Query 019120
Match_columns 346
No_of_seqs 81 out of 83
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 11:13:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t98_B Nucleoporin NUP58/NUP45 100.0 1.5E-28 5.1E-33 200.5 9.3 88 83-175 4-92 (93)
2 3zbh_A ESXA; unknown function, 87.8 3 0.0001 31.3 8.3 83 83-169 8-90 (99)
3 3fav_B ESAT-6, 6 kDa early sec 86.5 4.3 0.00015 30.6 8.5 77 89-169 10-86 (94)
4 3ghg_A Fibrinogen alpha chain; 85.6 19 0.00064 37.4 15.0 25 5-29 63-87 (562)
5 3uul_A Utrophin; spectrin repe 85.3 7.3 0.00025 29.8 9.5 25 93-117 4-28 (118)
6 4ioe_A Secreted protein ESXB; 83.3 12 0.00041 27.8 9.8 80 84-167 9-88 (93)
7 3uun_A Dystrophin; triple heli 82.9 8.4 0.00029 29.3 8.9 25 93-117 4-28 (119)
8 2vs0_A Virulence factor ESXA; 82.4 7.4 0.00025 29.0 8.2 78 87-168 9-86 (97)
9 2odv_A Plectin 1, HD1; plakin 82.3 7.6 0.00026 35.5 9.7 27 89-115 126-152 (235)
10 3fav_A ESAT-6-like protein ESX 82.1 9 0.00031 29.4 8.8 76 89-168 12-87 (101)
11 3rip_A Gamma-tubulin complex c 82.1 9.9 0.00034 38.9 11.5 31 86-116 83-113 (677)
12 3f1i_H Hepatocyte growth facto 82.0 4.5 0.00015 33.3 7.2 50 97-147 3-53 (98)
13 2dnx_A Syntaxin-12; snare, HAB 81.7 8.6 0.00029 32.0 9.1 65 89-163 12-76 (130)
14 2q12_A DIP13 alpha, DCC-intera 79.7 10 0.00034 34.1 9.5 31 84-114 14-44 (265)
15 3htk_C E3 SUMO-protein ligase 78.6 9.6 0.00033 36.1 9.3 78 86-168 19-97 (267)
16 3a7p_A Autophagy protein 16; c 76.5 15 0.00051 32.3 9.2 73 89-170 66-138 (152)
17 3h6p_C ESAT-6-like protein ESX 74.6 4.7 0.00016 30.8 5.0 78 89-170 11-88 (96)
18 3hd7_B Syntaxin-1A; membrane p 74.5 21 0.00072 28.9 9.1 61 99-168 15-75 (109)
19 3gwk_C SAG1039, putative uncha 74.0 20 0.00067 27.0 8.4 77 88-168 12-88 (98)
20 3tnu_B Keratin, type II cytosk 73.3 30 0.001 28.5 10.0 69 89-169 41-109 (129)
21 3ts9_A Interferon-induced heli 72.9 9 0.00031 33.2 6.8 74 101-184 36-115 (138)
22 2spc_A Spectrin; cytoskeleton; 72.7 13 0.00045 28.4 7.2 25 93-117 5-29 (107)
23 3tnu_A Keratin, type I cytoske 72.0 34 0.0012 28.3 10.0 70 88-169 42-111 (131)
24 4ev6_A Magnesium transport pro 71.3 22 0.00075 33.2 9.7 29 88-116 161-189 (339)
25 2lw1_A ABC transporter ATP-bin 71.1 32 0.0011 26.7 9.2 61 89-166 20-80 (89)
26 4egw_A Magnesium transport pro 70.6 34 0.0012 30.8 10.6 29 88-116 161-189 (280)
27 3oja_B Anopheles plasmodium-re 69.9 57 0.0019 31.9 12.7 37 131-167 505-541 (597)
28 3lay_A Zinc resistance-associa 69.2 38 0.0013 29.9 10.2 78 78-171 65-142 (175)
29 1m1j_B Fibrinogen beta chain; 69.0 17 0.00059 36.8 8.9 18 6-23 100-117 (464)
30 1u5p_A Spectrin alpha chain, b 68.2 21 0.00073 30.0 8.2 25 93-117 5-29 (216)
31 1sfc_B Protein (syntaxin 1A), 67.5 25 0.00086 27.0 7.8 62 100-170 16-77 (83)
32 1deq_A Fibrinogen (alpha chain 67.3 50 0.0017 32.9 11.6 19 6-24 67-85 (390)
33 3ghg_C Fibrinogen gamma chain; 67.3 6.6 0.00023 39.2 5.5 26 5-30 37-62 (411)
34 1jth_B Syntaxin 1A; coiled-coi 66.8 24 0.00082 26.6 7.4 62 100-170 5-66 (77)
35 3efg_A Protein SLYX homolog; x 66.7 14 0.00047 28.8 6.1 34 130-163 30-63 (78)
36 4h8s_A DCC-interacting protein 65.6 52 0.0018 31.2 11.2 29 85-113 38-66 (407)
37 3b5n_B Protein SSO1; snare com 64.1 35 0.0012 25.3 7.7 61 100-169 5-65 (69)
38 4i0x_B ESAT-6-like protein MAB 62.7 11 0.00036 29.5 4.8 81 86-168 13-93 (103)
39 1n7s_B Syntaxin 1A; neuronal s 61.9 27 0.00091 25.8 6.7 57 100-165 7-63 (68)
40 1s35_A Beta-I spectrin, spectr 61.4 39 0.0013 28.3 8.6 25 93-117 109-133 (214)
41 4i0x_A ESAT-6-like protein MAB 61.3 29 0.00098 26.6 7.0 77 88-168 4-80 (94)
42 2q13_A DCC-interacting protein 61.0 21 0.00071 33.7 7.4 75 85-159 15-108 (385)
43 4etp_A Kinesin-like protein KA 59.3 26 0.0009 34.2 8.0 37 132-168 7-43 (403)
44 1hci_A Alpha-actinin 2; triple 59.3 24 0.00081 33.5 7.5 26 91-116 131-156 (476)
45 1u4q_A Spectrin alpha chain, b 59.3 27 0.00093 31.1 7.5 25 93-117 5-29 (322)
46 3ajw_A Flagellar FLIJ protein; 59.2 60 0.002 26.2 9.0 36 135-170 74-109 (150)
47 2j1d_G DAAM1, disheveled-assoc 58.6 31 0.0011 34.3 8.5 74 94-175 295-368 (483)
48 4i0x_B ESAT-6-like protein MAB 58.4 51 0.0017 25.5 8.1 77 93-185 13-96 (103)
49 1quu_A Human skeletal muscle a 57.5 33 0.0011 30.0 7.7 29 89-117 12-40 (250)
50 3obv_E Protein diaphanous homo 57.4 48 0.0017 32.9 9.6 73 93-174 283-355 (457)
51 4etr_A Putative uncharacterize 56.1 33 0.0011 28.7 7.1 51 92-151 42-92 (153)
52 1cun_A Protein (alpha spectrin 56.1 52 0.0018 27.4 8.4 24 93-116 2-25 (213)
53 1l8d_A DNA double-strand break 55.8 72 0.0025 25.0 10.6 28 91-118 17-44 (112)
54 1wlq_A Geminin; coiled-coil; 2 55.7 23 0.00079 28.3 5.6 28 134-161 54-81 (83)
55 1cun_A Protein (alpha spectrin 55.6 50 0.0017 27.5 8.2 23 94-116 109-131 (213)
56 1ux5_A BNI1 protein; structura 54.9 75 0.0026 30.6 10.3 78 93-175 293-370 (411)
57 2bbh_A Divalent cation transpo 54.8 23 0.0008 31.3 6.3 29 88-116 176-204 (269)
58 1v9d_A Diaphanous protein homo 54.5 63 0.0021 30.4 9.5 72 93-173 212-283 (340)
59 2wvr_A Geminin; DNA replicatio 54.2 24 0.00082 32.4 6.3 76 75-164 86-161 (209)
60 1sjj_A Actinin; 3-helix bundle 53.9 39 0.0013 34.9 8.6 27 91-117 370-396 (863)
61 3nvo_A Zinc transport protein 53.5 1E+02 0.0036 27.0 10.3 29 88-116 152-180 (264)
62 1g8x_A Myosin II heavy chain f 53.2 14 0.00049 40.4 5.4 29 90-118 885-913 (1010)
63 3swy_A Cyclic nucleotide-gated 53.1 17 0.00059 26.0 4.1 26 89-114 21-46 (46)
64 1wfd_A Hypothetical protein 15 53.0 65 0.0022 25.2 7.9 32 87-118 17-53 (93)
65 2dl1_A Spartin; SPG20, MIT, st 53.0 48 0.0016 27.8 7.5 42 74-119 15-61 (116)
66 1zme_C Proline utilization tra 52.8 17 0.00057 26.0 4.2 24 92-115 45-68 (70)
67 1s94_A S-syntaxin; three helix 52.4 1.1E+02 0.0037 26.0 10.5 27 89-115 41-67 (180)
68 1sjj_A Actinin; 3-helix bundle 52.0 87 0.003 32.3 10.8 41 95-142 489-529 (863)
69 2fjc_A Antigen TPF1; mini ferr 51.1 1.1E+02 0.0036 25.5 11.7 105 8-160 11-126 (156)
70 2z90_A Starvation-inducible DN 51.0 1.1E+02 0.0037 25.6 10.6 74 88-161 48-132 (161)
71 4a5x_A MITD1, MIT domain-conta 50.8 62 0.0021 25.1 7.4 56 94-163 30-85 (86)
72 2iub_A CORA, divalent cation t 50.3 91 0.0031 29.3 9.9 28 89-116 186-213 (363)
73 1u5p_A Spectrin alpha chain, b 50.2 68 0.0023 26.9 8.2 24 93-116 111-134 (216)
74 3oja_A Leucine-rich immune mol 50.1 1.8E+02 0.0061 27.9 15.9 72 84-171 407-478 (487)
75 2iak_A Bullous pemphigoid anti 49.7 32 0.0011 29.8 6.3 26 93-118 22-47 (224)
76 3ghg_B Fibrinogen beta chain; 49.4 27 0.00094 35.4 6.4 23 5-27 94-116 (461)
77 2hn1_A CORA, magnesium and cob 49.3 56 0.0019 28.9 7.9 28 89-116 178-205 (266)
78 3zbh_A ESXA; unknown function, 49.3 43 0.0015 24.8 6.1 24 89-112 21-44 (99)
79 2ke4_A CDC42-interacting prote 49.0 38 0.0013 27.4 6.1 30 89-118 20-49 (98)
80 2p90_A Hypothetical protein CG 48.5 29 0.001 32.9 6.2 41 130-170 255-306 (319)
81 3tq2_A KE1; parallel three hel 48.3 21 0.00071 24.1 3.6 30 133-162 6-35 (36)
82 3nvo_A Zinc transport protein 48.0 1E+02 0.0035 27.1 9.3 16 100-115 157-172 (264)
83 3edu_A Beta-I spectrin, spectr 47.7 17 0.00057 31.2 4.0 22 93-114 110-131 (218)
84 3swf_A CGMP-gated cation chann 47.7 24 0.00082 27.7 4.5 27 89-115 23-49 (74)
85 2vs0_A Virulence factor ESXA; 47.5 37 0.0013 25.0 5.5 74 88-165 17-90 (97)
86 3gwk_C SAG1039, putative uncha 47.4 61 0.0021 24.2 6.8 69 89-161 20-88 (98)
87 1k1f_A Breakpoint cluster regi 47.3 19 0.00064 28.0 3.7 23 93-115 28-50 (72)
88 1gl2_B Syntaxin 7; membrane pr 47.1 36 0.0012 25.0 5.3 35 130-164 25-59 (65)
89 3rrk_A V-type ATPase 116 kDa s 46.9 87 0.003 29.0 9.1 72 88-164 57-128 (357)
90 2xgw_A Peroxide resistance pro 46.4 1.5E+02 0.0051 26.1 10.1 73 88-160 73-157 (199)
91 3tq2_A KE1; parallel three hel 45.7 15 0.00053 24.8 2.7 21 150-170 2-22 (36)
92 1vcs_A Vesicle transport throu 45.6 1.1E+02 0.0039 24.2 8.5 25 91-115 38-62 (102)
93 1deq_A Fibrinogen (alpha chain 45.5 43 0.0015 33.4 7.0 40 131-170 112-152 (390)
94 1ez3_A Syntaxin-1A; three heli 45.1 1.1E+02 0.0038 24.1 8.9 27 89-115 10-36 (127)
95 3e98_A GAF domain of unknown f 44.8 25 0.00086 32.2 5.0 81 22-147 32-112 (252)
96 3r6n_A Desmoplakin; spectrin r 44.7 76 0.0026 31.6 8.7 67 98-168 9-81 (450)
97 1lwu_C Fibrinogen gamma chain; 44.7 55 0.0019 31.5 7.5 15 148-162 39-53 (323)
98 3kbt_A Beta-I spectrin, spectr 44.5 70 0.0024 28.5 7.8 24 93-116 6-29 (326)
99 3u06_A Protein claret segregat 44.4 64 0.0022 31.7 8.1 22 94-115 6-27 (412)
100 2c2j_A DNA-binding stress resp 44.4 1.1E+02 0.0038 27.4 9.0 71 88-158 77-158 (211)
101 2yw6_A DNA protection during s 44.4 1.2E+02 0.004 26.1 9.0 70 88-157 46-126 (183)
102 1nkp_B MAX protein, MYC proto- 44.1 39 0.0013 25.7 5.2 31 88-118 51-81 (83)
103 2cpt_A SKD1 protein, vacuolar 43.9 1.3E+02 0.0045 24.6 9.5 23 95-117 33-55 (117)
104 2wlu_A DPS-like peroxide resis 43.9 1.5E+02 0.0052 25.2 10.1 73 88-160 57-141 (175)
105 3iq1_A DPS family protein; csg 43.9 1.4E+02 0.0048 24.8 10.5 73 89-161 49-131 (159)
106 1uii_A Geminin; human, DNA rep 43.9 51 0.0017 26.4 5.9 35 74-112 16-50 (83)
107 3f31_A Spectrin alpha chain, b 43.7 1.3E+02 0.0043 24.6 8.7 60 93-164 48-107 (149)
108 3edv_A Spectrin beta chain, br 43.4 47 0.0016 29.6 6.5 22 93-114 115-136 (323)
109 2c41_A DPS family DNA-binding 43.3 1.3E+02 0.0046 24.5 9.8 76 88-163 40-125 (158)
110 2v7k_A PRNB; IDO, TDO, biosynt 43.2 56 0.0019 31.8 7.4 103 70-188 228-348 (361)
111 1fio_A SSO1 protein; four heli 42.7 1.5E+02 0.0052 24.9 10.0 28 89-116 7-34 (196)
112 3ghg_A Fibrinogen alpha chain; 42.5 1.1E+02 0.0038 31.8 9.6 17 96-112 62-78 (562)
113 1wrd_A TOM1, target of MYB pro 42.5 1.3E+02 0.0044 24.1 8.8 78 93-170 8-94 (103)
114 2b0h_A Talin-1; vinculin, heli 42.4 1.6E+02 0.0055 25.1 10.9 82 92-181 13-111 (137)
115 2d4x_A Flagellar HOOK-associat 41.7 67 0.0023 28.5 7.1 75 97-180 18-99 (248)
116 2d0t_A Indoleamine 2,3-dioxyge 41.5 38 0.0013 33.3 6.0 42 70-113 271-316 (406)
117 2kvp_A Talin-1; VBS, vinculin, 41.4 1.6E+02 0.0054 25.9 9.3 53 93-153 42-94 (165)
118 3pdy_A Plectin; cytoskeleton, 41.3 1.3E+02 0.0045 25.8 8.8 69 98-170 12-95 (210)
119 1dkg_A Nucleotide exchange fac 40.2 58 0.002 29.1 6.4 51 129-179 91-149 (197)
120 1m1j_C Fibrinogen gamma chain; 40.0 1.1E+02 0.0038 30.3 9.0 25 6-30 38-62 (409)
121 2jee_A YIIU; FTSZ, septum, coi 39.9 1.4E+02 0.0047 23.7 10.5 64 91-170 6-69 (81)
122 3edv_A Spectrin beta chain, br 39.5 2E+02 0.0069 25.5 12.0 24 92-115 7-30 (323)
123 1hci_A Alpha-actinin 2; triple 39.1 1.8E+02 0.006 27.4 10.0 87 94-193 370-456 (476)
124 3lbx_A Spectrin alpha chain, e 39.1 1.7E+02 0.0057 24.3 9.9 59 93-163 58-116 (161)
125 3ck6_A Putative membrane trans 39.0 79 0.0027 27.7 7.1 25 89-113 142-166 (252)
126 4ioe_A Secreted protein ESXB; 38.9 91 0.0031 22.9 6.5 22 94-115 12-33 (93)
127 3edu_A Beta-I spectrin, spectr 38.8 1.8E+02 0.0061 24.6 9.4 24 93-116 3-26 (218)
128 1tjo_A Iron-rich DPSA-homolog 38.7 1.8E+02 0.0062 24.7 9.7 74 88-161 59-143 (182)
129 2v71_A Nuclear distribution pr 38.6 1.1E+02 0.0036 27.6 7.9 11 95-105 28-38 (189)
130 1l8d_A DNA double-strand break 38.2 1.1E+02 0.0037 23.9 7.2 70 90-163 23-92 (112)
131 1s94_A S-syntaxin; three helix 38.1 66 0.0022 27.3 6.3 23 93-115 38-60 (180)
132 2qyw_A Vesicle transport throu 38.0 1.4E+02 0.0048 23.7 7.8 23 94-116 15-37 (102)
133 1o9r_A Agrobacterium tumefacie 38.0 1.7E+02 0.0059 24.2 12.4 105 8-160 15-130 (162)
134 3viq_B Mating-type switching p 37.8 44 0.0015 26.7 4.7 47 94-143 4-50 (85)
135 2iub_A CORA, divalent cation t 37.8 1.7E+02 0.0057 27.5 9.6 38 131-168 257-294 (363)
136 3hnw_A Uncharacterized protein 37.1 1.9E+02 0.0065 24.4 10.6 28 77-105 19-46 (138)
137 2v6x_A Vacuolar protein sortin 36.9 1.3E+02 0.0046 22.6 8.2 24 95-118 28-51 (85)
138 3thf_A Protein shroom; coiled- 36.9 2E+02 0.0068 26.1 9.3 16 100-115 65-80 (190)
139 1io1_A Phase 1 flagellin; beta 36.8 66 0.0023 31.3 6.8 73 98-179 6-85 (398)
140 1u4q_A Spectrin alpha chain, b 36.7 1.4E+02 0.005 26.3 8.6 25 93-117 111-135 (322)
141 3eab_A Spastin; spastin, MIT, 36.5 1.6E+02 0.0056 23.5 8.3 20 100-119 39-58 (89)
142 2c2u_A DPS, DNA-binding stress 36.3 2.3E+02 0.0078 25.1 11.8 72 88-159 90-172 (207)
143 3rrk_A V-type ATPase 116 kDa s 36.2 1.7E+02 0.0058 27.0 9.3 56 89-170 224-279 (357)
144 2yjk_A AFP, DPS; metal-binding 36.0 1.9E+02 0.0065 24.1 8.8 32 88-119 50-82 (161)
145 1go4_E MAD1 (mitotic arrest de 35.9 97 0.0033 25.3 6.6 27 89-115 17-43 (100)
146 1quu_A Human skeletal muscle a 35.6 2.2E+02 0.0075 24.7 12.8 23 95-117 133-155 (250)
147 1m1j_C Fibrinogen gamma chain; 35.3 2.1E+02 0.0072 28.3 10.1 25 91-115 38-62 (409)
148 4hpq_C ATG17, KLTH0D15642P; au 35.0 1.9E+02 0.0065 28.7 9.8 16 8-23 251-266 (413)
149 3efg_A Protein SLYX homolog; x 34.8 53 0.0018 25.4 4.7 25 91-115 14-38 (78)
150 1ji5_A DLP-1; dodecamer, four- 34.5 1.7E+02 0.0058 23.1 9.8 74 89-163 32-116 (142)
151 1jig_A DLP-2; dodecamer, four- 34.0 1.8E+02 0.0061 23.2 9.7 74 89-163 36-120 (146)
152 1aq5_A Matrilin-1, CMP, cartil 33.7 57 0.0019 23.6 4.3 25 90-114 22-46 (47)
153 3pwx_A Putative flagellar HOOK 33.7 1E+02 0.0035 27.7 7.1 73 98-179 21-100 (239)
154 3rkg_A Magnesium transporter M 33.7 2.9E+02 0.01 25.6 10.8 71 90-163 173-248 (261)
155 4ghu_A TNF receptor-associated 33.6 44 0.0015 29.2 4.5 29 89-117 5-33 (198)
156 3mq9_A Bone marrow stromal ant 33.4 1.7E+02 0.0057 28.0 8.9 30 76-106 363-392 (471)
157 1s35_A Beta-I spectrin, spectr 33.2 2.1E+02 0.0072 23.8 9.3 24 94-117 3-26 (214)
158 1n1q_A DPS protein; four-helix 33.1 1.9E+02 0.0064 23.2 9.9 74 89-163 39-123 (149)
159 1ca9_A TRAF2, protein (TNF rec 32.8 39 0.0013 28.8 4.0 29 88-116 7-35 (192)
160 3kbt_A Beta-I spectrin, spectr 32.8 1.9E+02 0.0066 25.6 8.7 64 89-157 42-105 (326)
161 1m1j_B Fibrinogen beta chain; 32.7 3.2E+02 0.011 27.6 11.1 16 96-111 98-113 (464)
162 2yfa_A MCPS, methyl-accepting 32.7 1.9E+02 0.0065 24.7 8.4 68 93-169 173-240 (258)
163 2wam_A RV2714, conserved hypot 32.4 86 0.0029 30.4 6.7 64 101-170 272-343 (351)
164 3zrx_A AF1503 protein, osmolar 32.2 1.1E+02 0.0039 21.7 5.9 28 88-115 38-65 (115)
165 3k8w_A Flagellin homolog; flag 31.9 1.2E+02 0.0042 29.3 7.7 69 93-170 31-108 (326)
166 3fb2_A Spectrin alpha chain, b 31.6 2.4E+02 0.0081 23.8 9.6 25 93-117 15-39 (218)
167 3haj_A Human pacsin2 F-BAR; pa 31.4 1.4E+02 0.0047 29.4 8.1 18 14-31 144-161 (486)
168 3r2p_A Apolipoprotein A-I; amp 31.2 1.2E+02 0.0041 26.1 6.9 17 10-26 25-41 (185)
169 3mov_A Lamin-B1; LMNB1, B-type 30.9 57 0.0019 26.1 4.4 20 96-115 35-54 (95)
170 2chp_A MRGA, metalloregulation 30.8 2.2E+02 0.0077 23.4 12.5 73 88-160 42-124 (153)
171 1dn1_B Syntaxin 1A, syntaxin b 30.8 2.6E+02 0.0088 25.4 9.4 67 88-157 32-99 (267)
172 2nps_B Syntaxin 13, vesicle-as 30.8 1.6E+02 0.0055 21.7 9.3 39 130-168 22-60 (71)
173 2xhe_B Syntaxin1; exocytosis, 30.7 1.1E+02 0.0036 27.9 6.7 73 84-158 42-115 (279)
174 2d5k_A DPS, DPS family protein 30.6 2.2E+02 0.0076 23.2 10.1 74 89-163 38-122 (156)
175 1t72_A Phosphate transport sys 30.4 1.7E+02 0.0058 24.8 7.7 21 93-113 6-26 (227)
176 4eah_A Formin-like protein 3, 30.4 2.2E+02 0.0075 27.6 9.3 65 93-175 289-353 (402)
177 3r8s_Y 50S ribosomal protein L 30.3 87 0.003 23.2 5.0 29 151-179 11-41 (63)
178 1fxk_A Prefoldin; archaeal pro 30.3 1.8E+02 0.0063 22.2 9.3 41 129-169 59-99 (107)
179 2vxx_A Starvation induced DNA 30.2 2.5E+02 0.0086 23.8 10.9 73 89-161 59-142 (192)
180 3fav_B ESAT-6, 6 kDa early sec 30.1 58 0.002 24.2 4.1 18 93-110 21-38 (94)
181 2pnv_A Small conductance calci 29.9 58 0.002 22.9 3.7 22 94-115 19-40 (43)
182 1fzc_B Fibrin; blood coagulati 29.8 55 0.0019 31.5 4.8 26 136-161 31-56 (328)
183 3s84_A Apolipoprotein A-IV; fo 29.8 1.9E+02 0.0066 26.7 8.4 22 87-108 55-76 (273)
184 3ibp_A Chromosome partition pr 29.7 1.1E+02 0.0038 29.5 6.9 55 78-149 208-263 (302)
185 3pmr_A Amyloid-like protein 1; 29.5 93 0.0032 28.7 6.1 63 3-110 32-95 (219)
186 2zqm_A Prefoldin beta subunit 29.4 74 0.0025 24.8 4.8 28 6-33 23-50 (117)
187 1xaw_A Occludin; coiled-coil, 29.4 2.7E+02 0.0094 23.9 10.3 88 74-170 31-137 (140)
188 3k1r_A Harmonin; protein-prote 29.4 37 0.0013 28.9 3.3 22 1-24 1-22 (192)
189 3t98_B Nucleoporin NUP58/NUP45 29.3 66 0.0023 25.8 4.5 34 128-163 58-91 (93)
190 3mtu_E Head morphogenesis prot 29.2 1.5E+02 0.0051 23.4 6.3 38 133-170 28-65 (77)
191 1fxk_A Prefoldin; archaeal pro 29.1 77 0.0026 24.4 4.8 27 8-34 20-46 (107)
192 3fb2_A Spectrin alpha chain, b 28.8 1.2E+02 0.004 25.8 6.3 23 94-116 122-144 (218)
193 2epl_X N-acetyl-beta-D-glucosa 28.6 1.5E+02 0.0052 30.6 8.2 21 150-170 528-548 (627)
194 1hlo_A Protein (transcription 28.5 1.9E+02 0.0064 21.7 8.2 58 98-164 22-79 (80)
195 3i00_A HIP-I, huntingtin-inter 28.4 48 0.0016 27.7 3.6 20 150-169 100-119 (120)
196 3r6n_A Desmoplakin; spectrin r 28.1 1E+02 0.0036 30.6 6.6 64 96-160 204-267 (450)
197 1zxa_A CGMP-dependent protein 28.0 69 0.0024 24.5 4.1 24 92-115 26-49 (67)
198 3htk_A Structural maintenance 27.9 1.6E+02 0.0054 20.7 7.2 26 90-115 4-29 (60)
199 3vmx_A Voltage-gated hydrogen 27.8 1E+02 0.0035 22.3 4.8 36 135-170 4-39 (48)
200 1i84_S Smooth muscle myosin he 27.7 1.2E+02 0.004 33.4 7.5 26 90-115 863-888 (1184)
201 3v2d_2 50S ribosomal protein L 27.7 1.2E+02 0.0042 23.0 5.6 30 150-179 17-48 (72)
202 3r2p_A Apolipoprotein A-I; amp 27.6 58 0.002 28.1 4.2 26 85-110 98-123 (185)
203 1ucu_A Phase 1 flagellin; flag 27.5 1.6E+02 0.0056 29.3 8.0 78 93-179 50-137 (494)
204 3zcc_A HAMP, osmolarity sensor 27.4 1.7E+02 0.0058 20.8 6.6 27 89-115 39-65 (114)
205 1t3u_A Conserved hypothetical 27.4 78 0.0027 24.8 4.6 27 80-106 19-45 (104)
206 2yfa_A MCPS, methyl-accepting 27.3 2E+02 0.0068 24.6 7.6 23 93-115 50-73 (258)
207 1ug8_A Poly(A)-specific ribonu 27.2 35 0.0012 27.4 2.5 38 3-40 8-57 (87)
208 3s84_A Apolipoprotein A-IV; fo 27.1 3.8E+02 0.013 24.8 10.4 23 86-108 32-54 (273)
209 2ke4_A CDC42-interacting prote 27.0 2.1E+02 0.0072 22.9 7.1 56 96-164 13-77 (98)
210 3k29_A Putative uncharacterize 26.7 3.4E+02 0.012 24.1 12.9 37 134-170 70-106 (169)
211 2nps_B Syntaxin 13, vesicle-as 26.4 89 0.0031 23.1 4.5 32 130-161 8-39 (71)
212 4ani_A Protein GRPE; chaperone 26.1 1.1E+02 0.0037 27.9 5.9 50 130-179 112-168 (213)
213 3zrx_A AF1503 protein, osmolar 26.1 1.6E+02 0.0054 20.9 5.8 28 87-114 44-71 (115)
214 3uun_A Dystrophin; triple heli 25.8 2.1E+02 0.0071 21.3 7.4 68 89-160 41-110 (119)
215 3a6m_A Protein GRPE, HSP-70 co 25.8 50 0.0017 29.1 3.5 80 89-179 42-126 (177)
216 2ykt_A Brain-specific angiogen 25.7 1.8E+02 0.0061 26.8 7.3 25 88-112 100-124 (253)
217 3lbx_B Beta-I spectrin, spectr 25.7 1.7E+02 0.0057 24.4 6.7 59 93-155 112-170 (185)
218 2gyq_A YCFI, putative structur 25.7 1.4E+02 0.0047 26.0 6.3 48 91-142 46-93 (173)
219 3c98_B Syntaxin-1A; protein co 25.3 3.2E+02 0.011 23.3 10.3 29 86-115 43-71 (279)
220 3a2a_A Voltage-gated hydrogen 25.2 1.2E+02 0.004 22.8 4.8 35 136-170 12-46 (58)
221 2wh0_Q Pkcev3, protein kinase 25.0 38 0.0013 22.2 1.9 13 103-115 11-23 (31)
222 1zww_A SH3-containing GRB2-lik 24.9 1.8E+02 0.0061 26.0 7.1 23 93-115 143-166 (256)
223 2gs4_A Protein YCIF; stress pr 24.8 1.8E+02 0.0063 25.0 6.8 29 91-119 39-68 (166)
224 3aco_A Pacsin2, protein kinase 24.8 2.9E+02 0.0098 25.5 8.7 69 91-171 192-261 (350)
225 2q12_A DIP13 alpha, DCC-intera 24.7 3.6E+02 0.012 23.8 9.8 66 94-170 172-238 (265)
226 3ajm_A Programmed cell death p 24.7 18 0.00061 33.4 0.4 56 129-184 123-189 (213)
227 2efl_A Formin-binding protein 24.7 3.1E+02 0.011 24.0 8.6 37 134-170 115-151 (305)
228 3ihr_A Ubiquitin carboxyl-term 24.4 3.5E+02 0.012 26.0 9.4 37 143-179 255-294 (328)
229 2zqm_A Prefoldin beta subunit 24.3 2.5E+02 0.0085 21.7 10.3 41 129-169 64-104 (117)
230 3zx6_A HAMP, methyl-accepting 24.3 2.6E+02 0.0089 26.0 8.3 31 131-161 76-106 (341)
231 2er8_A Regulatory protein Leu3 24.3 31 0.0011 24.9 1.6 18 98-115 49-66 (72)
232 3tnu_A Keratin, type I cytoske 24.2 1.3E+02 0.0044 24.7 5.6 65 101-167 13-77 (131)
233 3s9v_A Abietadiene synthase, c 24.1 1E+02 0.0035 33.0 6.0 69 84-153 504-592 (785)
234 1oxz_A ADP-ribosylation factor 23.7 3.8E+02 0.013 23.7 9.7 55 97-151 65-130 (186)
235 3pp5_A BRK1, protein brick1; t 23.7 1.2E+02 0.004 23.7 4.8 29 87-115 34-62 (73)
236 3m8j_A FOCB protein; all-alpha 23.6 1.5E+02 0.0051 24.7 5.8 30 146-182 79-108 (111)
237 3mq9_A Bone marrow stromal ant 23.1 3.2E+02 0.011 26.0 8.8 14 150-163 444-457 (471)
238 3oja_A Leucine-rich immune mol 23.1 3.1E+02 0.011 26.2 8.8 23 93-115 369-391 (487)
239 3iqc_A FLIS, flagellar protein 23.1 2.5E+02 0.0085 23.2 7.1 16 132-147 80-95 (131)
240 1lrz_A FEMA, factor essential 23.1 3.7E+02 0.013 25.5 9.3 15 82-96 218-232 (426)
241 4g1a_A AQ-C16C19 peptide; heli 22.9 33 0.0011 22.6 1.3 25 89-113 5-29 (32)
242 3ol1_A Vimentin; structural ge 22.8 3.1E+02 0.011 22.3 10.0 35 133-167 74-108 (119)
243 3o0z_A RHO-associated protein 22.7 3.3E+02 0.011 24.1 8.1 24 144-167 92-115 (168)
244 3auy_A DNA double-strand break 22.7 3.8E+02 0.013 24.8 9.1 26 90-115 162-187 (371)
245 1jth_B Syntaxin 1A; coiled-coi 22.7 1.1E+02 0.0039 22.8 4.5 32 130-161 12-43 (77)
246 1lwu_C Fibrinogen gamma chain; 22.6 1.9E+02 0.0066 27.7 7.2 22 149-170 33-54 (323)
247 3trt_A Vimentin; cytoskeleton, 22.3 2.4E+02 0.0081 20.8 9.1 14 102-115 32-45 (77)
248 3v47_C Flagellin; innate immun 22.3 1.1E+02 0.0037 30.6 5.5 71 100-179 20-97 (425)
249 3ak8_A DNA protection during s 22.2 3.5E+02 0.012 22.6 10.6 67 89-155 59-136 (167)
250 1vh6_A Flagellar protein FLIS; 22.1 3.2E+02 0.011 23.0 7.8 15 132-146 75-89 (145)
251 3oq3_A IFN-alpha-5, interferon 22.1 2.8E+02 0.0094 24.1 7.5 46 96-147 82-127 (166)
252 1gd2_E Transcription factor PA 22.1 1.5E+02 0.0053 22.5 5.1 10 106-115 30-39 (70)
253 1yvi_A Histidine-containing ph 21.9 1.1E+02 0.0036 25.4 4.6 15 87-101 41-55 (149)
254 3swk_A Vimentin; cytoskeleton, 21.9 70 0.0024 25.0 3.3 34 130-163 51-84 (86)
255 3nmd_A CGMP dependent protein 21.9 1.1E+02 0.0037 23.8 4.3 26 90-115 25-50 (72)
256 1fxk_C Protein (prefoldin); ar 21.8 1.2E+02 0.0041 24.5 4.8 28 6-33 18-45 (133)
257 1q08_A Zn(II)-responsive regul 21.7 1.2E+02 0.004 22.9 4.5 27 89-115 37-63 (99)
258 3rmi_A Chorismate mutase prote 21.7 3.2E+02 0.011 22.0 7.7 21 95-115 9-29 (114)
259 3p8c_E Probable protein brick1 21.5 1.4E+02 0.0046 23.4 4.8 22 94-115 48-69 (75)
260 1gax_A Valrs, valyl-tRNA synth 21.5 1.8E+02 0.0063 31.1 7.4 63 89-160 798-860 (862)
261 3uv4_A Second bromodomain of h 21.5 79 0.0027 26.9 3.8 27 90-116 117-143 (158)
262 4eve_A Neutrophil-activating p 21.4 3.6E+02 0.012 22.6 9.7 73 89-161 53-136 (164)
263 2rpa_A Katanin P60 ATPase-cont 21.2 2.5E+02 0.0085 21.7 6.3 27 93-119 25-51 (78)
264 4dhi_B Ubiquitin thioesterase 21.1 1.6E+02 0.0055 27.9 6.2 53 87-153 96-148 (284)
265 3hhm_B NISH2 P85alpha; PI3KCA, 21.0 5.7E+02 0.02 24.7 11.7 19 95-113 165-183 (373)
266 3umh_A Amyloid beta A4 protein 21.0 1.5E+02 0.0051 27.2 5.7 63 3-110 25-88 (211)
267 3uul_A Utrophin; spectrin repe 20.7 2.7E+02 0.0091 20.8 8.1 66 90-158 42-108 (118)
268 1r8i_A TRAC; VIRB5, helical bu 20.7 99 0.0034 27.3 4.4 29 90-118 14-42 (213)
269 2xdj_A Uncharacterized protein 20.7 1.2E+02 0.0043 23.7 4.5 19 153-171 49-67 (83)
270 3tso_C RAB11 family-interactin 20.6 1.3E+02 0.0044 23.7 4.4 31 85-115 15-45 (75)
271 4acr_A Glypican-1; proteoglyca 20.6 3E+02 0.01 28.0 8.3 77 91-177 67-157 (478)
272 2vz4_A Tipal, HTH-type transcr 20.4 1.1E+02 0.0037 23.9 4.2 28 88-115 78-105 (108)
273 3qks_A DNA double-strand break 20.1 92 0.0031 26.6 4.0 30 88-117 165-194 (203)
274 3he4_A Synzip6; heterodimeric 20.1 1.6E+02 0.0053 21.5 4.5 29 87-115 20-48 (56)
275 1x8y_A Lamin A/C; structural p 20.0 1.7E+02 0.0058 22.6 5.1 25 91-115 21-45 (86)
No 1
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=99.95 E-value=1.5e-28 Score=200.47 Aligned_cols=88 Identities=32% Similarity=0.479 Sum_probs=79.2
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 83 KKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (346)
Q Consensus 83 ~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lK 162 (346)
..|++||+++|++||+||++||+||||||+||.+.+. .+ .++||+|+.+|+++|++||+||+||+.||++|+.+|
T Consensus 4 ~~P~~yF~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~--~~---~~Tpq~L~~~l~~~h~~FiaLAa~l~~lH~~V~~~K 78 (93)
T 3t98_B 4 MAPADYFRVLVQQFEVQLQQYRQQIEELENHLATQAN--NS---HITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLK 78 (93)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH--HT---TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999997653 12 267999999999999999999999999999999999
Q ss_pred HHHHHHHH-hcCCC
Q 019120 163 TAYLADQR-RRGDG 175 (346)
Q Consensus 163 e~YL~~~R-r~GD~ 175 (346)
++||++|| ++||.
T Consensus 79 e~Yl~~rr~~~~d~ 92 (93)
T 3t98_B 79 EQYLSYRKMFLGDA 92 (93)
T ss_dssp HHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhccC
Confidence 99999999 78884
No 2
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=87.84 E-value=3 Score=31.33 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=58.8
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 83 KKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (346)
Q Consensus 83 ~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lK 162 (346)
+.-.+=+..++.+|...-..++..+.+|+..|..... .=. | .+-+.....++..+..+..+...|+.|.+.|....
T Consensus 8 ~v~~~~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~-~W~--G-~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a 83 (99)
T 3zbh_A 8 RLTPEELRGVARQYNVESSNVTELIARLDQMSHTLQG-IWE--G-ASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSA 83 (99)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCC--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcc--C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667888888888888888888888888874321 001 1 23455667777788888888888888888888888
Q ss_pred HHHHHHH
Q 019120 163 TAYLADQ 169 (346)
Q Consensus 163 e~YL~~~ 169 (346)
+.|-+.-
T Consensus 84 ~~~~~~d 90 (99)
T 3zbh_A 84 TILEDTD 90 (99)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886643
No 3
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=86.45 E-value=4.3 Score=30.59 Aligned_cols=77 Identities=6% Similarity=0.037 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
+...+.++......++..+++|+..|......=.+ ..-..-...+...++.+..|-.-|+.|.+.|+...+.|-..
T Consensus 10 l~~~a~~~~~~~~~i~~~l~~l~~~v~~l~~~W~G----~A~~af~~~~~~w~~~~~~~~~~L~~i~~~l~~~~~~y~~~ 85 (94)
T 3fav_B 10 IEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGG----SGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMAST 85 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGTC----TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999998844321111 23456778888888888888888888888888888888764
Q ss_pred H
Q 019120 169 Q 169 (346)
Q Consensus 169 ~ 169 (346)
-
T Consensus 86 d 86 (94)
T 3fav_B 86 E 86 (94)
T ss_dssp -
T ss_pred H
Confidence 3
No 4
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=85.59 E-value=19 Score=37.39 Aligned_cols=25 Identities=4% Similarity=-0.004 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHh
Q 019120 5 KAQLQERMAVVKDMLRNTEIAVRSF 29 (346)
Q Consensus 5 k~~~~~l~~~V~~~lrntE~Avrs~ 29 (346)
+.+|++|+..|.++-+|--.+-..|
T Consensus 63 tkrINELKnqLEdlsKnsKdseqy~ 87 (562)
T 3ghg_A 63 TNRINKLKNSLFEYQKNNKDSHSLT 87 (562)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhchhHHHHH
Confidence 3467777777777777666665444
No 5
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=85.31 E-value=7.3 Score=29.82 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.+|+..|..+..||.+.|..|...
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~ 28 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQ 28 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4789999999999999999998854
No 6
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=83.26 E-value=12 Score=27.82 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=52.3
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 84 ~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
.-.+=+..+..+|...-..++..+..|+..|...... =. | .+-+......+..+..+-.+...|+.|.+.|....+
T Consensus 9 v~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~~-W~--G-~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~A~ 84 (93)
T 4ioe_A 9 ITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQ-WA--G-ATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIAD 84 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-SC--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cC--c-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445577889999999999999999999999855421 11 1 233445555555555666666666666666666666
Q ss_pred HHHH
Q 019120 164 AYLA 167 (346)
Q Consensus 164 ~YL~ 167 (346)
.|-+
T Consensus 85 ~~~~ 88 (93)
T 4ioe_A 85 KFRN 88 (93)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 7
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=82.86 E-value=8.4 Score=29.33 Aligned_cols=25 Identities=20% Similarity=0.442 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.+|+..+..+..||.+.|..|...
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~ 28 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQ 28 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999998854
No 8
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=82.36 E-value=7.4 Score=28.99 Aligned_cols=78 Identities=12% Similarity=0.084 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 87 AFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYL 166 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL 166 (346)
+=+..++.+|......++..+++|+..+...... =. | .+-+.-...+...+..+-.|..-|+.|-+.|....+.|-
T Consensus 9 ~~l~~~A~~~~~~~~~l~~~l~~L~~~~~~L~~~-W~--G-~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~y~ 84 (97)
T 2vs0_A 9 EEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAAN-WE--G-QAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQ 84 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SC--S-STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cC--c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467788888888888888888888888743210 01 1 123455666677777777777777777777777777776
Q ss_pred HH
Q 019120 167 AD 168 (346)
Q Consensus 167 ~~ 168 (346)
+.
T Consensus 85 ~~ 86 (97)
T 2vs0_A 85 EQ 86 (97)
T ss_dssp C-
T ss_pred HH
Confidence 53
No 9
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=82.26 E-value=7.6 Score=35.54 Aligned_cols=27 Identities=19% Similarity=0.316 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+.+++.+|..+...+..||.++++.|+
T Consensus 126 Le~La~kf~rka~~~e~~L~~~~~~L~ 152 (235)
T 2odv_A 126 LQRIVTKLQMEAGLAEEQLNQADALLQ 152 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999999995
No 10
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=82.12 E-value=9 Score=29.38 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
+...+.+|+..-.++...+++|+..+......= . | ..-+.-...+...++.+..|..-|+.|.+.|....+.|-+.
T Consensus 12 l~~~A~~~~~~~~~l~~~l~~l~~~~~~L~~~W-~--G-~A~~af~~~~~~w~~~~~~l~~~L~~i~~~l~~~a~~y~~~ 87 (101)
T 3fav_A 12 LAQEAGNFERISGDLKTQIDQVESTAGSLQGQW-R--G-AAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRA 87 (101)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-C--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-c--h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999999999999987443211 1 1 23455667778888888888888888888888888887664
No 11
>3rip_A Gamma-tubulin complex component 4; helix bundles, gamma-tubulin ring complex, gamma-TURC, struc protein; 2.30A {Homo sapiens}
Probab=82.11 E-value=9.9 Score=38.93 Aligned_cols=31 Identities=26% Similarity=0.359 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 86 SAFLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 86 s~YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
..|.+-+.+-+++.|..|++.|-+||+.+..
T Consensus 83 g~v~~Al~~~i~~~L~~Y~~~i~~lE~~~l~ 113 (677)
T 3rip_A 83 GIYLRAFCTGLDSVLQPYRQALLDLEQEFLG 113 (677)
T ss_dssp SHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4699999999999999999999999999874
No 12
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=81.95 E-value=4.5 Score=33.33 Aligned_cols=50 Identities=20% Similarity=0.237 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCc-cccccHHHHHHHHHHHHHHH
Q 019120 97 EKYLGEFRQWIEELEQLILLDPDRNSSSHGS-SLLQSLPQVISNVHIFFVHV 147 (346)
Q Consensus 97 E~rL~~YRqqIEELE~~L~s~s~~~~S~~gs-~tpQ~L~~~L~~~hq~FvaL 147 (346)
|+=+..++.+||-..+-|++.+.+..+ +.. .+.|.|=..|..+|-..+..
T Consensus 3 ~ef~~~l~~sv~if~NRmksn~~RGrs-i~nDssVQsLF~~lt~MH~~Ll~~ 53 (98)
T 3f1i_H 3 EQFLKALQNAVTTFVNRMKSNHMRGRS-ITNDSAVLSLFQSINGMHPQLLEL 53 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCC-GGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-CcccHHHHHHHHHHHHHHHHHHHH
Confidence 455667788888888888866644333 221 36777777777777655543
No 13
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.69 E-value=8.6 Score=32.00 Aligned_cols=65 Identities=8% Similarity=0.101 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
|.++.+.....|..+-..|-.||+.|...+- ++|-...-+++|+.....-..+..+.+.|+++.+
T Consensus 12 f~~l~~~is~~I~~In~~vs~l~r~v~~LGT----------~kDt~~LR~kl~~~~~~t~~l~k~ts~~lk~L~~ 76 (130)
T 2dnx_A 12 FSSIIQTCSGNIQRISQATAQIKNLMSQLGT----------KQDSSKLQENLQQLQHSTNQLAKETNELLKELGS 76 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999996552 3344444555555554444445555555544444
No 14
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=79.74 E-value=10 Score=34.07 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=28.5
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019120 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 84 ~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L 114 (346)
.=+|.|..+|..||+++...+.||+.|.+..
T Consensus 14 ~DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~ 44 (265)
T 2q12_A 14 EDSPQTRSLLGVFEEDATAISNYMNQLYQAM 44 (265)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4489999999999999999999999999876
No 15
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=78.63 E-value=9.6 Score=36.12 Aligned_cols=78 Identities=6% Similarity=0.135 Sum_probs=57.9
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 86 SAFLQQT-VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 86 s~YF~ql-V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~ 164 (346)
..||..| +.+....++.|++||+|.=..|....+.+- .-+.++...|...|.-++++..+...+..+++++|..
T Consensus 19 ~~~fh~l~~~d~s~~~~~~~~q~~~~l~~~~~~~~~~~-----~~~~~~v~~l~~~y~~l~~~~~~~~~~~~~~~~~K~~ 93 (267)
T 3htk_C 19 GKYFHNLHARDLSNIYQQCYKQIDETINQLVDSTSPST-----IGIEEQVADITSTYKLLSTYESESNSFDEHIKDLKKN 93 (267)
T ss_dssp HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCS-----SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCchhhhHHHHHHHHHHHHHHHHHHHhcCCCCc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455554 456677788888888775444443333211 2267888999999999999999999999999999999
Q ss_pred HHHH
Q 019120 165 YLAD 168 (346)
Q Consensus 165 YL~~ 168 (346)
|...
T Consensus 94 yk~~ 97 (267)
T 3htk_C 94 FKQS 97 (267)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9887
No 16
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=76.52 E-value=15 Score=32.32 Aligned_cols=73 Identities=19% Similarity=0.165 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
..+.|+.++..+...+..|.++|..|.... -..+.|..-+..++--|..+-.++..|.++-+++-+.++..
T Consensus 66 ~~~~I~~L~~El~~l~~ki~dLeeel~eK~---------K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~r 136 (152)
T 3a7p_A 66 LLNTLAILQKELKSKEQEIRRLKEVIALKN---------KNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKK 136 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356889999999999999999998887332 12456666666666667777677777776666666666665
Q ss_pred HH
Q 019120 169 QR 170 (346)
Q Consensus 169 ~R 170 (346)
..
T Consensus 137 k~ 138 (152)
T 3a7p_A 137 TE 138 (152)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 17
>3h6p_C ESAT-6-like protein ESXR; four-helix bundle, structural genomics, PSI-2, protein struc initiative, TB structural genomics consortium; 1.91A {Mycobacterium tuberculosis} PDB: 2kg7_B 3q4h_B
Probab=74.64 E-value=4.7 Score=30.82 Aligned_cols=78 Identities=9% Similarity=0.024 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
+..++.++......++..+++|+..|......-.+ ..-..........++.+..|-.-|..|.+.|+...+.|...
T Consensus 11 ~~~~a~~i~~~~~~i~~~l~~l~~~v~~L~~~W~G----~A~~ay~~~~~~W~~~~~~l~~~L~~i~~~l~~a~~~y~~~ 86 (96)
T 3h6p_C 11 MMAHAGDMAGYAGTLQSLGADIASEQAVLSSAWQG----DTGITYQGWQTQWNQALEDLVRAYQSMSGTHESNTMAMLAR 86 (96)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTGGGCCT----TSSSCHHHHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888888999999988844321111 23466778888888888888888888888888888887764
Q ss_pred HH
Q 019120 169 QR 170 (346)
Q Consensus 169 ~R 170 (346)
-+
T Consensus 87 d~ 88 (96)
T 3h6p_C 87 DG 88 (96)
T ss_dssp --
T ss_pred HH
Confidence 33
No 18
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=74.53 E-value=21 Score=28.86 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 99 YLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 99 rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
.+++-.+.|.+||+.+.-.. ..+++|...++.|.+..-.+-..++..+++|+.-+++-.+.
T Consensus 15 ~i~eR~~eI~~Ie~~I~eL~---------~iF~dla~lV~eQge~Id~Ie~nv~~a~~~v~~g~~eL~kA 75 (109)
T 3hd7_B 15 EIETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKA 75 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666665332 23667788888888888888777777777777766654443
No 19
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=74.03 E-value=20 Score=27.04 Aligned_cols=77 Identities=12% Similarity=0.063 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
=+..+..+|...-..+++.+..|+..|......= .+ .+-+......+..+..|-.+...|+.|-+.|....+.|-+
T Consensus 12 ~l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W-~G---~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~ 87 (98)
T 3gwk_C 12 ELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENW-DG---STFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQ 87 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHB-CS---STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-Cc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777777777777777777776322100 01 1234555666667777777777777777777777777765
Q ss_pred H
Q 019120 168 D 168 (346)
Q Consensus 168 ~ 168 (346)
.
T Consensus 88 ~ 88 (98)
T 3gwk_C 88 T 88 (98)
T ss_dssp H
T ss_pred H
Confidence 4
No 20
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=73.33 E-value=30 Score=28.48 Aligned_cols=69 Identities=9% Similarity=0.112 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
+.+.|..++..|...+.+..-||..|.-.- +.....|...+.....|=+.++.+.+.++.+...|-.+
T Consensus 41 lrr~iq~L~~el~~l~~~~~~LE~~l~e~e------------~~~~~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 108 (129)
T 3tnu_B 41 MNRMIQRLRAEIDNVKKQCANLQNAIADAE------------QRGELALKDARNKLAELEEALQKAKQDMARLLREYQEL 108 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 456677788888888887777777776221 22244566666666677777777777777777666554
Q ss_pred H
Q 019120 169 Q 169 (346)
Q Consensus 169 ~ 169 (346)
.
T Consensus 109 l 109 (129)
T 3tnu_B 109 M 109 (129)
T ss_dssp H
T ss_pred H
Confidence 3
No 21
>3ts9_A Interferon-induced helicase C domain-containing P; helix bundle, fancm helicase, super family 2 helicase, SF2 H DEXD/H helicase; 2.00A {Mus musculus}
Probab=72.87 E-value=9 Score=33.21 Aligned_cols=74 Identities=12% Similarity=0.183 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c---CCC
Q 019120 101 GEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRR--R---GDG 175 (346)
Q Consensus 101 ~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr--~---GD~ 175 (346)
|.|.|||-++|+.-....++. ...-...|++-|++++== ...+..+.++-|++-|-+.+.. . .|.
T Consensus 36 Q~YEQwvV~~ek~aa~~~~r~--------~rvcAeHLRkYNdAL~In--dtiRm~DAl~~L~~Fy~~e~~~k~~~~~~~~ 105 (138)
T 3ts9_A 36 QHYEQWAIQMEKKAAKDGNRK--------DRVCAEHLRKYNEALQIN--DTIRMIDAYSHLETFYTDEKEKKFAVLNDSK 105 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTCHH--------HHHHHHHHHHHHHHHHHH--HHSCHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred hHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHhhHHHHhc--cHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 679999999999866444311 122356677767665432 4455667788888888877652 1 222
Q ss_pred CCc-cchhhH
Q 019120 176 SDP-FLEADR 184 (346)
Q Consensus 176 ~DP-FaEadr 184 (346)
..+ |+++||
T Consensus 106 ~~~~~d~ter 115 (138)
T 3ts9_A 106 KSLKLDETDE 115 (138)
T ss_dssp -CCSCCHHHH
T ss_pred cccccChHHH
Confidence 223 778876
No 22
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=72.73 E-value=13 Score=28.44 Aligned_cols=25 Identities=12% Similarity=0.255 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+..|+..+.+...||.+-|..|...
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~ 29 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNAD 29 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 5789999999999999999888743
No 23
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=72.01 E-value=34 Score=28.34 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
=+.+.|..++..|+..+.+..-||..|.-.- +.....|...+.....|=+.++.+.+.++.+...|-.
T Consensus 42 elrr~iq~L~~el~~l~~~~~sLE~~l~e~e------------~~~~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~ 109 (131)
T 3tnu_A 42 ELRRTMQNLEIELQSQLSMKASLENSLEETK------------GRYCMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKI 109 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566788888888888888888888777221 2234556666666667777777777777777777755
Q ss_pred HH
Q 019120 168 DQ 169 (346)
Q Consensus 168 ~~ 169 (346)
+.
T Consensus 110 Ll 111 (131)
T 3tnu_A 110 LL 111 (131)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 24
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=71.31 E-value=22 Score=33.22 Aligned_cols=29 Identities=24% Similarity=0.412 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
.+..+|++|..-+..+...|++||..+..
T Consensus 161 lld~ivd~~~~~l~~l~~~i~~lE~~l~~ 189 (339)
T 4ev6_A 161 ILNEITRSYSRILMNLEDELEELEDKLLA 189 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 35678899999999999999999998763
No 25
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=71.07 E-value=32 Score=26.65 Aligned_cols=61 Identities=20% Similarity=0.165 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYL 166 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL 166 (346)
.++=++.+|++|..+...|++||..|..-+- +. ++ ++-+..|..+++.|.+.++.+=+.++
T Consensus 20 eqrEle~le~~Ie~LE~~i~~le~~ladp~~-y~--------~d--------~~~~~~l~~~l~~~e~eLe~~~erWe 80 (89)
T 2lw1_A 20 LQRELEQLPQLLEDLEAKLEALQTQVADASF-FS--------QP--------HEQTQKVLADMAAAEQELEQAFERWE 80 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTG-GG--------SC--------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-cc--------CC--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667899999999999999999999873221 10 11 22333445566666666666655543
No 26
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=70.55 E-value=34 Score=30.81 Aligned_cols=29 Identities=24% Similarity=0.412 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
-+..+|++|..-|..+...||+||..|..
T Consensus 161 lld~ivd~y~~~l~~i~~~id~lE~~l~~ 189 (280)
T 4egw_A 161 ILNEITRSYSRILMNLEDELEELEDKLLA 189 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35678899999999999999999998873
No 27
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=69.90 E-value=57 Score=31.95 Aligned_cols=37 Identities=5% Similarity=0.026 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 131 QSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 131 Q~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
+.|...++.+-+-.-.+..+++.+++++++.+++|-+
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETED 541 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhh
Confidence 4555666666666666666666777777666666653
No 28
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=69.23 E-value=38 Score=29.94 Aligned_cols=78 Identities=15% Similarity=0.020 Sum_probs=46.3
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 78 YRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 78 ys~~p~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|.++..--.+=+.++.++|.+++...|++|.+....|+..-..+. +. ...+ -+|+.++..|+++
T Consensus 65 ~LnLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~--~D-------eakI-------~aL~~Ei~~Lr~q 128 (175)
T 3lay_A 65 GSPLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASS--PD-------TAKI-------NAVAKEMESLGQK 128 (175)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS--CC-------HHHH-------HHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CC-------HHHH-------HHHHHHHHHHHHH
Confidence 455544444556778888888888888887776666662211011 11 2222 3556677788888
Q ss_pred HHHHHHHHHHHHHh
Q 019120 158 VETMKTAYLADQRR 171 (346)
Q Consensus 158 Ve~lKe~YL~~~Rr 171 (346)
+.+.+..|.+..++
T Consensus 129 L~~~R~k~~~em~K 142 (175)
T 3lay_A 129 LDEQRVKRDVAMAQ 142 (175)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777666554
No 29
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=69.01 E-value=17 Score=36.76 Aligned_cols=18 Identities=11% Similarity=0.108 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHhhchH
Q 019120 6 AQLQERMAVVKDMLRNTE 23 (346)
Q Consensus 6 ~~~~~l~~~V~~~lrntE 23 (346)
..|++|++.|.++-+.+-
T Consensus 100 ~~LqeLe~~l~~lsn~Ts 117 (464)
T 1m1j_B 100 PVLRDLKDRVAKFSDTST 117 (464)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhh
Confidence 457777777766644333
No 30
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=68.17 E-value=21 Score=30.05 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
..+|+..+..+..||+++|..|...
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~ 29 (216)
T 1u5p_A 5 QQNFNTGIKDFDFWLSEVEALLASE 29 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 4689999999999999999999754
No 31
>1sfc_B Protein (syntaxin 1A), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1l4a_B
Probab=67.55 E-value=25 Score=26.99 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
+++-.+.|.+||+-+.-.. ..+++|...+..|-+..-.+-..|+...++|+.-..+-.+..+
T Consensus 16 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA~~ 77 (83)
T 1sfc_B 16 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455666666665332 2366778888888888777777777777777777666555544
No 32
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=67.33 E-value=50 Score=32.93 Aligned_cols=19 Identities=5% Similarity=0.115 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhhchHH
Q 019120 6 AQLQERMAVVKDMLRNTEI 24 (346)
Q Consensus 6 ~~~~~l~~~V~~~lrntE~ 24 (346)
.+|++|+..|.++-|+...
T Consensus 67 ~rIe~L~~~L~~~s~s~~~ 85 (390)
T 1deq_A 67 SRINKLRDSLFNYQKNSKD 85 (390)
T ss_pred HHHHHHHHHHHHHHHhhhH
Confidence 3455555555555444443
No 33
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=67.31 E-value=6.6 Score=39.23 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHhh
Q 019120 5 KAQLQERMAVVKDMLRNTEIAVRSFM 30 (346)
Q Consensus 5 k~~~~~l~~~V~~~lrntE~Avrs~~ 30 (346)
|..|++|...|.++-+.|-.|-..-.
T Consensus 37 ~~~l~~L~~~l~~isn~Ts~~~~~v~ 62 (411)
T 3ghg_C 37 DKDLQSLEDILHQVENKTSEVKQLIK 62 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 45788888888888887777765444
No 34
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=66.79 E-value=24 Score=26.63 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
+++-.+.|.+||+.+.-.. ..+++|...+..|-+..-.+-..|+...++|+....+-....+
T Consensus 5 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~~ 66 (77)
T 1jth_B 5 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 66 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666655322 2366788888888888888877888888877777666544443
No 35
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=66.75 E-value=14 Score=28.77 Aligned_cols=34 Identities=9% Similarity=0.174 Sum_probs=17.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
+++|..+|-.|.+-.-.|..+|..|.++++++..
T Consensus 30 IeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 30 LTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4455566666666666666666666666555443
No 36
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=65.57 E-value=52 Score=31.19 Aligned_cols=29 Identities=21% Similarity=0.289 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 85 PSAFLQQTVARFEKYLGEFRQWIEELEQL 113 (346)
Q Consensus 85 Ps~YF~qlV~~FE~rL~~YRqqIEELE~~ 113 (346)
=+|.|...|+.||+++...+.||+.|-+.
T Consensus 38 DSP~FRa~l~~~E~~~~~l~~~l~kl~k~ 66 (407)
T 4h8s_A 38 DSPQTRSLLSVFEEDAGTLTDYTNQLLQA 66 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999988877664
No 37
>3b5n_B Protein SSO1; snare complex, syntaxin, synaptobrevin, SNAP-25, SSO1P, SNC1P, SEC9P, SSO1, SNC1, coiled coil; 1.60A {Saccharomyces cerevisiae} SCOP: h.1.15.1
Probab=64.09 E-value=35 Score=25.28 Aligned_cols=61 Identities=11% Similarity=-0.002 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQ 169 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~ 169 (346)
++.-.+.|.+||+-+.-.. ..+++|...+..|-+..-.+-..|+...++|+....+-.+..
T Consensus 5 i~eR~~ei~~ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L~kA~ 65 (69)
T 3b5n_B 5 VQARHQELLKLEKSMAELT---------QLFNDMEELVIEQQENVDVIDKNVEDAQLDVEQGVGHTDKAV 65 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455556666555222 236677777777777777777777777777777666554443
No 38
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=62.75 E-value=11 Score=29.47 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=50.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 86 SAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (346)
Q Consensus 86 s~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~Y 165 (346)
.+-+..++.++......++..|++|+..|...... +-=.| ..-+.-.......++.+-.|-.-|+.|.+.|+...+.|
T Consensus 13 ~~~l~~~a~~~~~~~~~i~~~l~~L~~~v~~L~~~-g~W~G-~A~~ay~~~~~~W~~~a~~l~~~L~~i~~~l~~a~~~y 90 (103)
T 4i0x_B 13 LDHIEQVTSRARGFKEFVTENLDQLESRAQKLVQS-GQWAG-AAAAAYSQAHKEWMDAARELVEGLSQMEEAARTAHGAY 90 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeec-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577888888888888888888888888733210 00001 22344556666666666666666777777776666666
Q ss_pred HHH
Q 019120 166 LAD 168 (346)
Q Consensus 166 L~~ 168 (346)
...
T Consensus 91 ~~~ 93 (103)
T 4i0x_B 91 SEA 93 (103)
T ss_dssp ---
T ss_pred HHH
Confidence 553
No 39
>1n7s_B Syntaxin 1A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_B 3rk3_B 3rl0_B 1kil_B
Probab=61.91 E-value=27 Score=25.82 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~Y 165 (346)
++.-.+.|.+||+.+.-.. ..+++|...+..|-+..-.+-..|....++|+...++-
T Consensus 7 i~eR~~ei~~Ie~~i~eL~---------~iF~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~~L 63 (68)
T 1n7s_B 7 IETRHSEIIKLENSIRELH---------DMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDT 63 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555222 23556677777777766666666666666666655543
No 40
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=61.36 E-value=39 Score=28.34 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+..|+.++.....||.+.|..|...
T Consensus 109 l~~F~~~~~~~~~Wl~~~E~~l~~~ 133 (214)
T 1s35_A 109 FQEFQKDAKQAEAILSNQEYTLAHL 133 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3456666666777888888887643
No 41
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=61.30 E-value=29 Score=26.55 Aligned_cols=77 Identities=10% Similarity=-0.057 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
-+.....+|.....+++..|++|+..|......= . | ..-..-...+...++.+..|-.-|+.|.+.|....+.|-.
T Consensus 4 el~~~a~~~~~~~~~i~~~l~~l~~~v~~l~~~W-~--G-~Aa~af~~~~~~w~~~a~~l~~~L~~i~~~l~~aa~~y~~ 79 (94)
T 4i0x_A 4 EVGALSKFAASLADQMRAGSNSLDRDVQSLFGVW-K--G-SAADAYRSGWDEMQDGATKVWNALTDIASTLGSNAAAFHA 79 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTC-C--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c--h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888888888888888888887332211 1 1 2345566778888888888887888888777777766655
Q ss_pred H
Q 019120 168 D 168 (346)
Q Consensus 168 ~ 168 (346)
.
T Consensus 80 ~ 80 (94)
T 4i0x_A 80 Q 80 (94)
T ss_dssp -
T ss_pred H
Confidence 3
No 42
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=61.02 E-value=21 Score=33.70 Aligned_cols=75 Identities=8% Similarity=0.045 Sum_probs=45.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--C--------------CCCC--CCc-cccccHHHHHHHHHHHHH
Q 019120 85 PSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPD--R--------------NSSS--HGS-SLLQSLPQVISNVHIFFV 145 (346)
Q Consensus 85 Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~--~--------------~~S~--~gs-~tpQ~L~~~L~~~hq~Fv 145 (346)
=+|.|..+|..||+++...+.||+.|-+.....-+ + +.+. ++. ..-..+..+|.++.+.+-
T Consensus 15 DSP~FR~~l~~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l~~f~~~~~ 94 (385)
T 2q13_A 15 DSPQTRSLLGVFEEDATAISNYMNQLYQAMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTLQQFSKVID 94 (385)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCC---CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHHHH
Confidence 37899999999999999999999887775431000 0 0000 100 011224467777777777
Q ss_pred HHHHHHHHHHHHHH
Q 019120 146 HVAAKAESIHQYVE 159 (346)
Q Consensus 146 aLAArva~LHe~Ve 159 (346)
.|..-...|.++++
T Consensus 95 ei~~~~~~l~~~~~ 108 (385)
T 2q13_A 95 ELSSCHAVLSTQLA 108 (385)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77665555565543
No 43
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=59.31 E-value=26 Score=34.22 Aligned_cols=37 Identities=8% Similarity=0.148 Sum_probs=18.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 132 SLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 132 ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
.|...|.++.+-...+-.+++.+.++++++++.|.+.
T Consensus 7 ~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 43 (403)
T 4etp_A 7 ALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKE 43 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444445555555555555555543
No 44
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=59.30 E-value=24 Score=33.50 Aligned_cols=26 Identities=19% Similarity=0.399 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+++.+|+.++..+..||++.|..|..
T Consensus 131 ~~~~~f~~~~~~~~~Wl~e~e~~l~~ 156 (476)
T 1hci_A 131 HLAEKFRQKASTHETWAYGKEQILLQ 156 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34688888899999999999999874
No 45
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=59.29 E-value=27 Score=31.06 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
...|+..+..+..||+++|..|...
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~ 29 (322)
T 1u4q_A 5 QQNFNTGIKDFDFWLSEVEALLASE 29 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5689999999999999999998853
No 46
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=59.23 E-value=60 Score=26.18 Aligned_cols=36 Identities=11% Similarity=0.088 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 135 QVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 135 ~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
.-+..+.+.....-..|..+...|+..++.+++.++
T Consensus 74 ~fi~~L~~~I~~q~~~l~~~~~~~e~~r~~l~~a~~ 109 (150)
T 3ajw_A 74 QFIQTLEKAIEQHRLQLTQWTQKVDLALKSWREKKQ 109 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444455566666777777777777665
No 47
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=58.60 E-value=31 Score=34.28 Aligned_cols=74 Identities=11% Similarity=0.205 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRG 173 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~G 173 (346)
+.+++.|..++..|+.+++.|......... +.+ .....+.++......++..|.+..+++++.|.+...+.|
T Consensus 295 ~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~------~~d--~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFG 366 (483)
T 2j1d_G 295 TELDKEISTLRSGLKAVETELEYQKSQPPQ------PGD--KFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFG 366 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSCCC------TTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCC------chh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455667777777777777777633210000 111 123344444555667899999999999999999999888
Q ss_pred CC
Q 019120 174 DG 175 (346)
Q Consensus 174 D~ 175 (346)
..
T Consensus 367 Ed 368 (483)
T 2j1d_G 367 EE 368 (483)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 48
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=58.35 E-value=51 Score=25.47 Aligned_cols=77 Identities=8% Similarity=0.025 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIF-------FVHVAAKAESIHQYVETMKTAY 165 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~-------FvaLAArva~LHe~Ve~lKe~Y 165 (346)
.+.++.-...|+....+|+..|. +|...|..+... ..+-...-++.++.++++++..
T Consensus 13 ~~~l~~~a~~~~~~~~~i~~~l~----------------~L~~~v~~L~~~g~W~G~A~~ay~~~~~~W~~~a~~l~~~L 76 (103)
T 4i0x_B 13 LDHIEQVTSRARGFKEFVTENLD----------------QLESRAQKLVQSGQWAGAAAAAYSQAHKEWMDAARELVEGL 76 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHhcCCCeechHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666667777777776665 333333343333 3333444566666677777766
Q ss_pred HHHHHhcCCCCCccchhhHH
Q 019120 166 LADQRRRGDGSDPFLEADRR 185 (346)
Q Consensus 166 L~~~Rr~GD~~DPFaEadr~ 185 (346)
-.+.+.+.+..+=|.+.|++
T Consensus 77 ~~i~~~l~~a~~~y~~~e~~ 96 (103)
T 4i0x_B 77 SQMEEAARTAHGAYSEAQEA 96 (103)
T ss_dssp HHHHHHHHHHHTCC------
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66666555555555555443
No 49
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=57.51 E-value=33 Score=30.02 Aligned_cols=29 Identities=21% Similarity=0.429 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.++..+|+..+.....||++.|..|...
T Consensus 12 Le~l~~~F~~~~~e~~~Wl~e~e~~l~~~ 40 (250)
T 1quu_A 12 LEHLAEKFRQKASTHETWAYGKEQILLQK 40 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHhcCC
Confidence 45668899999999999999999999853
No 50
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=57.42 E-value=48 Score=32.89 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~ 172 (346)
++.++..|..+++.|+.+|+.|..... ..+. -..+. ..+..+.-....++..|.+..+++.+.|.+...+.
T Consensus 283 ~~~l~~dl~~L~~~l~~v~~~l~~~~~--~~~~----~d~f~---~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yF 353 (457)
T 3obv_E 283 AENLQKSLDQMKKQIADVERDVQNFPA--ATDE----KDKFV---EKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYF 353 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCC--CSST----TCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC--Ccch----hHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356788888999999999998874321 0000 11222 33334444555788888888889999999999987
Q ss_pred CC
Q 019120 173 GD 174 (346)
Q Consensus 173 GD 174 (346)
|.
T Consensus 354 ge 355 (457)
T 3obv_E 354 VF 355 (457)
T ss_dssp TC
T ss_pred CC
Confidence 73
No 51
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=56.10 E-value=33 Score=28.69 Aligned_cols=51 Identities=14% Similarity=0.135 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHH
Q 019120 92 TVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKA 151 (346)
Q Consensus 92 lV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArv 151 (346)
|-..|.+....+++.+++|+..|...++. |..-....-.+|+.++.|.+-+
T Consensus 42 lk~~f~~~a~~~~~~~~eL~~~i~~lGg~---------p~~~~s~~g~~hr~~~~lks~~ 92 (153)
T 4etr_A 42 LKAAMLEQSRDCAAAADELERIVLELGGK---------PKDSTSFAGDLHRRWVDLKSLV 92 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCC---------C---------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------CCCCCcHHHHHHHHHHHHHHHh
Confidence 46678899999999999999999966541 3333456778888888776554
No 52
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=56.09 E-value=52 Score=27.38 Aligned_cols=24 Identities=25% Similarity=0.457 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+.+|...+.....||++.|..|..
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~ 25 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSS 25 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcC
Confidence 568999999999999999998764
No 53
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=55.76 E-value=72 Score=24.97 Aligned_cols=28 Identities=18% Similarity=0.227 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
.-+.++.++...|+.+|+++++.+....
T Consensus 17 ~~l~~L~~~~~~l~~~i~~l~~~l~~l~ 44 (112)
T 1l8d_A 17 EERNEITQRIGELKNKIGDLKTAIEELK 44 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455666777788888888888887443
No 54
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=55.65 E-value=23 Score=28.34 Aligned_cols=28 Identities=11% Similarity=0.141 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 134 PQVISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 134 ~~~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
-..|+..++-.-.||..+++|-+-|+++
T Consensus 54 i~~Lk~en~~L~elA~~~q~la~~i~~L 81 (83)
T 1wlq_A 54 IARLRKENKDLAEVAEHVQYMAEVIERL 81 (83)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677777777777777777766654
No 55
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=55.57 E-value=50 Score=27.48 Aligned_cols=23 Identities=26% Similarity=0.406 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 019120 94 ARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s 116 (346)
.+|+.++.....||.+.|..|..
T Consensus 109 ~~f~~~~~e~~~Wl~~~e~~l~~ 131 (213)
T 1cun_A 109 QQFVANVEEEEAWINEKMTLVAS 131 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 45777777778899999887763
No 56
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=54.91 E-value=75 Score=30.57 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~ 172 (346)
++.+++.+..+++.|+.+++.+........+ ...+.+ ..++.+..+......+++.|.+..+.+++.|.+...+.
T Consensus 293 ~~~l~~d~~~L~~~l~~v~~~l~~~~~s~~~---~~~~~d--~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yf 367 (411)
T 1ux5_A 293 IEQLVNDCKDFSQSIVNVERSVEIGNLSDSS---KFHPLD--KVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTY 367 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTTCTT---SSCTTC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCccc---ccCccc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3566677778888888888877642210111 001111 23344444444555688999999999999999999987
Q ss_pred CCC
Q 019120 173 GDG 175 (346)
Q Consensus 173 GD~ 175 (346)
|..
T Consensus 368 ged 370 (411)
T 1ux5_A 368 GED 370 (411)
T ss_dssp TCC
T ss_pred CCC
Confidence 743
No 57
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1
Probab=54.81 E-value=23 Score=31.34 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
.+..+|++|..-|..+...||+||..|..
T Consensus 176 lld~ivd~y~~~l~~i~~~id~lE~~v~~ 204 (269)
T 2bbh_A 176 LIDALVDDYFVLLEKIDDEIDVLEEEVLE 204 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 35578899999999999999999998763
No 58
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=54.50 E-value=63 Score=30.40 Aligned_cols=72 Identities=13% Similarity=0.155 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~ 172 (346)
++.++..|..+++.|..+|+.+..... ..+. -..+... +.++.-....++..|.+..+++.+.|.+...+.
T Consensus 212 ~~~l~~~l~~l~~~~~~~~~~l~~~~~--~~~~----~d~f~~~---m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yf 282 (340)
T 1v9d_A 212 AENLQKSLDQMKKQIADVERDVQNFPA--ATDE----KDKFVEK---MTSFVKDAQEQYNKLRMMHSNMETLYKELGDYF 282 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCC--CSSS----SCCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc--ccch----hHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356788899999999999998874321 1111 1122333 333334445678888888888899999999877
Q ss_pred C
Q 019120 173 G 173 (346)
Q Consensus 173 G 173 (346)
|
T Consensus 283 g 283 (340)
T 1v9d_A 283 V 283 (340)
T ss_dssp T
T ss_pred C
Confidence 6
No 59
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=54.23 E-value=24 Score=32.45 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=36.4
Q ss_pred hhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHH
Q 019120 75 FDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESI 154 (346)
Q Consensus 75 ~Dfys~~p~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~L 154 (346)
.|-++. ..|++.||++|.+ +|=..+.-.++|-|++-.... ..++-...|+..++-.-.||..+++|
T Consensus 86 eDL~~~--e~Pse~YWk~lAE--~RR~AL~eaLeEN~~Lh~~ie----------~l~eEi~~LkeEn~eLkeLae~~q~l 151 (209)
T 2wvr_A 86 FDLMIK--ENPSSQYWKEVAE--KRRKALYEALKENEKLHKEIE----------QKDNEIARLKKENKELAEVAEHVQYM 151 (209)
T ss_dssp -----C--CSCCTTHHHHHHH--HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhc--CCCcHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455554 3577888877763 333333344444333322110 12333455666666666666666666
Q ss_pred HHHHHHHHHH
Q 019120 155 HQYVETMKTA 164 (346)
Q Consensus 155 He~Ve~lKe~ 164 (346)
.+-|+++...
T Consensus 152 a~vi~~l~~~ 161 (209)
T 2wvr_A 152 AELIERLNGE 161 (209)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhcC
Confidence 6665555444
No 60
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=53.94 E-value=39 Score=34.94 Aligned_cols=27 Identities=11% Similarity=0.325 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+++.+|+.++..+..||++.|..|...
T Consensus 370 ~l~~~F~~~~~~~~~Wl~~~e~~l~~~ 396 (863)
T 1sjj_A 370 HLAEKFRQKASIHESWTDGKEAMLQQK 396 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 567889999999999999999998854
No 61
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=53.49 E-value=1e+02 Score=27.01 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
.+..+|++|...|..+...|++||..|..
T Consensus 152 lld~ivd~y~~~l~~l~~~id~lE~~l~~ 180 (264)
T 3nvo_A 152 VCDALTDHASEFIEELHDKIIDLEDNLLD 180 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667888999999999999999998763
No 62
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=53.15 E-value=14 Score=40.36 Aligned_cols=29 Identities=7% Similarity=0.281 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
.+++.+|..+...+..||+|.|..|...+
T Consensus 885 ~~L~qkF~rka~~~e~Wl~ek~~~l~s~d 913 (1010)
T 1g8x_A 885 AVLLQKYNRILKKLENWATTKSVYLGSNE 913 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 35678999999999999999999988543
No 63
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=53.13 E-value=17 Score=26.04 Aligned_cols=26 Identities=15% Similarity=0.332 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L 114 (346)
|.+++.+|+.-=+..+|-|+.||+++
T Consensus 21 ~ArLlae~~ssq~KlKqRit~lE~~v 46 (46)
T 3swy_A 21 FARLLAEYNATQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66788888888888888888888764
No 64
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=53.02 E-value=65 Score=25.20 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=24.5
Q ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 87 AFLQQTVA-----RFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 87 ~YF~qlV~-----~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
+++.+-|+ +|++-+..|++-||.|-+.|+...
T Consensus 17 ~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~ 53 (93)
T 1wfd_A 17 AVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTK 53 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 44444444 788999999999999999988544
No 65
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.01 E-value=48 Score=27.83 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=28.9
Q ss_pred chhhccCCCCCccHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhcCCC
Q 019120 74 VFDFYRGLPKKPSAFLQQTVA-----RFEKYLGEFRQWIEELEQLILLDPD 119 (346)
Q Consensus 74 v~Dfys~~p~~Ps~YF~qlV~-----~FE~rL~~YRqqIEELE~~L~s~s~ 119 (346)
+.++|... .+|..+-++ +=++-|+.||+-|++||+-|....+
T Consensus 15 ik~~h~~A----F~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 15 IREAYKKA----FLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHH----HHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhcccccc
Confidence 55666654 455554443 3346689999999999999996654
No 66
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=52.75 E-value=17 Score=26.02 Aligned_cols=24 Identities=21% Similarity=0.288 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 92 TVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 92 lV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.++++|+++..++++|++|+..|+
T Consensus 45 ~~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 45 YLQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 378889999999999999988765
No 67
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=52.37 E-value=1.1e+02 Score=25.98 Aligned_cols=27 Identities=4% Similarity=0.148 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
|.+.|++..+.|..++..|++|++.-.
T Consensus 41 F~~~v~~I~~~i~~i~~~v~~l~~~~~ 67 (180)
T 1s94_A 41 FFEQVEEIRAMIDKISDNVDAVKKKHS 67 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556689999999999999999988744
No 68
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=51.96 E-value=87 Score=32.33 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHH
Q 019120 95 RFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHI 142 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq 142 (346)
+|.+++..+..||++.|..|....- + ..+.++...|+++.+
T Consensus 489 ~f~~~a~~~~~Wl~~~e~~l~~~~~--g-----~dl~~ve~ll~kh~~ 529 (863)
T 1sjj_A 489 EYAKRAAPFNNWMEGAMEDLQDTFI--V-----HTIEEIQGLTTAHEQ 529 (863)
T ss_dssp HHHHHTTTTHHHHHHHHHHHHCCCC--C-----SSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHh--h-----ccHHHHHHHHHHHHH
Confidence 5555555677789999988874432 1 224555555554443
No 69
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=51.05 E-value=1.1e+02 Score=25.48 Aligned_cols=105 Identities=10% Similarity=0.131 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHhhchHHHHHHhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhccCCCCCccH
Q 019120 8 LQERMAVVKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGLPKKPSA 87 (346)
Q Consensus 8 ~~~l~~~V~~~lrntE~Avrs~~~lr~rf~~~~~~~~~~~~~~~~~~g~~~~~~~~~qp~~~~~~pv~Dfys~~p~~Ps~ 87 (346)
-+++.+..++.|-|.=.++.-|+ -.|+. +.|+
T Consensus 11 ~~~vi~~Ln~~La~~~~~~~q~~-----~~hw~-------------------------------------v~G~------ 42 (156)
T 2fjc_A 11 IAAICEQLRQHVADLGVLYIKLH-----NYHWH-------------------------------------IYGI------ 42 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHH-------------------------------------EEST------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----hhhhh-------------------------------------eECC------
Confidence 45566777888888888887665 34554 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCCC--------CCc--cccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSSS--------HGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S~--------~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+. +.. ....+....|+.+-+.+..+...+..+.+
T Consensus 43 ~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 122 (156)
T 2fjc_A 43 EFKQVHELLEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALARVKRDFEYLSTRFSQTQV 122 (156)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999999988 55555544332210 000 01134556666666655555555555554
Q ss_pred HHHH
Q 019120 157 YVET 160 (346)
Q Consensus 157 ~Ve~ 160 (346)
..++
T Consensus 123 ~a~~ 126 (156)
T 2fjc_A 123 LAAE 126 (156)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4433
No 70
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=50.98 E-value=1.1e+02 Score=25.64 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCcc--ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSS--LLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs~--tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .++.. ...++...|+.+-+.+..+...+..+.+
T Consensus 48 ~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 127 (161)
T 2z90_A 48 NFRDLHLQLDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVVDLITTRINATVDTIRRVHD 127 (161)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677889999999999999988 5555555543331 11110 0245677777777777777666666665
Q ss_pred HHHHH
Q 019120 157 YVETM 161 (346)
Q Consensus 157 ~Ve~l 161 (346)
..++.
T Consensus 128 ~a~~~ 132 (161)
T 2z90_A 128 AVDAE 132 (161)
T ss_dssp HHHHH
T ss_pred HhcCC
Confidence 55443
No 71
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=50.81 E-value=62 Score=25.11 Aligned_cols=56 Identities=20% Similarity=0.304 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
.+|++-+..|++-||.+-..++...+ +..-..+-+++.+|. .|++.|.+.|+..|+
T Consensus 30 g~y~eAl~lY~~Aie~ll~alk~e~d----------~~~k~~lr~K~~eYl----~RAE~LK~~l~~~k~ 85 (86)
T 4a5x_A 30 SRYPQALVCYQEGIDLLLQVLKGTKD----------NTKRCNLREKISKYM----DRAENIKKYLDQEKE 85 (86)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTCCC----------HHHHHHHHHHHHHHH----HHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCC----------HHHHHHHHHHHHHHH----HHHHHHHHHHHhhhc
Confidence 46899999999999999988874432 111122222333333 466777777776664
No 72
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=50.27 E-value=91 Score=29.33 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+..+|++|..-+..+...||+||..|..
T Consensus 186 ld~ivd~y~~~l~~l~~~id~lE~~v~~ 213 (363)
T 2iub_A 186 IDALVDDYFVLLEKIDDEIDVLEEEVLE 213 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3467788999999999999999998764
No 73
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=50.23 E-value=68 Score=26.89 Aligned_cols=24 Identities=21% Similarity=0.434 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+.+|...+.....||++.|..+..
T Consensus 111 l~qf~~~~~~~~~Wl~e~e~~~~~ 134 (216)
T 1u5p_A 111 LHQFFRDMDDEESWIKEKKLLVSS 134 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhHHHHHHHHhcC
Confidence 345777788888899999987653
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=50.09 E-value=1.8e+02 Score=27.87 Aligned_cols=72 Identities=10% Similarity=-0.009 Sum_probs=53.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 84 ~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
-+..|..+.+.++|+-.++....+|.+++.+. .+...++++-+-+..+.-.++.+..++++.++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (487)
T 3oja_A 407 SPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWD----------------MYQHKETQLAEENARLKKLNGEADLALASANA 470 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcchhhhh----------------hhhhHHHHHHHHhhhhhhhhhhhhhhhHhccc
Confidence 34678888888888877776666666555544 33556666777777888888999999999999
Q ss_pred HHHHHHHh
Q 019120 164 AYLADQRR 171 (346)
Q Consensus 164 ~YL~~~Rr 171 (346)
.|.+..++
T Consensus 471 ~~~~~~~~ 478 (487)
T 3oja_A 471 TLQELVVR 478 (487)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987764
No 75
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=49.69 E-value=32 Score=29.77 Aligned_cols=26 Identities=12% Similarity=0.314 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
..+|.+.+..+..||++.|..|....
T Consensus 22 a~~~~~~~~~l~~Wl~e~e~~l~s~d 47 (224)
T 2iak_A 22 EEVNMKFVQDLLNWVDEMQVQLDRTE 47 (224)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34555568888899999999988543
No 76
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=49.41 E-value=27 Score=35.42 Aligned_cols=23 Identities=9% Similarity=0.153 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHH
Q 019120 5 KAQLQERMAVVKDMLRNTEIAVR 27 (346)
Q Consensus 5 k~~~~~l~~~V~~~lrntE~Avr 27 (346)
+..|++|...|.++-..|-.|-.
T Consensus 94 ~~dl~~Le~~l~~isn~Ts~a~~ 116 (461)
T 3ghg_B 94 RNSVDELNNNVEAVSQTSSSSFQ 116 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHhhhHHHHH
Confidence 34567777766666666655553
No 77
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus}
Probab=49.27 E-value=56 Score=28.93 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+..+|++|..-|..+...||+||..|..
T Consensus 178 ld~ivd~y~~~l~~i~~~id~lE~~l~~ 205 (266)
T 2hn1_A 178 LDAVVDSYFEALLKISDEIEVLEDEVVS 205 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5578899999999999999999999863
No 78
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=49.26 E-value=43 Score=24.80 Aligned_cols=24 Identities=8% Similarity=0.155 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQ 112 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~ 112 (346)
|.+..+++++.|...++.|+.|..
T Consensus 21 ~~~~~~~i~~~l~~L~~~v~~L~~ 44 (99)
T 3zbh_A 21 YNVESSNVTELIARLDQMSHTLQG 44 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445555555555555555443
No 79
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=48.99 E-value=38 Score=27.35 Aligned_cols=30 Identities=20% Similarity=0.093 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
+++-|.++++.|+.-.+..|=||+....+.
T Consensus 20 L~~Ki~el~~ei~ke~~~regl~Km~~vY~ 49 (98)
T 2ke4_A 20 LQQQLEERSRELQKEVDQREALKKMKDVYE 49 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556666666666666666666655443
No 80
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=48.53 E-value=29 Score=32.93 Aligned_cols=41 Identities=10% Similarity=0.035 Sum_probs=12.5
Q ss_pred cccHHHHHHHHHHHHHHH---------HHHHHHH--HHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHV---------AAKAESI--HQYVETMKTAYLADQR 170 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaL---------AArva~L--He~Ve~lKe~YL~~~R 170 (346)
.+.+...|+.+++.|+.. .+.-..+ -|+|...-|.||+.|.
T Consensus 255 ~~~~V~~LE~~~D~~~~~~~~~~~~~~~~~~~~~ps~d~i~~efE~fL~~~~ 306 (319)
T 2p90_A 255 IQRVVGALEQQYDSELERYRNRHPQAVMPGESELPSGDEIGAEFEKFLADLD 306 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--------------------------------
T ss_pred HHHHHHHHHhhhhhhhhhhcccccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 344557888999998732 1122223 4667788888998664
No 81
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=48.25 E-value=21 Score=24.13 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 133 LPQVISNVHIFFVHVAAKAESIHQYVETMK 162 (346)
Q Consensus 133 L~~~L~~~hq~FvaLAArva~LHe~Ve~lK 162 (346)
|...+..+.+.|+-|-=+|..|.|+|..+|
T Consensus 6 lkekvsalkeqflmlmfkvsalkekvsalk 35 (36)
T 3tq2_A 6 LKEKVSALKEQFLMLMFKVSALKEKVSALK 35 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444555555555555555555555555444
No 82
>3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A
Probab=48.00 E-value=1e+02 Score=27.07 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHhh
Q 019120 100 LGEFRQWIEELEQLIL 115 (346)
Q Consensus 100 L~~YRqqIEELE~~L~ 115 (346)
+..|-.-+|+||..+-
T Consensus 157 vd~y~~~l~~l~~~id 172 (264)
T 3nvo_A 157 TDHASEFIEELHDKII 172 (264)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555666666655
No 83
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=47.72 E-value=17 Score=31.19 Aligned_cols=22 Identities=18% Similarity=0.151 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 019120 93 VARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L 114 (346)
+.+|..++.....||++.|..|
T Consensus 110 ~~~F~~~~~e~~~Wl~ek~~~l 131 (218)
T 3edu_A 110 LHRYFYTGAEILGLIDEKHREL 131 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 3466667777777888888776
No 84
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=47.67 E-value=24 Score=27.67 Aligned_cols=27 Identities=15% Similarity=0.418 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
|.+|+.+|+.-=+..||.|..||+.|.
T Consensus 23 fARLLaEy~ssQ~KLKqRit~LE~~~~ 49 (74)
T 3swf_A 23 FARILAEYESMQQKLKQRLTKVEKFLK 49 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 678888888888888999999999887
No 85
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=47.46 E-value=37 Score=25.04 Aligned_cols=74 Identities=11% Similarity=0.069 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAY 165 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~Y 165 (346)
-|.....+++..|...++.|+.|...-.-... .. . ....+.+...+.++++.+..++..|...++..++.-+..
T Consensus 17 ~~~~~~~~l~~~l~~L~~~~~~L~~~W~G~a~--~a-f-~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~y~~~d~~~ 90 (97)
T 2vs0_A 17 SYGQGSDQIRQILSDLTRAQGEIAANWEGQAF--SR-F-EEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQL 90 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTT--HH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH--HH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777777777654331110 00 0 013455667777777777777777777777766554443
No 86
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=47.41 E-value=61 Score=24.25 Aligned_cols=69 Identities=9% Similarity=0.051 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
|.+..+++++.|...++.|+.|...-.=.+. .. . ....+.+...+.++.+.+..++..|..+.+..++.
T Consensus 20 ~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~--~a-F-~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~ 88 (98)
T 3gwk_C 20 YTAGSQQVTEVLNLLTQEQAVIDENWDGSTF--DS-F-EAQFNELSPKITEFAQLLEDINQQLLKVADIIEQT 88 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHBCSSTT--HH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCcHHH--HH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666666666666665554331110 00 0 01234445555555555555555555555544443
No 87
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=47.28 E-value=19 Score=28.04 Aligned_cols=23 Identities=30% Similarity=0.290 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 019120 93 VARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~ 115 (346)
|.+.|+.|..||.-|..||+-|.
T Consensus 28 vgdiEqeLe~Ck~sIrrLE~evn 50 (72)
T 1k1f_A 28 VGDIEQELERAKASIRRLEQEVN 50 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999765
No 88
>1gl2_B Syntaxin 7; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Mus musculus} SCOP: h.1.15.1
Probab=47.13 E-value=36 Score=24.98 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=21.0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~ 164 (346)
+++|...+..|-+..-.+-..|...+++|+....+
T Consensus 25 F~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~e 59 (65)
T 1gl2_B 25 FKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQ 59 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666666666666665555443
No 89
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=46.95 E-value=87 Score=29.03 Aligned_cols=72 Identities=10% Similarity=0.105 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~ 164 (346)
|-.+-++++++.+..++.-++.|++...... .. . .....++...+..+.+-...+..++..|.++++++++.
T Consensus 57 ~~~~~~~~~~~~~~k~~~~~~~L~~~~~~~~---~~-~-~~~~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~ 128 (357)
T 3rrk_A 57 TEEAELKRWEAVVSQAEQSLTVVGLATVPSS---KP-F-TGSLEEAEAVLRPVASRAEVLGKERAALEEEIQTIELF 128 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCS---SC-C-CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHhHHHHHHHHHHHHHHHhcccccccc---cC-C-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 4445567777777777777777664321110 01 0 01245566667777777777778888888887777765
No 90
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=46.40 E-value=1.5e+02 Score=26.14 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccc-cHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQ-SLPQVISNVHIFFVHVAAKAESIH 155 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ-~L~~~L~~~hq~FvaLAArva~LH 155 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+.. ...- ++...|+.+-+.+..+...+..+.
T Consensus 73 ~F~~LH~~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re~i 152 (199)
T 2xgw_A 73 GFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGL 152 (199)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36677899999999999999988 5555555443321 0000 0011 455666666666666655555555
Q ss_pred HHHHH
Q 019120 156 QYVET 160 (346)
Q Consensus 156 e~Ve~ 160 (346)
+..++
T Consensus 153 ~~aee 157 (199)
T 2xgw_A 153 DITDE 157 (199)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 91
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=45.68 E-value=15 Score=24.77 Aligned_cols=21 Identities=19% Similarity=0.283 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 019120 150 KAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 150 rva~LHe~Ve~lKe~YL~~~R 170 (346)
+|..|.|+|..+||+||-++=
T Consensus 2 kvsalkekvsalkeqflmlmf 22 (36)
T 3tq2_A 2 KVSALKEKVSALKEQFLMLMF 22 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHH
Confidence 577899999999999998763
No 92
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=45.63 E-value=1.1e+02 Score=24.25 Aligned_cols=25 Identities=36% Similarity=0.450 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
++|.+.|..|.+...-|++||.-++
T Consensus 38 ~~i~~ie~~l~EA~ell~qMelE~r 62 (102)
T 1vcs_A 38 QMVANVEKQLEEARELLEQMDLEVR 62 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666677777767776666665
No 93
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=45.52 E-value=43 Score=33.36 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=15.6
Q ss_pred ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 131 QSLPQVISNVHIFFV-HVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 131 Q~L~~~L~~~hq~Fv-aLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
..+..-|++.+.|+- .|-.+|..|+.--..+++++.+..|
T Consensus 112 ~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqR 152 (390)
T 1deq_A 112 KQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKR 152 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 334444444444432 2333333333333333444444444
No 94
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=45.13 E-value=1.1e+02 Score=24.06 Aligned_cols=27 Identities=11% Similarity=0.265 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
|.+-|++....|..++..|++|...-.
T Consensus 10 F~~~v~~I~~~i~~i~~~v~~l~~~~~ 36 (127)
T 1ez3_A 10 FFEQVEEIRGFIDKIAENVEEVKRKHS 36 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445589999999999999999976533
No 95
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=44.83 E-value=25 Score=32.23 Aligned_cols=81 Identities=11% Similarity=0.167 Sum_probs=30.5
Q ss_pred hHHHHHHhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhccCCCCCccHHHHHHHHHHHHHHH
Q 019120 22 TEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGLPKKPSAFLQQTVARFEKYLG 101 (346)
Q Consensus 22 tE~Avrs~~~lr~rf~~~~~~~~~~~~~~~~~~g~~~~~~~~~qp~~~~~~pv~Dfys~~p~~Ps~YF~qlV~~FE~rL~ 101 (346)
+|..|+.|..=.|-|+.+...-...- +.|++- ..+|.=-|-+|.
T Consensus 32 ~~~~V~~yL~~~PdFf~~~~~Ll~~L-----------------------------------~lph~~-~~aVSL~erQ~~ 75 (252)
T 3e98_A 32 DAEQVAAYLSQHPEFFVEHDELIPEL-----------------------------------RIPHQP-GDAVSLVERQVR 75 (252)
T ss_dssp -----------------------------------------------------------------------CHHHHHHHH
T ss_pred CHHHHHHHHHhCCHHHhhCHHHHHhC-----------------------------------CCCCCC-CCcccHHHHHHH
Confidence 46678889888899988873211111 112221 244667788899
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHH
Q 019120 102 EFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHV 147 (346)
Q Consensus 102 ~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaL 147 (346)
..|+.|++||..|...-. ...+-..+.+++|+.-++|
T Consensus 76 ~LR~r~~~Le~~L~~Li~---------~A~~Ne~l~~~~~~l~l~L 112 (252)
T 3e98_A 76 LLRERNIEMRHRLSQLMD---------VARENDRLFDKTRRLVLDL 112 (252)
T ss_dssp HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Confidence 999999999998872211 1233455566666655554
No 96
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=44.75 E-value=76 Score=31.57 Aligned_cols=67 Identities=7% Similarity=0.043 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Q 019120 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQ------YVETMKTAYLAD 168 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe------~Ve~lKe~YL~~ 168 (346)
..+..+..||+|+|..|.+.. .+.+ ..+.+.|-..-+.++.-....+.+|..|.+ +++.+...|-++
T Consensus 9 r~v~dl~~Wl~E~~~~L~S~d--~GkD--L~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L 81 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDMVA--WGVD--LASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENL 81 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSCC--CCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCccc--cCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Confidence 345667789999999987543 2211 112333333333444444455556666553 345555555443
No 97
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=44.72 E-value=55 Score=31.53 Aligned_cols=15 Identities=7% Similarity=0.140 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHH
Q 019120 148 AAKAESIHQYVETMK 162 (346)
Q Consensus 148 AArva~LHe~Ve~lK 162 (346)
..+|++|.++|.+++
T Consensus 39 ~~~i~~l~~~i~~l~ 53 (323)
T 1lwu_C 39 QQFVTRLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 98
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=44.51 E-value=70 Score=28.47 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+.+|...+.....||++.|..|..
T Consensus 6 ~qqf~~~~~el~~Wl~e~~~~l~~ 29 (326)
T 3kbt_A 6 AQQYYLDADEAEAWIGEQELYVIS 29 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 678999999999999999998764
No 99
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=44.44 E-value=64 Score=31.70 Aligned_cols=22 Identities=27% Similarity=0.158 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 019120 94 ARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+.||+.|.+.++++++||+.++
T Consensus 6 ~~l~~el~~~~~~~~~l~~~~~ 27 (412)
T 3u06_A 6 AALSTEVVHLRQRTEELLRCNE 27 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888888888887766
No 100
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=44.38 E-value=1.1e+02 Score=27.36 Aligned_cols=71 Identities=8% Similarity=0.066 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+.. ....++...|+.+-+.+..+...+..+.+
T Consensus 77 ~F~~LHe~fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~ 156 (211)
T 2c2j_A 77 LWYTLHELLQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGFLDDAQVIQFFTYQYETVGQRIHQRVG 156 (211)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCSCCCCCSCEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999988 5555554433221 0000 00124556666666655555555555544
Q ss_pred HH
Q 019120 157 YV 158 (346)
Q Consensus 157 ~V 158 (346)
..
T Consensus 157 ~a 158 (211)
T 2c2j_A 157 DV 158 (211)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 101
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=44.37 E-value=1.2e+02 Score=26.15 Aligned_cols=70 Identities=7% Similarity=0.125 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+.. ....++...|+.+-+.+..+...+..+.+
T Consensus 46 ~F~~lh~~~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 125 (183)
T 2yw6_A 46 NFIGVHEMIDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLAALDLVYNGVIEDTRKSIE 125 (183)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999999988 5555555443321 0000 01134566666666555555555554444
Q ss_pred H
Q 019120 157 Y 157 (346)
Q Consensus 157 ~ 157 (346)
.
T Consensus 126 ~ 126 (183)
T 2yw6_A 126 K 126 (183)
T ss_dssp H
T ss_pred H
Confidence 3
No 102
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=44.09 E-value=39 Score=25.68 Aligned_cols=31 Identities=10% Similarity=0.157 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
++++-+.++++.+...++++++|++.|....
T Consensus 51 ~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 51 YMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6677788899999999999999999988544
No 103
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=43.94 E-value=1.3e+02 Score=24.56 Aligned_cols=23 Identities=9% Similarity=0.297 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 019120 95 RFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+|++-+..|++-||.|-+.|+..
T Consensus 33 ~y~eAl~lY~~Aie~l~~alk~e 55 (117)
T 2cpt_A 33 NYEEALQLYQHAVQYFLHVVKYE 55 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc
Confidence 67788888999999888888744
No 104
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=43.91 E-value=1.5e+02 Score=25.22 Aligned_cols=73 Identities=10% Similarity=0.150 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccc-cHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQ-SLPQVISNVHIFFVHVAAKAESIH 155 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ-~L~~~L~~~hq~FvaLAArva~LH 155 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+.. ...- ++...|+.+-+.+..+...+..+.
T Consensus 57 ~f~~lh~~~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i 136 (175)
T 2wlu_A 57 GFLYLHPKMDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGL 136 (175)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36677889999999999999988 5555555443321 0000 0011 556666666666666655555555
Q ss_pred HHHHH
Q 019120 156 QYVET 160 (346)
Q Consensus 156 e~Ve~ 160 (346)
+..++
T Consensus 137 ~~ae~ 141 (175)
T 2wlu_A 137 DITDE 141 (175)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 105
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=43.88 E-value=1.4e+02 Score=24.81 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS-SLLQSLPQVISNVHIFFVHVAAKAESIHQYV 158 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs-~tpQ~L~~~L~~~hq~FvaLAArva~LHe~V 158 (346)
|..+-..||+...+...++++| ||.+.+...++.+ .+.. ....+....|+.+-+.+..+...+..+++..
T Consensus 49 F~~lH~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~a 128 (159)
T 3iq1_A 49 FFELHAKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQIKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELA 128 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567889999999999999998 5555544433221 0100 0123556666666666666666666655554
Q ss_pred HHH
Q 019120 159 ETM 161 (346)
Q Consensus 159 e~l 161 (346)
++.
T Consensus 129 e~~ 131 (159)
T 3iq1_A 129 GET 131 (159)
T ss_dssp HHH
T ss_pred hHc
Confidence 443
No 106
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=43.87 E-value=51 Score=26.35 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=16.6
Q ss_pred chhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 74 VFDFYRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQ 112 (346)
Q Consensus 74 v~Dfys~~p~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~ 112 (346)
..|-++. ..|++.||++|.. +|=......++|-++
T Consensus 16 aeDL~~~--e~Pse~YWk~lAE--~RR~AL~eaL~EN~~ 50 (83)
T 1uii_A 16 SFDLMIK--ENPSSQYWKEVAE--KRRKALYEALKENEK 50 (83)
T ss_dssp ---------CCHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHhc--CCChHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 3455544 4788888888873 444444444444433
No 107
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=43.66 E-value=1.3e+02 Score=24.57 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~ 164 (346)
+.+|...+.+...||.|-|..+...+ .. .+..|...+ ..|+.|.. .|+..++.|+.+.+.
T Consensus 48 l~~F~~d~~el~~Wi~ek~~~~~~~~---~~-----d~~~v~~~l-~kH~afe~---El~a~~~~l~~v~~~ 107 (149)
T 3f31_A 48 FQFFQRDAEELEKWIQEKLQIASDEN---YK-----DPTNLQGKL-QKHQAFEA---EVQANSGAIVKLDET 107 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCS---SC-----SSSCHHHHH-HHHHHHHH---HHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcc---cC-----CHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHH
Confidence 57888899999999999998754322 11 144555544 45666653 344444444444443
No 108
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=43.39 E-value=47 Score=29.63 Aligned_cols=22 Identities=14% Similarity=0.172 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 019120 93 VARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L 114 (346)
+.+|..++.....||++.|..|
T Consensus 115 ~~~f~~~~~e~~~Wl~~k~~~l 136 (323)
T 3edv_A 115 LHKFYHDAKEIFGRIQDKHKKL 136 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 3467777888888999888776
No 109
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=43.34 E-value=1.3e+02 Score=24.50 Aligned_cols=76 Identities=13% Similarity=0.064 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC---------Cc-cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSH---------GS-SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~---------gs-~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
=|..+-+.||++..+-+.++++|=..|...++...... .. ....++...|+.+.+.+..+...+..+.+.
T Consensus 40 ~f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~ 119 (158)
T 2c41_A 40 LFRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVTPSSGQLTVKQMIEEAIANHELIITEMHQDAEI 119 (158)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667899999999999999998666664443222110 00 113467778888877777777777777766
Q ss_pred HHHHHH
Q 019120 158 VETMKT 163 (346)
Q Consensus 158 Ve~lKe 163 (346)
.++.+|
T Consensus 120 a~~~~D 125 (158)
T 2c41_A 120 ATEAGD 125 (158)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 555433
No 110
>2v7k_A PRNB; IDO, TDO, biosynthetic protein; HET: HEM DTR; 1.70A {Pseudomonas fluorescens} PDB: 2v7j_A* 2v7i_A* 2v7l_A* 2v7m_A* 2x66_A* 2x67_A* 2x68_A*
Probab=43.22 E-value=56 Score=31.78 Aligned_cols=103 Identities=10% Similarity=-0.006 Sum_probs=59.0
Q ss_pred CcccchhhccCCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCCCCCccccccHHHH-----------H
Q 019120 70 SVVPVFDFYRGLPKKPSAFLQQTVARFEKYLGE-FRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQV-----------I 137 (346)
Q Consensus 70 ~~~pv~Dfys~~p~~Ps~YF~qlV~~FE~rL~~-YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~-----------L 137 (346)
++.| +|-+.|+.+.|.+.+.+.+++|..+|-. .|+-|+.+|++- + +.+.... .
T Consensus 228 sli~-lD~~LGi~h~~~~~~~~fL~emr~YMP~~HR~FL~~l~~~~---s-----------ir~~v~~~~~~~~~~~~~~ 292 (361)
T 2v7k_A 228 PLFV-LEHVLWGSQSDDQTYREFKETYLPYVLPAYRAVYARFSGEP---A-----------LIDRALDEARAVGTRDEHV 292 (361)
T ss_dssp THHH-HHHHHTTTTCCCHHHHHHHHHHGGGSCHHHHHHHHHHHTSC---C-----------HHHHHHHHHHHHCTTSHHH
T ss_pred hHHH-HHHHhCCCCCCCchHHHHHHHHHhcCCHHHHHHHHHHHhcC---c-----------HHHHHHhhcccccccCchH
Confidence 5667 9999999999998888888888888854 677777777641 0 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-----hcCCCCCccchhhHHHHH
Q 019120 138 SNVHIFFVHVAAKAESIHQY-VETMKTAYLADQR-----RRGDGSDPFLEADRRETA 188 (346)
Q Consensus 138 ~~~hq~FvaLAArva~LHe~-Ve~lKe~YL~~~R-----r~GD~~DPFaEadr~Eaa 188 (346)
..+-..|..+-..+...-++ ++..+..|+..+. --|..= ||+..-|.++.
T Consensus 293 ~~l~~ay~~~v~~l~~fR~~H~~iV~~~YIv~~s~~~~GTGGt~l-~fLk~~rd~T~ 348 (361)
T 2v7k_A 293 RAGLTALERVFKVLLRFRAPHLKLAERAYEVGQSGPEIGSGGYAP-SMLGELLTLTY 348 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------------CC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCCCCCCCCCCCH-HHHHHHHHHHH
Confidence 23344455544444444444 3444444776654 244556 88877776664
No 111
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=42.71 E-value=1.5e+02 Score=24.94 Aligned_cols=28 Identities=11% Similarity=0.310 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
|.+.|++....|..++..|.+|++....
T Consensus 7 f~~~~~~i~~~i~~i~~~v~~L~~l~~~ 34 (196)
T 1fio_A 7 FMNKISQINRDLDKYDHTINQVDSLHKR 34 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677999999999999999999998663
No 112
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=42.54 E-value=1.1e+02 Score=31.76 Aligned_cols=17 Identities=12% Similarity=0.356 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 019120 96 FEKYLGEFRQWIEELEQ 112 (346)
Q Consensus 96 FE~rL~~YRqqIEELE~ 112 (346)
|.++|..+|+++|+|++
T Consensus 62 ltkrINELKnqLEdlsK 78 (562)
T 3ghg_A 62 FTNRINKLKNSLFEYQK 78 (562)
T ss_dssp HHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44455555555555544
No 113
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=42.50 E-value=1.3e+02 Score=24.07 Aligned_cols=78 Identities=8% Similarity=0.060 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA---------AKAESIHQYVETMKT 163 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA---------Arva~LHe~Ve~lKe 163 (346)
+.+.-..|...+..++-|...|....-++.........++|-...+.++..++.|+ +++=.++|.|..+-+
T Consensus 8 ~~k~~~el~~v~~n~~lL~EML~~~~p~~~~~~~~el~~eL~~~c~~~qp~i~~li~~~~dee~l~~lL~~ND~L~~vl~ 87 (103)
T 1wrd_A 8 IGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNVFL 87 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHhhHHHHHHHH
Confidence 55666777888888888888887553211111111356788888888898888887 445555666666666
Q ss_pred HHHHHHH
Q 019120 164 AYLADQR 170 (346)
Q Consensus 164 ~YL~~~R 170 (346)
.|-.+-+
T Consensus 88 ry~~~~~ 94 (103)
T 1wrd_A 88 RHERFER 94 (103)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 6655544
No 114
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=42.38 E-value=1.6e+02 Score=25.11 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHH-------------HHHHHH
Q 019120 92 TVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAE-------------SIHQYV 158 (346)
Q Consensus 92 lV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva-------------~LHe~V 158 (346)
...+|..+|..+.+.|..+-+.|...+. ..|.+|...-.++-..|..||...- +|...|
T Consensus 13 sfvdYQt~m~~~~K~iA~~aqemv~ks~--------~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~V 84 (137)
T 2b0h_A 13 SFVDYQTTMVRTAKAIAVTVQEMVTKSN--------TSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRV 84 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT--------TCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcccC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 5679999999999999999999875542 2378889888888888888876543 344444
Q ss_pred HHHHH---HHHHHHH-hcCCCCCccch
Q 019120 159 ETMKT---AYLADQR-RRGDGSDPFLE 181 (346)
Q Consensus 159 e~lKe---~YL~~~R-r~GD~~DPFaE 181 (346)
.++=. .-.+.-. ...|+.|.|..
T Consensus 85 q~LG~ac~~lV~~ag~~q~~p~d~~~q 111 (137)
T 2b0h_A 85 QELGHGCSALVTKAGALQCSPSDVYTK 111 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhHHHHHHHHHHhhccCCcccHHHH
Confidence 44422 2222222 35577888843
No 115
>2d4x_A Flagellar HOOK-associated protein 3; multi-domain protein, alpha-helical bundle, complex all- beta folds, structural protein; 1.90A {Salmonella typhimurium}
Probab=41.66 E-value=67 Score=28.46 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH
Q 019120 97 EKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 97 E~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe~YL~~~R 170 (346)
...|.+|.+.|.+....|+... ..+..+..+|+++.+..|+.+ ...+.|.++|+.++++.+..--
T Consensus 18 ~~~l~q~~~n~~~~~s~l~~ae---------~aL~~i~~~l~r~rel~vqa~ngt~s~~dr~~i~~e~~~l~~~i~~~an 88 (248)
T 2d4x_A 18 QAQNSQYALARTFATQKVSLEE---------SVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLMNLAN 88 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3455667777777777776332 247788999999999998764 5677788888888888777655
Q ss_pred h-cCCCCCccc
Q 019120 171 R-RGDGSDPFL 180 (346)
Q Consensus 171 r-~GD~~DPFa 180 (346)
. -.+.+..|.
T Consensus 89 ~~~~nG~~lf~ 99 (248)
T 2d4x_A 89 STDGNGRYIFA 99 (248)
T ss_dssp CBCTTSCBTTS
T ss_pred cCCCCCceeec
Confidence 3 245556663
No 116
>2d0t_A Indoleamine 2,3-dioxygenase; helix bundle, riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: HEM PIM NHE; 2.30A {Homo sapiens} SCOP: a.266.1.2 PDB: 2d0u_A*
Probab=41.54 E-value=38 Score=33.29 Aligned_cols=42 Identities=26% Similarity=0.456 Sum_probs=26.5
Q ss_pred CcccchhhccCCCCCc---cHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 019120 70 SVVPVFDFYRGLPKKP---SAFLQQTVARFEKYL-GEFRQWIEELEQL 113 (346)
Q Consensus 70 ~~~pv~Dfys~~p~~P---s~YF~qlV~~FE~rL-~~YRqqIEELE~~ 113 (346)
++.+.+|++.|+.+.+ .+ .+..++|.++| ..||.-|+.|+++
T Consensus 271 sl~~~lD~~LGi~~~~~~~~~--~~fl~~mr~ymP~~hr~fL~~l~~~ 316 (406)
T 2d0t_A 271 SVFQCFDVLLGIQQTAGGGHA--AQFLQDMRRYMPPAHRNFLCSLESN 316 (406)
T ss_dssp HHHHHHHHHTTCCSSCSSSHH--HHHHHHHGGGSCHHHHHHHHHHHTS
T ss_pred hHHHHHHHHhCCCCccccCCh--HHHHHHHHhhCCchHHHHHHHHHhc
Confidence 5668999999997666 43 23333344433 3467777777764
No 117
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=41.42 E-value=1.6e+02 Score=25.85 Aligned_cols=53 Identities=9% Similarity=0.109 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES 153 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~ 153 (346)
..+|..+|..+.+.|..+-+.|-..+. ..|.+|...-.++-..|..||...-.
T Consensus 42 f~dYQt~m~~~~K~iA~~aq~mv~k~~--------~~p~eL~~la~~it~~y~~La~~~~~ 94 (165)
T 2kvp_A 42 FVDYQTTMVRTAKAIAVTVQEMVTKSN--------TSPEELGPLANQLTSDYGRLASQAKP 94 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccC--------CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999998864432 23789999999999999988876543
No 118
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=41.25 E-value=1.3e+02 Score=25.79 Aligned_cols=69 Identities=14% Similarity=0.152 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHH
Q 019120 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES---------------IHQYVETMK 162 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~---------------LHe~Ve~lK 162 (346)
.++..+..||+|.+..|.+..-+.-- .+.+.+-..-+.++.-+..-..+|.. |+++++.+.
T Consensus 12 r~~~dl~~Wl~e~~~~l~s~d~G~Dl----~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~ 87 (210)
T 3pdy_A 12 RYLQDLLAWVEENQHRVDGAEWGVDL----PSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLD 87 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCSSH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHH
Q ss_pred HHHHHHHH
Q 019120 163 TAYLADQR 170 (346)
Q Consensus 163 e~YL~~~R 170 (346)
+.|-++++
T Consensus 88 ~~~~~L~~ 95 (210)
T 3pdy_A 88 LQYAKLLN 95 (210)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
No 119
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=40.23 E-value=58 Score=29.06 Aligned_cols=51 Identities=14% Similarity=0.192 Sum_probs=33.6
Q ss_pred ccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhc-----CCCCCcc
Q 019120 129 LLQSLPQVISNVHIFFVHVA---AKAESIHQYVETMKTAYLADQRRR-----GDGSDPF 179 (346)
Q Consensus 129 tpQ~L~~~L~~~hq~FvaLA---Arva~LHe~Ve~lKe~YL~~~Rr~-----GD~~DPF 179 (346)
.+.+|-.++.++....-++. ..+..|++.|+....++++.-.++ +-.-+||
T Consensus 91 ~~~~LLpv~DnlerAl~~~~~~~~~~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~F 149 (197)
T 1dkg_A 91 FINELLPVIDSLDRALEVADKANPDMSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPL 149 (197)
T ss_dssp HHHHSHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBC
T ss_pred HHHHHHHHHhHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 45667777777777765431 125678888888888888876643 3445778
No 120
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=40.01 E-value=1.1e+02 Score=30.31 Aligned_cols=25 Identities=12% Similarity=0.040 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHhh
Q 019120 6 AQLQERMAVVKDMLRNTEIAVRSFM 30 (346)
Q Consensus 6 ~~~~~l~~~V~~~lrntE~Avrs~~ 30 (346)
..|++|.+.|+++=.-++.+-+.-.
T Consensus 38 ~~l~~LE~~l~elsn~ts~v~~Lvk 62 (409)
T 1m1j_C 38 GELLEIEGLLQQATNSTGSIEYLIQ 62 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667776666666666666554443
No 121
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=39.93 E-value=1.4e+02 Score=23.65 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
++.+++|.+++.--..|.-|.--+. +|...-..+.+---.+.+..+.|.++++.+|+..-++..
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEie----------------ELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~ 69 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIE----------------ELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQE 69 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 6778888888777666655443322 334444444444445556666688888888888877664
No 122
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=39.54 E-value=2e+02 Score=25.45 Aligned_cols=24 Identities=21% Similarity=0.441 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 92 TVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 92 lV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
-+.+|...+..+..||++.|..+.
T Consensus 7 ~l~~f~~~~~~l~~Wl~~~e~~l~ 30 (323)
T 3edv_A 7 RLFQLNREVDDLEQWIAEREVVAG 30 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 357899999999999999999886
No 123
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=39.12 E-value=1.8e+02 Score=27.43 Aligned_cols=87 Identities=7% Similarity=-0.020 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRRG 173 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~G 173 (346)
..|...+..+..||.+.|..|....- .+ +.++...|++ |+.|. ..|...+..|+.+.+..-.+... .
T Consensus 370 ~~F~~~a~~~~~Wl~e~e~~l~~~~~---~~-----~~~le~~l~~-~~~~~---~el~~~~~~~~~l~~~~~~l~~~-~ 436 (476)
T 1hci_A 370 RQFAAQANAIGPWIQNKMEEIARSSI---QI-----TGALEDQMNQ-LKQYE---HNIINYKNNIDKLEGDHQLIQEA-L 436 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCSC---TT-----TTSTHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc---CC-----CCCHHHHHHH-HHHHH---HHHHHHHhhHHHHHHHHHHHHHh-c
Confidence 36777777788899999999874321 11 2234444422 23333 34445555555555443333332 1
Q ss_pred CCCCccchhhHHHHHHHHHH
Q 019120 174 DGSDPFLEADRRETARQEAA 193 (346)
Q Consensus 174 D~~DPFaEadr~Eaa~q~~a 193 (346)
...||+.+.....-+.+|..
T Consensus 437 ~~~~~~~~~~~~~l~~~W~~ 456 (476)
T 1hci_A 437 VFDNKHTNYTMEHIRVGWEL 456 (476)
T ss_dssp CCCCTTCSCHHHHHHHHHHH
T ss_pred ccCCCcchhhHHHHHHHHHH
Confidence 22345544333344555554
No 124
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=39.09 E-value=1.7e+02 Score=24.32 Aligned_cols=59 Identities=8% Similarity=0.170 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
+.+|...+.....||.|-+..+..... ..+..|...+ +-|+.|.. .|+..++.|+.+.+
T Consensus 58 lq~F~~d~~el~~Wi~ek~~~a~~~~~--------~d~~~v~~ll-~kH~afe~---El~a~~~~~~~l~~ 116 (161)
T 3lbx_A 58 LQVFKRDADDLGKWIMEKVNILTDKSY--------EDPTNIQGKY-QKHQSLEA---EVQTKSRLMSELEK 116 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSC--------CSCCCHHHHH-HHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCc--------CCHHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHH
Confidence 457888888888899998887653221 1245555544 45666653 34444444544444
No 125
>3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A*
Probab=39.02 E-value=79 Score=27.66 Aligned_cols=25 Identities=12% Similarity=0.318 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQL 113 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~ 113 (346)
+..+|++|...|..+...||+||..
T Consensus 142 ld~ivd~y~~~l~~l~~~id~lE~~ 166 (252)
T 3ck6_A 142 IEGLNGKIDLYLDTIEETLNEFDVN 166 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4455666777777777777777754
No 126
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=38.85 E-value=91 Score=22.88 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 019120 94 ARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~ 115 (346)
++++.-...|++..++|+..|.
T Consensus 12 e~l~~~A~~~~~~~~~i~~~l~ 33 (93)
T 4ioe_A 12 EELERIAGNFKNAAGEAQSQIN 33 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555555544
No 127
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=38.80 E-value=1.8e+02 Score=24.61 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+-+|...+..+..||.+-|..+..
T Consensus 3 L~~f~~~~~~l~~Wl~~ke~~l~~ 26 (218)
T 3edu_A 3 LFQLKRETDDLEQWISEKELVASS 26 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 347888999999999999999874
No 128
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=38.74 E-value=1.8e+02 Score=24.65 Aligned_cols=74 Identities=8% Similarity=0.060 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCC--------CCCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLIL-LDPDRNS--------SSHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~-s~s~~~~--------S~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+.+.++++|-..+. +...++. +.+.. ....++...|+.+-+.+..+...+..+.+
T Consensus 59 ~f~~lh~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~ 138 (182)
T 1tjo_A 59 EFRDLHLFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTE 138 (182)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566788999999999999998855555 4443322 11110 11246777777777777777777766666
Q ss_pred HHHHH
Q 019120 157 YVETM 161 (346)
Q Consensus 157 ~Ve~l 161 (346)
..++.
T Consensus 139 ~a~e~ 143 (182)
T 1tjo_A 139 LAENL 143 (182)
T ss_dssp HHHHT
T ss_pred HHhHC
Confidence 55444
No 129
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=38.62 E-value=1.1e+02 Score=27.61 Aligned_cols=11 Identities=27% Similarity=0.329 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 019120 95 RFEKYLGEFRQ 105 (346)
Q Consensus 95 ~FE~rL~~YRq 105 (346)
++|.-|..|..
T Consensus 28 ~le~El~EFqe 38 (189)
T 2v71_A 28 EARDELVEFQE 38 (189)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333433
No 130
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=38.22 E-value=1.1e+02 Score=23.92 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
.....+++.++..+++.+++++..--.+.- +++. ..+......+.....-.-.+..++..|.+++..++.
T Consensus 23 ~~~~~~l~~~i~~l~~~l~~l~~~g~~CPv-Cgs~---l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~l~~ 92 (112)
T 1l8d_A 23 TQRIGELKNKIGDLKTAIEELKKAKGKCPV-CGRE---LTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELER 92 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEECTT-TCCE---ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455777888888888888888763111211 2221 112222334444444444444444444444444443
No 131
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=38.07 E-value=66 Score=27.34 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 019120 93 VARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+++|-+.++.++..|+.|+..+.
T Consensus 38 m~~F~~~v~~I~~~i~~i~~~v~ 60 (180)
T 1s94_A 38 MEEFFEQVEEIRAMIDKISDNVD 60 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888888888777
No 132
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=38.01 E-value=1.4e+02 Score=23.73 Aligned_cols=23 Identities=30% Similarity=0.393 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 019120 94 ARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s 116 (346)
+-||.+-++|+..+++|.+.+..
T Consensus 15 elFe~YE~df~~l~~~i~~kl~~ 37 (102)
T 2qyw_A 15 EHFEKLHEIFRGLLEDLQGVPER 37 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667777777777777763
No 133
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=38.01 E-value=1.7e+02 Score=24.23 Aligned_cols=105 Identities=9% Similarity=0.049 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhhchHHHHHHhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhccCCCCCccH
Q 019120 8 LQERMAVVKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGLPKKPSA 87 (346)
Q Consensus 8 ~~~l~~~V~~~lrntE~Avrs~~~lr~rf~~~~~~~~~~~~~~~~~~g~~~~~~~~~qp~~~~~~pv~Dfys~~p~~Ps~ 87 (346)
-+++.+..++.|.|.=.++--|. -.++. +.|+
T Consensus 15 ~~~vi~~Ln~~La~~~~l~~q~~-----~~hw~-------------------------------------v~G~------ 46 (162)
T 1o9r_A 15 KSTVIGILNESLASVIDLALVTK-----QAHWN-------------------------------------LKGP------ 46 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHH-------------------------------------CBST------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----hhhhh-------------------------------------eECc------
Confidence 34566777788888888887666 24444 2232
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+.. ....+....|+.+-+.+..+...+..+.+
T Consensus 47 ~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~ 126 (162)
T 1o9r_A 47 QFIAVHELLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYKIHDHLDALIERYGEVANMIRKAID 126 (162)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667899999999999999998 5554444433222 0000 00124556666666656555555555544
Q ss_pred HHHH
Q 019120 157 YVET 160 (346)
Q Consensus 157 ~Ve~ 160 (346)
..++
T Consensus 127 ~a~~ 130 (162)
T 1o9r_A 127 DSDE 130 (162)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 4333
No 134
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=37.82 E-value=44 Score=26.74 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHH
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIF 143 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~ 143 (346)
++++.++...+.++++||+.+...... .... +.-+.+...|+.+|+|
T Consensus 4 ~~L~~~i~~L~~q~~~L~~ei~~~~a~-L~~~--~~~~~~~~hI~~Lh~Y 50 (85)
T 3viq_B 4 SQLESRVHLLEQQKEQLESSLQDALAK-LKNR--DAKQTVQKHIDLLHTY 50 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-CSSS--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccC--CHHHHHHHHHHHHHHH
Confidence 345555555555555555554411100 0000 1124466777777766
No 135
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=37.79 E-value=1.7e+02 Score=27.51 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=20.5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 131 QSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 131 Q~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
.++..-++.+++-...+...++.+.+.+..+.+.|++.
T Consensus 257 ~~~~~~lrDv~d~~~~~~e~~~~~re~l~~l~d~~~s~ 294 (363)
T 2iub_A 257 KETVPYFRDVYDHTIQIADTVETFRDIVSGLLDVYLSS 294 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555555555555555566665554
No 136
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=37.09 E-value=1.9e+02 Score=24.40 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=21.4
Q ss_pred hccCCCCCccHHHHHHHHHHHHHHHHHHH
Q 019120 77 FYRGLPKKPSAFLQQTVARFEKYLGEFRQ 105 (346)
Q Consensus 77 fys~~p~~Ps~YF~qlV~~FE~rL~~YRq 105 (346)
|.-.++. .-+|+.+++..++++|.++++
T Consensus 19 Y~i~g~e-~ee~L~~vA~~vd~km~ei~~ 46 (138)
T 3hnw_A 19 IKLGGYE-SEEYLQRVASYINNKITEFNK 46 (138)
T ss_dssp EEECSCS-CHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCCC-cHHHHHHHHHHHHHHHHHHHh
Confidence 4444443 569999999999999988874
No 137
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=36.87 E-value=1.3e+02 Score=22.60 Aligned_cols=24 Identities=8% Similarity=0.181 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 95 RFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
+|++-+..|++-||.+-+.++...
T Consensus 28 ~y~eAl~~Y~~aie~l~~a~k~e~ 51 (85)
T 2v6x_A 28 QYEEAYTAYYNGLDYLMLALKYEK 51 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578888999999999988887443
No 138
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=36.86 E-value=2e+02 Score=26.07 Aligned_cols=16 Identities=13% Similarity=0.395 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHhh
Q 019120 100 LGEFRQWIEELEQLIL 115 (346)
Q Consensus 100 L~~YRqqIEELE~~L~ 115 (346)
+..|+.-|++||+.+.
T Consensus 65 ~eKy~~FigDLekVv~ 80 (190)
T 3thf_A 65 ASKFRTHVDAVGNITS 80 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4457777777777665
No 139
>1io1_A Phase 1 flagellin; beta-folium, structural protein; 2.00A {Salmonella typhimurium} SCOP: e.32.1.1
Probab=36.83 E-value=66 Score=31.32 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH-
Q 019120 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKTAYLADQR- 170 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe~YL~~~R- 170 (346)
..|.+|.+.|.+-...|+... ..++++..+|+++.+.-|+-+ ...+.|.++|+.++++-+.+-.
T Consensus 6 ~~l~q~~~N~~~~~s~lqtae---------~aL~~i~~~Lqr~relavqaangt~s~~dr~ai~~Ei~~l~~ei~~ia~~ 76 (398)
T 1io1_A 6 KGLTQASRNANDGISIAQTTE---------GALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQ 76 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 457778888888877777443 247788999999999999876 5678888999999998777543
Q ss_pred hcCCCCCcc
Q 019120 171 RRGDGSDPF 179 (346)
Q Consensus 171 r~GD~~DPF 179 (346)
..-+.+..|
T Consensus 77 t~fnG~~l~ 85 (398)
T 1io1_A 77 TQFNGVKVL 85 (398)
T ss_dssp CCBTTBCTT
T ss_pred ceeCCeEee
Confidence 223345555
No 140
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=36.73 E-value=1.4e+02 Score=26.26 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.+|...+..+..||++.|..+...
T Consensus 111 l~~f~~~~~~~~~Wl~e~e~~~~~~ 135 (322)
T 1u4q_A 111 LHQFFRDMDDEESWIKEKKLLVSSE 135 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC
Confidence 3557777888888999999887743
No 141
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=36.53 E-value=1.6e+02 Score=23.52 Aligned_cols=20 Identities=30% Similarity=0.283 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q 019120 100 LGEFRQWIEELEQLILLDPD 119 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~ 119 (346)
|+.||+-|++||+=|.....
T Consensus 39 ~~~YkkGi~eL~~Gi~V~~~ 58 (89)
T 3eab_A 39 VEWYKKGIEELEKGIAVIVT 58 (89)
T ss_dssp HHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhhcCCccC
Confidence 99999999999999996553
No 142
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=36.27 E-value=2.3e+02 Score=25.12 Aligned_cols=72 Identities=13% Similarity=0.192 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCcc--ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGSS--LLQSLPQVISNVHIFFVHVAAKAESIHQ 156 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs~--tpQ~L~~~L~~~hq~FvaLAArva~LHe 156 (346)
-|..+-..||+...+...++++| ||.+.+...++.+ .+... ...++...|+.+-+.+..+...+..+.+
T Consensus 90 ~F~~LHe~~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~I~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~ 169 (207)
T 2c2u_A 90 FFRDLHLAYDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETVRDARTQVADLVQDLSRVGKGYRDDSQ 169 (207)
T ss_dssp THHHHHHHHHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCSSCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677899999999999999988 5555554433221 01000 0124556666665555555555555444
Q ss_pred HHH
Q 019120 157 YVE 159 (346)
Q Consensus 157 ~Ve 159 (346)
..+
T Consensus 170 ~ae 172 (207)
T 2c2u_A 170 ACD 172 (207)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 143
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=36.19 E-value=1.7e+02 Score=27.01 Aligned_cols=56 Identities=9% Similarity=-0.021 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
..+.+.+++++++.++..|+++|+.|... .-..+..+..+.+++...|+.|-..
T Consensus 224 p~~~l~~l~~~i~~l~~~l~~~~~~l~~~--------------------------~~~~~~~l~~~~~~l~~~~~~~~~~ 277 (357)
T 3rrk_A 224 LGKAAARMKERARLAPEELVGIREEVARL--------------------------SRESGEALIALWTRAKDEVARYKAV 277 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777777776665521 1122345666777777777777665
Q ss_pred HH
Q 019120 169 QR 170 (346)
Q Consensus 169 ~R 170 (346)
..
T Consensus 278 ~~ 279 (357)
T 3rrk_A 278 AD 279 (357)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 144
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=36.00 E-value=1.9e+02 Score=24.08 Aligned_cols=32 Identities=6% Similarity=0.149 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCC
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPD 119 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~ 119 (346)
-|..+-..||+...+.+.++++| ||.+.+...
T Consensus 50 ~f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~ 82 (161)
T 2yjk_A 50 NFIAIHELLDSVVAHAQDYADTAAERIVALGLP 82 (161)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 46778899999999999999988 555555544
No 145
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=35.93 E-value=97 Score=25.35 Aligned_cols=27 Identities=19% Similarity=0.127 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+.+-|+.+|..-...++.|++||..|-
T Consensus 17 lr~ei~~Le~E~~rLr~~~~~LE~~Le 43 (100)
T 1go4_E 17 LRLKVEELEGERSRLEEEKRMLEAQLE 43 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788888888999999999998776
No 146
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=35.64 E-value=2.2e+02 Score=24.68 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 019120 95 RFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+|-.++..+..||++.|..|...
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~~~ 155 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQDM 155 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHhHHHHHHHHHHHHHhccc
Confidence 55556666677888888777643
No 147
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=35.30 E-value=2.1e+02 Score=28.34 Aligned_cols=25 Identities=20% Similarity=0.174 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.-+.+||+.|.++.+-.++++++++
T Consensus 38 ~~l~~LE~~l~elsn~ts~v~~Lvk 62 (409)
T 1m1j_C 38 GELLEIEGLLQQATNSTGSIEYLIQ 62 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567778888887777777777665
No 148
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=35.04 E-value=1.9e+02 Score=28.71 Aligned_cols=16 Identities=6% Similarity=-0.180 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhhchH
Q 019120 8 LQERMAVVKDMLRNTE 23 (346)
Q Consensus 8 ~~~l~~~V~~~lrntE 23 (346)
+.||.+++.+|..+.+
T Consensus 251 ~~eL~~~~~~i~~~~~ 266 (413)
T 4hpq_C 251 NSLLQDAAIDVASFVR 266 (413)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444433
No 149
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.80 E-value=53 Score=25.41 Aligned_cols=25 Identities=20% Similarity=0.213 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+-+.++|.+|..-...||+|-..|.
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~ 38 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALA 38 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555555555555544
No 150
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=34.46 E-value=1.7e+02 Score=23.06 Aligned_cols=74 Identities=9% Similarity=0.062 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC---------CCc--cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSS---------HGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~---------~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-+.|++...+-+.++++|-..+...++..... +.. ... ++...|+..-+-+..+...+..+++.
T Consensus 32 f~~l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~~~~ 110 (142)
T 1ji5_A 32 FFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGE-TAEGMVEAIMKDYEMMLVELKKGMEI 110 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455688999999999999999987777555432211 110 012 67778888877777777777777766
Q ss_pred HHHHHH
Q 019120 158 VETMKT 163 (346)
Q Consensus 158 Ve~lKe 163 (346)
.++.+|
T Consensus 111 a~~~~D 116 (142)
T 1ji5_A 111 AQNSDD 116 (142)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 555444
No 151
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=33.96 E-value=1.8e+02 Score=23.17 Aligned_cols=74 Identities=14% Similarity=0.155 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC---------CC--ccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSS---------HG--SSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~---------~g--s~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-+.|++..++-+.++++|=..|...++..... +. .... ++...++...+-+..+...+..+.+.
T Consensus 36 f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~ 114 (146)
T 1jig_A 36 FFTLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKE-SAEEMVQTLVNDYSALIQELKEGMEV 114 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445688899999999999998866666444322111 10 0112 67788888888888887777777766
Q ss_pred HHHHHH
Q 019120 158 VETMKT 163 (346)
Q Consensus 158 Ve~lKe 163 (346)
.++.+|
T Consensus 115 a~~~~D 120 (146)
T 1jig_A 115 AGEAGD 120 (146)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 655544
No 152
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=33.72 E-value=57 Score=23.56 Aligned_cols=25 Identities=24% Similarity=0.377 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L 114 (346)
...++.+.++|...-+.+|.||+.|
T Consensus 22 ~~~l~~Lt~kL~~vt~rle~lEnrl 46 (47)
T 1aq5_A 22 EELINTLQQKLEAVAKRIEALENKI 46 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4567888899999999999999876
No 153
>3pwx_A Putative flagellar HOOK-associated protein; structural genomics, structural protein, PSI-2, protein STRU initiative; 2.50A {Vibrio parahaemolyticus}
Probab=33.72 E-value=1e+02 Score=27.75 Aligned_cols=73 Identities=10% Similarity=0.176 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHh
Q 019120 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKTAYLADQRR 171 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe~YL~~~Rr 171 (346)
.+|.+|.+.|.+....|+... ..+..+..+|+++.+.-|+.+ ...+.|.++|+.++++.+..--.
T Consensus 21 ~~l~q~~~N~~~a~s~l~~ae---------~aL~~i~~~l~r~rel~vqa~ngt~s~~dr~ai~~E~~~l~~~i~~iaNt 91 (239)
T 3pwx_A 21 SAIAQYQSNIANLKTTLSSQE---------THLDSVSESLKSMRDIVLWGANGSLTDQDRSGMITELKSYRDSIESSFNA 91 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHSCSSCCTTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 345555555666555655332 247788888999988888764 35678888888888887776542
Q ss_pred c-CCCCCcc
Q 019120 172 R-GDGSDPF 179 (346)
Q Consensus 172 ~-GD~~DPF 179 (346)
. .+.+-.|
T Consensus 92 ~~~nG~ylF 100 (239)
T 3pwx_A 92 QDEEGHFLF 100 (239)
T ss_dssp BCTTCCBTT
T ss_pred cccCCceee
Confidence 2 3344455
No 154
>3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae}
Probab=33.70 E-value=2.9e+02 Score=25.61 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHhh--cCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 90 QQTVARFEKYLGEFRQWIEEL---EQLIL--LDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEEL---E~~L~--s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
.+.+..|+++++.+|..|||| +.-|. ..+.+... ....++|...|+.-++..-.+..+++.|.++|++--|
T Consensus 173 ~k~L~~~~~kv~~vr~~leelLddDeDm~~myLT~k~~~---~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe 248 (261)
T 3rkg_A 173 SKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKSP---KDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEE 248 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHTCCSSCCCT---TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCHHHHHHhhccCCCCC---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345788888888888877765 11222 11121111 1346789999999888888888888888888776533
No 155
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=33.55 E-value=44 Score=29.22 Aligned_cols=29 Identities=10% Similarity=0.236 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.+-|+++|..|.+-.++|++||+.|+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 33 (198)
T 4ghu_A 5 LESQLSRHDQMLSVHDIRLADMDLRFQVL 33 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45668999999999999999999999843
No 156
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=33.37 E-value=1.7e+02 Score=27.96 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=20.0
Q ss_pred hhccCCCCCccHHHHHHHHHHHHHHHHHHHH
Q 019120 76 DFYRGLPKKPSAFLQQTVARFEKYLGEFRQW 106 (346)
Q Consensus 76 Dfys~~p~~Ps~YF~qlV~~FE~rL~~YRqq 106 (346)
+++.+- .-|-+-+.++.+++++.|.+++.+
T Consensus 363 ~vl~G~-~t~eeal~~~~~~i~~~l~~~~~~ 392 (471)
T 3mq9_A 363 NAASGR-QTVDEALKDAQTRITAARDGLRAV 392 (471)
T ss_dssp HHHHSS-SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCC-CCHHHHHHHHHHHHHHHHHhhHHH
Confidence 344453 467778888888877777766654
No 157
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=33.23 E-value=2.1e+02 Score=23.76 Aligned_cols=24 Identities=17% Similarity=0.486 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
.+|...+..+..||+++|..|...
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~ 26 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASE 26 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhCC
Confidence 478889999999999999998744
No 158
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=33.09 E-value=1.9e+02 Score=23.18 Aligned_cols=74 Identities=15% Similarity=0.138 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC---------CC--ccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSS---------HG--SSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~---------~g--s~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-+.|++...+-+.++++|=..+...++..... +. .... ++...|+...+.+..+...+..+.+.
T Consensus 39 f~~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~ 117 (149)
T 1n1q_A 39 FFTLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGE-SAAEMVSSVVNDFVDLVGELKVARDV 117 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445688899999999999999866666444322211 00 0112 67788888888888887777777766
Q ss_pred HHHHHH
Q 019120 158 VETMKT 163 (346)
Q Consensus 158 Ve~lKe 163 (346)
.++.+|
T Consensus 118 a~~~~D 123 (149)
T 1n1q_A 118 ADEADD 123 (149)
T ss_dssp HHHTTC
T ss_pred HHHCCC
Confidence 655544
No 159
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=32.84 E-value=39 Score=28.83 Aligned_cols=29 Identities=28% Similarity=0.332 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
=+.+.++++|.+|...+++|++||..|..
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (192)
T 1ca9_A 7 ALSSKVQQLERSIGLKDLAMADLEQKVLE 35 (192)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667888899999999999999988773
No 160
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=32.76 E-value=1.9e+02 Score=25.59 Aligned_cols=64 Identities=9% Similarity=0.064 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
+.+--..|+..|..|+..|++|...-..... ..++ ....|...+..+++.+-.|-...+.-+.+
T Consensus 42 ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~--~~~~---~~~~i~~~l~~l~~~w~~L~~~~~~R~~~ 105 (326)
T 3kbt_A 42 MLKRHLRQQRAVEDYGRNIKQLASRAQGLLS--AGHP---EGEQIIRLQGQVDKHYAGLKDVAEERKRK 105 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCT---THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455678999999999999998875442111 0111 13456666666666665554444433333
No 161
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=32.70 E-value=3.2e+02 Score=27.56 Aligned_cols=16 Identities=6% Similarity=0.331 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 019120 96 FEKYLGEFRQWIEELE 111 (346)
Q Consensus 96 FE~rL~~YRqqIEELE 111 (346)
.++.|++.+..+++||
T Consensus 98 V~~~LqeLe~~l~~ls 113 (464)
T 1m1j_B 98 VKPVLRDLKDRVAKFS 113 (464)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHh
Confidence 3344444444444444
No 162
>2yfa_A MCPS, methyl-accepting chemotaxis transducer; receptor, chemoreceptor; 1.80A {Pseudomonas putida} PDB: 2yfb_A
Probab=32.66 E-value=1.9e+02 Score=24.73 Aligned_cols=68 Identities=9% Similarity=-0.029 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQ 169 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~ 169 (346)
++.+.+.+......++.|...|. .. . ...+.|...|....+.|..+..-+..+++.+++|....-+.-
T Consensus 173 ~~~~~~~~~~~~~~l~~L~~~l~--~~------~-~~l~~~~~~l~~Y~~~~~~~~~a~~~~~~~~~~m~~~g~~l~ 240 (258)
T 2yfa_A 173 EQAALRQLDAALADTDNLKRQLP--SE------D-ARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIV 240 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCG--GG------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC--ch------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555432 10 0 235667777788888888887777777777777766655543
No 163
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=32.41 E-value=86 Score=30.43 Aligned_cols=64 Identities=13% Similarity=0.120 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHH------HHHHH--HHHHHHHHHHHHHHHH
Q 019120 101 GEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAA------KAESI--HQYVETMKTAYLADQR 170 (346)
Q Consensus 101 ~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAA------rva~L--He~Ve~lKe~YL~~~R 170 (346)
....+..|++|+.|..... ++ .-.+++...|+.+++.|+..-. .-..| -|+|...-|.||+.+.
T Consensus 272 ~~L~e~Ae~ie~~i~el~~--~~----~e~~~~V~~LE~qyD~~~~~~~~~~l~~~~~~~ps~dei~~efErfL~~~~ 343 (351)
T 2wam_A 272 AVLAEAAAEVQAKIDEQVQ--AS----AEVAQVVAALERQYDAFIDAQENRSLLTRDEDLPSGDELGAEFERFLAQQA 343 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHT--TC----HHHHHHHHHHHHHHHHHHHHHHHTTC-------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH--hC----HHHHHHHHHHHhhhchhhhhcccccccccccCCCCHHHHHHHHHHHHHhcC
Confidence 4555555565555552221 11 1244566788999999875321 11223 4667778888998665
No 164
>3zrx_A AF1503 protein, osmolarity sensor protein ENVZ; signaling protein, osmoregulation, OMPR, OMPC; 1.25A {Archaeoglobus fulgidus} PDB: 3zrv_A 3zrw_A 3zrw_B 2lfs_A 2lfr_A 1joy_A 2l7i_A 2y20_A 2l7h_A 2y21_A 2y0t_A 2y0q_A
Probab=32.15 E-value=1.1e+02 Score=21.66 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
-+.++...|.+-+..+++.+++.++.+.
T Consensus 38 Ei~~l~~~~n~m~~~l~~~~~~~~~~~~ 65 (115)
T 3zrx_A 38 EIGILAKSIERLRRSLKQLADDRTLLMA 65 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555555444333
No 165
>3k8w_A Flagellin homolog; flagellum, structural protein, bacterial flagellu; 1.70A {Sphingomonas SP} PDB: 2zbi_A 3k8v_A
Probab=31.87 E-value=1.2e+02 Score=29.31 Aligned_cols=69 Identities=9% Similarity=0.112 Sum_probs=48.0
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q 019120 93 VARFEKY---LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKT 163 (346)
Q Consensus 93 V~~FE~r---L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe 163 (346)
+.+|+.+ |.+|.+.|.+....|+... ..+..+..+|+++.+.-|+.+ ...+.|.++|+.+++
T Consensus 31 a~~L~sqi~~l~Q~~rN~~da~S~LqtAE---------~AL~~i~diLqrmRELaVQAaNgT~s~~DR~aIa~Ei~qL~~ 101 (326)
T 3k8w_A 31 SDRMTAQIKGLTQAQRNANDGISLAQTAE---------GALGEISNNLQRIRELAVQASNGTNTQTDRDALQAEVTQLQS 101 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 4445444 4445555555555555332 347889999999999998875 577889999999999
Q ss_pred HHHHHHH
Q 019120 164 AYLADQR 170 (346)
Q Consensus 164 ~YL~~~R 170 (346)
+.+.+-.
T Consensus 102 eI~~iAN 108 (326)
T 3k8w_A 102 EIQRVAE 108 (326)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8777654
No 166
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=31.57 E-value=2.4e+02 Score=23.85 Aligned_cols=25 Identities=24% Similarity=0.535 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
+.+|...+..+..||+++|..|...
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~ 39 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSD 39 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6789999999999999999998743
No 167
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=31.40 E-value=1.4e+02 Score=29.36 Aligned_cols=18 Identities=17% Similarity=0.133 Sum_probs=9.8
Q ss_pred HHHHHhhchHHHHHHhhh
Q 019120 14 VVKDMLRNTEIAVRSFMM 31 (346)
Q Consensus 14 ~V~~~lrntE~Avrs~~~ 31 (346)
.+.+++.+.+.|-+.|..
T Consensus 144 ~l~~~~~~l~KaKk~Y~~ 161 (486)
T 3haj_A 144 PWAKKLKEVEAAKKAHHA 161 (486)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334445556666666653
No 168
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=31.22 E-value=1.2e+02 Score=26.10 Aligned_cols=17 Identities=0% Similarity=-0.035 Sum_probs=9.4
Q ss_pred HHHHHHHHHhhchHHHH
Q 019120 10 ERMAVVKDMLRNTEIAV 26 (346)
Q Consensus 10 ~l~~~V~~~lrntE~Av 26 (346)
+..+.+.+.|++.|...
T Consensus 25 ~~a~~~ve~l~~seL~q 41 (185)
T 3r2p_A 25 DSGRDYVSQFEGSALGK 41 (185)
T ss_dssp HHHHHHHHHHHHSHHHH
T ss_pred HHHHHHHHHHHcchHHH
Confidence 34445556666666555
No 169
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=30.88 E-value=57 Score=26.10 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 019120 96 FEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 96 FE~rL~~YRqqIEELE~~L~ 115 (346)
|+.++..|...|.+||..|.
T Consensus 35 ~~~e~~~~q~~i~~lE~eL~ 54 (95)
T 3mov_A 35 LAKEKDNSRRMLTDKEREMA 54 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344455555555555444
No 170
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=30.77 E-value=2.2e+02 Score=23.36 Aligned_cols=73 Identities=8% Similarity=0.150 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCCC--------CCc-cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSSS--------HGS-SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S~--------~gs-~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
-|..+-..||+...+...++++| ||.+.+...++.+. +.. ..-.++...|+.+-+.+..+...+..+.+.
T Consensus 42 ~f~~lh~~~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ 121 (153)
T 2chp_A 42 HFFTLHEKFEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSASEMVQALVNDYKQISSESKFVIGL 121 (153)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677889999999999999988 55555544332210 000 000145566666666666665555555544
Q ss_pred HHH
Q 019120 158 VET 160 (346)
Q Consensus 158 Ve~ 160 (346)
.++
T Consensus 122 a~~ 124 (153)
T 2chp_A 122 AEE 124 (153)
T ss_dssp HHH
T ss_pred Hhh
Confidence 433
No 171
>1dn1_B Syntaxin 1A, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3c98_B
Probab=30.77 E-value=2.6e+02 Score=25.44 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILL-DPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s-~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
=|.+.|++....|..+++.|++|++.... .+..+.. ...-..|-..+..+...+-.+-.+|..|...
T Consensus 32 ~F~~~v~~I~~~I~~I~~~v~~l~~l~~~~l~~~~~~---~~~~~~l~~l~~~i~~~~~~i~~~Lk~l~~~ 99 (267)
T 1dn1_B 32 EFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPD---EKTKEELEELMSDIKKTANKVRSKLKSIEQS 99 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCC---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567999999999999999999998762 2221110 0111233334444444454555555555443
No 172
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=30.76 E-value=1.6e+02 Score=21.67 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=26.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
+.+|...+..|-+..-.+-..|+..+++|+....+-...
T Consensus 22 F~dla~lV~eQge~id~Ie~nv~~a~~~v~~g~~eL~kA 60 (71)
T 2nps_B 22 FKDLAMMIHDQGDLIDSIEANVESSEVHVERASDQLQRA 60 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777777777777777777666654443
No 173
>2xhe_B Syntaxin1; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=30.68 E-value=1.1e+02 Score=27.89 Aligned_cols=73 Identities=15% Similarity=0.133 Sum_probs=42.7
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 84 KPSAFLQQTVARFEKYLGEFRQWIEELEQLIL-LDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYV 158 (346)
Q Consensus 84 ~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~-s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~V 158 (346)
.+.+ |.+.|++....|..++..|++|++... ..+...-. ........|......+.+.|-.+-.+|..|...+
T Consensus 42 ~~~~-F~~~~~~I~~~I~~i~~~l~~L~~l~~~~l~t~~~~-~~~~~~~~ie~l~~~i~~~~~~i~~~lk~l~~~~ 115 (279)
T 2xhe_B 42 FMAD-FFNRVKRIRDNIEDIEQAIEQVAQLHTESLVAVSKE-DRDRLNEKLQDTMARISALGNKIRADLKQIEKEN 115 (279)
T ss_dssp CSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSSTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 556799999999999999999999875 22210000 0000123444555555555555555555555443
No 174
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=30.59 E-value=2.2e+02 Score=23.23 Aligned_cols=74 Identities=16% Similarity=0.207 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC---------CC--ccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSS---------HG--SSLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~---------~g--s~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-+.|+++..+-+..+++|=..|...++..... +. .... ++...|+.+-+-+..+...+..+.+.
T Consensus 38 f~~lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~ 116 (156)
T 2d5k_A 38 FFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGY-SAEQMVEELSQDFTNISKQLENAIEI 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455688999999999999998866655444322211 10 0112 67788888888888777777777766
Q ss_pred HHHHHH
Q 019120 158 VETMKT 163 (346)
Q Consensus 158 Ve~lKe 163 (346)
.++.+|
T Consensus 117 a~~~~D 122 (156)
T 2d5k_A 117 AGNAGD 122 (156)
T ss_dssp HHHHTC
T ss_pred HHHCCC
Confidence 555443
No 175
>1t72_A Phosphate transport system protein PHOU homolog; helix bundle, structural genomics, BSGC structure funded by NIH, protein structure initiative; 2.90A {Aquifex aeolicus} SCOP: a.7.12.1 PDB: 1t8b_A
Probab=30.40 E-value=1.7e+02 Score=24.79 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQL 113 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~ 113 (346)
+..|+++|...++.|.++=..
T Consensus 6 ~~~~~~~l~~~~~~l~~M~~~ 26 (227)
T 1t72_A 6 GMKLFKELEETKEQVIKMAKL 26 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445666666666655554443
No 176
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=30.38 E-value=2.2e+02 Score=27.59 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQRRR 172 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~Rr~ 172 (346)
++.+++.+..+++.|+.+++.+....+ . +|. ++.-....+++.|.+..+++.+.|.+...+.
T Consensus 289 ~~~l~~d~~~L~~~l~~~~~e~~~~d~-----------~----~l~---~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yF 350 (402)
T 4eah_A 289 LENVLLDVKELGRGMELIRRECSIHDN-----------S----VLR---NFLSTNEGKLDKLQRDAKTAEEAYNAVVRYF 350 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC-----------T----TTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccch-----------H----HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356777788888888887776653221 1 122 2233455688999999999999999999987
Q ss_pred CCC
Q 019120 173 GDG 175 (346)
Q Consensus 173 GD~ 175 (346)
|..
T Consensus 351 ged 353 (402)
T 4eah_A 351 GES 353 (402)
T ss_dssp TCC
T ss_pred CCC
Confidence 743
No 177
>3r8s_Y 50S ribosomal protein L29; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_W 1p86_W 1vs8_X 1vs6_X 2aw4_X 2awb_X 1vt2_Y 2i2v_Y 2j28_X 2i2t_Y* 2qao_X* 2qba_X* 2qbc_X* 2qbe_X 2qbg_X 2qbi_X* 2qbk_X* 2qov_X 2qox_X 2qoz_X* ...
Probab=30.33 E-value=87 Score=23.16 Aligned_cols=29 Identities=7% Similarity=0.056 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH--hcCCCCCcc
Q 019120 151 AESIHQYVETMKTAYLADQR--RRGDGSDPF 179 (346)
Q Consensus 151 va~LHe~Ve~lKe~YL~~~R--r~GD~~DPF 179 (346)
.++|++++.++|.++.++|= ..|-..||-
T Consensus 11 ~~EL~~~l~elk~Elf~LR~q~atgql~n~~ 41 (63)
T 3r8s_Y 11 VEELNTELLNLLREQFNLRMQAASGQLQQSH 41 (63)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHTTCCSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcCcH
Confidence 57899999999999999774 688778876
No 178
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=30.32 E-value=1.8e+02 Score=22.19 Aligned_cols=41 Identities=7% Similarity=0.065 Sum_probs=27.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 129 LLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQ 169 (346)
Q Consensus 129 tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~ 169 (346)
-.+++..++.++..---.+-.++..|..+++.+.+..-++.
T Consensus 59 v~~~~~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk 99 (107)
T 1fxk_A 59 IRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQ 99 (107)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788877777666666666666666666666555544
No 179
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=30.19 E-value=2.5e+02 Score=23.76 Aligned_cols=73 Identities=8% Similarity=-0.044 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC---------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSS---------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S---------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-..||+...+-+.++++|-..|...++.... .+.. ....++...|+..-+.+..+...+..+.+.
T Consensus 59 f~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~ 138 (192)
T 2vxx_A 59 FYPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQ 138 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55668899999999999999997777755542221 1110 113467778888777777777777766665
Q ss_pred HHHH
Q 019120 158 VETM 161 (346)
Q Consensus 158 Ve~l 161 (346)
.++.
T Consensus 139 a~~~ 142 (192)
T 2vxx_A 139 AESL 142 (192)
T ss_dssp HHHH
T ss_pred HHHC
Confidence 4443
No 180
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=30.11 E-value=58 Score=24.15 Aligned_cols=18 Identities=28% Similarity=0.331 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEEL 110 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEEL 110 (346)
..+++..|...+..|+.|
T Consensus 21 ~~~i~~~l~~l~~~v~~l 38 (94)
T 3fav_B 21 VTSIHSLLDEGKQSLTKL 38 (94)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 181
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=29.94 E-value=58 Score=22.93 Aligned_cols=22 Identities=27% Similarity=0.253 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 019120 94 ARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+.+|+||......++.|...|.
T Consensus 19 e~LE~Ri~~LE~KLd~L~~~l~ 40 (43)
T 2pnv_A 19 EDFEKRIVTLETKLETLIGSIH 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666666666555
No 182
>1fzc_B Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_B* 1fza_B* 1fze_B* 1fzf_B* 1fzg_B* 1n86_B* 1n8e_B 2h43_B* 2hlo_B* 2hod_B* 2hpc_B* 2q9i_B* 2xnx_B 2xny_B 3e1i_B* 2z4e_B* 2oyh_B* 1ltj_B* 1rf0_B* 1lt9_B* ...
Probab=29.85 E-value=55 Score=31.46 Aligned_cols=26 Identities=8% Similarity=0.148 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 136 VISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 136 ~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
.|+.+.+.+.+|-.||+.|..+|+.+
T Consensus 31 ~I~~Lq~~le~l~~KIq~Le~~v~~~ 56 (328)
T 1fzc_B 31 NLRVLRSILENLRSKIQKLESDVSAQ 56 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445555555555544433
No 183
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=29.84 E-value=1.9e+02 Score=26.73 Aligned_cols=22 Identities=9% Similarity=0.212 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 019120 87 AFLQQTVARFEKYLGEFRQWIE 108 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIE 108 (346)
||..++-..+++.|..||++++
T Consensus 55 Py~~el~~~~~~~~eelr~kL~ 76 (273)
T 3s84_A 55 PYADQLRTQVNTQAEQLRRQLT 76 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHH
Confidence 3444444444444444444433
No 184
>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, chromosome segregation, hinge, dimerization domain; 3.10A {Escherichia coli}
Probab=29.67 E-value=1.1e+02 Score=29.49 Aligned_cols=55 Identities=16% Similarity=0.190 Sum_probs=38.0
Q ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHH-HHH
Q 019120 78 YRGLPKKPSAFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVH-VAA 149 (346)
Q Consensus 78 ys~~p~~Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~Fva-LAA 149 (346)
||..|+.|. |-+... |+||...+.++|+++-.....+ -=..+++++|+.|.. |+.
T Consensus 208 ySr~Pe~Pl--fGraAR--E~rle~L~~ere~~~e~~a~~a-------------fd~qk~qRl~q~~~~fv~~ 263 (302)
T 3ibp_A 208 YSRFPEVPL--FGRAAR--ESRIESLHAEREVLSERFATLS-------------FDVQKTQRLHQAFSRFIGS 263 (302)
T ss_dssp EEECCSSCS--SCHHHH--HHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCc--ccHHHH--HHHHHHHHHHHHHHHHHHHHHh-------------hHHHHHHHHHHHHHHHHhh
Confidence 677777764 555444 8999999999999985544222 014677888888877 544
No 185
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=29.46 E-value=93 Score=28.72 Aligned_cols=63 Identities=25% Similarity=0.348 Sum_probs=46.3
Q ss_pred hhHHHHHHHH-HHHHHHhhchHHHHHHhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhccCC
Q 019120 3 RQKAQLQERM-AVVKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGL 81 (346)
Q Consensus 3 r~k~~~~~l~-~~V~~~lrntE~Avrs~~~lr~rf~~~~~~~~~~~~~~~~~~g~~~~~~~~~qp~~~~~~pv~Dfys~~ 81 (346)
|.|.+|++.- ..|.++||.-+.|.+-|+.| |+ .| .
T Consensus 32 ~Ak~rLe~~hr~k~~~VmkEW~eae~q~k~l-pk---------------------------------------ad--k-- 67 (219)
T 3pmr_A 32 RAKMDLEERRMRQINEVMREWAMADNQSKNL-PK---------------------------------------AD--R-- 67 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTS-CH---------------------------------------HH--H--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ch---------------------------------------hH--H--
Confidence 5677775553 68999999999998766544 11 11 0
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 82 PKKPSAFLQQTVARFEKYLGEFRQWIEEL 110 (346)
Q Consensus 82 p~~Ps~YF~qlV~~FE~rL~~YRqqIEEL 110 (346)
+.-.+=|+++|..+|+....-|++++|+
T Consensus 68 -k~m~~rFQ~~v~aLE~E~~~ErqqL~et 95 (219)
T 3pmr_A 68 -QALNEHFQSILQTLEEQVSGERQRLVET 95 (219)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 1225679999999999999999999885
No 186
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=29.44 E-value=74 Score=24.83 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHhhhcc
Q 019120 6 AQLQERMAVVKDMLRNTEIAVRSFMMLR 33 (346)
Q Consensus 6 ~~~~~l~~~V~~~lrntE~Avrs~~~lr 33 (346)
..|..-+..+...+++.+.++.-+..|-
T Consensus 23 ~~l~~q~~~l~~~~~e~~~~~~eL~~l~ 50 (117)
T 2zqm_A 23 QLVVQQKQKVQLELTEAKKALDEIESLP 50 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344444666778888899998888654
No 187
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=29.44 E-value=2.7e+02 Score=23.94 Aligned_cols=88 Identities=10% Similarity=0.083 Sum_probs=47.0
Q ss_pred chhhccCCCCCcc-----HHHHHHHHHHHHHHHHH------HHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHH
Q 019120 74 VFDFYRGLPKKPS-----AFLQQTVARFEKYLGEF------RQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHI 142 (346)
Q Consensus 74 v~Dfys~~p~~Ps-----~YF~qlV~~FE~rL~~Y------RqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq 142 (346)
+-||.+.-|.--+ .|..+.-++|.++...+ .+.+.+|+..|..... ++ .....+++.-+.
T Consensus 31 ~pDy~~~Yp~I~S~eqR~rYK~~F~~dy~EYk~Lhaev~~v~~~F~~Ld~~L~~l~~--~s-------~e~~~i~~EY~r 101 (140)
T 1xaw_A 31 EEDWIREYPPITSDQQRQLYKRNFDTGLQEYKSLQSVLDEINKELSRLDKELDDYRE--ES-------EEYMAAADEYNR 101 (140)
T ss_dssp ---CTTTSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT--TS-------HHHHHHHHHHHH
T ss_pred CCcHHHhCCCCCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CC-------HHHHHHHHHHHH
Confidence 3476665433332 35555555554443322 2466677777775432 22 122233333333
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 143 --------FFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 143 --------~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
.|..--.|-+.||.+|..+|..=.++-+
T Consensus 102 ~k~~K~dp~y~ekK~Rc~yL~~KLsHIK~lI~~YD~ 137 (140)
T 1xaw_A 102 LKQVKGSADYKSKKNHCKQLKSKLSHIKKMVGDYDR 137 (140)
T ss_dssp HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 2666667888999999988887666543
No 188
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=29.43 E-value=37 Score=28.85 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=18.2
Q ss_pred ChhhHHHHHHHHHHHHHHhhchHH
Q 019120 1 MERQKAQLQERMAVVKDMLRNTEI 24 (346)
Q Consensus 1 ~er~k~~~~~l~~~V~~~lrntE~ 24 (346)
|||++| +|.+..|.++|.|-|.
T Consensus 1 ~~~~~a--~ef~~~v~~~l~~~~e 22 (192)
T 3k1r_A 1 MDRKVA--REFRHKVDFLIENDAE 22 (192)
T ss_dssp CHHHHH--HHHHHHHHHHCCCHHH
T ss_pred CchHHH--HHHHHHHHHHhCCHHH
Confidence 788877 6999999999996553
No 189
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=29.32 E-value=66 Score=25.79 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=25.4
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 128 SLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 128 ~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
.++-+|...|..+|+..-.+ |-++|+.+-..+||
T Consensus 58 ~~FiaLAa~l~~lH~~V~~~--Ke~Yl~~rr~~~~d 91 (93)
T 3t98_B 58 QTFVALAAQLQSIHENVKVL--KEQYLSYRKMFLGD 91 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcc
Confidence 35888999999999988888 77777766544443
No 190
>3mtu_E Head morphogenesis protein, tropomyosin alpha-1 C; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Bacillus phage PHI29}
Probab=29.15 E-value=1.5e+02 Score=23.36 Aligned_cols=38 Identities=8% Similarity=0.172 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 133 LPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 133 L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
-..+|+.+..-++.+--.|..|-+++...|+.|+..++
T Consensus 28 ~~~~~~~~~~~~~~~EKTIDDLEDkL~~eKEK~k~i~e 65 (77)
T 3mtu_E 28 RTEALQQLRVNYGSFVSEYNDLEEKVAHAKEENLNMHQ 65 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45788888888999999999999999999999999887
No 191
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=29.15 E-value=77 Score=24.39 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhhchHHHHHHhhhccc
Q 019120 8 LQERMAVVKDMLRNTEIAVRSFMMLRP 34 (346)
Q Consensus 8 ~~~l~~~V~~~lrntE~Avrs~~~lr~ 34 (346)
|..-+..+...+++.+.++.-+..|-+
T Consensus 20 l~~q~~~l~~~~~e~~~~~~EL~~l~~ 46 (107)
T 1fxk_A 20 ISVQKQTVEMQINETQKALEELSRAAD 46 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 334445666778888888888887643
No 192
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=28.79 E-value=1.2e+02 Score=25.79 Aligned_cols=23 Identities=13% Similarity=0.313 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 019120 94 ARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s 116 (346)
..|+.++.....||.+-|..|..
T Consensus 122 ~~F~~d~~~~~~WL~~~e~~L~~ 144 (218)
T 3fb2_A 122 QLFHRDCEQAENWMAAREAFLNT 144 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 34555555555666666665553
No 193
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=28.57 E-value=1.5e+02 Score=30.64 Aligned_cols=21 Identities=14% Similarity=0.186 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 019120 150 KAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 150 rva~LHe~Ve~lKe~YL~~~R 170 (346)
++..|-++++++++.|..+|-
T Consensus 528 ~~~~l~~~~~~l~~~~~~~Wl 548 (627)
T 2epl_X 528 DFPQLYQMVEDFSDQFSRQWQ 548 (627)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 566888999999999999886
No 194
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=28.46 E-value=1.9e+02 Score=21.73 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 98 KYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~ 164 (346)
+|.......+++|-.+|-...+ . -.+-..+|..-.+|.-.|=.+++.|.++++.++.+
T Consensus 22 ~RR~~in~~f~~Lr~lvP~~~~---~------k~sK~~iL~~Ai~YI~~L~~~~~~L~~e~~~L~~~ 79 (80)
T 1hlo_A 22 KRRDHIKDSFHSLRDSVPSLQG---E------KASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQ 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHSGGGTT---S------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHCcCCCC---C------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4667778889999998874432 0 13457888888899989988888888888888754
No 195
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=28.42 E-value=48 Score=27.73 Aligned_cols=20 Identities=25% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 019120 150 KAESIHQYVETMKTAYLADQ 169 (346)
Q Consensus 150 rva~LHe~Ve~lKe~YL~~~ 169 (346)
|.+..+++..+||+.|.+++
T Consensus 100 kAqa~Eerf~KLKe~yteLr 119 (120)
T 3i00_A 100 KAQANEQRYSKLKEKYSELV 119 (120)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 44455666667777765543
No 196
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=28.07 E-value=1e+02 Score=30.56 Aligned_cols=64 Identities=6% Similarity=0.000 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 96 FEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVET 160 (346)
Q Consensus 96 FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~ 160 (346)
|-.+..+...||.|.|..|...-..+.+ ......++|-..++.+-+.+.+...+|..|+++.+.
T Consensus 204 F~~Da~EaesWL~eke~~l~s~y~~D~g-~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~ 267 (450)
T 3r6n_A 204 FFEEAQSTEAYLKGLQDSIRKKYPCDKN-MPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKK 267 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCcCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444556888888887744211111 111122334444444444455555555555554433
No 197
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=27.97 E-value=69 Score=24.54 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 92 TVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 92 lV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+.++|..|......|.+|..+|.
T Consensus 26 ~I~eLE~~L~~kd~eI~eLr~~Ld 49 (67)
T 1zxa_A 26 RIKELEKRLSEKEEEIQELKRKLH 49 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777777788888888877
No 198
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=27.93 E-value=1.6e+02 Score=20.71 Aligned_cols=26 Identities=15% Similarity=0.095 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+.+.++|.++..+...+.+++..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (60)
T 3htk_A 4 ANTKKTLENQVEELTEKCSLKTDEFL 29 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666666666666555544
No 199
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=27.80 E-value=1e+02 Score=22.33 Aligned_cols=36 Identities=8% Similarity=0.072 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 135 QVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 135 ~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
.-|.++-+...+||.||..|...-.++..+--.++|
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 457788888899999999997765555554444554
No 200
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=27.71 E-value=1.2e+02 Score=33.41 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+-+.+++++|...+..++++|..+.
T Consensus 863 ~~eL~el~~~L~~le~~l~ele~~l~ 888 (1184)
T 1i84_S 863 DEELQRTKERQQKAEAELKELEQKHT 888 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555544443
No 201
>3v2d_2 50S ribosomal protein L29; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_W 1vsa_W 2j03_2 2jl6_2 2jl8_2 2v47_2 2v49_2 2wdi_2 2wdj_2 2wdl_2 2wdn_2 2wh2_2 2wh4_2 2wrj_2 2wrl_2 2wro_2 2wrr_2 2x9s_2 2x9u_2 2xg0_2 ...
Probab=27.68 E-value=1.2e+02 Score=22.97 Aligned_cols=30 Identities=13% Similarity=0.096 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hcCCCCCcc
Q 019120 150 KAESIHQYVETMKTAYLADQR--RRGDGSDPF 179 (346)
Q Consensus 150 rva~LHe~Ve~lKe~YL~~~R--r~GD~~DPF 179 (346)
-.++|++++.++|.++.++|= ..|-..||-
T Consensus 17 s~eEL~~~L~elk~ELf~LR~q~atgql~n~~ 48 (72)
T 3v2d_2 17 SPVELEKLVREKKRELMELRFQASIGQLSQNH 48 (72)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 368899999999999999774 688777885
No 202
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=27.56 E-value=58 Score=28.10 Aligned_cols=26 Identities=19% Similarity=0.391 Sum_probs=19.3
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 85 PSAFLQQTVARFEKYLGEFRQWIEEL 110 (346)
Q Consensus 85 Ps~YF~qlV~~FE~rL~~YRqqIEEL 110 (346)
-.||..++-.+.++.|..||+.++=+
T Consensus 98 l~P~~~e~~~~~~~~~e~lr~~l~Py 123 (185)
T 3r2p_A 98 VQPYLDDFQKKWQEEMELYRQKVEPL 123 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 45788888888888888888766543
No 203
>1ucu_A Phase 1 flagellin; flagellar filament, cryo-electron microscopy, helical reconstruction, structural protein; 4.00A {Salmonella typhimurium} SCOP: e.32.1.1 PDB: 3a5x_A
Probab=27.53 E-value=1.6e+02 Score=29.33 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=52.5
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHH
Q 019120 93 VARFEKY---LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKT 163 (346)
Q Consensus 93 V~~FE~r---L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe 163 (346)
+.+|..+ |.+|.+.+.+....|+... ..+.++..+|+++.+.-|+.+ ...+.|.++|+.+++
T Consensus 50 a~~l~~~i~~l~q~~~N~~~~~s~lqtae---------~aL~~i~~~Lqr~relavqaangt~s~~dr~ai~~Ei~~l~~ 120 (494)
T 1ucu_A 50 ANRFTANIKGLTQASRNANDGISIAQTTE---------GALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLN 120 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 4444444 4555556666666666332 247889999999999999876 567888899999999
Q ss_pred HHHHHHH-hcCCCCCcc
Q 019120 164 AYLADQR-RRGDGSDPF 179 (346)
Q Consensus 164 ~YL~~~R-r~GD~~DPF 179 (346)
+.+..-. ..-+.+..|
T Consensus 121 ei~~ian~t~fnG~~Lf 137 (494)
T 1ucu_A 121 EIDRVSGQTQFNGVKVL 137 (494)
T ss_dssp HHHHHHHHCCBTTBCTT
T ss_pred HHHHHHhhCccCCeeee
Confidence 8777554 222334444
No 204
>3zcc_A HAMP, osmolarity sensor protein ENVZ; signaling protein, signal transduction, membrane protein, signalling, chimera; 1.25A {Archaeoglobus fulgidus} PDB: 3zrw_A 3zrv_A 3zrx_A 3zrw_B 2lfr_A 2lfs_A 1joy_A 2l7h_A 2l7i_A 2y20_A 2y21_A 2y0q_A 2y0t_A
Probab=27.37 E-value=1.7e+02 Score=20.82 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+.++++.|++-+...++.+++.++.+.
T Consensus 39 i~~l~~~~n~m~~~l~~~~~~~~~~~~ 65 (114)
T 3zcc_A 39 IGILAKSIERLRRSLKQLADDGTLLMA 65 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555444433
No 205
>1t3u_A Conserved hypothetical protein; NYSGXRC, unknown ORF, COG3027, PSI, protein structure initiative; 2.50A {Pseudomonas aeruginosa PAO1} SCOP: d.244.1.1 PDB: 1w2e_A
Probab=27.35 E-value=78 Score=24.79 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=21.1
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHH
Q 019120 80 GLPKKPSAFLQQTVARFEKYLGEFRQW 106 (346)
Q Consensus 80 ~~p~~Ps~YF~qlV~~FE~rL~~YRqq 106 (346)
.++.-.-+|+.+++..++++|..+++.
T Consensus 19 ~~~~~~ee~l~~aA~~vd~~~~~i~~~ 45 (104)
T 1t3u_A 19 NCPDDERANLESAARYLDGKMREIRSS 45 (104)
T ss_dssp CCCTTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 443334689999999999999988775
No 206
>2yfa_A MCPS, methyl-accepting chemotaxis transducer; receptor, chemoreceptor; 1.80A {Pseudomonas putida} PDB: 2yfb_A
Probab=27.29 E-value=2e+02 Score=24.61 Aligned_cols=23 Identities=17% Similarity=0.031 Sum_probs=13.6
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhh
Q 019120 93 VA-RFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 93 V~-~FE~rL~~YRqqIEELE~~L~ 115 (346)
++ +|++.+...++.|+++...+.
T Consensus 50 ~~~~~~~~l~~~~~~l~~~~~~~~ 73 (258)
T 2yfa_A 50 AAANTLAKLDAFSKQQAYLATTFK 73 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45 566666666666666655543
No 207
>1ug8_A Poly(A)-specific ribonuclease; R3H domain, poly(A)-specific 3'-exoribonuclease, PARN, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.68.7.1
Probab=27.23 E-value=35 Score=27.35 Aligned_cols=38 Identities=16% Similarity=0.203 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHHHHHhhchHH------------HHHHhhhccccccccC
Q 019120 3 RQKAQLQERMAVVKDMLRNTEI------------AVRSFMMLRPRFLHPN 40 (346)
Q Consensus 3 r~k~~~~~l~~~V~~~lrntE~------------Avrs~~~lr~rf~~~~ 40 (346)
-+|..|++++..|.++|.|.|. =-=.||+|++||-.-.
T Consensus 8 e~k~~id~i~~kIe~FL~s~~~~~l~l~pCN~f~RkLIYQ~~~~kfp~~i 57 (87)
T 1ug8_A 8 DQKKFIDQVIEKIEDFLQSEEKRSLELDPCTGFQRKLIYQTLSWKYPKGI 57 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCCEEECCCCCSHHHHHHHHHHHHHSSSSE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceecCCchHHHHHHHHHHHHHhcCCce
Confidence 4789999999999999999882 2225999999986543
No 208
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=27.10 E-value=3.8e+02 Score=24.77 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=15.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Q 019120 86 SAFLQQTVARFEKYLGEFRQWIE 108 (346)
Q Consensus 86 s~YF~qlV~~FE~rL~~YRqqIE 108 (346)
.||-.++..++.+.|+.||++++
T Consensus 32 ~P~~~~l~~~l~~~le~lr~~L~ 54 (273)
T 3s84_A 32 LPHANEVSQKIGDNLRELQQRLE 54 (273)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777777553
No 209
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=27.02 E-value=2.1e+02 Score=22.93 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHH
Q 019120 96 FEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFV---------HVAAKAESIHQYVETMKTA 164 (346)
Q Consensus 96 FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~Fv---------aLAArva~LHe~Ve~lKe~ 164 (346)
-|+|-..+++.|++|++-|.-... =...|.++++.+. +++.+|.++..+|+.++..
T Consensus 13 peqRkkkL~~Ki~el~~ei~ke~~-------------~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~e 77 (98)
T 2ke4_A 13 PEQQRKRLQQQLEERSRELQKEVD-------------QREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKLE 77 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-------------HHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 488888999999999888873321 1445556665544 4556666666666666554
No 210
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=26.70 E-value=3.4e+02 Score=24.15 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 134 PQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 134 ~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
...|..+..|.--|.-+++.+.++|+++++.-.+.++
T Consensus 70 ~~~i~~m~~yI~llrErea~lEqkVaeq~e~Ve~e~q 106 (169)
T 3k29_A 70 SDAILKMKAYIKVVAIQLSEEEEKVNKQKENVLAASK 106 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888888999888888888886665554
No 211
>2nps_B Syntaxin 13, vesicle-associated membrane protein 4; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Rattus norvegicus}
Probab=26.42 E-value=89 Score=23.10 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=19.7
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
...|...|..+|+.|..||.-|+.=.+-|+.+
T Consensus 8 i~~ie~~i~eL~~iF~dla~lV~eQge~id~I 39 (71)
T 2nps_B 8 IQQLEADILDVNQIFKDLAMMIHDQGDLIDSI 39 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34566667777777777777666544444443
No 212
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=26.11 E-value=1.1e+02 Score=27.90 Aligned_cols=50 Identities=22% Similarity=0.276 Sum_probs=30.4
Q ss_pred cccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCcc
Q 019120 130 LQSLPQVISNVHIFFVHVA--AKAESIHQYVETMKTAYLADQRRRG-----DGSDPF 179 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLA--Arva~LHe~Ve~lKe~YL~~~Rr~G-----D~~DPF 179 (346)
+.+|-.+|.++....-++. ..+..|++.|+....++++.-.++| ..-+||
T Consensus 112 ~~~LLpVlDnlerAl~~~~~~~~~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~F 168 (213)
T 4ani_A 112 ASDLLPVLDNFERALKIETDNEQAKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPF 168 (213)
T ss_dssp HHHHHHHHHHHHHHHSCCSCCSTHHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCC
T ss_pred HHHHhHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCC
Confidence 4455556666655543211 2356788888888888888666433 345677
No 213
>3zrx_A AF1503 protein, osmolarity sensor protein ENVZ; signaling protein, osmoregulation, OMPR, OMPC; 1.25A {Archaeoglobus fulgidus} PDB: 3zrv_A 3zrw_A 3zrw_B 2lfs_A 2lfr_A 1joy_A 2l7i_A 2y20_A 2l7h_A 2y21_A 2y0t_A 2y0q_A
Probab=26.10 E-value=1.6e+02 Score=20.86 Aligned_cols=28 Identities=0% Similarity=0.038 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019120 87 AFLQQTVARFEKYLGEFRQWIEELEQLI 114 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIEELE~~L 114 (346)
..|.++++++++.+...++.+.++-+.|
T Consensus 44 ~~~n~m~~~l~~~~~~~~~~~~~~shel 71 (115)
T 3zrx_A 44 KSIERLRRSLKQLADDRTLLMAGVSHDL 71 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555333344443333
No 214
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=25.85 E-value=2.1e+02 Score=21.33 Aligned_cols=68 Identities=9% Similarity=-0.009 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-cC-CCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL-LD-PDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVET 160 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~-s~-s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~ 160 (346)
..+-...|++.|..++..|+.|...-. +. .+ ..+ ......|...|..+++-+-.|..++..-+.++++
T Consensus 41 ~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~-~~~---~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~ 110 (119)
T 3uun_A 41 QFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTG-KLS---EDEETEVQEQMNLLNSRWECLRVASMEKQSNLHR 110 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456777777777777777665433 11 11 011 0112346666666666666665555544444443
No 215
>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}
Probab=25.77 E-value=50 Score=29.06 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLAD 168 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~ 168 (346)
|.++..+||+.-.+..+.++++-+.-.. ..+.+|-.++.++....-+....+..|++.|+....++++.
T Consensus 42 ~lR~~Ae~eN~rkR~~rE~e~~~~~a~e-----------~~~~~LLpVlDnlerAl~~~~~~~~~l~~Gv~m~~~~l~~~ 110 (177)
T 3a6m_A 42 YLRLLADFDNYRKRMEEELKAREREGVL-----------KALRALLPVLDDLDRALEFAEASPESIRQGVRAIRDGFFRI 110 (177)
T ss_dssp HHTTTTTTTTHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHhHHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 4555788888877777777776554330 23456667777777665443222567888888888888886
Q ss_pred HHhc-----CCCCCcc
Q 019120 169 QRRR-----GDGSDPF 179 (346)
Q Consensus 169 ~Rr~-----GD~~DPF 179 (346)
-.+. +..-+||
T Consensus 111 L~k~Gv~~i~~~Ge~F 126 (177)
T 3a6m_A 111 LAGLGVEEVPGEGEAF 126 (177)
T ss_dssp HHHTTCEECCCTTSBC
T ss_pred HHHCCCEEeCCCCCCC
Confidence 6543 3445677
No 216
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=25.73 E-value=1.8e+02 Score=26.77 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQ 112 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~ 112 (346)
|+.++|..+|+++...++.|-.+++
T Consensus 100 ~~~~li~pL~~kie~d~K~v~~~~K 124 (253)
T 2ykt_A 100 FHNELLTQLEQKVELDSRYLSAALK 124 (253)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444566666666665555554433
No 217
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=25.71 E-value=1.7e+02 Score=24.37 Aligned_cols=59 Identities=10% Similarity=0.100 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIH 155 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LH 155 (346)
+..|+.++.....||.+.|..|....-++.- ...+.|-...+.+...+.+-..+|..|.
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl----~~ve~LlkkH~~fe~~l~~~~e~i~~L~ 170 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLASGDFGHTV----DSVEKLIKRHEAFEKSTASWAERFAALE 170 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSH----HHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhccCCCCCCH----HHHHHHHHHHHHHHHHHHHhHHHHHHHh
No 218
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=25.66 E-value=1.4e+02 Score=26.02 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHH
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHI 142 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq 142 (346)
+|-+.||+-+.+-++||+.||+++...+... +. ..+..+...+..-.+
T Consensus 46 ~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~-~~---~~c~am~gli~e~~~ 93 (173)
T 2gyq_A 46 DLSQGLTSHLEETQKQIERLDQVFKKLGQKP-SG---VNCPAIDGLIKEADE 93 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-CS---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CC---CCchHHHHHHHHHHH
Confidence 4678899999999999999999999766421 11 234455555544444
No 219
>3c98_B Syntaxin-1A; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus}
Probab=25.30 E-value=3.2e+02 Score=23.31 Aligned_cols=29 Identities=17% Similarity=0.393 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 86 SAFLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 86 s~YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+||.+ |++....|..+...|++|.+...
T Consensus 43 ~ef~~~-ve~i~~~i~~i~~~v~el~~~~~ 71 (279)
T 3c98_B 43 DEFFEQ-VEEIRGFIDKIAENVEEVKRKHS 71 (279)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 456655 78888999999999999887644
No 220
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=25.18 E-value=1.2e+02 Score=22.75 Aligned_cols=35 Identities=11% Similarity=0.074 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 136 VISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 136 ~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
-|.++-+.=++||.||+.|...-.++-.+--.+++
T Consensus 12 q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 12 QLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888899999999997765554444444444
No 221
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=25.00 E-value=38 Score=22.18 Aligned_cols=13 Identities=46% Similarity=0.340 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhh
Q 019120 103 FRQWIEELEQLIL 115 (346)
Q Consensus 103 YRqqIEELE~~L~ 115 (346)
|.|.|.|||+.++
T Consensus 11 cdqeikelennir 23 (31)
T 2wh0_Q 11 CDQEIKELENNIR 23 (31)
T ss_pred hHHHHHHHHHHHH
Confidence 6789999999887
No 222
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=24.89 E-value=1.8e+02 Score=26.00 Aligned_cols=23 Identities=26% Similarity=0.403 Sum_probs=15.5
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhh
Q 019120 93 VARF-EKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 93 V~~F-E~rL~~YRqqIEELE~~L~ 115 (346)
+.+| +.+|..++..+..+|+...
T Consensus 143 l~~~l~~~~k~i~k~rkkl~~~rL 166 (256)
T 1zww_A 143 LQNLHDKDLREIQHHLKKLEGRRL 166 (256)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4554 5577777777777777554
No 223
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=24.78 E-value=1.8e+02 Score=25.01 Aligned_cols=29 Identities=21% Similarity=0.192 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-CCC
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILL-DPD 119 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s-~s~ 119 (346)
+|-..||+-+.+-++||+.||+++.. .+.
T Consensus 39 ~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~ 68 (166)
T 2gs4_A 39 KLSQAFHAHLEETHGQIERIDQVVESESNL 68 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46788999999999999999999997 664
No 224
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=24.78 E-value=2.9e+02 Score=25.46 Aligned_cols=69 Identities=10% Similarity=0.126 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQ-YVETMKTAYLADQ 169 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe-~Ve~lKe~YL~~~ 169 (346)
+-+++.+.++..+++.+++.++..... ++.+...-...++....+...++.|.+ +|..+|+..+.+.
T Consensus 192 k~~eK~~~k~~k~~~~~~~a~~~Y~~~------------v~~~n~~~~~~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~ 259 (350)
T 3aco_A 192 EQLKKLQDKIEKCKQDVLKTKEKYEKS------------LKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQ 259 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677777777666666655433210 111111112223334444445555554 3666666655555
Q ss_pred Hh
Q 019120 170 RR 171 (346)
Q Consensus 170 Rr 171 (346)
..
T Consensus 260 ~~ 261 (350)
T 3aco_A 260 KH 261 (350)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 225
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=24.75 E-value=3.6e+02 Score=23.77 Aligned_cols=66 Identities=12% Similarity=0.175 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 019120 94 ARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAE-SIHQYVETMKTAYLADQR 170 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva-~LHe~Ve~lKe~YL~~~R 170 (346)
..|++..-.|-.+|-+|+..... ..++.|-.-|+.++.+|-.-..-++ .+..+++.+...-.+.|+
T Consensus 172 k~f~~~~ldyv~~l~~l~~kk~~-----------e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~~l~~~l~~~r~ 238 (265)
T 2q12_A 172 KKQHQTMMHYFCALNTLQYKKKI-----------ALLEPLLGYMQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRR 238 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555543221 1244555666666555544433333 666666666555444444
No 226
>3ajm_A Programmed cell death protein 10; adaptor protein, dimerization, four-helix bundle, apoptosis; HET: 4IP; 2.30A {Homo sapiens} PDB: 3l8i_A 3rqe_A 3rqf_A 3rqg_A 3l8j_A
Probab=24.73 E-value=18 Score=33.41 Aligned_cols=56 Identities=16% Similarity=0.260 Sum_probs=40.5
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh----------cCCCCCccchhhH
Q 019120 129 LLQSLPQVISNVHIFFVHVAAKAESIHQY-VETMKTAYLADQRR----------RGDGSDPFLEADR 184 (346)
Q Consensus 129 tpQ~L~~~L~~~hq~FvaLAArva~LHe~-Ve~lKe~YL~~~Rr----------~GD~~DPFaEadr 184 (346)
+..+|..++..+-+....|...+...|.+ |+..|-+|..+.++ -|+.+.+|.+|++
T Consensus 123 tIKeIAsaIKklLDAvn~v~~~~~~~~k~~le~~KreFVkySKrFS~TLKeYFkd~~~~~Vf~SAn~ 189 (213)
T 3ajm_A 123 TIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANR 189 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhHhhHHHHHHHhcCCcceehHHHHH
Confidence 35667777777777777776666655554 99999999999874 4666777877764
No 227
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=24.68 E-value=3.1e+02 Score=24.03 Aligned_cols=37 Identities=14% Similarity=0.005 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 134 PQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 134 ~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~R 170 (346)
.....++.+.+..+-..++.....|++.|..|-..+|
T Consensus 115 ~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~ 151 (305)
T 2efl_A 115 KQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCK 151 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556666767777777778888888888876
No 228
>3ihr_A Ubiquitin carboxyl-terminal hydrolase isozyme L5; center for eukaryotic structural genomics, UCH37, UCH-L5, UB hydrolase, proteasome, INO80; 2.95A {Homo sapiens}
Probab=24.35 E-value=3.5e+02 Score=26.02 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCCCcc
Q 019120 143 FFVHVAAKAESIHQYVETMKTAYLADQR---RRGDGSDPF 179 (346)
Q Consensus 143 ~FvaLAArva~LHe~Ve~lKe~YL~~~R---r~GD~~DPF 179 (346)
.+-.++..+..|.+.|++.++....|+. ++...=.||
T Consensus 255 ~~~~~~~ei~~~~~~l~~E~~kr~~w~~En~rRrhny~pf 294 (328)
T 3ihr_A 255 MLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPF 294 (328)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH
Confidence 3445677777787777777776555543 333343444
No 229
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=24.33 E-value=2.5e+02 Score=21.72 Aligned_cols=41 Identities=0% Similarity=0.044 Sum_probs=23.5
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 129 LLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLADQ 169 (346)
Q Consensus 129 tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~~~ 169 (346)
-.+++..++.++..---.+-..+..|..+++.+.+.+-++.
T Consensus 64 v~~~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk 104 (117)
T 2zqm_A 64 VKTTKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELT 104 (117)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777776666555555555555555555555544433
No 230
>3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus}
Probab=24.28 E-value=2.6e+02 Score=25.97 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=14.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 131 QSLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 131 Q~L~~~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
++|...++.+.+....++..+++|...++++
T Consensus 76 ~~~~~~~~~q~~~~~~~~~~~~el~~~~~~~ 106 (341)
T 3zx6_A 76 NDLSSRTEQQAASLEETAASMEQLTATVKQN 106 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444433
No 231
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=24.27 E-value=31 Score=24.85 Aligned_cols=18 Identities=11% Similarity=0.126 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 019120 98 KYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 98 ~rL~~YRqqIEELE~~L~ 115 (346)
.++....+.|++||..|.
T Consensus 49 ~~~~~Le~ri~~Le~~l~ 66 (72)
T 2er8_A 49 ARNEAIEKRFKELTRTLT 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444555566666655
No 232
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.20 E-value=1.3e+02 Score=24.74 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 101 GEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 101 ~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
.||+.+|++|...+...++.-.. ...-..+|...|+.+.--.-.+=++-+.|...|.++...|-.
T Consensus 13 ~~y~~K~eel~~~~~~~~~~l~~--~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~ 77 (131)
T 3tnu_A 13 EWFFTKTEELNREVATNSELVQS--GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM 77 (131)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 37888888877765533321000 011233444555555544444544555555556666655543
No 233
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=24.07 E-value=1e+02 Score=32.95 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=43.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHH
Q 019120 84 KPSAFLQQTVARFEKYLGEFRQ--------------------WIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIF 143 (346)
Q Consensus 84 ~Ps~YF~qlV~~FE~rL~~YRq--------------------qIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~ 143 (346)
.---|||-+..-||-+...+|. .+||||....+-.-=+.+.+. ..|..+......++++
T Consensus 504 ~ve~Yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~-~Lpeymk~~f~aL~~~ 582 (785)
T 3s9v_A 504 VTEIYFSPASFIFEPEFSKCREVYTKTSNFTVILDDLYDAHGSLDDLKLFTESVKRWDLSLVD-QMPQQMKICFVGFYNT 582 (785)
T ss_dssp HHHHHHHHHHHSCSGGGHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSSSSGG-GSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHcCchhhh-cCChhHHHHHHHHHHH
Confidence 3455888888777766665554 468888765421100111121 3577777888888888
Q ss_pred HHHHHHHHHH
Q 019120 144 FVHVAAKAES 153 (346)
Q Consensus 144 FvaLAArva~ 153 (346)
|..++.++..
T Consensus 583 ~nei~~~~~~ 592 (785)
T 3s9v_A 583 FNDIAKEGRE 592 (785)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776654
No 234
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=23.74 E-value=3.8e+02 Score=23.72 Aligned_cols=55 Identities=11% Similarity=0.279 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHH----------HhhcCCCCCCCCC-CccccccHHHHHHHHHHHHHHHHHHH
Q 019120 97 EKYLGEFRQWIEELEQ----------LILLDPDRNSSSH-GSSLLQSLPQVISNVHIFFVHVAAKA 151 (346)
Q Consensus 97 E~rL~~YRqqIEELE~----------~L~s~s~~~~S~~-gs~tpQ~L~~~L~~~hq~FvaLAArv 151 (346)
+++++.+.+.+.|||. .|......+.... .....++|-...+..+..++.|+..+
T Consensus 65 ~~r~e~~~k~~~eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell~eL~~~Ck~~qp~i~~Li~e~ 130 (186)
T 1oxz_A 65 QKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDT 130 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCccccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4557777777777776 2222221111111 22467788899999999999998765
No 235
>3pp5_A BRK1, protein brick1; triple coiled-coil, precursor of the SCAR-WAVE complex, ABI, structural protein; 1.50A {Dictyostelium discoideum}
Probab=23.65 E-value=1.2e+02 Score=23.69 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 87 AFLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
+|+.+.-..-|.+|..+...|..||+.|.
T Consensus 34 ~FLN~F~~sce~KLa~ln~kL~~lE~~L~ 62 (73)
T 3pp5_A 34 EFLNKFELSTRNKLSDLNEKLTILDRQVD 62 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455555544444444443
No 236
>3m8j_A FOCB protein; all-alpha, helix-turn-helix, transcription; 1.40A {Escherichia coli}
Probab=23.62 E-value=1.5e+02 Score=24.69 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccchh
Q 019120 146 HVAAKAESIHQYVETMKTAYLADQRRRGDGSDPFLEA 182 (346)
Q Consensus 146 aLAArva~LHe~Ve~lKe~YL~~~Rr~GD~~DPFaEa 182 (346)
.--.+|+.+|+.|+++..-| .|..|-|+|+
T Consensus 79 ~~L~rL~~v~~~V~~l~~fY-------~~~~~~~~~~ 108 (111)
T 3m8j_A 79 TTLGRLTRLNVLVARLAPYY-------TDSVSAIAEA 108 (111)
T ss_dssp HHHHHHHHHHHHHHHHGGGG-------SCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHH-------cccccchhhh
Confidence 33467888888888877665 3445667665
No 237
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=23.14 E-value=3.2e+02 Score=26.01 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 019120 150 KAESIHQYVETMKT 163 (346)
Q Consensus 150 rva~LHe~Ve~lKe 163 (346)
||++|..+|.++..
T Consensus 444 ~~~~~~~~~~~~~~ 457 (471)
T 3mq9_A 444 KVEELEGEITTLNH 457 (471)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444433
No 238
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=23.08 E-value=3.1e+02 Score=26.17 Aligned_cols=23 Identities=13% Similarity=0.133 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 019120 93 VARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~ 115 (346)
-.++|+.+...++..+++++.++
T Consensus 369 ~~~le~~~~~~~~~~~~~~~~~~ 391 (487)
T 3oja_A 369 KKALDEQVSNGRRAHAELDGTLQ 391 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhhHH
Confidence 35677777777777777777776
No 239
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=23.07 E-value=2.5e+02 Score=23.23 Aligned_cols=16 Identities=6% Similarity=0.164 Sum_probs=12.9
Q ss_pred cHHHHHHHHHHHHHHH
Q 019120 132 SLPQVISNVHIFFVHV 147 (346)
Q Consensus 132 ~L~~~L~~~hq~FvaL 147 (346)
+|..-|.++|+|++.-
T Consensus 80 eiA~nL~~LY~y~~~~ 95 (131)
T 3iqc_A 80 EVAVYLTGLYTHQIKV 95 (131)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6888888999988843
No 240
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=23.06 E-value=3.7e+02 Score=25.54 Aligned_cols=15 Identities=7% Similarity=0.299 Sum_probs=10.0
Q ss_pred CCCccHHHHHHHHHH
Q 019120 82 PKKPSAFLQQTVARF 96 (346)
Q Consensus 82 p~~Ps~YF~qlV~~F 96 (346)
.-++.+||.++.+.|
T Consensus 218 ~~~~~~yf~~l~~~~ 232 (426)
T 1lrz_A 218 ADRDDKFYYNRLKYY 232 (426)
T ss_dssp ---CHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHh
Confidence 346889999998755
No 241
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=22.93 E-value=33 Score=22.65 Aligned_cols=25 Identities=36% Similarity=0.380 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQL 113 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~ 113 (346)
+.+.+.-+|++-..|.|.|..||+.
T Consensus 5 leqkiaaleqkcaaceqkiaaleqk 29 (32)
T 4g1a_A 5 LEQKIAALEQKCAACEQKIAALEQK 29 (32)
T ss_dssp HHHHHHHHHHHTSSHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566778888888888888888763
No 242
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=22.82 E-value=3.1e+02 Score=22.28 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 133 LPQVISNVHIFFVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 133 L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
|.+.+...+-.=+.|=.+|+.|.++|.=+|..|=.
T Consensus 74 lrK~lD~~~l~r~dLE~~iesL~eEl~FLKk~hee 108 (119)
T 3ol1_A 74 FRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE 108 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444445555666666666666555543
No 243
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=22.71 E-value=3.3e+02 Score=24.10 Aligned_cols=24 Identities=17% Similarity=0.218 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 144 FVHVAAKAESIHQYVETMKTAYLA 167 (346)
Q Consensus 144 FvaLAArva~LHe~Ve~lKe~YL~ 167 (346)
.-.|=+|++.|++.|+.+|+.+-.
T Consensus 92 ~~elq~ri~~L~~El~~~k~~~~k 115 (168)
T 3o0z_A 92 IGDLQARITSLQEEVKHLKHNLEK 115 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555777777777777775544
No 244
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=22.67 E-value=3.8e+02 Score=24.77 Aligned_cols=26 Identities=12% Similarity=0.313 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+...++.+.+.+|++.+++++..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~l~~~~~~l~ 187 (371)
T 3auy_A 162 EKCYQKMGEIVKEYEKRLERIEGELN 187 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455566677777777777766654
No 245
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=22.66 E-value=1.1e+02 Score=22.81 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=20.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETM 161 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~l 161 (346)
...|...|..+|+.|..||.-|+.=.+-|+.+
T Consensus 12 i~~ie~~i~eL~~iF~dla~lV~eQge~id~I 43 (77)
T 1jth_B 12 IIKLENSIRELHDMFMDMAMLVESQGEMIDRI 43 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34566777777777777777665544444433
No 246
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=22.61 E-value=1.9e+02 Score=27.73 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 019120 149 AKAESIHQYVETMKTAYLADQR 170 (346)
Q Consensus 149 Arva~LHe~Ve~lKe~YL~~~R 170 (346)
.+++.+..+|++++++...+..
T Consensus 33 ~~l~~~~~~i~~l~~~i~~l~~ 54 (323)
T 1lwu_C 33 EMWRVNQQFVTRLQQQLVDIRQ 54 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666665555444
No 247
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=22.29 E-value=2.4e+02 Score=20.78 Aligned_cols=14 Identities=7% Similarity=0.117 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHhh
Q 019120 102 EFRQWIEELEQLIL 115 (346)
Q Consensus 102 ~YRqqIEELE~~L~ 115 (346)
+|+.++|||...+.
T Consensus 32 ~y~~k~eel~~~~~ 45 (77)
T 3trt_A 32 WYKSKFADLSEAAN 45 (77)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46666666665544
No 248
>3v47_C Flagellin; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Salmonella enterica subsp}
Probab=22.26 E-value=1.1e+02 Score=30.63 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHH-hc
Q 019120 100 LGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVA------AKAESIHQYVETMKTAYLADQR-RR 172 (346)
Q Consensus 100 L~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLA------Arva~LHe~Ve~lKe~YL~~~R-r~ 172 (346)
|.+|.+.|.+-...|+... ..++++..+|+++.+.-|+.+ ...+.|.++|+.|+++-+.+-. ..
T Consensus 20 l~Qa~rN~~dgiS~lqtAE---------gAL~~i~~iLqRmRELaVQAaNgT~s~~DR~aIq~Ei~qL~~eI~~Ian~T~ 90 (425)
T 3v47_C 20 LTQASRNANDGISIAQTTE---------GALNEINNNLQRVRELSVQATNGTNSDSDLKSIQDEIQQRLEEIDRVSNQTQ 90 (425)
T ss_dssp ----CHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3344445555555555322 247788999999999998876 3678889999999998777654 22
Q ss_pred CCCCCcc
Q 019120 173 GDGSDPF 179 (346)
Q Consensus 173 GD~~DPF 179 (346)
-+.+..|
T Consensus 91 fNG~~Lf 97 (425)
T 3v47_C 91 FNGVKVL 97 (425)
T ss_dssp ETTEETT
T ss_pred cCCEEee
Confidence 3344455
No 249
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=22.17 E-value=3.5e+02 Score=22.63 Aligned_cols=67 Identities=7% Similarity=0.094 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIH 155 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LH 155 (346)
|..+-..||+...+...++++| ||.+.+...++.+ .++. ....+....|+.+-+.+..+...+..+.
T Consensus 59 f~~lh~~~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i 136 (167)
T 3ak8_A 59 FIAVHEMLDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAVVANDVRKAI 136 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667889999999999999988 5555555443321 1110 0113455566655555555544444443
No 250
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=22.11 E-value=3.2e+02 Score=22.99 Aligned_cols=15 Identities=7% Similarity=0.175 Sum_probs=10.8
Q ss_pred cHHHHHHHHHHHHHH
Q 019120 132 SLPQVISNVHIFFVH 146 (346)
Q Consensus 132 ~L~~~L~~~hq~Fva 146 (346)
+|..-|..+|+|++.
T Consensus 75 eiA~nL~~LY~y~~~ 89 (145)
T 1vh6_A 75 ELSASMGAMYDYMYR 89 (145)
T ss_dssp HHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 566777777777764
No 251
>3oq3_A IFN-alpha-5, interferon alpha-5; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Mus musculus} SCOP: a.26.1.3
Probab=22.08 E-value=2.8e+02 Score=24.08 Aligned_cols=46 Identities=13% Similarity=0.285 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHH
Q 019120 96 FEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHV 147 (346)
Q Consensus 96 FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaL 147 (346)
+|+=+....+|+++||.+|.-..+...+ +-.-......+..||-.+
T Consensus 82 le~fl~~L~qQl~~Le~Cl~~~~~~~~~------~l~~~~~~l~lkkYF~rI 127 (166)
T 3oq3_A 82 LDSFCNEVHQQLNDLKACVMQQVGVQES------PLTQEDSLLAVRKYFHRI 127 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSCCSS------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccC------ccccccchhHHHHHHHHH
Confidence 4445666779999999998744331111 111223345677788766
No 252
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=22.05 E-value=1.5e+02 Score=22.51 Aligned_cols=10 Identities=20% Similarity=0.471 Sum_probs=5.0
Q ss_pred HHHHHHHHhh
Q 019120 106 WIEELEQLIL 115 (346)
Q Consensus 106 qIEELE~~L~ 115 (346)
.|.+||..|.
T Consensus 30 ~i~~LE~~v~ 39 (70)
T 1gd2_E 30 HLKALETQVV 39 (70)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4555555543
No 253
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=21.94 E-value=1.1e+02 Score=25.39 Aligned_cols=15 Identities=20% Similarity=0.304 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHH
Q 019120 87 AFLQQTVARFEKYLG 101 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~ 101 (346)
.|+.++|..|-++..
T Consensus 41 ~~~~elv~~Fl~d~~ 55 (149)
T 1yvi_A 41 GFVSEVVTLFCDDAD 55 (149)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 477777777765543
No 254
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=21.91 E-value=70 Score=24.99 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=21.7
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 130 LQSLPQVISNVHIFFVHVAAKAESIHQYVETMKT 163 (346)
Q Consensus 130 pQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~lKe 163 (346)
+..|...+...+-.=+.|=++|+.|.++|.=+|.
T Consensus 51 ~~~LrkdvD~a~l~r~dLE~kvesL~eEl~fLkk 84 (86)
T 3swk_A 51 LQSFRQDVDNASLARLDLERKVESLQEEIAFLKK 84 (86)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455566666665556777777777777765553
No 255
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=21.89 E-value=1.1e+02 Score=23.81 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
++++.+=.+.|.+-...|++||+.|.
T Consensus 25 q~~L~~K~eELr~kd~~I~eLEk~L~ 50 (72)
T 3nmd_A 25 QYALQEKIEELRQRDALIDELELELD 50 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444445666666555
No 256
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=21.76 E-value=1.2e+02 Score=24.46 Aligned_cols=28 Identities=18% Similarity=0.353 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHhhhcc
Q 019120 6 AQLQERMAVVKDMLRNTEIAVRSFMMLR 33 (346)
Q Consensus 6 ~~~~~l~~~V~~~lrntE~Avrs~~~lr 33 (346)
..|+.-...++..+.+.+.++.....|.
T Consensus 18 ~~l~~~~~~l~~~i~e~~~~~e~l~~l~ 45 (133)
T 1fxk_C 18 ELIQQQMEAVRATISELEILEKTLSDIQ 45 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445555666777777777777766554
No 257
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=21.68 E-value=1.2e+02 Score=22.87 Aligned_cols=27 Identities=22% Similarity=0.243 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
..++.+-++++++...++|++|++.+.
T Consensus 37 ~~~~~~~L~~~~~~l~~~i~~L~~~~~ 63 (99)
T 1q08_A 37 CQESKGIVQERLQEVEARIAELQSMQR 63 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
No 258
>3rmi_A Chorismate mutase protein; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid; 2.40A {Bartonella henselae}
Probab=21.68 E-value=3.2e+02 Score=22.03 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 019120 95 RFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~L~ 115 (346)
...+.|..+|++|++|.+.|.
T Consensus 9 ~~~~~L~~lR~~ID~ID~~il 29 (114)
T 3rmi_A 9 KILSELAYLRQSIDNFDITLI 29 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHH
Confidence 456678889999988887665
No 259
>3p8c_E Probable protein brick1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=21.49 E-value=1.4e+02 Score=23.43 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 019120 94 ARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 94 ~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+++++|+...+.|+-||..|.
T Consensus 48 a~ln~KL~~LEr~L~iLEAkls 69 (75)
T 3p8c_E 48 ATLNEKLTALERRIEYIEARVT 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444445555555444
No 260
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A
Probab=21.46 E-value=1.8e+02 Score=31.11 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYVET 160 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~Ve~ 160 (346)
+.....+++++|+.+++.|+.+|..|...+= - ..+|+++... -.+-...+-++++.|.++++.
T Consensus 798 ~~~~~~rl~k~~~~~~~~~~~~~~~l~~~~f--~----~~ap~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 860 (862)
T 1gax_A 798 VEEWRRRQEKRLKELLALAERSQRKLASPGF--R----EKAPKEVVEA---EEARLKENLEQAERIREALSQ 860 (862)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTT--S----SSSCTTHHHH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCchh--h----hhCCHHHHHH---HHHHHHHHHHHHHHHHHHHHh
Confidence 5677899999999999999999998773221 1 1346555333 223233334445555555544
No 261
>3uv4_A Second bromodomain of human transcription initiat TFIID subunit 1 (TAF1); structural genomics consortium, SGC; 1.89A {Homo sapiens} PDB: 3hmh_A
Probab=21.46 E-value=79 Score=26.95 Aligned_cols=27 Identities=26% Similarity=0.297 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLILL 116 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~s 116 (346)
.++...|++.|.+++.++.+||+.+..
T Consensus 117 ~~L~~~~~~~l~e~~~~l~~le~~i~~ 143 (158)
T 3uv4_A 117 QEIVNVCYQTLTEYDEHLTQLEKDICT 143 (158)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788888888888888887773
No 262
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=21.40 E-value=3.6e+02 Score=22.58 Aligned_cols=73 Identities=11% Similarity=0.140 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCC--------CCCc--cccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 89 LQQTVARFEKYLGEFRQWIEEL-EQLILLDPDRNSS--------SHGS--SLLQSLPQVISNVHIFFVHVAAKAESIHQY 157 (346)
Q Consensus 89 F~qlV~~FE~rL~~YRqqIEEL-E~~L~s~s~~~~S--------~~gs--~tpQ~L~~~L~~~hq~FvaLAArva~LHe~ 157 (346)
|..+-..||+...+.+..+++| ||.+.+...++.+ .+.. ...-+....|+.+-+.+..+...+..+.+.
T Consensus 53 F~~lH~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~ 132 (164)
T 4eve_A 53 FFNVHKATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNT 132 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667889999999999999998 5555444433221 0000 011145666666666666666666555555
Q ss_pred HHHH
Q 019120 158 VETM 161 (346)
Q Consensus 158 Ve~l 161 (346)
.++.
T Consensus 133 aee~ 136 (164)
T 4eve_A 133 AEKE 136 (164)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 4443
No 263
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=21.20 E-value=2.5e+02 Score=21.72 Aligned_cols=27 Identities=4% Similarity=0.278 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 019120 93 VARFEKYLGEFRQWIEELEQLILLDPD 119 (346)
Q Consensus 93 V~~FE~rL~~YRqqIEELE~~L~s~s~ 119 (346)
.-+||.-+.-|..-|++|++||....+
T Consensus 25 ~GnYdta~~yY~g~~~qI~k~l~~~~d 51 (78)
T 2rpa_A 25 LGNYDSAMVYYQGVLDQMNKYLYSVKD 51 (78)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred hcChHHHHHHHHHHHHHHHHHHHhcCC
Confidence 345788899999999999999996653
No 264
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=21.07 E-value=1.6e+02 Score=27.86 Aligned_cols=53 Identities=11% Similarity=0.150 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHH
Q 019120 87 AFLQQTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES 153 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~ 153 (346)
-||..|+++ .+.+.+++..|++.-..|...+ .+ .-+++.+|+.|+.|-.+|+.
T Consensus 96 ~ylE~Ll~~-~~e~~r~~~~~~~s~~~L~~~G-----------~~--~~~~eDF~d~f~ell~~i~~ 148 (284)
T 4dhi_B 96 GLIEIMLKD-RARLEKFIASSRDWTRTLVELG-----------FP--DWTCTDFCDFFIEFLEKIHS 148 (284)
T ss_dssp HHHHHHHHC-HHHHHHHHHHHHHHHHHHHHTT-----------CC--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-HHHHHHHHHHHHHHHHHHHHCC-----------Cc--hhhHHHHHHHHHHHHHHHhc
Confidence 677777764 5567777777776555554221 11 23678999999988777753
No 265
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=21.01 E-value=5.7e+02 Score=24.70 Aligned_cols=19 Identities=16% Similarity=0.282 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 019120 95 RFEKYLGEFRQWIEELEQL 113 (346)
Q Consensus 95 ~FE~rL~~YRqqIEELE~~ 113 (346)
-|.+-+..|+.|+..-|+.
T Consensus 165 af~~~~~~f~~q~~~~e~~ 183 (373)
T 3hhm_B 165 AFNETIKIFEEQCQTQERY 183 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444455666666666654
No 266
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=20.96 E-value=1.5e+02 Score=27.21 Aligned_cols=63 Identities=24% Similarity=0.240 Sum_probs=46.7
Q ss_pred hhHHHHHHHH-HHHHHHhhchHHHHHHhhhccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccchhhccCC
Q 019120 3 RQKAQLQERM-AVVKDMLRNTEIAVRSFMMLRPRFLHPNAGSASSATAPSQASGATAAPSSTGQPASSSVVPVFDFYRGL 81 (346)
Q Consensus 3 r~k~~~~~l~-~~V~~~lrntE~Avrs~~~lr~rf~~~~~~~~~~~~~~~~~~g~~~~~~~~~qp~~~~~~pv~Dfys~~ 81 (346)
|.|.+|++.- ..|.++||.-+.|.+.|..|.-. |
T Consensus 25 ~Ak~~Le~~hr~k~~~VmkEW~eae~q~k~l~ka----------------------------------------d----- 59 (211)
T 3umh_A 25 KAKERLEAKHRERMSQVMREWEEAERQAKNLPKA----------------------------------------D----- 59 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHH----------------------------------------H-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh----------------------------------------H-----
Confidence 5677775553 68899999999999977755221 1
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 82 PKKPSAFLQQTVARFEKYLGEFRQWIEEL 110 (346)
Q Consensus 82 p~~Ps~YF~qlV~~FE~rL~~YRqqIEEL 110 (346)
.+.=.+=|+++|..+|+....-|++++|+
T Consensus 60 kk~~~~rFQ~~v~aLE~E~~~ErqqL~et 88 (211)
T 3umh_A 60 KKAVIQHFQEKVESLEQEAANERQQLVET 88 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 01114578999999999999999998875
No 267
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=20.75 E-value=2.7e+02 Score=20.78 Aligned_cols=66 Identities=8% Similarity=-0.017 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLIL-LDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAESIHQYV 158 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~-s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~LHe~V 158 (346)
.+-...|++.|..++..|+.|...-. +... ++........|...|..+++-+-.|..++..-..++
T Consensus 42 l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~---~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L 108 (118)
T 3uul_A 42 FATHETFMMELSAHQSSVGSVLQAGNQLMTQ---GTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRL 108 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677788888777777755432 1110 111001123466666666666666655554444443
No 268
>1r8i_A TRAC; VIRB5, helical bundle, structural protein; 3.00A {Escherichia coli} SCOP: a.8.7.1
Probab=20.70 E-value=99 Score=27.33 Aligned_cols=29 Identities=7% Similarity=0.158 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019120 90 QQTVARFEKYLGEFRQWIEELEQLILLDP 118 (346)
Q Consensus 90 ~qlV~~FE~rL~~YRqqIEELE~~L~s~s 118 (346)
.+.+.++-+++..|++||+++++.+.+..
T Consensus 14 ~~q~~q~~~Ql~~~k~Ql~q~k~qy~slt 42 (213)
T 1r8i_A 14 GEQLEQMAQQLEQLKSQLETQKNMYESMA 42 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667888899999999999999888443
No 269
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=20.70 E-value=1.2e+02 Score=23.68 Aligned_cols=19 Identities=26% Similarity=0.221 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 019120 153 SIHQYVETMKTAYLADQRR 171 (346)
Q Consensus 153 ~LHe~Ve~lKe~YL~~~Rr 171 (346)
.|.+-.+..|+.|..+.++
T Consensus 49 ~l~ql~~rQrd~Y~dLD~R 67 (83)
T 2xdj_A 49 QLNQVVERQKQILLQIDSL 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444466778888887654
No 270
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=20.59 E-value=1.3e+02 Score=23.66 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=27.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 85 PSAFLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 85 Ps~YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
=.+=+.++|.+.|..|..-..+|.|||..+-
T Consensus 15 treELi~l~lk~~~~l~~k~~~v~eLEdYID 45 (75)
T 3tso_C 15 TYEEVLQELVKHKELLRRKDTHIRELEDYID 45 (75)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999998654
No 271
>4acr_A Glypican-1; proteoglycan, glycosaminoglycans, heparan sulfate, helical B glycoprotein, membrane protein; HET: NAG; 2.55A {Homo sapiens} PDB: 4ad7_A*
Probab=20.59 E-value=3e+02 Score=28.00 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccccccHHHHHHHHHHHHHHHHHHHHH-HHH------------H
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLILLDPDRNSSSHGSSLLQSLPQVISNVHIFFVHVAAKAES-IHQ------------Y 157 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~s~s~~~~S~~gs~tpQ~L~~~L~~~hq~FvaLAArva~-LHe------------~ 157 (346)
+=-.+||++|+.--++ |+|++|+..+. ..--.|....+.++++|..|....+. ||+ .
T Consensus 67 CCT~~MEe~l~~~s~~--~~e~~v~~~s~--------~L~~~l~~~~~~F~e~F~~Ll~~se~~l~~~F~~~Yg~ly~q~ 136 (478)
T 4acr_A 67 CCTSEMEENLANRSHA--ELETALRDSSR--------VLQAMLATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQN 136 (478)
T ss_dssp SCCHHHHHHHHHHHHH--HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSTHHHHHH
T ss_pred cCCHHHHHHHHHHHHH--HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999876665 88888884331 11223556667777888777555432 222 1
Q ss_pred HHHHHHHHHHHHH-hcCCCCC
Q 019120 158 VETMKTAYLADQR-RRGDGSD 177 (346)
Q Consensus 158 Ve~lKe~YL~~~R-r~GD~~D 177 (346)
..-..+.|-++++ ..|...|
T Consensus 137 ~~~f~~LF~~L~~Yy~G~~v~ 157 (478)
T 4acr_A 137 ARAFRDLYSELRLYYRGANLH 157 (478)
T ss_dssp HHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCCC
Confidence 3335667888888 5665443
No 272
>2vz4_A Tipal, HTH-type transcriptional activator TIPA; transcription, resistance, antibiotic; 2.90A {Streptomyces lividans}
Probab=20.37 E-value=1.1e+02 Score=23.86 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
.+.+-.+.+++++.+.++.++.||+.+.
T Consensus 78 ~l~~~~~~l~~~i~~l~~~~~~l~~~~~ 105 (108)
T 2vz4_A 78 HLRRQHELLSARIGKLQKMAAAVEQAME 105 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566666666666666665554
No 273
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=20.13 E-value=92 Score=26.57 Aligned_cols=30 Identities=7% Similarity=0.169 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019120 88 FLQQTVARFEKYLGEFRQWIEELEQLILLD 117 (346)
Q Consensus 88 YF~qlV~~FE~rL~~YRqqIEELE~~L~s~ 117 (346)
-|.+..+++.+++.++++.|++||..+.-.
T Consensus 165 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~ 194 (203)
T 3qks_A 165 KFETAYKKLSELKKTINNRIKEYRDILART 194 (203)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456778889999999999999999998833
No 274
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=20.06 E-value=1.6e+02 Score=21.49 Aligned_cols=29 Identities=34% Similarity=0.334 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 87 AFLQQTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 87 ~YF~qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
--+..+|.++|++-..+.+-|..||+-+.
T Consensus 20 aklenivarlendnanlekdianlekdia 48 (56)
T 3he4_A 20 AKLENIVARLENDNANLEKDIANLEKDIA 48 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 34667888888888777777777777654
No 275
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=20.04 E-value=1.7e+02 Score=22.64 Aligned_cols=25 Identities=12% Similarity=0.104 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 019120 91 QTVARFEKYLGEFRQWIEELEQLIL 115 (346)
Q Consensus 91 qlV~~FE~rL~~YRqqIEELE~~L~ 115 (346)
++=.+|+.+|..|+..|.++|..|.
T Consensus 21 e~E~~~~~~l~~~q~~i~~lE~el~ 45 (86)
T 1x8y_A 21 DLEDSLARERDTSRRLLAEKEREMA 45 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566667777777776655
Done!