BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019117
(346 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZY6|FIE2_MAIZE Polycomb group protein FIE2 OS=Zea mays GN=FIE2 PE=2 SV=1
Length = 379
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/328 (81%), Positives = 293/328 (89%), Gaps = 1/328 (0%)
Query: 5 AIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQ 64
+GCE GSL PS+KREY+ K EGKRPLYA+ FNF+D+RY++VFATVGGNRVT Y+
Sbjct: 9 GLGCEAAEGSLVPSRKREYKPCGKHTEGKRPLYAIGFNFMDARYYDVFATVGGNRVTTYR 68
Query: 65 CLEGGVIAALQSYVDEDKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKS 123
CLE G A LQ+YVDEDK+ESFYT+SWA + VDG P LVA G NGIIRVI+ + EKL KS
Sbjct: 69 CLENGSFALLQAYVDEDKDESFYTLSWARDHVDGSPLLVAAGSNGIIRVINCATEKLAKS 128
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
FVGHGDSINEIRTQPLKPSL++SASKDESVRLWNV TGICILIFAGAGGHRNEVLSVDFH
Sbjct: 129 FVGHGDSINEIRTQPLKPSLIISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFH 188
Query: 184 PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 243
PSDI R ASCGMDNTVKIWSMKEFW YV+KS++WTDLPSKFPTKYVQFPV IA+VHSNYV
Sbjct: 189 PSDIERFASCGMDNTVKIWSMKEFWLYVDKSYSWTDLPSKFPTKYVQFPVLIAAVHSNYV 248
Query: 244 DCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 303
DC RWLGDFILSKSVDNEIVLWEPK KEQSPGEG+ DILQKYPVPECDIWFIKFSCDFH+
Sbjct: 249 DCTRWLGDFILSKSVDNEIVLWEPKTKEQSPGEGSIDILQKYPVPECDIWFIKFSCDFHF 308
Query: 304 NAAAIGNREGKIFVWELQSSPPVLIARL 331
N AIGNREGKI+VWE+QSSPPVLIARL
Sbjct: 309 NQLAIGNREGKIYVWEVQSSPPVLIARL 336
>sp|Q9LT47|FIE_ARATH Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
OS=Arabidopsis thaliana GN=FIE PE=1 SV=2
Length = 369
Score = 560 bits (1443), Expect = e-159, Method: Compositional matrix adjust.
Identities = 251/331 (75%), Positives = 296/331 (89%)
Query: 1 MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV 60
M++ +G E +VGSLTPS K+ Y+VTN++QEGK+PLYAVVFNF+D+R+F+VF T GGNR+
Sbjct: 1 MSKITLGNESIVGSLTPSNKKSYKVTNRIQEGKKPLYAVVFNFLDARFFDVFVTAGGNRI 60
Query: 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL 120
T+Y CL G I+ALQSY DEDKEESFYTVSWAC V+G P++ AGG+ GIIRVIDV++E +
Sbjct: 61 TLYNCLGDGAISALQSYADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETI 120
Query: 121 HKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 180
HKS VGHGDS+NEIRTQPLKP LV++ASKDESVRLWNV+TGICILIFAGAGGHR EVLSV
Sbjct: 121 HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSV 180
Query: 181 DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 240
DFHPSDIYR ASCGMD T+KIWSMKEFWTYVEKSFTWTD PSKFPTK+VQFPVF AS+H+
Sbjct: 181 DFHPSDIYRFASCGMDTTIKIWSMKEFWTYVEKSFTWTDDPSKFPTKFVQFPVFTASIHT 240
Query: 241 NYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 300
NYVDCNRW GDFILSKSVDNEI+LWEP++KE SPGEG +D+L +YPVP CDIWFIKFSCD
Sbjct: 241 NYVDCNRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIWFIKFSCD 300
Query: 301 FHYNAAAIGNREGKIFVWELQSSPPVLIARL 331
H ++ AIGN+EGK++VW+L+S PPVLI +L
Sbjct: 301 LHLSSVAIGNQEGKVYVWDLKSCPPVLITKL 331
>sp|Q8VZY7|FIE1_MAIZE Polycomb group protein FIE1 OS=Zea mays GN=FIE1 PE=2 SV=1
Length = 461
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 217/332 (65%), Positives = 265/332 (79%), Gaps = 1/332 (0%)
Query: 1 MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV 60
+ R +GCE + G L PS+KREY+ +K G P+YA+ FNFID RY++VFA N V
Sbjct: 63 VPRQGLGCEVVEGLLVPSRKREYKPNSKYTVGNHPIYAIGFNFIDMRYYDVFAIASCNSV 122
Query: 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEK 119
+Y+CLE G LQ+YVDEDK+ESFYT+SW + VD P LVA G N IIRVI+ + EK
Sbjct: 123 IIYRCLENGGFGLLQNYVDEDKDESFYTLSWTIDQVDSSPLLVAAGSNRIIRVINCATEK 182
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 179
L KS VGHG SI+EIRT KPSL++SASKDES+RLWNV TGICIL+FAGAGGHR++VLS
Sbjct: 183 LDKSLVGHGGSIHEIRTHASKPSLIISASKDESIRLWNVHTGICILVFAGAGGHRHDVLS 242
Query: 180 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 239
VDFHP+++ ASCGMDNTVKIWSMKEFW YVEKS++WT PSKFPT+ +QFPV A+VH
Sbjct: 243 VDFHPTEVGIFASCGMDNTVKIWSMKEFWIYVEKSYSWTGHPSKFPTRNIQFPVLTAAVH 302
Query: 240 SNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 299
S+YVDC RWLGDFILSKSV N ++LWEPK ++ PGEG+ D+LQKYPVP+C +WF+KFSC
Sbjct: 303 SDYVDCTRWLGDFILSKSVKNAVLLWEPKPDKRRPGEGSVDVLQKYPVPKCSLWFMKFSC 362
Query: 300 DFHYNAAAIGNREGKIFVWELQSSPPVLIARL 331
DF+ N AIGN +G+I+VWE+QSSPPVLI RL
Sbjct: 363 DFYSNQMAIGNNKGEIYVWEVQSSPPVLIDRL 394
>sp|Q8UUP2|EEDA_XENLA Polycomb protein eed-A OS=Xenopus laevis GN=eed-a PE=1 SV=1
Length = 438
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 202/321 (62%), Gaps = 24/321 (7%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASCGMD 196
P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SCGMD
Sbjct: 198 RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMD 254
Query: 197 NTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCNRWL 249
+++K+W + T +++S+ + PSK F ++ + FP F +H NYVDC RWL
Sbjct: 255 HSLKLWRINSLRMKTAIKESYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWL 312
Query: 250 GDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDFHYN 304
GD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK 372
Query: 305 AAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L++ P
Sbjct: 373 MLALGNQVGKLYVWDLEAEDP 393
>sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musculus GN=Eed PE=1 SV=1
Length = 441
Score = 251 bits (640), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 202/324 (62%), Gaps = 24/324 (7%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 193
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 246
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 247 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 301
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 302 HYNAAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDP 396
>sp|O75530|EED_HUMAN Polycomb protein EED OS=Homo sapiens GN=EED PE=1 SV=2
Length = 441
Score = 251 bits (640), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 202/324 (62%), Gaps = 24/324 (7%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 193
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 246
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 247 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 301
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 302 HYNAAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDP 396
>sp|Q3SZ25|EED_BOVIN Polycomb protein EED OS=Bos taurus GN=EED PE=2 SV=1
Length = 441
Score = 251 bits (640), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 202/324 (62%), Gaps = 24/324 (7%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 193
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 198 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 254
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 246
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 255 GMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 312
Query: 247 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 301
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 313 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 372
Query: 302 HYNAAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 373 WQKMLALGNQVGKLYVWDLEVEDP 396
>sp|Q566T0|EED_DANRE Polycomb protein eed OS=Danio rerio GN=eed PE=2 SV=2
Length = 443
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 196/324 (60%), Gaps = 24/324 (7%)
Query: 20 KREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 81 KYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 139
Query: 77 YVDEDKEESFYTVSWACNVDGI-PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 140 YVDADADENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELK 199
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 193
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS DF D+ +I SC
Sbjct: 200 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADF---DLLGEKIMSC 256
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 246
GMD+++K+W + + + S+ + PSK F ++ + FP F +H NYVDC
Sbjct: 257 GMDHSLKLWRLDSERLQRAIRGSYEYN--PSKTNRPFVSQKIHFPDFSTRDIHRNYVDCV 314
Query: 247 RWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDF 301
RWLGD ILSKS +N IV W+P E P E IL ++ +CDIW+++FS DF
Sbjct: 315 RWLGDLILSKSCENAIVCWKPGRMEDDIDRIKPNESNVTILGRFDYSQCDIWYMRFSMDF 374
Query: 302 HYNAAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 375 WQKMLALGNQVGKLYVWDLEVEDP 398
>sp|Q5ZKH3|EED_CHICK Polycomb protein EED OS=Gallus gallus GN=EED PE=2 SV=1
Length = 446
Score = 249 bits (635), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 202/324 (62%), Gaps = 24/324 (7%)
Query: 20 KREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 84 KYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 142
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 143 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 202
Query: 136 TQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASC 193
P P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SC
Sbjct: 203 FHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSC 259
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCN 246
GMD+++K+W + K +++S+ + P+K F ++ + FP F +H NYVDC
Sbjct: 260 GMDHSLKLWRINSKRMINAIKESYEYN--PNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 317
Query: 247 RWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDF 301
RWLGD ILSKS +N IV W+P KM++ P E IL ++ +CDIW+++FS DF
Sbjct: 318 RWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 377
Query: 302 HYNAAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 378 WQKMLALGNQVGKLYVWDLEIEDP 401
>sp|Q6AZS2|EEDB_XENLA Polycomb protein eed-B OS=Xenopus laevis GN=eed-b PE=1 SV=2
Length = 438
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 200/321 (62%), Gaps = 24/321 (7%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASCGMD 196
P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SCGMD
Sbjct: 198 RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMD 254
Query: 197 NTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCNRWL 249
+++K+W + T +++S+ + P+K F ++ V FP F +H NYVDC RWL
Sbjct: 255 HSLKLWRINSLRMKTAIKESYDYN--PNKTNRPFVSQKVHFPDFSTRDIHRNYVDCVRWL 312
Query: 250 GDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDFHYN 304
GD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++FS DF
Sbjct: 313 GDLILSKSCENAIVCWKPGKMEDDIEKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQK 372
Query: 305 AAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 373 MLALGNQVGKLYVWDLEVEDP 393
>sp|Q28DT7|EED_XENTR Polycomb protein eed OS=Xenopus tropicalis GN=eed PE=2 SV=1
Length = 438
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 199/321 (61%), Gaps = 24/321 (7%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGEIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY--RIASCGMD 196
P+L++S SKD ++RLWN+QT + IF G GHR+EVLS D+ D+ +I SCGMD
Sbjct: 198 RDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY---DLLGEKIMSCGMD 254
Query: 197 NTVKIWSMKEFW--TYVEKSFTWTDLPSK----FPTKYVQFPVF-IASVHSNYVDCNRWL 249
+++K+W + T + +S+ + P+K F ++ + FP F +H NYVDC RWL
Sbjct: 255 HSLKLWRINSLRMKTAIRESYEYN--PNKTNRPFVSQKIHFPDFSTRDIHRNYVDCVRWL 312
Query: 250 GDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTADILQKYPVPECDIWFIKFSCDFHYN 304
GD ILSKS +N IV W+P KM++ E IL ++ +CDIW+++FS DF
Sbjct: 313 GDLILSKSCENAIVCWKPGKMEDDIDKIKASESNVTILGRFDYSQCDIWYMRFSMDFWQK 372
Query: 305 AAAIGNREGKIFVWELQSSPP 325
A+GN+ GK++VW+L+ P
Sbjct: 373 MLALGNQVGKLYVWDLEVEDP 393
>sp|Q26458|ESC_DROVI Polycomb protein esc OS=Drosophila virilis GN=esc PE=3 SV=1
Length = 425
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 189/322 (58%), Gaps = 14/322 (4%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P Y+ ++E ++ V FN + VFAT G NR TVY+C G + L
Sbjct: 56 PKSGAAYKYDTHVKENHGANIFGVSFNTLLGKDEPQVFATAGSNRCTVYECPRKGGLTLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
++ P K L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF+ RI S
Sbjct: 176 LKFHPHKLQLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDFNMRGD-RIVSS 234
Query: 194 GMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCNRW 248
GMD+++K+W + +EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 235 GMDHSLKLWCLNTQEFQHKIELSQTFSQEKSTLPFPTITKHFPDFSTRDIHRNYVDCVQW 294
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHY 303
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 295 FGNFVLSKSCENAIVCWKPGQLHQSFEQLKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQ 354
Query: 304 NAAAIGNREGKIFVWELQSSPP 325
A+GN++GK++VWE+ S P
Sbjct: 355 KVIALGNQQGKVYVWEMDPSDP 376
>sp|Q24338|ESC_DROME Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1
Length = 425
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 189/322 (58%), Gaps = 14/322 (4%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P + Y+ ++E ++ V FN + VFAT G NRVTVY+C G + L
Sbjct: 56 PKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
++ P K L++S SKD ++RLWN+Q+ +CI I G GHR+EVLS+DF+ RI S
Sbjct: 176 LKFHPHKLQLLLSGSKDHAIRLWNIQSHVCIAILGGVEGHRDEVLSIDFNMRGD-RIVSS 234
Query: 194 GMDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYVDCNRW 248
GMD+++K+W + EF +E S T++ S FPT FP F +H NYVDC +W
Sbjct: 235 GMDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPFPTVTKHFPDFSTRDIHRNYVDCVQW 294
Query: 249 LGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCDFHY 303
G+F+LSKS +N IV W+P QS P + + I+ ++ EC+IWF++F +
Sbjct: 295 FGNFVLSKSCENAIVCWKPGQLHQSFEQVKPSDSSCTIIAEFEYDECEIWFVRFGFNPWQ 354
Query: 304 NAAAIGNREGKIFVWELQSSPP 325
A+GN++GK++VWEL S P
Sbjct: 355 KVIALGNQQGKVYVWELDPSDP 376
>sp|O16023|ESC_MUSDO Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1
Length = 428
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 195/327 (59%), Gaps = 18/327 (5%)
Query: 14 SLTPSKKREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVI 71
S + +K+ Y+ L+E + ++ V FN + + + VFAT G NR +Y+C G +
Sbjct: 54 SKSKAKRPAYKYDCHLKEDHGQAIFGVSFNHLLGKDQSMVFATAGSNRCNIYECPRKGGL 113
Query: 72 AALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS 130
+ Y D D +E FYT SW+ ++ P L G G+IRVID+ + ++VGHG +
Sbjct: 114 KLIMCYADPDPDEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQA 173
Query: 131 INEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-- 188
INE++ P + +L++S SKD ++RLWN+QT +CI IF G GHR+EVLS+DF D+
Sbjct: 174 INELKFHPRQANLLLSGSKDHAIRLWNIQTHVCIAIFGGVEGHRDEVLSIDF---DLRGE 230
Query: 189 RIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--FPTKYVQFPVF-IASVHSNYV 243
RI S GMD+++K+W + EF +E S T+ S+ FPT FP F +H NYV
Sbjct: 231 RIMSSGMDHSLKLWRIDTPEFKDKIEMSRTFNPNKSQLPFPTIMQHFPEFSTRDIHRNYV 290
Query: 244 DCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFS 298
DC +W GDF+LSKS +N IV W+P Q+ P + + I+ ++ EC+IWF++F
Sbjct: 291 DCVQWFGDFVLSKSCENSIVCWKPGQLHQTLSQLKPNDPSCTIISEFNYDECEIWFVRFG 350
Query: 299 CDFHYNAAAIGNREGKIFVWELQSSPP 325
+ + A+GN+ GK++VWEL S P
Sbjct: 351 FNPWHKIVALGNQYGKVYVWELDPSDP 377
>sp|Q9GYS1|MES6_CAEEL Polycomb protein mes-6 OS=Caenorhabditis elegans GN=mes-6 PE=1 SV=2
Length = 459
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 162/384 (42%), Gaps = 83/384 (21%)
Query: 20 KREYRVTNKL-QEGKRPLYAVVFN---FIDSRYFNVFATVGGNRVTVYQC--------LE 67
KR + +T KL ++ K+ +Y FN ID ATVGG+ + +Y L+
Sbjct: 24 KRPFVLTAKLLEDQKKAIYGCAFNQYAGIDEE--QAVATVGGSFLHMYSVPIDINNIELQ 81
Query: 68 GGVIAALQSYVDEDKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLH 121
++EES +TV+W + D PF +V GG G I VID + KL
Sbjct: 82 WSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLS 141
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
G IN+IRT P +L+V AS D+S+R+ +++ C+++ G H +LSVD
Sbjct: 142 NRLRSVGWEINDIRTCPANSNLIVCASSDQSIRIHHIRNEACLIVIGGLECHAGTILSVD 201
Query: 182 FHPSDIYRIASCGMDNTVKIW--SMKEFWTYVE--------------------------- 212
+ +D I SCG D+ + W S+K+ ++E
Sbjct: 202 W-STDGDFILSCGFDHQLMEWDLSVKQVKEHLERACKALHQDKINVLTQSQDIPYVSKGT 260
Query: 213 --KSFTWTDLPSK------------FPTKYVQFPVFIAS-----VHSNYVDCNRWL--GD 251
KS ++P K P P++ S +HS+YVDC R+L +
Sbjct: 261 MRKSAVSRNIPDKEEDQLLELHRELIPRPSCLLPIYTPSSVSTDMHSDYVDCIRFLIGTN 320
Query: 252 FILSKSVDNE--IVLWE---PKMKEQSPGEGT-------ADILQKYPVPECDIWFIKFSC 299
+ LSK NE I W PK + ++ G + VP WFIKF+
Sbjct: 321 YALSKGCGNEKAIHFWRFGPPKGEVENRIHGNVLRPKSCTTKFRTMNVPSGSAWFIKFAV 380
Query: 300 DFHYNAAAIGNREGKIFVWELQSS 323
D G G + ++L+++
Sbjct: 381 DPRRRWLVCGGAGGSVMFFDLRNN 404
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P +P V+S+S D ++LW+
Sbjct: 71 WIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQP-FVLSSSDDMLIKLWDWD 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +C IF G H + V+ V F+P D AS +D TVK+WS+
Sbjct: 130 KGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTVKVWSL 172
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +++ + P P + ++ S+D +VRLW+
Sbjct: 200 PYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELP-ITLTGSEDGTVRLWHS 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P +P V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQP-FVLSSSDDMLIKLWDWD 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +C IF G H + V+ V F+P D AS +D TVK+WS+
Sbjct: 130 KGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTVKVWSL 172
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VRLW+
Sbjct: 200 PYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPELP-IILTGSEDGTVRLWHS 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141
K + + S A + DG L +G + I++ + + K+++GH +S+ I P
Sbjct: 807 KSHTGWVRSVAFSADG-QTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP-DS 864
Query: 142 SLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 201
++VS S D +++LW+ QT ICI GH NEV SV F P D +A +D +V++
Sbjct: 865 KILVSGSGDRTIKLWDCQTHICIKTLH---GHTNEVCSVAFSP-DGQTLACVSLDQSVRL 920
Query: 202 WSMK 205
W+ +
Sbjct: 921 WNCR 924
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+ G + +++ ++S + K+ H D I + P L+ SAS D+SVRLW+
Sbjct: 1034 IIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSP-DGQLLASASADQSVRLWDCC 1092
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
TG C+ I GH N V S F P+ IA+C D TVKIW ++
Sbjct: 1093 TGRCVGILR---GHSNRVYSAIFSPNGEI-IATCSTDQTVKIWDWQQ 1135
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
+RV +V + KL GH + + + P ++ S DE+V+LW+V+ G+CI
Sbjct: 666 VRVWEVKSGKLLLICRGHSNWVRFVVFSP-DGEILASCGADENVKLWSVRDGVCIKTLT- 723
Query: 170 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
GH +EV SV FHP D +AS D T+K+W +++
Sbjct: 724 --GHEHEVFSVAFHP-DGETLASASGDKTIKLWDIQD 757
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L +G + +++ D K S GH D I I P +L SAS D SVRLWN+
Sbjct: 950 ILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLA-SASTDSSVRLWNIS 1008
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
TG C I H + V +V FHP IA+ D TVK+W++
Sbjct: 1009 TGQCFQILL---EHTDWVYAVVFHPQGKI-IATGSADCTVKLWNI 1049
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
+++ D K K+ GH + + +I P ++ SAS D++VR+W+V TG C I
Sbjct: 1128 VKIWDWQQGKCLKTLTGHTNWVFDIAFSP-DGKILASASHDQTVRIWDVNTGKCHHICI- 1185
Query: 170 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
GH + V SV F P D +AS D TV+IW++K
Sbjct: 1186 --GHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVK 1218
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L + G + +++ V + K+ GH + + P +L SAS D++++LW++Q
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLA-SASGDKTIKLWDIQ 756
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
G C+ GH + V V F P D +AS D+T+K+W + +
Sbjct: 757 DGTCLQTLT---GHTDWVRCVAFSP-DGNTLASSAADHTIKLWDVSQ 799
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
LV+G + I++ D K+ GH + + + P +L S D+SVRLWN +
Sbjct: 866 ILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLAC-VSLDQSVRLWNCR 924
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
TG C+ + G+ + L V F P D +AS D TVK+W
Sbjct: 925 TGQCLKAWY---GNTDWALPVAFSP-DRQILASGSNDKTVKLW 963
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L + + +R+ DV+ K H +GH ++ + P +V S S+D++VR+WNV+
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVK 1218
Query: 160 TGICILIF 167
TG C+ I
Sbjct: 1219 TGECLQIL 1226
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 51 VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109
+ A+ G + V ++ +G I L + E ++V A + DG A G +
Sbjct: 698 ILASCGADENVKLWSVRDGVCIKTLTGH-----EHEVFSV--AFHPDGETLASASG-DKT 749
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
I++ D+ + ++ GH D + + P +L SA+ D +++LW+V G C+
Sbjct: 750 IKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAA-DHTIKLWDVSQGKCLRTLK- 807
Query: 170 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
H V SV F +D +AS D T+KIW+
Sbjct: 808 --SHTGWVRSVAF-SADGQTLASGSGDRTIKIWN 838
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L + + +R+ ++S + + + H D + + P + ++ + S D +V+LWN+ T
Sbjct: 993 LASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHP-QGKIIATGSADCTVKLWNIST 1051
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C+ + H +++L + + P D +AS D +V++W
Sbjct: 1052 GQCLKTLS---EHSDKILGMAWSP-DGQLLASASADQSVRLW 1089
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E S + A + DG L + + +R+ D + GH + + P
Sbjct: 1060 EHSDKILGMAWSPDG-QLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSP-NGE 1117
Query: 143 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
++ + S D++V++W+ Q G C+ GH N V + F P D +AS D TV+IW
Sbjct: 1118 IIATCSTDQTVKIWDWQQGKCLKTLT---GHTNWVFDIAFSP-DGKILASASHDQTVRIW 1173
Query: 203 SM 204
+
Sbjct: 1174 DV 1175
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP-YVLSSSDDMLIKLWDWE 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 130 KGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 140 KPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 199
KP L+ + S D + ++W+ QT C+ G H + V +V FHP ++ I + D TV
Sbjct: 199 KPYLI-TGSDDHTAKVWDYQTKSCVQTLEG---HTHNVSAVSFHP-ELPIIITGSEDGTV 253
Query: 200 KIW 202
+IW
Sbjct: 254 RIW 256
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELP-IIITGSEDGTVRIWHA 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + N + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVSVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 69 GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVG 126
G + A+ YV E + V+WA +P +V+G + +++ ++ K + + G
Sbjct: 190 GGVDAIVKYVLEGHDRG---VNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
Query: 127 HGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QTGI 162
H ++++ + K ++VS S+D+S+R+W+ +TG+
Sbjct: 247 HMNNVSSVMFHA-KQDIIVSNSEDKSIRVWDATKRTGL 283
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G I+G I++ D ++ ++ GHG + + P V S S D+++++W+ +
Sbjct: 1150 VASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDKTIKIWDTAS 1208
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C G GG V SV F P D R+AS DNT+KIW
Sbjct: 1209 GTCTQTLEGHGGW---VQSVAFSP-DGQRVASGSSDNTIKIW 1246
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 38 AVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDG 97
A+VF DS +F ++ +E A Q+ E S +V A + DG
Sbjct: 798 ALVFAPTDSMIKKIFKKEEPGWISTISVVEAEWNACTQTL--EGHGSSVLSV--AFSADG 853
Query: 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWN 157
+ +G + I++ D ++ ++ GHG S+ + P + V S S D+++++W+
Sbjct: 854 -QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRER-VASGSDDKTIKIWD 911
Query: 158 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+G C G GG V SV F P D R+AS D+T+KIW
Sbjct: 912 AASGTCTQTLEGHGGR---VQSVAFSP-DGQRVASGSDDHTIKIW 952
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G + I++ D ++ ++ GHG + + P V S S D ++++W+ +
Sbjct: 898 VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSP-DGQRVASGSDDHTIKIWDAAS 956
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C GH + VLSV F P D R+AS D T+KIW
Sbjct: 957 GTCTQTLE---GHGSSVLSVAFSP-DGQRVASGSGDKTIKIW 994
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G + I++ D + ++ GHGDS+ + P V S S D ++++W+ +
Sbjct: 1066 VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSP-DGQRVASGSIDGTIKIWDAAS 1124
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C G GG V SV F P D R+AS +D T+KIW
Sbjct: 1125 GTCTQTLEGHGGW---VHSVAFSP-DGQRVASGSIDGTIKIW 1162
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G + I++ D ++ ++ GHG S+ + P V S S D+++++W+ +
Sbjct: 982 VASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP-DGQRVASGSDDKTIKIWDTAS 1040
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
G C G GG V SV F P D R+AS D+T+KIW
Sbjct: 1041 GTCTQTLEGHGGW---VQSVVFSP-DGQRVASGSDDHTIKIW 1078
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G + I++ D ++ ++ GHG + + P V S S D ++++W+ +
Sbjct: 1192 VASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSP-DGQRVASGSSDNTIKIWDTAS 1250
Query: 161 GIC 163
G C
Sbjct: 1251 GTC 1253
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 6/115 (5%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
S A N DG L +G + +R+ ++S+ K +F GH ++ + P +++ S S
Sbjct: 1289 SVAFNPDG-SMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP-DGTMLASGSD 1346
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D++VRLW++ +G C+ F GH N V SV F P D +AS D TV++WS+
Sbjct: 1347 DQTVRLWSISSGECLYTFL---GHTNWVGSVIFSP-DGAILASGSGDQTVRLWSI 1397
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESV 153
N DG L +G + +R+ ++++ K +F GH +N + P S++ S S D++V
Sbjct: 1209 NPDG-STLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNP-DGSMLASGSSDKTV 1266
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
RLW++ + C+ F GH N V SV F+P D +AS D TV++W +
Sbjct: 1267 RLWDISSSKCLHTFQ---GHTNWVNSVAFNP-DGSMLASGSGDQTVRLWEI 1313
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 90 SWACNV----DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
SW +V DG L +G + +R+ D+S+ + K+F GH + + P ++
Sbjct: 907 SWVNSVGFSQDG-KMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP-NSLMLA 964
Query: 146 SASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
S S D++VRLW++ +G C+ IF GH V SV F+ D +A+ D TV++W +
Sbjct: 965 SGSSDQTVRLWDISSGECLYIFQ---GHTGWVYSVAFNL-DGSMLATGSGDQTVRLWDI 1019
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG L +G + +R+ +S+ K + GH + + I P +L+ S S D++VRL
Sbjct: 1379 DG-AILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRL 1436
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
WN+ +G C+ GH N V SV F SD +AS D T+K+W +K
Sbjct: 1437 WNISSGECLYTLH---GHINSVRSVAF-SSDGLILASGSDDETIKLWDVK 1482
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
L G + I+R+ D+S++K + GH + +N + P +L S S D++VRLW++ +
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISS 1189
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
C+ I GH + V SV F+P D +AS D TV++W +
Sbjct: 1190 SKCLYILQ---GHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEI 1229
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 89 VSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
SW +V P L +G + +R+ +S+ + +F+GH + + + P +++
Sbjct: 1326 TSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP-DGAILA 1384
Query: 146 SASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
S S D++VRLW++ +G C+ GH N V S+ F P D +AS D TV++W++
Sbjct: 1385 SGSGDQTVRLWSISSGKCLYTLQ---GHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNI 1439
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
S A N+DG L G + +R+ D+S+ + F GH + + +++ S S
Sbjct: 995 SVAFNLDG-SMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS-DGAMLASGSD 1052
Query: 150 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
D++VRLW++ +G C+ GH + V SV F P D +AS G D V++W +
Sbjct: 1053 DQTVRLWDISSGNCLYTLQ---GHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDI 1103
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 79 DEDKEESFYTVSWACN-VDGIPF------LVAGGINGIIRVIDVSNEKLHKSFVGHGDSI 131
D ++ YT+ N V+ + F L +G + +R+ D+S+ K GH +
Sbjct: 1144 DISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWV 1203
Query: 132 NEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA 191
N + P S + S S D++VRLW + + C+ F GH + V SV F+P D +A
Sbjct: 1204 NSVVFNP-DGSTLASGSSDQTVRLWEINSSKCLCTFQ---GHTSWVNSVVFNP-DGSMLA 1258
Query: 192 SCGMDNTVKIWSM 204
S D TV++W +
Sbjct: 1259 SGSSDKTVRLWDI 1271
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L +G + +R+ D+S+ + F GH + + L S++ + S D++VRLW++
Sbjct: 962 MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDIS 1020
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
+ C IF GH + V SV F SD +AS D TV++W +
Sbjct: 1021 SSQCFYIFQ---GHTSCVRSVVF-SSDGAMLASGSDDQTVRLWDI 1061
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRL 155
DG L +G + +R+ D+S+ + GH + + P +++ S D+ VRL
Sbjct: 1043 DG-AMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRL 1100
Query: 156 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
W++ +G C+ G+ + V + F P+ + +A+ D V++W +
Sbjct: 1101 WDISSGNCLYTLQ---GYTSWVRFLVFSPNGV-TLANGSSDQIVRLWDI 1145
Score = 38.5 bits (88), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWN 157
L +G + +R+ ++S+ + + GH IN +R+ ++ S S DE+++LW+
Sbjct: 1424 LLASGSDDQTVRLWNISSGECLYTLHGH---INSVRSVAFSSDGLILASGSDDETIKLWD 1480
Query: 158 VQTGICI 164
V+TG CI
Sbjct: 1481 VKTGECI 1487
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P P V+S+S D ++LW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWD 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G +C IF G H + V+ V F+P D AS +D T KIWS+
Sbjct: 130 KGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTTKIWSL 172
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +I+ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPELP-IIITGSEDGTVRIWHS 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + +GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ CI + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCISVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
Query: 69 GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--SFVG 126
G + A+ YV E + V+WA +P +V+G + +++ ++ K + + G
Sbjct: 190 GGVDAIVKYVLEGHDRG---VNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRG 246
Query: 127 HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD 186
H ++++ + K ++VS S+D+S+R+W+ I F R +L+V HP
Sbjct: 247 HMNNVSSVMFHA-KQDIIVSNSEDKSIRVWDATKRTGIQTFRREHD-RFWILAV--HPE- 301
Query: 187 IYRIASCGMDNTVKIWSMKE 206
+ + G DN + ++ ++
Sbjct: 302 -INLLAAGHDNGMIVFKLER 320
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWE 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 130 KGWACTQIFEG---HSHYVMQVTFNPKDTNTFASASLDRTIKIWNL 172
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 39/225 (17%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V + +++ +V K+ K+ GH + + P + SLVVS S DESVR+W+V+T
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNP-QSSLVVSGSFDESVRIWDVRT 194
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 220
G+C+ H + V +V F+ D I S D V+IW K+ +
Sbjct: 195 GMCVKTLP---AHSDPVSAVSFN-RDGSLITSGSYDGLVRIWDTAN--GQCVKTLVDDEN 248
Query: 221 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 280
P P +V+F G +ILS ++DN + LW+ G
Sbjct: 249 P---PVAFVKFSPN---------------GKYILSSNLDNTLKLWD---------FGKGK 281
Query: 281 ILQKYPVPECDIWFIKFSCDFHYNAAA---IGNREGKIFVWELQS 322
L++Y E + + I F+ +F G+ + KI+VW LQ+
Sbjct: 282 TLKQYQGHENNKYCI-FA-NFSVTGGKWIISGSEDCKIYVWNLQT 324
>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2
Length = 1322
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVS 146
+ V W+ +GI L +G +G +R+ D + + GH + + P L++S
Sbjct: 570 FHVKWSPLREGI--LCSGSDDGTVRIWDYTQDACINILNGHTAPVRGLMWNTEIPYLLIS 627
Query: 147 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
S D ++++W+ + G C+ G +V + HPS + +ASC D+TV++WS+
Sbjct: 628 GSWDYTIKVWDTREGTCVDTVYDHGA---DVYGLTCHPSRPFTMASCSRDSTVRLWSLTA 684
Query: 207 FWTYVE 212
T V+
Sbjct: 685 LVTPVQ 690
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 125 VGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 184
+GH ++I + + +P P+L+ +AS D ++++W++ T + G G + S+ + P
Sbjct: 390 LGHVETIFDCKFKPDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEG---VIYSLSWAP 446
Query: 185 SDIYRIASCGMDNTVKIWSMKE 206
+ IA N IW++++
Sbjct: 447 GGLNCIAGGTSRNGAFIWNVQK 468
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESV 153
DG F+ A + ++V +K S H IN +R P L+VSAS D++V
Sbjct: 114 DGQSFVTASD-DKTVKVWSTHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDDKTV 169
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 170 KLWDKTSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 218
+ + H V SV F SD + D TVK+WS
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSFVTASDDKTVKVWSTHR------------ 134
Query: 219 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 271
KF +F S H N+V C ++ G I+S S D + LW+ +E
Sbjct: 135 ---QKF--------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 26/104 (25%)
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 231
GHR+ V SVDF + ++AS MD+ + +W MK Q
Sbjct: 17 GHRDAVTSVDF-SLNTKQLASGSMDSCLMVWHMKP-----------------------QT 52
Query: 232 PVFIASVHSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQS 273
+ + H + V C + G + S S D + +W P +K +S
Sbjct: 53 RAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES 96
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E++ Y+VS++ + I +GG + I++ S+ L K+ GH ++N + P +
Sbjct: 1113 EDAVYSVSFSPDGQTI---ASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKN 1169
Query: 143 LVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
L SAS D S++LW+ +G ++ GH V++V F P D IA+ D TVK+W
Sbjct: 1170 LA-SASSDHSIKLWDTTSGQLLMTLT---GHSAGVITVRFSP-DGQTIAAGSEDKTVKLW 1224
Query: 203 SMKE 206
++
Sbjct: 1225 HRQD 1228
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 32 GKRPLYAVVFNFIDSRYFNVFATVGGN-RVTVYQCLEGGVIAALQSYVDEDKEESFYTVS 90
G +YAV F S + AT G + + ++ +G ++ L ++ Y +S
Sbjct: 1362 GNSGVYAVSFLHDGS----IIATAGADGNIQLWHSQDGSLLKTLPG------NKAIYGIS 1411
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKD 150
+ D + + + +++ V + K K+ +GH + +N++ P +L SAS+D
Sbjct: 1412 FTPQGD---LIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLA-SASRD 1467
Query: 151 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
+V+LWNV G GH +EV V F P D IAS D T+++W
Sbjct: 1468 NTVKLWNVSDGKFKKTLK---GHTDEVFWVSFSP-DGKIIASASADKTIRLW 1515
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 31/168 (18%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ AG + +++ + KL K+ GH D +N + P +L SAS D++++LW +
Sbjct: 1212 IAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLA-SASADKTIKLWRIAD 1270
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 220
G + G H + V V+F SD IAS DNT+K+W+
Sbjct: 1271 GKLVKTLKG---HNDSVWDVNF-SSDGKAIASASRDNTIKLWNRHG-------------- 1312
Query: 221 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGD--FILSKSVDNEIVLWE 266
++ F HS V +L D I S S+DN I LW+
Sbjct: 1313 --------IELETFTG--HSGGVYAVNFLPDSNIIASASLDNTIRLWQ 1350
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
Query: 58 NRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN 117
N V ++ +G L+ + DE V W + + + IR+ D +
Sbjct: 1468 NTVKLWNVSDGKFKKTLKGHTDE--------VFWVSFSPDGKIIASASADKTIRLWDSFS 1519
Query: 118 EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEV 177
L KS H D + + P S++ S S D++V+LW G + F+ GH N V
Sbjct: 1520 GNLIKSLPAHNDLVYSVNFNP-DGSMLASTSADKTVKLWRSHDGHLLHTFS---GHSNVV 1575
Query: 178 LSVDFHPSDIYRIASCGMDNTVKIWSM 204
S F P Y IAS D TVKIW +
Sbjct: 1576 YSSSFSPDGRY-IASASEDKTVKIWQI 1601
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+ G +G I++ + L K+ G+ +I I P + L+ SA+ D++V++W V+
Sbjct: 1377 IIATAGADGNIQLWHSQDGSLLKTLPGN-KAIYGISFTP-QGDLIASANADKTVKIWRVR 1434
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 206
G + GH NEV V+F P D +AS DNTVK+W++ +
Sbjct: 1435 DGKALKTLI---GHDNEVNKVNFSP-DGKTLASASRDNTVKLWNVSD 1477
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 20/200 (10%)
Query: 15 LTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
L K ++ + N+L++ +R + A+ I S F A G + IAAL
Sbjct: 957 LAERKHQQLQAKNRLKQAQRAVVALSVLGIASVSFGGLAYWQGREAQFRE------IAAL 1010
Query: 75 QSYVDED---KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-----HKSFVG 126
S + ++ ++ + ++A N + + + L G
Sbjct: 1011 NSSSQANLLSHQQLAALIASLKAAQQVNHVIAVPNNLKLATVTTLQQALFEMQERNRLEG 1070
Query: 127 HGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD 186
H D + I + S S D++++LW+ +F GH + V SV F P D
Sbjct: 1071 HKDGVISISISR-DGQTIASGSLDKTIKLWSRDG----RLFRTLNGHEDAVYSVSFSP-D 1124
Query: 187 IYRIASCGMDNTVKIWSMKE 206
IAS G D T+K+W +
Sbjct: 1125 GQTIASGGSDKTIKLWQTSD 1144
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 51 VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109
+ A+ ++ + ++ G +I +L ++ D Y+V++ N DG L + +
Sbjct: 1502 IIASASADKTIRLWDSFSGNLIKSLPAHND-----LVYSVNF--NPDG-SMLASTSADKT 1553
Query: 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAG 169
+++ + L +F GH + + P + SAS+D++V++W + + +
Sbjct: 1554 VKLWRSHDGHLLHTFSGHSNVVYSSSFSP-DGRYIASASEDKTVKIWQIDGHLLTTLPQ- 1611
Query: 170 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 202
H+ V+S F P D + S +D T KIW
Sbjct: 1612 ---HQAGVMSAIFSP-DGKTLISGSLDTTTKIW 1640
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 181
++F GH + + P +++ SAS D ++RLW + + AG G V +V
Sbjct: 1316 ETFTGHSGGVYAVNFLP-DSNIIASASLDNTIRLWQRPLISPLEVLAGNSG----VYAVS 1370
Query: 182 F-HPSDIYRIASCGMDNTVKIWSMKE 206
F H I IA+ G D +++W ++
Sbjct: 1371 FLHDGSI--IATAGADGNIQLWHSQD 1394
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++VAG + IRV + + K F H D I + P P V+S+S D ++LW+ +
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDWE 129
Query: 160 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G C IF G H + V+ V F+P D AS +D T+KIW++
Sbjct: 130 NGWACTQIFEG---HSHYVMQVVFNPKDTNTFASASLDRTIKIWNL 172
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P+L+ G + +V D + ++ GH +++ + P P ++++ S+D +VR+W+
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELP-IIITGSEDGTVRIWHA 258
Query: 159 QT 160
T
Sbjct: 259 TT 260
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESV 153
DG F+ A + ++V +K S H IN +R P L+VSAS D++V
Sbjct: 114 DGQSFVTASD-DKTVKVWATHRQKFLFSLSQH---INWVRCAKFSPDGRLIVSASDDKTV 169
Query: 154 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+LW+ + C+ + GG V VDFHPS IA+ GMDNTVK+W ++
Sbjct: 170 KLWDKSSRECVHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDVR 217
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 34/175 (19%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + V + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 218
+ + H V SV F SD + D TVK+W+
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSFVTASDDKTVKVWATHR------------ 134
Query: 219 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 271
KF +F S H N+V C ++ G I+S S D + LW+ +E
Sbjct: 135 ---QKF--------LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRE 178
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNV 158
LV + ++V ++ S H IN +R P L+VSAS D++V+LW+
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQH---INWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ CI + GG V VDFHPS IA+ GMDNTVK+W +
Sbjct: 175 TSRECIHSYCEHGGF---VTYVDFHPSGTC-IAAAGMDNTVKVWDAR 217
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLW--NV 158
L +G ++ + + + + F GH D++ + P L+ S S+D++VR+W NV
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP-SGHLLASGSRDKTVRIWVPNV 92
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 218
+ + H V SV F SD + + D TVK+WS
Sbjct: 93 KGESTVF-----RAHTATVRSVHF-CSDGQSLVTASDDKTVKVWST-------------- 132
Query: 219 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 271
+ Q +F + H N+V C ++ G I+S S D + LW+ +E
Sbjct: 133 ---------HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 26/104 (25%)
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 231
GHR+ V VDF + +AS MD+T+ IW MK Q
Sbjct: 17 GHRDAVTCVDF-SLNTKHLASGSMDSTLMIWHMKP-----------------------QS 52
Query: 232 PVFIASVHSNYVDCNRW--LGDFILSKSVDNEIVLWEPKMKEQS 273
+ + H + V C + G + S S D + +W P +K +S
Sbjct: 53 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGES 96
>sp|Q75BY3|PRP46_ASHGO Pre-mRNA-splicing factor PRP46 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PRP46
PE=3 SV=2
Length = 425
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 50 NVFATVGGNRVT--VYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN 107
N + G N T V+ G + LQ ++ TV C P++ + +
Sbjct: 126 NAWFATGSNDSTIRVWDLATGKLKVTLQGHI--------MTVRDICISARHPYMFSASQD 177
Query: 108 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSL--VVSASKDESVRLWNVQTGICIL 165
+++ D+ + + F G +++ + + L PSL +VSA +D VR+W++++ C+L
Sbjct: 178 KLVKCWDLERNTVVRDFHG---TLSGVHSVDLHPSLDLIVSAGRDSVVRVWDIRSRSCVL 234
Query: 166 IFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
AG G N+V + P +I SC D TVK+W +
Sbjct: 235 TLAGHRGPINKVRCLPVDP----QIVSCSTDATVKLWDL 269
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 88 TVSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV 144
T+S +VD P +V+ G + ++RV D+ + + GH IN++R P+ P +
Sbjct: 197 TLSGVHSVDLHPSLDLIVSAGRDSVVRVWDIRSRSCVLTLAGHRGPINKVRCLPVDPQ-I 255
Query: 145 VSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
VS S D +V+LW++ G + H+ V + F+P++ ++C D ++ W +
Sbjct: 256 VSCSTDATVKLWDLVAGKPMKTLT---HHKRNVRDLAFNPTEFSFASACTDD--IRSWKL 310
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+ G + IRV D++ KL + GH ++ +I P + SAS+D+ V+ W+++
Sbjct: 128 WFATGSNDSTIRVWDLATGKLKVTLQGHIMTVRDICISARHPYMF-SASQDKLVKCWDLE 186
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ F G + V SVD HPS + I S G D+ V++W ++
Sbjct: 187 RNTVVRDFHGT---LSGVHSVDLHPS-LDLIVSAGRDSVVRVWDIR 228
>sp|P93107|PF20_CHLRE Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas
reinhardtii GN=PF20 PE=2 SV=1
Length = 606
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 179
L+K+F GH S+ + P KP L V+AS D++ ++W++ G I+ GH++ V
Sbjct: 318 LNKTFKGHLLSVANLALHPTKPIL-VTASDDKTWKMWHMPGGDLIMC---GEGHKDWVAG 373
Query: 180 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 239
VDFHP+ +AS G D+ VKIW ++ + T + I SV
Sbjct: 374 VDFHPAGTC-LASGGGDSAVKIWDFEK---------------QRCVTTFTDHKQAIWSVR 417
Query: 240 SNYVDCNRWLGDFILSKSVDNEIVLWE 266
++ LG+ + S S+D+ + LW+
Sbjct: 418 FHH------LGEVVASGSLDHTVRLWD 438
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+ +G ++ +R+ D+ K + GH DS+N++ QP SL +AS D++V +W+ +
Sbjct: 425 VASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSSL-ATASSDKTVSVWDARA 483
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G+C + GH+N V F+ ++AS D VK+W +
Sbjct: 484 GLCTQTYY---GHQNSCNGVSFNILGT-QLASTDADGVVKLWDTR 524
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 91 WACNVDGIPF---LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA 147
W VD P L +GG + +++ D ++ +F H +I +R L +V S
Sbjct: 370 WVAGVDFHPAGTCLASGGGDSAVKIWDFEKQRCVTTFTDHKQAIWSVRFHHLG-EVVASG 428
Query: 148 SKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
S D +VRLW++ G C + G N++ F S +A+ D TV +W +
Sbjct: 429 SLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSS----LATASSDKTVSVWDAR 482
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 147 ASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWS 203
A D V+ ++ G+ + A GH + V +V F P+ Y + SCG DNT ++WS
Sbjct: 554 ACDDGKVKAYSTTDGV---LQAELAGHEDAVQAVLFDPAGQY-LVSCGSDNTFRLWS 606
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 44/242 (18%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
FL G + +IR+ D+ N K+ GH I + P LV S S D +VR+W+++
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLR 515
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 219
TG C L + G V +V P D IA+ +D V++W E F
Sbjct: 516 TGQCSLTLSIEDG----VTTVAVSPGDGKYIAAGSLDRAVRVWDS-------ETGFLVER 564
Query: 220 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLW-----EPKMKEQSP 274
L S+ + + V + G ++S S+D + LW K ++P
Sbjct: 565 LDSENESGTGHKDSVYSVVFTRD-------GQSVVSGSLDRSVKLWNLQNANNKSDSKTP 617
Query: 275 GEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--------GNREGKIFVWELQSSPPV 326
GT C++ +I DF + A G+++ + W+ +S P+
Sbjct: 618 NSGT-----------CEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 665
Query: 327 LI 328
L+
Sbjct: 666 LM 667
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 18/190 (9%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E+ Y++ + + D LV+G + +R+ D+ + + D + + P
Sbjct: 485 EQDIYSLDYFPSGDK---LVSGSGDRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGK 540
Query: 143 LVVSASKDESVRLWNVQTGICILIF----AGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 198
+ + S D +VR+W+ +TG + GH++ V SV F D + S +D +
Sbjct: 541 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVSGSLDRS 599
Query: 199 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV 258
VK+W+++ KS + T Y+ F+ SV + D ++ILS S
Sbjct: 600 VKLWNLQNANN---KSDSKTPNSGTCEVTYIGHKDFVLSVATTQND------EYILSGSK 650
Query: 259 DNEIVLWEPK 268
D ++ W+ K
Sbjct: 651 DRGVLFWDKK 660
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 123 SFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSV 180
+++GH D + + T ++S SKD V W+ ++G +L+ GHRN V+SV
Sbjct: 625 TYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVISV 678
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVAVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 66 LEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--S 123
L GGV A ++ YV E + V+WA +P +V+G + +++ +++ K + +
Sbjct: 188 LFGGVDAVVK-YVLEGHDRG---VNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDT 243
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QTGI 162
GH ++++ + K ++VS S+D+S+R+W+ +TGI
Sbjct: 244 LRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRIWDATKRTGI 283
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVAVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 66 LEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--S 123
L GGV A ++ YV E + V+WA +P +V+G + +++ +++ K + +
Sbjct: 188 LFGGVDAVVK-YVLEGHDRG---VNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDT 243
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QTGI 162
GH ++++ + K ++VS S+D+S+R+W+ +TGI
Sbjct: 244 LRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRVWDATKRTGI 283
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 220
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS----------------- 389
Query: 221 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 280
T +F V + H + C ++ ++S S DN I LW+ +
Sbjct: 390 -----TSTCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE---------CGA 434
Query: 281 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS-PPVLIARLICFSLHVK 339
L+ E + I+F G +GKI VW+LQ++ P A +C V+
Sbjct: 435 CLRVLEGHEELVRCIRFD----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE 490
Query: 340 YN 341
++
Sbjct: 491 HS 492
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++V+ + I+V S + ++ GH I ++ + LVVS S D ++RLW+++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIE 431
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G C+ + GH V + F D RI S D +K+W ++
Sbjct: 432 CGACLRVLE---GHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQ 471
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V G + +RV DV+ ++ + + H +++ +R L+V+ SKD S+ +W++ +
Sbjct: 293 IVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLR---FSNGLMVTCSKDRSIAVWDMAS 349
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 220
I + GHR V VDF D Y +++ G D T+K+WS
Sbjct: 350 ATDITLRRVLVGHRAAVNVVDF--DDKYIVSASG-DRTIKVWS----------------- 389
Query: 221 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTAD 280
T +F V + H + C ++ ++S S DN I LW+ +
Sbjct: 390 -----TSTCEF-VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE---------CGA 434
Query: 281 ILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS-PPVLIARLICFSLHVK 339
L+ E + I+F G +GKI VW+LQ++ P A +C V+
Sbjct: 435 CLRVLEGHEELVRCIRFD----NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVE 490
Query: 340 YN 341
++
Sbjct: 491 HS 492
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
++V+ + I+V S + ++ GH I ++ + LVVS S D ++RLW+++
Sbjct: 375 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---YRDRLVVSGSSDNTIRLWDIE 431
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
G C+ + GH V + F D RI S D +K+W ++
Sbjct: 432 CGACLRVLE---GHEELVRCIRF---DNKRIVSGAYDGKIKVWDLQ 471
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + I+V + + + GH D I ++ P +VSAS D+++R+WN
Sbjct: 64 PLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIRTVQFHHECP-WIVSASDDQTIRIWNW 122
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ C+ + GH + V+ FHP + + S +D TV++W +
Sbjct: 123 QSRTCVAVLT---GHNHYVMCASFHPKEDL-VVSASLDQTVRVWDI 164
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 66 LEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK--S 123
L GGV A ++ YV E + V+WA +P +V+G + +++ +++ K + +
Sbjct: 188 LFGGVDAVVK-YVLEGHDRG---VNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDT 243
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV--QTGI 162
GH ++++ + K ++VS S+D+S+R+W+ +TGI
Sbjct: 244 LRGHMNNVSCVMFHA-KQDIIVSNSEDKSIRIWDATKRTGI 283
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNV 158
P V+GG + + V + + KL S GH D + P ++S S D+++R+WN
Sbjct: 66 PLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYP-WILSCSDDQTIRIWNW 124
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
Q+ CI I GH + V+ FHPS+ I S +D TV++W +
Sbjct: 125 QSRNCIAILT---GHSHYVMCAAFHPSEDL-IVSASLDQTVRVWDI 166
>sp|Q5R650|WDR37_PONAB WD repeat-containing protein 37 OS=Pongo abelii GN=WDR37 PE=2 SV=1
Length = 495
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 179 SVDFHPSDIYRIASCGMDNTVKIW 202
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 171
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 310 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 365
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
GH + V S F D + S D TVK+W +K
Sbjct: 366 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 399
>sp|Q9Y2I8|WDR37_HUMAN WD repeat-containing protein 37 OS=Homo sapiens GN=WDR37 PE=2 SV=2
Length = 494
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 179 SVDFHPSDIYRIASCGMDNTVKIW 202
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 171
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 309 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 364
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
GH + V S F D + S D TVK+W +K
Sbjct: 365 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 398
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 128/333 (38%), Gaps = 64/333 (19%)
Query: 14 SLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAA 73
SLTP+K R + + L+E + + +D R V ++ G+ VY+C +
Sbjct: 405 SLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNL 464
Query: 74 LQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
L S ++ + ++W+C V ++ GH + +
Sbjct: 465 LLSCSEDSTIRLWSLLTWSCVV---------------------------TYRGHVYPVWD 497
Query: 134 IRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 193
+R P VS S D++ RLW + + +F GH ++V V FHP+ Y +A+
Sbjct: 498 VRFAP-HGYYFVSCSYDKTARLWATDSNQALRVFV---GHLSDVDCVQFHPNSNY-VATG 552
Query: 194 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 253
D TV++W T + T + +A + C R+L
Sbjct: 553 SSDRTVRLWD------------NMTGQSVRLMTGHKGSVSSLA-----FSACGRYLA--- 592
Query: 254 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 313
S SVD+ I++W+ S G +L+ + I FS D AAA +
Sbjct: 593 -SGSVDHNIIIWDL-----SNGSLVTTLLRHTST----VTTITFSRDGTVLAAA--GLDN 640
Query: 314 KIFVWELQSSPPVLIARLICFSLHVKYNPQSVY 346
+ +W+ I+ I S H N + VY
Sbjct: 641 NLTLWDFHKVTEDYISNHITVSHHQDENDEDVY 673
>sp|D3BUN1|LIS1_POLPA Lissencephaly-1 homolog OS=Polysphondylium pallidum PE=3 SV=1
Length = 417
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 183
GH + IN +R PL S++VSAS+D ++R+W+ +G GH N V +DF
Sbjct: 100 LTGHRNCINAVRFHPL-FSVIVSASEDATMRIWDFDSGDFERTLK---GHTNAVQDIDFD 155
Query: 184 PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 243
S +ASC D T+K+W + F + H + V
Sbjct: 156 KSGNL-LASCSADLTIKLWDFQSF-----------------------DCIKTLHGHDHNV 191
Query: 244 DCNRWL--GDFILSKSVDNEIVLWE 266
C R+L GD ++S S D I +WE
Sbjct: 192 SCVRFLPSGDQLVSSSRDKSIKVWE 216
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
+L G + I++ +++ + ++++GH + + I+ P L+ S D+S+R+W++
Sbjct: 316 YLATGSRDKTIKIWELATGRCLQTYIGHDNWVRSIKFHPCGKYLI-SVGDDKSIRVWDIA 374
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
G CI A H + + +DF + + IA+ G+D+ +KIW +
Sbjct: 375 QGRCIKTINEA--HSHFISCLDFCSHNPH-IATGGVDDIIKIWKL 416
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ 159
L + + I++ D + K+ GH +++ +R P LV S+S+D+S+++W
Sbjct: 160 LLASCSADLTIKLWDFQSFDCIKTLHGHDHNVSCVRFLPSGDQLV-SSSRDKSIKVWETA 218
Query: 160 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 204
TG C GH + V V D +ASC D T ++W++
Sbjct: 219 TGYCTKTLT---GHEDWVRKV-IVSEDGTTLASCSNDQTARVWNL 259
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQT 160
+V+ + +R+ D + ++ GH +++ +I +L+ S S D +++LW+ Q+
Sbjct: 119 IVSASEDATMRIWDFDSGDFERTLKGHTNAVQDIDFDK-SGNLLASCSADLTIKLWDFQS 177
Query: 161 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 216
CI GH + V V F PS ++ S D ++K+W Y K+ T
Sbjct: 178 FDCIKTLH---GHDHNVSCVRFLPSG-DQLVSSSRDKSIKVWETAT--GYCTKTLT 227
>sp|Q8CBE3|WDR37_MOUSE WD repeat-containing protein 37 OS=Mus musculus GN=Wdr37 PE=2 SV=1
Length = 496
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 119 KLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVL 178
+L K ++GH D I ++ +P ++ +AS D + LW+++TG C++ +A GH V
Sbjct: 147 QLVKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYA---GHVGSVN 203
Query: 179 SVDFHPSDIYRIASCGMDNTVKIW 202
S+ FHPS+ + + G D T IW
Sbjct: 204 SIKFHPSEQLALTASG-DQTAHIW 226
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQ--TGICILIFAGAG 171
DV +L S GH + T P + LVV++S+D + RLW+ + + + +F
Sbjct: 311 DVETSELVHSLTGHDQELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQ--- 366
Query: 172 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 207
GH + V S F D + S D TVK+W +K
Sbjct: 367 GHTDTVTSAVFTVGD--NVVSGSDDRTVKVWDLKNM 400
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKDESVRLWNVQTGICILIFAGAGGHRNEVLS 179
L + F GH D++ + P L S S D + +WN++ + F G H++ +LS
Sbjct: 10 LERHFKGHRDTVTTVDFNPNTKQLA-SGSMDSCLMIWNMKPQMRAYRFVG---HKDAILS 65
Query: 180 VDFHPSDIYRIASCGMDNTVKIW--SMKEFWTYVEKSFTWT------------------D 219
VDF PS + IAS D TV++W S+K T V K+ T T D
Sbjct: 66 VDFSPSG-HLIASASRDKTVRLWVPSVKGEST-VFKAHTGTVRSVSFSGDGQSLVTASDD 123
Query: 220 LPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKE 271
K T + Q +F + H N+V C ++ G I+S S D I LW+ +E
Sbjct: 124 KTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASDDKTIKLWDKTSRE 177
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS--LVVSASKDESVRLWNV 158
LV + I+V V +K S H IN +R P L+VSAS D++++LW+
Sbjct: 117 LVTASDDKTIKVWTVHRQKFLFSLNQH---INWVRCAKFSPDGRLIVSASDDKTIKLWDK 173
Query: 159 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 205
+ CI F GG N VDFHPS IA+ DNTVK+W ++
Sbjct: 174 TSRECIHSFCEHGGFVN---FVDFHPSGTC-IAAAATDNTVKVWDIR 216
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLP---AHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-- 202
Query: 209 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
K+ D P P +V+F G +IL+ ++DN + LW+
Sbjct: 203 GQCLKTLIDDDNP---PVSFVKFSPN---------------GKYILAATLDNTLKLWD 242
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLP---AHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-- 202
Query: 209 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
K+ D P P +V+F G +IL+ ++DN + LW+
Sbjct: 203 GQCLKTLIDDDNP---PVSFVKFSPN---------------GKYILAATLDNTLKLWD 242
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 28/178 (15%)
Query: 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148
V+W+ + + LV+ + +++ DVS+ K K+ GH + + P + +L+VS S
Sbjct: 93 VAWSSDSN---LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGS 148
Query: 149 KDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 208
DESVR+W+V+TG C+ H + V +V F+ D I S D +IW
Sbjct: 149 FDESVRIWDVKTGKCLKTLP---AHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-- 202
Query: 209 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWE 266
K+ D P P +V+F G +IL+ ++DN + LW+
Sbjct: 203 GQCLKTLIDDDNP---PVSFVKFSPN---------------GKYILAATLDNTLKLWD 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,098,720
Number of Sequences: 539616
Number of extensions: 5698437
Number of successful extensions: 18348
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 773
Number of HSP's that attempted gapping in prelim test: 13186
Number of HSP's gapped (non-prelim): 4238
length of query: 346
length of database: 191,569,459
effective HSP length: 118
effective length of query: 228
effective length of database: 127,894,771
effective search space: 29160007788
effective search space used: 29160007788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)