Query 019112
Match_columns 346
No_of_seqs 301 out of 1860
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:04:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 4.4E-86 1.5E-90 625.6 35.2 308 27-345 51-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 4.9E-86 1.7E-90 620.0 31.7 309 29-345 9-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 6.2E-86 2.1E-90 621.1 31.9 304 33-345 13-331 (331)
4 1by8_A Protein (procathepsin K 100.0 7.3E-85 2.5E-89 610.5 31.1 303 35-345 4-314 (314)
5 3qt4_A Cathepsin-L-like midgut 100.0 5.5E-85 1.9E-89 613.3 29.9 303 33-345 18-329 (329)
6 2c0y_A Procathepsin S; proenzy 100.0 9.9E-85 3.4E-89 609.9 29.3 304 33-345 3-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 5.9E-84 2E-88 604.9 30.1 300 37-345 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 6.1E-83 2.1E-87 596.5 28.0 294 40-345 3-306 (310)
9 1xkg_A DER P I, major mite fec 100.0 3.6E-79 1.2E-83 570.3 24.7 289 41-345 7-302 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.6E-72 5.4E-77 546.0 24.2 281 57-344 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 5.3E-71 1.8E-75 518.3 20.4 275 60-345 2-312 (325)
12 3p5u_A Actinidin; SAD, cystein 100.0 8.8E-67 3E-71 466.0 23.5 212 131-345 1-217 (220)
13 1cqd_A Protein (protease II); 100.0 1.7E-66 5.9E-71 464.2 24.0 212 130-345 2-217 (221)
14 1ppo_A Protease omega; hydrola 100.0 1.5E-66 5.3E-71 463.0 23.6 211 131-345 1-215 (216)
15 3pbh_A Procathepsin B; thiol p 100.0 7E-67 2.4E-71 489.4 22.2 261 69-344 11-313 (317)
16 1iwd_A Ervatamin B; cysteine p 100.0 2.4E-66 8.3E-71 461.2 23.9 210 131-345 1-214 (215)
17 1yal_A Chymopapain; hydrolase, 100.0 3.1E-66 1.1E-70 461.6 24.2 211 131-345 1-215 (218)
18 3kwz_A Cathepsin K; enzyme inh 100.0 3E-66 1E-70 461.2 23.3 211 131-345 1-215 (215)
19 3ovx_A Cathepsin S; hydrolase, 100.0 4.7E-66 1.6E-70 460.9 22.4 211 131-345 2-218 (218)
20 1s4v_A Cysteine endopeptidase; 100.0 1.3E-65 4.3E-70 460.9 23.5 214 130-345 1-219 (229)
21 2cio_A Papain; hydrolase/inhib 100.0 2.2E-65 7.5E-70 454.3 23.8 207 131-345 1-211 (212)
22 1o0e_A Ervatamin C; plant cyst 100.0 2.9E-65 1E-69 452.0 23.7 205 131-345 1-207 (208)
23 2xu3_A Cathepsin L1; hydrolase 100.0 3.7E-65 1.3E-69 455.6 23.9 213 131-345 1-220 (220)
24 3ioq_A CMS1MS2; caricaceae, cy 100.0 2.7E-65 9.4E-70 454.1 23.0 207 131-345 1-211 (213)
25 2fo5_A Cysteine proteinase EP- 100.0 2E-65 6.7E-70 466.8 22.1 215 129-345 2-224 (262)
26 8pch_A Cathepsin H; hydrolase, 100.0 2.4E-65 8.2E-70 457.0 21.6 211 131-346 1-219 (220)
27 3u8e_A Papain-like cysteine pr 100.0 1.4E-65 4.8E-70 458.8 20.1 209 131-345 1-219 (222)
28 3i06_A Cruzipain; autocatalyti 100.0 6.3E-65 2.2E-69 452.4 23.5 208 131-345 1-214 (215)
29 2bdz_A Mexicain; cysteine prot 100.0 4.8E-65 1.6E-69 452.6 22.6 207 131-345 1-211 (214)
30 1m6d_A Cathepsin F, catsf; pap 100.0 5.9E-65 2E-69 452.3 22.8 208 131-345 1-213 (214)
31 2b1m_A SPE31; papain-like, sug 100.0 1.1E-64 3.8E-69 459.1 23.7 210 130-345 1-224 (246)
32 3f75_A Toxopain-2, cathepsin L 100.0 3.3E-65 1.1E-69 457.3 20.0 215 129-345 5-224 (224)
33 2oul_A Falcipain 2; cysteine p 100.0 7.9E-65 2.7E-69 459.1 22.2 214 128-345 15-240 (241)
34 3bwk_A Cysteine protease falci 100.0 9.1E-65 3.1E-69 459.2 21.6 214 128-345 17-242 (243)
35 3f5v_A DER P 1 allergen; aller 100.0 1.5E-64 5.2E-69 452.3 20.2 210 129-345 8-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 5.7E-60 1.9E-64 433.5 21.1 210 129-345 5-257 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 1E-59 3.5E-64 429.1 22.5 211 130-346 2-254 (254)
38 1deu_A Procathepsin X; cystein 100.0 8.4E-60 2.9E-64 434.0 21.8 211 127-345 32-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 8.7E-54 3E-58 392.6 21.5 210 133-344 9-260 (265)
40 3ois_A Cysteine protease; alph 100.0 6.7E-52 2.3E-56 384.5 15.7 231 84-330 14-272 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 3.3E-41 1.1E-45 324.7 15.3 196 130-330 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 1.9E-40 6.6E-45 319.7 16.8 206 130-344 52-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 5E-35 1.7E-39 276.3 15.8 184 142-330 21-356 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 2.4E-19 8.3E-24 139.4 9.5 76 33-109 16-91 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 2E-18 6.9E-23 128.3 6.6 68 39-108 7-77 (80)
46 1pxv_A Cysteine protease; hydr 97.5 0.0014 4.7E-08 54.3 11.5 129 147-330 25-162 (183)
47 1x9y_A Cysteine proteinase; ha 97.4 0.0027 9.3E-08 58.0 13.6 120 147-316 201-329 (367)
48 1cv8_A Staphopain; cysteine pr 97.3 0.0051 1.8E-07 50.8 12.9 120 147-316 16-144 (174)
49 3erv_A Putative C39-like pepti 81.0 5.8 0.0002 34.5 8.2 55 242-299 125-187 (236)
50 1dki_A Pyrogenic exotoxin B zy 58.8 23 0.00077 33.0 7.2 53 250-328 290-343 (371)
51 3bb7_A Interpain A; cysteine p 52.0 26 0.0009 31.8 6.3 59 250-329 239-298 (321)
52 4d8b_A Streptopain; papain fol 51.1 28 0.00096 30.6 6.1 51 250-328 172-225 (261)
53 2j4t_A Angiogenin-4; angiogene 35.1 12 0.0004 29.9 1.0 11 40-50 27-37 (144)
54 2r9f_A Calpain-1 catalytic sub 26.3 60 0.0021 29.6 4.3 40 289-328 246-312 (339)
55 3lay_A Zinc resistance-associa 22.1 19 0.00064 29.7 0.0 24 3-26 25-48 (175)
56 3arc_L Photosystem II reaction 21.3 76 0.0026 18.6 2.5 19 4-22 11-29 (37)
57 1ziv_A Calpain 9; cysteine pro 20.3 94 0.0032 28.2 4.4 40 289-328 245-312 (339)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=4.4e-86 Score=625.58 Aligned_cols=308 Identities=40% Similarity=0.761 Sum_probs=270.8
Q ss_pred hccCCCCCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCC
Q 019112 27 VVSGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGY 106 (346)
Q Consensus 27 ~~~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~ 106 (346)
-+..++.+++.+.++|++|+++|+|.|.+.+|+.+|++||++|+++|++||++. .+|++|+|+|+|||.+||++++++.
T Consensus 51 y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~-~sy~~g~N~FaDlT~eEf~~~~~~~ 129 (363)
T 3tnx_A 51 YSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKN-NSYWLGLNVFADMSNDEFKEKYTGS 129 (363)
T ss_dssp ---CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSC-CSEEECSCTTTTSCHHHHHHHHSCS
T ss_pred CChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEeccccccCCHHHHHHHhccc
Confidence 345667889999999999999999999999999999999999999999999974 8999999999999999999999886
Q ss_pred CCCCCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhc
Q 019112 107 NRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDC 186 (346)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c 186 (346)
.+........ ...........+||++||||++|+||||||||.||||||||+++++|++++++++.++.||+|+|+||
T Consensus 130 ~~~~~~~~~~--~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC 207 (363)
T 3tnx_A 130 IAGNYTTTEL--SYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDC 207 (363)
T ss_dssp SCSCCCCSSS--SSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHH
T ss_pred cccccccccc--ccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcc
Confidence 6543211111 01111122234799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEE
Q 019112 187 STDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVE 266 (346)
Q Consensus 187 ~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~ 266 (346)
+..+.||+||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++..++.++++|||+|+++
T Consensus 208 ~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~ 286 (363)
T 3tnx_A 208 DRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLE 286 (363)
T ss_dssp CTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEEC
T ss_pred cCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEE
Confidence 9989999999999999999875 999999999999888887664555567788888888888999999999999999999
Q ss_pred eccccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCccee
Q 019112 267 ASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASY 342 (346)
Q Consensus 267 ~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~ 342 (346)
+...+|++|++|||..+|+..++|||+|||||+ +|||||||||++|||+|||||+||. |.|||+++|+|
T Consensus 287 a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-------~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y 359 (363)
T 3tnx_A 287 AAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-------NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY 359 (363)
T ss_dssp CCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET-------TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred ecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC-------CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence 877899999999999999988999999999985 4999999999999999999999995 56999999999
Q ss_pred eee
Q 019112 343 PVA 345 (346)
Q Consensus 343 p~~ 345 (346)
|+.
T Consensus 360 Pik 362 (363)
T 3tnx_A 360 PVK 362 (363)
T ss_dssp EEC
T ss_pred ccc
Confidence 983
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=4.9e-86 Score=620.03 Aligned_cols=309 Identities=43% Similarity=0.841 Sum_probs=272.5
Q ss_pred cCCCCCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCCCC
Q 019112 29 SGRSMHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNR 108 (346)
Q Consensus 29 ~~~~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 108 (346)
..++.+++++..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++..+
T Consensus 9 ~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~ 87 (322)
T 1pci_A 9 QDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLI 87 (322)
T ss_dssp ---CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBC
T ss_pred cccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCC
Confidence 344556788899999999999999998899999999999999999999987 5799999999999999999998887654
Q ss_pred CCCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCC
Q 019112 109 PVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCST 188 (346)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~ 188 (346)
+.+..... ...+......+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.
T Consensus 88 ~~~~~~~~---~~~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~ 164 (322)
T 1pci_A 88 DATIEQSY---DEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER 164 (322)
T ss_dssp CCSSCCCC---SEECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT
T ss_pred cccccccc---ccccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC
Confidence 32211000 111222233579999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEec
Q 019112 189 DNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEAS 268 (346)
Q Consensus 189 ~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~ 268 (346)
.+.||+||.+..|++|+.++ |+++|++|||.+.++.|.........+++.+|..++.+++++|+++|++|||+|+|++.
T Consensus 165 ~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v~i~~~ 243 (322)
T 1pci_A 165 RSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESK 243 (322)
T ss_dssp TSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTTCCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEEEECTT
T ss_pred CCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCCCCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEEEEecc
Confidence 67899999999999999987 89999999999999999876333456789999999878899999999999999999997
Q ss_pred cccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeee
Q 019112 269 GQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPV 344 (346)
Q Consensus 269 ~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~ 344 (346)
..+|++|++|||.++|+..++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 244 ~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~yp~ 320 (322)
T 1pci_A 244 GRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKS---GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPT 320 (322)
T ss_dssp CHHHHTEEEEEECCSCCSCCCEEEEEEEEEEE---TTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEEEC
T ss_pred cccccccCCeEeCCCCCCCCCEEEEEEEEecc---CCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeEEE
Confidence 57899999999998898888999999999998 7999999999999999999999999996 9999999999998
Q ss_pred e
Q 019112 345 A 345 (346)
Q Consensus 345 ~ 345 (346)
+
T Consensus 321 ~ 321 (322)
T 1pci_A 321 K 321 (322)
T ss_dssp C
T ss_pred e
Confidence 6
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=6.2e-86 Score=621.12 Aligned_cols=304 Identities=39% Similarity=0.736 Sum_probs=271.4
Q ss_pred CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCC
Q 019112 33 MHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRP 109 (346)
Q Consensus 33 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 109 (346)
..+..+..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++..++
T Consensus 13 ~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~ 92 (331)
T 3qj3_A 13 LPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMP 92 (331)
T ss_dssp CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccc
Confidence 56778899999999999999999899999999999999999999986 568999999999999999999998876653
Q ss_pred CCCCCcCCCCCCccccC------CCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCC--CcccCHH
Q 019112 110 VPSVSRQSSRPSTFKYQ------NVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGK--LIELSEQ 181 (346)
Q Consensus 110 ~~~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q 181 (346)
.... .. ...+... ...+||++||||++|+||||||||.||||||||++++||++++++++. .++||+|
T Consensus 93 ~~~~-~~---~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ 168 (331)
T 3qj3_A 93 ADLH-KN---GIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQ 168 (331)
T ss_dssp SSTT-TT---CEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHH
T ss_pred cccc-cc---CcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHH
Confidence 2210 00 1111111 224799999999999999999999999999999999999999999998 8999999
Q ss_pred HHhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCC
Q 019112 182 QLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQP 260 (346)
Q Consensus 182 ~l~~c~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gP 260 (346)
+|+||+..+.||+||++..|++|+.++.|+++|++|||.+.++.|... ......++.+|..++..++++|+++|+ +||
T Consensus 169 ~LvdC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GP 247 (331)
T 3qj3_A 169 QLVDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYD-PNQVAARLSGYVYLSGPDENMLADMVATKGP 247 (331)
T ss_dssp HHHHHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-TTSEEECCSEEEEESSCCHHHHHHHHHHHCC
T ss_pred HHhhhccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCC-cccceeEeeEEEEeCCCCHHHHHHHHHhCCC
Confidence 999999888999999999999999987899999999999999999876 445677899999998778999999998 699
Q ss_pred eEEEEEeccccccccCCceEeCC-CC-CCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC-Cccccc
Q 019112 261 VSVCVEASGQAFRFYKRGVLNAE-CG-DNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIA 337 (346)
Q Consensus 261 V~v~~~~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~ 337 (346)
|+|+|++.. +|++|++|||..+ |+ ..++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+
T Consensus 248 V~v~i~a~~-~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~ 323 (331)
T 3qj3_A 248 VAVAFDADD-PFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE---NGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIA 323 (331)
T ss_dssp EEEEECCCT-TGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTT
T ss_pred EEEEEEccc-ccccccCceEeCCCCCCCcCCEEEEEEEEecc---CCceEEEEEcCCCCCcCCCCEEEEEcCCCCccCcC
Confidence 999999984 5999999999986 75 578999999999987 7999999999999999999999999997 999999
Q ss_pred Ccceeeee
Q 019112 338 TEASYPVA 345 (346)
Q Consensus 338 ~~~~~p~~ 345 (346)
+.++||++
T Consensus 324 ~~~~~p~v 331 (331)
T 3qj3_A 324 GVASVPTL 331 (331)
T ss_dssp TSCEEEEC
T ss_pred CceeeeeC
Confidence 99999985
No 4
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=7.3e-85 Score=610.50 Aligned_cols=303 Identities=43% Similarity=0.809 Sum_probs=267.0
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCCCC
Q 019112 35 EPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRPVP 111 (346)
Q Consensus 35 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~ 111 (346)
+.++..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||+++++|..++..
T Consensus 4 ~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 83 (314)
T 1by8_A 4 EEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLS 83 (314)
T ss_dssp -CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSC
T ss_pred cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcc
Confidence 346788999999999999998899999999999999999999985 34799999999999999999988887654322
Q ss_pred CCCcCCCCCCccccC-CCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCC
Q 019112 112 SVSRQSSRPSTFKYQ-NVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDN 190 (346)
Q Consensus 112 ~~~~~~~~~~~~~~~-~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~ 190 (346)
.. .. ...+... ....||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+..+
T Consensus 84 ~~-~~---~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~ 159 (314)
T 1by8_A 84 HS-RS---NDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEN 159 (314)
T ss_dssp CC-CS---SSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTS
T ss_pred cc-cC---CccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCC
Confidence 11 00 1112111 1223999999999999999999999999999999999999999999999999999999999778
Q ss_pred CCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEecc
Q 019112 191 NGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASG 269 (346)
Q Consensus 191 ~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~ 269 (346)
.||+||++..|++|+.++.|+++|++|||.+.++.|... ......++.+|..++..++++|+++|+ +|||+|+|++..
T Consensus 160 ~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i~~~~ 238 (314)
T 1by8_A 160 DGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASL 238 (314)
T ss_dssp CGGGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCC-GGGCCBCCSCEEECCSSCHHHHHHHHHHHCCEEEEECCCS
T ss_pred CCCcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCC-CccceeEECcEEEecCCCHHHHHHHHHHcCCEEEEEEeCh
Confidence 899999999999999866799999999999999999865 334567899999998778999999998 699999999986
Q ss_pred ccccccCCceEeCC-CCC-CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcC-CCcccccCcceeeee
Q 019112 270 QAFRFYKRGVLNAE-CGD-NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD-EGLCGIATEASYPVA 345 (346)
Q Consensus 270 ~~f~~y~~Gi~~~~-~~~-~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~-~~~cgi~~~~~~p~~ 345 (346)
.+|++|++|||..+ |+. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+ .|.|||++.++||++
T Consensus 239 ~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 239 TSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ---KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314 (314)
T ss_dssp HHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE---TTEEEEEEECSBTTTSTBTTEEEECCSSSCGGGTTSSCEEECC
T ss_pred HHhhhccCceecCCCCCCCCCCeEEEEEEEecc---CCceEEEEEcCCCCCcCcCCEEEEEcCCCCcCCccCeeEEeeC
Confidence 68999999999987 875 78999999999998 789999999999999999999999999 599999999999984
No 5
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=5.5e-85 Score=613.27 Aligned_cols=303 Identities=40% Similarity=0.793 Sum_probs=265.8
Q ss_pred CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCC
Q 019112 33 MHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRP 109 (346)
Q Consensus 33 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 109 (346)
.++.++..+|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++ +++.+++
T Consensus 18 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~ 96 (329)
T 3qt4_A 18 LPKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKA 96 (329)
T ss_dssp --CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCC
T ss_pred cCHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccc
Confidence 45678889999999999999999889999999999999999999985 5689999999999999999998 7765532
Q ss_pred CCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC
Q 019112 110 VPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD 189 (346)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~ 189 (346)
.... ........+.... .+||++||||++ +||||||||.||||||||++++||++++++++++++||||+|+||+..
T Consensus 97 ~~~~-~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~ 173 (329)
T 3qt4_A 97 QKPK-HPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSS 173 (329)
T ss_dssp C-------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG
T ss_pred cccc-ccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccc
Confidence 1100 0000011111122 479999999999 999999999999999999999999999999999999999999999974
Q ss_pred --CCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEE
Q 019112 190 --NNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVE 266 (346)
Q Consensus 190 --~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~ 266 (346)
+.||+||.+..|++|+.++ |+++|++|||.+.++.|... ......++.+|..++..++++|+++|+ +|||+|+|+
T Consensus 174 ~g~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~ 251 (329)
T 3qt4_A 174 YGNAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFD-SSQSVTTLSGYYDLPSGDENSLADAVGQAGPVAVAID 251 (329)
T ss_dssp GTCCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECCTTCHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCC-cccceEEeceEEEecCCCHHHHHHHHHhCCCEEEEEe
Confidence 7899999999999999998 99999999999999999876 445667899999999889999999998 699999999
Q ss_pred eccccccccCCceEeCC-CC-CCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceee
Q 019112 267 ASGQAFRFYKRGVLNAE-CG-DNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYP 343 (346)
Q Consensus 267 ~~~~~f~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p 343 (346)
+. .+|++|++|||..+ |+ ..++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||++.++||
T Consensus 252 a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~yp 327 (329)
T 3qt4_A 252 AT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD---NGQDYWILKNSWGSGWGESGYWRQVRNYGNNCGIATAASYP 327 (329)
T ss_dssp CC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTTTCEEE
T ss_pred cC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee---CCccEEEEEeCCCCcccCCcEEEEEeCCCCccCCCCceeEe
Confidence 98 49999999999986 85 678999999999998 7999999999999999999999999997 999999999999
Q ss_pred ee
Q 019112 344 VA 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 328 ~v 329 (329)
T 3qt4_A 328 AL 329 (329)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=9.9e-85 Score=609.86 Aligned_cols=304 Identities=44% Similarity=0.821 Sum_probs=267.1
Q ss_pred CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCC
Q 019112 33 MHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRP 109 (346)
Q Consensus 33 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 109 (346)
..+.++.++|++|+++|+|.|.+.+|+.+|+.||++|+++|++||++ +..+|++|+|+|+|||.+||++++++..++
T Consensus 3 ~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~ 82 (315)
T 2c0y_A 3 HKDPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVP 82 (315)
T ss_dssp CCCGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCC
T ss_pred cchHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCC
Confidence 34567888999999999999988889999999999999999999975 347999999999999999998888876543
Q ss_pred CCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcC-C
Q 019112 110 VPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCS-T 188 (346)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~-~ 188 (346)
.... . ...+......+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+ .
T Consensus 83 ~~~~--~---~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~ 157 (315)
T 2c0y_A 83 SQWQ--R---NITYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTE 157 (315)
T ss_dssp CGGG--S---CBCC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCG
T ss_pred cccc--C---CccccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhccc
Confidence 3210 1 11111111236999999999999999999999999999999999999999999999999999999999 4
Q ss_pred --CCCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEE
Q 019112 189 --DNNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCV 265 (346)
Q Consensus 189 --~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~ 265 (346)
.+.||+||++..|++|+.++.|+++|++|||.+.++.|... ......++.+|..++..++++|+++|+ +|||+|+|
T Consensus 158 ~~~~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~al~~~GPV~v~i 236 (315)
T 2c0y_A 158 KYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGV 236 (315)
T ss_dssp GGTCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccC-CcccccccCCeEEeCCCCHHHHHHHHHHcCCEEEEE
Confidence 37899999999999999866799999999999999999865 334567899999998778999999998 69999999
Q ss_pred EeccccccccCCceEeCC-CCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcC-CCcccccCcceee
Q 019112 266 EASGQAFRFYKRGVLNAE-CGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD-EGLCGIATEASYP 343 (346)
Q Consensus 266 ~~~~~~f~~y~~Gi~~~~-~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~-~~~cgi~~~~~~p 343 (346)
++...+|++|++|||..+ |+..++|||+|||||++ +|.+|||||||||++|||+|||||+|+ .|.|||++.++||
T Consensus 237 ~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p 313 (315)
T 2c0y_A 237 DARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL---NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYP 313 (315)
T ss_dssp CCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEE
T ss_pred ecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeec---CCCcEEEEEcCCCCCcCCCcEEEEEcCCCCccCcCceeEEe
Confidence 998668999999999987 88889999999999998 789999999999999999999999999 5999999999999
Q ss_pred ee
Q 019112 344 VA 345 (346)
Q Consensus 344 ~~ 345 (346)
++
T Consensus 314 ~~ 315 (315)
T 2c0y_A 314 EI 315 (315)
T ss_dssp EC
T ss_pred eC
Confidence 85
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=5.9e-84 Score=604.85 Aligned_cols=300 Identities=45% Similarity=0.878 Sum_probs=263.0
Q ss_pred hHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCCCCCCC
Q 019112 37 SIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSV 113 (346)
Q Consensus 37 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~ 113 (346)
.+.++|++|+++|+|.| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++..++...
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 57789999999999999 7789999999999999999999985 357999999999999999999888876543211
Q ss_pred CcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CC
Q 019112 114 SRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NN 191 (346)
Q Consensus 114 ~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~ 191 (346)
. ...+......+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.
T Consensus 85 --~---~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 --K---GKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp --C---CEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred --c---CccccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 1 1111111223699999999999999999999999999999999999999999999999999999999863 78
Q ss_pred CCCCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccc
Q 019112 192 GCSGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQ 270 (346)
Q Consensus 192 gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~ 270 (346)
||+||++..|++|+.++.|+++|++|||.+.++.|... ......++.+|..++. ++++|+++|+ +|||+|+|++...
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~i~~~~~ 237 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 237 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCS-CHHHHHHHHHHHCCEEEEECCCSH
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCC-CccceeEeccEEEeCC-CHHHHHHHHHhcCCEEEEEecCCh
Confidence 99999999999999866799999999999999999876 3445688999999986 8999999998 6999999999856
Q ss_pred cccccCCceEeCC-CCC-CCCeeEEEEEeeccccC-CCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceeeee
Q 019112 271 AFRFYKRGVLNAE-CGD-NCDHGVAVVGFGTAEEE-DGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYPVA 345 (346)
Q Consensus 271 ~f~~y~~Gi~~~~-~~~-~~~Hav~iVGyg~~~~~-~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p~~ 345 (346)
+|++|++|||..+ |+. .++|||+|||||++... +|.+|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 238 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 238 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316 (316)
T ss_dssp HHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEECC
T ss_pred hhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCCCccCccceeeEeeC
Confidence 8999999999987 875 78999999999942222 6899999999999999999999999996 89999999999985
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=6.1e-83 Score=596.48 Aligned_cols=294 Identities=40% Similarity=0.782 Sum_probs=257.9
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcC-CCCCCCCCCc
Q 019112 40 EKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTG-YNRPVPSVSR 115 (346)
Q Consensus 40 ~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~-~~~~~~~~~~ 115 (346)
++|++|+++|+|.|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.+||++++++ ..++......
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~~ 81 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSH 81 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSCS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCccccccc
Confidence 58999999999999888899999 9999999999999985 35799999999999999999988887 4432211000
Q ss_pred CCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCC
Q 019112 116 QSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGC 193 (346)
Q Consensus 116 ~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc 193 (346)
...+..... +||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+.. +.||
T Consensus 82 ----~~~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC 156 (310)
T 2o6x_A 82 ----GVPYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGC 156 (310)
T ss_dssp ----SEECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGG
T ss_pred ----CCccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCC
Confidence 011111122 699999999999999999999999999999999999999999999999999999999863 7899
Q ss_pred CCCchHHHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccc
Q 019112 194 SGGLMDKAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAF 272 (346)
Q Consensus 194 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f 272 (346)
+||++..|++|+. +.|+++|++|||.+.++.|... ......++.+|..++..++++|+++|+ +|||+|+|++. .+|
T Consensus 157 ~GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~v~i~~~-~~f 233 (310)
T 2o6x_A 157 GGGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYN-KQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVE-SDF 233 (310)
T ss_dssp GCCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCC-GGGCCEEEEEEEEECSCCHHHHHHHHHHHCCEEEEECCC-HHH
T ss_pred CCCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCC-CCCCceEeCeEEEeCCCCHHHHHHHHHhcCCeEEEEecc-hhh
Confidence 9999999999998 5699999999999999999875 334567899999998778999999998 69999999998 699
Q ss_pred cccCCceEeCC-CC-CCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceeeee
Q 019112 273 RFYKRGVLNAE-CG-DNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYPVA 345 (346)
Q Consensus 273 ~~y~~Gi~~~~-~~-~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p~~ 345 (346)
++|++|||..+ |+ ..++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 234 ~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~~n~Cgi~~~~~~p~~ 306 (310)
T 2o6x_A 234 MMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ---GGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLASLPMV 306 (310)
T ss_dssp HTEEEEEECCSSCCTTCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSEEEEEE
T ss_pred hhCCCceecCCCCCCCCCCEEEEEEEEecc---CCceEEEEEeCCCCccCCCcEEEEEcCCCCcCCccceeeEEEe
Confidence 99999999865 87 478999999999998 7999999999999999999999999996 89999999999985
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=3.6e-79 Score=570.34 Aligned_cols=289 Identities=28% Similarity=0.529 Sum_probs=248.5
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCCCCCCCCCCcCCCCC
Q 019112 41 KHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRP 120 (346)
Q Consensus 41 ~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~ 120 (346)
+|++|+++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.+||++++++...+...........
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-~------g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~~~~~ 78 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-G------AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLN 78 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-C------CCCTTTTSCHHHHHHHHSBCHHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-C------CCCcccCCCHHHHHHHhcCCCCccccccCCcccc
Confidence 59999999999999889999999999999999999 74 1 9999999999999987776322110000000000
Q ss_pred Cc-cccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchH
Q 019112 121 ST-FKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMD 199 (346)
Q Consensus 121 ~~-~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~ 199 (346)
.. .......+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. ..||+||++.
T Consensus 79 ~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~GC~GG~~~ 157 (312)
T 1xkg_A 79 AETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS-QHGCHGDTIP 157 (312)
T ss_dssp ---CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-SSTTBCCCHH
T ss_pred cccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC-CCCCCCCCHH
Confidence 00 000112379999999999999999999999999999999999999999999999999999999982 2899999999
Q ss_pred HHHHHHHHcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh--cCCeEEEEEeccc-cccccC
Q 019112 200 KAFEYIIENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT--KQPVSVCVEASGQ-AFRFYK 276 (346)
Q Consensus 200 ~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~--~gPV~v~~~~~~~-~f~~y~ 276 (346)
.|++|+.+. |+++|++|||.+..+.|. . .....+++++|..++..++++|+++|+ +|||+|+|++... +|++|+
T Consensus 158 ~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~-~~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v~i~~~~~~~f~~Y~ 234 (312)
T 1xkg_A 158 RGIEYIQHN-GVVQESYYRYVAREQSCR-R-PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYD 234 (312)
T ss_dssp HHHHHHHHH-CEEBGGGSCCCSSCCCCC-C-CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCC
T ss_pred HHHHHHHHc-CCCccccCCccCCCCCCC-C-CCCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEEEEEecccccccccC
Confidence 999999984 999999999999999998 4 344578899999998778999999997 4999999999843 899999
Q ss_pred CceEeCC-CC-C-CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeeee
Q 019112 277 RGVLNAE-CG-D-NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVA 345 (346)
Q Consensus 277 ~Gi~~~~-~~-~-~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~~ 345 (346)
+|||..+ |+ . . +|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||++.++||++
T Consensus 235 ~GVy~~~~c~~~~~-~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~GY~~i~r~~n~CgI~~~~~~~~~ 302 (312)
T 1xkg_A 235 GRTIIQRDNGYQPN-YHAVNIVGYSNA---QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 302 (312)
T ss_dssp SSSCBCCCCSSCCE-EEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTCCEEEEC
T ss_pred CcEEcCCCCCCCcC-ceEEEEEEEecc---CCceEEEEEeCCCCcccCCcEEEEEcCCCcccccceeEEeec
Confidence 9999986 76 4 6 999999999998 799999999999999999999999999999999999999985
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.6e-72 Score=546.00 Aligned_cols=281 Identities=28% Similarity=0.520 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCceEEE-cccCCCCCHHHHhhhhcCCCCCCCCCCcCCCCCCccccCCCCCCCCce
Q 019112 57 LEKAMRLTIFKQNLEYIEKANKEGNRTYKLG-TNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSI 135 (346)
Q Consensus 57 ~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g-~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~ 135 (346)
.|+.+|+.||++|+++|++||++. .+|+++ +|+|+|||.+||++++++..++.+..... +..........+||++|
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~-~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~lP~s~ 211 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQ-KSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPA--PLTAEIQQKILFLPTSW 211 (441)
T ss_dssp --------------------------------------------------------------------------CCCSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHccC-CceEeecccccccCCHHHHHHHhCCCcccccccccC--ccccccccccccCCCCE
Confidence 467899999999999999999875 799998 89999999999999887654332110000 00111112345799999
Q ss_pred eccccC---CcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCc--ccCHHHHhhcCCCCCCCCCCchHHH-HHHHHHcC
Q 019112 136 DWREKG---AVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLI--ELSEQQLVDCSTDNNGCSGGLMDKA-FEYIIENK 209 (346)
Q Consensus 136 Dwr~~g---~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~--~lS~q~l~~c~~~~~gc~GG~~~~a-~~~~~~~~ 209 (346)
|||+.+ +|+||||||.||||||||++++||++++++++... .||||+|+||+..+.||+||.+..+ ++|+.+.
T Consensus 212 DwR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~~~- 290 (441)
T 3pdf_A 212 DWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDF- 290 (441)
T ss_dssp ETTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHHHT-
T ss_pred ECCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHHhc-
Confidence 999964 89999999999999999999999999999998764 4999999999988899999999987 8999876
Q ss_pred CCCCCCCcCCCCCCCcccccccccceeeeceeEeCC----CCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCC
Q 019112 210 GLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLP----KGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAEC 284 (346)
Q Consensus 210 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~----~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 284 (346)
|+++|++|||.+.++.|... .......+.+|..++ ..++++|+++|+ +|||+|+|++. ++|++|++|||..++
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~-~~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~~Y~sGVy~~~~ 368 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMK-EDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFLHYKKGIYHHTG 368 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCC-SSCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGGGCCSSEECCC-
T ss_pred CCCcHHHeeecccCCCCCCc-cccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-ccccccCCceEecCC
Confidence 99999999999999999875 334456778888875 357899999987 89999999997 799999999998763
Q ss_pred C-------CCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeee
Q 019112 285 G-------DNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPV 344 (346)
Q Consensus 285 ~-------~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~ 344 (346)
. ..++|||+|||||++. .+|.+|||||||||++|||+|||||+|+.|.|||++.++++.
T Consensus 369 ~~~~~~~~~~~~HaV~iVGyG~~~-~~G~~YWIVkNSWG~~WGe~GYfri~rg~n~CGI~s~~~a~~ 434 (441)
T 3pdf_A 369 LRDPFNPFELTNHAVLLVGYGTDS-ASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAAT 434 (441)
T ss_dssp --CCCCCCCCCCEEEEEEEEEECT-TTCCEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCCEEEE
T ss_pred CCcccCCCCcCCeEEEEEEecccC-CCCceEEEEEcCCCCCcCCCeEEEEEcCCCccCCCCceEEee
Confidence 2 2489999999999852 268999999999999999999999999999999999988754
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=5.3e-71 Score=518.34 Aligned_cols=275 Identities=26% Similarity=0.505 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCceEEEcc-cCCCCCHHHHhhhhcCCCCCCCCCCcCCCCCCcccc-CCCCCCCCceec
Q 019112 60 AMRLTIFKQNLEYIEKANKEGNRTYKLGTN-EFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKY-QNVTDVPTSIDW 137 (346)
Q Consensus 60 ~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N-~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lP~~~Dw 137 (346)
..|...+..+.++|++||++++.+|++|+| +|+|||.|||+++ +|..+........ ....+.. ....+||++|||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~lP~s~Dw 78 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASIL--PKRRFTEEEARAPLPSSFDS 78 (325)
T ss_dssp -------------------------------------------------------CCS--CBCCCCHHHHHCCCCSCEEH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccc--cCccccccccccCCCCcEeh
Confidence 356777888999999999976689999999 8999999999976 4443322110000 0011111 112479999999
Q ss_pred ccc----CCcccccCCCCCccHHHHHHHHHHHHHHHHhcCC-CcccCHHHHhhcCCC-CCCCCCCchHHHHHHHHHcCCC
Q 019112 138 REK----GAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGK-LIELSEQQLVDCSTD-NNGCSGGLMDKAFEYIIENKGL 211 (346)
Q Consensus 138 r~~----g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~-~~~lS~q~l~~c~~~-~~gc~GG~~~~a~~~~~~~~Gi 211 (346)
|++ |.|+||||||.||||||||++++||++++++++. .++||||+|+||+.. +.||+||++..|++|+.++ |+
T Consensus 79 R~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi 157 (325)
T 3hhi_A 79 AEAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GL 157 (325)
T ss_dssp HHHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CB
T ss_pred hHhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CC
Confidence 998 8999999999999999999999999999999987 899999999999874 7899999999999999987 99
Q ss_pred CCCCCcCCC-CC----------CCcccccc---------------cccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEE
Q 019112 212 ATEADYPYQ-QE----------QGTCDKQK---------------EKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVC 264 (346)
Q Consensus 212 ~~e~~yPY~-~~----------~~~c~~~~---------------~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~ 264 (346)
++|++|||. +. .+.|.... .......+..|. + .++++|+++|+ +|||+|+
T Consensus 158 ~~e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~ 234 (325)
T 3hhi_A 158 VSDYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVA 234 (325)
T ss_dssp CBTTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEE
T ss_pred CcccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEE
Confidence 999999998 32 25665100 001123456676 4 58999999997 8999999
Q ss_pred EEeccccccccCCceEeCCCCC-CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceee
Q 019112 265 VEASGQAFRFYKRGVLNAECGD-NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYP 343 (346)
Q Consensus 265 ~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p 343 (346)
|++. ++|++|++|||..+|+. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||+++++++
T Consensus 235 i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~---~g~~YWivkNSWG~~WGe~GY~~i~rg~n~CGI~~~~~~g 310 (325)
T 3hhi_A 235 FDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS---NGVPYWKIANSWNTEWGMDGYFLIRRGSSECGIEDGGSAG 310 (325)
T ss_dssp EEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTSCEEEE
T ss_pred EEec-cccccccCceecCCCCCCCCCEEEEEEEEEec---CCceEEEEEeCCCCCcccCCEEEEEcCCCeecCccceEEe
Confidence 9997 79999999999988654 46999999999987 8999999999999999999999999999999999999987
Q ss_pred ee
Q 019112 344 VA 345 (346)
Q Consensus 344 ~~ 345 (346)
+.
T Consensus 311 ~p 312 (325)
T 3hhi_A 311 IP 312 (325)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 12
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=8.8e-67 Score=466.05 Aligned_cols=212 Identities=52% Similarity=1.048 Sum_probs=198.3
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCCCCCchHHHHHHHHHc
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMDKAFEYIIEN 208 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc~GG~~~~a~~~~~~~ 208 (346)
||++||||++|+++||||||.||||||||++++||+++++++++.++||||+|++|+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999986 7899999999999999987
Q ss_pred CCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCC
Q 019112 209 KGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNC 288 (346)
Q Consensus 209 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 288 (346)
.|+++|++|||...++.|..........++.+|..++..++++|+++|.+|||++++++..++|++|++|||..+|+...
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~ 160 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSSGIFTGPCGTAV 160 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCSC
T ss_pred CCcCcccccccccCCCCcCcCCCCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccCceECCCCCCcc
Confidence 79999999999999999987544444578999999987889999999999999999999767899999999999898889
Q ss_pred CeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCC---cccccCcceeeee
Q 019112 289 DHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEG---LCGIATEASYPVA 345 (346)
Q Consensus 289 ~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~---~cgi~~~~~~p~~ 345 (346)
+|||+|||||++ +|++|||||||||++|||+|||||+|+.| .|||++.++||++
T Consensus 161 ~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~Cgi~~~~~~p~~ 217 (220)
T 3p5u_A 161 DHAVTIVGYGTE---GGIDYWIVKNSWGTTWGEEGYMRIQRNVGGVGQCGIAKKASYPVK 217 (220)
T ss_dssp CEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECCCCTTCGGGTTSSCEEEEC
T ss_pred ceEEEEEEEecC---CCceEEEEECCCCCCcccCCEEEEECCCCCCCccCcccccceEEE
Confidence 999999999987 78999999999999999999999999976 9999999999985
No 13
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.7e-66 Score=464.20 Aligned_cols=212 Identities=53% Similarity=1.068 Sum_probs=197.7
Q ss_pred CCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcC
Q 019112 130 DVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENK 209 (346)
Q Consensus 130 ~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~ 209 (346)
+||++||||++|+++||||||.||||||||++++||++++++++..++||+|+|++|+..+.||+||++..|++|+.++.
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~ 81 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNG 81 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999997788999999999999999877
Q ss_pred CCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCC
Q 019112 210 GLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCD 289 (346)
Q Consensus 210 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~ 289 (346)
|+++|++|||....+.|... .....+++++|..++..++++|+++|++|||+++|++..++|++|++|||..+|+..++
T Consensus 82 Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~ 160 (221)
T 1cqd_A 82 GINSEETYPYRGQDGICNST-VNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTGSCNISAN 160 (221)
T ss_dssp SBCBTTTSCCCSSCCCCCSS-SCCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCCCCCCCC
T ss_pred CccccccCCccCCCCCcCCC-CCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccCccccCCCCCcCC
Confidence 99999999999998999865 33456789999999877899999999999999999997668999999999998888899
Q ss_pred eeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcC----CCcccccCcceeeee
Q 019112 290 HGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD----EGLCGIATEASYPVA 345 (346)
Q Consensus 290 Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~----~~~cgi~~~~~~p~~ 345 (346)
|||+|||||++ +|.+|||||||||++|||+|||||+|+ .|.|||+++++||++
T Consensus 161 HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 217 (221)
T 1cqd_A 161 HALTVVGYGTE---NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVK 217 (221)
T ss_dssp EEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eEEEEEEEccc---CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEe
Confidence 99999999998 789999999999999999999999998 489999999999985
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=1.5e-66 Score=462.95 Aligned_cols=211 Identities=49% Similarity=0.975 Sum_probs=197.0
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||+|+|++|+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999767899999999999999987 8
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||....+.|.........+++.+|..++.+++++|+++|++|||+++|++..++|++|++|||..+|++..+|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (216)
T 1ppo_A 80 IHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDH 159 (216)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCCSCCCE
T ss_pred cCccccCCccCCCCCcCCCCCCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCceECCCCCCCCCE
Confidence 99999999999989998763334568899999998778999999999999999999965789999999999888888899
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~~---~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 160 AVTAVGYGKS---GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EEEEEEEEEE---TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred EEEEEEeecc---CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 9999999998 7899999999999999999999999994 89999999999986
No 15
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=7e-67 Score=489.43 Aligned_cols=261 Identities=29% Similarity=0.602 Sum_probs=211.1
Q ss_pred HHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCCCCCCCCCCcCCCCCCccccCCCCCCCCceecccc----CCcc
Q 019112 69 NLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREK----GAVT 144 (346)
Q Consensus 69 n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~ 144 (346)
+.++|++||++ +.+|++|+| |+|++.||++. ++|..+..... ...+......+||++||||++ +.|+
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~------~~~~~~~~~~~lP~s~DwR~~~~~c~~vt 81 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKP------PQRVMFTEDLKLPASFDAREQWPQCPTIK 81 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCC------SEEECCCSCCCCCSSEEHHHHCTTCGGGT
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCcccc------CcccccccccCCCCCEechhccCCCCCcC
Confidence 46789999976 489999999 99988877765 56665433211 111112223579999999997 6899
Q ss_pred cccCCCCCccHHHHHHHHHHHHHHHHhcCC--CcccCHHHHhhcCC--CCCCCCCCchHHHHHHHHHcCCCCCCCCc---
Q 019112 145 HIKNQGHCGSCWAFSAVAAVEGITQITGGK--LIELSEQQLVDCST--DNNGCSGGLMDKAFEYIIENKGLATEADY--- 217 (346)
Q Consensus 145 pVkdQg~cGsCwAfA~~~~le~~~~~~~~~--~~~lS~q~l~~c~~--~~~gc~GG~~~~a~~~~~~~~Gi~~e~~y--- 217 (346)
||||||.||||||||++++||++++++++. .+.||+|+|+||+. .+.||+||++..|++|+.++ |+++|++|
T Consensus 82 pVkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~ 160 (317)
T 3pbh_A 82 EIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESH 160 (317)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCC
T ss_pred CccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCC
Confidence 999999999999999999999999999864 78999999999986 37899999999999999987 99999888
Q ss_pred ----CCCC---------CCCccccc---------ccc--cc-----eeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEe
Q 019112 218 ----PYQQ---------EQGTCDKQ---------KEK--AA-----AATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEA 267 (346)
Q Consensus 218 ----PY~~---------~~~~c~~~---------~~~--~~-----~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~ 267 (346)
||.. ..+.|... +.. .. .........++ .++++|+++|+ +|||+|+|++
T Consensus 161 ~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~ 239 (317)
T 3pbh_A 161 VGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSV 239 (317)
T ss_dssp CBSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEE
T ss_pred CCCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEe
Confidence 9984 33455421 000 00 00111223454 57899999997 8999999999
Q ss_pred ccccccccCCceEeCCCCCC-CCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeee
Q 019112 268 SGQAFRFYKRGVLNAECGDN-CDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPV 344 (346)
Q Consensus 268 ~~~~f~~y~~Gi~~~~~~~~-~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~ 344 (346)
. ++|++|++|||.++|+.. ++|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||++.++.++
T Consensus 240 ~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~---~g~~YWivkNSWG~~WGe~GY~ri~rg~n~CgI~~~~~a~~ 313 (317)
T 3pbh_A 240 Y-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE---NGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 313 (317)
T ss_dssp E-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEECC
T ss_pred c-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe---CCeeEEEEEcCCCCCcCCCcEEEEEcCCCcccCCCceEeee
Confidence 7 799999999999987654 5999999999987 89999999999999999999999999999999999988754
No 16
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=2.4e-66 Score=461.20 Aligned_cols=210 Identities=51% Similarity=1.036 Sum_probs=196.8
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||+|+|+||+..+.||+||++..|++|+.++.|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGG 80 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999977889999999999999998779
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||...++.|.... ...+++.+|..++..++++|+++|++|||++++++...+|++|++|||..+|+..++|
T Consensus 81 i~~e~~yPY~~~~~~C~~~~--~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 158 (215)
T 1iwd_A 81 IDTQQNYPYSAVQGSCKPYR--LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNH 158 (215)
T ss_dssp BCBTTTSCCCSSCCCCCTTC--CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCCCE
T ss_pred cccccccCccCCCCCCCCCC--CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCceECCCCCCcCCE
Confidence 99999999999989998753 3567899999998778999999998999999999984589999999999988888899
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 159 aV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 159 GVVIVGYGTQ---SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEEecc---CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 9999999998 7899999999999999999999999996 89999999999986
No 17
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=3.1e-66 Score=461.63 Aligned_cols=211 Identities=49% Similarity=0.973 Sum_probs=196.9
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||+|+|++|...+.+|+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-G 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 699999999999999999999999999999999999999999999999999999999668899999999999999987 8
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||....+.|.........+++.+|..++.+++++|+++|++|||++++++..++|++|++|||..+|++.++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (218)
T 1yal_A 80 VHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDGPCGTKLDH 159 (218)
T ss_dssp BCBTTTSCCCSSCCCCCGGGCCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccccccCCCCCcccCcCCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCceECCCCCCCCCE
Confidence 99999999999989998763334568899999998778999999999999999999975789999999999888888899
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 215 (218)
T 1yal_A 160 AVTAVGYGTS---DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFK 215 (218)
T ss_dssp EEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEEC
T ss_pred EEEEEEeecc---CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEE
Confidence 9999999998 7899999999999999999999999994 89999999999985
No 18
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=3e-66 Score=461.21 Aligned_cols=211 Identities=49% Similarity=0.960 Sum_probs=196.7
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+|+||||||.||||||||+++++|++++++++..++||+|+|++|...+.||+||++..|++|+.++.|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 80 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999987899999999999999988779
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCC-CC-CC
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE-CG-DN 287 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~-~~ 287 (346)
+++|++|||...++.|... ......++.+|..++..++++||++|+ +|||++++++..++|++|++|||..+ |. ..
T Consensus 81 i~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~~~~ 159 (215)
T 3kwz_A 81 IDSEDAYPYVGQEESCMYN-PTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDN 159 (215)
T ss_dssp EEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCTTC
T ss_pred ccccccCCCccCCCccccC-CCCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccCCeECCCCCCCCh
Confidence 9999999999999999866 344567899999998778999999998 79999999998668999999999876 74 57
Q ss_pred CCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceeeee
Q 019112 288 CDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYPVA 345 (346)
Q Consensus 288 ~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p~~ 345 (346)
++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 160 ~~HaV~iVGyg~~---~g~~yWivkNSWG~~WG~~Gy~~i~r~~~n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 160 LNHAVLAVGYGIQ---KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215 (215)
T ss_dssp CCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEESSSSSGGGTTSSCEEECC
T ss_pred hhCEEEEEEEecc---CCceEEEEECCcCcccccCCEEEEecCCCCccCcCCceeeeeC
Confidence 8999999999988 7899999999999999999999999996 99999999999985
No 19
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=4.7e-66 Score=460.92 Aligned_cols=211 Identities=52% Similarity=1.000 Sum_probs=196.6
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcC-C--CCCCCCCCchHHHHHHHHH
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCS-T--DNNGCSGGLMDKAFEYIIE 207 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~-~--~~~gc~GG~~~~a~~~~~~ 207 (346)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||+|+|++|+ . .+.+|+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999 3 3789999999999999987
Q ss_pred cCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCC-CC
Q 019112 208 NKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE-CG 285 (346)
Q Consensus 208 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~ 285 (346)
+.|+++|++|||....+.|... ......++.+|..++..++++||++|+ +|||++++++..++|++|++|||..+ |.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~Giy~~~~~~ 160 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYD-SKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCT 160 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHCCSSEECCTTCC
T ss_pred hCCcCcccccCccCCCCcccCC-CccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcccCceecCCCCC
Confidence 6799999999999999999876 345667889999998778999999998 69999999998668999999999986 87
Q ss_pred CCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceeeee
Q 019112 286 DNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYPVA 345 (346)
Q Consensus 286 ~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p~~ 345 (346)
..++|||+|||||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 161 ~~~~HaV~iVGyg~~---~g~~ywivkNSWG~~WG~~Gy~~i~~~~~n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 161 QNVNHGVLVVGYGDL---NGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 218 (218)
T ss_dssp SCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred cccCcEEEEEEEecc---CCceEEEEECCCCCccccCCEEEEecCCCCcccccCceeeeeC
Confidence 789999999999998 7899999999999999999999999996 99999999999985
No 20
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-65 Score=460.86 Aligned_cols=214 Identities=60% Similarity=1.138 Sum_probs=197.3
Q ss_pred CCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCC-CCCCCCCCchHHHHHHHHHc
Q 019112 130 DVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCST-DNNGCSGGLMDKAFEYIIEN 208 (346)
Q Consensus 130 ~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~-~~~gc~GG~~~~a~~~~~~~ 208 (346)
+||++||||++|+++||||||.||||||||++++||++++++++..++||+|+|++|+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999996 47899999999999999987
Q ss_pred CCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCC
Q 019112 209 KGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNC 288 (346)
Q Consensus 209 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~ 288 (346)
.|+++|++|||....+.|.........+++.+|..++.++++.|+++|++|||+++|++..++|++|++|||..+|+..+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Giy~~~c~~~~ 160 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTEL 160 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHHHTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCCCC
T ss_pred CCccccccCCccCCCCCCCCCCCCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCCcEECCCCCCCC
Confidence 79999999999999899986533345678999999987789999999999999999999557899999999998888888
Q ss_pred CeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 289 DHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 289 ~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
+|||+|||||++ .+|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 161 ~HaV~iVGyg~~--~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 219 (229)
T 1s4v_A 161 DHGVAIVGYGTT--IDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIK 219 (229)
T ss_dssp CEEEEEEEEEEC--TTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred CeEEEEEEeccc--cCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEe
Confidence 999999999987 23899999999999999999999999994 89999999999985
No 21
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=2.2e-65 Score=454.27 Aligned_cols=207 Identities=46% Similarity=0.908 Sum_probs=192.8
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||||+|++|+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-G 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999768899999999999999986 9
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||....+.|.........+++++|..++..++++|+++|++|||+++|++...+|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~~~~~~H 159 (212)
T 2cio_A 80 IHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDH 159 (212)
T ss_dssp BCBTTTSCCCSSCCCCCTTTTCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred cCcccccCCcCCCCCcCCCCCCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCceecCCCCCCCCE
Confidence 99999999999989998763334567899999998778999999999999999999974589999999999888888899
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 160 AVAAVGYGP-------NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EEEEEEEET-------TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred EEEEEEecC-------CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 999999996 6999999999999999999999996 89999999999986
No 22
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=2.9e-65 Score=452.03 Aligned_cols=205 Identities=51% Similarity=1.016 Sum_probs=191.7
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||||+|+||+..+.||+||++..|++|+.++.|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~G 80 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGG 80 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999976889999999999999988779
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||...++.|.. ....+++.+|..++..++++|+++|++|||+++|++...+|++|++|||+.+|+..++|
T Consensus 81 i~~e~~yPY~~~~~~C~~---~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~H 157 (208)
T 1o0e_A 81 IDTQANYPYKAVQGPCQA---ASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGPCGTKLNH 157 (208)
T ss_dssp BCBTTTSCCCSSCCCCCC---CCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCCCSCCCE
T ss_pred cCcccccCccCCCCcCCC---CCceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCceECCCCCCcCCE
Confidence 999999999999899976 23467889999998778999999999999999999975589999999999888888899
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC--CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE--GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~--~~cgi~~~~~~p~~ 345 (346)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 158 aV~iVGyg~-------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 158 GVTIVGYQA-------NYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPTK 207 (208)
T ss_dssp EEEEEEECS-------SEEEEECSBCTTSTBTTEEEEECCSTTCGGGTTSSCEEEEC
T ss_pred EEEEEEeCC-------CeEEEEcCCCCcccCCcEEEEEcCCCCCcCCCcccceeeec
Confidence 999999986 6999999999999999999999996 99999999999985
No 23
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=3.7e-65 Score=455.58 Aligned_cols=213 Identities=52% Similarity=1.001 Sum_probs=193.5
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCCCCCchHHHHHHHHHc
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMDKAFEYIIEN 208 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc~GG~~~~a~~~~~~~ 208 (346)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||+|+|++|+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999863 7899999999999999755
Q ss_pred CCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCC-CCC
Q 019112 209 KGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE-CGD 286 (346)
Q Consensus 209 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~~ 286 (346)
.|+++|++|||....+.|... ......++++|..++. ++++||++|+ +|||++++++..++|++|++|||..+ |+.
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~~Gvy~~~~c~~ 158 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYN-PKYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSS 158 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCC-GGGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCCSSEECCTTCCS
T ss_pred CCcccccccCCcccCcCccCC-CCCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCcccccccceEEcCCCCCC
Confidence 699999999999998999875 3445678999999986 8999999998 79999999998568999999999887 774
Q ss_pred -CCCeeEEEEEeeccc-cCCCccEEEEEcCCCCCcCcCceEEEEcCC-CcccccCcceeeee
Q 019112 287 -NCDHGVAVVGFGTAE-EEDGAKYWLIKNSWGETWGESGYIRILRDE-GLCGIATEASYPVA 345 (346)
Q Consensus 287 -~~~Hav~iVGyg~~~-~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~-~~cgi~~~~~~p~~ 345 (346)
.++|||+|||||++. .++|.+|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 159 ~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 159 EDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 220 (220)
T ss_dssp SCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSSSGGGTTTSCEEEEC
T ss_pred CCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCCCcCCccccceeeeC
Confidence 789999999999531 126899999999999999999999999996 89999999999985
No 24
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2.7e-65 Score=454.09 Aligned_cols=207 Identities=48% Similarity=0.959 Sum_probs=193.9
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|+++++++++.++||||+|++|+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-G 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 799999999999999999999999999999999999999999999999999999999888999999999999999988 9
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||.+..+.|.........+++.+|..++..+++.+++++.+|||++++++..++|+.|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~Giy~~~~~~~~~H 159 (213)
T 3ioq_A 80 IHLRQYYPYEGVQRQCRASQAKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGGIFAGPCGTSIDH 159 (213)
T ss_dssp EEBGGGSCCCSSCCCCCGGGCCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCchhccCcCCCCCCCCCCccCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCCeEcCCCCCccCc
Confidence 99999999999999998754455678899999998777888888888999999999976789999999999988888999
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-------~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 160 AVAAVGYGN-------DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EEEEEEEET-------TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred eEEEEecCC-------CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 999999985 6999999999999999999999996 89999999999985
No 25
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=2e-65 Score=466.85 Aligned_cols=215 Identities=60% Similarity=1.143 Sum_probs=197.4
Q ss_pred CCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCC-CCCCCCCCchHHHHHHHHH
Q 019112 129 TDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCST-DNNGCSGGLMDKAFEYIIE 207 (346)
Q Consensus 129 ~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~-~~~gc~GG~~~~a~~~~~~ 207 (346)
++||++||||++|+++||||||.||||||||+++++|+++++++++.++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999999999997 4789999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCcccccc--cccc-eeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCC
Q 019112 208 NKGLATEADYPYQQEQGTCDKQK--EKAA-AATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAEC 284 (346)
Q Consensus 208 ~~Gi~~e~~yPY~~~~~~c~~~~--~~~~-~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 284 (346)
+.|+++|++|||....+.|.... .... .+++.+|..++.+++++|+++|++|||+++|++..++|++|++|||..+|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y~sGVy~~~c 161 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTGEC 161 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHHHHHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCCC
T ss_pred cCCcCchhcCCCcCccCccCCcccccCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhccCCceECCCC
Confidence 77999999999999999998653 1345 67899999998778999999999999999999975689999999999889
Q ss_pred CCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 285 GDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 285 ~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
++..+|||+|||||++ .+|.+|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 162 ~~~~~HaV~IVGyg~~--~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~ 224 (262)
T 2fo5_A 162 GTELDHGVAVVGYGVA--EDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVK 224 (262)
T ss_dssp CCCCCEEEEEEEEEEC--TTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEEC
T ss_pred CCcCCEEEEEEEEccc--CCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEe
Confidence 8888999999999987 25889999999999999999999999995 55999999999985
No 26
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=2.4e-65 Score=456.96 Aligned_cols=211 Identities=44% Similarity=0.924 Sum_probs=195.9
Q ss_pred CCCceeccccC-CcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCCCCCchHHHHHHHHH
Q 019112 131 VPTSIDWREKG-AVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMDKAFEYIIE 207 (346)
Q Consensus 131 lP~~~Dwr~~g-~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc~GG~~~~a~~~~~~ 207 (346)
||++||||++| +|+||||||.||||||||+++++|+++++++++.++||+|+|++|+.. +.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 899999999999999999999999999999999999999999999864 789999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCC-CC
Q 019112 208 NKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE-CG 285 (346)
Q Consensus 208 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~~ 285 (346)
+.|+++|++|||....+.|... ......++.+|..++..++++|+++|+ +|||++++++. ++|++|++|||..+ |.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y~~Giy~~~~~~ 158 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQ-PDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMYRKGIYSSTSCH 158 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCC-GGGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTCCSSEECCSSCC
T ss_pred cCCcCcccccCccCCCCCCCCC-CCcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhcCCCcccCCcCC
Confidence 7799999999999999999876 345567889999998888999999997 79999999998 59999999999876 65
Q ss_pred C---CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeeeeC
Q 019112 286 D---NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVAM 346 (346)
Q Consensus 286 ~---~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~~~ 346 (346)
. .++|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||+++++||+++
T Consensus 159 ~~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 159 KTPDKVNHAVLAVGYGEE---NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIPL 219 (220)
T ss_dssp CSTTTCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEEC
T ss_pred CCCCcCCcEEEEEEEEcc---CCeeEEEEECCCCcCcccCCEEEEEcCCCccccCCCceeEeec
Confidence 3 68999999999987 7899999999999999999999999999999999999999864
No 27
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.4e-65 Score=458.79 Aligned_cols=209 Identities=50% Similarity=0.964 Sum_probs=189.6
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||||+|++|+..+.+|+||++..|++|+.++.|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITNGG 80 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999999999999999988899999999999999998779
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCC-ceEeC-CCCC--
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKR-GVLNA-ECGD-- 286 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~-Gi~~~-~~~~-- 286 (346)
+++|++|||.+.++.|...... .+++.+|..++ .++++|+++|.+|||++++++...+|++|++ |||.. +|+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~~~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~Giy~~~~~~~~~ 157 (222)
T 3u8e_A 81 IASDANYPYTGVDGTCDLNKPI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGPGIFAGSSCSDDP 157 (222)
T ss_dssp BCBTTTSCCCSSCCCCCCCSCC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCSSCBCCTTCCCCG
T ss_pred ccchhcCCCcccCCccccCCCC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCCceECCCcccCCC
Confidence 9999999999999999876322 77899999998 7899999999999999999998558999999 99998 5876
Q ss_pred -CCCeeEEEEEeeccccCC-CccEEEEEcCCCCCcCcCceEEEEcCCC----cccccCcceeeee
Q 019112 287 -NCDHGVAVVGFGTAEEED-GAKYWLIKNSWGETWGESGYIRILRDEG----LCGIATEASYPVA 345 (346)
Q Consensus 287 -~~~Hav~iVGyg~~~~~~-g~~ywivkNSWG~~WGe~Gy~~i~~~~~----~cgi~~~~~~p~~ 345 (346)
.++|||+|||||++ + |.+|||||||||++|||+|||||+|+.| .|||+++++||++
T Consensus 158 ~~~~HaV~iVGyg~~---~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~ 219 (222)
T 3u8e_A 158 ATVDHTVLIVGYGSN---GTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTK 219 (222)
T ss_dssp GGCCEEEEEEEEEES---STTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEEC
T ss_pred CcCCEEEEEEEEeec---CCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEE
Confidence 68999999999987 5 8999999999999999999999999976 9999999999985
No 28
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=6.3e-65 Score=452.39 Aligned_cols=208 Identities=44% Similarity=0.852 Sum_probs=188.7
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHc--
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIEN-- 208 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~-- 208 (346)
||++||||++|++|||||||.||||||||++++||++++++++..++||||+|+||+..+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 799999999999999999999999999999999999999999999999999999999888999999999999999874
Q ss_pred CCCCCCCCcCCCCCCC---cccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCC
Q 019112 209 KGLATEADYPYQQEQG---TCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAEC 284 (346)
Q Consensus 209 ~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~ 284 (346)
+|+++|++|||....+ .|... ......++.+|..++ .++++|+++|+ +|||++++++. +|++|++|||....
T Consensus 81 gGi~~e~~yPY~~~~~~~~~C~~~-~~~~~~~i~~~~~v~-~~~~~ik~~l~~~gPV~v~~~~~--~f~~Y~~Giy~~~~ 156 (215)
T 3i06_A 81 GAVYTEDSYPYASGEGISPPCTTS-GHTVGATITGHVELP-QDEAQIAAWLAVNGPVAVAVDAS--SWMTYTGGVMTSCV 156 (215)
T ss_dssp TEEEC-CCSCCCCTTSCCCCCCCS-SCCEEEEEEEEEECC-SCHHHHHHHHHHHCCEEEEECCT--TGGGCCSSEECSCC
T ss_pred ccccccCccCCcCCCCCCCccccC-CcccceEecceEEeC-ChHHHHHHHHHHCCCEEEEEEch--HHhcCCCCcccCCC
Confidence 4799999999997543 68765 334567889999997 47899999997 79999999984 79999999998644
Q ss_pred CCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeeee
Q 019112 285 GDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVA 345 (346)
Q Consensus 285 ~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~~ 345 (346)
...++|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||+++++||++
T Consensus 157 ~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~rg~n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 157 SEQLDHGVLLVGYNDS---AAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214 (215)
T ss_dssp CSCCCEEEEEEEEESS---SSSCEEEEECSBCTTSTBTTEEEEESSSCGGGTTSSEEEEEE
T ss_pred CCccCcEEEEEEEecc---CCcEEEEEECCCCCCcccCceEEEecCCCeecCCCceeEEec
Confidence 5678999999999987 789999999999999999999999999999999999999986
No 29
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=4.8e-65 Score=452.55 Aligned_cols=207 Identities=50% Similarity=1.029 Sum_probs=193.4
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-G 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999767899999999999999988 9
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCCCCCe
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGDNCDH 290 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~H 290 (346)
+++|++|||....+.|.........+++++|..++..++++|+++|++|||++++++..++|++|++|||..+|+..++|
T Consensus 80 i~~e~~yPY~~~~~~C~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~Giy~~~~~~~~~H 159 (214)
T 2bdz_A 80 VHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGIYEGPCGTNTDH 159 (214)
T ss_dssp EEBTTTSCCCSSCCCCCTTTCCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSSEECCSCCSCCCE
T ss_pred CCccccCCCCCCCCCCCCCCCCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCceecCCCCCCCCe
Confidence 99999999999989998763334578899999998788999999998999999999985689999999999999888999
Q ss_pred eEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 291 GVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 291 av~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
||+|||||+ +|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 160 aV~iVGyg~-------~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (214)
T 2bdz_A 160 AVTAVGYGK-------TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIK 211 (214)
T ss_dssp EEEEEEECS-------SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEEC
T ss_pred EEEEEEcCC-------CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEe
Confidence 999999986 6999999999999999999999995 89999999999985
No 30
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=5.9e-65 Score=452.26 Aligned_cols=208 Identities=41% Similarity=0.794 Sum_probs=191.4
Q ss_pred CCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 019112 131 VPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKG 210 (346)
Q Consensus 131 lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~G 210 (346)
||++||||++|+++||||||.||||||||+++++|++++++++..++||||+|+||...+.||+||++..|++|+.++.|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~~G 80 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG 80 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999999999999999999999999999977889999999999999988779
Q ss_pred CCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCC---CCC
Q 019112 211 LATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE---CGD 286 (346)
Q Consensus 211 i~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~---~~~ 286 (346)
+++|++|||.+....|... ......++.++..++ .++++||++|+ +|||++++++. .|++|++|||..+ |+.
T Consensus 81 i~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~i~-~~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~Giy~~~~~~c~~ 156 (214)
T 1m6d_A 81 LETEDDYSYQGHMQSCQFS-AEKAKVYIQDSVELS-QNEQKLAAWLAKRGPISVAINAF--GMQFYRHGISRPLRPLCSP 156 (214)
T ss_dssp BCBTTTSCCCSSCCCCCCC-GGGCCBCCSEEEECC-SCHHHHHHHHHHHCCEEEEECTH--HHHHCCSSEECCCGGGSCT
T ss_pred cccccCcCcCCCCCcCCCC-cccceEEecCEEEeC-hHHHHHHHHHHhCCCEEEEEEec--hhhhcCCceecCCCCcCCC
Confidence 9999999999988999865 334456788998887 48899999997 79999999986 5999999999863 664
Q ss_pred -CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeeee
Q 019112 287 -NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVA 345 (346)
Q Consensus 287 -~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~~ 345 (346)
.++|||+|||||++ +|.+|||||||||++|||+|||||+|+.|.|||+++++||++
T Consensus 157 ~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~r~~n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 157 WLIDHAVLLVGYGQR---SDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVV 213 (214)
T ss_dssp TCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEESSSCGGGTTTTCEEEEC
T ss_pred CcCCEEEEEEEEeec---CCcEEEEEEeCCCCCcccCcEEEEEcCCCccccCceeEEEEe
Confidence 58999999999997 789999999999999999999999999999999999999986
No 31
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.1e-64 Score=459.10 Aligned_cols=210 Identities=43% Similarity=0.904 Sum_probs=194.2
Q ss_pred CCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcC
Q 019112 130 DVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENK 209 (346)
Q Consensus 130 ~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~ 209 (346)
+||++||||++|+++||||||.||||||||+++++|++++++++..++||+|+|+||+..+.||+||++..|++|+.++.
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 80 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHG 80 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHTT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 48999999999999999999999999999999999999999999999999999999997678999999999999999867
Q ss_pred CCCCCCCcCCCCCCCcccccccccceeeecee---EeCCCCcHHHHHHHHhc----CCeEEEEEeccccccccCCceEeC
Q 019112 210 GLATEADYPYQQEQGTCDKQKEKAAAATIGKY---EDLPKGDEHALLQAVTK----QPVSVCVEASGQAFRFYKRGVLNA 282 (346)
Q Consensus 210 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y---~~v~~~~~~~i~~~l~~----gPV~v~~~~~~~~f~~y~~Gi~~~ 282 (346)
|+++|++|||...++.|... .....+++++| ..++..++++|+++|++ |||+++|++ ++|++|++|||..
T Consensus 81 Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~~f~~Y~~Giy~~ 157 (246)
T 2b1m_A 81 GIASEADYPYKARDGKCKAN-EIQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--KDFHFYSGGIYDG 157 (246)
T ss_dssp CBCBTTTSCCCSSCCCCCGG-GCCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--TTGGGCCSSEECC
T ss_pred CcCccccccccCCCCcCcCC-CCCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--chhhcccceeecC
Confidence 99999999999999999876 33456788999 88887789999999986 999999999 5899999999998
Q ss_pred -CCCCC--CCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC----CcccccCcceeeee
Q 019112 283 -ECGDN--CDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE----GLCGIATEASYPVA 345 (346)
Q Consensus 283 -~~~~~--~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~----~~cgi~~~~~~p~~ 345 (346)
.|+.. ++|||+|||||++ +|.+|||||||||++|||+|||||+|+. |.|||++.++||++
T Consensus 158 ~~c~~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~ 224 (246)
T 2b1m_A 158 GNCSSPYGINHFVLIVGYGSE---DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPII 224 (246)
T ss_dssp TTCCSSCCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEEC
T ss_pred CCCCCCCcCceEEEEEEEecc---CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEe
Confidence 48765 8999999999998 7899999999999999999999999997 99999999999985
No 32
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=3.3e-65 Score=457.33 Aligned_cols=215 Identities=43% Similarity=0.939 Sum_probs=198.4
Q ss_pred CCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCCCCCchHHHHHHHH
Q 019112 129 TDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMDKAFEYII 206 (346)
Q Consensus 129 ~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc~GG~~~~a~~~~~ 206 (346)
.+||++||||++|+++||||||.||||||||++++||+++++++++.++||+|+|++|... +.+|+||.+..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 3699999999999999999999999999999999999999999999999999999999975 78999999999999999
Q ss_pred HcCCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCC
Q 019112 207 ENKGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGD 286 (346)
Q Consensus 207 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 286 (346)
+++|+++|++|||....+.|... ......++.+|..++..++++|+++|.+|||++++++...+|++|++|||++.|+.
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~-~~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y~~Giy~~~~~~ 163 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQ-SCEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFYHEGVFDASCGT 163 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGG-GSCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTEEEEEECCCCCC
T ss_pred HhCCccccccCCCcCCCCCCCcC-CCCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcCccceECCCCCC
Confidence 85699999999999999999866 34455678999999878899999999999999999998568999999999977888
Q ss_pred CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCC---CcccccCcceeeee
Q 019112 287 NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDE---GLCGIATEASYPVA 345 (346)
Q Consensus 287 ~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~---~~cgi~~~~~~p~~ 345 (346)
.++|||+|||||++. .+|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 164 ~~~Hav~iVGyg~~~-~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 164 DLDHGVLLVGYGTDK-ESKKDFWIMKNSWGTGWGRDGYMYMAMHKGEEGQCGLLLDASFPVM 224 (224)
T ss_dssp CCCEEEEEEEEEEET-TTTEEEEEEECSBCTTSTBTTEEEEESCSCTTCGGGTTSSCEEEEC
T ss_pred ccCeEEEEEEEeccc-CCCCCEEEEECCcCcchhhCCEEEEEcCCCCCCcCcccCceeeeeC
Confidence 899999999999873 26789999999999999999999999997 99999999999985
No 33
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=7.9e-65 Score=459.06 Aligned_cols=214 Identities=43% Similarity=0.825 Sum_probs=195.3
Q ss_pred CCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 019112 128 VTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIE 207 (346)
Q Consensus 128 ~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~ 207 (346)
..+||++||||+.|+++||||||.||||||||+++++|++++++++..++||||+|++|+..+.||+||++..|++|+.+
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Confidence 34799999999999999999999999999999999999999999999999999999999977889999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCc-ccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCC
Q 019112 208 NKGLATEADYPYQQEQGT-CDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGD 286 (346)
Q Consensus 208 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 286 (346)
+.|+++|++|||....+. |... .....+++.+|..++..++++||++| |||+++|++. ++|++|++|||..+|+.
T Consensus 95 ~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 170 (241)
T 2oul_A 95 LGGICPDGDYPYVSDAPNLCNID-RCTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAFYKEGIFDGECGD 170 (241)
T ss_dssp TTSBCBTTSSCCCTTSCCCCCTT-SSSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHTCCSSBCCSCBCS
T ss_pred hCCcCccccCCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhhcCCcEEcCcCCC
Confidence 669999999999998888 9865 33456889999999877899999999 9999999997 78999999999988876
Q ss_pred CCCeeEEEEEeecccc-------CCCccEEEEEcCCCCCcCcCceEEEEcCCCc----ccccCcceeeee
Q 019112 287 NCDHGVAVVGFGTAEE-------EDGAKYWLIKNSWGETWGESGYIRILRDEGL----CGIATEASYPVA 345 (346)
Q Consensus 287 ~~~Hav~iVGyg~~~~-------~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~----cgi~~~~~~p~~ 345 (346)
.++|||+|||||++.. .+|.+|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 171 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 240 (241)
T 2oul_A 171 QLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIPLI 240 (241)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEEEC
T ss_pred CCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEEee
Confidence 6999999999998720 0278999999999999999999999999776 999999999985
No 34
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=9.1e-65 Score=459.23 Aligned_cols=214 Identities=41% Similarity=0.776 Sum_probs=195.4
Q ss_pred CCCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHH
Q 019112 128 VTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIE 207 (346)
Q Consensus 128 ~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~ 207 (346)
..+||++||||+.|+++||||||.||||||||++++||++++++++..++||+|+|++|+..+.||+||++..|++|+.+
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999977889999999999999998
Q ss_pred cCCCCCCCCcCCCCCCCc-ccccccccceeeeceeEeCCCCcHHHHHHHHhcCCeEEEEEeccccccccCCceEeCCCCC
Q 019112 208 NKGLATEADYPYQQEQGT-CDKQKEKAAAATIGKYEDLPKGDEHALLQAVTKQPVSVCVEASGQAFRFYKRGVLNAECGD 286 (346)
Q Consensus 208 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~ 286 (346)
+.|+++|++|||....+. |... .....+++.+|..++..++++||++| |||+++|++. ++|+.|++|||...|+.
T Consensus 97 ~~Gi~~e~~yPY~~~~~~~C~~~-~~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~Y~~Giy~~~c~~ 172 (243)
T 3bwk_A 97 LGGLCSQDDYPYVSNLPETCNLK-RCNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAFYRGGFYDGECGA 172 (243)
T ss_dssp TTSBCBTTTSCCCTTSCCCCCGG-GCSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHTCCSSSCCCCCCS
T ss_pred hCCcccccccCCcCCCCCcCCCC-CCccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHhcCCceecCCCCC
Confidence 669999999999998888 9865 33456889999999877899999999 9999999997 78999999999988876
Q ss_pred CCCeeEEEEEeecccc-------CCCccEEEEEcCCCCCcCcCceEEEEcCCCc----ccccCcceeeee
Q 019112 287 NCDHGVAVVGFGTAEE-------EDGAKYWLIKNSWGETWGESGYIRILRDEGL----CGIATEASYPVA 345 (346)
Q Consensus 287 ~~~Hav~iVGyg~~~~-------~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~----cgi~~~~~~p~~ 345 (346)
.++|||+|||||++.. ..|.+|||||||||++|||+|||||+|+.|. |||+++++||++
T Consensus 173 ~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~~~ 242 (243)
T 3bwk_A 173 APNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVPLL 242 (243)
T ss_dssp SCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEEEC
T ss_pred cCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEEec
Confidence 6999999999998720 0278999999999999999999999999776 999999999985
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.5e-64 Score=452.29 Aligned_cols=210 Identities=31% Similarity=0.597 Sum_probs=193.6
Q ss_pred CCCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHc
Q 019112 129 TDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIEN 208 (346)
Q Consensus 129 ~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~ 208 (346)
++||++||||++|+++||||||.||||||||+++++|+++.+++++.++||||+|++|.. +.||+||++..|++|+.++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS-QHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-SSTTBCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC-CCCCCCCCHHHHHHHHHHc
Confidence 479999999999999999999999999999999999999999999999999999999998 8999999999999999986
Q ss_pred CCCCCCCCcCCCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh--cCCeEEEEEec-cccccccCCceEeCC-C
Q 019112 209 KGLATEADYPYQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT--KQPVSVCVEAS-GQAFRFYKRGVLNAE-C 284 (346)
Q Consensus 209 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~--~gPV~v~~~~~-~~~f~~y~~Gi~~~~-~ 284 (346)
|+++|++|||.+..+.|.. .....+++.+|..++..++++||++|+ +|||++++++. .++|++|++|++..+ +
T Consensus 87 -Gi~~e~~yPY~~~~~~C~~--~~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f~~Y~~gi~~~~~~ 163 (222)
T 3f5v_A 87 -GVVQESYYRYVAREQSCRR--PNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDN 163 (222)
T ss_dssp -CEEBGGGSCCCSSCCCCCC--CSSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHHHTCCSSSCBCCCC
T ss_pred -CCCchhhCCCcccCCCccC--CcCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhhhccCCCceecCCC
Confidence 9999999999999899983 455678899999998788999999997 49999999994 368999999987543 3
Q ss_pred -CCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeeee
Q 019112 285 -GDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPVA 345 (346)
Q Consensus 285 -~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~~ 345 (346)
...++|||+|||||++ +|++|||||||||++|||+|||||+|+.|.|||+++++||++
T Consensus 164 ~~~~~~HaV~iVGyg~~---~g~~ywivkNSWG~~WGe~Gy~~i~r~~n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 164 GYQPNYHAVNIVGYSNA---QGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL 222 (222)
T ss_dssp SSSCEEEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECSSCGGGTTTSCEEEEC
T ss_pred CCCccCcEEEEEEEecc---CCCEEEEEEcCCCCCcccCCEEEEEcCCCeecCCCceeEEeC
Confidence 4678999999999987 789999999999999999999999999999999999999985
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=5.7e-60 Score=433.47 Aligned_cols=210 Identities=30% Similarity=0.645 Sum_probs=179.4
Q ss_pred CCCCCceecccc----CCcccccCCCCCccHHHHHHHHHHHHHHHHhcC--CCcccCHHHHhhcCC--CCCCCCCCchHH
Q 019112 129 TDVPTSIDWREK----GAVTHIKNQGHCGSCWAFSAVAAVEGITQITGG--KLIELSEQQLVDCST--DNNGCSGGLMDK 200 (346)
Q Consensus 129 ~~lP~~~Dwr~~----g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~~c~~--~~~gc~GG~~~~ 200 (346)
.+||++||||+. +.|+||||||.||||||||++++||++++++++ ..++||||+|+||+. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 369999999987 889999999999999999999999999999875 478999999999986 378999999999
Q ss_pred HHHHHHHcCCCCC-------CCCcCCC---------CCCCccccc---------ccc--------cceeeeceeEeCCCC
Q 019112 201 AFEYIIENKGLAT-------EADYPYQ---------QEQGTCDKQ---------KEK--------AAAATIGKYEDLPKG 247 (346)
Q Consensus 201 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~c~~~---------~~~--------~~~~~i~~y~~v~~~ 247 (346)
|++|+.++ |+++ |++|||. +..+.|... +.. ...+.+ .+..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~-~~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGY-NSYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBS-CCEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeee-eeEEeC-C
Confidence 99999885 9999 9999998 334556321 000 011222 334565 5
Q ss_pred cHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCC-CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceE
Q 019112 248 DEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGD-NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYI 325 (346)
Q Consensus 248 ~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~ 325 (346)
++++||++|+ +|||+++|++. ++|+.|++|||.++|+. .++|||+|||||++ +|.+|||||||||++|||+|||
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~---~g~~yWivkNSWG~~WGe~Gy~ 237 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE---NGTPYWLVANSWNTDWGDNGFF 237 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc---CCceEEEEEcCCCCccCCCCEE
Confidence 8999999997 79999999997 68999999999987664 45999999999997 8899999999999999999999
Q ss_pred EEEcCCCcccccCcceeeee
Q 019112 326 RILRDEGLCGIATEASYPVA 345 (346)
Q Consensus 326 ~i~~~~~~cgi~~~~~~p~~ 345 (346)
||+|+.|.|||++.+++++.
T Consensus 238 ~i~rg~n~cgI~~~~~~~~p 257 (266)
T 3cbj_A 238 KILRGQDHCGIESEVVAGIP 257 (266)
T ss_dssp EEECSSCGGGTTTSCEECCB
T ss_pred EEEcCCCcccccCceEEEEe
Confidence 99999999999999998764
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1e-59 Score=429.06 Aligned_cols=211 Identities=33% Similarity=0.684 Sum_probs=178.3
Q ss_pred CCCCceecccc----CCcccccCCCCCccHHHHHHHHHHHHHHHHhcC--CCcccCHHHHhhcCCC-CCCCCCCchHHHH
Q 019112 130 DVPTSIDWREK----GAVTHIKNQGHCGSCWAFSAVAAVEGITQITGG--KLIELSEQQLVDCSTD-NNGCSGGLMDKAF 202 (346)
Q Consensus 130 ~lP~~~Dwr~~----g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~--~~~~lS~q~l~~c~~~-~~gc~GG~~~~a~ 202 (346)
+||++||||++ +.|+||||||.||||||||++++||++++++++ ..++||||+|+||+.. +.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 58999999998 689999999999999999999999999999876 6789999999999764 6899999999999
Q ss_pred HHHHHcCCCCCCCCc-------CCC---------CCCCccccc----------cccc-------ceeeeceeEeCCCCcH
Q 019112 203 EYIIENKGLATEADY-------PYQ---------QEQGTCDKQ----------KEKA-------AAATIGKYEDLPKGDE 249 (346)
Q Consensus 203 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~----------~~~~-------~~~~i~~y~~v~~~~~ 249 (346)
+|++++ |+++|++| ||. +..+.|... +... ..........++ .++
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVK-NDE 159 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEEECC-SCH
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeEecC-CcH
Confidence 999987 99999888 997 334455321 0000 000111223454 478
Q ss_pred HHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCC-CCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEE
Q 019112 250 HALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGD-NCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRI 327 (346)
Q Consensus 250 ~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~-~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i 327 (346)
++|+++|+ +|||++++++. ++|++|++|||..++.. .++|||+|||||++ +|.+|||||||||++|||+|||||
T Consensus 160 ~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~---~g~~ywivkNSWG~~WG~~Gy~~i 235 (254)
T 3qsd_A 160 KAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE---NKAPYWLIANSWNEDWGENGYFRI 235 (254)
T ss_dssp HHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEE
T ss_pred HHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec---CCeeEEEEEeCCCCCcccCCeEEE
Confidence 99999997 79999999997 78999999999988554 46999999999987 789999999999999999999999
Q ss_pred EcCCCcccccCcceeeeeC
Q 019112 328 LRDEGLCGIATEASYPVAM 346 (346)
Q Consensus 328 ~~~~~~cgi~~~~~~p~~~ 346 (346)
+|+.|.|||+++++..+.+
T Consensus 236 ~rg~n~CgI~~~~~~~~p~ 254 (254)
T 3qsd_A 236 VRGRDECSIESEVTAGRIN 254 (254)
T ss_dssp ECSSCGGGTTSSEEEEECC
T ss_pred EcCCCeecCCCceEeeccC
Confidence 9999999999999887653
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=8.4e-60 Score=434.03 Aligned_cols=211 Identities=29% Similarity=0.613 Sum_probs=186.4
Q ss_pred CCCCCCCceecccc---CCcccccCCC---CCccHHHHHHHHHHHHHHHHhcC-C--CcccCHHHHhhcCCCCCCCCCCc
Q 019112 127 NVTDVPTSIDWREK---GAVTHIKNQG---HCGSCWAFSAVAAVEGITQITGG-K--LIELSEQQLVDCSTDNNGCSGGL 197 (346)
Q Consensus 127 ~~~~lP~~~Dwr~~---g~v~pVkdQg---~cGsCwAfA~~~~le~~~~~~~~-~--~~~lS~q~l~~c~~~~~gc~GG~ 197 (346)
...+||++||||+. ++++|||||| .||||||||++++||++++++++ . .++||+|+|+||+.. .||+||+
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~~-~gC~GG~ 110 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGNA-GSCEGGN 110 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSSS-EETBEEC
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcCC-CCCCCCC
Confidence 34579999999998 6799999999 99999999999999999999875 3 479999999999874 8999999
Q ss_pred hHHHHHHHHHcCCCCCCCCcCCCCCCCcccc-cc-------------cccceeeeceeEeCCCCcHHHHHHHHh-cCCeE
Q 019112 198 MDKAFEYIIENKGLATEADYPYQQEQGTCDK-QK-------------EKAAAATIGKYEDLPKGDEHALLQAVT-KQPVS 262 (346)
Q Consensus 198 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~-~~-------------~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~ 262 (346)
+..|++|+.++ |+++|++|||...+..|.. .. .....+++..|..++ ++++||++|. +|||+
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEE
Confidence 99999999875 9999999999998888873 10 011345677888876 5788999987 89999
Q ss_pred EEEEeccccccccCCceEeCC-CCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEEcCCC--------c
Q 019112 263 VCVEASGQAFRFYKRGVLNAE-CGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRDEG--------L 333 (346)
Q Consensus 263 v~~~~~~~~f~~y~~Gi~~~~-~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~~~--------~ 333 (346)
++|++. ++|+.|++|||..+ +...++|||+|||||++ +|.+|||||||||++|||+|||||+|+.| .
T Consensus 188 v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~---~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~ 263 (277)
T 1deu_A 188 CGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS---DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYN 263 (277)
T ss_dssp EEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE---TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTB
T ss_pred EEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc---CCccEEEEEeCCCCccCCCcEEEEEcCCCccccccccc
Confidence 999998 68999999999987 45678999999999998 78999999999999999999999999988 9
Q ss_pred ccccCcceeeee
Q 019112 334 CGIATEASYPVA 345 (346)
Q Consensus 334 cgi~~~~~~p~~ 345 (346)
|||++++.|++.
T Consensus 264 cgIe~~~~~~~p 275 (277)
T 1deu_A 264 LAIEEHCTFGDP 275 (277)
T ss_dssp TTTTSCEEEEEE
T ss_pred ceeccccEeecc
Confidence 999999999874
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=8.7e-54 Score=392.55 Aligned_cols=210 Identities=23% Similarity=0.528 Sum_probs=165.4
Q ss_pred Cceecccc-CCcc--cccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCCC--CCCCCCCchH-HHHHHHH
Q 019112 133 TSIDWREK-GAVT--HIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCSTD--NNGCSGGLMD-KAFEYII 206 (346)
Q Consensus 133 ~~~Dwr~~-g~v~--pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~~--~~gc~GG~~~-~a~~~~~ 206 (346)
...|||+. |+++ ||||||.||||||||++++||++++++++..+.||||+|+||+.. +.||+||... .++.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 46899999 6877 999999999999999999999999999989999999999999864 7899999644 5567777
Q ss_pred HcCCCCCCCCcCCCCC--CCccccccc----------------ccceeeeceeEeCCCC----c----HHHHHHHHh-cC
Q 019112 207 ENKGLATEADYPYQQE--QGTCDKQKE----------------KAAAATIGKYEDLPKG----D----EHALLQAVT-KQ 259 (346)
Q Consensus 207 ~~~Gi~~e~~yPY~~~--~~~c~~~~~----------------~~~~~~i~~y~~v~~~----~----~~~i~~~l~-~g 259 (346)
+++|+++|++|||... .+.|..... .....++.+|..++.. + +++||++|+ +|
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~G 168 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKG 168 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHS
T ss_pred HcCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcC
Confidence 7745999999999863 467864321 1123467777776531 3 378999997 79
Q ss_pred CeEEEEEeccccccccC-CceE-eCCCCC-CCCeeEEEEEeeccccCCC--ccEEEEEcCCCCCcCcCceEEEEc-CCCc
Q 019112 260 PVSVCVEASGQAFRFYK-RGVL-NAECGD-NCDHGVAVVGFGTAEEEDG--AKYWLIKNSWGETWGESGYIRILR-DEGL 333 (346)
Q Consensus 260 PV~v~~~~~~~~f~~y~-~Gi~-~~~~~~-~~~Hav~iVGyg~~~~~~g--~~ywivkNSWG~~WGe~Gy~~i~~-~~~~ 333 (346)
||+++|++. +|..|+ +|++ ...|+. .++|||+|||||++..++| .+|||||||||++|||+|||||+| +.|.
T Consensus 169 PV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~n~ 246 (265)
T 2wbf_X 169 SVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGPTH 246 (265)
T ss_dssp CEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCCTT
T ss_pred CEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCCCc
Confidence 999999985 576664 4432 334764 6899999999998522245 689999999999999999999987 5899
Q ss_pred ccccC---cceeee
Q 019112 334 CGIAT---EASYPV 344 (346)
Q Consensus 334 cgi~~---~~~~p~ 344 (346)
|||+. .+.||+
T Consensus 247 Cgi~~~~~~~~~~~ 260 (265)
T 2wbf_X 247 CHFNFIHSVVIFNV 260 (265)
T ss_dssp CSSCSCCEEEEECE
T ss_pred cCcceeEEEEeccc
Confidence 99665 455554
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=6.7e-52 Score=384.47 Aligned_cols=231 Identities=19% Similarity=0.273 Sum_probs=177.5
Q ss_pred eEEEcccCCCCCHHHHhhhhcCCCCCCCCCCcCCCCCCccccCCCCCCCCceeccccCCcccccCCCCCccHHHHHHHHH
Q 019112 84 YKLGTNEFSDLTNEEFRASYTGYNRPVPSVSRQSSRPSTFKYQNVTDVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAA 163 (346)
Q Consensus 84 ~~~g~N~fsd~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~ 163 (346)
..-..|++.++..|.++.. +|..|+.++.... ...... ....+||++||||+.+ ||||||.||||||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd~-~~~~~~--~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~a 86 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRKKSG-YGYIPDIADIRDF-SYTPEK--SVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAAA 86 (291)
T ss_dssp ---------CCCCCCCCTT-CCEECCCCCTTCC-BCCCCH--HHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHHH
T ss_pred cccchhhHhHhhhcccccc-CCCCCCCCccccc-ccCCCc--cccccCCcceecccCC---CcccCCCCccHHHHHHHHH
Confidence 3446789999999998865 6777765532111 001100 1124799999999984 9999999999999999999
Q ss_pred HHHHHHHhcCCCcccCHHHHh--hcCC---C-CCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCC---Cccccc-----
Q 019112 164 VEGITQITGGKLIELSEQQLV--DCST---D-NNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQ---GTCDKQ----- 229 (346)
Q Consensus 164 le~~~~~~~~~~~~lS~q~l~--~c~~---~-~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~----- 229 (346)
+|+++++ ++..+.||+|+|+ +|.. . ..+|.||++..|++|+.++ |+++|++|||.+.+ +.|...
T Consensus 87 lE~~~~~-~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~~ 164 (291)
T 3ois_A 87 IQFERIH-DKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAPA 164 (291)
T ss_dssp HHHHHHH-TTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCGG
T ss_pred HHHHHHH-hCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCccccccccccccccc
Confidence 9998764 5677899999998 6763 2 3468899999999999986 99999999999873 345431
Q ss_pred -------c-cccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCC--ceEeCC-CCC--CCCeeEEEE
Q 019112 230 -------K-EKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKR--GVLNAE-CGD--NCDHGVAVV 295 (346)
Q Consensus 230 -------~-~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~--Gi~~~~-~~~--~~~Hav~iV 295 (346)
+ .....+++.+|..|+. ++++|+++|+ +|||++++++. ++|+.|++ |||..+ |.. .++|||+||
T Consensus 165 ~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~iV 242 (291)
T 3ois_A 165 SKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLCV 242 (291)
T ss_dssp GSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEEE
T ss_pred cCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEEE
Confidence 0 1224578899999985 8999999998 69999999998 79999998 999887 432 359999999
Q ss_pred EeeccccCCCccEEEEEcCCCCCcCcCceEEEEcC
Q 019112 296 GFGTAEEEDGAKYWLIKNSWGETWGESGYIRILRD 330 (346)
Q Consensus 296 Gyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 330 (346)
|||+ |++|||||||||++|||+|||||+|+
T Consensus 243 Gy~~-----~~~ywivkNSWG~~WG~~Gy~~i~~~ 272 (291)
T 3ois_A 243 GYDD-----EIRHFRIRNSWGNNVGEDGYFWMPYE 272 (291)
T ss_dssp EEET-----TTTEEEEECSBCTTSTBTTEEEEEHH
T ss_pred EEeC-----CCCEEEEEeCCCCCCCCCcEEEEEHH
Confidence 9983 57899999999999999999999998
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=3.3e-41 Score=324.74 Aligned_cols=196 Identities=18% Similarity=0.293 Sum_probs=152.2
Q ss_pred CCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHh-cCCCcccCH----------------HHHhhcCCC---
Q 019112 130 DVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQIT-GGKLIELSE----------------QQLVDCSTD--- 189 (346)
Q Consensus 130 ~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~~c~~~--- 189 (346)
..|..|+++....+|||+|||+||+|||||+++++|+.+.++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 357788888888899999999999999999999999999998 578899999 999999743
Q ss_pred -----------CCCCCCCchHHHHHHHHHcCCCCCCCCcCCCCCC---------------------------C------c
Q 019112 190 -----------NNGCSGGLMDKAFEYIIENKGLATEADYPYQQEQ---------------------------G------T 225 (346)
Q Consensus 190 -----------~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 225 (346)
+.+|+||.+..++.++.+. |++++++|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-CccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 6899999999999999874 99999999998631 1 1
Q ss_pred ----------------c----------cc-------------ccc----cccee--eeceeEe-----------------
Q 019112 226 ----------------C----------DK-------------QKE----KAAAA--TIGKYED----------------- 243 (346)
Q Consensus 226 ----------------c----------~~-------------~~~----~~~~~--~i~~y~~----------------- 243 (346)
| .. .+. ..... .+.+|..
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 4 11 000 00011 3344443
Q ss_pred ----------------CCCCcH-HHHHHHHh-cCCeEEEEEeccccccccCCceEeCC-C--------------------
Q 019112 244 ----------------LPKGDE-HALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAE-C-------------------- 284 (346)
Q Consensus 244 ----------------v~~~~~-~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~-~-------------------- 284 (346)
++..+. +.++.+|. .|||++++++.. +.++++|||+.+ |
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 332111 34456776 699999999984 444599999876 3
Q ss_pred --CCCCCeeEEEEEee--ccccCCCc-cEEEEEcCCCCCcCcCceEEEEcC
Q 019112 285 --GDNCDHGVAVVGFG--TAEEEDGA-KYWLIKNSWGETWGESGYIRILRD 330 (346)
Q Consensus 285 --~~~~~Hav~iVGyg--~~~~~~g~-~ywivkNSWG~~WGe~Gy~~i~~~ 330 (346)
.+..+|||+||||| .+ .+|+ +|||||||||++||++|||+|+|+
T Consensus 364 ~~~s~~~HAmlivGyg~~~d--~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDD--QDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTT--SCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccc--cCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 24579999999999 54 3677 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.9e-40 Score=319.72 Aligned_cols=206 Identities=18% Similarity=0.232 Sum_probs=143.7
Q ss_pred CCCCceeccccCCcccccCCCCCccHHHHHHHHHHHHHHHHh-cCCCcccCH----------------HHHhhcCC----
Q 019112 130 DVPTSIDWREKGAVTHIKNQGHCGSCWAFSAVAAVEGITQIT-GGKLIELSE----------------QQLVDCST---- 188 (346)
Q Consensus 130 ~lP~~~Dwr~~g~v~pVkdQg~cGsCwAfA~~~~le~~~~~~-~~~~~~lS~----------------q~l~~c~~---- 188 (346)
..|..|+++..+.+|||||||+||+|||||+++++|+.+.++ +++.++||+ |+|++|+.
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 356788888888899999999999999999999999999998 788899999 78899975
Q ss_pred --------CCCCCCCCchHHHHHHHHHcCCCCCCCCcCC-CCC---------------------------------C---
Q 019112 189 --------DNNGCSGGLMDKAFEYIIENKGLATEADYPY-QQE---------------------------------Q--- 223 (346)
Q Consensus 189 --------~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~---------------------------------~--- 223 (346)
.+.+|+||.+..++.++.+. |+++|++||| +.. .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 37899999999999999875 9999999999 310 0
Q ss_pred ------------------Ccccc----cc--------------c-cc---------------------------ceeee-
Q 019112 224 ------------------GTCDK----QK--------------E-KA---------------------------AAATI- 238 (346)
Q Consensus 224 ------------------~~c~~----~~--------------~-~~---------------------------~~~~i- 238 (346)
+.|+. .. . .+ ..+.+
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 01111 00 0 00 00000
Q ss_pred ------c----eeEeCCCCc-HHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCC---------------------C
Q 019112 239 ------G----KYEDLPKGD-EHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAEC---------------------G 285 (346)
Q Consensus 239 ------~----~y~~v~~~~-~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~---------------------~ 285 (346)
. .|.+++... .+.++.+|. .|||++++++. .+.+|++|||+..| .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 0 133443211 144456676 69999999998 37778999998764 2
Q ss_pred CCCCeeEEEEEeeccccCCCc--cEEEEEcCCCCCcCcCceEEEEcCCCcccccCcceeee
Q 019112 286 DNCDHGVAVVGFGTAEEEDGA--KYWLIKNSWGETWGESGYIRILRDEGLCGIATEASYPV 344 (346)
Q Consensus 286 ~~~~Hav~iVGyg~~~~~~g~--~ywivkNSWG~~WGe~Gy~~i~~~~~~cgi~~~~~~p~ 344 (346)
+..+|||+|||||.+ .+|+ +|||||||||++||++||++|+|+ .++..+++++
T Consensus 369 s~~~HAmlivGyg~d--~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~----wf~ey~~~iv 423 (457)
T 2e01_A 369 SLMTAAMLITGCHVD--ETSKLPLRYRVENSWGKDSGKDGLYVMTQK----YFEEYCFQIV 423 (457)
T ss_dssp CCCCEEEEEEEEEEC--TTTCCEEEEEEECSSCTTSTBTTEEEEEHH----HHHHHEEEEE
T ss_pred CCCCeEEEEEEEEec--cCCCccCEEEEEeCccCCcCCCceEEeehh----hHhhccEEEE
Confidence 457999999999975 3677 899999999999999999999986 4444444443
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=5e-35 Score=276.26 Aligned_cols=184 Identities=22% Similarity=0.346 Sum_probs=134.7
Q ss_pred CcccccCCCCCccHHHHHHHHHHHHHHHHhcCCCcccCHHHHhhcCC------------CCCCCCCCchHHHHHHHHHcC
Q 019112 142 AVTHIKNQGHCGSCWAFSAVAAVEGITQITGGKLIELSEQQLVDCST------------DNNGCSGGLMDKAFEYIIENK 209 (346)
Q Consensus 142 ~v~pVkdQg~cGsCwAfA~~~~le~~~~~~~~~~~~lS~q~l~~c~~------------~~~gc~GG~~~~a~~~~~~~~ 209 (346)
.++||||||+||+|||||+++++|+.+.+++++.+.||+|+|++|+. .+.+|+||.+..|++|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 38999999999999999999999999999999999999999999974 15799999999999999875
Q ss_pred CCCCCCCcC------CCCCC-----------------C-ccc-------cc----------------cc-----------
Q 019112 210 GLATEADYP------YQQEQ-----------------G-TCD-------KQ----------------KE----------- 231 (346)
Q Consensus 210 Gi~~e~~yP------Y~~~~-----------------~-~c~-------~~----------------~~----------- 231 (346)
|+++|++|| +.... . ... .. ++
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 22100 0 000 00 00
Q ss_pred -----ccceeeeceeEeCCC-------------------------CcHHHHHHH----Hh-cCCeEEEEEeccccccccC
Q 019112 232 -----KAAAATIGKYEDLPK-------------------------GDEHALLQA----VT-KQPVSVCVEASGQAFRFYK 276 (346)
Q Consensus 232 -----~~~~~~i~~y~~v~~-------------------------~~~~~i~~~----l~-~gPV~v~~~~~~~~f~~y~ 276 (346)
.........|..+.. -..+.|+++ |. .-||..+-+++...|. +
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~--~ 257 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLPLDEFMEVFDNAINTGYTIAWGSDVSESGFT--R 257 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECCHHHHHHHHHHHHHTTCCEEEEEECCSTTBC--T
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcCHHHHHHHHHHHHHcCCcEEEEcccCccccC--C
Confidence 000001112221100 014555544 44 5799999999844555 8
Q ss_pred CceEeCC--C---------------------------------------------CCCCCeeEEEEEeeccccCCCccEE
Q 019112 277 RGVLNAE--C---------------------------------------------GDNCDHGVAVVGFGTAEEEDGAKYW 309 (346)
Q Consensus 277 ~Gi~~~~--~---------------------------------------------~~~~~Hav~iVGyg~~~~~~g~~yw 309 (346)
.||...+ - .+..+|||+|||||.+ .+|++||
T Consensus 258 ~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d--~~g~~yw 335 (383)
T 3pw3_A 258 DGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKD--QEGNEYY 335 (383)
T ss_dssp TSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEEC--TTCCEEE
T ss_pred CceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEc--CCCceEE
Confidence 8887322 0 1234799999999975 3688999
Q ss_pred EEEcCCCCCcCcCceEEEEcC
Q 019112 310 LIKNSWGETWGESGYIRILRD 330 (346)
Q Consensus 310 ivkNSWG~~WGe~Gy~~i~~~ 330 (346)
+||||||++||++||++|+++
T Consensus 336 ~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 336 MVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEECSBCSCSTTTTEEEEEHH
T ss_pred EEEeCCCCCCCcCCeEEecHH
Confidence 999999999999999999986
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.79 E-value=2.4e-19 Score=139.40 Aligned_cols=76 Identities=34% Similarity=0.621 Sum_probs=69.8
Q ss_pred CCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccCCCCceEEEcccCCCCCHHHHhhhhcCCCCC
Q 019112 33 MHEPSIVEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKEGNRTYKLGTNEFSDLTNEEFRASYTGYNRP 109 (346)
Q Consensus 33 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~~~~s~~~g~N~fsd~t~~E~~~~~~~~~~~ 109 (346)
.++.++...|++|+++|+|.|.+.+|+..|+.||++|+++|++||++ +.+|++|+|+|+|||.+||+++++|.+++
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 45678899999999999999999889999999999999999999997 58999999999999999999999887654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.74 E-value=2e-18 Score=128.32 Aligned_cols=68 Identities=31% Similarity=0.521 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHHccC---CCCceEEEcccCCCCCHHHHhhhhcCCCC
Q 019112 39 VEKHEQWMAQHGRTYKDELEKAMRLTIFKQNLEYIEKANKE---GNRTYKLGTNEFSDLTNEEFRASYTGYNR 108 (346)
Q Consensus 39 ~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~I~~~N~~---~~~s~~~g~N~fsd~t~~E~~~~~~~~~~ 108 (346)
...|++|+.+|+|.|.+.+|+..| .||.+|++.|++||++ +..+|++|+|+|+|||.+|| +.++|..+
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~~ 77 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKKV 77 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCCC
Confidence 468999999999999888899999 9999999999999985 35789999999999999999 88887654
No 46
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=97.47 E-value=0.0014 Score=54.32 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=87.8
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHHh--------cCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcC
Q 019112 147 KNQGHCGSCWAFSAVAAVEGITQIT--------GGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYP 218 (346)
Q Consensus 147 kdQg~cGsCwAfA~~~~le~~~~~~--------~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yP 218 (346)
..||.-+-|-+|+.++.|-+..... ..-.+.+|+++|.++ |..+...++|.... |-..
T Consensus 25 ETQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t--------~~~~~q~Iky~~s~-G~~~----- 90 (183)
T 1pxv_A 25 EQQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC--------ATFPNQMIEYGKSQ-GRDI----- 90 (183)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC--------CBCHHHHHHHHHHT-TCCC-----
T ss_pred eccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc--------CCCHHHHHHHHHHc-CcCh-----
Confidence 3699999999999999987654211 112467888888873 45788999998854 4321
Q ss_pred CCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEe
Q 019112 219 YQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGF 297 (346)
Q Consensus 219 Y~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGy 297 (346)
.. .... -+.+.+++.+. +.|+.+...-..+ .......+||++||||
T Consensus 91 ----------------~~----~nr~--ls~neV~~~i~~Nk~I~v~~~~v~e-----------~~~~~~~gHA~av~Gy 137 (183)
T 1pxv_A 91 ----------------HY----QEGV--PSYNQVDQLTKDNVGIMILAQSVSQ-----------NPNDPHLGHALAVVGN 137 (183)
T ss_dssp ----------------EE----EESC--CCHHHHHHHHHTTCCEEEEEECCCS-----------STTSCCCEEEEEEEEE
T ss_pred ----------------hH----hcCC--CCHHHHHHHHhcCCcEEEEcccccc-----------CCCCccCceeEEEEee
Confidence 00 0112 25688899997 7899877653211 2233467999999999
Q ss_pred eccccCCCccEEEEEcCCCCCcCcCceEEEEcC
Q 019112 298 GTAEEEDGAKYWLIKNSWGETWGESGYIRILRD 330 (346)
Q Consensus 298 g~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~~~ 330 (346)
-.- ++.+|.++=|-|-. |++-++.+
T Consensus 138 a~~---~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 138 AKI---NDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp EEE---TTEEEEEEECTTCS-----SCEEEETT
T ss_pred eec---CCCeEEEEeCCccC-----CcEeecCC
Confidence 887 57789999887743 66666544
No 47
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=97.40 E-value=0.0027 Score=58.03 Aligned_cols=120 Identities=23% Similarity=0.301 Sum_probs=81.7
Q ss_pred cCCCCCccHHHHHHHHHHHHHHH--------HhcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcC
Q 019112 147 KNQGHCGSCWAFSAVAAVEGITQ--------ITGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYP 218 (346)
Q Consensus 147 kdQg~cGsCwAfA~~~~le~~~~--------~~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yP 218 (346)
..||.-+-|-+||.++.|-+... +.+.-...+|+++|.++ |..+...++|+... |.-
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t--------s~~~~q~Iky~qsy-G~~------ 265 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC--------ATFPNQMIEYGKSQ-GRD------ 265 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC--------CCCHHHHHHHHHHT-TEE------
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc--------CCCHHHHHHHHHHh-Ccc------
Confidence 46999999999999998866432 11112356888888873 45788999998743 421
Q ss_pred CCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEe
Q 019112 219 YQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGF 297 (346)
Q Consensus 219 Y~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGy 297 (346)
+......+ +.+.+++.+. +.||.+..+...+. ..+...+||++||||
T Consensus 266 -------------------~~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~~~~gHAlavvGy 313 (367)
T 1x9y_A 266 -------------------IHYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PNDPHLGHALAVVGN 313 (367)
T ss_dssp -------------------EEEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSSCCCSEEEEEEEE
T ss_pred -------------------hhhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCCccCceeEEEEec
Confidence 11111222 5677888887 78999887754111 123467999999999
Q ss_pred eccccCCCccEEEEEcCCC
Q 019112 298 GTAEEEDGAKYWLIKNSWG 316 (346)
Q Consensus 298 g~~~~~~g~~ywivkNSWG 316 (346)
-.. ++.+|.++=|-|-
T Consensus 314 A~~---~~~~~y~~WNPW~ 329 (367)
T 1x9y_A 314 AKI---NDQEKLIYWNPWD 329 (367)
T ss_dssp EEE---TTEEEEEEECTTC
T ss_pred ccc---CCCcEEEEecCcc
Confidence 665 4788999977774
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=97.31 E-value=0.0051 Score=50.77 Aligned_cols=120 Identities=16% Similarity=0.213 Sum_probs=81.4
Q ss_pred cCCCCCccHHHHHHHHHHHHHHHH--------hcCCCcccCHHHHhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCcC
Q 019112 147 KNQGHCGSCWAFSAVAAVEGITQI--------TGGKLIELSEQQLVDCSTDNNGCSGGLMDKAFEYIIENKGLATEADYP 218 (346)
Q Consensus 147 kdQg~cGsCwAfA~~~~le~~~~~--------~~~~~~~lS~q~l~~c~~~~~gc~GG~~~~a~~~~~~~~Gi~~e~~yP 218 (346)
..||.-+-|-+|+.++.|-+.... ...-...+|+++|..+. ..+...++|.... |--.
T Consensus 16 ETQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~~--------~t~~e~iky~~s~-g~~~----- 81 (174)
T 1cv8_A 16 ETQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTG--------LTPREMIYFGQTQ-GRSP----- 81 (174)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHCC--------CCHHHHHHHHHHT-TCCC-----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhcC--------CCHHHHHHHHHHc-CCCh-----
Confidence 369999999999999998765421 11224679999999554 4678899998765 3210
Q ss_pred CCCCCCcccccccccceeeeceeEeCCCCcHHHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEe
Q 019112 219 YQQEQGTCDKQKEKAAAATIGKYEDLPKGDEHALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGF 297 (346)
Q Consensus 219 Y~~~~~~c~~~~~~~~~~~i~~y~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGy 297 (346)
.+ .... -+.+.+++++. +.|+.+..+-. +. +.+...+||++||||
T Consensus 82 ------------------~~--~n~~--ls~~eV~~~~~~nk~i~i~~~~v-e~-----------~~~~~~gHAlav~Gy 127 (174)
T 1cv8_A 82 ------------------QL--LNRM--TTYNEVDNLTKNNKGIAILGSRV-ES-----------RNGMHAGHAMAVVGN 127 (174)
T ss_dssp ------------------EE--ESSC--CCHHHHHHHHHTTCCEEEEEEES-SC-----------BTTBCCEEEEEEEEE
T ss_pred ------------------hh--hcCC--CCHHHHHHHHhcCCceEEEcccc-cC-----------CCCCCCceeEEEEee
Confidence 00 0011 25678889997 68887766543 11 112457899999999
Q ss_pred eccccCCCccEEEEEcCCC
Q 019112 298 GTAEEEDGAKYWLIKNSWG 316 (346)
Q Consensus 298 g~~~~~~g~~ywivkNSWG 316 (346)
-.- .+|.+|.++=|-|-
T Consensus 128 ~~~--~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 128 AKL--NNGQEVIIIWNPWD 144 (174)
T ss_dssp EEE--TTSCEEEEEECTTC
T ss_pred eee--cCCceEEEEeCCcc
Confidence 874 36789999988874
No 49
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=81.03 E-value=5.8 Score=34.52 Aligned_cols=55 Identities=24% Similarity=0.396 Sum_probs=34.1
Q ss_pred EeCCCCcHHHHHHHHh-cCCeEEEEEeccc-----ccccc--CCceEeCCCCCCCCeeEEEEEeec
Q 019112 242 EDLPKGDEHALLQAVT-KQPVSVCVEASGQ-----AFRFY--KRGVLNAECGDNCDHGVAVVGFGT 299 (346)
Q Consensus 242 ~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~-----~f~~y--~~Gi~~~~~~~~~~Hav~iVGyg~ 299 (346)
..++..+.++|++.|. ..||+|-....-. .|..+ .+|-... ...+|+|+|+||+.
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~~---~~~~H~VVl~GYd~ 187 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSI---TYNEHCVVLIGYDQ 187 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEEE---CTTEEEEEEEEECS
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCceee---ccCCeEEEEEEEeC
Confidence 4566668999999998 5799987654210 11111 1222111 23589999999975
No 50
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=58.79 E-value=23 Score=32.96 Aligned_cols=53 Identities=17% Similarity=0.368 Sum_probs=35.6
Q ss_pred HHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEE
Q 019112 250 HALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRIL 328 (346)
Q Consensus 250 ~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~ 328 (346)
+.|++.|. ..||.+.-.-. .++||.+|=||..+ +||-|==.||-. .+|||.+.
T Consensus 290 ~~i~~eL~~~rPV~~~G~~~------------------~gGHAfV~DGy~~~------~~~H~NwGWgG~--~nGyy~l~ 343 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVGK------------------VGGHAFVIDGADGR------NFYHVNWGWGGV--SDGFFRLD 343 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEET------------------TEEEEEEEEEECSS------SEEEEECSSTTT--TCEEEESC
T ss_pred HHHHHHHHcCCCEEEEeecC------------------CCceEEEECcccCC------CeEEEEeCcCCC--CCcceecc
Confidence 55777787 78997643211 26999999999643 577664334321 58999985
No 51
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=52.00 E-value=26 Score=31.80 Aligned_cols=59 Identities=17% Similarity=0.348 Sum_probs=36.2
Q ss_pred HHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcCcCceEEEE
Q 019112 250 HALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWGESGYIRIL 328 (346)
Q Consensus 250 ~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WGe~Gy~~i~ 328 (346)
+.|++.|. ..||.+.-.-. .. . +..++||.+|=||..+ +||-|-=.||-. .+|||.+.
T Consensus 239 ~~i~~eL~~~rPV~~~G~~~--~~------~-----~~~~GHafV~DGY~~~------~~~H~NwGWgG~--~nGyy~l~ 297 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVSP--GS------M-----GQDAGHAFVIDGYNKA------GLVSVNWGWNGD--VDGYYKID 297 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT------SCEEEECSSTTT--TCEEECCT
T ss_pred HHHHHHHHhCCCEEEEEecC--CC------C-----CCCCceEEEEccccCC------CeEEEecCCCCC--CCceEecc
Confidence 46777887 78987643211 11 0 1357999999999753 577764444421 48999885
Q ss_pred c
Q 019112 329 R 329 (346)
Q Consensus 329 ~ 329 (346)
.
T Consensus 298 ~ 298 (321)
T 3bb7_A 298 L 298 (321)
T ss_dssp T
T ss_pred C
Confidence 3
No 52
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=51.05 E-value=28 Score=30.63 Aligned_cols=51 Identities=22% Similarity=0.546 Sum_probs=36.3
Q ss_pred HHHHHHHh-cCCeEEEEEeccccccccCCceEeCCCCCCCCeeEEEEEeeccccCCCccEEEEEcCCCCCcC--cCceEE
Q 019112 250 HALLQAVT-KQPVSVCVEASGQAFRFYKRGVLNAECGDNCDHGVAVVGFGTAEEEDGAKYWLIKNSWGETWG--ESGYIR 326 (346)
Q Consensus 250 ~~i~~~l~-~gPV~v~~~~~~~~f~~y~~Gi~~~~~~~~~~Hav~iVGyg~~~~~~g~~ywivkNSWG~~WG--e~Gy~~ 326 (346)
+.|++.|. ..||.+.-.- ..++||.+|=||..+ +|+-|- || || .+|||.
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~------~~~H~N--wG--WgG~~nGYy~ 223 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR------NFYHVN--WG--WGGVSDGFFR 223 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS------SCEEEE--CS--STTTTCEEEC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC------CEEEEE--cC--CCCCCCceee
Confidence 56788887 7899876421 146999999999753 466653 55 44 589998
Q ss_pred EE
Q 019112 327 IL 328 (346)
Q Consensus 327 i~ 328 (346)
+.
T Consensus 224 l~ 225 (261)
T 4d8b_A 224 LD 225 (261)
T ss_dssp TT
T ss_pred cc
Confidence 85
No 53
>2j4t_A Angiogenin-4; angiogenesis, endonuclease, differentiation, cancer, nuclease, hydrolase, ribonuclease, developmental protein; 2.02A {Mus musculus}
Probab=35.12 E-value=12 Score=29.88 Aligned_cols=11 Identities=36% Similarity=0.597 Sum_probs=8.5
Q ss_pred HHHHHHHHHhC
Q 019112 40 EKHEQWMAQHG 50 (346)
Q Consensus 40 ~~f~~~~~~~~ 50 (346)
..|+.|+++|=
T Consensus 27 ~~~~~F~~qHi 37 (144)
T 2j4t_A 27 ERYEKFLRQHY 37 (144)
T ss_dssp HHHHHHHHHHB
T ss_pred hHHHHHHHHeE
Confidence 45888988876
No 54
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=26.32 E-value=60 Score=29.58 Aligned_cols=40 Identities=20% Similarity=0.430 Sum_probs=0.0
Q ss_pred CeeEEEEEeec-cccCCCccEEEEEcCCC-CCcC-------------------------cCceEEEE
Q 019112 289 DHGVAVVGFGT-AEEEDGAKYWLIKNSWG-ETWG-------------------------ESGYIRIL 328 (346)
Q Consensus 289 ~Hav~iVGyg~-~~~~~g~~ywivkNSWG-~~WG-------------------------e~Gy~~i~ 328 (346)
+||-.|++... +....+...-.+||-|| ..|- ++|-|||+
T Consensus 246 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~dG~FWMs 312 (339)
T 2r9f_A 246 GHAYSVTDAKQVTYQGQRVNLIRMRNPWGEVEWKGPWSDNSYEWNKVDPYEREQLRVKMEDGEFWMS 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECTTSCCCCCSTTSTTCGGGGGSCHHHHHHHCCCCCSSEEEEE
T ss_pred CceEEEeEEEEEecCCCceEEEEEeCCCCCccccCCCCcCCccccccCHHHHHHhCCCCCCCEEEEE
No 55
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=22.08 E-value=19 Score=29.73 Aligned_cols=24 Identities=13% Similarity=0.319 Sum_probs=0.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhh
Q 019112 3 LKFEKSFIIPMFVIIILVITCASQ 26 (346)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~ 26 (346)
.|.+|++++++++|.++++.+++.
T Consensus 25 Mk~~kk~~la~~al~~l~l~s~~A 48 (175)
T 3lay_A 25 MKRNNKSAIALIALSLLALSSGAA 48 (175)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 488999999999888666665443
No 56
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=21.30 E-value=76 Score=18.65 Aligned_cols=19 Identities=5% Similarity=0.294 Sum_probs=13.8
Q ss_pred chhhHHHHHHHHHHHHHHH
Q 019112 4 KFEKSFIIPMFVIIILVIT 22 (346)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~ 22 (346)
.+|+..+...|++++++..
T Consensus 11 ELNRTSLy~GLLlifvlav 29 (37)
T 3arc_L 11 ELNRTSLYLGLLLILVLAL 29 (37)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred eechhhHHHHHHHHHHHHH
Confidence 5778888888887766554
No 57
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=20.35 E-value=94 Score=28.23 Aligned_cols=40 Identities=23% Similarity=0.568 Sum_probs=0.0
Q ss_pred CeeEEEEEeec-cccCCCccEEEEEcCCCC-----CcC----------------------cCceEEEE
Q 019112 289 DHGVAVVGFGT-AEEEDGAKYWLIKNSWGE-----TWG----------------------ESGYIRIL 328 (346)
Q Consensus 289 ~Hav~iVGyg~-~~~~~g~~ywivkNSWG~-----~WG----------------------e~Gy~~i~ 328 (346)
+||-.|++... +...++...-.+||-||. .|. ++|-|||+
T Consensus 245 ~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWMs 312 (339)
T 1ziv_A 245 GHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDSSPEWRSVGPAEQKRLCHTALDDGEFWMA 312 (339)
T ss_dssp TCCEEEEEEEEEEETTEEEEEEEEECCSSCCCCCSTTSTTCHHHHHSCHHHHHHTTCCCCSSSEEEEE
T ss_pred CeeEEEeEEEEEecCCCceEEEEecCCCCCCccCCCCCcCChhccccCHHHHHHhhCCCCCCCEEEEE
Done!