-~Girvv~-nC~gv 115 (122)
T 3ff4_A 59 VDTVTLYI--NPQNQLSEYNYILSLKP-KRVIFN----------PGTENEELEEILSE-NGIEPVI-GCTLV 115 (122)
T ss_dssp CCEEEECS--CHHHHGGGHHHHHHHCC-SEEEEC----------TTCCCHHHHHHHHH-TTCEEEE-SCHHH
T ss_pred CCEEEEEe--CHHHHHHHHHHHHhcCC-CEEEEC----------CCCChHHHHHHHHH-cCCeEEC-CcCeE
Confidence 89988754 44556666666666663 346643 12222567777765 5788899 99753
No 499
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=24.47 E-value=1.1e+02 Score=28.02 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.|.+.+..++++|..++ +|- -.+++|++.+++++++.+ +.+++.+.
T Consensus 101 ~h~~~~~~al~aGk~Vl-~EKP~a~~~~ea~~l~~~a~~~g--~~~~v~~~ 148 (350)
T 3rc1_A 101 LHAEWIDRALRAGKHVL-AEKPLTTDRPQAERLFAVARERG--LLLMENFM 148 (350)
T ss_dssp GHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHTT--CCEEEECG
T ss_pred HHHHHHHHHHHCCCcEE-EeCCCCCCHHHHHHHHHHHHHhC--CEEEEEec
Confidence 46677777888898744 583 348899999999988865 66666553
No 500
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=24.43 E-value=1e+02 Score=28.34 Aligned_cols=46 Identities=13% Similarity=0.187 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCCEEEEcc--CCCHHHHHHHHHHHHHhCCCCcEEEEEE
Q 019107 169 FHRRRVLILANSGADLIAFET--IPNKLEAKAYAELLEEEGITIPAWFSFN 217 (346)
Q Consensus 169 ~~~~~i~~l~~~gvD~i~~ET--~~~~~E~~a~~~a~~~~~~~~pv~is~~ 217 (346)
.|.+.+..++++|..++ +|- -.+++|++.+++++++.+ +++++.|.
T Consensus 80 ~H~~~~~~al~aGkhVl-~EKPla~~~~e~~~l~~~a~~~g--~~~~v~~~ 127 (359)
T 3m2t_A 80 LHFEMGLLAMSKGVNVF-VEKPPCATLEELETLIDAARRSD--VVSGVGMN 127 (359)
T ss_dssp HHHHHHHHHHHTTCEEE-ECSCSCSSHHHHHHHHHHHHHHT--CCEEECCH
T ss_pred HHHHHHHHHHHCCCeEE-EECCCcCCHHHHHHHHHHHHHcC--CEEEEEec
Confidence 57778888888898755 472 358889999999988876 66665553
Done!