BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 019123
         (346 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224130454|ref|XP_002320841.1| predicted protein [Populus trichocarpa]
 gi|222861614|gb|EEE99156.1| predicted protein [Populus trichocarpa]
          Length = 303

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 228/317 (71%), Positives = 262/317 (82%), Gaps = 18/317 (5%)

Query: 31  MGSNSISKMAARHLRILSGCNGALL--SVRFFSDSTLAQEPIASTAIDSASVSPSINTAE 88
           M    +SK+  ++L+I    N   L  + RFFS     ++P+++           ++T +
Sbjct: 1   MALKLLSKLRNQNLQITRNRNHHRLVDAARFFS-----EQPVSN-----------LSTPD 44

Query: 89  NHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH 148
           +   +  NK+ +  SSLK  ELAKF+AI+DTWWD+EGP+KPLH +NPTRLAFIRSTLCRH
Sbjct: 45  DSKFIIKNKQQTTTSSLKQHELAKFAAISDTWWDSEGPFKPLHNMNPTRLAFIRSTLCRH 104

Query: 149 FRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET 208
           F KDP  ARPFEGL IVDVGCGGGILSEPLARMGATVTG+DAVEKNI +ARLHADLDPET
Sbjct: 105 FSKDPNCARPFEGLKIVDVGCGGGILSEPLARMGATVTGVDAVEKNINVARLHADLDPET 164

Query: 209 STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
           STIEYCCTTAEKLVEEQRKFDAVIA EVIEHVA PAEFCKSL+AL    GATVISTINRS
Sbjct: 165 STIEYCCTTAEKLVEEQRKFDAVIALEVIEHVAAPAEFCKSLAALAYPGGATVISTINRS 224

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
           MRAYATAI+AAE++L+WLPKGTHQWSSFLTPEELVLILQRASI+VKEMAGFVY+PLTGRW
Sbjct: 225 MRAYATAIVAAEYLLNWLPKGTHQWSSFLTPEELVLILQRASINVKEMAGFVYSPLTGRW 284

Query: 329 SLSDDISVNFIAFGTKN 345
           SLSDDISVNFIA+GTK+
Sbjct: 285 SLSDDISVNFIAYGTKD 301


>gi|359806495|ref|NP_001241254.1| uncharacterized protein LOC100783802 [Glycine max]
 gi|255639594|gb|ACU20091.1| unknown [Glycine max]
          Length = 291

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/244 (85%), Positives = 231/244 (94%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SSLKH ELAKF+AIADTWWD+EGP+KPLH +NPTRLAFIRS LCRHF+KDPY+A+P EGL
Sbjct: 45  SSLKHNELAKFAAIADTWWDSEGPFKPLHVMNPTRLAFIRSALCRHFKKDPYNAKPLEGL 104

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGGILSEPLAR+GATVTG+DAVEKNIKIA+LHA LDP TS+IE+CCTTAEKLV
Sbjct: 105 KIIDVGCGGGILSEPLARLGATVTGVDAVEKNIKIAQLHAGLDPATSSIEFCCTTAEKLV 164

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EE R FDAV+A EVIEHVADPAEFCKSLSALTV EGATVISTINRSMRAYATAI+AAE+I
Sbjct: 165 EEGRTFDAVMALEVIEHVADPAEFCKSLSALTVPEGATVISTINRSMRAYATAIVAAEYI 224

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQWSSFLTPEELVLILQRA I+V+EMAGFVYNP+TGRWSLSDDISVNFIAFG
Sbjct: 225 LRWLPRGTHQWSSFLTPEELVLILQRAGINVEEMAGFVYNPVTGRWSLSDDISVNFIAFG 284

Query: 343 TKNS 346
           TK++
Sbjct: 285 TKSN 288


>gi|356553466|ref|XP_003545077.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Glycine max]
          Length = 298

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 212/259 (81%), Positives = 235/259 (90%), Gaps = 1/259 (0%)

Query: 87  AENHSQLNNNKKHSAPSS-LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL 145
           A + SQ    ++ SAPSS LKH ELAKF+AIADTWWD+EGP+KPLH +NPTRLAFIRS L
Sbjct: 40  ASSMSQPQPKQQPSAPSSSLKHNELAKFAAIADTWWDSEGPFKPLHVMNPTRLAFIRSAL 99

Query: 146 CRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD 205
           CRHF+KDPYSA+P EGL IVDVGCGGGILSEPLAR+GATVTG+DAVEKNIKIA+LHA LD
Sbjct: 100 CRHFKKDPYSAKPLEGLKIVDVGCGGGILSEPLARLGATVTGVDAVEKNIKIAQLHAGLD 159

Query: 206 PETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTI 265
           P TS+IE+CCTTAEKLVEE R FDAV+A EVIEHVADPAEFCKSLSALTV +GATVISTI
Sbjct: 160 PATSSIEFCCTTAEKLVEEGRTFDAVMALEVIEHVADPAEFCKSLSALTVPDGATVISTI 219

Query: 266 NRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLT 325
           NRSMRAY TAI+AAE+IL WLP+GTHQWSSFLTPEELVLILQRA I+V+EMAG +YNP+T
Sbjct: 220 NRSMRAYTTAIVAAEYILRWLPRGTHQWSSFLTPEELVLILQRAGINVEEMAGIMYNPVT 279

Query: 326 GRWSLSDDISVNFIAFGTK 344
           G WSLSDDISVNFIAFGTK
Sbjct: 280 GGWSLSDDISVNFIAFGTK 298


>gi|388502590|gb|AFK39361.1| unknown [Lotus japonicus]
          Length = 276

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/266 (79%), Positives = 236/266 (88%), Gaps = 4/266 (1%)

Query: 83  SINTAENHSQLNNNKKHSAP----SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRL 138
           ++N+  N   L N ++ S      SSL   ELAKF+AIA+TWWD+EGP+KPLH +NPTRL
Sbjct: 6   NLNSITNRRILLNARRFSYAAKEHSSLNRNELAKFAAIAETWWDSEGPFKPLHVMNPTRL 65

Query: 139 AFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIA 198
           AFIRS LCRHF+KDP SA+P EGL IVDVGCGGGILSEPLAR+GATVTG+DAVEKNIKIA
Sbjct: 66  AFIRSVLCRHFKKDPCSAKPLEGLKIVDVGCGGGILSEPLARLGATVTGVDAVEKNIKIA 125

Query: 199 RLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEG 258
           RLHADLDP TS+IEYCCTTAE LVEE RKFDAV+A EVIEHV DPAEFCKSL+ALT+S+G
Sbjct: 126 RLHADLDPTTSSIEYCCTTAETLVEEGRKFDAVMALEVIEHVTDPAEFCKSLAALTISDG 185

Query: 259 ATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
           ATVISTINRSMRAYATAI+AAE+IL WLP+GTH+WSSFLTPEELVLILQRA I+V+ MAG
Sbjct: 186 ATVISTINRSMRAYATAIVAAEYILRWLPRGTHEWSSFLTPEELVLILQRAGINVEGMAG 245

Query: 319 FVYNPLTGRWSLSDDISVNFIAFGTK 344
           FVYNPLTGRWSLSDDISVNFIAFGTK
Sbjct: 246 FVYNPLTGRWSLSDDISVNFIAFGTK 271


>gi|357494359|ref|XP_003617468.1| Hexaprenyldihydroxybenzoate methyltransferase [Medicago truncatula]
 gi|355518803|gb|AET00427.1| Hexaprenyldihydroxybenzoate methyltransferase [Medicago truncatula]
          Length = 303

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/287 (73%), Positives = 240/287 (83%), Gaps = 22/287 (7%)

Query: 58  RFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIA 117
           +FFSDS+L Q+P           +P +            ++   PSSL   ELAKF+AIA
Sbjct: 34  KFFSDSSLPQQP----------TTPHV------------QQPPPPSSLNRNELAKFAAIA 71

Query: 118 DTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEP 177
           +TWWD+EGP+KPLH +NPTRLAF+RS LCRHF+KDPYSA+P EGL IVDVGCGGGILSEP
Sbjct: 72  ETWWDSEGPFKPLHVMNPTRLAFVRSALCRHFKKDPYSAKPLEGLKIVDVGCGGGILSEP 131

Query: 178 LARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVI 237
           LARMGATVTG+DAVEKNI IARLHA+ DP TSTIE+CCTTAEKLVEE RKFDAV+A EVI
Sbjct: 132 LARMGATVTGVDAVEKNINIARLHAESDPTTSTIEFCCTTAEKLVEEGRKFDAVMALEVI 191

Query: 238 EHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFL 297
           EHVA+PAEFCKSL+ALT+ +GAT+ISTINRSMRAYATAI+AAE+IL WLP GTH+WS FL
Sbjct: 192 EHVAEPAEFCKSLAALTIPDGATIISTINRSMRAYATAIVAAEYILRWLPTGTHEWSKFL 251

Query: 298 TPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           TPEELVLILQRA I+V+EMAGF YNP+TGRWSLSDDISVNFIA GTK
Sbjct: 252 TPEELVLILQRAGINVEEMAGFAYNPVTGRWSLSDDISVNFIAMGTK 298


>gi|15224587|ref|NP_180649.1| Hexaprenyldihydroxybenzoate methyltransferase [Arabidopsis
           thaliana]
 gi|21264383|sp|O49354.2|COQ3_ARATH RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-n 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; AltName: Full=Protein EMBRYO
           DEFECTIVE 3002; Flags: Precursor
 gi|3201619|gb|AAC20726.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
           thaliana]
 gi|15027943|gb|AAK76502.1| putative dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
           thaliana]
 gi|20259179|gb|AAM14305.1| putative dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
           thaliana]
 gi|330253364|gb|AEC08458.1| Hexaprenyldihydroxybenzoate methyltransferase [Arabidopsis
           thaliana]
          Length = 322

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/263 (74%), Positives = 231/263 (87%), Gaps = 1/263 (0%)

Query: 82  PSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI 141
           P I T E  +  N ++  S+ +SL   ELAKFSAIADTWW +EGP+KPLH +NPTRLAFI
Sbjct: 54  PKIQTLEGKAS-NKSRSTSSTTSLNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFI 112

Query: 142 RSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH 201
           RSTLCRHF KDP SA+PFEGL  +D+GCGGG+LSEPLARMGATVTG+DAV+KN+KIARLH
Sbjct: 113 RSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLH 172

Query: 202 ADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
           AD+DP TSTIEY CTTAEKL +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GATV
Sbjct: 173 ADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATV 232

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           +STINR+MRAYA+ I+ AE+IL WLPKGTHQWSSF+TPEE+ +ILQRAS+DVKE+AGFVY
Sbjct: 233 LSTINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVY 292

Query: 322 NPLTGRWSLSDDISVNFIAFGTK 344
           NP+TGRW LSDDISVN+IA+GTK
Sbjct: 293 NPITGRWLLSDDISVNYIAYGTK 315


>gi|2832402|emb|CAA75340.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
           thaliana]
          Length = 322

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/263 (74%), Positives = 230/263 (87%), Gaps = 1/263 (0%)

Query: 82  PSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI 141
           P I T E  +  N ++  S+ +SL   ELAKFSAIADTWW +EGP+KPLH +NPTRLAFI
Sbjct: 54  PKIQTLEGKAS-NKSRSTSSTTSLNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFI 112

Query: 142 RSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH 201
           RSTLCRHF KDP SA+PFEGL  +D+GCGGG+LSEPLARMGATVTG+DAV+KN+KIARLH
Sbjct: 113 RSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLH 172

Query: 202 ADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
           AD+DP TSTIEY CTTAEKL +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GATV
Sbjct: 173 ADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATV 232

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           +STINR+MRAYA+ I+ AE+IL WLPKGTHQWSSF+TPEE+ +ILQRAS+DVKE+AGFVY
Sbjct: 233 LSTINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVY 292

Query: 322 NPLTGRWSLSDDISVNFIAFGTK 344
           NP+TGRW LSDDISVN+I +GTK
Sbjct: 293 NPITGRWLLSDDISVNYITYGTK 315


>gi|21536690|gb|AAM61022.1| dihydroxypolyprenylbenzoate methyltransferase [Arabidopsis
           thaliana]
          Length = 322

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 196/263 (74%), Positives = 230/263 (87%), Gaps = 1/263 (0%)

Query: 82  PSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI 141
           P I T E  +  N ++  S+ +SL   ELAKFSAIA TWW +EGP+KPLH +NPTRLAFI
Sbjct: 54  PKIQTLEGKAS-NKSRSTSSTTSLNEDELAKFSAIAHTWWHSEGPFKPLHQMNPTRLAFI 112

Query: 142 RSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH 201
           RSTLCRHF KDP SA+PFEGL  +D+GCGGG+LSEPLARMGATVTG+DAV+KN+KIARLH
Sbjct: 113 RSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLH 172

Query: 202 ADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
           AD+DP TSTIEY CTTAEKL +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GATV
Sbjct: 173 ADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATV 232

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           +STINR+MRAYA+ I+ AE+IL WLPKGTHQWSSF+TPEE+ +ILQRAS+DVKE+AGFVY
Sbjct: 233 LSTINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVY 292

Query: 322 NPLTGRWSLSDDISVNFIAFGTK 344
           NP+TGRW LSDDISVN+IA+GTK
Sbjct: 293 NPITGRWLLSDDISVNYIAYGTK 315


>gi|297826511|ref|XP_002881138.1| ATCOQ3 [Arabidopsis lyrata subsp. lyrata]
 gi|297326977|gb|EFH57397.1| ATCOQ3 [Arabidopsis lyrata subsp. lyrata]
          Length = 323

 Score =  422 bits (1086), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 193/263 (73%), Positives = 226/263 (85%)

Query: 82  PSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI 141
           P + T E  +   +    S  +SL   ELAKFSAIADTWW +EGP+KPLH +NPTRLAFI
Sbjct: 54  PKMQTLEGKASNKSRSTSSTTTSLNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFI 113

Query: 142 RSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH 201
           RSTLCRHF KDP SA+PFEGL  +D+GCGGG+LSEPLARMGATVTG+DAV+KN+KIARLH
Sbjct: 114 RSTLCRHFSKDPSSAKPFEGLRFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLH 173

Query: 202 ADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
           AD+DP TSTIEY CTTAE L +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GAT+
Sbjct: 174 ADMDPVTSTIEYLCTTAEMLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATI 233

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           +ST+NR+MRAYA+ I+ AE+IL WLPKGTHQWSSF+TPEEL +ILQ AS+DVKEMAGFVY
Sbjct: 234 LSTVNRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEELSMILQHASVDVKEMAGFVY 293

Query: 322 NPLTGRWSLSDDISVNFIAFGTK 344
           NP+TGRW LSDDISVN+IA+GTK
Sbjct: 294 NPITGRWLLSDDISVNYIAYGTK 316


>gi|357125282|ref|XP_003564324.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Brachypodium distachyon]
          Length = 329

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 192/249 (77%), Positives = 222/249 (89%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           + SA SSL  AE+AKF+AIA+TWWD++GP+KPLH +NPTRL+FIRSTLCRHFR+DPYSA+
Sbjct: 73  RGSAASSLNSAEVAKFAAIAETWWDSQGPFKPLHLMNPTRLSFIRSTLCRHFRRDPYSAK 132

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           P EGL ++DVGCGGGILSEPLARMGA VTGIDAV+KNIKIA++HA  DP T++IEYCCTT
Sbjct: 133 PLEGLKVIDVGCGGGILSEPLARMGAAVTGIDAVDKNIKIAQIHAASDPTTASIEYCCTT 192

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE LV+E  +FDAVI+ EVIEHVA+P EFCKSLSALTV  GATVISTINRSMRAYATAI+
Sbjct: 193 AEDLVKESNQFDAVISLEVIEHVANPLEFCKSLSALTVPNGATVISTINRSMRAYATAIV 252

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
           AAE+IL WLPKGTH+WS  +TPEEL L LQRASI V+EMAGFVYNPLTG WSLSDDIS+N
Sbjct: 253 AAEYILRWLPKGTHEWSKLVTPEELALALQRASISVQEMAGFVYNPLTGGWSLSDDISIN 312

Query: 338 FIAFGTKNS 346
           +IA+G K S
Sbjct: 313 YIAYGIKKS 321


>gi|449450876|ref|XP_004143188.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Cucumis sativus]
 gi|449521343|ref|XP_004167689.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 325

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/263 (77%), Positives = 230/263 (87%), Gaps = 2/263 (0%)

Query: 84  INTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRS 143
           + TA    ++N N   S  SS+   ELAKFSAI+DTWWDAEGP+KPLHALNPTR++FIRS
Sbjct: 61  LKTAPQPEKMNINA--STTSSVNQIELAKFSAISDTWWDAEGPFKPLHALNPTRVSFIRS 118

Query: 144 TLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD 203
           TLCRHFR+DP   RPFEGLN +DVGCGGGILSEPLARMGATVTGID V+KNIKIAR+HAD
Sbjct: 119 TLCRHFRRDPCLVRPFEGLNFIDVGCGGGILSEPLARMGATVTGIDMVDKNIKIARVHAD 178

Query: 204 LDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIS 263
            DP TSTIEY CTTAE LVE+Q++FDAVIASEVIEHVADPA FC+SL+ALTV+ GAT++S
Sbjct: 179 QDPVTSTIEYYCTTAENLVEQQKEFDAVIASEVIEHVADPAGFCQSLAALTVANGATIVS 238

Query: 264 TINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNP 323
           TINRSMRA+A AI+AAE+IL WLP GTHQWSS LTPEELVLILQRASI V+EMAGFVYNP
Sbjct: 239 TINRSMRAFAAAIVAAEYILRWLPIGTHQWSSLLTPEELVLILQRASISVEEMAGFVYNP 298

Query: 324 LTGRWSLSDDISVNFIAFGTKNS 346
           LTG+WSLSDD SVN+IAFG K S
Sbjct: 299 LTGQWSLSDDTSVNYIAFGKKIS 321


>gi|115466472|ref|NP_001056835.1| Os06g0152300 [Oryza sativa Japonica Group]
 gi|113594875|dbj|BAF18749.1| Os06g0152300 [Oryza sativa Japonica Group]
 gi|218197598|gb|EEC80025.1| hypothetical protein OsI_21708 [Oryza sativa Indica Group]
          Length = 327

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/242 (77%), Positives = 220/242 (90%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SSL  AE+AKF+AIA+TWWD+EGP+KPLH +NPTRL+FIRSTLCRHFR+DP S++P EGL
Sbjct: 77  SSLNPAEVAKFAAIAETWWDSEGPFKPLHLMNPTRLSFIRSTLCRHFRRDPNSSKPLEGL 136

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSEPLARMGATVTGIDAV+KNIKIAR+HA  DP T++IEY CTTAE LV
Sbjct: 137 KVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLV 196

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E ++FDAVI+ EVIEHVA+P+ FC+SLSALTV  GATVISTINRSMRAYATAI+AAE+I
Sbjct: 197 KENKQFDAVISLEVIEHVANPSGFCESLSALTVPNGATVISTINRSMRAYATAIVAAEYI 256

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L+WLPKGTHQWS  +TPEELVLIL+RASI V+EMAGFVYNPL G WSLSDD++VN+IA+G
Sbjct: 257 LNWLPKGTHQWSKLVTPEELVLILERASISVQEMAGFVYNPLRGEWSLSDDLTVNYIAYG 316

Query: 343 TK 344
            K
Sbjct: 317 MK 318


>gi|222634968|gb|EEE65100.1| hypothetical protein OsJ_20155 [Oryza sativa Japonica Group]
          Length = 410

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/242 (77%), Positives = 220/242 (90%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SSL  AE+AKF+AIA+TWWD+EGP+KPLH +NPTRL+FIRSTLCRHFR+DP S++P EGL
Sbjct: 160 SSLNPAEVAKFAAIAETWWDSEGPFKPLHLMNPTRLSFIRSTLCRHFRRDPNSSKPLEGL 219

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSEPLARMGATVTGIDAV+KNIKIAR+HA  DP T++IEY CTTAE LV
Sbjct: 220 KVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLV 279

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E ++FDAVI+ EVIEHVA+P+ FC+SLSALTV  GATVISTINRSMRAYATAI+AAE+I
Sbjct: 280 KENKQFDAVISLEVIEHVANPSGFCESLSALTVPNGATVISTINRSMRAYATAIVAAEYI 339

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L+WLPKGTHQWS  +TPEELVLIL+RASI V+EMAGFVYNPL G WSLSDD++VN+IA+G
Sbjct: 340 LNWLPKGTHQWSKLVTPEELVLILERASISVQEMAGFVYNPLRGEWSLSDDLTVNYIAYG 399

Query: 343 TK 344
            K
Sbjct: 400 MK 401


>gi|242092008|ref|XP_002436494.1| hypothetical protein SORBIDRAFT_10g003690 [Sorghum bicolor]
 gi|241914717|gb|EER87861.1| hypothetical protein SORBIDRAFT_10g003690 [Sorghum bicolor]
          Length = 324

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 184/244 (75%), Positives = 218/244 (89%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SSL  AE+AKF++IA+TWWD+ GP+KPLH +NPTRL+FIRSTLCRHFR+DP S++P EGL
Sbjct: 68  SSLNPAEVAKFASIAETWWDSSGPFKPLHVMNPTRLSFIRSTLCRHFRRDPNSSKPLEGL 127

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSEPLARMGATVTGIDAV+KNIKIA +HA  DP T++IEYCC TAE+LV
Sbjct: 128 KVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIASIHAASDPTTASIEYCCATAEELV 187

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E+R FDAVI+ EVIEHVA+P EFC+SLSALT   GATV+STINRSMRAYATAI+AAE+I
Sbjct: 188 KEKRLFDAVISLEVIEHVANPLEFCESLSALTAPNGATVVSTINRSMRAYATAIVAAEYI 247

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTH+WS  +TPEELVL+LQRAS+ V+EMAGFVYNPL+G WSLSDDI VN+IAFG
Sbjct: 248 LRWLPRGTHEWSKLVTPEELVLMLQRASVSVEEMAGFVYNPLSGEWSLSDDIGVNYIAFG 307

Query: 343 TKNS 346
            K S
Sbjct: 308 VKKS 311


>gi|226495789|ref|NP_001140251.1| uncharacterized protein LOC100272292 [Zea mays]
 gi|194698696|gb|ACF83432.1| unknown [Zea mays]
          Length = 326

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 181/240 (75%), Positives = 215/240 (89%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNI 164
           L  AE+AKF++IA+TWWD+ GP+KPLH +NPTRL+FIRSTLCRHFR+DP S++P EGL +
Sbjct: 72  LNPAEVAKFASIAETWWDSSGPFKPLHVMNPTRLSFIRSTLCRHFRRDPNSSKPLEGLKV 131

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
           +DVGCGGGILSEPLARMGATVT IDAV+KNIKIA +HA  DP T++IEYCC TAE LV+E
Sbjct: 132 IDVGCGGGILSEPLARMGATVTAIDAVDKNIKIASIHAASDPTTASIEYCCATAEGLVKE 191

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
           +R FDAVI+ EVIEHVA+P EFC+SLSALT+  GATVISTINRSMRAYATAI+AAE+IL 
Sbjct: 192 KRLFDAVISLEVIEHVANPLEFCESLSALTIPNGATVISTINRSMRAYATAIVAAEYILR 251

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           WLP+GTH+WS  +TPEELVL+LQ+AS+ V+EMAGFVYNPL+G WSLSDDISVN+IAFG K
Sbjct: 252 WLPRGTHEWSKLVTPEELVLMLQKASVSVEEMAGFVYNPLSGEWSLSDDISVNYIAFGVK 311


>gi|413953168|gb|AFW85817.1| hypothetical protein ZEAMMB73_771072 [Zea mays]
          Length = 319

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/237 (71%), Positives = 203/237 (85%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNI 164
           L  AE+AKF++IA+TWWD+ GP+KPLH +NPTRL+FIRSTLCRHFR+DP S++P EGL +
Sbjct: 72  LNPAEVAKFASIAETWWDSSGPFKPLHVMNPTRLSFIRSTLCRHFRRDPNSSKPLEGLKV 131

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
           +DVGCGGGILSEPLARMGAT T IDAV+KNIKIA +HA  DP T++IEYCC TAE LV+E
Sbjct: 132 IDVGCGGGILSEPLARMGATGTAIDAVDKNIKIASIHAASDPTTASIEYCCATAEGLVKE 191

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
           +R FDAVI+ EVIEHVA+P EFC+SLSALT+  GATVISTINRSMRAYATAI+AAE+IL 
Sbjct: 192 KRLFDAVISLEVIEHVANPLEFCESLSALTIPNGATVISTINRSMRAYATAIVAAEYILR 251

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           WLP+GTH+WS  +TPEELVL+LQ+AS+ V+EMAGFVY PL+G WSLS+        F
Sbjct: 252 WLPRGTHEWSKLVTPEELVLMLQKASVSVEEMAGFVYXPLSGEWSLSERYQCELHCF 308


>gi|55296632|dbj|BAD69334.1| putative dihydroxypolyprenylbenzoate methyltransferase [Oryza
           sativa Japonica Group]
 gi|55297285|dbj|BAD69070.1| putative dihydroxypolyprenylbenzoate methyltransferase [Oryza
           sativa Japonica Group]
          Length = 221

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 165/212 (77%), Positives = 193/212 (91%)

Query: 133 LNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVE 192
           +NPTRL+FIRSTLCRHFR+DP S++P EGL ++DVGCGGGILSEPLARMGATVTGIDAV+
Sbjct: 1   MNPTRLSFIRSTLCRHFRRDPNSSKPLEGLKVIDVGCGGGILSEPLARMGATVTGIDAVD 60

Query: 193 KNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSA 252
           KNIKIAR+HA  DP T++IEY CTTAE LV+E ++FDAVI+ EVIEHVA+P+ FC+SLSA
Sbjct: 61  KNIKIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVISLEVIEHVANPSGFCESLSA 120

Query: 253 LTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASID 312
           LTV  GATVISTINRSMRAYATAI+AAE+IL+WLPKGTHQWS  +TPEELVLIL+RASI 
Sbjct: 121 LTVPNGATVISTINRSMRAYATAIVAAEYILNWLPKGTHQWSKLVTPEELVLILERASIS 180

Query: 313 VKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           V+EMAGFVYNPL G WSLSDD++VN+IA+G K
Sbjct: 181 VQEMAGFVYNPLRGEWSLSDDLTVNYIAYGMK 212


>gi|148908774|gb|ABR17493.1| unknown [Picea sitchensis]
          Length = 315

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 176/262 (67%), Positives = 214/262 (81%)

Query: 85  NTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRST 144
           N A++++    N+K    SSLK AE AKF+A+ADTWWD EGP+KPLH +NPTR++FIRS 
Sbjct: 53  NAADSNASCAGNEKVPFKSSLKAAEAAKFAAMADTWWDHEGPFKPLHLMNPTRISFIRSA 112

Query: 145 LCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADL 204
           LC+HFRKDP S+RPFEGL I+DVGCGGG+L EPL+RMGA VTGIDAVEKNI IA  HA  
Sbjct: 113 LCQHFRKDPNSSRPFEGLRIIDVGCGGGLLCEPLSRMGARVTGIDAVEKNINIALQHAVR 172

Query: 205 DPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIST 264
           DP T++I+Y CTTAE+LV+E+  FDAVI+ EVIEHVADP EF KSL+ALTV  GA VIST
Sbjct: 173 DPLTASIDYQCTTAEQLVQEKEHFDAVISLEVIEHVADPQEFVKSLAALTVGSGAVVIST 232

Query: 265 INRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPL 324
           INR++R+Y  AI+AAE+IL WLP+GTH WS+ +TP ELVL+++RASI V E+AG VYNPL
Sbjct: 233 INRTIRSYFMAIVAAEYILGWLPRGTHDWSNLITPIELVLLMKRASISVHEVAGLVYNPL 292

Query: 325 TGRWSLSDDISVNFIAFGTKNS 346
              W+LSDD  VN+IAFG KNS
Sbjct: 293 RNDWTLSDDTEVNYIAFGLKNS 314


>gi|255562502|ref|XP_002522257.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Ricinus
           communis]
 gi|223538510|gb|EEF40115.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Ricinus
           communis]
          Length = 256

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/308 (62%), Positives = 210/308 (68%), Gaps = 67/308 (21%)

Query: 40  AARHLRILSGCNGALL--SVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNK 97
           A ++L+I    N  LL  ++R FS      +PI      SA   P     +N+++   + 
Sbjct: 12  AIQNLQIGPNPNQRLLNATIRHFS-----HQPI------SAPPPPY----DNNNRKTADN 56

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           KH   SSLK  ELAKFSAIADTWWD+EGP+KPLHA+NPTRLAFIRSTLCRHFRK+  SAR
Sbjct: 57  KHQKVSSLKDIELAKFSAIADTWWDSEGPFKPLHAMNPTRLAFIRSTLCRHFRKNQSSAR 116

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           PF+GL I+DVGCGGGILSEPLARMGATVTG+DAVEKNIKIA LHADLDP TSTIEYCCTT
Sbjct: 117 PFDGLKIIDVGCGGGILSEPLARMGATVTGVDAVEKNIKIACLHADLDPLTSTIEYCCTT 176

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AEKLVEEQRKFDAVIA E                                          
Sbjct: 177 AEKLVEEQRKFDAVIALE------------------------------------------ 194

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
                   LPKGTHQWSSFLTPEELVLIL+R SIDVKEMAGFVYNPLT RWSLSDDISVN
Sbjct: 195 --------LPKGTHQWSSFLTPEELVLILKRGSIDVKEMAGFVYNPLTARWSLSDDISVN 246

Query: 338 FIAFGTKN 345
           FI FGTKN
Sbjct: 247 FIIFGTKN 254


>gi|168004451|ref|XP_001754925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694029|gb|EDQ80379.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 266

 Score =  333 bits (854), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 155/263 (58%), Positives = 201/263 (76%), Gaps = 2/263 (0%)

Query: 81  SPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAF 140
           SPS N+     Q ++  + +  +S+   E AKF+AIA TWWD +GPYKPLH +NPTR+++
Sbjct: 2   SPSSNSVTGERQAHSTHE-ARKNSVDTRETAKFAAIASTWWDPKGPYKPLHIMNPTRVSY 60

Query: 141 IRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARL 200
           +RS +C+HF KD  + RP EGL I+DVGCGGG++ EPLARMG  VTG+DAV+KNI +A +
Sbjct: 61  VRSQICKHFGKDANTPRPLEGLKILDVGCGGGLVCEPLARMGGEVTGVDAVDKNIGVASV 120

Query: 201 HADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGAT 260
           HA  DP T++I+Y CTTAE LV+EQ+KFD V+A EVIEHVADP +FCKSL+AL   +G  
Sbjct: 121 HAARDPATASIKYVCTTAEHLVQEQQKFDVVLALEVIEHVADPEDFCKSLAALAKKDGLV 180

Query: 261 VISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFV 320
            IST+NRS+ ++  AII AE+IL WLPKGTH+WS F+TPEEL  I+ RASI VK+ +G V
Sbjct: 181 FISTLNRSIPSFGLAIIGAEYILGWLPKGTHEWSKFVTPEELSTIMNRASITVKDTSGMV 240

Query: 321 YNPLTGRWSLS-DDISVNFIAFG 342
           YNPLT RWS+S  + SVN+IA G
Sbjct: 241 YNPLTERWSISASNTSVNYIACG 263


>gi|302774172|ref|XP_002970503.1| hypothetical protein SELMODRAFT_147057 [Selaginella moellendorffii]
 gi|300162019|gb|EFJ28633.1| hypothetical protein SELMODRAFT_147057 [Selaginella moellendorffii]
          Length = 215

 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 134/212 (63%), Positives = 170/212 (80%)

Query: 133 LNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVE 192
           +NP RL F+RS +CRHF+KDP S RP +GL I+DVGCGGG+L EPLARMGA VTGIDAVE
Sbjct: 1   MNPVRLLFLRSGMCRHFKKDPISPRPLDGLTILDVGCGGGLLCEPLARMGAHVTGIDAVE 60

Query: 193 KNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSA 252
           +NI++A+LHA  DP T+TI Y  TTAE+LV+E+++FD V A EVIEHVADP +F +SLS 
Sbjct: 61  ENIEVAKLHAAKDPLTATIVYQHTTAEQLVQEKQQFDIVAALEVIEHVADPMDFLQSLSL 120

Query: 253 LTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASID 312
           LT  +GA VIST+NRS  +Y+ AI AAE+IL WLPKGTH WS FLTPEE+ L+++RAS+ 
Sbjct: 121 LTKQDGAVVISTLNRSPTSYSLAIFAAEYILGWLPKGTHDWSKFLTPEEVALLMERASLT 180

Query: 313 VKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           ++EM G  Y+PL   W L+DD+SVN+IA+  K
Sbjct: 181 LEEMTGMFYDPLKQTWRLADDLSVNYIAWAAK 212


>gi|302793634|ref|XP_002978582.1| hypothetical protein SELMODRAFT_233156 [Selaginella moellendorffii]
 gi|300153931|gb|EFJ20568.1| hypothetical protein SELMODRAFT_233156 [Selaginella moellendorffii]
          Length = 215

 Score =  290 bits (742), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 133/212 (62%), Positives = 169/212 (79%)

Query: 133 LNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVE 192
           +NP RL F+RS +CRHF+KDP S RP +GL I+DVGCGGG+L EPLARMGA VTGIDAVE
Sbjct: 1   MNPVRLLFLRSGMCRHFKKDPISPRPLDGLTILDVGCGGGLLCEPLARMGAHVTGIDAVE 60

Query: 193 KNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSA 252
           +NI++A+LHA  DP T+TI Y  TTAE+LV+E+++FD V A EVIEHV DP +F +SLS 
Sbjct: 61  ENIEVAKLHAAKDPLTATILYQHTTAEQLVQEKQQFDIVAALEVIEHVPDPMDFLQSLSL 120

Query: 253 LTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASID 312
           LT  +GA VIST+NRS  +Y+ AI AAE+IL WLPKGTH WS FLTPEE+ L+++RAS+ 
Sbjct: 121 LTKQDGAVVISTLNRSPTSYSLAIFAAEYILGWLPKGTHDWSKFLTPEEVALLMERASLT 180

Query: 313 VKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           ++EM G  Y+PL   W L+DD+SVN+IA+  K
Sbjct: 181 LEEMTGMFYDPLKQTWRLADDLSVNYIAWAAK 212


>gi|147845700|emb|CAN84175.1| hypothetical protein VITISV_030437 [Vitis vinifera]
          Length = 166

 Score =  268 bits (686), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/141 (88%), Positives = 137/141 (97%)

Query: 206 PETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTI 265
           PET+ IEYCCTTAEKLVEEQR+FDAVI+ EVIEHVADPAEFCKSL+ALTVS GATV+STI
Sbjct: 25  PETANIEYCCTTAEKLVEEQREFDAVISLEVIEHVADPAEFCKSLAALTVSNGATVVSTI 84

Query: 266 NRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLT 325
           NRSMR+YATAI+AAE+ILHWLPKGTHQWS+FLTPEELVLILQRASI V+EMAGFVYNPLT
Sbjct: 85  NRSMRSYATAIVAAEYILHWLPKGTHQWSNFLTPEELVLILQRASITVQEMAGFVYNPLT 144

Query: 326 GRWSLSDDISVNFIAFGTKNS 346
           G+W+LSDDISVNFIAFGTKNS
Sbjct: 145 GQWTLSDDISVNFIAFGTKNS 165


>gi|413949103|gb|AFW81752.1| hypothetical protein ZEAMMB73_155905 [Zea mays]
          Length = 179

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 123/164 (75%), Positives = 144/164 (87%)

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
           MGATVT ID V+KNIKIA +HA  DP T++IEYCC TAE LV+E+R FDAVI+ EVIEHV
Sbjct: 1   MGATVTAIDVVDKNIKIASIHAASDPTTASIEYCCATAEGLVKEKRLFDAVISLEVIEHV 60

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
           A+P EFC+SLSALT+  GATVISTINRSMRAYATAI+A E+IL WLP+GTH+WS  +TPE
Sbjct: 61  ANPLEFCESLSALTIPNGATVISTINRSMRAYATAIVATEYILRWLPRGTHEWSKLVTPE 120

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           ELVL+LQ+AS+ V+EMAGFVYNPL+G WSLSDDISVN+IAFG K
Sbjct: 121 ELVLMLQKASVSVEEMAGFVYNPLSGEWSLSDDISVNYIAFGVK 164


>gi|384246735|gb|EIE20224.1| ubiquinone biosynthesis O-methyltransferase [Coccomyxa
           subellipsoidea C-169]
          Length = 256

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 126/245 (51%), Positives = 167/245 (68%), Gaps = 1/245 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+  AE+ KF  +A  WWD EG   PLH++NP R  F R  LC  F +D  SA P +GL
Sbjct: 3   SSISAAEVRKFEEMAKNWWDPEGSSGPLHSMNPVRTKFTRDALCLCFGRDTMSAHPLQGL 62

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
           +I+DVGCGGG+ SE LAR+GA+VTGIDA E  I +AR HA  DP       Y   TAE+ 
Sbjct: 63  SILDVGCGGGLFSEALARLGASVTGIDASEGAIFVAREHARADPVIQGRTAYRNITAEQA 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           V++  +FDAV+ASEVIEHV +  EFC+SL+ALT   GA VISTINR+  +YA AI+ AE+
Sbjct: 123 VDKGLQFDAVVASEVIEHVENVPEFCRSLAALTRDSGAVVISTINRTAASYAVAIVGAEY 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +   +PKGTH WS F+TP+EL  ++ R  +    ++G   NP+TGRWSL +D +VN+I++
Sbjct: 183 LAQVVPKGTHDWSRFITPDELARLMGRVGLQQVSISGMFLNPVTGRWSLMNDTAVNYISY 242

Query: 342 GTKNS 346
             KN+
Sbjct: 243 FRKNN 247


>gi|119385316|ref|YP_916372.1| 3-demethylubiquinone-9 3-methyltransferase [Paracoccus
           denitrificans PD1222]
 gi|119375083|gb|ABL70676.1| 3-demethylubiquinone-9 3-methyltransferase [Paracoccus
           denitrificans PD1222]
          Length = 262

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 120/240 (50%), Positives = 168/240 (70%), Gaps = 3/240 (1%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           APSS+  AE+AKF A+A  WWD +G +KPLH LNPTRL ++ + +   F +D  +A PF+
Sbjct: 16  APSSIDPAEVAKFQAMAREWWDPQGKFKPLHMLNPTRLDYVTTQIAAQFGRDLAAAGPFQ 75

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL ++D+GCGGG+++EP+AR+GATVTG DA E NI IARLHA  + +   I+Y  TTAE 
Sbjct: 76  GLTLLDIGCGGGLMAEPMARLGATVTGADAAEGNIAIARLHA--EEQGLAIDYRATTAEA 133

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L  +  +FD V+A E++EHVADPA+F  +   L    G  ++ST+NR+ R++A AI+ AE
Sbjct: 134 LAADGHRFDVVMALEIVEHVADPAQFIATCRELVAPGGMLIVSTLNRTARSFAAAIVGAE 193

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
            I+ WLPKGTH W  F+TP+EL  + + A + V +  G V+NPL   WSLS  D+SVN++
Sbjct: 194 WIMRWLPKGTHDWRRFITPDELAQMTEAAGLRVVDRCGMVFNPLGWNWSLSHRDLSVNYV 253


>gi|125596078|gb|EAZ35858.1| hypothetical protein OsJ_20157 [Oryza sativa Japonica Group]
          Length = 306

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 136/266 (51%), Positives = 172/266 (64%), Gaps = 54/266 (20%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SA SSL  AE+A F++ A+TWWD EGP+K L  +NPTR++FIRS LC+HFR+DP S++P 
Sbjct: 61  SAASSLNPAEVAHFASFAETWWDTEGPFKHLLVMNPTRVSFIRSILCKHFRRDPNSSKPL 120

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL I+DVGC  G+LSEPLARMGATVTGIDA +++IKIAR+HA                 
Sbjct: 121 EGLKIIDVGCAAGMLSEPLARMGATVTGIDAADESIKIARVHA----------------- 163

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI--- 276
                           VIEHV +P+EFC SLSALTV  GA VISTINRS+RA+AT I   
Sbjct: 164 ----------------VIEHVDNPSEFCGSLSALTVPNGAFVISTINRSIRAFATMIFST 207

Query: 277 -IAAEHILH-------W----------LPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
            I    I++       W          +PKGTH WS  +TP+ELV +L++ASI V+EMAG
Sbjct: 208 GIQVSRIVNAILFHNMWSSRKHRQEITIPKGTHHWSKLVTPDELVQMLEKASIYVQEMAG 267

Query: 319 FVYNPLTGRWSLSDDISVNFIAFGTK 344
             YNP  G +S+S D SV++ A+G K
Sbjct: 268 IGYNPWRGDFSMSKDTSVDYFAYGIK 293


>gi|392378179|ref|YP_004985338.1| 3-demethylubiquinone-9 3-O-methyltransferase [Azospirillum
           brasilense Sp245]
 gi|356879660|emb|CCD00584.1| 3-demethylubiquinone-9 3-O-methyltransferase [Azospirillum
           brasilense Sp245]
          Length = 253

 Score =  257 bits (656), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 120/238 (50%), Positives = 166/238 (69%), Gaps = 5/238 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ++A+FSAIA  WWD  G ++PLH LNP RLA+IR TLCR F +DP +A P +GL IVD+G
Sbjct: 18  DIARFSAIAAEWWDPTGKFRPLHRLNPLRLAYIRDTLCRRFGRDPLAAEPLKGLRIVDIG 77

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
           CGGG+LSEP+ARMGATV G+DA E+N++ A  HA    ET T ++Y  TTAE L     +
Sbjct: 78  CGGGLLSEPVARMGATVVGVDAAERNVRTAAAHA---AETGTPVDYRATTAEALAASGER 134

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV+A EVIEHVAD   F KS +ALT   GA  ++T+NR+ +++A AI+ AE+IL WLP
Sbjct: 135 FDAVLAMEVIEHVADVPLFVKSCAALTAPGGALFLATLNRTPKSFALAIVGAEYILRWLP 194

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTK 344
           +GTH W  FL P EL   ++   + ++++ G  YNPL+  + L+  D+ VN++ +  +
Sbjct: 195 RGTHNWRQFLRPGELAAAVRAEGMAIRDLTGITYNPLSDEFRLNPRDLDVNYMGWAER 252


>gi|307110178|gb|EFN58414.1| hypothetical protein CHLNCDRAFT_12117, partial [Chlorella
           variabilis]
          Length = 252

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/244 (49%), Positives = 161/244 (65%), Gaps = 8/244 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E AKF+A+A  WWD  GP+ PLHA+NP R  F+RS LC  F +D    RP  GL ++D+G
Sbjct: 6   EAAKFAALAGEWWDPAGPFAPLHAMNPVRCRFLRSALCVAFGRDTAQPRPLAGLRLLDIG 65

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE-TSTIEYCCTTAEKLVEEQRK 227
           CGGG+L+E LARMGA VTGID  E  I  A+ HA LDP+    + Y   +AE+LV     
Sbjct: 66  CGGGLLAESLARMGAHVTGIDVNEGGIATAQAHAALDPDLAGCLHYRTASAEQLVAAGEC 125

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV+ASEVIEHVA    FC +L+ALT   G   +ST+NR+ R+Y  A++ AEH+L W+P
Sbjct: 126 FDAVVASEVIEHVASVPAFCAALAALTRPGGGVALSTLNRTPRSYLAAVLVAEHVLRWVP 185

Query: 288 KGTHQWSSFLTPEELVLILQR-------ASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            GTH+W  F+TP+EL + ++        A + ++ +AG  Y+PL+GRW L  D +VN+IA
Sbjct: 186 PGTHEWERFVTPQELAMQMEESGGGGGGAPLRLRLLAGMEYDPLSGRWDLGRDTAVNYIA 245

Query: 341 FGTK 344
           F  K
Sbjct: 246 FFDK 249


>gi|407783428|ref|ZP_11130629.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Oceanibaculum
           indicum P24]
 gi|407202153|gb|EKE72148.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Oceanibaculum
           indicum P24]
          Length = 243

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 121/242 (50%), Positives = 162/242 (66%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+A+F+AIAD WWD EG ++PLH LNP RL +IR  LC HF +DP + +P  GL
Sbjct: 3   STVDAREIAQFAAIADAWWDEEGAFRPLHRLNPVRLRYIRDRLCAHFGRDPEAPKPLNGL 62

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            +VDVGCGGG+L EP+ RMGATVTGIDA E+ I  A+ HA        I+Y   TAE LV
Sbjct: 63  RLVDVGCGGGLLWEPMTRMGATVTGIDAAEEGIAAAKAHA--ASVGLKIDYRAATAESLV 120

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
                FDAVI+ EV+EHVAD   F  +   LT   GA  +ST+NR+ ++Y TAI+ AE++
Sbjct: 121 AAGESFDAVISMEVLEHVADVDAFLAACRDLTRPGGALALSTLNRTPKSYLTAIVGAEYV 180

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTH W  F+ P EL   L+R  +D+ ++ G  Y+PL  R+SL  D+ VN++AF 
Sbjct: 181 LRWLPRGTHNWKKFIRPSELAAALRRQGLDLADLTGIEYSPLADRFSLGRDLGVNYLAFA 240

Query: 343 TK 344
           T+
Sbjct: 241 TR 242


>gi|389695989|ref|ZP_10183631.1| ubiquinone biosynthesis O-methyltransferase [Microvirga sp.
           WSM3557]
 gi|388584795|gb|EIM25090.1| ubiquinone biosynthesis O-methyltransferase [Microvirga sp.
           WSM3557]
          Length = 242

 Score =  251 bits (641), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 116/242 (47%), Positives = 161/242 (66%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+A+F  IA+TWWD +GP K LH  NP RLA+IR   CR F +DP SAR  +G+
Sbjct: 2   TTIDPAEVARFEKIAETWWDPKGPMKVLHKFNPVRLAYIRDEACRRFGRDPRSARSLDGI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+LSEPLAR+GA VTG+D    NI +ARLHA+       ++Y   T E++V
Sbjct: 62  TILDVGCGGGVLSEPLARLGARVTGLDPAPTNISVARLHAER--AGLPVDYRNETVEEVV 119

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
                FD V+A EV+EHVAD   F  + +      G  V++TINR++R++A+AI+ AE+I
Sbjct: 120 ARGETFDMVLAMEVVEHVADRQAFVNACAQGVKPGGCLVMATINRTLRSFASAIVGAEYI 179

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH+W  F+TP+EL   ++ A   V ++ G  YNPL   WSLS D +VN++   
Sbjct: 180 LGWLPKGTHEWDKFVTPDELTDAIRAAGFAVNDLMGVAYNPLRDSWSLSHDTAVNYMLLA 239

Query: 343 TK 344
            +
Sbjct: 240 AR 241


>gi|83592081|ref|YP_425833.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum rubrum
           ATCC 11170]
 gi|386348780|ref|YP_006047028.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodospirillum
           rubrum F11]
 gi|109895915|sp|Q2RWE9.1|UBIG_RHORT RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|83574995|gb|ABC21546.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum rubrum
           ATCC 11170]
 gi|346717216|gb|AEO47231.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodospirillum
           rubrum F11]
          Length = 249

 Score =  250 bits (639), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 114/237 (48%), Positives = 156/237 (65%), Gaps = 2/237 (0%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFSA+AD WWD EG +KPLH  NP R+AF+R     HF +D  + RPFEGL+++D+
Sbjct: 12  AELAKFSAMADAWWDPEGDFKPLHKFNPVRIAFLRDHFAAHFGRDIEAPRPFEGLSLLDI 71

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+L EP AR+G  VTGIDA E+NI  A +HA+       + Y C   E LV E + 
Sbjct: 72  GCGGGLLCEPFARLGFAVTGIDAAERNIGTASVHAER--AGLPLTYRCAMPEDLVAEGKT 129

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV+  EV+EHVAD   F  S+  L    GA   +T+NR++++ A A + AE++L WLP
Sbjct: 130 FDAVLTMEVVEHVADVRLFLDSVGQLCRPGGAVGAATLNRTLKSLALAKVGAEYVLRWLP 189

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTH W  F+ P EL   L+ A + V  +AG  ++P +G WS + D+SVN++ F T+
Sbjct: 190 RGTHDWRKFMKPSELTAGLREAGLSVDAIAGMTFDPFSGTWSQTTDVSVNYMLFATR 246


>gi|395792052|ref|ZP_10471491.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. arupensis Pm136co]
 gi|395432971|gb|EJF98945.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. arupensis Pm136co]
          Length = 247

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 161/246 (65%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H   +++   E+  FS IA  WWD +G ++PLH  NPTRLA+IR  +C  F +DP S  P
Sbjct: 3   HETYTTIDQDEIDHFSHIASEWWDPQGKFRPLHQFNPTRLAYIREKICLEFNRDPISLMP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FE L I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA  +    +I+Y  TTA
Sbjct: 63  FENLKILDIGCGGGLLCEPMARLGATVVGADAAQTNIEVAKIHAAQN--GLSIDYRTTTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L  E+ +FD ++  EV+EHVAD   F  + + L   +G   +ST+NR+ +A+  AI+ 
Sbjct: 121 EALANEEEQFDIILNMEVVEHVADVNLFMAATAELLKPQGLMFVSTLNRTWKAWGLAIVG 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLPKGTH +  FL P+EL  +L ++++ V +  G  YNPLT  W+ S D+ VN+
Sbjct: 181 AEYILRWLPKGTHDYKKFLKPQELKNLLSKSTLTVIDQVGITYNPLTDSWNRSKDMDVNY 240

Query: 339 IAFGTK 344
           +    K
Sbjct: 241 MLLAKK 246


>gi|384260628|ref|YP_005415814.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum
           photometricum DSM 122]
 gi|378401728|emb|CCG06844.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum
           photometricum DSM 122]
          Length = 562

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 116/237 (48%), Positives = 155/237 (65%), Gaps = 2/237 (0%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFSA+AD WWD EG +KPLH  NP R+AFIR  + +HF +     RPFEGL ++DV
Sbjct: 327 AELAKFSAMADAWWDPEGKFKPLHKFNPVRIAFIRDHMAQHFGRSLDVERPFEGLRLLDV 386

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+L EPLAR+G  V GIDA E+N+  A  HA        + Y   T E L  E   
Sbjct: 387 GCGGGLLCEPLARLGFEVVGIDAAERNVGTASNHAQR--SGVPVTYRVATPEDLAAEGAT 444

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV+  EV+EHVAD   F +S+ AL    GA V +T+NR+++A A A   AE++L WLP
Sbjct: 445 FDAVLIMEVVEHVADLDLFFQSVGALLRPGGALVGATLNRTVKALALAKFGAEYVLRWLP 504

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTH W  FL P E    L+RA ++ +++AG  +NPL+G WS + D+S+N++ F  +
Sbjct: 505 RGTHDWRKFLKPSEFSDGLRRAGVETRDLAGMTFNPLSGEWSKTTDVSMNYLLFAVR 561


>gi|114769742|ref|ZP_01447352.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacterales
           bacterium HTCC2255]
 gi|114549447|gb|EAU52329.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           HTCC2255]
          Length = 246

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/232 (49%), Positives = 159/232 (68%), Gaps = 3/232 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD +G +KPLH LNPTRL +I   +   F +D  + RPFEGL I+D+G
Sbjct: 11  EVAKFEAMAAEWWDTDGKFKPLHMLNPTRLDYIVEQISAEFGRDLTTNRPFEGLKILDIG 70

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSEP+AR+GATV G DA EKNI +A++HA        I+Y  T+AE++++   KF
Sbjct: 71  CGGGLLSEPMARLGATVVGADAAEKNIPVAQIHA--QQSGLEIDYRHTSAEEILKNSEKF 128

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV+DP  F  +   L    G  + STINR+ ++Y  AII AEHI+ WLPK
Sbjct: 129 DVVLNMEVVEHVSDPLAFLTACRQLLKLNGLMLCSTINRNPKSYLMAIIGAEHIMRWLPK 188

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           GTH W+ F+TP+EL  +++   +   +  GFV+NPL   WS+SD D+SVN++
Sbjct: 189 GTHDWNKFITPDELFDLIKNVGLTPVDQKGFVFNPLKWSWSISDKDLSVNYV 240


>gi|254459793|ref|ZP_05073209.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacterales
           bacterium HTCC2083]
 gi|206676382|gb|EDZ40869.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 252

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 115/247 (46%), Positives = 168/247 (68%), Gaps = 3/247 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +AP+++  +E+AKF A+A  WWD +G +KPLH LNP RL ++   +   F +D  +  P
Sbjct: 6   QAAPNTVDPSEVAKFEAMAAEWWDPKGKFKPLHLLNPCRLDYLTRQIAGEFDRDLGAPEP 65

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F+GL I+D+GCGGG+LSEP+AR+GATV G DA E NI +A++HA+      TI+Y CTTA
Sbjct: 66  FKGLRILDIGCGGGLLSEPMARLGATVVGADAAESNIPVAQVHAE--QSGLTIDYRCTTA 123

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L +   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AII 
Sbjct: 124 EALADAGEQFDVVVNMEVVEHVADPLAYLTACQQLLKPGGLHLCSTINRNPKSYAMAIIG 183

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE I+ WLPKGTH+W+ F+TP+EL  +L ++ ++  +  GFV+NP+   WS+S+ D+SVN
Sbjct: 184 AEVIMRWLPKGTHEWNKFITPDELFELLSQSGVEPVDRKGFVFNPILWSWSISERDLSVN 243

Query: 338 FIAFGTK 344
           ++    K
Sbjct: 244 YVTASIK 250


>gi|374328361|ref|YP_005078545.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudovibrio sp.
           FO-BEG1]
 gi|359341149|gb|AEV34523.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudovibrio sp.
           FO-BEG1]
          Length = 258

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 120/254 (47%), Positives = 163/254 (64%), Gaps = 8/254 (3%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           +N  K+ A +++  AE+A FS+IA  WWD  G ++PLH  +P R+++I+   C HF +D 
Sbjct: 8   SNAAKNPAQTTIDPAEVAHFSSIASEWWDPTGKFRPLHKFSPVRISYIKEYACDHFGRDE 67

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETST 210
            S +  EGL I+D+GCGGG+LSEP+ARMGATV G DA E NIK+A LHA    LD     
Sbjct: 68  TSPKALEGLRILDIGCGGGLLSEPMARMGATVVGADASETNIKVATLHAQQSGLD----- 122

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           I+Y   TAE LVE   +FD V+  EV+EHVAD   F KS + L    G   ++TINR+++
Sbjct: 123 IDYRAQTAESLVEAGEQFDIVLNMEVVEHVADVPLFMKSCADLVRPGGMMFVATINRTLK 182

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           AYA AI+AAE +L WLPKGTHQ+   + PEEL   L  + + + E  G  +NPLT  WS 
Sbjct: 183 AYALAIVAAERVLRWLPKGTHQYEKLVRPEELEAPLNESGMSIYERCGVSFNPLTDSWSR 242

Query: 331 SDDISVNFIAFGTK 344
           + D+ VN++    K
Sbjct: 243 TTDLDVNYMVIARK 256


>gi|298292691|ref|YP_003694630.1| ubiquinone biosynthesis O-methyltransferase [Starkeya novella DSM
           506]
 gi|296929202|gb|ADH90011.1| ubiquinone biosynthesis O-methyltransferase [Starkeya novella DSM
           506]
          Length = 247

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/239 (48%), Positives = 160/239 (66%), Gaps = 4/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ +F+A+A  WW+  G  K LH  NP RLA++R  +  HF  DP + RP EGL+++D+G
Sbjct: 12  EVERFAALAAEWWNPRGKMKVLHKFNPVRLAYLRERIVAHFGLDPKAIRPLEGLSLLDIG 71

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
           CGGG+LSEPLARMGA+VTGID  E+N++IA LHA+   E+S  + Y  TTAE L  E  +
Sbjct: 72  CGGGLLSEPLARMGASVTGIDPAERNVRIASLHAE---ESSIPVTYRATTAEALANEGAR 128

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+A EV+EHVAD   F    S +    G  V +T+NR+ R++A AI+ AE++L WLP
Sbjct: 129 FDVVMAMEVVEHVADVGLFLARASEMVKPGGLLVAATLNRTKRSFALAIVGAEYVLGWLP 188

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           +GTH W+ F+TP+EL L L+   + V +  G V+NPLT  W  S D+SVN++    K +
Sbjct: 189 RGTHDWNRFITPDELQLALEAGGLKVTDREGVVFNPLTDEWRRSSDLSVNYMMVAEKGA 247


>gi|423714100|ref|ZP_17688359.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. arupensis OK-94-513]
 gi|395421247|gb|EJF87503.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. arupensis OK-94-513]
          Length = 247

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 110/246 (44%), Positives = 161/246 (65%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H   +++   E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F +DP S  P
Sbjct: 3   HETHTTIDQDEIDHFSHIASEWWNPQGKFRPLHQFNPTRLAYIREKICLEFNRDPISLMP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FE L I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA  +    +I+Y  TTA
Sbjct: 63  FENLKILDIGCGGGLLCEPMARLGATVVGADAAQTNIEVAKIHAAQN--GLSIDYRTTTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L  E+ +FD ++  EV+EHVAD   F  + + L   +G   +ST+NR+ +A+  AI+ 
Sbjct: 121 EALANEEEQFDIILNMEVVEHVADVNLFMAATAELLKPQGLMFVSTLNRTWKAWGLAIVG 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLPKGTH +  FL P+EL  +L ++++ V +  G  YNPLT  W+ S D+ VN+
Sbjct: 181 AEYILRWLPKGTHDYKKFLKPQELKNLLSKSTLTVIDQVGITYNPLTDSWNRSKDMDVNY 240

Query: 339 IAFGTK 344
           +    K
Sbjct: 241 MLLAKK 246


>gi|288956954|ref|YP_003447295.1| 3-demethylubiquinone-9 3-methyltransferase [Azospirillum sp. B510]
 gi|288909262|dbj|BAI70751.1| 3-demethylubiquinone-9 3-methyltransferase [Azospirillum sp. B510]
          Length = 260

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 165/248 (66%), Gaps = 5/248 (2%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SA  ++   ++A+FSAIA  WWD  G +KPLH LNP RL +IR ++C+   +DP +  P 
Sbjct: 16  SAGGTVDPEDVARFSAIAAEWWDPAGKFKPLHRLNPLRLTYIRDSVCKRLGRDPLAPAPL 75

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTA 218
            GL +VD+GCGGG+L+EPLARMGA V G+DA EKNIK A  HA    ET +T++Y  TTA
Sbjct: 76  AGLRVVDIGCGGGLLAEPLARMGAEVVGVDASEKNIKTAATHA---AETGTTVDYRATTA 132

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L      FD V+A EVIEHVAD A F KSLS L    GA  ++T+NR+ +++A AI+ 
Sbjct: 133 EALAASGETFDVVLAMEVIEHVADVALFVKSLSDLLAPGGALFLATLNRTPKSFALAIVG 192

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE+IL WLP+GTH W  FL P EL  I++   + ++++ G  YNPL+  + L+  D+ VN
Sbjct: 193 AEYILRWLPRGTHNWRQFLRPSELNAIIRPHGLGMRDLTGITYNPLSDEFRLNPRDLDVN 252

Query: 338 FIAFGTKN 345
           ++ +  + 
Sbjct: 253 YMGWAERG 260


>gi|149912922|ref|ZP_01901456.1| ubiquinone biosynthesis O-methyltransferase [Roseobacter sp.
           AzwK-3b]
 gi|149813328|gb|EDM73154.1| ubiquinone biosynthesis O-methyltransferase [Roseobacter sp.
           AzwK-3b]
          Length = 248

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 116/247 (46%), Positives = 167/247 (67%), Gaps = 3/247 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A S++  AE+AKF A+A  WWD  G +KPLH LNP RL +I S +   F +D  + +P
Sbjct: 2   QAARSTIDPAEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITSQIATEFDRDLGTDKP 61

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F GL I+D+GCGGG+LSEP+AR+GA + G DA E+NI +A++HA+      TI+Y  T+A
Sbjct: 62  FSGLRILDIGCGGGLLSEPMARLGADMVGADAAERNIPVAQVHAE--QSGLTIDYRHTSA 119

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L     +FDAV+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ 
Sbjct: 120 EALAAAGEQFDAVLNMEVVEHVADPLSYLSACQQLLKPGGLHICSTINRNAKSFAMAIVG 179

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE+++ WLPKGTH+W  F+TP+EL  +L++A +   +  GFV+NP+T  WSLS  D+SVN
Sbjct: 180 AEYVMRWLPKGTHEWKKFITPDELYALLKQAGLTPVDRKGFVFNPITWSWSLSSRDLSVN 239

Query: 338 FIAFGTK 344
           ++   TK
Sbjct: 240 YVTASTK 246


>gi|99082746|ref|YP_614900.1| 3-demethylubiquinone-9 3-methyltransferase [Ruegeria sp. TM1040]
 gi|123378578|sp|Q1GCH8.1|UBIG_SILST RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|99039026|gb|ABF65638.1| 3-demethylubiquinone-9 3-methyltransferase [Ruegeria sp. TM1040]
          Length = 247

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 115/244 (47%), Positives = 165/244 (67%), Gaps = 3/244 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+AKF A+A  WWD  G +KPLH LNP RL +I S +   F +D  +  PF GL
Sbjct: 6   STVDPSEIAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITSQIAGEFDRDLKTDAPFAGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA E N+ +AR+HA+       I+Y  TTAE + 
Sbjct: 66  RILDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHAE--QSGLEIDYRHTTAEAMA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVADP  +  +   L  S G  + STINR+ ++YA AI  AE +
Sbjct: 124 EAGEQFDVVLNMEVVEHVADPLSYLTATQQLLKSGGLQICSTINRNPKSYAMAIFGAEVV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLP+GTH+WS F+TP+EL  +L++A ++  +  GFV+NP+  +WS+SD D+SVN++  
Sbjct: 184 MRWLPRGTHEWSKFITPDELFALLEQAGLNPVDRKGFVFNPILWKWSISDRDLSVNYVTA 243

Query: 342 GTKN 345
            TK+
Sbjct: 244 STKS 247


>gi|260431719|ref|ZP_05785690.1| 3-demethylubiquinone-9 3-O-methyltransferase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415547|gb|EEX08806.1| 3-demethylubiquinone-9 3-O-methyltransferase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 248

 Score =  247 bits (630), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 164/244 (67%), Gaps = 3/244 (1%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P+++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  + +PFEG
Sbjct: 5   PNTVDPSEIAKFEAMAAEWWDPHGKFKPLHMLNPCRLDYITQQIAGEFDRDLTAVKPFEG 64

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
           L ++D+GCGGG+LSEP+AR+GA V G DA E N+ +AR+HA+       I+Y  TTAE L
Sbjct: 65  LRLLDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHAE--QSGLQIDYRHTTAEAL 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AI  AE 
Sbjct: 123 ADAGEQFDVVLNMEVVEHVADPLAYLTATQQLLKPGGLEICSTINRNPKSYAMAIFGAEV 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           ++ WLP+GTH+WS F+TP+EL  +L++A +D  +  GFV+NP+T  WS+SD D+SVN++ 
Sbjct: 183 VMRWLPRGTHEWSKFITPDELFDLLRQAGLDPVDRKGFVFNPITWSWSISDRDLSVNYVT 242

Query: 341 FGTK 344
              K
Sbjct: 243 ASVK 246


>gi|339505644|ref|YP_004693064.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter litoralis
           Och 149]
 gi|338759637|gb|AEI96101.1| 3-demethylubiquinone-9 3-O-methyltransferase UbiG [Roseobacter
           litoralis Och 149]
          Length = 248

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 115/243 (47%), Positives = 165/243 (67%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D  ++ PF+GL
Sbjct: 6   TTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITAQIAGEFDRDLATSEPFKGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L+EP+AR+GA V G DA E+NI +AR+HA+      TI+Y  TTAE L 
Sbjct: 66  RILDIGCGGGLLAEPMARLGADVVGADAAERNIPVARVHAER--SGLTIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVA P ++  +   L    G  V ST+NR+ ++Y  AII AEH+
Sbjct: 124 AAGEQFDVVLNMEVVEHVASPIDYLIACRQLLKRGGLQVCSTLNRNPKSYVMAIIGAEHV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH+WS F+TP+EL  +L++A +D  +  GFV+NP+T  W LSD D+SVN++  
Sbjct: 184 MRWLPKGTHEWSKFITPDELYDLLRQAGMDPVDRKGFVFNPITWSWKLSDRDLSVNYVTA 243

Query: 342 GTK 344
             K
Sbjct: 244 SIK 246


>gi|254464701|ref|ZP_05078112.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacterales
           bacterium Y4I]
 gi|206685609|gb|EDZ46091.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacterales
           bacterium Y4I]
          Length = 248

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 117/245 (47%), Positives = 163/245 (66%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  S  PFEGL
Sbjct: 6   STVDPAEIAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITKQIAAEFNRDLTSRNPFEGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+ R+GATV G DA E N+ +AR+HA  +     I+Y  TTAE L 
Sbjct: 66  RLLDIGCGGGLLSEPMTRLGATVVGADAAEGNLPVARIHA--EQSGLEIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AII AE I
Sbjct: 124 EAGEQFDVVLNMEVVEHVADPLNYLTATQQLLKPGGLQICSTINRNPKSFAMAIIGAEVI 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLP+GTH+WS F+TP+EL  +L++A +   +  GFV+NP+T  WS+S+ D+SVN++  
Sbjct: 184 MRWLPRGTHEWSKFITPDELFELLRKAGLKPVDRKGFVFNPITWTWSISERDLSVNYVTA 243

Query: 342 GTKNS 346
             K S
Sbjct: 244 SVKPS 248


>gi|220920157|ref|YP_002495458.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           nodulans ORS 2060]
 gi|254789992|sp|B8IUB0.1|UBIG_METNO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|219944763|gb|ACL55155.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           nodulans ORS 2060]
          Length = 249

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 111/236 (47%), Positives = 154/236 (65%), Gaps = 2/236 (0%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+A+F  IA TWWD  GP + LH  NP R+ +IR T+CRHF +DP    P E L+
Sbjct: 8   SIDRDEVARFERIAATWWDEAGPMRVLHRFNPVRITYIRDTVCRHFGRDPRRPLPLEALS 67

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGGILSEPLAR+GATVTG+D    NI++A+ HA        ++Y   T E +VE
Sbjct: 68  LIDIGCGGGILSEPLARLGATVTGLDPAPTNIRVAQAHA--AEAGVPVDYRGQTIEAVVE 125

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
              +FD V+A EV+EHV D   F ++  A     G    +T+NR+MR++A AI+ AE++L
Sbjct: 126 AGERFDVVLAMEVVEHVVDMPAFVRTACAAVKPGGLFFAATLNRTMRSFALAIVGAEYVL 185

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            WLP+GTH W  F+TP EL   ++ A + V +  G VYNPL GRW++S D  VN++
Sbjct: 186 GWLPRGTHDWEKFVTPAELTGAVESAGLTVIDTTGVVYNPLGGRWAMSRDTGVNYM 241


>gi|154252194|ref|YP_001413018.1| ubiquinone biosynthesis O-methyltransferase [Parvibaculum
           lavamentivorans DS-1]
 gi|171769598|sp|A7HTX8.1|UBIG_PARL1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|154156144|gb|ABS63361.1| ubiquinone biosynthesis O-methyltransferase [Parvibaculum
           lavamentivorans DS-1]
          Length = 253

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/252 (45%), Positives = 161/252 (63%), Gaps = 2/252 (0%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + +    +A SS+   E+A+FSA+A  WWD  G ++PLH  NPTRL++IR     HF  D
Sbjct: 1   MADRADKAARSSVDPGEIARFSAMAAEWWDPAGKFRPLHKFNPTRLSYIRERTSAHFGLD 60

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
             + RPFE L  +D+GCGGG+LSEP+AR+GA +   DA E+NIK A +HA    +   I+
Sbjct: 61  ARAVRPFEDLRFLDIGCGGGLLSEPMARLGAAMVSADASEQNIKTASVHAA--EQGLGID 118

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y CTTAE L      FD ++  EVIEHVADP  F K  +++    G   I+T+NR+++A+
Sbjct: 119 YRCTTAEALAAAGETFDVILNMEVIEHVADPMAFLKDCASMLRPGGLMFIATLNRTLKAH 178

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE++L WLP+GTH W  F+T  E+   +  A + +KE+ G  YNPLT +WSLS 
Sbjct: 179 AFAIVGAEYVLGWLPRGTHDWKKFITVNEMETGIADAGLRLKELTGVSYNPLTDKWSLSR 238

Query: 333 DISVNFIAFGTK 344
           D  VN++A   +
Sbjct: 239 DTDVNYMALAER 250


>gi|254420039|ref|ZP_05033763.1| 3-demethylubiquinone-9 3-methyltransferase [Brevundimonas sp. BAL3]
 gi|196186216|gb|EDX81192.1| 3-demethylubiquinone-9 3-methyltransferase [Brevundimonas sp. BAL3]
          Length = 272

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/271 (43%), Positives = 168/271 (61%), Gaps = 3/271 (1%)

Query: 77  SASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPT 136
           S+  +PS    E H    N+ + +  +S+  A++A+FSA A  WWDA GP+ PLH  NP 
Sbjct: 4   SSDAAPSRLPREGHGFPQNSSEGAFGASIDPADVARFSAQAAEWWDAHGPFAPLHRFNPA 63

Query: 137 RLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIK 196
           RLA IR  LC    +DP + RPFEGL ++DVGCGGG+++EP+ RMG +VT IDA  +NI 
Sbjct: 64  RLALIREQLCARLGRDPKARRPFEGLTLLDVGCGGGLIAEPMRRMGFSVTAIDASSENIG 123

Query: 197 IARLHADLDPETSTIEYCCTTAEKL-VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTV 255
            AR HA +      I Y   T E++  E    FD V+  EVIEHVADP  F ++ S L  
Sbjct: 124 TARAHAGM--VGLDIAYRAATVEQIEAEGAGPFDVVLTMEVIEHVADPEAFVRACSRLVR 181

Query: 256 SEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKE 315
             G  +++T+NR++++ A   +AAE+IL W+P GTH W  FL P+E+  +L + ++ V+ 
Sbjct: 182 PGGVMMVATLNRTLKSLALGKVAAEYILRWVPAGTHDWRQFLKPDEIRTMLAQEAVTVEG 241

Query: 316 MAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
             G  Y+PLT RWS SDD  +N++   T+ +
Sbjct: 242 PYGLNYDPLTDRWSQSDDAGINYMMVATRTA 272


>gi|393769856|ref|ZP_10358373.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
           GXF4]
 gi|392724678|gb|EIZ82026.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
           GXF4]
          Length = 253

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 113/235 (48%), Positives = 152/235 (64%), Gaps = 2/235 (0%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNI 164
           +   E+A+F A+A TWWD  GP + LH  NP RLA+IR  LCR F +DP +  P +GL I
Sbjct: 14  VDRGEVARFDALAATWWDEAGPMRVLHRFNPVRLAYIRDALCRRFGRDPQTPFPLDGLTI 73

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
            DVGCGGG+LSEPLAR+GA VTG+D  E+NI +AR HA  +     ++Y   T E +V  
Sbjct: 74  CDVGCGGGVLSEPLARLGAQVTGLDPAEQNIAVARAHA--ESAGVPVDYRGETIEAVVAA 131

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
            + FDAV+  EVIEHVAD   F ++  A     G    +T+NR+MR++A AI+ AE++L 
Sbjct: 132 GQTFDAVLIMEVIEHVADMPAFVRTACAAVKPGGMLFGATLNRTMRSFAMAIVGAEYVLG 191

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           WLP+GTH W  F+TPEE    ++   +DV +  G VYNPLT  W  S D +VN++
Sbjct: 192 WLPRGTHDWEKFVTPEEFGRAIRAGGLDVTDTIGVVYNPLTDGWRTSRDKAVNYM 246


>gi|346994445|ref|ZP_08862517.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Ruegeria sp.
           TW15]
          Length = 248

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 113/246 (45%), Positives = 164/246 (66%), Gaps = 3/246 (1%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P+++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  + RPFEG
Sbjct: 5   PNTVDPSEIAKFEAMAAEWWDPHGKFKPLHMLNPCRLDYITQQIAGEFDRDLKTPRPFEG 64

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
           L ++D+GCGGG+LSEP+AR+GATV G DA E N+ +AR+HA  +     I+Y  TTAE +
Sbjct: 65  LRLLDIGCGGGLLSEPMARLGATVVGADAAEGNLPVARIHA--EQSGLQIDYRHTTAEDM 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
                +FD V+  EV+EHVADP  F  +   L    G  + STINR+ ++YA A+  AE 
Sbjct: 123 AAAGEQFDVVLNMEVVEHVADPLGFLTASQQLLKPGGLLICSTINRNPKSYAMAVFGAEV 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           ++ WLP+GTH+WS F+TP+EL  +L++A ++  +  GFV+NP+   WS+SD D+SVN++ 
Sbjct: 183 VMRWLPRGTHEWSKFITPDELFDLLRQAGLEPVDRKGFVFNPILWSWSVSDRDLSVNYVT 242

Query: 341 FGTKNS 346
              K+ 
Sbjct: 243 ASVKSG 248


>gi|374293224|ref|YP_005040259.1| 3-demethylubiquinone-9 3-methyltransferase [Azospirillum lipoferum
           4B]
 gi|357425163|emb|CBS88046.1| 3-demethylubiquinone-9 3-O-methyltransferase [Azospirillum
           lipoferum 4B]
          Length = 240

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/238 (48%), Positives = 159/238 (66%), Gaps = 5/238 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ++A+FSAIA  WWD  G +KPLH LNP RL +IR  +C+   +DP +  P  GL +VD+G
Sbjct: 5   DVARFSAIAAEWWDPTGKFKPLHRLNPLRLTYIRDAVCKRLGRDPLAPDPLAGLRVVDIG 64

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKLVEEQRK 227
           CGGG+L+EP+ARMGATV G+DA EKNIK A  HA    ET +T++Y  TTAE L     K
Sbjct: 65  CGGGLLAEPIARMGATVVGVDASEKNIKTAATHA---AETGTTVDYRATTAEALAASGEK 121

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+A EVIEHVAD   F KSLS L    G   ++T+NR+ +++A AI+ AE+IL WLP
Sbjct: 122 FDVVLAMEVIEHVADVPLFVKSLSELLAPGGVLFLATLNRTPKSFALAIVGAEYILRWLP 181

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDISVNFIAFGTK 344
           +GTH W  FL P EL   ++   + V+++ G  YNPL+  + L + D+ VN++ +  +
Sbjct: 182 RGTHNWRQFLRPSELNAAVRTYGLSVRDLTGITYNPLSDEFRLNARDLDVNYMGWAER 239


>gi|110677790|ref|YP_680797.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
           denitrificans OCh 114]
 gi|123172998|sp|Q16D32.1|UBIG_ROSDO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|109453906|gb|ABG30111.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
           denitrificans OCh 114]
          Length = 248

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 164/243 (67%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D  S  PF+GL
Sbjct: 6   TTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPEPFKGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L+EP+AR+GA V G DA E+NI +AR+HA+      TI+Y  TTAE L 
Sbjct: 66  RILDIGCGGGLLAEPMARLGADVVGADAAERNIPVARVHAE--QSGLTIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD V+  EV+EHVA P ++  +   L    G  V ST+NR+ ++Y  AII AEH+
Sbjct: 124 AEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGLQVCSTLNRNPKSYVMAIIGAEHV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH+WS F+TP+EL  +L+++ +D  +  GFV+NP++  W LS  D+SVN++  
Sbjct: 184 MRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNYVTA 243

Query: 342 GTK 344
             K
Sbjct: 244 SVK 246


>gi|299132848|ref|ZP_07026043.1| ubiquinone biosynthesis O-methyltransferase [Afipia sp. 1NLS2]
 gi|298592985|gb|EFI53185.1| ubiquinone biosynthesis O-methyltransferase [Afipia sp. 1NLS2]
          Length = 250

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/249 (44%), Positives = 159/249 (63%), Gaps = 3/249 (1%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + +    +A  S+  AE+A+FS +++TWWD  G  KPLH +NP RLA+IR   CR F ++
Sbjct: 1   MTDTSHATASPSVDPAEIARFSKLSETWWDPNGKMKPLHRINPLRLAYIRDAACRKFERN 60

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
           P S     GL I+D+GCG G+L EPLAR+GA V GID  E NI +A+LHA+      +++
Sbjct: 61  PKSLNCLSGLRILDIGCGAGLLCEPLARLGAQVVGIDPSETNISVAKLHAERG--HLSVD 118

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y CTT E+ ++ + +FD V+A EV+EHV D   F    +A     G   +ST+NR+ +++
Sbjct: 119 YRCTTVEQ-IDLRERFDIVLAMEVVEHVTDVGAFLARCAAAMKPSGLMAVSTLNRTWKSF 177

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE++L WLP+GTHQW  F+TPEEL   L    + + E  G V+NPL  RW LS 
Sbjct: 178 ALAIVGAEYVLRWLPRGTHQWDKFVTPEELTNYLDACKLGITEQTGVVFNPLADRWGLSS 237

Query: 333 DISVNFIAF 341
           D+ VN++  
Sbjct: 238 DMDVNYMVI 246


>gi|418940335|ref|ZP_13493703.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium sp. PDO1-076]
 gi|375052955|gb|EHS49354.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium sp. PDO1-076]
          Length = 249

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 157/244 (64%), Gaps = 2/244 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A +++  +E+ +FSA+A  WWD  G ++PLH +NP RLA+IR  +C H+ +DP   RP E
Sbjct: 5   ARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKINPVRLAYIRDMVCAHYGRDPKGHRPLE 64

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL I+D+GCGGG+LSEP+ARMGA V G DA EKNIKIA  HA        ++Y   TAE 
Sbjct: 65  GLRILDIGCGGGLLSEPVARMGADVLGADASEKNIKIAMTHA--GQSGVPVDYRAVTAEA 122

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L E    FD V   EV+EHVAD   F  + +++    G  ++STINR+ +A A AI+ AE
Sbjct: 123 LAEAGETFDIVFNMEVVEHVADVDFFLSTCASMVRPGGLMLVSTINRTFKAAALAIVGAE 182

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L WLP+GTHQ+   + PEE+   L  + + + EM G  +NPL  +W+LS DI VN++ 
Sbjct: 183 YVLRWLPRGTHQYEKLVRPEEIEAPLTTSGMQIVEMKGVFFNPLQNQWNLSSDIDVNYMV 242

Query: 341 FGTK 344
              +
Sbjct: 243 LAKR 246


>gi|170742853|ref|YP_001771508.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
           4-46]
 gi|226725552|sp|B0UAV0.1|UBIG_METS4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|168197127|gb|ACA19074.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium sp.
           4-46]
          Length = 249

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 114/242 (47%), Positives = 157/242 (64%), Gaps = 4/242 (1%)

Query: 100 SAPS--SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           SAP+  S+   E+A+F  IA TWWD  GP + LH  NP RLA+IR   CRH  +DP    
Sbjct: 2   SAPTGPSIDAREVARFERIAATWWDEAGPMRVLHRFNPVRLAYIRDAACRHHGRDPLGPE 61

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           P  GL +VD+GCGGG+LSEPLAR+GA VTG+D    NI++A+ HA  +     ++Y   T
Sbjct: 62  PLAGLTLVDIGCGGGVLSEPLARLGARVTGLDPAPTNIRVAKAHA--EEAGVPVDYRPQT 119

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
            E +V    +FD V+A EV+EHVAD A F ++  A     G    +TINR+MR++A AI+
Sbjct: 120 IESVVAAGERFDLVVAMEVVEHVADMASFVRTACAAVRPGGLFFAATINRTMRSFALAIV 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L WLP+GTH W  F+TPEEL   ++   + V +  G VY+PL+GRWS + D +VN
Sbjct: 180 GAEYVLGWLPRGTHDWEKFVTPEELARAVESGGLVVADTTGVVYHPLSGRWSAARDTAVN 239

Query: 338 FI 339
           ++
Sbjct: 240 YM 241


>gi|254488301|ref|ZP_05101506.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseobacter sp.
           GAI101]
 gi|214045170|gb|EEB85808.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseobacter sp.
           GAI101]
          Length = 248

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 115/243 (47%), Positives = 162/243 (66%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+ KF A+A  WWD  G +KPLH LNP RL +I + +   F +D    +PF GL
Sbjct: 6   STVDPAEIEKFQAMAAEWWDENGKFKPLHMLNPCRLEYITNQIAGEFDRDLKMDKPFAGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA E+NI +A++HA+      TI+Y  TTAE + 
Sbjct: 66  RILDIGCGGGLLSEPMARLGADVVGADAAERNIPVAQVHAE--QSGLTIDYRHTTAEAMA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVA P ++  +   L    G  + ST+NR+ ++Y  AII AEH+
Sbjct: 124 EAGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGLQICSTLNRNPKSYMMAIIGAEHV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH+WS F+TP+EL  +L+ A +   +  GFV+NP+   WSLSD D+SVN++  
Sbjct: 184 MRWLPKGTHEWSKFITPDELFDLLRNAGLTPVDRKGFVFNPILWSWSLSDRDLSVNYVTA 243

Query: 342 GTK 344
            TK
Sbjct: 244 STK 246


>gi|451941595|ref|YP_007462232.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. berkhoffii str. Winnie]
 gi|451900982|gb|AGF75444.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella vinsonii
           subsp. berkhoffii str. Winnie]
          Length = 247

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 158/242 (65%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  FS IA  WWD +G ++PLH  NPTRLA+IR  +C  F +DP S  PFE L
Sbjct: 7   TTIDQNEIDHFSHIASEWWDPQGKFRPLHQFNPTRLAYIREKICLEFNRDPISLMPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA  +    +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVVGADAAQTNIEVAKIHATQN--GLSIDYRTTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E+ +FD ++  EV+EHVAD   F  + + L   +G   +ST+NR+ +A+  AI+ AE+I
Sbjct: 125 NEEAQFDIILNMEVVEHVADVHLFMAATAKLLKPQGLMFVSTLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL  +L + ++ V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKSLLSKNALTVIDKIGMTYNPLNDSWNRSKDMDVNYMLLA 244

Query: 343 TK 344
            K
Sbjct: 245 KK 246


>gi|395765642|ref|ZP_10446236.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. DB5-6]
 gi|395411196|gb|EJF77730.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. DB5-6]
          Length = 247

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 107/246 (43%), Positives = 160/246 (65%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           + A +++  +E+  FS IAD WW+ +G ++PLH  NPTRL++IR  +C  F +DP S  P
Sbjct: 3   NEAHTTIDQSEINHFSRIADEWWNPQGKFRPLHQFNPTRLSYIREKICLEFHRDPLSLMP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FE L I+D+GCGGG+L EP+ R+GA V G DA + NI++A++HA  +    +I+Y  TTA
Sbjct: 63  FENLKILDIGCGGGLLCEPIVRLGAMVIGADAAQTNIEVAKIHAAQN--NLSIDYRTTTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L  E  +FD ++  EV+EHVAD   F  + + +   +G   +ST+NR+ +A+  AI+ 
Sbjct: 121 EALANEGEQFDIILNMEVVEHVADVNLFIAATAKMLKPQGLMFVSTLNRTWKAWGLAIVG 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLPKGTH +  FL P+EL  +L   ++ + +  G  YNPL  RW+LS D+ VN+
Sbjct: 181 AEYILRWLPKGTHNYKKFLKPQELKHLLSENALTIVDEIGITYNPLKDRWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    K
Sbjct: 241 LLLAKK 246


>gi|83950737|ref|ZP_00959470.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius nubinhibens
           ISM]
 gi|83838636|gb|EAP77932.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius nubinhibens
           ISM]
          Length = 251

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 118/248 (47%), Positives = 166/248 (66%), Gaps = 9/248 (3%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           ++  +A S++  AE+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D   
Sbjct: 3   SEMQAAQSTIDPAEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITAQIAAEFDRDLRE 62

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIE 212
            RPF GL ++D+GCGGG+LSEP+AR GATV G DA E N+ +ARLHA+   LD     I+
Sbjct: 63  DRPFAGLRLLDIGCGGGLLSEPMARRGATVIGADAAEGNLPVARLHAEQGGLD-----ID 117

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  TTAE L +    FD V+  EV+EHVADP +F  +   L    G  + STINR+ +++
Sbjct: 118 YRHTTAEALADAGETFDVVLNMEVVEHVADPLDFLTACRRLLKPGGLHLCSTINRNPKSF 177

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE+++ WLPKGTH WS F+TP+EL  +L++A +   +  GFV+NP+   WS+SD
Sbjct: 178 AMAILGAEYVMRWLPKGTHDWSKFITPDELYDLLKQAGLSPVDRKGFVFNPIAWSWSISD 237

Query: 333 -DISVNFI 339
            D+SVN++
Sbjct: 238 RDLSVNYV 245


>gi|56694995|ref|YP_165341.1| 3-demethylubiquinone-9 3-methyltransferase [Ruegeria pomeroyi
           DSS-3]
 gi|81350801|sp|Q5LWM6.1|UBIG_SILPO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|56676732|gb|AAV93398.1| 3-demethylubiquinone-9 3-methyltransferase [Ruegeria pomeroyi
           DSS-3]
          Length = 248

 Score =  244 bits (622), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 112/239 (46%), Positives = 164/239 (68%), Gaps = 3/239 (1%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P+++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  + RPF G
Sbjct: 5   PNTVDPSEIAKFEAMAAEWWDPHGKFKPLHMLNPCRLDYITRQIAGEFDRDLGTERPFAG 64

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
           L ++D+GCGGG+LSEP+AR+GA V G DA E N+ +AR+HA+       I+Y  TTAE L
Sbjct: 65  LRLLDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHAE--QSGLEIDYRHTTAEAL 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V+  EV+EHVADP  + ++   L    G  + STINR+ ++YA AI+ AE 
Sbjct: 123 AEAGEQFDVVLNMEVVEHVADPLSYLRATHDLLKPGGLQICSTINRNPKSYAMAILGAEV 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           ++ WLP+GTH WS F+TP+EL  +L++A ++  +  GFV+NP++ +WS+SD D+SVN++
Sbjct: 183 VMRWLPRGTHDWSKFITPDELFDLLRQAGLEPVDRKGFVFNPISWQWSISDRDLSVNYV 241


>gi|307942486|ref|ZP_07657835.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseibium sp.
           TrichSKD4]
 gi|307774307|gb|EFO33519.1| 3-demethylubiquinone-9 3-O-methyltransferase [Roseibium sp.
           TrichSKD4]
          Length = 252

 Score =  243 bits (621), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 109/245 (44%), Positives = 161/245 (65%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A S++  AE+A+FSA+AD WWD  G +KPLH  NP RL++I+ T+CRHF +DP S   F
Sbjct: 7   TANSTIDDAEVARFSALADQWWDPTGKFKPLHKFNPVRLSYIKETVCRHFGRDPKSVDAF 66

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           + L  +D+GCGGG+LSEP+AR+GA V G DA + NI++A++H  +     +I+Y   TAE
Sbjct: 67  KRLRFLDIGCGGGLLSEPMARLGADVLGADASQTNIEVAKVH--MQRSGLSIDYRADTAE 124

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L     KFD V+  EV+EHVAD   F K+ S +    G   ++TINR+++AYA AI+ A
Sbjct: 125 NLAAAGEKFDVVLNMEVVEHVADVPLFLKATSDMVRPGGLMFVATINRTLKAYALAIVGA 184

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLPKGTH +   + P E+   L+ + + + +  G  +NPLT  WS S+D+ VN++
Sbjct: 185 EYVLRWLPKGTHSYEKLVRPSEIEAPLKASGLSIVQSTGVTFNPLTDSWSRSNDLDVNYM 244

Query: 340 AFGTK 344
               +
Sbjct: 245 MLAER 249


>gi|158425924|ref|YP_001527216.1| ubiquinone biosynthesis O-methyltransferase [Azorhizobium
           caulinodans ORS 571]
 gi|172047842|sp|A8HVC4.1|UBIG_AZOC5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|158332813|dbj|BAF90298.1| ubiquinone biosynthesis O-methyltransferase [Azorhizobium
           caulinodans ORS 571]
          Length = 253

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 159/245 (64%), Gaps = 2/245 (0%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           + +A +++  +E+A+F A+   WWD +G   PLHA+NP RL F+R  L RHF  D  S R
Sbjct: 2   RMTANATIDPSEVARFDALGAQWWDPKGKMAPLHAINPVRLGFVRDVLVRHFGHDARSLR 61

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           P +GL I+D+GCGGG+LSEPLARMGA + G+D    NI +A+ HAD       ++Y   T
Sbjct: 62  PLKGLRILDIGCGGGLLSEPLARMGADMVGVDPAPGNIVVAQSHAD--EAGVRVDYRQGT 119

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE+L +   +FD V+A EV+EHVAD   F +    +    G  ++ST+NR+++++A AI+
Sbjct: 120 AEELADAGERFDVVLALEVVEHVADVGLFLRRAGEMVNPNGIMIVSTLNRTVKSFALAIV 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L WLP+GTH+W  F+TP EL   +  A  ++ E+AG V++PL G W ++ D  VN
Sbjct: 180 GAEYVLRWLPRGTHRWDKFITPAELEAEMGAAGFEMSELAGMVFDPLRGEWKIAADTDVN 239

Query: 338 FIAFG 342
           +   G
Sbjct: 240 YFLVG 244


>gi|114762238|ref|ZP_01441706.1| 3-demethylubiquinone-9 3-methyltransferase [Pelagibaca bermudensis
           HTCC2601]
 gi|114545262|gb|EAU48265.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp.
           HTCC2601]
          Length = 250

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 113/242 (46%), Positives = 163/242 (67%), Gaps = 3/242 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  +E+AKF A+A  WWD  G +KPLH +NP RL +I   +   + +D  + +PFEGL 
Sbjct: 4   TVDPSEIAKFEAMAAEWWDPNGKFKPLHMMNPVRLDYITRQIAGEYDRDLTATKPFEGLR 63

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           IVD+GCGGG+L EP+AR+GA V G+DA E+NI +ARLHA+       I+Y  TTAE L  
Sbjct: 64  IVDIGCGGGLLCEPMARLGAEVVGVDAAERNIPVARLHAEQS--ELEIDYRHTTAEALAA 121

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           E   FD VI  EV+EHVA P  + K+  AL    G  + STINR+ +++A AI+ AE ++
Sbjct: 122 ENELFDVVINMEVVEHVASPPAYLKACQALLKPGGLHLCSTINRNPKSFAMAIVGAEWVM 181

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFG 342
            WLPKGTH+WS F+TP+EL  +L++A ++  +  G+V+NP++  W +SD D+SVN++   
Sbjct: 182 RWLPKGTHEWSKFITPDELYDLLRQAGLEPVDRKGYVFNPVSWSWKISDSDLSVNYVTAA 241

Query: 343 TK 344
            K
Sbjct: 242 IK 243


>gi|110635331|ref|YP_675539.1| 3-demethylubiquinone-9 3-methyltransferase [Chelativorans sp. BNC1]
 gi|123353220|sp|Q11E01.1|UBIG_MESSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|110286315|gb|ABG64374.1| 3-demethylubiquinone-9 3-methyltransferase [Chelativorans sp. BNC1]
          Length = 253

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 111/242 (45%), Positives = 160/242 (66%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ +FSA+A  WW+  G ++PLH  NP RLA+IR  +  HF +DP +A+PFEGL
Sbjct: 7   TTIDAGEVERFSALAQEWWNPNGKFRPLHKFNPVRLAYIRDNVAAHFGRDPRAAKPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA+V G DA   NI++ARLHA L+   S I+Y   TAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGASVVGADASATNIEVARLHA-LESGVS-IDYRAETAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++  KFD ++  EV+EHVAD   F +  + +    G   ++TINR+++A   AII AE++
Sbjct: 125 DQGEKFDIILNMEVVEHVADIDLFIEKCAEMLKPGGLMFVATINRTLKALGLAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + P+EL   L  A +  K+  G VYNPLT RW+ S D+ VN++   
Sbjct: 185 LRWLPRGTHQYGKLVRPDELERALASAGLITKDRTGVVYNPLTDRWNRSRDMDVNYMVLA 244

Query: 343 TK 344
            K
Sbjct: 245 EK 246


>gi|414165005|ref|ZP_11421252.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia felis ATCC
           53690]
 gi|410882785|gb|EKS30625.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia felis ATCC
           53690]
          Length = 252

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 158/244 (64%), Gaps = 4/244 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +S+PS +  AE+A+FS ++  WWD  G  KPLH +NP RLA+IR   CR F ++P S   
Sbjct: 10  NSSPS-VDPAEVARFSKLSSDWWDPNGRMKPLHRINPLRLAYIRDAACRKFERNPKSLNC 68

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             GL I+D+GCG G+L EPLAR+GA V GID  E NI +A+LHA+      +I+Y CTT 
Sbjct: 69  LSGLRILDIGCGAGLLCEPLARLGAQVVGIDPSETNISVAKLHAERG--HLSIDYRCTTV 126

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+ ++ + +FD V+A EV+EHV D   F    SA     G   +ST+NR+ +++A AI+ 
Sbjct: 127 EE-IDLRERFDIVLAMEVVEHVTDVGAFLLRCSAAMKPSGLMTVSTLNRTWKSFALAIVG 185

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLP+GTHQW  F+TPEEL   L    + + E  G V+NPL  RWSLS D+ VN+
Sbjct: 186 AEYVLRWLPRGTHQWDKFVTPEELTHYLDACKLGITEQTGVVFNPLADRWSLSSDMDVNY 245

Query: 339 IAFG 342
           +   
Sbjct: 246 MVIA 249


>gi|159046090|ref|YP_001534884.1| 3-demethylubiquinone-9 3-methyltransferase [Dinoroseobacter shibae
           DFL 12]
 gi|189037620|sp|A8LQ43.1|UBIG_DINSH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|157913850|gb|ABV95283.1| 3-demethylubiquinone-9 3-methyltransferase [Dinoroseobacter shibae
           DFL 12]
          Length = 248

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/233 (48%), Positives = 160/233 (68%), Gaps = 3/233 (1%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +ELAKF A+A  WWD  G ++PLH +NP RL +I   +   + +D  S  PF+GL I+D+
Sbjct: 11  SELAKFEAMAAEWWDPMGKFRPLHLMNPVRLDYITRQIAAEYGRDLKSPNPFKGLRILDI 70

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+L+EP+AR+GATV G DA E N+ +ARLHA+       I+Y  TTAE LV    +
Sbjct: 71  GCGGGLLAEPMARLGATVVGADAAEGNLPVARLHAE--KSGLEIDYRHTTAEALVAAGEQ 128

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD+V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE++L WLP
Sbjct: 129 FDSVLNMEVVEHVADPLAYLTACKDLLKPGGIMLCSTLNRNPKSFAMAIVGAEYVLKWLP 188

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           KGTH W  FLTP+EL  +L++A ++  +  G V+NPL+ +WSLSD D+SVN++
Sbjct: 189 KGTHDWRKFLTPDELTKLLEQAGLEPVDKKGMVFNPLSQQWSLSDRDLSVNYV 241


>gi|255074711|ref|XP_002501030.1| predicted protein [Micromonas sp. RCC299]
 gi|226516293|gb|ACO62288.1| predicted protein, partial [Micromonas sp. RCC299]
          Length = 252

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/251 (51%), Positives = 166/251 (66%), Gaps = 16/251 (6%)

Query: 109 ELAKFSAIADTWWDAE-GPYKPLHALNPTRLAFIRSTLCRHFRK--DPYSARPFEGLNIV 165
           E AKF A A  WWD E GP+ PLHA+NPTR+ FIR  L RHF    +P +  P  GL I+
Sbjct: 1   ETAKFEADAALWWDEERGPFAPLHAMNPTRVGFIREALARHFDGGIEPGTG-PLAGLRIL 59

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEE 224
           DVGCGGGIL E LAR+GA VTGIDA + NI IA  HA  DP  S  + Y  TTAE++   
Sbjct: 60  DVGCGGGILCESLARLGADVTGIDAAKGNIAIATAHAAKDPGMSRRVTYHATTAEEVAAA 119

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
             KFDAV++ EV+EHV DP  F + L ALT   GA  +ST+NR+ R+YA AI+AAE +L 
Sbjct: 120 GAKFDAVVSLEVVEHVNDPEGFVRQLEALTNPGGAVFMSTVNRTARSYALAIVAAERVLR 179

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNP----------LTGRWSLS-DD 333
           W+P GTH++  F+TPEEL  +  RA ++V+E AG VY P          + GRW+LS DD
Sbjct: 180 WVPPGTHEFDKFMTPEELAAVAHRAGLEVREAAGMVYTPPLPAPGRNGAVAGRWTLSGDD 239

Query: 334 ISVNFIAFGTK 344
           ++VN+I + +K
Sbjct: 240 LAVNYIVYLSK 250


>gi|154247015|ref|YP_001417973.1| ubiquinone biosynthesis O-methyltransferase [Xanthobacter
           autotrophicus Py2]
 gi|154161100|gb|ABS68316.1| ubiquinone biosynthesis O-methyltransferase [Xanthobacter
           autotrophicus Py2]
          Length = 247

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/237 (46%), Positives = 155/237 (65%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+A+F A+   WWD +G   PLHA+NP RLAF+R  L RHF +D  + RP +GL
Sbjct: 6   ATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALRPLKGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +I+D+GCGGG+LSEPLARMG  V GID    N++IAR HA        ++Y   TAE+L 
Sbjct: 66  SILDIGCGGGLLSEPLARMGGQVRGIDPAPGNVEIARAHA--AASGLAVDYEAVTAEELA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHVAD   F ++   L    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 124 SRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGVLVLSTLNRTAKSFALAIVGAEYV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP GTH+W  F+TPEEL   L  A    +E  G  Y PL+G + L++D+SVN+ 
Sbjct: 184 LRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYF 240


>gi|259417893|ref|ZP_05741812.1| 3-demethylubiquinone-9 3-O-methyltransferase [Silicibacter sp.
           TrichCH4B]
 gi|259346799|gb|EEW58613.1| 3-demethylubiquinone-9 3-O-methyltransferase [Silicibacter sp.
           TrichCH4B]
          Length = 247

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 114/244 (46%), Positives = 161/244 (65%), Gaps = 3/244 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D     PF GL
Sbjct: 6   STVDPSEIAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITRQIAGEFDRDLTMNAPFAGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA E N+ +AR+HA+       I+Y  TTAE L 
Sbjct: 66  RILDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHAE--QSGLKIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +    FD V+  EV+EHVADP  +  + + L    G  + STINR+ ++YA AI  AE +
Sbjct: 124 DAGEAFDVVLNMEVVEHVADPLSYLTATAQLLKPGGLQICSTINRNPKSYAMAIFGAEVV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLP+GTH+WS F+TP+EL  +LQ A ++  +  GFV+NP+  +WS+SD D+SVN++  
Sbjct: 184 MRWLPRGTHEWSKFITPDELFELLQNAGLNPVDRKGFVFNPILWKWSISDRDLSVNYVTA 243

Query: 342 GTKN 345
            TK+
Sbjct: 244 STKS 247


>gi|427426876|ref|ZP_18916922.1| 3-demethylubiquinol 3-O-methyltransferase [Caenispirillum salinarum
           AK4]
 gi|425884240|gb|EKV32914.1| 3-demethylubiquinol 3-O-methyltransferase [Caenispirillum salinarum
           AK4]
          Length = 251

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 154/236 (65%), Gaps = 2/236 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+AD WWD  G +KPLH  NP R+AFIR +L  HF +D    RPFEGL ++D+G
Sbjct: 16  EMAKFEAMADAWWDPVGKFKPLHKFNPARVAFIRDSLGAHFGRDLGRPRPFEGLTLLDIG 75

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSEP+AR+G +VTG+DAVEKN+ +ARLHA+       I+Y C  AE ++ +  +F
Sbjct: 76  CGGGLLSEPMARLGFSVTGLDAVEKNVGVARLHAER--SDLAIDYRCQLAEDVLAQGERF 133

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHVAD   F ++   L    GA V +T+NR++++ A A   AE++L W+P 
Sbjct: 134 DVVLTMEVVEHVADVPLFLRTCGDLVKPGGALVGATLNRTLKSLALAKFGAEYVLRWVPA 193

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTH W  F+ P E    L+   +  + + G  + PLT  W ++ D+ VN++ F TK
Sbjct: 194 GTHDWRKFVKPSEFAAGLREGGLVTEALRGMTFLPLTDTWEVTGDLDVNYMIFATK 249


>gi|83310710|ref|YP_420974.1| 3-demethylubiquinone-9 3-methyltransferase [Magnetospirillum
           magneticum AMB-1]
 gi|109895673|sp|Q2W6W0.1|UBIG_MAGSA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|82945551|dbj|BAE50415.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Magnetospirillum magneticum AMB-1]
          Length = 249

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 110/238 (46%), Positives = 160/238 (67%), Gaps = 5/238 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F+A+A+ WWD +G +KPLH  NP RLAF+R     HF +D    RPFEGL ++DVG
Sbjct: 16  EIARFTAMAEAWWDPQGKFKPLHRFNPVRLAFMRRHFAAHFGRDESLMRPFEGLTLLDVG 75

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
            GGG+LSEPLARMG  VTGIDA +KN+ +ARLHA+   +T   ++Y  +T E+L +    
Sbjct: 76  SGGGLLSEPLARMGFAVTGIDAGDKNVAVARLHAE---QTGVPVDYRVSTPEQL-DPNEA 131

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V++ EV+EHV D + F    +A     G  + +T+NR+ +A+A A++ AE++L WLP
Sbjct: 132 FDVVLSMEVVEHVPDVSAFLGHATARLKPGGVFMGATLNRTAKAWALAVVGAEYVLGWLP 191

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           KGTH W+ F+ P E   +L+   I V++MAG  +NPL+  W  +D++ VN++ FG K 
Sbjct: 192 KGTHDWNKFVRPSEFAAMLRDRGITVRQMAGMAFNPLSDTWRETDNLDVNYMLFGVKG 249


>gi|255263500|ref|ZP_05342842.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thalassiobium sp.
           R2A62]
 gi|255105835|gb|EET48509.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thalassiobium sp.
           R2A62]
          Length = 251

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 113/241 (46%), Positives = 162/241 (67%), Gaps = 3/241 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  AE+AKF A+A  WWD +G +KPLH LNP RL +I   +   F +D  +A PF
Sbjct: 3   NAQTTIDPAEVAKFEAMAAEWWDLDGKFKPLHMLNPCRLDYITRQIAAEFDRDLDTAAPF 62

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            GL I+D+GCGGG+L EP+AR+GA + G DA E+NI +AR+HA+       I+Y  TTAE
Sbjct: 63  AGLRILDIGCGGGLLCEPMARLGAEIVGADAAERNIPVARVHAE--QSGLDIDYRHTTAE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            + E   +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ ++Y  AII A
Sbjct: 121 AMAEAGEQFDVVLNMEVVEHVADPLLYITACQQLLKPGGLHICSTLNRNPKSYIFAIIGA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           EH++ WLPKGTH+W+ F+TP+EL  +L +A ++  +  GFV+NPL   W LSD D+SVN+
Sbjct: 181 EHVMRWLPKGTHEWNKFITPDELFDLLSQAGLEPVDRKGFVFNPLGWSWKLSDRDLSVNY 240

Query: 339 I 339
           +
Sbjct: 241 V 241


>gi|395778588|ref|ZP_10459100.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella elizabethae
           Re6043vi]
 gi|423715100|ref|ZP_17689324.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella elizabethae
           F9251]
 gi|395417796|gb|EJF84133.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella elizabethae
           Re6043vi]
 gi|395430584|gb|EJF96626.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella elizabethae
           F9251]
          Length = 247

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 157/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+IR  +C  F +DP S  PF+ L
Sbjct: 7   TTVDQSEIDHFSRIAKEWWDPQGKFRPLHQFNPTRLAYIREKICLEFNRDPVSLTPFDNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G+DA + NI++A++HA  +    +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGAIVVGVDAAQTNIEVAKIHAAQN--NLSIDYRTTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  KFD ++  EV+EHVAD   F K+ + +   +G   ++T+NR+ +A+  AI+ AE+I
Sbjct: 125 NEGEKFDIILNMEVVEHVADVNLFIKATAKMLKPQGLMFVATLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P EL   L + ++ V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPRELKNFLSKNALSVIDEIGITYNPLNDSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|170746584|ref|YP_001752844.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653106|gb|ACB22161.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 253

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 109/235 (46%), Positives = 152/235 (64%), Gaps = 2/235 (0%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNI 164
           +  AE+A+F A+A TWWD  GP + LH  NP RLA+IR  LCR F +DP +  P +GL I
Sbjct: 14  VDRAEVARFDALAATWWDETGPMRVLHRFNPVRLAYIRDALCRRFGRDPKAPFPLDGLTI 73

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
            DVGCGGG+LSEPLAR+GA VTG+D  E+N+ +AR HA  +     ++Y   T E +V  
Sbjct: 74  CDVGCGGGVLSEPLARLGARVTGLDPAEQNVAVARTHA--EAAGVPVDYRGQTIEAVVAG 131

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FDAV+  EV+EHV+D   F ++  A     G    +T+NR++R++A AI+ AE++L 
Sbjct: 132 GESFDAVLIMEVVEHVSDMPAFVRTACAAVRPGGMLFGATLNRTLRSFALAIVGAEYVLG 191

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           WLP+GTH W  F+TP+EL   ++   +DV +  G VYNPLT  W    D +VN++
Sbjct: 192 WLPRGTHDWEKFVTPDELARAIRAGGLDVTDTVGVVYNPLTDGWRTGRDKAVNYM 246


>gi|146278801|ref|YP_001168960.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|166201214|sp|A4WW91.1|UBIG_RHOS5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|145557042|gb|ABP71655.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 247

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 114/241 (47%), Positives = 162/241 (67%), Gaps = 3/241 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SA S++  AE+AKF A+A  WW+  G +KPLH +NP RL +I   +   F +D  +  PF
Sbjct: 2   SATSTIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPCRLDYITEQIAAEFDRDLSAPLPF 61

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +GL ++D+GCGGG+LSEP+AR+GA V G DA  +NI +ARLHA+      TI+Y  TTAE
Sbjct: 62  QGLRLLDIGCGGGLLSEPMARLGADVVGADAAPRNIPVARLHAE--QSGLTIDYRNTTAE 119

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L     +FD V+  EV+EHVADP  +  +   L    G  V ST+NR+ +++A AI+ A
Sbjct: 120 DLAAAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMVCSTLNRNPKSFAMAIVGA 179

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           E I+ WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLSD D+SVN+
Sbjct: 180 EWIMRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSDRDLSVNY 239

Query: 339 I 339
           +
Sbjct: 240 V 240


>gi|294675767|ref|YP_003576382.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacter
           capsulatus SB 1003]
 gi|294474587|gb|ADE83975.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacter
           capsulatus SB 1003]
          Length = 247

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 161/243 (66%), Gaps = 3/243 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A  ++  AE+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D  + RP
Sbjct: 2   ETATKTIDPAEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITTQIAAQFGRDLRAPRP 61

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL ++D+GCGGG+L+EP+AR+GATV G DA  KNI +A+LHA  +    TI+Y    A
Sbjct: 62  FEGLRLLDIGCGGGLLAEPMARLGATVVGADAAPKNIPVAKLHA--EQSGLTIDYRNCAA 119

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L     +FD V+A E+IEHV+D   F  + +AL  S G  ++ST+NR+ ++Y  AI  
Sbjct: 120 EDLAAAGERFDVVLAMEIIEHVSDTQGFTDTCAALLKSGGLMIMSTLNRNPKSYVMAIFG 179

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE ++ WLP GTH WS F+TP+EL  ++++A +D  +  G V+NPL   WSLS  D+SVN
Sbjct: 180 AERVMRWLPVGTHDWSKFVTPDELYELMRKAGLDPIDRKGMVFNPLGWSWSLSSRDLSVN 239

Query: 338 FIA 340
           + A
Sbjct: 240 YAA 242


>gi|49473951|ref|YP_031993.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella quintana
           str. Toulouse]
 gi|57013200|sp|Q6G0I1.1|UBIG_BARQU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|49239454|emb|CAF25805.1| 3-demethylubiquinone-93-methyltransferase [Bartonella quintana str.
           Toulouse]
          Length = 247

 Score =  241 bits (614), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 159/242 (65%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ +FS IA  WW+ +G ++PLH LNPTRLA+IR  +C  F +DP S  PFE L
Sbjct: 7   TTIDQDEIDRFSRIAAEWWNPKGKFRPLHQLNPTRLAYIREKICLAFNRDPVSLMPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G+DA + NI++A+LHA       +I+Y  T AE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGAMVVGVDAAQTNIEVAKLHA--TQSDLSIDYRTTIAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++  KFD ++  EV+EHVAD   F  + + +  S+G   +ST+NR+ +A+  AI+ AE+I
Sbjct: 125 DKGEKFDIILNMEVVEHVADVNLFIAATAKMLKSQGVMFVSTLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL  +L + ++ V +  G  YNP+   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKNLLSKNALTVIDEIGITYNPVNDSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|403530210|ref|YP_006664739.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella quintana
           RM-11]
 gi|403232282|gb|AFR26025.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella quintana
           RM-11]
          Length = 247

 Score =  241 bits (614), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 159/242 (65%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ +FS IA  WW+ +G ++PLH LNPTRLA+IR  +C  F +DP S  PFE L
Sbjct: 7   TTIDQNEIDRFSRIAAEWWNPKGKFRPLHQLNPTRLAYIREKICLAFNRDPVSLMPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G+DA + NI++A+LHA       +I+Y  T AE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGAMVVGVDAAQTNIEVAKLHA--TQSDLSIDYRTTIAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++  KFD ++  EV+EHVAD   F  + + +  S+G   +ST+NR+ +A+  AI+ AE+I
Sbjct: 125 DKGEKFDIILNMEVVEHVADVDLFIAATAKMLKSQGVMFVSTLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL  +L + ++ V +  G  YNP+   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKNLLSKNALTVIDEIGITYNPVNDSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|260429256|ref|ZP_05783233.1| 3-demethylubiquinone-9 3-O-methyltransferase [Citreicella sp. SE45]
 gi|260419879|gb|EEX13132.1| 3-demethylubiquinone-9 3-O-methyltransferase [Citreicella sp. SE45]
          Length = 248

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 110/233 (47%), Positives = 160/233 (68%), Gaps = 3/233 (1%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+AKF A++  WWD  G +KPLH +NP RL +I   +   + +D  + RPFEGL IVD+
Sbjct: 8   SEIAKFEAMSAEWWDPHGKFKPLHMMNPVRLDYITRQVAGEYGRDLSAPRPFEGLRIVDI 67

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+L EP+AR+GA V G+DA E+NI +A+LHA+       I+Y  TTAE L E    
Sbjct: 68  GCGGGLLCEPMARLGAEVVGVDAAERNIPVAQLHAE--QSGLKIDYRHTTAEALAEAGEL 125

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ AE ++ WLP
Sbjct: 126 FDVVLNMEVVEHVADPLAYLTACRQLLKPGGLHLCSTINRNAKSFAMAIVGAEWVMRWLP 185

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           KGTH+WS F+TP+EL  ++++A +D  +  G+V+NP++  WS+SD D+SVN++
Sbjct: 186 KGTHEWSKFITPDELCELMRKAGLDPVDRKGYVFNPVSWSWSISDRDLSVNYV 238


>gi|149204341|ref|ZP_01881308.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. TM1035]
 gi|149142226|gb|EDM30273.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. TM1035]
          Length = 251

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 115/253 (45%), Positives = 165/253 (65%), Gaps = 9/253 (3%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           ++  +A S++   E+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D   
Sbjct: 3   SRMQAAQSTIDPTEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITTQIAAEFDRDLRD 62

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIE 212
             PF GL ++D+GCGGG+LSEP+AR+GATV G DA  +NI +A++HA    LD     I+
Sbjct: 63  QTPFAGLRLLDIGCGGGLLSEPMARLGATVVGADAAPRNIPVAQVHAAQSGLD-----ID 117

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  TTAE L     +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++Y
Sbjct: 118 YRHTTAEDLAAAGEQFDVVLNMEVVEHVADPLTYLTACQQLLKPGGLHICSTINRNPKSY 177

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE+++ WLPKGTH W+ F+TP+EL  +L+ A+++  +  GFV+NP+T  W LSD
Sbjct: 178 AMAIVGAEYVMRWLPKGTHDWAKFITPDELYDLLRNAALEPVDRKGFVFNPITWGWRLSD 237

Query: 333 -DISVNFIAFGTK 344
            D+SVN++    K
Sbjct: 238 RDLSVNYVTASVK 250


>gi|319408182|emb|CBI81835.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           schoenbuchensis R1]
          Length = 248

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 106/249 (42%), Positives = 162/249 (65%), Gaps = 5/249 (2%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           NK H+   ++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP S
Sbjct: 3   NKAHT---TIDQSEIDHFSQIASEWWNPQGKFRPLHQFNPTRLAYIKEKICLEFDRDPMS 59

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
             PFEGL I+D+GCGGG+L EP+AR+GAT+ G DA + NI++A+ HA       +I+Y  
Sbjct: 60  LTPFEGLRILDIGCGGGLLCEPMARLGATIIGADASQTNIEVAKTHA--IQSGLSIDYRA 117

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           TTAE L +E+ +FD ++  E++EHVAD   F  + + +   +G   ++T+NR+ +A+  A
Sbjct: 118 TTAETLADEEEQFDVILNMEIVEHVADVNLFMSATAKMLKPQGLMFVATLNRTWKAWGLA 177

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           I+ AE+IL WLPKGTH +  FL P+EL  +L + ++ V +  G  YNPL   W+ S D+ 
Sbjct: 178 IVGAEYILRWLPKGTHDYKKFLKPQELKKLLSQNTLSVIDEIGITYNPLNDSWNRSKDMD 237

Query: 336 VNFIAFGTK 344
           VN++    +
Sbjct: 238 VNYMLLAKR 246


>gi|163867842|ref|YP_001609046.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum
           CIP 105476]
 gi|189037614|sp|A9IQF4.1|UBIG_BART1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|161017493|emb|CAK01051.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum
           CIP 105476]
          Length = 247

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 107/242 (44%), Positives = 155/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +EL  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F +DP S  PF+ L
Sbjct: 7   TTVDQSELDHFSRIATEWWNPQGKFRPLHQFNPTRLAYIREKICLEFNRDPVSLMPFDNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G+DA + NI +A++HA       +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVVGVDAAQTNIDVAKIHA--AQNNLSIDYRTTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  KFD ++  EV+EHVAD   F  + + +   +G   ++T+NR+ +A+  AII AE+I
Sbjct: 125 NEGEKFDIILNMEVVEHVADVNLFINATAKMLKPQGLMFVATLNRTWKAWGFAIIGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P EL   L + ++ V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPRELKNFLSKNALTVIDEIGITYNPLNDSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|407784815|ref|ZP_11131964.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Celeribacter
           baekdonensis B30]
 gi|407204517|gb|EKE74498.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Celeribacter
           baekdonensis B30]
          Length = 246

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 114/245 (46%), Positives = 160/245 (65%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+AKF A+A  WWD  G +KPLH LNP RL +I S +   F +D  + RPFEGL
Sbjct: 4   STIDPQEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITSQIAAEFGRDLSAERPFEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GATV G DA   N+ +A+LHA  +     I+Y  T AE L 
Sbjct: 64  RLLDIGCGGGLLSEPMARLGATVVGADAAAGNLPVAQLHA--EKSGLVIDYRHTAAESLA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHV+DP  +  +   L    G  + STINR+ ++Y  AI+ AE I
Sbjct: 122 EAGEQFDVVLNMEVVEHVSDPLGYMTACQMLLKPGGLMIASTINRNPKSYMMAIVGAEVI 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAF 341
           + WLPKGTH+W  F+TP+EL  ++++A +   +  GFV+NP+   WSLS  D+SVN++  
Sbjct: 182 MRWLPKGTHEWKKFITPDELYALIEKAGLSPVDRKGFVFNPVLWTWSLSARDLSVNYVTA 241

Query: 342 GTKNS 346
            TK S
Sbjct: 242 STKPS 246


>gi|372282347|ref|ZP_09518383.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Oceanicola sp.
           S124]
          Length = 248

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 111/238 (46%), Positives = 159/238 (66%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++  AE+AKF A+A  WWD  G +KPLH +NP RL +I S +   + +DP S RPFEGL
Sbjct: 6   QTVDDAEVAKFQAMAAEWWDPTGKFKPLHMMNPVRLDYITSQIAAEYARDPGSDRPFEGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA E+NI +AR HA  +     I+Y  TTAE L 
Sbjct: 66  RILDIGCGGGLLCEPMARLGAEVVGADAAERNIPVARAHA--EQSGLVIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ AE +
Sbjct: 124 EAGEQFDVVLNMEVVEHVADPLAYLSACHDLLKPGGLHLCSTINRNAKSFAMAIVGAEWV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH W  F+TP+EL  +++ A +   +  G+V+NP++ +WS+S  D+SVN++
Sbjct: 184 MRWLPKGTHDWQKFITPDELYQLIRDAGMTPVDRKGYVFNPVSWQWSISSRDLSVNYV 241


>gi|319406074|emb|CBI79704.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. AR 15-3]
          Length = 247

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 160/237 (67%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP S  PFEGL
Sbjct: 7   TTIDQSEIDHFSRIAAEWWDPQGKFRPLHNFNPTRLAYIKEKICLTFDRDPISLTPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G+DA + NI++A++HA       +I+Y   TAE LV
Sbjct: 67  RILDIGCGGGLLCEPMARLGATVIGVDAAQMNIEVAKIHA--IQSGLSIDYRTATAEVLV 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            +  +FD ++  EV+EHVA+   F ++ + +   +G   IST+NR+ +A+  AI+ AE+I
Sbjct: 125 NKGEQFDVILNMEVVEHVANVDLFIEATAKMIKPQGLMFISTLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLPKGTH +  FL P+EL  +L+  S+ + +  G  YNPLT  W+ S D+ VN+I
Sbjct: 185 LKWLPKGTHDYKKFLKPQELKKLLRTNSLVIIDELGLTYNPLTDSWNYSCDMDVNYI 241


>gi|85706926|ref|ZP_01038016.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. 217]
 gi|85668537|gb|EAQ23408.1| 3-demethylubiquinone-9 3-methyltransferase [Roseovarius sp. 217]
          Length = 252

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 116/253 (45%), Positives = 163/253 (64%), Gaps = 9/253 (3%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           ++  +A S++   E+AKF A+A  WWD  G +KPLH LNP RL +I + +   F +D   
Sbjct: 3   SRMQAAQSTIDPTEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITAQIAAEFDRDLRD 62

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIE 212
             PF GL ++D+GCGGG+LSEP+AR+GATV G DA  +NI +A++HA    LD     I+
Sbjct: 63  KAPFAGLRLLDIGCGGGLLSEPMARLGATVVGADAAPRNIPVAQVHAAQSGLD-----ID 117

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  TTAE L     +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++Y
Sbjct: 118 YRHTTAEDLAAAGEQFDTVLNMEVVEHVADPQTYLTACQQLLKPGGLHICSTINRNPKSY 177

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE+I+ WLPKGTH W+ F+TP+EL  +L+ A  +  +  GFV+NP+T  W LSD
Sbjct: 178 AMAIVGAEYIMRWLPKGTHDWTKFITPDELFDLLRNAGFEPVDRKGFVFNPITWGWRLSD 237

Query: 333 -DISVNFIAFGTK 344
            D+SVN++    K
Sbjct: 238 RDMSVNYVTASVK 250


>gi|84500732|ref|ZP_00998981.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola batsensis
           HTCC2597]
 gi|84391685|gb|EAQ04017.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola batsensis
           HTCC2597]
          Length = 247

 Score =  240 bits (612), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 108/238 (45%), Positives = 161/238 (67%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++  AE+AKF A+A  WWD +G +KPLH +NP RL ++   +   F +D    RPF GL
Sbjct: 5   GTIDPAEVAKFEAMAADWWDPDGKFKPLHMMNPVRLDYVTRQVAAEFDRDLSGDRPFAGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+L EP+AR+GA V G DA E+NI +AR+HA+       I+Y  TTAE L 
Sbjct: 65  RVLDIGCGGGLLCEPMARLGAEVVGADAAERNIPVARIHAE--QSGLRIDYRHTTAEALA 122

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ AE++
Sbjct: 123 EAGERFDVVLNMEVVEHVADPLSYLSACHDLLRPGGLHLCSTINRNPKSFAMAIVGAEYV 182

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLP+GTH+W  F+TP+EL  +L+RA +D  +  G+V+NP++ +W +SD D+SVN++
Sbjct: 183 MRWLPRGTHEWHRFITPDELFDLLRRAGLDPVDRKGYVFNPVSWQWRISDRDLSVNYV 240


>gi|167644913|ref|YP_001682576.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter sp. K31]
 gi|189037617|sp|B0SW81.1|UBIG_CAUSK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|167347343|gb|ABZ70078.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter sp. K31]
          Length = 252

 Score =  239 bits (611), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 119/248 (47%), Positives = 158/248 (63%), Gaps = 4/248 (1%)

Query: 100 SAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +APS S+  A++A+FSAIA  WWD  G + PLH  NP RL+FIR      F +D     P
Sbjct: 7   TAPSWSIDPADVARFSAIAAEWWDPRGKFAPLHVFNPCRLSFIREQALARFERDGNGRTP 66

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL ++D+GCGGG+LSEP+AR+G TVT +DA EKNIK A  HA    +   I Y   TA
Sbjct: 67  FEGLRLLDIGCGGGLLSEPMARLGFTVTAVDASEKNIKTAATHA--AEQGLEIGYRPATA 124

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+L+ E    FD V+  EV+EHVADP EF ++ + L    G  +++T+NR+++A A A I
Sbjct: 125 EQLLAEGAGPFDVVLTMEVVEHVADPGEFLRTCAKLLAPGGLMIVATLNRTLKALALAKI 184

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L W+P GTH W  FL P+EL   L    +DV    G  YNPLTGRWS S D  +N
Sbjct: 185 GAEYVLRWVPPGTHDWKQFLKPDELRAFLAGEPVDVHGPFGVAYNPLTGRWSRSADCDIN 244

Query: 338 FIAFGTKN 345
           ++   TK+
Sbjct: 245 YMMTVTKD 252


>gi|407799502|ref|ZP_11146395.1| 3-demethylubiquinone-9 3-methyltransferase [Oceaniovalibus
           guishaninsula JLT2003]
 gi|407058687|gb|EKE44630.1| 3-demethylubiquinone-9 3-methyltransferase [Oceaniovalibus
           guishaninsula JLT2003]
          Length = 246

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 164/243 (67%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+ KFSA+A  WWD +G +KPLH +NP RL +IR+ +   F +D  + RPF GL
Sbjct: 4   TTIDPAEIDKFSAMAAEWWDPQGKFKPLHMMNPCRLDYIRTQIAAEFDRDLTAPRPFAGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA E+NI +A++HA    +   I+Y  TTAE L 
Sbjct: 64  RILDIGCGGGLLSEPMARLGADVVGADAAERNIPVAQVHA--REQGLDIDYRHTTAEALA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHV+DP  +  +   L    G  V STINR+ R++A AI+ AE I
Sbjct: 122 EAGERFDIVLNMEVVEHVSDPQAYLTACHDLLKPGGFMVCSTINRNPRSFAYAILGAEWI 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH WS F+TP+EL  +++RA +   +  GFV++ +   WSLSD D++VN++  
Sbjct: 182 MRWLPKGTHDWSKFITPDELCAMIERAGLTPVDRTGFVFDFVRWSWSLSDRDLAVNYVTA 241

Query: 342 GTK 344
            T+
Sbjct: 242 STR 244


>gi|433773048|ref|YP_007303515.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium
           australicum WSM2073]
 gi|433665063|gb|AGB44139.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium
           australicum WSM2073]
          Length = 249

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 155/244 (63%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RL++IR  +   F +DP +ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDQIAARFGRDPRAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA E NI++A+LHA       +++Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGADASETNIEVAKLHA--AEGNVSVDYRATTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   KFD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE++
Sbjct: 125 EAGEKFDVILNMEVVEHVADIDLFVAKCGEMVKPGGIMFVATINRTLKALGLAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + PEEL   L+ A + + +  G  YNPL  RW+ S D+ VN++   
Sbjct: 185 LRWLPRGTHQFGKLVRPEELEKALRGAGLTIIDRTGVSYNPLADRWARSKDMDVNYMVLA 244

Query: 343 TKNS 346
            K S
Sbjct: 245 EKES 248


>gi|319781340|ref|YP_004140816.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317167228|gb|ADV10766.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 249

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 154/244 (63%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RLA+IR  +   F +DP +ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLAYIRDQIATRFGRDPRAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA E NI++A+LHA       +++Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGADASETNIEVAKLHA--AEGNVSVDYRATTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +   KFD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE++
Sbjct: 125 DAGEKFDVILNMEVVEHVADIDLFVAKCGEMVRPGGIMFVATINRTLKALGLAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + PEEL   L  A + + +  G  YNPL  RW+ S D+ VN++   
Sbjct: 185 LRWLPRGTHQFGKLVRPEELEKALAGAGLTIIDRTGVTYNPLADRWARSKDMDVNYMVLA 244

Query: 343 TKNS 346
            K S
Sbjct: 245 EKGS 248


>gi|23015689|ref|ZP_00055458.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
           methylase [Magnetospirillum magnetotacticum MS-1]
          Length = 244

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/238 (46%), Positives = 159/238 (66%), Gaps = 5/238 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F+A+A+ WWD  G +KPLH  NP RLAF+R     HF +D    RPFEGL+++DVG
Sbjct: 11  EIARFTAMAEAWWDPTGKFKPLHRFNPVRLAFMRRHFSAHFGRDESLMRPFEGLSLLDVG 70

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
            GGG+LSEPLARMG  VTGIDA EKN+ +ARLHA+   +T   ++Y   T E+L +    
Sbjct: 71  SGGGLLSEPLARMGFAVTGIDAGEKNVAVARLHAE---QTGVMVDYRVATPERL-DPAEA 126

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V++ EV+EHV D + F    +A     G  + +T+NR+ +A+A A++ AE++L WLP
Sbjct: 127 FDVVLSMEVVEHVPDVSAFLGHATAHLKPGGVFMGATLNRTAKAWALAVVGAEYVLGWLP 186

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           +GTH W+ F+ P E   +L+   I V++MAG  +NPL+  W  +D++ VN++ FG K 
Sbjct: 187 RGTHDWNKFVRPSEFAAMLRDHGITVRQMAGMAFNPLSDTWRETDNLDVNYMLFGVKG 244


>gi|89067459|ref|ZP_01154972.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola granulosus
           HTCC2516]
 gi|89047028|gb|EAR53082.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicola granulosus
           HTCC2516]
          Length = 248

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 113/247 (45%), Positives = 164/247 (66%), Gaps = 3/247 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A +++  AE+AKF A+A  WWD +G +KPLH LNP RL +I + +     +D  +A P
Sbjct: 2   QTATNTVDDAEIAKFEAMAAEWWDVDGKFKPLHMLNPCRLDYITAQIAAENGRDLTAAEP 61

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F GL ++D+GCGGG+L EP+AR+GA V G DA  +NI +AR+HA+       I+Y  TTA
Sbjct: 62  FAGLRLLDIGCGGGLLCEPMARLGAEVVGADAAPRNIPVARIHAE--QSGLEIDYRHTTA 119

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E + E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ 
Sbjct: 120 EAMAEAGEQFDVVLNMEVVEHVADPLGYLTACRELLKPGGLHICSTINRNPKSFAMAIVG 179

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE ++ WLPKGTH+W  F+TP+EL  +L++A ++  +  GFV+NPLT  W LSD D+SVN
Sbjct: 180 AEWVMRWLPKGTHEWEKFITPDELFELLRQAGLEPVDRKGFVFNPLTWSWRLSDRDLSVN 239

Query: 338 FIAFGTK 344
           ++   TK
Sbjct: 240 YVTASTK 246


>gi|408380664|ref|ZP_11178246.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           albertimagni AOL15]
 gi|407745440|gb|EKF56974.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           albertimagni AOL15]
          Length = 251

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 158/244 (64%), Gaps = 2/244 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A +++  +E+ +FSA+A  WWD  G +KPLH +NP RLA+IR  +  H+ +DP S RP E
Sbjct: 5   ARTTIDQSEVDRFSAMAAEWWDPTGKFKPLHKINPVRLAYIRDKVVEHYGRDPKSPRPLE 64

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL ++D+GCGGG+LSEP+ARMGA+V G DA EKNIKIA  H+        ++Y   TAE 
Sbjct: 65  GLRVLDIGCGGGLLSEPVARMGASVLGADASEKNIKIAMTHS--AQSGVDVDYRAVTAEA 122

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L  +   FD V+  EV+EHVAD   F  + +++    G  ++STINR+++A A AI+ AE
Sbjct: 123 LAAQVETFDIVLNMEVVEHVADVDFFLSTCASMVRPGGLMLVSTINRTLKAAALAIVGAE 182

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L WLP+GTHQ+   + PEE+   L    + + E  G  +NPL  +W+LS DI VN++ 
Sbjct: 183 YVLRWLPRGTHQYEKLVRPEEIERPLSANGMQILETKGVFFNPLQNQWNLSADIDVNYMM 242

Query: 341 FGTK 344
              +
Sbjct: 243 LARR 246


>gi|89052789|ref|YP_508240.1| 3-demethylubiquinone-9 3-methyltransferase [Jannaschia sp. CCS1]
 gi|109895672|sp|Q28VP7.1|UBIG_JANSC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|88862338|gb|ABD53215.1| 3-demethylubiquinone-9 3-methyltransferase [Jannaschia sp. CCS1]
          Length = 254

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/244 (45%), Positives = 161/244 (65%), Gaps = 3/244 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+AKF A+A  WWD EG +KPLH LNPTRL +I   +   F +D  +  PF GL
Sbjct: 12  NTVDAGEVAKFEAMAAEWWDLEGKFKPLHMLNPTRLDYITQQIAAEFGRDLKADAPFAGL 71

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +I+D+GCGGG+L+EP+AR+GA V G DA E+NI +A++HA        I+Y  TTAE + 
Sbjct: 72  HILDIGCGGGLLAEPMARLGADVVGADAAERNIPVAQVHAA--QSGLEIDYRHTTAEAMA 129

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +   +FD V+  EV+EHV DP  +  +   L    G  V ST+NR+ ++Y  AII AEH+
Sbjct: 130 DAGEQFDVVLNMEVVEHVVDPLGYLTACQRLLKPGGLMVCSTLNRNPKSYLMAIIGAEHV 189

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH+WS F+TP+EL  ++++A +D  +  GFV+NPL   W +S+ D+SVN++  
Sbjct: 190 MRWLPKGTHEWSKFITPDELFDLIRQAGLDPVDRKGFVFNPLLWTWGISERDMSVNYVTA 249

Query: 342 GTKN 345
             K 
Sbjct: 250 SVKQ 253


>gi|83942066|ref|ZP_00954528.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
           EE-36]
 gi|83847886|gb|EAP85761.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
           EE-36]
          Length = 248

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/241 (47%), Positives = 159/241 (65%), Gaps = 9/241 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+ KF A+A  WWD  G +KPLH LNP RL +I + +   F +D  S  PF GL
Sbjct: 6   STVDPAEIEKFQAMAAEWWDENGKFKPLHMLNPCRLDYITAQIAGEFDRDLKSPEPFRGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
            I+D+GCGGG+LSEP+AR+GATV G DA   NI +A++HA    LD     I+Y  TTAE
Sbjct: 66  RILDIGCGGGLLSEPMARLGATVVGADAAAGNIPVAQVHAQQSGLD-----IDYRHTTAE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   +FD V+  EV+EHVA P ++  +   L    G  + ST+NR+ +++  AI+ A
Sbjct: 121 ALAEAGEQFDVVLNMEVVEHVASPIDYLIACRTLLKPGGLHICSTLNRNPKSFMMAIVGA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           EH++ WLPKGTH+WS F+TP+EL  +L +A +   +  GFV+NP+T  W LSD D+SVN+
Sbjct: 181 EHVMRWLPKGTHEWSKFITPDELFDLLHKAGLTAVDRKGFVFNPITWSWRLSDRDLSVNY 240

Query: 339 I 339
           +
Sbjct: 241 V 241


>gi|83953115|ref|ZP_00961837.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842083|gb|EAP81251.1| 3-demethylubiquinone-9 3-methyltransferase [Sulfitobacter sp.
           NAS-14.1]
          Length = 248

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 157/238 (65%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+ KF A+A  WWD  G +KPLH LNP RL +I + +   F +D  S  PF GL
Sbjct: 6   STVDPAEIEKFQAMAAEWWDENGKFKPLHMLNPCRLDYITAQIAGEFDRDLKSPEPFRGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GATV G DA   NI +A++HA        I+Y  TTAE L 
Sbjct: 66  RILDIGCGGGLLSEPMARLGATVVGADAAAGNIPVAQVHAQ--QSGLEIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVA P ++  +   L    G  + ST+NR+ +++  AI+ AEH+
Sbjct: 124 EAGEQFDVVLNMEVVEHVASPIDYLIACRTLLKPGGLHICSTLNRNPKSFMMAIVGAEHV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH+WS F+TP+EL  +L +A +   +  GFV+NP+T  W LSD D+SVN++
Sbjct: 184 MRWLPKGTHEWSKFITPDELFDLLHKAGLTAVDRKGFVFNPITWSWRLSDRDLSVNYV 241


>gi|114799822|ref|YP_759346.1| ubiquinone biosynthesis O-methyltransferase [Hyphomonas neptunium
           ATCC 15444]
 gi|114739996|gb|ABI78121.1| ubiquinone biosynthesis O-methyltransferase [Hyphomonas neptunium
           ATCC 15444]
          Length = 258

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/237 (48%), Positives = 157/237 (66%), Gaps = 3/237 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  AE+AKFSA+A  WW+ +G +KPLH  NPTRL FIR T  RHF       RP +GL 
Sbjct: 16  SIDPAEVAKFSAMAADWWNPDGKFKPLHRFNPTRLKFIRETAERHFGLPLGELRPLKGLR 75

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGG++SEP+AR+GA VTG+DA E NIK A  HA    +   I+Y   TAE L+ 
Sbjct: 76  LLDIGCGGGLVSEPMARLGAAVTGVDASEANIKTALTHASQ--QGLNIDYRAGTAEGLLA 133

Query: 224 E-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
             +  FD V+  EV+EHVADPA+F    + L    G  +++T+N++ +A ATA+I AE+I
Sbjct: 134 SGEAAFDIVLNMEVVEHVADPAQFLMDTAQLVKPGGLMIVATLNKTAKALATAVIGAEYI 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP GTH WS FL PE++   L+ A ++     G  ++PL+G W LS+D SVN++
Sbjct: 194 LRWLPPGTHDWSKFLAPEDVTRPLESAGMETDTPIGVSFHPLSGAWKLSEDTSVNYM 250


>gi|452963300|gb|EME68376.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Magnetospirillum sp. SO-1]
          Length = 244

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 111/239 (46%), Positives = 158/239 (66%), Gaps = 9/239 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F+A+A+ WWD  G +KPLH  NP RLAF+R     HF +D    RPFEGL ++DVG
Sbjct: 11  EIARFTAMAEAWWDPTGKFKPLHRFNPVRLAFMRRHFAAHFGRDDSLLRPFEGLTLLDVG 70

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEKLVEEQ 225
            GGG+LSEPLARMG  VTGIDA ++N+ +ARLHA+   LD     ++Y   T E++ +  
Sbjct: 71  SGGGLLSEPLARMGFAVTGIDAGDRNVAVARLHAEQSGLD-----VDYRVATPEQM-DPA 124

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V++ EV+EHV D A F    +A     G  + +T+NR+ +A+A A++ AE++L W
Sbjct: 125 ESFDVVLSMEVVEHVPDVAAFLGHATARLKPGGVFMGATLNRTAKAWALAVVGAEYVLGW 184

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           LPKGTH W+ F+ P E   +L+   I V++MAG  YNPL   W  ++++ VN++ FGTK
Sbjct: 185 LPKGTHDWNKFVRPSEFAAMLRDHGITVRKMAGMAYNPLADSWRETENLDVNYMLFGTK 243


>gi|414175686|ref|ZP_11430090.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia broomeae ATCC
           49717]
 gi|410889515|gb|EKS37318.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia broomeae ATCC
           49717]
          Length = 249

 Score =  238 bits (608), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/240 (45%), Positives = 157/240 (65%), Gaps = 3/240 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+A+FS +++ WWD +G   PLH +NP RLA+IR   CR F ++P S     GL
Sbjct: 9   STVDPGEVARFSELSEQWWDPKGKMAPLHKINPLRLAYIRDAACRKFDRNPKSLNCLSGL 68

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCG G+L EPL R+GA V G+D    NI +A+LHA+      +I+Y CTT E++ 
Sbjct: 69  RILDIGCGAGLLCEPLTRLGAQVIGVDPSATNIAVAKLHAERG--HLSIDYRCTTIEEM- 125

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHVA+   F    +AL       V+STINR+ +++A AI+ AE+I
Sbjct: 126 DPRERFDIVLAMEVVEHVANVGMFLDRCAALLKPTSMMVVSTINRTWKSFALAIVGAEYI 185

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQW  F+TP EL   L+R  + + + AG VYNPL  RWSLS D+ VN++   
Sbjct: 186 LRWLPRGTHQWDKFVTPAELTHHLERNKLAISDQAGVVYNPLADRWSLSSDMDVNYMVIA 245


>gi|86136803|ref|ZP_01055381.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp. MED193]
 gi|85826127|gb|EAQ46324.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp. MED193]
          Length = 248

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 112/244 (45%), Positives = 162/244 (66%), Gaps = 5/244 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD  G +KPLH LNP RL +I S +   F +D     PF+GL
Sbjct: 6   STVDPAEIAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITSQIAAEFDRDLTQPEPFKGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKL 221
            ++D+GCGGG+L EP++R+GA VTG DA   N+ +ARLHA+   +T  TI+Y  TTAE +
Sbjct: 66  RLLDIGCGGGLLCEPMSRLGAEVTGADAAAGNLPVARLHAE---QTGLTIDYRHTTAEDM 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
                +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AI  AE 
Sbjct: 123 AAAGEQFDVVLNMEVVEHVADPLSYLTATRQLLKPGGLEICSTINRNPKSYAMAIFGAEV 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           ++ WLP+GTH+W+ F+TP+EL  +L +A +   +  GFV+NP++ +WS+SD D+SVN++ 
Sbjct: 183 VMRWLPRGTHEWNKFITPDELFDLLSKAGLTPVDRKGFVFNPISWKWSISDRDLSVNYVT 242

Query: 341 FGTK 344
              K
Sbjct: 243 ASIK 246


>gi|254512004|ref|ZP_05124071.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
           bacterium KLH11]
 gi|221535715|gb|EEE38703.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhodobacteraceae
           bacterium KLH11]
          Length = 248

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 111/244 (45%), Positives = 161/244 (65%), Gaps = 3/244 (1%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P+++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  +A PF G
Sbjct: 5   PNTVDPSEIAKFEAMAAEWWDPHGKFKPLHMLNPCRLDYITQQIAGEFDRDLKAANPFAG 64

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
           L ++D+GCGGG+LSEP+AR+GA V G DA E N+ +AR+HA  +     I+Y  TTAE +
Sbjct: 65  LRLLDIGCGGGLLSEPMARLGAEVVGADAAEGNLPVARIHA--EQSGLDIDYRHTTAEDI 122

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
                +FD V+  EV+EHVADP  F  +   L    G  + STINR+ ++YA AI  AE 
Sbjct: 123 AAAGEQFDVVLNMEVVEHVADPLGFLTASQQLLKPGGLLLCSTINRNPKSYAMAIFGAEV 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           ++ WLP+GTH+W+ F+TP+EL  +L++A ++  +  GFV+NP+   WS+SD D+SVN++ 
Sbjct: 183 VMRWLPRGTHEWNKFITPDELFDLLRQAGLEPVDRKGFVFNPILWNWSISDRDLSVNYVT 242

Query: 341 FGTK 344
              K
Sbjct: 243 ASVK 246


>gi|340027946|ref|ZP_08664009.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Paracoccus sp.
           TRP]
          Length = 253

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 118/241 (48%), Positives = 162/241 (67%), Gaps = 3/241 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +APSS+  AE+AKF A+A  WWD +G +KPLH LNPTRL ++ + +   F +D   A PF
Sbjct: 8   AAPSSIDPAEVAKFQAMAREWWDPQGKFKPLHMLNPTRLEYVTTQIAAQFGRDLTGAMPF 67

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
             L I+D+GCGGG+++EP+AR+GA VTG DA E NI IA LHA  + +   I+Y  TTAE
Sbjct: 68  RDLAILDIGCGGGLMAEPMARLGALVTGADAAEGNIAIASLHA--EEQGLPIDYRATTAE 125

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L  E  +FD V+A E++EHVADPA+F  +   L    G  ++ST+NR+ R++A AI+ A
Sbjct: 126 ALAAEGLRFDVVMALEIVEHVADPAQFIATCRDLVAPGGMLIVSTLNRTARSFAAAIVGA 185

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           E I+ WLPKGTH W  F+TP EL  + +   + V +  G V+NPL   WSLS  D+SVN+
Sbjct: 186 EWIMRWLPKGTHDWRRFITPGELAQMTEITGLSVVDRCGMVFNPLGWSWSLSHRDLSVNY 245

Query: 339 I 339
           +
Sbjct: 246 V 246


>gi|16125093|ref|NP_419657.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
           CB15]
 gi|221233820|ref|YP_002516256.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
           NA1000]
 gi|17368664|sp|Q9A9X1.1|UBIG_CAUCR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|254789986|sp|B8H209.1|UBIG_CAUCN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|13422093|gb|AAK22825.1| 3-demethylubiquinone-9 3-methyltransferase [Caulobacter crescentus
           CB15]
 gi|220962992|gb|ACL94348.1| 3-demethylubiquinone 3-methyltransferase [Caulobacter crescentus
           NA1000]
          Length = 252

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 120/248 (48%), Positives = 158/248 (63%), Gaps = 4/248 (1%)

Query: 100 SAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +APS S+  A++A+FSAIA  WWD +G + PLH  NP RLAFIR      F +D  +  P
Sbjct: 7   AAPSWSIDPADVARFSAIAAEWWDPKGKFAPLHVFNPCRLAFIREQALARFDRDGAARAP 66

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL ++D+GCGGG+LSEP+AR+G  VT IDA EKNIK A  HA    +   I Y   TA
Sbjct: 67  FEGLTLLDIGCGGGLLSEPMARLGFAVTAIDASEKNIKTAATHA--AEQGLDIGYRPATA 124

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+L+ E    FD V+  EVIEHVADP EF ++ + L    G   ++T+NR+++A A A I
Sbjct: 125 EQLLAEGAGPFDVVLTMEVIEHVADPGEFLRTCAKLLKPGGIMFVATLNRTLKALALAKI 184

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L W+P GTH W  FL PEEL   L    + ++   G  YNPLTGRWS S D  +N
Sbjct: 185 GAEYVLRWVPPGTHDWKQFLKPEELRAFLAGEPVAMQGPFGVAYNPLTGRWSRSSDTDIN 244

Query: 338 FIAFGTKN 345
           ++   TK+
Sbjct: 245 YMMTVTKD 252


>gi|126734446|ref|ZP_01750193.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp. CCS2]
 gi|126717312|gb|EBA14176.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp. CCS2]
          Length = 249

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/248 (44%), Positives = 165/248 (66%), Gaps = 3/248 (1%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           K SA +++  +E+AKF A+A  WWD  G +KPLH +NP RL +I S +   + +D     
Sbjct: 2   KMSATNTVDPSEIAKFEAMAAEWWDLNGKFKPLHMMNPVRLDYITSQIAAEYGRDLSQPE 61

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           PF+GL I+D+GCGGG+L EP+AR+GAT+ G DA E+NI +A++HA  +     I+Y  TT
Sbjct: 62  PFKGLRILDIGCGGGLLCEPMARLGATIVGADAAERNIPVAKIHA--EQSGLEIDYRHTT 119

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE +     +FDAV+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+
Sbjct: 120 AEAMAAAGEQFDAVLNMEVVEHVADPQGYLDACQQLMKPGGIHICSTINRNPKSFAMAIV 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE+++ WLPKGTH+W+ F+TP+EL   L++A +   +  GF+++  T  WS+SD D+SV
Sbjct: 180 GAEYVMRWLPKGTHEWNKFITPDELYGFLEKAGMKPVDRKGFIFSFTTFTWSISDRDLSV 239

Query: 337 NFIAFGTK 344
           N++   TK
Sbjct: 240 NYVTAATK 247


>gi|23502725|ref|NP_698852.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis 1330]
 gi|82700645|ref|YP_415219.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis
           biovar Abortus 2308]
 gi|148560304|ref|YP_001259700.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ovis ATCC
           25840]
 gi|161619790|ref|YP_001593677.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella canis ATCC
           23365]
 gi|163843898|ref|YP_001628302.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis ATCC
           23445]
 gi|189024943|ref|YP_001935711.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus S19]
 gi|225628076|ref|ZP_03786111.1| ubiquinone biosynthesis O-methyltransferase [Brucella ceti str.
           Cudo]
 gi|237816238|ref|ZP_04595231.1| ubiquinone biosynthesis O-methyltransferase [Brucella abortus str.
           2308 A]
 gi|256370272|ref|YP_003107783.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella microti CCM
           4915]
 gi|260545995|ref|ZP_05821735.1| SAM binding domain-containing protein [Brucella abortus NCTC 8038]
 gi|260567636|ref|ZP_05838106.1| SAM binding domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|260755556|ref|ZP_05867904.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260758779|ref|ZP_05871127.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260760503|ref|ZP_05872846.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260884580|ref|ZP_05896194.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|261214827|ref|ZP_05929108.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|261217704|ref|ZP_05931985.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti M13/05/1]
 gi|261220929|ref|ZP_05935210.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti B1/94]
 gi|261315082|ref|ZP_05954279.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261316361|ref|ZP_05955558.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261321449|ref|ZP_05960646.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti
           M644/93/1]
 gi|261323822|ref|ZP_05963019.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella neotomae 5K33]
 gi|261751023|ref|ZP_05994732.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella suis bv. 5
           str. 513]
 gi|261755584|ref|ZP_05999293.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis bv. 3
           str. 686]
 gi|261758816|ref|ZP_06002525.1| SAM binding domain-containing protein [Brucella sp. F5/99]
 gi|265987433|ref|ZP_06099990.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|265996889|ref|ZP_06109446.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti
           M490/95/1]
 gi|294851115|ref|ZP_06791788.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297247119|ref|ZP_06930837.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella abortus bv.
           5 str. B3196]
 gi|340791463|ref|YP_004756928.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|376275532|ref|YP_005115971.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella canis HSK
           A52141]
 gi|376281520|ref|YP_005155526.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis VBI22]
 gi|384225512|ref|YP_005616676.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis 1330]
 gi|423168148|ref|ZP_17154851.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI435a]
 gi|423169476|ref|ZP_17156151.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI474]
 gi|423175534|ref|ZP_17162203.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI486]
 gi|423177616|ref|ZP_17164261.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI488]
 gi|423178909|ref|ZP_17165550.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI010]
 gi|423182040|ref|ZP_17168677.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI016]
 gi|423187018|ref|ZP_17173632.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI021]
 gi|38258792|sp|Q8FYK0.1|UBIG_BRUSU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|109895665|sp|Q2YLN5.1|UBIG_BRUA2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|166234762|sp|A5VSK3.1|UBIG_BRUO2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189037615|sp|A9M8K8.1|UBIG_BRUC2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189037616|sp|B0CIC6.1|UBIG_BRUSI RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725531|sp|B2S828.1|UBIG_BRUA1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|23348741|gb|AAN30767.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis 1330]
 gi|82616746|emb|CAJ11831.1| SAM (and some other nucleotide) binding motif:Generic
           methyltransferase [Brucella melitensis biovar Abortus
           2308]
 gi|148371561|gb|ABQ61540.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella ovis ATCC
           25840]
 gi|161336601|gb|ABX62906.1| ubiquinone biosynthesis O-methyltransferase [Brucella canis ATCC
           23365]
 gi|163674621|gb|ABY38732.1| ubiquinone biosynthesis O-methyltransferase [Brucella suis ATCC
           23445]
 gi|189020515|gb|ACD73237.1| SAM (and some other nucleotide) binding motif [Brucella abortus
           S19]
 gi|225616901|gb|EEH13948.1| ubiquinone biosynthesis O-methyltransferase [Brucella ceti str.
           Cudo]
 gi|237788305|gb|EEP62520.1| ubiquinone biosynthesis O-methyltransferase [Brucella abortus str.
           2308 A]
 gi|256000435|gb|ACU48834.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella microti CCM
           4915]
 gi|260096102|gb|EEW79978.1| SAM binding domain-containing protein [Brucella abortus NCTC 8038]
 gi|260157154|gb|EEW92234.1| SAM binding domain-containing protein [Brucella suis bv. 4 str. 40]
 gi|260669097|gb|EEX56037.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260670935|gb|EEX57756.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260675664|gb|EEX62485.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260874108|gb|EEX81177.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|260916434|gb|EEX83295.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|260919513|gb|EEX86166.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti B1/94]
 gi|260922793|gb|EEX89361.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti M13/05/1]
 gi|261294139|gb|EEX97635.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti
           M644/93/1]
 gi|261295584|gb|EEX99080.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261299802|gb|EEY03299.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella neotomae 5K33]
 gi|261304108|gb|EEY07605.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261738800|gb|EEY26796.1| SAM binding domain-containing protein [Brucella sp. F5/99]
 gi|261740776|gb|EEY28702.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella suis bv. 5
           str. 513]
 gi|261745337|gb|EEY33263.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis bv. 3
           str. 686]
 gi|262551357|gb|EEZ07347.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella ceti
           M490/95/1]
 gi|264659630|gb|EEZ29891.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|294819704|gb|EFG36703.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297174288|gb|EFH33635.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella abortus bv.
           5 str. B3196]
 gi|340559922|gb|AEK55160.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|343383692|gb|AEM19184.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis 1330]
 gi|358259119|gb|AEU06854.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella suis VBI22]
 gi|363404099|gb|AEW14394.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brucella canis HSK
           A52141]
 gi|374535978|gb|EHR07499.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI486]
 gi|374539897|gb|EHR11400.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI435a]
 gi|374543155|gb|EHR14638.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI474]
 gi|374549204|gb|EHR20648.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI488]
 gi|374551853|gb|EHR23282.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI016]
 gi|374552225|gb|EHR23653.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI010]
 gi|374557730|gb|EHR29126.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI021]
          Length = 248

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 157/245 (64%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA     +  I+Y  TTAE
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHA--AQSSLDIDYRATTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII A
Sbjct: 122 ALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|265982885|ref|ZP_06095620.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella sp. 83/13]
 gi|306838258|ref|ZP_07471108.1| ubiquinone biosynthesis O-methyltransferase [Brucella sp. NF 2653]
 gi|264661477|gb|EEZ31738.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella sp. 83/13]
 gi|306406661|gb|EFM62890.1| ubiquinone biosynthesis O-methyltransferase [Brucella sp. NF 2653]
          Length = 248

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 109/248 (43%), Positives = 158/248 (63%), Gaps = 8/248 (3%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCT 216
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA    LD     I+Y  T
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHAAQSGLD-----IDYRAT 118

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           TAE L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AI
Sbjct: 119 TAEALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAI 178

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ V
Sbjct: 179 IGAEYVLRWLPRGTHQYEKLVRPEELEAAFSKAGLRLIDKLGVTYNPLADSWNRSRDMDV 238

Query: 337 NFIAFGTK 344
           N++    +
Sbjct: 239 NYMVLAER 246


>gi|395766994|ref|ZP_10447532.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella doshiae NCTC
           12862]
 gi|395415606|gb|EJF82040.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella doshiae NCTC
           12862]
          Length = 248

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 157/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP S  PFE L
Sbjct: 7   TTIDQSEIDHFSRIAAEWWNPQGKFRPLHQFNPTRLAYIKEKICLAFDRDPVSLLPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA       +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVVGADAAQTNIEVAKIHA--IQSGVSIDYRNTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E  +FD ++  EV+EHVAD      + + +   +G   +ST+NR+ +A+  AII AE+I
Sbjct: 125 DEGEQFDIILNMEVVEHVADVRLLIAATAKMLKPQGLMFVSTLNRTWKAWGLAIIGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           LHWLPKGTH +  FL P EL   L + ++ V +  G +YNPL   W+ S D+ VN++   
Sbjct: 185 LHWLPKGTHNYKKFLKPHELKSFLSQNALTVIDEIGIIYNPLKNSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|423190546|ref|ZP_17177154.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI259]
 gi|374554316|gb|EHR25727.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella abortus bv. 1
           str. NI259]
          Length = 248

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 157/245 (64%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA     +  I+Y  TTAE
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHA--AQSSLDIDYRATTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +   KFD V+  EV+EH++D   F  + SA+    G   ++TINR+++AY  AII A
Sbjct: 122 ALADAGEKFDVVLNMEVVEHISDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|121602909|ref|YP_988688.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           bacilliformis KC583]
 gi|421760497|ref|ZP_16197313.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bartonella
           bacilliformis INS]
 gi|166234760|sp|A1URT5.1|UBIG_BARBK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120615086|gb|ABM45687.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           bacilliformis KC583]
 gi|411174914|gb|EKS44941.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bartonella
           bacilliformis INS]
          Length = 248

 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 157/237 (66%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP+S  PF GL
Sbjct: 7   TTVDQSEIDHFSRIAAEWWNPQGKFRPLHKFNPTRLAYIKEKICLAFDRDPFSLAPFAGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+ R+GATV G DA + NI++A++HA       +I+Y  TTAEKL 
Sbjct: 67  KILDIGCGGGLLCEPMVRLGATVIGADAAQNNIEVAKIHA--TQSGLSIDYRATTAEKLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++  KFD ++  E++EHVAD   F  + + +   +G   I+T+NR+ +++  AI+ AE+I
Sbjct: 125 DKGEKFDIILNMEIVEHVADVDLFISATAKMLKPQGLMFIATLNRTWKSWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLPKGTH +  FL P+EL  +L   S+ V +  G  YNPL   W+ S D+ VN++
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKKLLLTNSLKVIDELGITYNPLNDSWNRSKDMDVNYM 241


>gi|260576183|ref|ZP_05844176.1| ubiquinone biosynthesis O-methyltransferase [Rhodobacter sp. SW2]
 gi|259021663|gb|EEW24966.1| ubiquinone biosynthesis O-methyltransferase [Rhodobacter sp. SW2]
          Length = 247

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 113/246 (45%), Positives = 164/246 (66%), Gaps = 9/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+AKF A+A  WW+  G +KPLH +NP RL +I S +   F +D  + +PF GL
Sbjct: 5   TTIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPVRLDYITSQIAAEFDRDLTAHQPFAGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
            I+D+GCGGG+LSEP+AR+GATV G DA  +NI +A+LHA+   LD     I+Y  TTAE
Sbjct: 65  RILDIGCGGGLLSEPMARLGATVVGADAAPRNIPVAQLHAEQMGLD-----IDYRNTTAE 119

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L     +FD V+  EV+EHV+DP  +  +  AL  + G  + ST+NR+ +++A AI+ A
Sbjct: 120 ALAAAGEQFDVVLNMEVVEHVSDPLAYLTACQALLKTGGLMLCSTLNRNPKSFAMAIVGA 179

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           E ++ WLPKGTH W  F+TP+EL  +++RA +D  +  G V+NP+T  WSLS  D+SVN+
Sbjct: 180 EWVMGWLPKGTHDWRKFITPDELQDLIRRAGLDPVDRKGMVFNPVTWSWSLSPRDLSVNY 239

Query: 339 IAFGTK 344
           +    K
Sbjct: 240 VTASVK 245


>gi|13472976|ref|NP_104543.1| 3-demethylubiquinone-9 3-methyltransferase [Mesorhizobium loti
           MAFF303099]
 gi|17368584|sp|Q98G87.1|UBIG_RHILO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|14023724|dbj|BAB50329.1| 3-demethylubiquinone-9 3-methyltransferase [Mesorhizobium loti
           MAFF303099]
          Length = 249

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 153/244 (62%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RL++IR  +   F +DP +ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDQIAARFGRDPRAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA E NI++A+LHA        ++Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGADASETNIEVAKLHA--AEGNVIVDYRATTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +    FD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE++
Sbjct: 125 DAGETFDVILNMEVVEHVADIDLFVAKCGQMVRPGGIMFVATINRTLKALGLAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + PEEL   L  AS+ + +  G  YNPL  RW+ S D+ VN++   
Sbjct: 185 LRWLPRGTHQFGKLVRPEELEKALGGASLTIIDRTGVTYNPLADRWARSKDMDVNYMVLA 244

Query: 343 TKNS 346
            K S
Sbjct: 245 EKGS 248


>gi|49475201|ref|YP_033242.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella henselae
           str. Houston-1]
 gi|57013201|sp|Q6G5K3.1|UBIG_BARHE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|49238006|emb|CAF27211.1| 3-demethylubiquinone-93-methyltransferase [Bartonella henselae str.
           Houston-1]
          Length = 247

 Score =  236 bits (603), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 108/242 (44%), Positives = 157/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           ++L  +E+  FS IA  WW+  G ++PLH  NPTRLA+IR  +C    +DP S +PFE L
Sbjct: 7   TTLDQSEVDHFSRIAAEWWNPHGKFRPLHQFNPTRLAYIREKICLELHRDPVSLKPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA + NI++A++HA  +    +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGAMVVGADASQTNIEVAKIHAAQN--GLSIDYRTTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD ++  EV+EHVAD   F ++ + +   +G   IST+NR+ +A+  AII AE+I
Sbjct: 125 TEGEQFDIILNMEVVEHVADVNLFIEATAKMLKPQGLMFISTLNRTWKAWGLAIIGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P EL  +L + ++ V +  G  YNPL   W+ S D++VN++   
Sbjct: 185 LRWLPKGTHNYKKFLKPRELKNLLLQNALTVVDEIGVTYNPLNDSWNRSKDMNVNYLLLA 244

Query: 343 TK 344
            K
Sbjct: 245 KK 246


>gi|440799191|gb|ELR20252.1| ubiquinone biosynthesis Omethyltransferase [Acanthamoeba
           castellanii str. Neff]
          Length = 275

 Score =  236 bits (603), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 156/243 (64%), Gaps = 1/243 (0%)

Query: 103 SSLKHAELAKFSAIADT-WWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           S++   E+ + S  A   WWD EG  KPLH +NP R+A++R+ L +     P + +PF G
Sbjct: 29  STVDEEEVQRLSESARLRWWDPEGEMKPLHRMNPKRVAYLRTCLTKRLGLPPLAPQPFTG 88

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
           L  +DVGCG G+L+E LAR+G  V G+DA   NI+ A  H+  D   ST+ Y   TAE L
Sbjct: 89  LRFLDVGCGPGLLTESLARLGGEVLGVDASAANIQTAIKHSSGDSSLSTLAYRHGTAEGL 148

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E ++FD V + EVIEHV +P  F  SLS L    G+  +STINR+M++YA AI+ AE+
Sbjct: 149 AAEGQQFDVVSSLEVIEHVNNPELFINSLSGLVKPGGSLFLSTINRTMKSYALAIVGAEY 208

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           IL W+P GTHQW+ F+ P EL ++LQRA ++++E+ G  Y P  G WS + D SVN++ +
Sbjct: 209 ILGWVPPGTHQWNKFVQPTELGVLLQRAGMNLEELTGLAYQPWNGSWSFTTDTSVNYLLW 268

Query: 342 GTK 344
            TK
Sbjct: 269 ATK 271


>gi|126738459|ref|ZP_01754164.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp.
           SK209-2-6]
 gi|126720258|gb|EBA16964.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter sp.
           SK209-2-6]
          Length = 261

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/262 (43%), Positives = 166/262 (63%), Gaps = 6/262 (2%)

Query: 86  TAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL 145
           T E+H++       +  S++  +E+AKF A+A  WWD +G +KPLH LNP RL +I   +
Sbjct: 5   TTEDHTE---TGMQAPQSTVDPSEIAKFEAMAAEWWDPKGKFKPLHMLNPCRLDYITRQI 61

Query: 146 CRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD 205
              F +D     PF+GL ++D+GCGGG+L EP+AR+GA VTG DA   N+ +A+LHA+  
Sbjct: 62  AAEFHRDLTQPEPFKGLRLLDIGCGGGLLCEPMARLGADVTGADAAAGNLPVAQLHAE-- 119

Query: 206 PETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTI 265
                I+Y  TTAE +     +FD V+  EV+EHVADP  +  +   L    G  + STI
Sbjct: 120 QSGLKIDYRHTTAEDMAAAGEQFDVVLNMEVVEHVADPLSYLTATYDLLKPGGLEICSTI 179

Query: 266 NRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLT 325
           NR+ ++YA AI  AE I+ WLP+GTH+W  F+TP+ELV +L +A +   +  GFV+NP++
Sbjct: 180 NRNPKSYAMAIFGAEVIMRWLPRGTHEWHKFITPDELVELLSKAGLTPVDRKGFVFNPIS 239

Query: 326 GRWSLSD-DISVNFIAFGTKNS 346
             WS+SD D+SVN++    K S
Sbjct: 240 WNWSISDRDLSVNYVTSSIKKS 261


>gi|306842973|ref|ZP_07475607.1| ubiquinone biosynthesis O-methyltransferase [Brucella sp. BO2]
 gi|306286901|gb|EFM58426.1| ubiquinone biosynthesis O-methyltransferase [Brucella sp. BO2]
          Length = 248

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/248 (43%), Positives = 158/248 (63%), Gaps = 8/248 (3%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCT 216
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA    LD     I+Y  T
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHAAQSGLD-----IDYRAT 118

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           TAE L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AI
Sbjct: 119 TAEALADAGEKFDVVLNMEVVEHVSDVDLFMSTTSAMVKPGGLMFVATINRTLKAYGLAI 178

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE++L WLP+GTHQ+   + P+EL     +A + + +  G  YNPL   W+ S D+ V
Sbjct: 179 IGAEYVLRWLPRGTHQYEKLVRPQELEAAFSKAGLRLIDKLGVTYNPLADSWNRSRDMDV 238

Query: 337 NFIAFGTK 344
           N++    +
Sbjct: 239 NYMVLAER 246


>gi|254293172|ref|YP_003059195.1| ubiquinone biosynthesis O-methyltransferase [Hirschia baltica ATCC
           49814]
 gi|254041703|gb|ACT58498.1| ubiquinone biosynthesis O-methyltransferase [Hirschia baltica ATCC
           49814]
          Length = 248

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 113/244 (46%), Positives = 157/244 (64%), Gaps = 5/244 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+ KF A+A  WWD +G +KPLH  NP RLAF+R  +  HF  +  S  P EGL 
Sbjct: 7   SIDENEIEKFRAMASEWWDPKGKFKPLHKFNPVRLAFLRDKIVSHFNLNNTSHTPLEGLR 66

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLV 222
           I+D+GCGGG++SEP+AR+GA +T +DA E NIK A  HA    ET   I+Y   T E+L+
Sbjct: 67  ILDIGCGGGLVSEPIARLGAKMTSVDAGEANIKTAMTHAQ---ETGVKIDYRVGTVEELI 123

Query: 223 EE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E  +  FD V+  EVIEHVADP +F K  ++L    G   +++INR+ +A+A AI+ AE+
Sbjct: 124 ENGEPPFDVVLNLEVIEHVADPHQFIKDTASLVKPGGMIFVASINRTSKAFALAIVGAEY 183

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           I+ WLPKGTH++   + P E    L+   I ++E  G  YNPL+G WSLS D  VN++  
Sbjct: 184 IMGWLPKGTHEFHKLVKPTEAKQALKAGGISIQETTGVSYNPLSGEWSLSSDTMVNYMCV 243

Query: 342 GTKN 345
           GT++
Sbjct: 244 GTRS 247


>gi|359789181|ref|ZP_09292136.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mesorhizobium
           alhagi CCNWXJ12-2]
 gi|359254978|gb|EHK57934.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mesorhizobium
           alhagi CCNWXJ12-2]
          Length = 250

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 153/242 (63%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RLA+IR  +   F +DP++ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLAYIRDQIAARFGRDPHAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA E N+++ARLHA        ++Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGADASETNVEVARLHA--AEAGVVVDYRATTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +   KFD ++  EV+EHVAD   F    +     +G   ++TINR+++A   AI+ AE++
Sbjct: 125 DAGEKFDVILNMEVVEHVADIDLFIGKCADTVKPDGIMFVATINRTLKALGLAIVGAEYL 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + PEEL   L  A + + +  G +YN L  RW  S D+ VN++   
Sbjct: 185 LRWLPRGTHQYGRLVRPEELERALSNAGMTITDRTGVIYNLLADRWQRSRDMDVNYMVLA 244

Query: 343 TK 344
            K
Sbjct: 245 EK 246


>gi|306844845|ref|ZP_07477428.1| ubiquinone biosynthesis O-methyltransferase [Brucella inopinata
           BO1]
 gi|306274777|gb|EFM56558.1| ubiquinone biosynthesis O-methyltransferase [Brucella inopinata
           BO1]
          Length = 248

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 108/248 (43%), Positives = 158/248 (63%), Gaps = 8/248 (3%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCT 216
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA    LD     I+Y  T
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHAAQSGLD-----IDYRAT 118

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           TAE L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AI
Sbjct: 119 TAEALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAI 178

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE++L WLP+GTHQ+   + P+EL     +A + + +  G  YNPL   W+ S D+ V
Sbjct: 179 IGAEYVLRWLPRGTHQYEKLVRPQELEAAFSKAGLRLIDKLGVTYNPLADSWNRSRDMDV 238

Query: 337 NFIAFGTK 344
           N++    +
Sbjct: 239 NYMVLAER 246


>gi|17986472|ref|NP_539106.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis bv.
           1 str. 16M]
 gi|225853311|ref|YP_002733544.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis
           ATCC 23457]
 gi|256263201|ref|ZP_05465733.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|260562793|ref|ZP_05833279.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 1 str. 16M]
 gi|265991906|ref|ZP_06104463.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|384212223|ref|YP_005601307.1| ubiquinone biosynthesis O-methyltransferase [Brucella melitensis
           M5-90]
 gi|384409328|ref|YP_005597949.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis
           M28]
 gi|384445869|ref|YP_005604588.1| ubiquinone biosynthesis O-methyltransferase [Brucella melitensis
           NI]
 gi|21363055|sp|Q8YJ98.1|UBIG_BRUME RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|254789985|sp|C0RFB8.1|UBIG_BRUMB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|17982070|gb|AAL51370.1| hexaprenyldihydroxybenzoate methyltransferase precursor [Brucella
           melitensis bv. 1 str. 16M]
 gi|225641676|gb|ACO01590.1| ubiquinone biosynthesis O-methyltransferase [Brucella melitensis
           ATCC 23457]
 gi|260152809|gb|EEW87901.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 1 str. 16M]
 gi|263002972|gb|EEZ15265.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263093123|gb|EEZ17258.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|326409875|gb|ADZ66940.1| 3-demethylubiquinone-9 3-methyltransferase [Brucella melitensis
           M28]
 gi|326539588|gb|ADZ87803.1| ubiquinone biosynthesis O-methyltransferase [Brucella melitensis
           M5-90]
 gi|349743858|gb|AEQ09401.1| ubiquinone biosynthesis O-methyltransferase [Brucella melitensis
           NI]
          Length = 248

 Score =  236 bits (601), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 156/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA     +  I+Y  TT E
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHA--AQSSLDIDYRATTTE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII A
Sbjct: 122 ALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|338741712|ref|YP_004678674.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium sp.
           MC1]
 gi|337762275|emb|CCB68110.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium sp.
           MC1]
          Length = 255

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/236 (46%), Positives = 148/236 (62%), Gaps = 2/236 (0%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           +L   E+ +FS +A  WWD  G ++PLH + P RL+FIR +    F +DP + RP  GL 
Sbjct: 13  TLDTEEVERFSRMATEWWDPRGKFRPLHQIGPPRLSFIRDSAVERFGRDPKALRPLTGLT 72

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
            VD+GCGGG+++EPLARMGATVT ID  EKNI IA+ HA+   +   I+Y     E LV 
Sbjct: 73  AVDIGCGGGLVAEPLARMGATVTAIDPSEKNIAIAKSHAE--GQGIAIDYRAVRVEDLVA 130

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           E R FD V   EV+EHV DPA+F     +L    G  V ST+NR+ +A+A AI+ AE++L
Sbjct: 131 EGRTFDIVTCLEVVEHVPDPAKFIGECVSLVAPGGLGVFSTMNRTFKAWALAIVGAEYVL 190

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            WLP+GTHQW  F+TP EL   ++ A +D     G  YNPL   WS + +  VN++
Sbjct: 191 GWLPRGTHQWDRFITPAELAGYVKAAGLDDVRFEGITYNPLQDSWSRNPNTDVNYL 246


>gi|319404565|emb|CBI78171.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella rochalimae
           ATCC BAA-1498]
          Length = 247

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/246 (43%), Positives = 158/246 (64%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +  P+++   E+  FS IA  WWD +G ++ LH  NPTRLA+I+  +C  F ++P S  P
Sbjct: 3   NETPTTIDQNEIDHFSRIAAEWWDPQGKFRSLHNFNPTRLAYIKEKICLAFNRNPVSLTP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA       +I Y  TTA
Sbjct: 63  FEGLKILDIGCGGGLLCEPMARLGATVIGADAAQTNIEVAKIHA--IQSGLSINYRTTTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L  E  +FD ++  EV+EHV +   F ++ + +   +G   I+T+NR+ +A+  AI+A
Sbjct: 121 EALANEGEQFDVILNMEVVEHVVNVDFFIEATAKMLKPQGLMFIATLNRTWKAWGLAIVA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLPKGTH +  FL P EL  IL + S+ + +  G  YNPLT  W+ S D+ VN+
Sbjct: 181 AEYILKWLPKGTHDYKKFLKPHELKKILCKNSLSIIDEIGITYNPLTDSWNRSCDMDVNY 240

Query: 339 IAFGTK 344
           I    +
Sbjct: 241 ILLAKR 246


>gi|430005306|emb|CCF21107.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhizobium sp.]
          Length = 248

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 159/246 (64%), Gaps = 4/246 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G +KPLH  NP RL +IR  +  +F +DP +  P 
Sbjct: 4   AAKTTIDQSEVDRFSAMAAEWWDPTGKFKPLHKFNPVRLTYIRDRVSENFGRDPKAHLPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            GL ++D+GCGGG+LSEP+ARMGATV G D  EKNI+IA+ HA    ET   I+Y   TA
Sbjct: 64  SGLRVLDIGCGGGLLSEPVARMGATVVGADPSEKNIRIAQTHA---AETGVEIDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F ++ +++    G   ++TINR+M+A A AI A
Sbjct: 121 ERLAEAGEMFDVVLNMEVVEHVADVDFFMRTCASMVKPGGLMFVATINRTMKARALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +D+    G  ++PL  RW+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEAPLGASGMDIIHRTGVFFHPLQDRWNLSPDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|384920503|ref|ZP_10020510.1| 3-demethylubiquinone-9 3-methyltransferase [Citreicella sp. 357]
 gi|384465565|gb|EIE50103.1| 3-demethylubiquinone-9 3-methyltransferase [Citreicella sp. 357]
          Length = 256

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 159/238 (66%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++  AE+AKF A++  WWD  G +KPLH +NP RL +I   +   F +D    RPF+GL
Sbjct: 11  DTVDPAEIAKFEAMSAEWWDPAGKFKPLHMMNPVRLDYITRQVAGEFGRDLSGDRPFDGL 70

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +IVD+GCGGG+L EP+AR+GATV G+DA  +NI +A+LHA       +I+Y  TTAE L 
Sbjct: 71  HIVDIGCGGGLLCEPMARLGATVVGVDAAPRNIPVAQLHA--QQSGLSIDYRHTTAEALA 128

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +  AL    G  + STINR+ +++A AI+ AE +
Sbjct: 129 ATGDRFDVVLNMEVVEHVADPLAYLTACRALLKPGGLHLCSTINRNAKSFAMAILGAEWV 188

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH W+ F+TP+EL  ++ +A +   +  G+V+NP+T  W +SD D+SVN++
Sbjct: 189 MRWLPKGTHDWAKFITPDELFGLMTQAGLTPVDRKGYVFNPVTWDWRISDRDLSVNYV 246


>gi|329847926|ref|ZP_08262954.1| 3-demethylubiquinone-9 3-O-methyltransferase [Asticcacaulis
           biprosthecum C19]
 gi|328842989|gb|EGF92558.1| 3-demethylubiquinone-9 3-O-methyltransferase [Asticcacaulis
           biprosthecum C19]
          Length = 272

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/261 (45%), Positives = 159/261 (60%), Gaps = 21/261 (8%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           NN   ++  S+   E+A+FSA+A  WWD +G + PLH  NPTR+ FIR T   HF +D  
Sbjct: 6   NNSGTASGFSIDEGEVARFSALAAKWWDVKGEFAPLHRFNPTRVRFIRDTCLDHFGRDDL 65

Query: 155 SA------------RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA 202
           +             R FEGL ++DVGCGGG+LSEP+ RMG TVTG+DA EKNI  A+ HA
Sbjct: 66  ALKERSVSAKRNPRRAFEGLRLLDVGCGGGLLSEPMCRMGFTVTGLDASEKNIGTAKAHA 125

Query: 203 D---LDPETSTIEYCCTTAEKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEG 258
           +   LD     I Y   T E+L    +  FD V+  EVIEHV DP  F K+ ++L    G
Sbjct: 126 EEGGLD-----IRYLNQTVEQLAASGEVLFDVVLTMEVIEHVVDPDAFLKTCASLVKPGG 180

Query: 259 ATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
              ++T+NRS++AYA AII AE++L+W+PKGTH WS FL+P E+   L    +      G
Sbjct: 181 LLFVATLNRSLKAYALAIIGAEYVLNWVPKGTHDWSKFLSPSEIRQFLDGTPLLPDPAVG 240

Query: 319 FVYNPLTGRWSLSDDISVNFI 339
             +NPLT +W LSDD  VN++
Sbjct: 241 VEFNPLTQQWGLSDDTEVNYM 261


>gi|77464756|ref|YP_354260.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           2.4.1]
 gi|109895916|sp|Q3IYM5.1|UBIG_RHOS4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|77389174|gb|ABA80359.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           2.4.1]
          Length = 247

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 110/245 (44%), Positives = 161/245 (65%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WW+  G +KPLH +NP RL +I   +   F +D  +  PFEGL
Sbjct: 5   STIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPCRLDYITQQIAAEFDRDLSAPLPFEGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GA V G DA  +NI +A+LHA+      TI+Y  TTAE L 
Sbjct: 65  RLLDIGCGGGLLSEPMARLGAEVIGADAAPRNIPVAKLHAE--QSGLTIDYRNTTAEALA 122

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE +
Sbjct: 123 AAGERFDVVLNMEVVEHVADPLTYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWV 182

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAF 341
           + WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++  
Sbjct: 183 MRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSARDLSVNYVTA 242

Query: 342 GTKNS 346
             + S
Sbjct: 243 SVRRS 247


>gi|295688324|ref|YP_003592017.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter segnis
           ATCC 21756]
 gi|295430227|gb|ADG09399.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter segnis
           ATCC 21756]
          Length = 252

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/248 (48%), Positives = 158/248 (63%), Gaps = 4/248 (1%)

Query: 100 SAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           SAPS S+  A++A+FSAIA  WWD +G + PLH  NP RLAFIR      F +D     P
Sbjct: 7   SAPSWSIDPADVARFSAIAAEWWDPKGKFAPLHVFNPCRLAFIREQALARFGRDGDLRMP 66

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL+++D+GCGGG+LSEP+AR+G +VT IDA EKNIK A  HA    +   I Y   TA
Sbjct: 67  FEGLSLLDIGCGGGLLSEPMARLGFSVTAIDASEKNIKTAATHA--AEQELKIGYRPATA 124

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+L+ E    FD V+  EVIEHVADP  F ++ + L    G   ++T+NR+++A A A I
Sbjct: 125 EQLLAEGAGPFDVVLTMEVIEHVADPGAFLRTCAKLLKPGGIMFVATLNRTLKALALAKI 184

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L W+P GTH W  FL PEEL   L    + ++   G  YNPLTGRWS S D  +N
Sbjct: 185 GAEYVLRWVPPGTHDWKQFLKPEELRAFLAGEPVAMQGPFGVAYNPLTGRWSRSADTDIN 244

Query: 338 FIAFGTKN 345
           ++   TK+
Sbjct: 245 YMMTVTKD 252


>gi|337266177|ref|YP_004610232.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium
           opportunistum WSM2075]
 gi|336026487|gb|AEH86138.1| ubiquinone biosynthesis O-methyltransferase [Mesorhizobium
           opportunistum WSM2075]
          Length = 249

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 152/244 (62%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RL++IR  +   F +DP +ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDQIAVRFGRDPRAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA   NI++A+LHA       +++Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGADASATNIEVAKLHA--AEANVSVDYRATTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +    FD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE++
Sbjct: 125 DAGETFDVILNMEVVEHVADIDLFVAKCGQMVRPGGIMFVATINRTLKALGLAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP+GTHQ+   + PEEL   L  A + V +  G  YNPL  RWS S D+ VN++   
Sbjct: 185 LRWLPRGTHQFGKLVRPEELEKALGGAGLTVIDRTGVTYNPLADRWSRSKDMDVNYMVLA 244

Query: 343 TKNS 346
            K S
Sbjct: 245 EKGS 248


>gi|90422039|ref|YP_530409.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisB18]
 gi|109895914|sp|Q21BZ6.1|UBIG_RHOPB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|90104053|gb|ABD86090.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisB18]
          Length = 254

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 107/247 (43%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + +N   ++ +++  AE+AKFS ++  WWD  G   PLH +NP RL+FIR   CR F ++
Sbjct: 3   MQSNSSDASSATVDPAEIAKFSRLSAQWWDPTGKMAPLHKINPLRLSFIRDAACRKFERN 62

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
             S     GL ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+       I+
Sbjct: 63  AKSLNCLSGLRMIDIGCGAGLLCEPFTRLGAQVIGVDPSATNIAAAKLHAE--KSQLLID 120

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y CTT E++ + + +FD V+A EVIEHV D   F    +A+T   G  V++T+NR+ +++
Sbjct: 121 YRCTTVEQM-DPRERFDIVLAMEVIEHVTDVGAFLARCAAITKPGGLMVVATLNRNWKSF 179

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE+++ WLP+GTHQW  F+TP+EL   L    + V E AG VYNPL  +WSLS 
Sbjct: 180 ALAIVGAEYVMRWLPRGTHQWDKFVTPDELTKHLHNNKLAVTEQAGLVYNPLADKWSLSA 239

Query: 333 DISVNFI 339
           D+ VN++
Sbjct: 240 DMDVNYM 246


>gi|395790205|ref|ZP_10469699.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella taylorii
           8TBB]
 gi|395426856|gb|EJF92974.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella taylorii
           8TBB]
          Length = 246

 Score =  235 bits (599), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 155/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WW+ +G ++PLH  NP RL++IR  +C  F +DP S  PFE L
Sbjct: 6   TTIDQSEIDHFSRIAAEWWNPQGKFRPLHQFNPARLSYIREKICLEFHRDPLSLMPFENL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA + NI++A++HA  +    +I+Y  TTAE L 
Sbjct: 66  KILDIGCGGGLLCEPIARLGAIVVGADAAQTNIEVAKIHAAQN--NLSIDYRTTTAESLA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD ++  EV+EHVAD   F  + + +   +G   +ST+NR+ +A+  AI+ AE+I
Sbjct: 124 NEGEQFDIILNMEVVEHVADVNLFIAATAKMLKPQGLMFVSTLNRTWKAWGLAIVGAEYI 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL  +L   ++ V +  G  YNPL   W+ S D+ VN++   
Sbjct: 184 LRWLPKGTHNYKKFLKPQELKNLLSENAVTVIDEIGITYNPLNDSWNRSRDMDVNYLLLA 243

Query: 343 TK 344
            K
Sbjct: 244 KK 245


>gi|357385920|ref|YP_004900644.1| 3-demethylubiquinone-9 3-methyltransferase [Pelagibacterium
           halotolerans B2]
 gi|351594557|gb|AEQ52894.1| 3-demethylubiquinone-9 3-methyltransferase [Pelagibacterium
           halotolerans B2]
          Length = 247

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 111/234 (47%), Positives = 149/234 (63%), Gaps = 8/234 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF  +A+ WWD  G ++PLH  NP RLA+IR  +  HF  D  + RPF GL I+D+G
Sbjct: 9   EIGKFHKMAEEWWDPNGKFRPLHKFNPVRLAYIREHVIAHFGLDDKAMRPFAGLRILDIG 68

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEKLVEEQ 225
           CGGG+L EP+AR+GATV G DA EKN+KIA LHA+   LD     I+Y  TT+E L    
Sbjct: 69  CGGGLLCEPMARLGATVVGADAGEKNVKIASLHAEQSGLD-----IDYRATTSEDLAAAG 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            +FD V+  EV+EHV+D   + +S   L    G   ++TINR+ RAYA AI+ AE +L W
Sbjct: 124 EQFDVVLNMEVVEHVSDVQLYLESCCNLVKPGGLMFVATINRTARAYALAIVGAERVLRW 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH +   +TPEE+  I  R  + VK+  G  +NPL   W  S D++VN++
Sbjct: 184 LPKGTHSYEKLVTPEEITSITGRNGMQVKDRTGVTFNPLKNEWGRSRDMTVNYM 237


>gi|338972232|ref|ZP_08627607.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|338234396|gb|EGP09511.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 249

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 156/237 (65%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+A+FS +++ WWD +G   PLH +NP RL +IR   CR F ++P S     GL
Sbjct: 9   STVDPGEVARFSELSEQWWDPKGKMAPLHKINPLRLTYIRDAACRKFDRNPKSLNCLSGL 68

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCG G+L EPL R+GA V G+D    NI +A+LHA+      +I+Y CTT E++ 
Sbjct: 69  RILDIGCGAGLLCEPLTRLGAQVIGVDPSATNISVAKLHAERG--HLSIDYRCTTIEEM- 125

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHVA+   F    +AL       V+STINR+ +++A AI+ AE++
Sbjct: 126 DPRERFDIVLAMEVVEHVANVGMFLDRCAALLKPSSMLVVSTINRNWKSFALAIVGAEYV 185

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQW  F+TP EL   L+R  + + + AG VYNPL  RWS+S D+ VN++
Sbjct: 186 LRWLPRGTHQWDKFVTPAELTHHLERNKLAISDQAGVVYNPLADRWSISSDMDVNYM 242


>gi|395787584|ref|ZP_10467182.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella birtlesii
           LL-WM9]
 gi|395410961|gb|EJF77502.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella birtlesii
           LL-WM9]
          Length = 248

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 156/237 (65%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F +D  S  PFE L
Sbjct: 7   TTIDQNEIDHFSRIAAEWWNPQGKFRPLHQFNPTRLAYIREKICSEFNRDLVSLMPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GAT+ G DA   NI++A++HA  +    +I+Y  TTAE+L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGATIVGADAAYTNIEVAKIHAAQN--NLSIDYRVTTAEELA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD ++  EV+EHVAD   F K+ + +   +G   +ST+NR+ +++  AII AE+I
Sbjct: 125 NNGEQFDIILNMEVVEHVADVNLFIKTTAKMLKPQGLMFVSTLNRTWKSWGLAIIGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLPKGTH +  FL P+EL  +L + ++ V +  G  YNPL   W+ S D+SVN++
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKNLLFQNTLTVIDEIGITYNPLNDSWNRSKDMSVNYL 241


>gi|414169111|ref|ZP_11424948.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia clevelandensis
           ATCC 49720]
 gi|410885870|gb|EKS33683.1| 3-demethylubiquinone-9 3-methyltransferase [Afipia clevelandensis
           ATCC 49720]
          Length = 249

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 156/237 (65%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+A+FS +++ WWD +G   PLH +NP RL +IR   CR F ++P S     GL
Sbjct: 9   STVDPGEVARFSELSEQWWDPKGKMAPLHKINPLRLTYIRDAACRKFDRNPKSLNCLSGL 68

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCG G+L EPL R+GA V G+D    NI +A+LHA+      +I+Y CTT E++ 
Sbjct: 69  RILDIGCGAGLLCEPLTRLGAQVIGVDPSATNISVAKLHAERG--HLSIDYRCTTIEEM- 125

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHVA+   F    +AL       V+STINR+ +++A AI+ AE++
Sbjct: 126 DPRERFDIVLAMEVVEHVANVGMFLDRCAALLKPSSMLVVSTINRNWKSFALAIVGAEYV 185

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQW  F+TP EL   L+R  + + + AG VYNPL  RWS+S D+ VN++
Sbjct: 186 LRWLPRGTHQWDKFVTPAELTHHLERNKLAISDQAGVVYNPLADRWSISSDMDVNYM 242


>gi|209883252|ref|YP_002287109.1| 3-demethylubiquinone-9 3-methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|337739655|ref|YP_004631383.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Oligotropha
           carboxidovorans OM5]
 gi|386028673|ref|YP_005949448.1| 3-demethylubiquinone-9 3-methyltransferase [Oligotropha
           carboxidovorans OM4]
 gi|209871448|gb|ACI91244.1| 3-demethylubiquinone-9 3-O-methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|336093741|gb|AEI01567.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Oligotropha
           carboxidovorans OM4]
 gi|336097319|gb|AEI05142.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Oligotropha
           carboxidovorans OM5]
          Length = 254

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 109/247 (44%), Positives = 157/247 (63%), Gaps = 3/247 (1%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + +    ++  S+  AE+A+FS ++  WWD  G  KPLH +NP RLA+IR   CR F ++
Sbjct: 5   ITDTSAQTSSPSVDPAEIARFSKLSSDWWDPNGRMKPLHRINPLRLAYIRDAACRKFGRN 64

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
           P S     GL ++D+GCG G+L EPLAR+GA V GID  E NI +A+LHA+      +I+
Sbjct: 65  PKSLTCLSGLRVLDIGCGAGLLCEPLARLGAEVVGIDPSETNIAVAKLHAERG--HLSID 122

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  TT E  ++ + +FD V+A EV+EHV D   F    ++     G   +ST+NR+ +++
Sbjct: 123 YRATTVEA-IDMRERFDIVLAMEVVEHVNDVGAFLARCASAMKPSGLMTVSTLNRTWKSF 181

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE++L WLP+GTH W  F+TPEEL   L+ + + V E  G VYNPL  RWSLS 
Sbjct: 182 ALAIVGAEYVLRWLPRGTHSWDKFVTPEELSNYLEASKLGVTEQTGVVYNPLADRWSLSS 241

Query: 333 DISVNFI 339
           D+ VN++
Sbjct: 242 DMDVNYM 248


>gi|402848552|ref|ZP_10896809.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodovulum sp. PH10]
 gi|402501299|gb|EJW12954.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodovulum sp. PH10]
          Length = 274

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 149/237 (62%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+A+FSAIA+TWWD  G    LH  NP R+ ++R   CR F +D        GL
Sbjct: 33  STVDQAEIARFSAIAETWWDPRGKMAALHKFNPVRVGWVRDQACRRFGRDTKRIDTLAGL 92

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGGILSEPLAR+GA + G D    NI++A+LHA+       I+Y  TTAE L 
Sbjct: 93  RILDIGCGGGILSEPLARLGAEMVGADPATTNIEVAKLHAE--KSGLAIDYRNTTAEDLA 150

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   KFD V+A EV+EHVAD   F    + +    G  + +T+NR+++++A AI+ AE++
Sbjct: 151 EAGEKFDVVLAMEVVEHVADVPLFVSICAGMVKPGGLMIAATLNRTLKSFAMAIVGAEYV 210

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP GTHQW  F+TP EL   +  A + V   +G +YNPL  RW L  D+ VN++
Sbjct: 211 LRWLPIGTHQWDKFVTPAELETAMSEAGLVVSAESGVLYNPLADRWGLGRDMDVNYM 267


>gi|395781785|ref|ZP_10462196.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           rattimassiliensis 15908]
 gi|395420440|gb|EJF86716.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           rattimassiliensis 15908]
          Length = 247

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 155/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F+ DP S  PF+ L
Sbjct: 7   TTIDQSEIDHFSRIATEWWNPQGKFRPLHQFNPTRLAYIREKICLEFKCDPVSLTPFDNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G+DA + NI++A++HA  +    +I+Y   TAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVIGVDAAQTNIEVAKIHAAQN--NLSIDYRTMTAETLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  KFD ++  EV+EHVAD     +S + +   +G   IST+NR+ +A+  AI+ AE+I
Sbjct: 125 NEGEKFDIILNMEVVEHVADVNLLIESTAKMLKPQGLMFISTLNRTWKAWGLAIVGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P EL   L + ++ + +  G  YNP    W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPRELKDFLSKNALTIIDEIGITYNPFNDSWNRSKDMDVNYLLLA 244

Query: 343 TK 344
            +
Sbjct: 245 KR 246


>gi|84684625|ref|ZP_01012526.1| 3-demethylubiquinone-9 3-methyltransferase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667604|gb|EAQ14073.1| 3-demethylubiquinone-9 3-methyltransferase [Maritimibacter
           alkaliphilus HTCC2654]
          Length = 254

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 110/246 (44%), Positives = 160/246 (65%), Gaps = 9/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+AKF A+A  WWD  G +KPLH +NP RL +I S +   F +D    +PF GL
Sbjct: 12  TTVDPSEVAKFEAMAAEWWDPTGKFKPLHMMNPVRLDYITSQIAAEFGRDLSDDKPFAGL 71

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
            I+D+GCGGG+LSEP+AR+GA V G DA E+NI +A++HA+   LD     I+Y  TTAE
Sbjct: 72  RILDIGCGGGLLSEPMARLGADVVGADAAERNIPVAQVHAEQSGLD-----IDYRFTTAE 126

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L     +FD V+  EV+EHVADP  +  +   L    G  V STINR+ +++  AI+ A
Sbjct: 127 ALAVAGEQFDVVLNMEVVEHVADPLSYLTACQQLLKPGGLMVCSTINRNPKSFMVAIVGA 186

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           EH++ WLPKGTH+W  F+TP+EL  ++  + + + +  GFV+NP+   WS+S  D+SVN+
Sbjct: 187 EHVMRWLPKGTHEWDKFITPDELGNLITESGLRLVDKQGFVFNPILWSWSISSRDLSVNY 246

Query: 339 IAFGTK 344
           +    K
Sbjct: 247 VTASVK 252


>gi|126463597|ref|YP_001044711.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|166201213|sp|A3PNM3.1|UBIG_RHOS1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|126105261|gb|ABN77939.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 247

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 159/238 (66%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WW+  G +KPLH +NP RL +I   +   F +D  +  PFEGL
Sbjct: 5   STIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPCRLDYITQQIAAEFDRDLSAPLPFEGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GA V G DA  +NI +A+LHA+      TI+Y  TTAE L 
Sbjct: 65  RLLDIGCGGGLLSEPMARLGAEVIGADAAPRNIPVAKLHAE--QSGLTIDYRNTTAEALA 122

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE +
Sbjct: 123 AAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWV 182

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++
Sbjct: 183 MRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSTRDLSVNYV 240


>gi|332559650|ref|ZP_08413972.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodobacter
           sphaeroides WS8N]
 gi|332277362|gb|EGJ22677.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodobacter
           sphaeroides WS8N]
          Length = 247

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 159/238 (66%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WW+  G +KPLH +NP RL +I   +   F +D  +  PFEGL
Sbjct: 5   STIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPCRLDYITQQIAAEFDRDLSAPLPFEGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GA V G DA  +NI +A+LHA+      TI+Y  TTAE L 
Sbjct: 65  RLLDIGCGGGLLSEPMARLGAEVIGADAAPRNIPVAKLHAE--QSGLTIDYRNTTAEALA 122

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE +
Sbjct: 123 AAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWV 182

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFI 339
           + WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++
Sbjct: 183 MRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSARDLSVNYV 240


>gi|319407558|emb|CBI81208.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. 1-1C]
          Length = 247

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 109/246 (44%), Positives = 156/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +  P+++   E+  FS IA  WWD +G ++ LH  NPTRLA+I+  +C  F ++P S  P
Sbjct: 3   NETPTTIDQNEIDHFSRIAAEWWDPQGKFRSLHNFNPTRLAYIKEKICLAFNRNPVSLTP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA       +I Y  TTA
Sbjct: 63  FEGLKILDIGCGGGLLCEPMARLGATVIGADAAQTNIEVAKIHA--IQSGLSINYRTTTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L  E  +FD ++  EV+EHV +   F ++ + +   +G   I+T+NR+ +A+  AIIA
Sbjct: 121 EALANEGEQFDVILNMEVVEHVVNVDFFIEATAKMLKPQGLMFIATLNRTWKAWGLAIIA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLPKGTH +  FL P EL  IL   S+ + +  G  YNPLT  W  S D+ VN+
Sbjct: 181 AEYILKWLPKGTHDYKKFLKPHELKKILFTNSLSIIDEIGITYNPLTDSWKRSCDMDVNY 240

Query: 339 IAFGTK 344
           I    +
Sbjct: 241 ILLAKR 246


>gi|126730063|ref|ZP_01745875.1| 3-demethylubiquinone-9 3-methyltransferase [Sagittula stellata
           E-37]
 gi|126709443|gb|EBA08497.1| 3-demethylubiquinone-9 3-methyltransferase [Sagittula stellata
           E-37]
          Length = 250

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 107/238 (44%), Positives = 160/238 (67%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+AKF A+A  WWD  G +KPLH +NP RL +I + +   F +   + +PF GL
Sbjct: 7   TTVDASEIAKFEAMAAEWWDPNGKFKPLHMMNPVRLDYITTQIAGEFDRRLGTEKPFTGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G+DA  +NI +A  HA        I+Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGAEVVGVDAAARNIPVAEAHAA--QSGLAIDYRHTTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI+ AE++
Sbjct: 125 AAGERFDVVLNMEVVEHVADPLVYLTACRQLLKPGGLHLCSTINRNPKSFAMAIVGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH+WS F+TP+EL  +++RA +D  +  G+V+NP++ RWS+SD D+SVN++
Sbjct: 185 MRWLPKGTHEWSKFITPDELYDLMRRAGLDPVDRKGYVFNPVSWRWSISDRDLSVNYV 242


>gi|395785815|ref|ZP_10465543.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tamiae
           Th239]
 gi|423717290|ref|ZP_17691480.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tamiae
           Th307]
 gi|395424273|gb|EJF90460.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tamiae
           Th239]
 gi|395427505|gb|EJF93596.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tamiae
           Th307]
          Length = 246

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 107/242 (44%), Positives = 156/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +D + A P +GL
Sbjct: 7   TTIDQAEIDHFSRIAAEWWNPKGKFRPLHKFNPTRLAYIKEKICWAFERDLHCAEPLKGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GA V G DA   NI++ARLHA        I+Y  TTAE+L 
Sbjct: 67  RILDIGCGGGLLCEPMARLGADVVGADASTTNIEVARLHAV--QSDVVIDYRATTAEELA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +   KFD V+  EV+EHV+D   F  +   +   EG   ++T+NR+++A+A AII AE++
Sbjct: 125 DAGEKFDVVLNMEVVEHVSDVHLFMSASGQMVKPEGLMFVATLNRTLKAWALAIIGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           LHWLPKGTH ++ FL P+EL   L  + + V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LHWLPKGTHDYNKFLRPDELKKELHHSGLTVIDQLGVTYNPLKDSWNRSKDMDVNYMLLA 244

Query: 343 TK 344
            +
Sbjct: 245 RR 246


>gi|265993637|ref|ZP_06106194.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 3 str. Ether]
 gi|262764618|gb|EEZ10539.1| hexaprenyldihydroxybenzoate methyltransferase [Brucella melitensis
           bv. 3 str. Ether]
          Length = 248

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 155/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WWD +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAQWWDPQGKFRPLHKFNPTRLAYIKEKVCAKFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL  +D+GCGGG+L EP+AR+GATV G DA   NI++A++HA     +  I+Y   T E
Sbjct: 64  EGLRFLDIGCGGGLLCEPMARLGATVIGADASATNIEVAKIHA--AQSSLDIDYRAATTE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +   KFD V+  EV+EHV+D   F  + SA+    G   ++TINR+++AY  AII A
Sbjct: 122 ALADAGEKFDVVLNMEVVEHVSDVDLFMSATSAMVKPGGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL     +A + + +  G  YNPL   W+ S D+ VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELEAAFSKADLRLIDKLGVTYNPLADSWNRSRDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|209965919|ref|YP_002298834.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum centenum
           SW]
 gi|209959385|gb|ACJ00022.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodospirillum centenum
           SW]
          Length = 263

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 106/244 (43%), Positives = 163/244 (66%), Gaps = 3/244 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ +FSA+A  WWD  G + PLH  NP RLA+IR  LC  + +DP + RP EG+
Sbjct: 22  TTVDPGEVERFSAMAAEWWDPRGKFSPLHKFNPVRLAYIRDALCDRWGRDPMAERPLEGI 81

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++EPLAR+GA V GIDA E+N+K A  HA L+  T T++Y   TAE L 
Sbjct: 82  RILDVGCGGGLIAEPLARLGAEVVGIDASERNVKTAATHA-LETGT-TVDYRVGTAEALA 139

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A E++EHVAD      +++ LT  +G   ++T+NR+ +++  AI+ AE++
Sbjct: 140 ATGERFDVVLALEIVEHVADVDLLLTAITTLTKQDGLLFMATVNRTAKSFVMAIVGAEYV 199

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           L WLP+GTH W  F+ P EL   L++    +K + G +YNP+T R+SL++ D+ VN++ +
Sbjct: 200 LRWLPRGTHDWRKFIRPSELATGLRQLGFGIKNLTGLIYNPMTDRFSLAERDVDVNYMLY 259

Query: 342 GTKN 345
             ++
Sbjct: 260 AARD 263


>gi|119946174|ref|YP_943854.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas ingrahamii
           37]
 gi|119864778|gb|ABM04255.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas ingrahamii
           37]
          Length = 254

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 113/248 (45%), Positives = 161/248 (64%), Gaps = 5/248 (2%)

Query: 100 SAPS--SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +APS  ++  +E+AKF A++  WWD  G +KPLH LNPTR+ +I   +   F +D  S +
Sbjct: 3   AAPSRNTIDKSEVAKFEAMSAEWWDPTGKFKPLHMLNPTRIEYIVDQIATKFSRDRNSLK 62

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           PFEGL  +D+GCGGG+LSEP+A++GA V G DA  +NI +A++HA  +    TI+Y  T 
Sbjct: 63  PFEGLRFLDIGCGGGLLSEPMAQLGAEVVGADAAARNIPVAQIHA--EKSGLTIDYRHTM 120

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE LV+E   FD ++  EVIEHVA P  F  + + L    G  + STINR+ ++Y  AII
Sbjct: 121 AEALVDEGELFDVILNMEVIEHVASPQVFLNACAELLKPGGLMLCSTINRNPKSYIVAII 180

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE ++ WLP GTH W+ F+TP+EL +I ++A +      GF +NPL  RWS+S  D+SV
Sbjct: 181 GAERVMRWLPIGTHDWAKFITPDELSVITKKAGLTQLNKRGFSFNPLLWRWSISQRDLSV 240

Query: 337 NFIAFGTK 344
           N++    K
Sbjct: 241 NYVTASIK 248


>gi|315500228|ref|YP_004089031.1| ubiquinone biosynthesis o-methyltransferase [Asticcacaulis
           excentricus CB 48]
 gi|315418240|gb|ADU14880.1| ubiquinone biosynthesis O-methyltransferase [Asticcacaulis
           excentricus CB 48]
          Length = 269

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 111/243 (45%), Positives = 154/243 (63%), Gaps = 9/243 (3%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A  S+   ++A+FSA+A  WWD +G + PLH  NP R+ FIR T   HF +DP +  PF 
Sbjct: 24  AGPSIDAEDVARFSALAAKWWDPKGEFAPLHKFNPNRVRFIRDTCVDHFLRDPRAVAPFG 83

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTT 217
            L ++D+GCGGG+LSEP+ RMG  VTGIDA EKNI  A+ HA    LD     I Y   T
Sbjct: 84  DLRLIDIGCGGGLLSEPMKRMGFDVTGIDASEKNIGTAKAHAAEVGLD-----IRYLAQT 138

Query: 218 AEKLV-EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            E++V  ++  FD V+  EVIEHV DP  F K+ ++L    G   I+T+NR+++A+A  I
Sbjct: 139 VEQVVASKEPGFDVVLTMEVIEHVNDPESFLKTCASLVKPGGLLFIATLNRTLKAHALGI 198

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           +AAE++L W+PKGTH W+ FL PEE+   L+   +      G  YNP T  W+LS+D +V
Sbjct: 199 VAAEYVLQWVPKGTHDWNKFLKPEEIEGFLEGTGLTPDPAVGVSYNPFTATWALSNDTAV 258

Query: 337 NFI 339
           N++
Sbjct: 259 NYM 261


>gi|254451425|ref|ZP_05064862.1| 3-demethylubiquinone-9 3-O-methyltransferase [Octadecabacter
           arcticus 238]
 gi|198265831|gb|EDY90101.1| 3-demethylubiquinone-9 3-O-methyltransferase [Octadecabacter
           arcticus 238]
          Length = 248

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 167/250 (66%), Gaps = 9/250 (3%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A +++  AE+AKF A+A  WWD EG +KPLH LNPTRL +I   +   F +D  + +P
Sbjct: 2   QTAQTTVDPAEIAKFEAMAAEWWDLEGKFKPLHMLNPTRLDYITRQIAAEFDRDLMADKP 61

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCC 215
           F+GL I+D+GCGGG+L EP+AR+GA + G DA E+NI +A++HA+   LD     I+Y  
Sbjct: 62  FDGLRILDIGCGGGLLCEPMARLGADIVGADAAERNIPVAQVHAEQSGLD-----IDYRF 116

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           TTAE +     +FD V+  EV+EHVA P  +  +   L   EG  + STINR+ +++A A
Sbjct: 117 TTAEDMAAAGEQFDIVLNMEVVEHVASPLSYLTACQQLLKPEGLHICSTINRNPKSFAMA 176

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DI 334
           I+ AE+++ WLPKGTH+++ F+TP+EL  +L++A ++  +  GF ++ L   WS+SD D+
Sbjct: 177 IVGAEYVMRWLPKGTHEFNKFITPDELFALLEQAGLNPVDRKGFKFDFLGWSWSISDSDM 236

Query: 335 SVNFIAFGTK 344
           SVN++    K
Sbjct: 237 SVNYVTAALK 246


>gi|399068897|ref|ZP_10749207.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter sp. AP07]
 gi|398045449|gb|EJL38169.1| ubiquinone biosynthesis O-methyltransferase [Caulobacter sp. AP07]
          Length = 258

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 121/248 (48%), Positives = 159/248 (64%), Gaps = 4/248 (1%)

Query: 100 SAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +APS S+  A++A+FSAIA  WWD  G + PLH  NP RLAFIR      F +D  +  P
Sbjct: 13  NAPSWSIDPADVARFSAIAAEWWDPHGKFAPLHVFNPCRLAFIREQALARFDRDGNARSP 72

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL+++DVGCGGG+LSEP+AR+G TVT IDA E NIK A  HA        I Y   TA
Sbjct: 73  FEGLSLLDVGCGGGLLSEPMARLGFTVTAIDASENNIKTAAAHAAG--HGLEIGYRPATA 130

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+L+ E    FD V+  EVIEHVADP +F ++ + L    G  +++T+NR+++A A A I
Sbjct: 131 EQLLAEGAGPFDVVLTMEVIEHVADPGQFLRTCTQLLAPGGLLIVATLNRTLKALALAKI 190

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L W+P GTH W+ FL PEEL   L    + V    G  YNP+TGRWS S D+ VN
Sbjct: 191 GAEYVLRWVPPGTHDWNQFLKPEELRAFLAGEPVAVHGPFGVAYNPMTGRWSRSTDVGVN 250

Query: 338 FIAFGTKN 345
           ++   TK+
Sbjct: 251 YMMTVTKD 258


>gi|304322090|ref|YP_003855733.1| 3-demethylubiquinone-9 3-methyltransferase [Parvularcula
           bermudensis HTCC2503]
 gi|303300992|gb|ADM10591.1| putative 3-demethylubiquinone-9 3-methyltransferase protein
           [Parvularcula bermudensis HTCC2503]
          Length = 256

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 153/237 (64%), Gaps = 3/237 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+ KF+A+A+ WWD  G +KPLH  NP RLA +R  LC HF +D +  RP EGL 
Sbjct: 6   TIDDQEVEKFAAMAEEWWDPFGKFKPLHKFNPVRLAALRDRLCAHFGRDRFQKRPLEGLR 65

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV- 222
           ++D+GCGGG++SEP+AR+GA V GID  ++NIKIA  H         ++Y   T E+LV 
Sbjct: 66  LLDIGCGGGLVSEPMARLGAEVVGIDPADRNIKIAEAHR--RESGVNVDYRTVTVERLVA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E++  FD V++ E +EHVADPA F    +AL    G   ++T+NR++++  TA IAAE+I
Sbjct: 124 EKEPPFDIVLSLEAVEHVADPAYFLSQGAALVRPGGLMAVATLNRTLKSLLTAKIAAEYI 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP GTH    FL P E+   L++A + V E  GF YNPL   W  SDD+ VN++
Sbjct: 184 LRWLPAGTHDPRKFLKPAEIAGPLRQAGLTVTEEVGFSYNPLFDSWRESDDLEVNYL 240


>gi|197104308|ref|YP_002129685.1| 3-demethylubiquinone-9 3-methyltransferase [Phenylobacterium
           zucineum HLK1]
 gi|196477728|gb|ACG77256.1| 3-demethylubiquinone-9 3-methyltransferase [Phenylobacterium
           zucineum HLK1]
          Length = 252

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 114/241 (47%), Positives = 153/241 (63%), Gaps = 3/241 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A SS+  AE+ +FS IA  WWD  G + PLH  NP RLAFIR      F +D    RPF
Sbjct: 6   AARSSIDPAEVERFSRIAAEWWDPNGKFAPLHRFNPVRLAFIRDHALYRFGRDGAQRRPF 65

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+AR+G TVT +DA E+NI  A  HA    +   I+Y CTTAE
Sbjct: 66  EGLRLLDIGCGGGLLSEPMARLGFTVTAVDASERNILTASTHA--AEQGLDIDYRCTTAE 123

Query: 220 KLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L+   +  FD ++  EVIEHVADP  + +  S L    G  +++T+NR+++A A A I 
Sbjct: 124 DLLAAGESPFDVILNMEVIEHVADPGAYLRDCSRLLAPGGLMIVATLNRTLKALALAKIG 183

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLP GTH W+ FL P+E+   L    + V    G V+NPLTGRW+ S D  VN+
Sbjct: 184 AEYVLRWLPAGTHDWNKFLKPDEIRGFLAGEPVAVDGPYGVVFNPLTGRWTESVDSDVNY 243

Query: 339 I 339
           +
Sbjct: 244 M 244


>gi|144898814|emb|CAM75678.1| Ubiquinone biosynthesis O-methyltransferase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 249

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 148/237 (62%), Gaps = 4/237 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F+A+A+ WWD  G +KPLH  NP RLAFIR  +  HF +DP   +PF GL ++DVG
Sbjct: 17  EVARFTAMAEEWWDPTGKFKPLHRFNPVRLAFIRREMAAHFGRDPQDPKPFAGLTLLDVG 76

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSEPLARMG +VTGIDA +KNI +AR+HA        +EY     E +  E   F
Sbjct: 77  CGGGLLSEPLARMGFSVTGIDAGDKNIAVARIHA--QKSGVAVEYRVGGPEDVAAES--F 132

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V++ EVIEHV DP  F    +      G  + +T+NR+ +++  AI+ AE++L WLPK
Sbjct: 133 DVVLSMEVIEHVPDPVRFIGLAAGALRPGGVFLGATLNRTAKSWLMAIVGAEYVLRWLPK 192

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           GTH W  F+ P E    L+ A ID K   G  + PLT  W  + ++ VN++  G K+
Sbjct: 193 GTHDWKKFVKPSEFAGWLRGAGIDTKAFRGMEFQPLTDEWRETMNLDVNYMLMGVKS 249


>gi|254455648|ref|ZP_05069077.1| 3-demethylubiquinone-9 3-O-methyltransferase [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082650|gb|EDZ60076.1| 3-demethylubiquinone-9 3-O-methyltransferase [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 240

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 156/238 (65%), Gaps = 4/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   E+ KFS +A  WWD EG +KPLH  NP R+ +I+  +   F+      +P + +
Sbjct: 2   SSVNKKEIEKFSKMAAEWWDPEGKFKPLHKFNPIRIKYIKDNIIYSFKLKS-KEKPLQKI 60

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+LSEP+AR+GA VTGIDA +KNIKIA+LHA        I Y C++ EKL 
Sbjct: 61  NILDIGCGGGLLSEPMARLGANVTGIDASDKNIKIAKLHAK--KNKLNINYFCSSPEKL- 117

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + ++KFD ++  E+IEHV D   F KS S L    G   ++T+N+++++Y  AII AE++
Sbjct: 118 KIKKKFDVILNMEIIEHVEDINFFIKSCSKLLKKNGLMFVATLNKTLKSYVFAIIGAEYV 177

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           L WLP GTH W  F+ PE+L  IL + ++ ++++ G  ++     W++S D S+N+IA
Sbjct: 178 LRWLPIGTHDWEKFVKPEDLKNILNKNNLKIEKIDGMNFDIFKDEWNISKDTSINYIA 235


>gi|402820801|ref|ZP_10870365.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           IMCC14465]
 gi|402510447|gb|EJW20712.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           IMCC14465]
          Length = 246

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 110/243 (45%), Positives = 152/243 (62%), Gaps = 2/243 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+AKF A+A  WW  +G +KPLH  NPTRL +I + +C  F +   +    +G+
Sbjct: 4   STINPEEVAKFEAMAAEWWSPDGKFKPLHKFNPTRLDYIITHICAQFNRLRSAPDSLKGI 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+L EPL R+GA+VTGID  E NI +ARLHA+   E   I Y   ++E+LV
Sbjct: 64  NILDIGCGGGLLCEPLTRLGASVTGIDVTEANINVARLHAE--QEGLDINYEVISSEELV 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + FD V+  EV+EHV D   F KS S L    G    +T+NR+ ++Y  AI+ AE+I
Sbjct: 122 KSGKTFDVVLNMEVVEHVGDVGLFMKSCSQLVKPGGLMFYATLNRTAKSYLLAILGAEYI 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FLTP+EL   L    +   + AG  + PLTG+W LS D+ VN+I   
Sbjct: 182 LRWLPAGTHDWHKFLTPQELTDYLTLNDLHNIDTAGMSFMPLTGKWYLSKDLGVNYIGLA 241

Query: 343 TKN 345
            K+
Sbjct: 242 QKH 244


>gi|319899210|ref|YP_004159303.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella clarridgeiae
           73]
 gi|319403174|emb|CBI76733.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella clarridgeiae
           73]
          Length = 247

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 156/237 (65%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WWD +G ++PLH  NP RLA+I+  +C  F ++P S  PFEGL
Sbjct: 7   TTIDQSEIDHFSRIAAEWWDPQGKFRPLHNFNPIRLAYIKEKICLAFDRNPISLMPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G DA + NI+IA++HA        I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVIGADAAQTNIEIAKIHA--IQSGLLIDYRTTTAEDLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               KFD ++  EV+EHV +   F ++ + +   +G   ++T+NR+ +A+  AI++AE+I
Sbjct: 125 NAGEKFDVILNMEVVEHVMNVDLFIEATAKMLKPQGLMFVATLNRTWKAWVLAIVSAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLPKGTH +  FL P+EL  +L + S+ + +  G  YNPLT  W+ S D+ VN+I
Sbjct: 185 LQWLPKGTHDYKKFLKPQELKKLLYKNSLAIVDEIGITYNPLTDSWNRSCDMDVNYI 241


>gi|221640671|ref|YP_002526933.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           KD131]
 gi|429207319|ref|ZP_19198578.1| 3-demethylubiquinol 3-O-methyltransferase [Rhodobacter sp. AKP1]
 gi|254789995|sp|B9KPP7.1|UBIG_RHOSK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|221161452|gb|ACM02432.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacter sphaeroides
           KD131]
 gi|428189694|gb|EKX58247.1| 3-demethylubiquinol 3-O-methyltransferase [Rhodobacter sp. AKP1]
          Length = 247

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 108/238 (45%), Positives = 158/238 (66%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WW+  G +KPLH +NP RL +I   +   F +D  +  PFEGL
Sbjct: 5   STIDPAEVAKFEAMAAEWWNPHGKFKPLHQMNPCRLDYITQQIAAEFDRDLSAPLPFEGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GA V G DA  +NI +A+LHA  +     I+Y  TTAE L 
Sbjct: 65  RLLDIGCGGGLLSEPMARLGAEVIGADAAPRNIPVAKLHA--EQSGLAIDYRNTTAEALA 122

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++A AI+ AE +
Sbjct: 123 AAGERFDVVLNMEVVEHVADPLAYLTACRELLKPGGLMICSTLNRNPKSFAMAIVGAEWV 182

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFI 339
           + WLPKGTH WS F+TP+EL  ++++A +D  +  G V+NP++  WSLS  D+SVN++
Sbjct: 183 MRWLPKGTHDWSKFITPDELYDLIRKAGLDPVDRKGMVFNPVSWSWSLSARDLSVNYV 240


>gi|115522187|ref|YP_779098.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisA53]
 gi|122298099|sp|Q07VB6.1|UBIG_RHOP5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|115516134|gb|ABJ04118.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisA53]
          Length = 253

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 153/237 (64%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP R+AFIR   CR F ++P S     GL
Sbjct: 13  STVDPAEIAKFSKLSAEWWDPTGRMAPLHKINPHRVAFIRDAACRKFDRNPKSLNSLAGL 72

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V GID    NI  A++HA+       I+Y  TTAE + 
Sbjct: 73  RMIDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAAKVHAE--KSRLLIDYRNTTAEAM- 129

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EVIEHV D   F    +A+    G  V++T+NR+ +++A AI+ AE++
Sbjct: 130 DPRERFDIVLAMEVIEHVTDVGAFLGRCAAMMKPTGLMVVATLNRNWKSFALAIVGAEYV 189

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           + WLP+GTHQW  F+TPEEL   LQ + + V E AG VYNPL  +W+LS D+ VN++
Sbjct: 190 MRWLPRGTHQWDKFVTPEELTRHLQNSRLAVTEQAGLVYNPLADKWNLSADMDVNYM 246


>gi|407779486|ref|ZP_11126741.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           pacificus pht-3B]
 gi|407298617|gb|EKF17754.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           pacificus pht-3B]
          Length = 248

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 151/236 (63%), Gaps = 2/236 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  FSA+A  WW+  G +  LH  NP RLA+IR  +  HF +DP++ +PF GL ++D+G
Sbjct: 13  EIEHFSALAAEWWNPAGKFGTLHKFNPVRLAYIRDHVAAHFGRDPHAVKPFAGLRLLDIG 72

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+L EP+AR+GA V G DA E NI++A+LHA        I+Y  TTAE L ++  KF
Sbjct: 73  CGGGLLCEPMARLGADVVGADASETNIEVAKLHAA--EGGLAIDYRATTAESLADDGEKF 130

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D ++  EV+EHV+D   F     A+    G   ++TINR+++A+  AII AE++L WLP+
Sbjct: 131 DVILNMEVVEHVSDVDLFIAKCGAMLKPGGLIFVATINRTLKAWGLAIIGAEYVLGWLPR 190

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTHQ+   + P+EL   L  A + + +  G VYNPL  RW  S D+ VN++  G+K
Sbjct: 191 GTHQYDKLVRPQELERALSAAQVAITDRTGVVYNPLADRWQRSRDMDVNYMVVGSK 246


>gi|297181243|gb|ADI17437.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured Rhodospirillales bacterium HF0070_31K06]
          Length = 255

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 160/254 (62%), Gaps = 11/254 (4%)

Query: 97  KKHSAP--SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           K+ S P  +S+ + E+AKFSA+AD WWD +G ++PLH LNP RLA+IR  +C +F +D  
Sbjct: 4   KQQSRPLNASVDNHEIAKFSALADEWWDPKGSFQPLHKLNPARLAYIRDRICANFDRDTA 63

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTI 211
              P   L + D+GCGGG+L+EP+AR+GA VTG DA E+NI +AR HA+   LD     I
Sbjct: 64  DQHPLARLRVADIGCGGGLLTEPMARLGAEVTGFDAAERNIMVARNHAERMGLD-----I 118

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           +Y   T E +  E  +FD V+  EV+EHVAD A+F  +   L    G   ++T+NR++++
Sbjct: 119 DYRFATVENIASEGEQFDVVLNMEVVEHVADVAQFLDASCTLVRPGGIMFVATLNRTLKS 178

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +A AI+ AE+IL WLP+GTH W  F+ P E+   L+R  +     AG  +N L   W + 
Sbjct: 179 FAFAIVGAEYILRWLPRGTHNWRKFVRPSEMAAALRRGGLTDIAFAGLAFNALKDTWRID 238

Query: 332 D-DISVNFIAFGTK 344
           + DISVN++    +
Sbjct: 239 EWDISVNYLGCAVR 252


>gi|424872527|ref|ZP_18296189.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. viciae WSM1455]
 gi|393168228|gb|EJC68275.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. viciae WSM1455]
          Length = 248

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/246 (45%), Positives = 158/246 (64%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G ++PLH  NP RLA+IR   C +F +DP SARP
Sbjct: 3   EGAKSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLAYIRDRACENFSRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPIARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELTEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G V+NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLVASGLEITDRTGVVFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|424916634|ref|ZP_18339998.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM597]
 gi|392852810|gb|EJB05331.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM597]
          Length = 248

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 112/247 (45%), Positives = 158/247 (63%), Gaps = 2/247 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G ++PLH  NP RLA+IR   C +F +DP SARP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLAYIRDKACENFSRDPRSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGATVTG D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTKN 345
           +    + 
Sbjct: 241 MLLAKRG 247


>gi|385234713|ref|YP_005796055.1| 3-demethylubiquinone-9 3-methyltransferase [Ketogulonicigenium
           vulgare WSH-001]
 gi|343463624|gb|AEM42059.1| 3-demethylubiquinone-9 3-methyltransferase [Ketogulonicigenium
           vulgare WSH-001]
          Length = 247

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/247 (44%), Positives = 159/247 (64%), Gaps = 9/247 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+AKF A+A  WWD  G +KPLH LNP RL +I + +  HF +D     PF GL
Sbjct: 6   TTIDPAEVAKFEAMAAEWWDPNGKFKPLHMLNPCRLDYITAQIAAHFGRDLSDDLPFAGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAE 219
            ++D+GCGGG+LSEP+AR+GATV G+DA  +NI +A++HA    LD     I+Y   TAE
Sbjct: 66  RLLDIGCGGGLLSEPMARLGATVVGVDAAPRNIPVAKVHAAQVGLD-----IDYRIGTAE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L     +FD V+  EVIEHVADP  F ++   L    G  + ST+NR+ +++A AI+ A
Sbjct: 121 ALAAADEQFDIVLNMEVIEHVADPLGFLRACYDLLKPGGLHICSTLNRTPKSFAMAIVGA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNF 338
           E+++ WLPKGTH W  F+TP EL  +L +A +   +  G V+NP+   WSLS  D+SVN+
Sbjct: 181 EYVMGWLPKGTHDWQRFITPNELYDLLAQARLRAIDRTGMVFNPIAWSWSLSARDLSVNY 240

Query: 339 IAFGTKN 345
           +    ++
Sbjct: 241 VTAAVRD 247


>gi|424886549|ref|ZP_18310157.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393175900|gb|EJC75942.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
          Length = 248

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 159/247 (64%), Gaps = 2/247 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
            A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F  DP SARP 
Sbjct: 4   GARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACENFGHDPKSARPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA+VTG D  EKNI IA  HA       +I+Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGASVTGADPSEKNIGIASTHA--KASGVSIDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI AA
Sbjct: 122 ELAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN++
Sbjct: 182 ENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNYM 241

Query: 340 AFGTKNS 346
               +++
Sbjct: 242 LLAKRHA 248


>gi|217977726|ref|YP_002361873.1| ubiquinone biosynthesis O-methyltransferase [Methylocella
           silvestris BL2]
 gi|254789993|sp|B8EI29.1|UBIG_METSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|217503102|gb|ACK50511.1| ubiquinone biosynthesis O-methyltransferase [Methylocella
           silvestris BL2]
          Length = 256

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 107/255 (41%), Positives = 158/255 (61%), Gaps = 7/255 (2%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR----- 150
            ++ + PSS+   ++A+F  I + WW A+GP   LH LNP R+A++R  + RHFR     
Sbjct: 3   QREEAGPSSVDPEDVARFDRIGEDWWSADGPMAALHKLNPVRVAYLRDLMSRHFRVEGLP 62

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
           +D Y+ RP EGL I+D GCG G+L+EPLAR+GA VT ID   +NI++AR HA+      +
Sbjct: 63  RDRYAPRPLEGLRILDAGCGAGLLAEPLARLGARVTAIDPAPRNIEVARRHAE--KSGLS 120

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           I+Y  TT E L  E   FDAV+A EV+EHV D A F +   AL    G    +T+NR+++
Sbjct: 121 IDYRMTTIEALSGEAATFDAVLAMEVLEHVLDVAGFVRCCGALVRPGGLMFAATLNRTLK 180

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++A AI+ AE++L W P+GTH W  F++P EL   +  A +   +  G V++PL G W L
Sbjct: 181 SFAFAIVGAEYVLGWAPRGTHDWRRFISPRELARAMAAADLSAFDETGVVFDPLQGGWRL 240

Query: 331 SDDISVNFIAFGTKN 345
           + D  +N++   +K 
Sbjct: 241 AHDTDINYMMAASKR 255


>gi|423711135|ref|ZP_17685455.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella washoensis
           Sb944nv]
 gi|395415049|gb|EJF81484.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella washoensis
           Sb944nv]
          Length = 248

 Score =  231 bits (588), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F ++P S  PF+ L
Sbjct: 7   TTIDQNEIDHFSRIAAEWWNPKGKFRPLHKFNPTRLAYIREKICLAFNRNPVSLTPFKNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA       +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVIGADAAQTNIEVAKIHA--SQSGLSIDYRTTTAEMLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD ++  EV+EHVAD   F  + + +   +G   IST+NR+ +A+  AI+ AE++
Sbjct: 125 AEGEQFDIILNMEVVEHVADVNLFIAATAKMLKPKGLMFISTLNRTWKAWGLAIVGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL   L +  + V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKNFLLQNDLTVIDEIGITYNPLNDSWNRSKDMDVNYLLLA 244

Query: 343 TKNS 346
            + S
Sbjct: 245 KRPS 248


>gi|357023524|ref|ZP_09085715.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mesorhizobium
           amorphae CCNWGS0123]
 gi|355544638|gb|EHH13723.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mesorhizobium
           amorphae CCNWGS0123]
          Length = 249

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 152/245 (62%), Gaps = 4/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ +FSA+A  WW+  G ++PLH  NP RL++IR  +   F +DP +ARPFEGL
Sbjct: 7   STIDAGEVERFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDQVAARFGRDPRAARPFEGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKL 221
             +D+GCGGG+L EP+AR+GA V G DA   NI++A+LHA    E   +++Y  TTAE L
Sbjct: 67  RFLDIGCGGGLLCEPMARLGAEVVGADASATNIEVAKLHA---AEVGVSVDYRATTAEDL 123

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +    FD ++  EV+EHVAD   F      +    G   ++TINR+++A   AII AE+
Sbjct: 124 ADAGETFDVILNMEVVEHVADIDLFVAKCGQMVKPGGIMFVATINRTLKALGLAIIGAEY 183

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L WLP+GTHQ+   + PEEL   L  A + V +  G VY+PL  RW  S D+ VN++  
Sbjct: 184 VLRWLPRGTHQFGKLVRPEELEKALGTAGMSVIDRTGVVYHPLADRWQRSKDMDVNYMVL 243

Query: 342 GTKNS 346
             K S
Sbjct: 244 AEKGS 248


>gi|126724620|ref|ZP_01740463.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacterales
           bacterium HTCC2150]
 gi|126705784|gb|EBA04874.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacteraceae
           bacterium HTCC2150]
          Length = 247

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 108/243 (44%), Positives = 155/243 (63%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+AKF A+AD WWD  G +KPLH LNP RL +I   +   F +D     PF GL
Sbjct: 4   NTVDPAEIAKFQAMADEWWDPNGKFKPLHHLNPCRLDYITRQIEAEFDRDLTQPSPFSGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA ++N+ IARLHA  +    TI+Y  TTAE + 
Sbjct: 64  RILDIGCGGGLLSEPMARLGADVVGADAADRNLPIARLHA--EQSGLTIDYRHTTAEAMA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            +  +FD V+  EV+EHVADP  +  +   L    G  + ST+NR+ +++  AI+ AE++
Sbjct: 122 ADGEQFDVVLNMEVVEHVADPLAYLTACQQLLKPGGMMICSTLNRTAKSFVFAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           + WLPKGTH+W  F+ P+EL  +L  A +   +  G V NP+   W LS+ D+SVN++  
Sbjct: 182 MRWLPKGTHEWDKFIKPDELFELLTGAQLSPVDRRGMVLNPVRWEWQLSERDLSVNYVTT 241

Query: 342 GTK 344
             K
Sbjct: 242 SLK 244


>gi|395780244|ref|ZP_10460711.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella washoensis
           085-0475]
 gi|395419511|gb|EJF85811.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella washoensis
           085-0475]
          Length = 248

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 105/244 (43%), Positives = 155/244 (63%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F ++P S  PF+ L
Sbjct: 7   TTIDQNEIDHFSRIAAEWWNPKGKFRPLHKFNPTRLAYIREKICLAFNRNPVSLTPFKNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+AR+GATV G DA + NI++A++HA       +I+Y  TTAE L 
Sbjct: 67  KILDIGCGGGLLCEPMARLGATVIGADAAQTNIEVAKIHA--SQSGLSIDYRTTTAEVLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD ++  EV+EHVAD   F  + + +   +G   IST+NR+ +A+  AI+ AE++
Sbjct: 125 AEGEQFDIILNMEVVEHVADVNLFIAATAKMLKPKGLMFISTLNRTWKAWGLAIVGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL   L +  + V +  G  YNPL   W+ S D+ VN++   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELKNFLLQNDLTVIDEIGITYNPLNDSWNRSKDMDVNYLLLA 244

Query: 343 TKNS 346
            + S
Sbjct: 245 KRPS 248


>gi|209551103|ref|YP_002283020.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226725557|sp|B5ZRR7.1|UBIG_RHILW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|209536859|gb|ACI56794.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 252

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 111/248 (44%), Positives = 159/248 (64%), Gaps = 2/248 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G ++PLH  NP RL +IR   C +F +DP SARP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLTYIRDKACENFGRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGATVTG D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGATVTGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTKNS 346
           +    +++
Sbjct: 241 MLLAKRSA 248


>gi|240850051|ref|YP_002971444.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii
           as4aup]
 gi|240267174|gb|ACS50762.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii
           as4aup]
          Length = 247

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 155/245 (63%), Gaps = 8/245 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F + P S  PF+ L
Sbjct: 7   TTIDQSEIDHFSRIATEWWNPQGKFRPLHQFNPTRLAYIREKICLEFNRAPCSFTPFDNL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAE 219
            I+D+GCGGG+L EP+AR+GA V G+DA + NI++A+ HA   DL     +I+Y   TAE
Sbjct: 67  KILDIGCGGGLLCEPMARLGAMVVGVDAAQTNIEVAKTHAAQNDL-----SIDYRTMTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L  E  KFD ++  EV+EHVAD   F  + + +   +G   +ST+NR+ +++  AI+ A
Sbjct: 122 ALANEGEKFDIILNMEVVEHVADVNLFIAATAKMLKPQGLMFVSTLNRTWKSWGLAIVGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL WLPKGTH +  FL P EL   L + ++ V +  G  YNPL   W+ S D+SVN++
Sbjct: 182 EYILRWLPKGTHDYKKFLKPLELKSFLSKNALTVIDEIGITYNPLNDSWNRSKDMSVNYL 241

Query: 340 AFGTK 344
               +
Sbjct: 242 LLAKR 246


>gi|146337707|ref|YP_001202755.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp. ORS
           278]
 gi|166234761|sp|A4YKT6.1|UBIG_BRASO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|146190513|emb|CAL74512.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           ORS 278]
          Length = 253

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 159/248 (64%), Gaps = 3/248 (1%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           ++ + + +  S++  AE+AKFS +++TWWD +G   PLH +NP RL +IR   CR F ++
Sbjct: 3   MSQDSRSTPGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERN 62

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
             S     GL ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+
Sbjct: 63  AKSLNCLSGLRMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAE--KGHMSID 120

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y CTT E++ + + +FD V+A EV+EHV D   F    +A+    G  V+ST+NR+ +++
Sbjct: 121 YRCTTIEEM-DPRERFDIVLAMEVVEHVTDVGAFLGRCAAVLKPGGLMVVSTLNRNWKSF 179

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE++L WLP+GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS 
Sbjct: 180 ALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSS 239

Query: 333 DISVNFIA 340
           D+ VN++ 
Sbjct: 240 DMDVNYMV 247


>gi|456358588|dbj|BAM93033.1| 3-demethylubiquinone-9 3-O-methyltransferase [Agromonas
           oligotrophica S58]
          Length = 254

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 108/248 (43%), Positives = 159/248 (64%), Gaps = 5/248 (2%)

Query: 94  NNNKKHSAPS--SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
            +++  S PS  ++  AE+AKFS +++TWWD +    PLH +NP RL +IR   CR F +
Sbjct: 3   QDSRSTSVPSGSTVDPAEIAKFSKLSETWWDPKDKMAPLHKINPLRLTYIRDAACRKFER 62

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
           +  S     GL ++D+GCG G+L EP  R+GA V G+D    NI  ARLHA+      +I
Sbjct: 63  NAKSLNCLSGLRMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAARLHAE--KGHLSI 120

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           +Y CTT E++ + + +FD V+A EV+EHVAD   F    +A+    G  V+ST+NR+ ++
Sbjct: 121 DYRCTTIEEM-DPRERFDIVLAMEVVEHVADIGAFLGRCAAVLKPGGMMVVSTLNRNWKS 179

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +A AI+ AE++L WLP+GTHQWS F+TP+EL   L    + + E +G VY+P   RWSLS
Sbjct: 180 FALAIVGAEYVLRWLPRGTHQWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLS 239

Query: 332 DDISVNFI 339
            D+ VN++
Sbjct: 240 SDMDVNYM 247


>gi|241206505|ref|YP_002977601.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240860395|gb|ACS58062.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 248

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 111/248 (44%), Positives = 159/248 (64%), Gaps = 2/248 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RL++IR   C +F +DP SARP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLSYIRDKACENFSRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELTEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLVASGLEISDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTKNS 346
           +    +++
Sbjct: 241 MLLAKRSA 248


>gi|312115448|ref|YP_004013044.1| ubiquinone biosynthesis O-methyltransferase [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220577|gb|ADP71945.1| ubiquinone biosynthesis O-methyltransferase [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 252

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 116/241 (48%), Positives = 154/241 (63%), Gaps = 5/241 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA-RPFEGL 162
           SL   EL  F ++A  WWD  G +  LHA NP RLAFI + + R +RK  ++  RP +GL
Sbjct: 12  SLDATELRHFESLAKEWWDERGKFSGLHAFNPARLAFIVAEVKR-WRKGQFNEFRPLQGL 70

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++VD+GCGGGILSEPLAR+G TVTGID VE+++ +AR HA      + + Y   TAE L 
Sbjct: 71  DVVDIGCGGGILSEPLARLGGTVTGIDPVEESVGVARAHAA--KLGAPVTYRNVTAEDLA 128

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E   FD V+ASEVIEHVADP  F K+  +L    G  V+ST+NR+ ++Y  A+ AAE I
Sbjct: 129 REGLTFDVVVASEVIEHVADPQSFLKTCRSLAKPGGLIVLSTLNRTSKSYGLAVFAAERI 188

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAF 341
           L  +P GTH W  F+ P+EL   L  A       AG +Y PL+G W+LSD D+S+N++  
Sbjct: 189 LGLVPPGTHDWKKFIKPDELAGALSDAGFAATRRAGMIYKPLSGSWTLSDTDLSMNYLMS 248

Query: 342 G 342
           G
Sbjct: 249 G 249


>gi|365879434|ref|ZP_09418857.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           ORS 375]
 gi|365292618|emb|CCD91388.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           ORS 375]
          Length = 251

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 160/247 (64%), Gaps = 3/247 (1%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +  + + ++ S++  AE+AKFS +++TWWD +G   PLH +NP RL +IR   CR F ++
Sbjct: 1   MPQDSRSTSGSTVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERN 60

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
             S     GL ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+
Sbjct: 61  AKSLNCLSGLRMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAE--KGHLSID 118

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y CTT E++ + + +FD V+A EV+EHV D + F    +A+    G  V+ST+NR+ +++
Sbjct: 119 YRCTTIEEM-DPRERFDIVLAMEVVEHVTDVSAFLGRCAAVLKPGGLMVVSTLNRNWKSF 177

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A AI+ AE++L WLP+GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS 
Sbjct: 178 ALAIVGAEYVLRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSG 237

Query: 333 DISVNFI 339
           D+ VN++
Sbjct: 238 DMDVNYM 244


>gi|407976871|ref|ZP_11157767.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           indicus C115]
 gi|407427770|gb|EKF40458.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           indicus C115]
          Length = 249

 Score =  229 bits (584), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 106/239 (44%), Positives = 153/239 (64%), Gaps = 8/239 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  FSA+A  WW+  G +  LH  NP RLA+IR  +  HF +DP++A+PF+ L ++D+G
Sbjct: 13  EIEHFSALAAEWWNPTGKFGVLHKFNPVRLAYIRDHIAAHFGRDPHAAKPFDNLRLLDIG 72

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAEKLVEEQ 225
           CGGG+L EP+AR+GA V G DA E NI++A++HA    LD     I+Y  TTAE L ++ 
Sbjct: 73  CGGGLLCEPMARLGAQVVGADASETNIEVAKIHAAQSGLD-----IDYRATTAEALADQG 127

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            KFD ++  EV+EHVAD   F      +    G   ++TINR+++A+  AII AE++L W
Sbjct: 128 EKFDIILNMEVVEHVADVNLFLSKCGEMLKPGGLMFVATINRTLKAWGLAIIGAEYVLGW 187

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           LP+GTHQ+   + P+EL   L  A + + + +G VYNPL  RW  S D+ VN++   TK
Sbjct: 188 LPRGTHQYDKLVRPQELEKALGAAGVLITDRSGVVYNPLADRWQRSGDMDVNYMVAATK 246


>gi|297182763|gb|ADI18917.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured SAR11 cluster bacterium HF0010_09O16]
          Length = 242

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 158/238 (66%), Gaps = 4/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KFS IA+ WWD  G +KPLH  NP R+++I+  +   F+ +  S +P + +
Sbjct: 4   STINKKEIEKFSRIAEEWWDPTGKFKPLHKFNPIRISYIKEKIISSFKLEN-SDKPLQKI 62

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP++R+GA VTGIDA EKNI++A+LHA        I Y   + E L 
Sbjct: 63  RLLDIGCGGGLLSEPMSRLGAEVTGIDASEKNIQVAKLHAK--KNNLKINYLAASPENL- 119

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  RKFD ++  E+IEHV D   F KS S+L   EG   ++TIN+++++Y  AII AE+I
Sbjct: 120 KIDRKFDVILNMEIIEHVEDVDFFLKSCSSLLKKEGIMFVATINKTLKSYLFAIIGAEYI 179

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           L WLP GTH+W  F+ P +L+ I ++ ++ ++ + G  +N +T +WS+S D S+N+I 
Sbjct: 180 LRWLPIGTHEWDKFIDPNDLIKISKKYNLQLQNLDGMKFNIITDKWSISSDKSINYIG 237


>gi|116254022|ref|YP_769860.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|166234773|sp|Q1MBA9.1|UBIG_RHIL3 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|115258670|emb|CAK09774.1| putative 3-demethylubiquinone-9 3-methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 248

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/246 (45%), Positives = 156/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP SARP
Sbjct: 3   EGAKSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACENFSRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EGLAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEEPLVASGLEITDRTGVSFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|303275902|ref|XP_003057245.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461597|gb|EEH58890.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 366

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/296 (42%), Positives = 164/296 (55%), Gaps = 60/296 (20%)

Query: 109 ELAKFSAIADTWWDA-EGPYKPLHALNPTRLAFIRSTLCRHFRKD--------------- 152
           E  KF   A  WW+  EGP+ PLHA+NP RL FIR  L  HF+ D               
Sbjct: 69  ETEKFERDAALWWNEREGPFAPLHAMNPARLGFIRDVLVNHFQGDVEGGIGISRANRGVE 128

Query: 153 ---------------------------PYSA------RPFEGLNIVDVGCGGGILSEPLA 179
                                      P SA      RP  GL ++DVGCGGGIL E LA
Sbjct: 129 GISRAAGSGSGSASGSGSGSGSGSTRSPPSADAARDARPLAGLRVLDVGCGGGILCESLA 188

Query: 180 RMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKLVEEQRKFDAVIASEVIE 238
           RMGA VTGIDA ++NI IA+ HA LDP   + I Y    AE+L+     FDAV++ EV+E
Sbjct: 189 RMGADVTGIDAGKRNIDIAKKHASLDPAIDAKITYHAAPAEELLASGASFDAVLSMEVVE 248

Query: 239 HVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLT 298
           HV +P  F KSL  LT   GA V+ST+NR+ R+YA AI+AAE I+ W+P GTH++  FLT
Sbjct: 249 HVDNPETFVKSLHGLTRPGGAVVMSTLNRTARSYALAIVAAERIMGWVPPGTHEFGKFLT 308

Query: 299 PEELVLILQRASIDVKEMAGFVYNPLT---------GRWSLS-DDISVNFIAFGTK 344
           PEEL ++ +RA + ++E AG  Y P           G WSLS  D++VN+I + ++
Sbjct: 309 PEELTVLFRRAGLTLREAAGMRYTPGVPLIGGGLKGGSWSLSAGDLAVNYIVYASR 364


>gi|424897198|ref|ZP_18320772.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
 gi|393181425|gb|EJC81464.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
          Length = 248

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/240 (46%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
            A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F  DP SARP 
Sbjct: 4   GARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACENFGHDPKSARPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA+VTG D  EKNI IA  HA  +    +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGASVTGADPSEKNIGIASTHA--NASGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L      FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI AA
Sbjct: 122 ELAGAGETFDIVLNMEVVEHVADVEFFITTCAKMVRPGGLIFVATINRTMKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN++
Sbjct: 182 ENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWTLSKDMDVNYM 241


>gi|365900749|ref|ZP_09438611.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           STM 3843]
 gi|365418510|emb|CCE11153.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           STM 3843]
          Length = 256

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/232 (45%), Positives = 154/232 (66%), Gaps = 3/232 (1%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKFS +++TWWD +G   PLH +NP RLA+IR   CR F ++  S     GL ++D+
Sbjct: 21  AEIAKFSKLSETWWDPKGKMAPLHKINPLRLAYIRDAACRKFARNAKSLNCLSGLRMLDI 80

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+Y CTT E++ + + +
Sbjct: 81  GCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAE--KGHLSIDYRCTTIEEM-DPRER 137

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+A EV+EHVAD + F    +A+    G  V+ST+NR+ +++A AI+ AE++L WLP
Sbjct: 138 FDIVLAMEVVEHVADVSGFLGRCAAVLKPGGMMVVSTLNRNWKSFALAIVGAEYVLRWLP 197

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTHQW+ F+TP+EL   L    + V E +G +Y+P   RWSLS D+ VN++
Sbjct: 198 RGTHQWNKFVTPDELTKHLLDNRLVVTEQSGVIYSPFADRWSLSSDMDVNYM 249


>gi|417097189|ref|ZP_11959101.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
           CNPAF512]
 gi|327193406|gb|EGE60306.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
           CNPAF512]
          Length = 248

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/246 (45%), Positives = 156/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP S RP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACANFGRDPKSPRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHAKAS--GVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLLFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQWNLSRDMDVNY 240

Query: 339 IAFGTK 344
           +  G +
Sbjct: 241 MLLGKR 246


>gi|254440624|ref|ZP_05054118.1| 3-demethylubiquinone-9 3-methyltransferase [Octadecabacter
           antarcticus 307]
 gi|198256070|gb|EDY80384.1| 3-demethylubiquinone-9 3-methyltransferase [Octadecabacter
           antarcticus 307]
          Length = 248

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 162/242 (66%), Gaps = 3/242 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +  +++  AE+AKF A+A  WWD EG +KPLH LNPTRL +I   +   F ++  + +P
Sbjct: 2   QTTQTTVDPAEIAKFEAMAAEWWDLEGKFKPLHMLNPTRLDYITRQIAAEFDRNLMADKP 61

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F+GL I+D+GCGGG+L EP+AR+GA + G DA E+NI +A++HA  +     I+Y  TTA
Sbjct: 62  FDGLRILDIGCGGGLLCEPMARLGAVIVGADAAERNIPVAQVHA--EQSGLDIDYRFTTA 119

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E +  +   FD V+  EV+EHVA+P  +  +   L   EG  + STINR+ +++A AI  
Sbjct: 120 EDMAADGELFDIVLNMEVVEHVANPLSYLTACQQLLKPEGLHICSTINRNPKSFAMAIFG 179

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AE+++ WLPKGTH ++ F+TP+EL  +L++A ++  +  GF ++ L   WS+SD D+SVN
Sbjct: 180 AEYVMRWLPKGTHVFNKFITPDELFALLEQAGLNPVDRKGFKFDFLGWSWSISDSDLSVN 239

Query: 338 FI 339
           ++
Sbjct: 240 YV 241


>gi|329888696|ref|ZP_08267294.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas
           diminuta ATCC 11568]
 gi|328847252|gb|EGF96814.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas
           diminuta ATCC 11568]
          Length = 272

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 152/247 (61%), Gaps = 9/247 (3%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  A++A+FSA A  WWD +GP+ PLH  NP RL F+R    +HF +D  +  PF GL+
Sbjct: 31  SIDPADVARFSAQAAEWWDPKGPFAPLHRFNPARLKFVRDRAAKHFDRDVKARAPFSGLS 90

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEK 220
           ++D+GCGGG+++EP+ RMG  VT IDA  +NI  AR HAD   LD     I Y   T E+
Sbjct: 91  LIDIGCGGGLIAEPMRRMGFEVTAIDASSENIGTARAHADQVGLD-----IAYRAATVEQ 145

Query: 221 LVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +VE     FD V+  EVIEHVADP  F ++ S L    G  +++T+NR+++      +AA
Sbjct: 146 MVEAGAGPFDVVLTMEVIEHVADPESFIRACSKLIKPGGLMIVATLNRTLKGLLLGKVAA 205

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L W+P GTH W  FL P+EL  +L    + V    G  Y+PL  RWS  DD+ +N++
Sbjct: 206 EYVLRWVPAGTHDWRQFLKPDELRAMLDGEPLTVTGPYGLTYDPLNDRWSEGDDVGINYM 265

Query: 340 AFGTKNS 346
              T+++
Sbjct: 266 MMATRDA 272


>gi|395791358|ref|ZP_10470816.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella alsatica IBS
           382]
 gi|395408721|gb|EJF75331.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella alsatica IBS
           382]
          Length = 248

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 153/237 (64%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   EL  FS IA  WW+ +G ++PLH  NPTRLA+IR  +C  F ++P S  PFE L
Sbjct: 7   STIDQNELDHFSRIAAEWWNPQGKFRPLHQFNPTRLAYIREKICLEFNRNPVSLMPFENL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EP+A++GA V G DA   NI++A++HA  +    +I+Y  TTAE L 
Sbjct: 67  RILDIGCGGGLLCEPMAQLGAIVVGADAAPTNIEVAKIHAFQN--GFSIDYRTTTAEVLA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  KFD ++  EV+EHVAD   F  + + +   +G   +ST+NR+ +A+  AI+ AE++
Sbjct: 125 AEGEKFDIILNMEVVEHVADVNLFIAATAKMLKPKGLMFVSTLNRTWKAWGLAIVGAEYV 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLPKGTH +  FL P EL  +L + ++ V +  G  YNPL   W+ S ++ VN++
Sbjct: 185 LRWLPKGTHDYKKFLKPRELKNLLLQNALTVVDEIGITYNPLNDSWNRSKNMDVNYL 241


>gi|86359343|ref|YP_471235.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CFN 42]
 gi|109895911|sp|Q2K3S8.1|UBIG_RHIEC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|86283445|gb|ABC92508.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
           CFN 42]
          Length = 248

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 111/246 (45%), Positives = 155/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RL +IR   C +F +DP SARP
Sbjct: 3   EGARSTIDQGEVNRFSAMAAEWWSPTGKFKPLHKFNPVRLGYIRDKACENFGRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELAEAGETFDIVLNMEVVEHVADVELFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQWKLSRDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|148258768|ref|YP_001243353.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp.
           BTAi1]
 gi|146410941|gb|ABQ39447.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp.
           BTAi1]
          Length = 254

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 153/238 (64%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS +++TWWD +G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 14  STVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGL 73

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V G+D    NI  ARLHA+      +I+Y CTT E + 
Sbjct: 74  RMLDIGCGAGLLCEPFTRLGAQVVGVDPSPSNIVAARLHAE--KGHLSIDYRCTTIEDM- 130

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D   F    +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 131 DPRERFDIVLAMEVVEHVTDVGAFLSRCAAVLKPGGMMVVSTLNRNWKSFALAIVGAEYV 190

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           L WLP+GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS D+ VN++ 
Sbjct: 191 LRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSTDMDVNYMV 248


>gi|222087306|ref|YP_002545843.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium
           radiobacter K84]
 gi|254789984|sp|B9JB78.1|UBIG_AGRRK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|221724754|gb|ACM27910.1| 3-demethylubiquinone-9 3-methyltransferase protein [Agrobacterium
           radiobacter K84]
          Length = 248

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/245 (45%), Positives = 156/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A S++  +E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP SARP 
Sbjct: 4   AAKSTIDQSEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDHACENFGRDPKSARPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA      + ++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGAPVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI AA
Sbjct: 122 QLAEAGETFDIVLNMEVVEHVADVEFFLTTCAKMVRPGGLMYVATINRTMKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEE+   L    +D+    G  Y+PL  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEEIEKPLAADGLDIIARTGVFYSPLQDRWNLSKDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 LLAKR 246


>gi|222149917|ref|YP_002550874.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium vitis S4]
 gi|221736899|gb|ACM37862.1| ubiquinone biosynthesis O-methyltransferase [Agrobacterium vitis
           S4]
          Length = 260

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/254 (44%), Positives = 161/254 (63%), Gaps = 5/254 (1%)

Query: 89  NHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH 148
            HSQ  N    +A S++  AE+ +FSA+A  WWD  G +KPLH +NP RLA+IR   C +
Sbjct: 2   QHSQ-ENPMSETAKSTIDQAEVDRFSAMAAEWWDPTGKFKPLHKINPVRLAYIRDKACEN 60

Query: 149 FRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET 208
           +++DP S +P  GL ++D+GCGGG+LSEP+ARMGA V G DA  KNI IA+ HA    +T
Sbjct: 61  YQRDPRSNQPLSGLRVLDIGCGGGLLSEPIARMGADVLGADASAKNIGIAQTHA---AQT 117

Query: 209 S-TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINR 267
             +++Y   TAE L      FD V+  EV+EHVAD   F  + +++    G  +ISTINR
Sbjct: 118 GVSVDYRAVTAEALAAAGESFDIVLNMEVVEHVADVEYFISTCASMVRPGGIMLISTINR 177

Query: 268 SMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGR 327
           +++A A AI A E++L WLP+GTHQ+   + PEEL   +  A ++V E  G  +NP   +
Sbjct: 178 TLKAAALAIGACEYVLRWLPRGTHQYEKLVRPEELEKPILGAGMNVSETVGVFFNPFQNQ 237

Query: 328 WSLSDDISVNFIAF 341
           W+LS D  VN++  
Sbjct: 238 WNLSTDTDVNYMML 251


>gi|163759880|ref|ZP_02166964.1| 3-demethylubiquinone-9 3-methyltransferase [Hoeflea phototrophica
           DFL-43]
 gi|162282838|gb|EDQ33125.1| 3-demethylubiquinone-9 3-methyltransferase [Hoeflea phototrophica
           DFL-43]
          Length = 250

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 154/245 (62%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++   E+ +FSA+A  WW+  G ++PLH  NP RL++IR  +  HF +DP S +P 
Sbjct: 4   AARTTIDQGEVDRFSALAAEWWNPNGKFRPLHKFNPVRLSYIRDHVASHFGRDPKSDKPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+L EP+ARMGA V G DA E N+++A +HA        + Y   T+E
Sbjct: 64  EGLRLLDIGCGGGLLCEPMARMGAQVLGADASETNVEVASIHA--RQSGLPVTYEAVTSE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L     +FD V+  EV+EHVAD   F  S + +    G   ++TINR+M+A A AI+ A
Sbjct: 122 ELAARGERFDVVLNMEVVEHVADVGLFLDSCAEMVKPGGLMFVATINRTMKAMALAIVGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEE+   L  + + + +  G  YNPL  +W+LS D+ VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEEIEGPLSASGMTIIDRTGVFYNPLQDKWNLSRDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MLAER 246


>gi|429767942|ref|ZP_19300121.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas
           diminuta 470-4]
 gi|429189653|gb|EKY30477.1| 3-demethylubiquinone-9 3-O-methyltransferase [Brevundimonas
           diminuta 470-4]
          Length = 276

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 151/245 (61%), Gaps = 9/245 (3%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  A++A+FSA A  WWD +GP+ PLH  NP RL F+R  +  HF++D  +  PF GL+
Sbjct: 35  SIDPADVARFSAQAAEWWDPKGPFAPLHRFNPARLKFVRDRVAEHFQRDVRARAPFSGLS 94

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEK 220
           ++D+GCGGG+++EP+ RMG  VT IDA  +NI  AR HAD   LD     I Y   T E+
Sbjct: 95  LIDIGCGGGLIAEPMRRMGFDVTAIDASSENIGTARAHADQVGLD-----IAYRAATVEQ 149

Query: 221 LVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +VE     FD V+  EVIEHVADP  F ++ S L    G  +++T+NR+++      +AA
Sbjct: 150 IVEAGAGPFDVVLTMEVIEHVADPEAFIRACSKLIKPGGLMIVATLNRTLKGLLLGKVAA 209

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L W+P GTH W  FL P+EL  +L    + V    G  Y+PL  RWS  DD+ +N++
Sbjct: 210 EYVLRWVPAGTHDWRQFLKPDELRAMLDGEPLTVTGPYGLAYDPLNDRWSEGDDVGINYM 269

Query: 340 AFGTK 344
              T+
Sbjct: 270 MMATR 274


>gi|365887819|ref|ZP_09426636.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           STM 3809]
 gi|365336572|emb|CCD99167.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           STM 3809]
          Length = 254

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 155/238 (65%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS +++TWWD +G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 14  STVDPAEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGL 73

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+Y CTT E++ 
Sbjct: 74  RMLDIGCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAE--KGHLSIDYRCTTIEEM- 130

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D + F    +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 131 DPRERFDIVLAMEVVEHVTDVSAFLGRCAAVLKPGGLMVVSTLNRNWKSFALAIVGAEYV 190

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           L WLP+GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS D+ VN++ 
Sbjct: 191 LRWLPRGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSGDMDVNYMV 248


>gi|417862162|ref|ZP_12507215.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium
           tumefaciens F2]
 gi|338820566|gb|EGP54537.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium
           tumefaciens F2]
          Length = 294

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 112/275 (40%), Positives = 163/275 (59%), Gaps = 5/275 (1%)

Query: 72  STAIDSASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLH 131
           +T +D    S   N     S+       +A +++  +E+ +FSA+A  WW   G ++PLH
Sbjct: 25  TTGLDFGGQSSDFNATAIWSR---TMSETAKTTVDQSEVDRFSAMAAEWWSPTGKFRPLH 81

Query: 132 ALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAV 191
             NP RL +IR+ +C +F +DP + RP EGL ++D+GCGGG+LSEP+ARMGA V G D  
Sbjct: 82  KFNPVRLEYIRNRICDNFGRDPKAHRPLEGLRVLDIGCGGGLLSEPVARMGADVVGADPS 141

Query: 192 EKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLS 251
           EKNI IA  HA       T++Y   TAE+L+E    FD V+  EV+EHVA+   F  + +
Sbjct: 142 EKNIGIASTHA--RESGVTVDYRAVTAEQLLEAGETFDVVLNMEVVEHVANVDLFVTTCA 199

Query: 252 ALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASI 311
            +    G    +TINR+++A A AI AAE++L WLP+GTHQ+   + PEEL   L  + +
Sbjct: 200 KMVRPGGLMFAATINRTLKARALAIFAAENVLRWLPRGTHQYEKLVRPEELERPLVASGM 259

Query: 312 DVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           D+    G  YN L   W+LS D+ VN++    + S
Sbjct: 260 DIVHRTGVFYNVLQDSWNLSPDMDVNYMMLAKRPS 294


>gi|440228052|ref|YP_007335143.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhizobium tropici
           CIAT 899]
 gi|440039563|gb|AGB72597.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rhizobium tropici
           CIAT 899]
          Length = 250

 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 109/246 (44%), Positives = 157/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A S++  +E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP S++P
Sbjct: 3   ETAKSTIDQSEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDRACENFDRDPKSSKP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVIGADPSEKNIGIASTHA--KASGVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +   +G   ++TINR+M+A A AI A
Sbjct: 121 EQLAEAGETFDIVLNMEVVEHVADVEFFLSTCAKMVRPDGLMFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLP+GTHQ+   + PEE+   L  + +++    G  Y+PL  RW+LS D+ VN+
Sbjct: 181 AENVLRWLPRGTHQYEKLVRPEEIEKPLAASGLEITARTGVFYSPLQDRWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|418299031|ref|ZP_12910867.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           tumefaciens CCNWGS0286]
 gi|355535760|gb|EHH05043.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           tumefaciens CCNWGS0286]
          Length = 250

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 106/245 (43%), Positives = 154/245 (62%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WW   G ++PLH  NP RL +IR+ +C +F +DP + RP 
Sbjct: 4   TAQTTVDQSEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLEYIRNRICDNFGRDPKAHRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL I+D+GCGGG+LSEP+ARMGA V G D  EKNI IA  HA       +++Y   TAE
Sbjct: 64  EGLRILDIGCGGGLLSEPVARMGADVVGADPSEKNIGIASTHA--RESGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD ++  EV+EHVA+   F  + + +    G    +TINR+++A A AI AA
Sbjct: 122 QLQEAGETFDVILNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L  + +D+    G  YN L  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELERPLVASGMDIIHRTGVFYNVLQDRWNLSPDMEVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MLAKR 246


>gi|254500431|ref|ZP_05112582.1| 3-demethylubiquinone-9 3-methyltransferase [Labrenzia alexandrii
           DFL-11]
 gi|222436502|gb|EEE43181.1| 3-demethylubiquinone-9 3-methyltransferase [Labrenzia alexandrii
           DFL-11]
          Length = 265

 Score =  227 bits (578), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 107/231 (46%), Positives = 151/231 (65%), Gaps = 2/231 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+FSA+AD WWD  G +KPLH  NP RL++I+  +CR F +DP S   F+GL  +D+G
Sbjct: 28  EVARFSALADQWWDPTGKFKPLHKFNPVRLSYIKQEVCRQFDRDPNSPDAFKGLRFLDIG 87

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSEP+AR+GA V G DA E NI++A+LH  +      I+Y   TAE L E   KF
Sbjct: 88  CGGGLLSEPMARLGADVVGADASETNIEVAKLH--MQSSGLDIDYRAETAEALAEAGEKF 145

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHVAD   F  + S +    G   ++TINR+M+AYA AI+ AE++L WLPK
Sbjct: 146 DVVLNMEVVEHVADVPLFLNATSQMVRPGGLMFVATINRTMKAYALAIVGAEYVLRWLPK 205

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH +   + P E+   L  A + + + +G  +NP+T  W+ S D+ VN++
Sbjct: 206 GTHSYEKLVKPSEIESPLNAAGLTIIDRSGVSFNPITDTWARSRDMDVNYM 256


>gi|424913206|ref|ZP_18336580.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|392844363|gb|EJA96886.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
          Length = 250

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WW   G ++PLH  NP RL +IR+ +C +F +DP + RP 
Sbjct: 4   TAQTTVDQSEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLEYIRNRICDNFGRDPKAHRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G D  EKNI IA  HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGADVVGADPSEKNIGIASTHA--RESGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD ++  EV+EHVA+   F  + + +    G    +TINR+++A A AI AA
Sbjct: 122 QLQEAGETFDVILNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L  + +D+    G  YN L  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELERPLVASGMDIIHRTGVFYNVLQDRWNLSPDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MLAKR 246


>gi|297183480|gb|ADI19611.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured SAR11 cluster bacterium HF0770_37D02]
          Length = 241

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 153/243 (62%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WW+  G +KPLH  NPTR+ FI+  L  HF  DP +  P + +
Sbjct: 2   TTIDKTEVEKFSKLAKDWWNPSGKFKPLHLFNPTRIKFIKEKLIYHFGLDPKTQEPLKKI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+L EPL R+GATVTGIDA + NI++ARLHA       +I Y   + E L 
Sbjct: 62  NILDIGCGGGLLCEPLKRLGATVTGIDASKNNIEVARLHA--KEMNLSINYIHCSPEDLT 119

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
             + KFD ++  EVIEHV++   F +  S L    G   ++T+N+++++Y  AI+ AE+ 
Sbjct: 120 -FKNKFDVILNMEVIEHVSNVNLFIQDCSKLIGKNGIMFVATLNKNLKSYIYAILVAEYF 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W+ FLTP+EL +I  + +  + E+ G  +N L  RW  S+D SVN+I   
Sbjct: 179 LRWLPIGTHDWNKFLTPQELEIIATKNNFIIDEVVGMKFNLLLKRWYKSNDPSVNYITTF 238

Query: 343 TKN 345
            KN
Sbjct: 239 LKN 241


>gi|332716307|ref|YP_004443773.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp.
           H13-3]
 gi|418405903|ref|ZP_12979223.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           tumefaciens 5A]
 gi|325062992|gb|ADY66682.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp.
           H13-3]
 gi|358007816|gb|EHK00139.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Agrobacterium
           tumefaciens 5A]
          Length = 248

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 155/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WW   G ++PLH  NP RL +IR+ +C +F +DP + RP 
Sbjct: 4   TAQTTVDQSEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLEYIRNRICDNFGRDPKAHRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G D  EKNI IA  HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGADVVGADPSEKNIGIASTHA--RESGVSVDYRALTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L+E    FD V+  EV+EHVA+   F  + + +    G    +TINR+++A A AI AA
Sbjct: 122 QLLEAGETFDVVLNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + P+EL   L  + +D+    G  YN L  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPDELERPLVASGMDIVHRTGVFYNVLQDRWNLSPDMEVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MLAKR 246


>gi|227823192|ref|YP_002827164.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
           NGR234]
 gi|254789994|sp|C3MHQ9.1|UBIG_RHISN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|227342193|gb|ACP26411.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
           NGR234]
          Length = 248

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 109/240 (45%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RLA+IR  +C  F +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLAYIRDKVCEQFGRDPKSPQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +GL ++D+GCGGG+LSEP+ARMGA V G DA EKNI IAR HA        ++Y   TAE
Sbjct: 64  KGLRLLDIGCGGGLLSEPMARMGADVLGADASEKNIGIARTHA--AGSGVNVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDIVLNMEVVEHVADVDFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L+ + + V +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELEKPLEASGMQVTDRTGVFFNPLANQWNLSKDMDVNYM 241


>gi|407775626|ref|ZP_11122919.1| 3-demethylubiquinone-9 3-methyltransferase [Thalassospira
           profundimaris WP0211]
 gi|407281303|gb|EKF06866.1| 3-demethylubiquinone-9 3-methyltransferase [Thalassospira
           profundimaris WP0211]
          Length = 252

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 156/248 (62%), Gaps = 5/248 (2%)

Query: 100 SAPSS--LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           SAP+S      E+A+FSA+++ WWD  G  KPLH  NP RL  +R  +C H  +DP +  
Sbjct: 5   SAPTSRTANADEIARFSAMSEKWWDPNGVMKPLHKFNPVRLQILRDNICAHLGRDPETIE 64

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           P + + I+D+GCG G+LSEPLARMGA +T IDA E NI++A++HA        I+Y C T
Sbjct: 65  PLKDIEIIDIGCGAGLLSEPLARMGAKMTSIDASESNIEVAKIHA--AQSGLEIDYRCAT 122

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
            E L +E ++FD V+  EVIEHV DP  F ++ +++    G   ++T+NR++++ A A I
Sbjct: 123 PEMLADEGKQFDIVLNMEVIEHVDDPQFFMQACASVLKPGGLMFVATLNRTIKSLALAKI 182

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE++L WLP GTH W  F+ P E+   L+ A +D++++ G  YNP    WS +  D+ V
Sbjct: 183 GAEYVLRWLPAGTHDWRKFVKPSEMSGYLRGAGLDLQDITGVAYNPFNDTWSPAPRDLDV 242

Query: 337 NFIAFGTK 344
           N++    K
Sbjct: 243 NYMVIARK 250


>gi|15891430|ref|NP_357102.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium fabrum
           str. C58]
 gi|335037499|ref|ZP_08530805.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp. ATCC
           31749]
 gi|24418727|sp|Q8UA66.1|UBIG_AGRT5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|15159834|gb|AAK89887.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium fabrum
           str. C58]
 gi|333791164|gb|EGL62555.1| 3-demethylubiquinone-9 3-methyltransferase [Agrobacterium sp. ATCC
           31749]
          Length = 250

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 155/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WW   G ++PLH  NP RL +IR+ +C +F ++P + RP 
Sbjct: 4   TAQTTVDQSEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLEYIRNRVCENFGRNPKAHRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGATV G D  EKNI IA  HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGATVVGADPSEKNIGIASTHA--RESGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD ++  EV+EHVA+   F  + + +    G    +TINR+++A A AI AA
Sbjct: 122 QLQEAGESFDVILNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   +  + +D+    G  YN L  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELERPIVASGMDIIHRTGVFYNVLQDRWNLSPDMEVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MMAKR 246


>gi|408786677|ref|ZP_11198413.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhizobium
           lupini HPC(L)]
 gi|408487637|gb|EKJ95955.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhizobium
           lupini HPC(L)]
          Length = 250

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 154/245 (62%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WW   G ++PLH  NP RL +IR+ +C +F +DP + RP 
Sbjct: 4   TAQTTVDQSEVDRFSAMAAEWWSPTGKFRPLHKFNPVRLEYIRNRICDNFGRDPKAHRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G D  EKNI IA  HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGADVVGADPSEKNIGIASTHA--RESGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD ++  EV+EHVA+   F  + + +    G    +TINR+++A A AI AA
Sbjct: 122 QLREAGETFDVILNMEVVEHVANVDLFVTTCAKMVRPGGLMFAATINRTLKARALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L  + +D+    G  YN L  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELERPLVASGMDIIHRTGVFYNVLQDRWNLSPDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 MLAKR 246


>gi|367472867|ref|ZP_09472440.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           ORS 285]
 gi|365274837|emb|CCD84908.1| 3-demethylubiquinone-9 3-O-methyltransferase [Bradyrhizobium sp.
           ORS 285]
          Length = 256

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 103/232 (44%), Positives = 151/232 (65%), Gaps = 3/232 (1%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKFS +++TWWD +G   PLH +NP RL +IR   CR F ++  S     GL ++D+
Sbjct: 21  AEIAKFSKLSETWWDPKGKMAPLHKINPLRLTYIRDAACRKFERNAKSLNCLSGLRMLDI 80

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+Y CTT E++ + + +
Sbjct: 81  GCGAGLLCEPFTRLGAQVVGVDPSASNIAAAKLHAE--KGHLSIDYRCTTIEEM-DPRER 137

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+A EV+EHV D   F    +A+    G  V+ST+NR+ +++A AI+ AE++L WLP
Sbjct: 138 FDIVLAMEVVEHVTDVGAFLGRCAAVLKPGGLMVVSTLNRNWKSFALAIVGAEYVLRWLP 197

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH+WS F+TP+EL   L    + + E +G VY+P   RWSLS D+ VN++
Sbjct: 198 RGTHEWSKFVTPDELTKYLLDNRLVITEQSGVVYSPFADRWSLSGDMDVNYM 249


>gi|402490000|ref|ZP_10836793.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhizobium sp.
           CCGE 510]
 gi|401811339|gb|EJT03708.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhizobium sp.
           CCGE 510]
          Length = 248

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 108/248 (43%), Positives = 157/248 (63%), Gaps = 2/248 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW+  G +KPLH  NP RL +IR   C +F +DP  ARP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWNPTGKFKPLHKFNPVRLTYIRDKACENFGRDPKGARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            +GL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LDGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELADAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLTASGLEITDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTKNS 346
           +    + +
Sbjct: 241 MLLAKRGA 248


>gi|302381426|ref|YP_003817249.1| ubiquinone biosynthesis O-methyltransferase [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192054|gb|ADK99625.1| ubiquinone biosynthesis O-methyltransferase [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 271

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 111/273 (40%), Positives = 164/273 (60%), Gaps = 9/273 (3%)

Query: 77  SASVSPS----INTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHA 132
           +AS  PS      T ++ + ++ ++   A  S+  A++A+FSA A  WWDA GP+ PLH 
Sbjct: 2   AASTDPSSGRKPQTGQDFADIDADRAEGA--SIDPADVARFSAQAAEWWDARGPFAPLHR 59

Query: 133 LNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVE 192
            NP RL+FIR  +   F +DP     F GL+++D+GCGGG+++EP+ RMG  VT IDA  
Sbjct: 60  FNPARLSFIRDHVADRFLRDPAKREAFAGLSLIDIGCGGGLIAEPMRRMGFAVTAIDASS 119

Query: 193 KNIKIARLHADLDPETSTIEYCCTTAEKL-VEEQRKFDAVIASEVIEHVADPAEFCKSLS 251
           +NI  AR HA    +   I Y   T E++  E    FD V+  E+IEHVADP  F ++ S
Sbjct: 120 ENIGTARAHA--AEQGLDIAYRAATVEQVEAEGAGPFDVVLVLEIIEHVADPESFLRACS 177

Query: 252 ALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASI 311
            L    G  +++T+NR++++ A   +AAE+IL W+P GTH W  F+ P+E+ ++L    +
Sbjct: 178 RLVAPGGILIVATLNRTLKSLALGKVAAEYILRWVPAGTHDWRQFVKPDEIRMMLSAEPV 237

Query: 312 DVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
            V    G VY+PL+ RWS S D  VN++   TK
Sbjct: 238 AVSGPYGLVYSPLSDRWSESADADVNYMMVATK 270


>gi|451940364|ref|YP_007461002.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella australis
           Aust/NH1]
 gi|451899751|gb|AGF74214.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella australis
           Aust/NH1]
          Length = 248

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 107/242 (44%), Positives = 156/242 (64%), Gaps = 2/242 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP S  PF+ L
Sbjct: 7   TTIDQDEIDHFSRIAAEWWNPQGKFRPLHKFNPTRLAYIKEKVCLAFDRDPISLTPFKDL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
             +D+GCGGG+L EP+AR+GATV G+DA + NI+IA+ HA  +     I+Y  TTAE+L 
Sbjct: 67  KFLDIGCGGGLLCEPMARLGATVVGVDAAQANIEIAKSHAAQN--GLLIDYRATTAEELA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E  +FD ++  EV+EHVAD   F  + + +   EG   I+T+NR+ +A+  AII AE+I
Sbjct: 125 NEGEQFDVILNMEVVEHVADVNLFLSATAKMLKPEGLMFIATLNRTWKAWGLAIIGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLPKGTH +  FL P+EL  +L + S+ V +  G  YNPL   W+ S++  VN+I   
Sbjct: 185 LRWLPKGTHDYKKFLKPQELSNLLLKNSLTVIDKIGITYNPLNDSWNRSENTDVNYILLA 244

Query: 343 TK 344
            +
Sbjct: 245 QR 246


>gi|407721682|ref|YP_006841344.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           Rm41]
 gi|407319914|emb|CCM68518.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           Rm41]
          Length = 248

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 157/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RL +IR  +  HF +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLTYIRDKVSEHFGRDPKSRQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G DA EKNI IAR HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPMARMGADVVGADASEKNIGIARTHA--AGSGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDVVLNMEVVEHVADVEFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + P+EL   L+ + +++ +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYDKLVRPDELERPLEASGMEIADRTGVFFNPLANQWNLSRDMDVNYM 241


>gi|91974582|ref|YP_567241.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisB5]
 gi|123166748|sp|Q13EZ9.1|UBIG_RHOPS RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|91681038|gb|ABE37340.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris BisB5]
          Length = 253

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 106/236 (44%), Positives = 150/236 (63%), Gaps = 3/236 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  AE+AKFS ++  WWD  G   PLH +NP R++FIR   CR F ++  S     GL 
Sbjct: 14  SVDPAEIAKFSRLSAEWWDPTGKMAPLHRINPLRISFIRDAACRKFERNAKSLSCLSGLR 73

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCG G+L EP  R+GA V GID    NI  A+LHAD       I+Y CTT E+ ++
Sbjct: 74  MLDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAAKLHAD--KSHLAIDYRCTTVEE-ID 130

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
            + +FD V+A EVIEHV D   F    +AL    G  +++T+NR+ +++A AI+ AE+++
Sbjct: 131 PRERFDIVMAMEVIEHVNDVPAFLGRCAALMKPTGIMLVATLNRNWKSFALAIVGAEYVM 190

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            WLP+GTHQW  F+TP+EL   LQ   + V E +G V+NPL  RW LS D+ VN++
Sbjct: 191 RWLPRGTHQWDKFVTPDELEQHLQGLGLVVTEQSGLVFNPLADRWRLSPDMDVNYM 246


>gi|404316533|ref|ZP_10964466.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Ochrobactrum
           anthropi CTS-325]
          Length = 248

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/245 (43%), Positives = 157/245 (64%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP + RPF
Sbjct: 4   TARTTIDASEIEHFSRIAAEWWNPQGKFRPLHKFNPTRLAYIKEKICAKFNRDPNAPRPF 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+L EP+AR+GATV G DA   NI++A++HA        ++Y  TTAE
Sbjct: 64  EGLRLLDIGCGGGLLCEPMARLGATVIGADASTTNIEVAKIHA--AQSGVEVDYRATTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   KFD V+  EV+EHV+D   F  + S +   +G   ++TINR+++AY  AII A
Sbjct: 122 ALAEAGEKFDVVLNMEVVEHVSDVDLFMSATSEMVKPDGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L +  + + +  G  YNPL   WS S D  VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELEAALAKGGLRLIDKLGVTYNPLADSWSRSRDTDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|398378022|ref|ZP_10536190.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. AP16]
 gi|397725793|gb|EJK86240.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. AP16]
          Length = 248

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/245 (45%), Positives = 155/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A S++  +E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP SARP 
Sbjct: 4   AAKSTIDQSEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDHACENFGRDPKSARPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA        ++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVPVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI AA
Sbjct: 122 QLAEAGETFDIVLNMEVVEHVADVEFFLTTCAKMVRPGGLMYVATINRTMKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEE+   L    +++    G  Y+PL  RW+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEEIEKPLAADGLEIIARTGVFYSPLQDRWNLSKDMDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 LLAKR 246


>gi|406706714|ref|YP_006757067.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           HIMB5]
 gi|406652490|gb|AFS47890.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           HIMB5]
          Length = 240

 Score =  225 bits (573), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 159/243 (65%), Gaps = 4/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A+ WWD EG +KPLH  NP R+ +I+ ++  +F+       P +G+
Sbjct: 2   TTVNKKEIEKFSRLAEEWWDVEGKFKPLHKFNPIRIKYIKESVIENFKLQNNEKLPLDGI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           N++D+GCGGG+LSEP+ R+GATVTGIDA  KNI+IA++HA        I Y CT+ EK+ 
Sbjct: 62  NLLDIGCGGGLLSEPMCRLGATVTGIDASAKNIEIAKIHA--KKNNLNINYICTSPEKIR 119

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E  K+D ++  E++EHV +   F  S S L   +G   ++TIN+++++Y  AII AE+I
Sbjct: 120 KE--KYDVILNMEIVEHVENVDLFLSSSSNLLKKDGLMFVATINKTLKSYLFAIIGAEYI 177

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH+W  F+ P +L  IL +  + + +  G  +NP+  +WSLS D S+N+I+  
Sbjct: 178 LKWLPIGTHEWEKFIKPNDLKNILSKFDLTMIKTDGVKFNPILDKWSLSKDTSINYISKF 237

Query: 343 TKN 345
            KN
Sbjct: 238 IKN 240


>gi|92116095|ref|YP_575824.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter
           hamburgensis X14]
 gi|91798989|gb|ABE61364.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter
           hamburgensis X14]
          Length = 257

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/250 (42%), Positives = 155/250 (62%), Gaps = 5/250 (2%)

Query: 92  QLNNNKKHSAP--SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF 149
           Q+N +   SA   S++  AE+AKFS ++  WWD  G   PLH +NP RL FIR   CR F
Sbjct: 4   QVNPSANSSAAPGSTVDPAEIAKFSKLSQEWWDPNGKMAPLHKINPLRLQFIRDAACRKF 63

Query: 150 RKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS 209
            +   S      L ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      
Sbjct: 64  ERSARSLNCLADLRLLDIGCGAGLLCEPFTRLGAQVIGVDPSATNIAAAKLHAE--KAHL 121

Query: 210 TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
           +I+Y CTT E + + + +FD ++A EV+EHVAD   F    +A+    G  V ST+NR+ 
Sbjct: 122 SIDYRCTTVEDM-DVRERFDIILAMEVVEHVADVGLFLDRCAAMLKPGGMMVASTLNRNW 180

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           +++A  I+AAE++L WLP+GTHQW  F+TP+EL   L+R  + + E +G VY+P   +WS
Sbjct: 181 KSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHLERNRLGITEQSGVVYSPFADKWS 240

Query: 330 LSDDISVNFI 339
           LS D+ VN++
Sbjct: 241 LSSDMGVNYM 250


>gi|153008368|ref|YP_001369583.1| 3-demethylubiquinone-9 3-methyltransferase [Ochrobactrum anthropi
           ATCC 49188]
 gi|166234768|sp|A6WXQ0.1|UBIG_OCHA4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|151560256|gb|ABS13754.1| ubiquinone biosynthesis O-methyltransferase [Ochrobactrum anthropi
           ATCC 49188]
          Length = 248

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 110/248 (44%), Positives = 158/248 (63%), Gaps = 8/248 (3%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP + RPF
Sbjct: 4   TARTTIDASEIEHFSRIAAEWWNPQGKFRPLHKFNPTRLAYIKEKICAKFNRDPNAPRPF 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCT 216
           +GL ++D+GCGGG+L EP+AR+GATV G DA   NI++A++HA    LD     I+Y  T
Sbjct: 64  DGLRLLDIGCGGGLLCEPMARLGATVIGADASTTNIEVAKIHAAQSGLD-----IDYRAT 118

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           TAE L E   KFD V+  EV+EHVAD   F  + S +    G   ++TINR+++AY  AI
Sbjct: 119 TAEALAEAGEKFDVVLNMEVVEHVADVDLFMSATSEMVKPGGLMFVATINRTLKAYGLAI 178

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE++L WLP+GTHQ+   + PEEL   L +  + + +  G  YNPL   WS S D  V
Sbjct: 179 IGAEYVLRWLPRGTHQYEKLVRPEELEAALAKGGLRLIDKLGVTYNPLADSWSRSRDTDV 238

Query: 337 NFIAFGTK 344
           N++    +
Sbjct: 239 NYMVLAER 246


>gi|398831040|ref|ZP_10589219.1| ubiquinone biosynthesis O-methyltransferase [Phyllobacterium sp.
           YR531]
 gi|398212608|gb|EJM99210.1| ubiquinone biosynthesis O-methyltransferase [Phyllobacterium sp.
           YR531]
          Length = 247

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 109/246 (44%), Positives = 156/246 (63%), Gaps = 8/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+ +FS +A  WW+ +G ++PLH  NPTRLA+I+  +C H+  DP + +PF+GL
Sbjct: 7   STIDAAEVERFSRMAAEWWNPQGKFRPLHKFNPTRLAYIKEKVCAHYNLDPNNPQPFKGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAE 219
             +D+GCGGG+L EP+AR+GATV G DA E NI++A++HA    LD     I+Y  TTAE
Sbjct: 67  RFLDIGCGGGLLCEPMARLGATVVGADAGETNIEVAKIHAAQSGLD-----IDYRATTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   KFD V+  EV+EHVAD   +  + S +    G T ++TINR+++A   AI  A
Sbjct: 122 ALAEASEKFDVVLNMEVVEHVADVDLYMSACSQMVKPGGMTFVATINRTLKALGLAIFGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L  A + V E  G  YNP    W+ S D  VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELETALGAAGLTVTEKVGVTYNPFADSWNRSTDTDVNYM 241

Query: 340 AFGTKN 345
               ++
Sbjct: 242 VLAVRS 247


>gi|390452282|ref|ZP_10237829.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           aquibiodomus RA22]
 gi|389659938|gb|EIM71677.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Nitratireductor
           aquibiodomus RA22]
          Length = 249

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/236 (43%), Positives = 149/236 (63%), Gaps = 2/236 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  FSA+A  WW+  G    LH  NP RLA+IR  +  HF +DP++A+PF GL ++D+G
Sbjct: 13  EIEHFSALATEWWNPAGKMGVLHKFNPVRLAYIRDHVAAHFGRDPHAAKPFAGLRMLDIG 72

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+L EP+AR+GA V G DA E NI++A++HA       +I+Y  TTAE L +   +F
Sbjct: 73  CGGGLLCEPMARLGADVVGADASETNIEVAKIHA--GQSGLSIDYRATTAEALADAGERF 130

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D ++  EV+EHV+D   F     A+    G   ++TINR+++A+  AII AE++L WLP+
Sbjct: 131 DIILNMEVVEHVSDVDLFLSKCGAMLKPGGLMFVATINRTLKAWGLAIIGAEYVLGWLPR 190

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTHQ+   + P EL   L    I + + +G VYNP+  RW  S D+ VN++   TK
Sbjct: 191 GTHQYEKLVRPSELEKGLTSTGIKIIDRSGVVYNPIGDRWQRSRDMDVNYMVAATK 246


>gi|167041270|gb|ABZ06026.1| hypothetical protein ALOHA_HF4000005D21ctg1g31 [uncultured marine
           microorganism HF4000_005D21]
 gi|167045775|gb|ABZ10421.1| putative methyltransferase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 241

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 155/243 (63%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+ KFS +A  WW+  G +KPLH  NP R+ FI+  L  +F  DP +  P + +
Sbjct: 2   STVDKSEVEKFSKLASEWWNPNGKFKPLHLFNPARIKFIKEKLVYYFGLDPKAQEPLKKI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+L EPL R+GATVTGIDA +KNI++A+ HA        I Y   + E L 
Sbjct: 62  NILDIGCGGGLLCEPLKRLGATVTGIDASKKNIEVAKFHA--KEMNLNINYIKCSPENL- 118

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + KF+ ++  EV+EHV++   F ++ S L    G   ++TIN+++++Y  AI+ AE++
Sbjct: 119 KFKNKFNVILNMEVVEHVSNVDLFIQNCSMLIEKNGIMFVATINKNLKSYLYAILGAEYV 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FLTP+EL +I  R +  + EM G  +N  + +W  S D SVN+I+  
Sbjct: 179 LRWLPIGTHDWEKFLTPQELEIIAIRNNFTMDEMVGMKFNLFSKKWLKSADASVNYISTF 238

Query: 343 TKN 345
           +KN
Sbjct: 239 SKN 241


>gi|316932072|ref|YP_004107054.1| ubiquinone biosynthesis O-methyltransferase [Rhodopseudomonas
           palustris DX-1]
 gi|315599786|gb|ADU42321.1| ubiquinone biosynthesis O-methyltransferase [Rhodopseudomonas
           palustris DX-1]
          Length = 253

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 106/237 (44%), Positives = 147/237 (62%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP R++FIR   CR F ++  S    EGL
Sbjct: 13  STVDPAEIAKFSKLSAEWWDPTGRMAPLHRINPLRISFIRDAACRKFERNAKSLSCLEGL 72

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V GID    NI  ARLHAD       I+Y     E  +
Sbjct: 73  RMLDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAARLHAD--KSHLAIDYRNVMVED-I 129

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE++
Sbjct: 130 DPRERFDIVLAMEVIEHVTDVGAFLSRCAALVKPTGIMVVATLNRNWKSFALAIVGAEYV 189

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           + WLP+GTHQW  F+TP EL   L R  + V E +G V+NPL  RW LS D+ VN++
Sbjct: 190 MRWLPRGTHQWDKFVTPAELEQHLNRLKLTVTEQSGLVFNPLADRWKLSPDMDVNYM 246


>gi|418403501|ref|ZP_12976989.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sinorhizobium
           meliloti CCNWSX0020]
 gi|359502561|gb|EHK75135.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sinorhizobium
           meliloti CCNWSX0020]
          Length = 248

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 157/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RL +IR  +  HF +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLTYIRDKVSEHFGRDPKSRQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G DA EKNI IA+ HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPMARMGADVVGADASEKNIGIAKTHA--AGSGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDVVLNMEVVEHVADVEFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + P+EL   L+ + +++ +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYDKLVRPDELERPLEASGMEIADRTGVFFNPLANQWNLSRDMDVNYM 241


>gi|190893594|ref|YP_001980136.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli CIAT
           652]
 gi|226725556|sp|B3PP83.1|UBIG_RHIE6 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|190698873|gb|ACE92958.1| 3-demethylubiquinone-9 3-methyltransferase protein [Rhizobium etli
           CIAT 652]
          Length = 248

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 110/246 (44%), Positives = 155/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +D  S RP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACANFGRDQKSPRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  +KNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSDKNIGIASTHAKA--SGVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQWNLSRDMDVNY 240

Query: 339 IAFGTK 344
           +  G +
Sbjct: 241 MLLGKR 246


>gi|418055333|ref|ZP_12693388.1| 3-demethylubiquinone-9 3-methyltransferase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353210915|gb|EHB76316.1| 3-demethylubiquinone-9 3-methyltransferase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 259

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 102/237 (43%), Positives = 145/237 (61%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           ++L   E+ +FS +A  WWD  G ++PLH + P RL+FIR     HF +D  + +P  GL
Sbjct: 16  TTLDPKEVQRFSRLASEWWDPNGKFRPLHQIGPPRLSFIRDQAVAHFGRDTKTLKPLSGL 75

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
             +D+GCGGG++SEPL RMGATVT ID  E+NI IA+ HA+   +  +++Y     E L 
Sbjct: 76  TALDIGCGGGLVSEPLTRMGATVTAIDPSERNIAIAKSHAEA--QGLSVDYRSVRVEDLA 133

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E R FD V   EV+EHV DP +F    ++L    G  V ST+NR+ +A+A AI+ AE++
Sbjct: 134 AEGRTFDIVACLEVVEHVPDPKKFIAECASLVRPGGLAVFSTLNRTFKAWALAIVGAEYV 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQW  F+TPEEL    + A +      G  Y P+   W+ + D  VN++
Sbjct: 194 LGWLPRGTHQWDRFVTPEELARYAEAAGLAAPHFEGITYAPMRDVWTRNPDTDVNYL 250


>gi|118588517|ref|ZP_01545926.1| 3-demethylubiquinone-9 3-methyltransferase [Stappia aggregata IAM
           12614]
 gi|118439223|gb|EAV45855.1| 3-demethylubiquinone-9 3-methyltransferase [Stappia aggregata IAM
           12614]
          Length = 253

 Score =  224 bits (570), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 108/250 (43%), Positives = 154/250 (61%), Gaps = 2/250 (0%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
             +     S++   E+A+FSA+A+ WWD  G +KPLH  +P RL +I+  + RHF +DP 
Sbjct: 2   TGRAQETKSTIDSEEVARFSAMAEEWWDPTGKFKPLHKFSPVRLEYIKDHVSRHFGRDPK 61

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
           ++  F+GL  VD+GCGGG+LSEP+AR+GA V G D  E NIKIARLH  +      I+Y 
Sbjct: 62  ASDAFKGLRFVDIGCGGGLLSEPMARLGADVVGADPSETNIKIARLH--MKTSGLEIDYR 119

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             TAE L      FD V + EVIEHVAD   F ++ + +    G   ++TINR+++AYA 
Sbjct: 120 AETAEALAAAGETFDVVFSMEVIEHVADVPLFLEATAQMVRPGGLMFVATINRTLKAYAL 179

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE++L WLPKGTH +   + P E+   LQ A + + +  G  YNPLT  W+ S D+
Sbjct: 180 AIVGAEYVLRWLPKGTHSYEKLVRPSEIEGPLQSAGLTMIDRCGVTYNPLTDTWARSRDM 239

Query: 335 SVNFIAFGTK 344
            VN++    +
Sbjct: 240 DVNYMMLAER 249


>gi|328542094|ref|YP_004302203.1| 3-demethylubiquinone-9 3-methyltransferase [Polymorphum gilvum
           SL003B-26A1]
 gi|326411844|gb|ADZ68907.1| Putative 3-demethylubiquinone-9 3-methyltransferase protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 252

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 2/242 (0%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +H    ++   E+A+FSA+A  WWD  G +KPLH  +P RL +I+  +C  F +DP +  
Sbjct: 4   QHQTGGTVDEQEVARFSAMAAEWWDPTGKFKPLHKFSPVRLGYIKEQVCARFGRDPKAPD 63

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
            F+GL  +D+GCGGG+L EP+AR+GA V G D    NI++ARLHA        I+Y   T
Sbjct: 64  AFKGLRFLDIGCGGGLLCEPMARLGAEVVGADPSTVNIEVARLHA--AQSGLAIDYRAET 121

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE+L      FD V+  EV+EHVAD   F   ++ +    G  V++TINR+++AYA AI+
Sbjct: 122 AERLAAAGETFDVVLNMEVVEHVADVPLFLSEVARMVRPGGLMVVATINRTLKAYALAIV 181

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L WLPKGTH +   + PEE+   L  A + V +  G  YNPL   WS S D+ VN
Sbjct: 182 GAEYVLRWLPKGTHSYDRLVRPEEIEGPLAAAGLTVVDRTGVTYNPLLDSWSRSRDMDVN 241

Query: 338 FI 339
           ++
Sbjct: 242 YM 243


>gi|398354843|ref|YP_006400307.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
           USDA 257]
 gi|390130169|gb|AFL53550.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Sinorhizobium
           fredii USDA 257]
          Length = 248

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 155/240 (64%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RLA++R  +C  F +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLAYVRDRVCEQFGRDPKSPQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            GL ++D+GCGGG+LSEP+ARMGA V G DA EKNI IA+ HA        ++Y   TAE
Sbjct: 64  NGLRLLDIGCGGGLLSEPMARMGADVLGADASEKNIGIAKTHA--AGSGVKVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDIVLNMEVVEHVADVDFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L+ + + V +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELEKPLEASGMQVTDRTGVFFNPLANQWNLSKDMDVNYM 241


>gi|381166799|ref|ZP_09876013.1| 3-demethylubiquinone-9 3-O-methyltransferase [Phaeospirillum
           molischianum DSM 120]
 gi|380684372|emb|CCG40825.1| 3-demethylubiquinone-9 3-O-methyltransferase [Phaeospirillum
           molischianum DSM 120]
          Length = 245

 Score =  223 bits (569), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 150/245 (61%), Gaps = 3/245 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           + P +    E+A+F+A+AD WWD  G +KPLH  NP R+ F+R      F +DP   RPF
Sbjct: 2   TQPGTASPEEIARFTAMADAWWDPTGKFKPLHKFNPVRIDFMRRQFAELFGRDPSLERPF 61

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++DVG GGG+LSEPLA +G TVTGIDA EKN+K+A LHA  +   + + Y   + E
Sbjct: 62  EGLTLLDVGSGGGLLSEPLAALGFTVTGIDAGEKNVKVASLHA--EKTGANVTYRVASPE 119

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           +L +    +D V+  EV+EHV D   F +S  A     G  V +T+NR+ +++  A++ A
Sbjct: 120 QL-DPAEMYDVVLCMEVVEHVTDIDLFLRSAGAHLKPGGVFVGATLNRTPKSWLLAVVGA 178

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL WLP+GTH W  F+ P E   +L+ A I+     G  YNP++  W  +D + VN++
Sbjct: 179 EYILRWLPRGTHDWHKFVRPSEFSRMLRNAGIETHRFVGVSYNPISDEWRETDSLDVNYL 238

Query: 340 AFGTK 344
             G K
Sbjct: 239 VLGGK 243


>gi|86747206|ref|YP_483702.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris HaA2]
 gi|109895913|sp|Q2J419.1|UBIG_RHOP2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|86570234|gb|ABD04791.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris HaA2]
          Length = 253

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 148/236 (62%), Gaps = 3/236 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  AE+AKFS ++  WWD  G   PLH +NP R++FIR   CR F ++  S     GL 
Sbjct: 14  SVDPAEIAKFSKLSAQWWDPTGKMAPLHRINPLRISFIRDAACRKFERNAKSLSCLSGLR 73

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCG G+L EP  R+GA V GID    NI  A++HAD       I+Y CTT E+ ++
Sbjct: 74  MLDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAAKIHAD--KSHLPIDYRCTTVEE-ID 130

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
            + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE+++
Sbjct: 131 PRERFDIVLAMEVIEHVTDVGAFLGRCAALMKPNGIMVVATLNRNWKSFALAIVGAEYVM 190

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            WLP+GTHQW  F+TP EL   L    + V E +G V+NPL  RW LS D+ VN++
Sbjct: 191 RWLPRGTHQWDKFVTPAELEQHLHGFGMIVTEQSGLVFNPLADRWKLSADMDVNYM 246


>gi|378827175|ref|YP_005189907.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
           HH103]
 gi|365180227|emb|CCE97082.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium fredii
           HH103]
          Length = 248

 Score =  223 bits (568), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 155/240 (64%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RLA+IR  +C    +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLAYIRDKVCEQLGRDPKSPQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +GL ++D+GCGGG+LSEP+ARMGA V G DA E+NI IAR HA        ++Y   TAE
Sbjct: 64  KGLRLLDIGCGGGLLSEPMARMGADVLGADASERNIGIARTHA--AGSGVNVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALADAGESFDIVLNMEVVEHVADVDFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L+ + + V E  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEELEKPLEASGMQVTERTGVFFNPLANQWNLSKDMDVNYM 241


>gi|39933680|ref|NP_945956.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris CGA009]
 gi|39647526|emb|CAE26047.1| putative 3-demethylubiquinone-9 3-methyltransferase
           [Rhodopseudomonas palustris CGA009]
          Length = 260

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP R++FIR   CR F ++  S    EGL
Sbjct: 20  STVDPAEIAKFSKLSAEWWDPTGRMAPLHRINPLRISFIRDAACRKFERNAKSLSCLEGL 79

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V GID    NI  A+LHAD       I+Y     E+ +
Sbjct: 80  RMLDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAAKLHAD--KSHLAIDYRNVMVEE-I 136

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE++
Sbjct: 137 DPRERFDIVLAMEVIEHVTDVGAFLSRCAALMKPTGIMVVATLNRNWKSFALAIVGAEYV 196

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           + WLP+GTHQW  F+TP EL   L R  + V E +G V+NPL  RW LS D+ VN++
Sbjct: 197 MRWLPRGTHQWDKFVTPAELEQHLNRLKLIVTEQSGLVFNPLADRWKLSPDMDVNYM 253


>gi|344924610|ref|ZP_08778071.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Candidatus
           Odyssella thessalonicensis L13]
          Length = 248

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 158/237 (66%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           ++L   E+A+FS I+  WWD  G +KPLH LNPTRL +I   +  H+ K+   +  F+GL
Sbjct: 7   NTLDPEEIARFSKISSQWWDENGAFKPLHHLNPTRLDYITRQISYHYFKNTDKSPNFQGL 66

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+++EPL R+GA VTGIDA EK I++A+ HA L      I Y CTTAE L 
Sbjct: 67  SVLDIGCGGGLVAEPLTRLGAKVTGIDASEKTIEVAQAHARL--MGLDINYACTTAEALA 124

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + FD V+A E++EHVAD A F  + S L    G  + STINR++++YA AI+ AE+I
Sbjct: 125 DCGQLFDIVLALEIVEHVADVAAFVATCSHLVKPGGLVIFSTINRTLKSYAIAILGAEYI 184

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           + WLP GTH+W  FLTP EL   ++ A + + ++ G  +NP +  WSLS D+ VN+ 
Sbjct: 185 MRWLPVGTHEWQKFLTPGELGSTIREAKLMINDIRGMTFNPFSWSWSLSSDLDVNYF 241


>gi|296090481|emb|CBI40812.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/128 (83%), Positives = 119/128 (92%), Gaps = 2/128 (1%)

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           EKLVEEQR+FDAVI+ EVIEHVADPAEFCKSL+ALTVS GATV+STINRSMR+YATAI+ 
Sbjct: 42  EKLVEEQREFDAVISLEVIEHVADPAEFCKSLAALTVSNGATVVSTINRSMRSYATAILI 101

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
             + +  LPKGTHQWS+FLTPEELVLILQRASI V+EMAGFVYNPLTG+W+LSDDISVNF
Sbjct: 102 --YAIMQLPKGTHQWSNFLTPEELVLILQRASITVQEMAGFVYNPLTGQWTLSDDISVNF 159

Query: 339 IAFGTKNS 346
           IAFGTKNS
Sbjct: 160 IAFGTKNS 167


>gi|85713808|ref|ZP_01044798.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter sp.
           Nb-311A]
 gi|85699712|gb|EAQ37579.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter sp.
           Nb-311A]
          Length = 261

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 148/237 (62%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+ KFS ++  WWD  G   PLH +NP RL FIR   CR F +   S      L
Sbjct: 21  TTVDRAEIEKFSKLSQEWWDPNGKMAPLHRINPLRLQFIRDAACRKFERSARSLNCLADL 80

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+Y CTT E + 
Sbjct: 81  RLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHAE--KAHLSIDYRCTTVEDM- 137

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD ++A EV+EHVA+   F    +A+    G  V ST+NR+ +++A  I+AAE++
Sbjct: 138 DVRERFDIILAMEVVEHVANVGLFLDRCAAMLKPGGMVVASTLNRNWKSFALGIVAAEYV 197

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQW  F+TP+EL    +R  + + E +G VYNPL  +WSLS D+ VN++
Sbjct: 198 LRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYNPLADKWSLSSDMDVNYM 254


>gi|163745076|ref|ZP_02152436.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanibulbus indolifex
           HEL-45]
 gi|161381894|gb|EDQ06303.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanibulbus indolifex
           HEL-45]
          Length = 256

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 157/238 (65%), Gaps = 3/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD  G +KPLH LNP RL +I S +   F +D   + PFEGL
Sbjct: 6   STIDPAEIAKFEAMAAEWWDLNGKFKPLHMLNPCRLDYITSQIAGEFDRDLTVSAPFEGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+LSEP+AR+GA V G DA   NI +A++HA        I+Y  TTAE + 
Sbjct: 66  RILDIGCGGGLLSEPMARLGADVVGADAAAGNIPVAQVHAQ--QSGLEIDYRHTTAEAMA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   KFD V+  EV+EHVA P ++  +   L    G  + ST+NR+ +++  AI+ AEH+
Sbjct: 124 EAGEKFDIVLNMEVVEHVASPIDYLIACRRLLKPGGLHICSTLNRNPKSFMMAIVGAEHV 183

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           + WLPKGTH W+ F+TP+EL  +L RA ++  +  GFV+NP+   W LSD D+SVN++
Sbjct: 184 MRWLPKGTHDWNKFITPDELYDLLNRAGLEPVDRKGFVFNPVAWSWRLSDRDLSVNYV 241


>gi|150397704|ref|YP_001328171.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium medicae
           WSM419]
 gi|166201224|sp|A6UCF6.1|UBIG_SINMW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|150029219|gb|ABR61336.1| ubiquinone biosynthesis O-methyltransferase [Sinorhizobium medicae
           WSM419]
          Length = 248

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/240 (44%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RLA+IR  +  HF +DP S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLAYIRDRVAEHFGRDPKSRQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+L EP+ARMGA V G DA EKNI IAR HA        ++Y   TAE
Sbjct: 64  EGLRLLDIGCGGGLLCEPMARMGADVLGADASEKNIGIARTHA--AGSGVRVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDVVLNMEVVEHVADVDFFMTTCAHMVRPGGMMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEE+   L  + +++ +  G  +NPL+ +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYEKLVRPEEIENPLVASGLEIADRTGVFFNPLSNQWNLSKDMDVNYM 241


>gi|75674579|ref|YP_317000.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter
           winogradskyi Nb-255]
 gi|109895676|sp|Q3SVP3.1|UBIG_NITWN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|74419449|gb|ABA03648.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrobacter
           winogradskyi Nb-255]
          Length = 261

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 148/237 (62%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+ KFS ++  WWD  G   PLH +NP RL FIR   CR F ++  S     GL
Sbjct: 21  TTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIRDAACRKFDRNARSLNCLAGL 80

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V G+D    NI  A+LHA+      +I+Y CTT E + 
Sbjct: 81  RLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHAE--KAHLSIDYRCTTVEDM- 137

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD ++A EV+EHVAD   F    +A+    G    ST+NR+ +++A  I+AAE++
Sbjct: 138 DVRERFDIILAMEVVEHVADVGLFLDRCAAMLKPGGMMAASTLNRNWKSFALGIVAAEYV 197

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQW  F+TP+EL    +R  + + E +G VY+P   RWSLS D+ VN++
Sbjct: 198 LRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFGDRWSLSSDMDVNYM 254


>gi|192289037|ref|YP_001989642.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodopseudomonas
           palustris TIE-1]
 gi|57013214|sp|Q6NC69.2|UBIG_RHOPA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725558|sp|B3QCF3.1|UBIG_RHOPT RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|192282786|gb|ACE99166.1| ubiquinone biosynthesis O-methyltransferase [Rhodopseudomonas
           palustris TIE-1]
          Length = 253

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 148/237 (62%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP R++FIR   CR F ++  S    EGL
Sbjct: 13  STVDPAEIAKFSKLSAEWWDPTGRMAPLHRINPLRISFIRDAACRKFERNAKSLSCLEGL 72

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EP  R+GA V GID    NI  A+LHAD       I+Y     E+ +
Sbjct: 73  RMLDIGCGAGLLCEPFTRLGAQVIGIDPSATNIAAAKLHAD--KSHLAIDYRNVMVEE-I 129

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EVIEHV D   F    +AL    G  V++T+NR+ +++A AI+ AE++
Sbjct: 130 DPRERFDIVLAMEVIEHVTDVGAFLSRCAALMKPTGIMVVATLNRNWKSFALAIVGAEYV 189

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           + WLP+GTHQW  F+TP EL   L R  + V E +G V+NPL  RW LS D+ VN++
Sbjct: 190 MRWLPRGTHQWDKFVTPAELEQHLNRLKLIVTEQSGLVFNPLADRWKLSPDMDVNYM 246


>gi|15966368|ref|NP_386721.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           1021]
 gi|334317372|ref|YP_004549991.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           AK83]
 gi|384530498|ref|YP_005714586.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           BL225C]
 gi|433614436|ref|YP_007191234.1| bifunctional ubiquinone biosynthesis O-methyltransferase
           [Sinorhizobium meliloti GR4]
 gi|21363063|sp|Q92MK1.1|UBIG_RHIME RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|15075639|emb|CAC47194.1| Putative 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium
           meliloti 1021]
 gi|333812674|gb|AEG05343.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           BL225C]
 gi|334096366|gb|AEG54377.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           AK83]
 gi|429552626|gb|AGA07635.1| bifunctional ubiquinone biosynthesis O-methyltransferase
           [Sinorhizobium meliloti GR4]
          Length = 248

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 156/240 (65%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RL +IR  +  HF +D  S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLTYIRDRVSEHFGRDAKSRQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA V G DA EKNI IAR HA       +++Y   TAE
Sbjct: 64  EGLRVLDIGCGGGLLSEPMARMGADVVGADASEKNIGIARTHA--AGSGVSVDYRAVTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDVVLNMEVVEHVADVEFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + P+EL   L+ + +++ +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYDKLVRPDELERPLEASGMEIADRTGVFFNPLANQWNLSRDMDVNYM 241


>gi|296775800|gb|ADH43055.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured SAR11 cluster alpha proteobacterium
           H17925_48B19]
          Length = 242

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 153/238 (64%), Gaps = 4/238 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS IA+ WWD  G +KPLH  NP R+ +IR T+   F K     +P +GL
Sbjct: 4   NTINKKEIEKFSKIAEEWWDPNGKFKPLHKFNPIRIKYIRDTILSEF-KIKKEHQPLKGL 62

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+LSEP+AR+GA V GIDA  KNI++A+ H  L      I+Y  ++ E L 
Sbjct: 63  NILDIGCGGGLLSEPMARLGADVVGIDASFKNIQVAKYH--LKKSKLKIKYYNSSPENL- 119

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + +++FD ++  E++EHV D   F K  S      G   I+T+N+++++Y  AI+ AE++
Sbjct: 120 KIKKRFDIILNMEIVEHVEDVDFFIKESSKFLKKSGVMFIATLNKTLKSYLFAIVGAEYV 179

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           L WLP GTH W  F+ PE L  I ++ S+ +K++ G  +NP+   WS++ D SVN+I+
Sbjct: 180 LKWLPIGTHDWDKFVKPEYLTDICEKNSLKLKKIDGMTFNPILNEWSVTSDKSVNYIS 237


>gi|407770708|ref|ZP_11118075.1| 3-demethylubiquinone-9 3-methyltransferase [Thalassospira
           xiamenensis M-5 = DSM 17429]
 gi|407286282|gb|EKF11771.1| 3-demethylubiquinone-9 3-methyltransferase [Thalassospira
           xiamenensis M-5 = DSM 17429]
          Length = 254

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/256 (41%), Positives = 158/256 (61%), Gaps = 9/256 (3%)

Query: 90  HSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF 149
           H+  NN++  +A       E+A+FSA+A+ WWD  G  KPLH  NP RL  +R  +  H 
Sbjct: 3   HASANNSRTANA------EEIARFSAMAEKWWDPNGAMKPLHKFNPIRLQLLRDNIAAHL 56

Query: 150 RKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS 209
            +D       + + I+D+GCG G+LSEPLARMGA +T IDA E NI++A++HA       
Sbjct: 57  GRDANQLDVLKDVEIIDIGCGAGLLSEPLARMGAKMTSIDAAENNIEVAKVHAV--QSGL 114

Query: 210 TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
            I+Y   T E LV+E ++FD V+  EVIEHV DP  F ++ +AL    G   ++T+NR++
Sbjct: 115 AIDYRNCTPEMLVDEGKQFDIVLNMEVIEHVDDPQFFMQACAALLKPGGLMFVATLNRTI 174

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           ++ A A   AE+IL WLP GTH W  F+ P E+  +L+ A +D+ ++ G  YNP+T +WS
Sbjct: 175 KSLALAKFGAEYILRWLPAGTHDWRKFVKPSEMSGLLRGAGLDLVDITGVTYNPITDKWS 234

Query: 330 LSD-DISVNFIAFGTK 344
           ++  D+ +N++    K
Sbjct: 235 IAPRDLDINYMVIAQK 250


>gi|395784706|ref|ZP_10464528.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella melophagi
           K-2C]
 gi|395421966|gb|EJF88188.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella melophagi
           K-2C]
          Length = 248

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/249 (42%), Positives = 160/249 (64%), Gaps = 5/249 (2%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           NK H+   ++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP S
Sbjct: 3   NKAHT---TIDQSEIDHFSQIASEWWNPQGKFRPLHQFNPTRLAYIKEKICLEFDRDPMS 59

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
             PFEGL I+D+GCGGG+L EP+AR+G T+ G DA + NI++A+ HA       +I+Y  
Sbjct: 60  LTPFEGLRILDIGCGGGLLCEPMARLGTTIIGADASQTNIEVAKNHA--IQSGLSIDYRA 117

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           TTAE L +E+ +FD ++  E++EHVAD   F  + + +   +G   ++T+NR+ +A+  A
Sbjct: 118 TTAETLADEEEQFDVILNMEIVEHVADVNLFISATAKMLKPQGLMFVATLNRTWKAWGLA 177

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           I+ AE+IL WLPKGTH +  FL P EL  +L + ++ V +  G  YNPL   W+ S D+ 
Sbjct: 178 IVGAEYILRWLPKGTHDYKKFLKPLELKKLLSQNTLTVIDEIGITYNPLNDSWNRSKDMD 237

Query: 336 VNFIAFGTK 344
           VN++    K
Sbjct: 238 VNYMLLAKK 246


>gi|224048391|ref|XP_002194375.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Taeniopygia guttata]
          Length = 311

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 108/245 (44%), Positives = 152/245 (62%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  +A  WWD EG Y  LH++N  R+ FIR TL      + +   P  G+
Sbjct: 30  SSVDSKELKKFQLLAHKWWDEEGEYAALHSMNDIRVPFIRDTLLS-MSSNYHLGNPLSGI 88

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+LSEPL R+GA+VTGID VE NI+ A  H   DP  +  I+Y  ++ E++
Sbjct: 89  KILDVGCGGGLLSEPLGRLGASVTGIDPVEDNIRTADQHKSFDPVLAKRIQYKSSSLEEI 148

Query: 222 VEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE  + FD ++ASEV+EHVAD   F K  S +   EG+  I+TIN++  +Y   I+ AE
Sbjct: 149 VEESMETFDVIVASEVVEHVADLETFIKCCSQVLKPEGSLFITTINKTQLSYVLGIVVAE 208

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I+  +P+GTH+W  F+ PEEL  +L+     VK + G +YNPL+G WS  +  S+N+  
Sbjct: 209 KIMGIVPEGTHEWEKFVPPEELERLLESNGFSVKSVNGMLYNPLSGSWSWMESTSLNYAV 268

Query: 341 FGTKN 345
              K+
Sbjct: 269 HAVKS 273


>gi|218661433|ref|ZP_03517363.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli IE4771]
          Length = 248

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/241 (45%), Positives = 153/241 (63%), Gaps = 2/241 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP S  P
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACENFGRDPKSPGP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             GL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LGGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHAKA--SGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L      FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELAGAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ + AG  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELERPLAASGLEITDRAGVFFNPLSNQWNLSRDMDVNY 240

Query: 339 I 339
           +
Sbjct: 241 M 241


>gi|297182632|gb|ADI18790.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured SAR11 cluster bacterium HF4000_37C10]
          Length = 241

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 153/243 (62%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KFS +A  WW+  G +KPLH  NPTR+ FI+  L  +F  +P +  P + +
Sbjct: 2   STVDKIEVEKFSKLASDWWNPNGKFKPLHLFNPTRIKFIKEKLVDYFGLNPKAQEPLKKI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           NI+D+GCGGG+L EPL R+GATVTGIDA + NIK+A+ HA        I Y   + E L 
Sbjct: 62  NILDIGCGGGLLCEPLKRLGATVTGIDASKNNIKVAKFHA--KEMNLNINYIKCSPENL- 118

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + KF+ ++  EV+EHV++   F ++ S L    G   ++TIN+++++Y  AI+ AE+I
Sbjct: 119 KFKNKFNVILNMEVVEHVSNVNFFIQNCSTLIEKNGIMFVATINKNLKSYLYAILGAEYI 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FLTP EL +I  R +  + E+ G  +N  + +W  S D SVN+I+  
Sbjct: 179 LRWLPIGTHDWEKFLTPLELEIIAIRNNFTMDEIVGMKFNLFSKKWLKSTDASVNYISTF 238

Query: 343 TKN 345
           +KN
Sbjct: 239 SKN 241


>gi|188580165|ref|YP_001923610.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           populi BJ001]
 gi|179343663|gb|ACB79075.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           populi BJ001]
          Length = 245

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 148/237 (62%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A+F A+A  WWD  GP   LH  NP R+ +IR  +CR F +DP +  P EGL
Sbjct: 4   ASIDRDEVARFDALAARWWDERGPMAVLHKFNPVRVGYIRDEVCRIFDRDPAAPFPLEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+LSEPLAR+GATVTG+D    NI  AR HA+   E  +I+Y   T E + 
Sbjct: 64  SVIDIGCGGGVLSEPLARLGATVTGLDPATGNIAAARAHAEA--EGLSIDYRDETIEAVA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHV+D A F ++        G    +TINR+MR++A AI+ AE++
Sbjct: 122 ARGERFDVVLAMEVVEHVSDRAGFLRACCTTVKPGGLLFAATINRTMRSFALAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH W  F+TP EL   +    + V +  G VYNPL   W  S D  VN++
Sbjct: 182 LRWLPRGTHDWEKFVTPRELTADIAAGGLTVTDTTGVVYNPLNDSWRASRDTGVNYM 238


>gi|182678976|ref|YP_001833122.1| ubiquinone biosynthesis O-methyltransferase [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182634859|gb|ACB95633.1| ubiquinone biosynthesis O-methyltransferase [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 253

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 151/238 (63%), Gaps = 11/238 (4%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR-----KDPYSARPFEGLN 163
           ++A+F  +   WWD +GP   LHA NP R+A++R  LCRHF      +D ++A P +GL 
Sbjct: 15  DVARFDRVGGAWWDPQGPMAALHAFNPVRIAYLRDLLCRHFPQDGQFRDRHAAHPLQGLR 74

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS--TIEYCCTTAEKL 221
           ++D+GCG G+LSEPLAR+GA++T ID    NI++AR HA    ETS   I+Y C   E L
Sbjct: 75  LLDIGCGAGLLSEPLARLGASMTAIDPAPHNIEVARAHA----ETSGLAIDYRCMRVEDL 130

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
                 FDAV+  EV+EHVAD   F K  + L    G  + +T+NR+++++A AI+ AE+
Sbjct: 131 DPAAECFDAVLTMEVLEHVADVPAFLKYAADLVRPGGLLIAATLNRTLKSFALAIVGAEY 190

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL W+  GTHQW  F+TPEEL  +L+   + + +  G  Y+PL  +W LS D+ +N++
Sbjct: 191 ILRWVEPGTHQWRQFITPEELTRMLRANGLTLIDRTGASYDPLRRQWRLSHDLDINYM 248


>gi|405382559|ref|ZP_11036340.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. CF142]
 gi|397320965|gb|EJJ25392.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. CF142]
          Length = 248

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 106/246 (43%), Positives = 155/246 (63%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A +++  +E+ +FSA+A  WW   G +KPLH  NP RLA+IR     +F + P +A+P
Sbjct: 3   EAAKTTIDQSEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKAAENFSRSPKTAKP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA V G D  EKNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGAEVVGADPSEKNIGIASTHAKAS--GVAVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + +++    G   ++TINR+M+A A AI A
Sbjct: 121 EQLAEAGETFDIVLNMEVVEHVADVELFMNTCASMVRPGGLMFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL  +W+LS D+ VN+
Sbjct: 181 AENVLRWLPRGTHQYEKLVRPEELEKPLAASGLEIVDRTGVFFNPLANQWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MLLAKR 246


>gi|163850392|ref|YP_001638435.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens PA1]
 gi|163661997|gb|ABY29364.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens PA1]
          Length = 245

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 147/237 (62%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A+F A+A  WWD  GP   LH  NP R+ +IR   CR F +DP +  P EGL
Sbjct: 4   TSIDRDEVARFDALAARWWDERGPMAVLHKFNPVRVGYIRDEACRIFERDPAAPFPLEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+LSEPLAR+GATVTG+D    NI  AR HA+   E  TI+Y   T E + 
Sbjct: 64  SVIDIGCGGGVLSEPLARLGATVTGLDPATGNIAAARAHAEA--EGLTIDYRDETIEAVA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHV+D A F ++        G    +TINR+MR++A AI+ AE++
Sbjct: 122 ARGERFDIVLAMEVVEHVSDRAGFLRACCTTVKPGGLLFAATINRTMRSFALAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH W  F+TP EL   +    + V +  G VYNPL   W  S D  VN++
Sbjct: 182 LRWLPRGTHDWEKFVTPRELSADITAGGLTVTDTTGVVYNPLNDSWRASRDTGVNYM 238


>gi|40062802|gb|AAR37686.1| 3-demethylubiquinone-9 3-methyltransferase [uncultured marine
           bacterium 440]
          Length = 241

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 152/243 (62%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WW+  G +KPLH  NPTR+ FI+  L  HF+ DP + +P E L
Sbjct: 2   TTVDKIEIEKFSKLAKDWWNPSGKFKPLHLFNPTRIRFIKEKLVSHFKLDPNNEKPLEKL 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EPL R+GA +TGIDA   NI++A++H+        I+Y   + E L 
Sbjct: 62  KILDIGCGGGLLCEPLNRLGAKITGIDASNDNIEVAKIHS--REMNLNIKYIRCSPENL- 118

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
             + +FD ++  EV+EHV++ + F ++ S L    G   ++TIN+++++Y  AI  AE+I
Sbjct: 119 NFKNEFDVILNMEVVEHVSNVSLFIQNCSKLIRKNGIMFVATINKNLKSYIFAIFGAEYI 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FLTP+ L +I  + +    E+ G  +N    +WS S+D SVN+I+  
Sbjct: 179 LRWLPIGTHDWDKFLTPQNLKIIAIKNNFRFDEIVGMKFNLFFQKWSKSNDTSVNYISTF 238

Query: 343 TKN 345
            KN
Sbjct: 239 LKN 241


>gi|327261488|ref|XP_003215562.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Anolis carolinensis]
          Length = 314

 Score =  220 bits (561), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 153/246 (62%), Gaps = 3/246 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF  +A  WWD +G Y  LH++N  R+ FIR +   + R DP+   P  G+
Sbjct: 41  STVDPKEMKKFQLLAHKWWDEQGQYAALHSMNDIRVPFIRDS-ALNLRNDPHLGSPLSGM 99

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+VTGID +E NI+ A +HA  DP+ +  I+Y     E +
Sbjct: 100 KILDVGCGGGLLTEPLGRLGASVTGIDPLEDNIRTAEVHAAFDPDLAKRIQYKSCALEDI 159

Query: 222 VEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE   +FD V+ASEV+EHVAD   F K    +   EG+  I+TIN++  +Y   I+ AE
Sbjct: 160 VEEASEQFDIVVASEVVEHVADVETFLKCCGDVLKPEGSLFITTINKTQLSYIFGILVAE 219

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P GTH+W  F+ PEE+  +L+     VK + G +YNPL G WS  ++ S+N+  
Sbjct: 220 RVLGIVPAGTHEWEKFIAPEEVERLLESNGFSVKTVRGMLYNPLFGSWSWIENTSINYAL 279

Query: 341 FGTKNS 346
              K+S
Sbjct: 280 HAVKSS 285


>gi|384537198|ref|YP_005721283.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           SM11]
 gi|336034090|gb|AEH80022.1| 3-demethylubiquinone-9 3-methyltransferase [Sinorhizobium meliloti
           SM11]
          Length = 248

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 155/240 (64%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+ +FSA+A  WWD  G ++PLH  NP RL +IR  +  HF +D  S +P 
Sbjct: 4   TARTTIDQSEVDRFSAMAAEWWDPTGKFRPLHKFNPVRLTYIRDRVSEHFGRDAKSRQPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+LSEP+ARMGA + G DA EKNI IAR HA       +++Y   T E
Sbjct: 64  EGLRVLDIGCGGGLLSEPMARMGADIVGADASEKNIGIARTHA--AGSGVSVDYRAVTGE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+++A A AI AA
Sbjct: 122 ALAEAGESFDVVLNMEVVEHVADVEFFMTTCAHMVRPGGLMFVATINRTLKAAALAIFAA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + P+EL   L+ + +++ +  G  +NPL  +W+LS D+ VN++
Sbjct: 182 ENVLRWLPRGTHQYDKLVRPDELERPLEASGMEIADRTGVFFNPLANQWNLSRDMDVNYM 241


>gi|239832950|ref|ZP_04681279.1| ubiquinone biosynthesis O-methyltransferase [Ochrobactrum
           intermedium LMG 3301]
 gi|444311551|ref|ZP_21147158.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Ochrobactrum
           intermedium M86]
 gi|239825217|gb|EEQ96785.1| ubiquinone biosynthesis O-methyltransferase [Ochrobactrum
           intermedium LMG 3301]
 gi|443485110|gb|ELT47905.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Ochrobactrum
           intermedium M86]
          Length = 248

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 155/245 (63%), Gaps = 2/245 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  FS IA  WW+ +G ++PLH  NPTRLA+I+  +C  F +DP + RP 
Sbjct: 4   TARTTIDASEIEHFSRIAAEWWNPQGKFRPLHKFNPTRLAYIKEKICARFNRDPNAPRPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL ++D+GCGGG+L EP+AR+GATV G DA   NI++A++HA        ++Y  TTAE
Sbjct: 64  EGLRLLDIGCGGGLLCEPMARLGATVIGADASTTNIEVAKIHA--AQSGVEVDYRATTAE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   KFD V+  EV+EHV+D   F  + S +    G   ++TINR+++AY  AII A
Sbjct: 122 ALAEAGEKFDVVLNMEVVEHVSDVDLFMSATSEMVKPGGLMFVATINRTLKAYGLAIIGA 181

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L WLP+GTHQ+   + PEEL   L +  + + +  G  YNPL   W+ S D  VN++
Sbjct: 182 EYVLRWLPRGTHQYEKLVRPEELESALAKGGLRLIDKLGVTYNPLADSWNRSRDTDVNYM 241

Query: 340 AFGTK 344
               +
Sbjct: 242 VLAER 246


>gi|240137468|ref|YP_002961939.1| UbiG: ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens AM1]
 gi|418059793|ref|ZP_12697731.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens DSM 13060]
 gi|240007436|gb|ACS38662.1| putative UbiG: ubiquinone biosynthesis O-methyltransferase
           [Methylobacterium extorquens AM1]
 gi|373566677|gb|EHP92668.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens DSM 13060]
          Length = 245

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 108/237 (45%), Positives = 147/237 (62%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A+F A+A  WWD  GP   LH  NP R+ +IR   CR F +DP +  P EGL
Sbjct: 4   ASIDRDEVARFDALAARWWDERGPMAVLHKFNPVRVGYIRDEACRIFDRDPAAPFPLEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+LSEPLAR+GATVTG+D    NI  AR HA+   E  TI+Y   T E + 
Sbjct: 64  SVIDIGCGGGVLSEPLARLGATVTGLDPATGNIAAARAHAEA--EGLTIDYRDETIEAVA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHV+D A F ++        G    +TINR+MR++A AI+ AE++
Sbjct: 122 ARGERFDIVLAMEVVEHVSDRAGFLRACCTTVKPGGLLFAATINRTMRSFALAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH W  F+TP EL   +    + V +  G VYNPL   W  S D  VN++
Sbjct: 182 LRWLPRGTHDWEKFVTPRELSADITAGGLTVTDTTGVVYNPLNDSWRASRDTGVNYM 238


>gi|300025025|ref|YP_003757636.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526846|gb|ADJ25315.1| ubiquinone biosynthesis O-methyltransferase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 259

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 150/248 (60%), Gaps = 6/248 (2%)

Query: 96  NKKHSAPS----SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +++H  P+    +L   E+ +FS IA  WWD  G ++PLH + P RL+FIR     HF +
Sbjct: 5   SRQHDDPTPASANLDPEEVRRFSEIASEWWDPNGKFRPLHQIGPPRLSFIRDQAVAHFGR 64

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
           D    +P  GL  +D+GCGGG+++EPL RMGATVT ID  E+NI IA+ HA+   +   I
Sbjct: 65  DAKILKPLAGLTALDIGCGGGLVAEPLTRMGATVTAIDPSERNIAIAKSHAEA--QGLAI 122

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           +Y     E LV E R FD V   EV+EHV DP +F    ++L    G  V ST+NR+++A
Sbjct: 123 DYRPVRVEDLVAEGRTFDIVACLEVVEHVPDPQKFIAECASLVRPGGLAVFSTLNRTLKA 182

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +A AI+ AE++L WLP+GTHQW  F+T +EL    + A +   +  G  Y PL   W+ +
Sbjct: 183 WALAIVGAEYVLGWLPRGTHQWDRFVTTDELRRYAETAGLTDPQFEGITYTPLRDVWARN 242

Query: 332 DDISVNFI 339
            D  VN++
Sbjct: 243 PDTDVNYL 250


>gi|399994583|ref|YP_006574823.1| 3-demethylubiquinone-9 3-methyltransferase [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
 gi|398659138|gb|AFO93104.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 248

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 114/246 (46%), Positives = 159/246 (64%), Gaps = 9/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  S  PF GL
Sbjct: 6   STVDPSEIAKFEAMAAEWWDPTGKFKPLHMLNPCRLDYITQQIAAEFDRDLSSDAPFSGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
            ++D+GCGGG+LSEP+AR+GA V G DA   NI +A++HA    LD     I+Y  TTAE
Sbjct: 66  RLLDIGCGGGLLSEPMARLGADVVGADAAAGNIPVAQVHAQQSGLD-----IDYRHTTAE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AI  A
Sbjct: 121 ALAEAGEQFDVVLNMEVVEHVADPLSYLTATQQLLKPGGLQICSTINRNPKSYAMAIFGA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           E ++ WLP+GTH+WS F+TP+EL  +L ++ +   +  GFV+NP+   WSLS+ D+SVN+
Sbjct: 181 EVVMRWLPRGTHEWSKFITPDELFDLLTKSGLTPVDRKGFVFNPVFWSWSLSERDLSVNY 240

Query: 339 IAFGTK 344
           +   TK
Sbjct: 241 VTASTK 246


>gi|400756127|ref|YP_006564495.1| 3-demethylubiquinone-9 3-methyltransferase [Phaeobacter
           gallaeciensis 2.10]
 gi|398655280|gb|AFO89250.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Phaeobacter
           gallaeciensis 2.10]
          Length = 248

 Score =  220 bits (560), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/246 (46%), Positives = 159/246 (64%), Gaps = 9/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  S  PF GL
Sbjct: 6   STVDPSEIAKFEAMAAEWWDPTGKFKPLHMLNPCRLDYITQQIAAEFDRDLSSDAPFSGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
            ++DVGCGGG+LSEP+AR+GA V G DA   NI +A++HA    LD     I+Y  TTAE
Sbjct: 66  RLLDVGCGGGLLSEPMARLGADVVGADAAAGNIPVAQVHAQQSGLD-----IDYRHTTAE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AI  A
Sbjct: 121 ALAEAGEQFDVVLNMEVVEHVADPLSYLTATRQLLKPGGLQICSTINRNPKSYAMAIFGA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNF 338
           E ++ WLP+GTH+WS F+TP+EL  +L ++ +   +  GFV+NP+   WSLS+ D+SVN+
Sbjct: 181 EVVMRWLPRGTHEWSKFITPDELFDLLTKSGLTPVDRKGFVFNPVFWSWSLSERDLSVNY 240

Query: 339 IAFGTK 344
           +   TK
Sbjct: 241 VTASTK 246


>gi|218528952|ref|YP_002419768.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens CM4]
 gi|218521255|gb|ACK81840.1| ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens CM4]
          Length = 245

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 147/237 (62%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A+F A+A  WWD  GP   LH  NP R+ +IR   CR F +DP +  P EGL
Sbjct: 4   ASIDRDEVARFDALAARWWDERGPMAVLHKFNPVRVGYIRDEACRIFDRDPTAPFPLEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+LSEPLAR+GATVTG+D    N+  AR HA+   E  TI+Y   T E + 
Sbjct: 64  SVIDIGCGGGVLSEPLARLGATVTGLDPATGNVAAARAHAEA--EGLTIDYRDETIEAVA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHV+D A F ++        G    +TINR+MR++A AI+ AE++
Sbjct: 122 ARGERFDIVLAMEVVEHVSDRAGFLRACCTTVKPGGLLFAATINRTMRSFALAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH W  F+TP EL   +    + V +  G VYNPL   W  S D  VN++
Sbjct: 182 LRWLPRGTHDWEKFVTPRELSADITAGGLTVTDTTGVVYNPLNDSWRASRDTGVNYM 238


>gi|84514885|ref|ZP_01002248.1| 3-demethylubiquinone-9 3-methyltransferase [Loktanella
           vestfoldensis SKA53]
 gi|84511044|gb|EAQ07498.1| 3-demethylubiquinone-9 3-methyltransferase [Loktanella
           vestfoldensis SKA53]
          Length = 261

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/250 (44%), Positives = 161/250 (64%), Gaps = 3/250 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           KK S  +++  +E+AKF A+A  WWD  G +KPLH +NP RL +I   +   F +D    
Sbjct: 14  KKMSPTNTVDPSEIAKFEAMAAEWWDLNGKFKPLHMMNPVRLDYITRQIAAEFGRDLQGP 73

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
            PF GL ++D+GCGGG+L EP+AR+GA V G DA  +NI +A++HA        I+Y  +
Sbjct: 74  APFAGLRLLDIGCGGGLLCEPMARLGAVVVGADAAARNIPVAQVHAA--QSGLEIDYRHS 131

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           TAE L E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ +++A AI
Sbjct: 132 TAEALAEAGEQFDVVLNMEVVEHVADPLGYLTACQQLLKPGGLHICSTINRNPKSFAMAI 191

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DIS 335
           + AE ++ WLPKGTH+W+ F+TP+EL  +L++A +   +  GFV+NPL   W++SD D+S
Sbjct: 192 VGAEWVMRWLPKGTHEWAKFITPDELFALLEKAGLVPVDRKGFVFNPLRFSWAISDRDLS 251

Query: 336 VNFIAFGTKN 345
           VN++   TK 
Sbjct: 252 VNYVTAATKG 261


>gi|71083221|ref|YP_265940.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|109895677|sp|Q4FNA2.1|UBIG_PELUB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|71062334|gb|AAZ21337.1| probable 3-demethylubiquinone-9 3-O-methyltransferase RP622
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 240

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 156/243 (64%), Gaps = 4/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+ KFS IA+ WWD  G +KPLH  NP R+ +I+  + + F K   S +P + +
Sbjct: 2   NSINKKEIEKFSKIAEEWWDPNGKFKPLHNFNPIRIRYIKENIIKDF-KIRSSDKPLKNI 60

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+ R+GA+V GIDA +KNI++A+ HA        I+Y   + E ++
Sbjct: 61  KLLDIGCGGGLLSEPMCRLGASVVGIDASKKNIEVAKFHAK--KNKLKIDYKVASPE-ML 117

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++++KFD ++  E++EHV D   F K  S L    G   I+T+N+++++Y  AI+ AE+I
Sbjct: 118 KDKKKFDVILNMEIVEHVNDIDFFIKESSKLLKKNGIMFIATLNKTLKSYVFAIVGAEYI 177

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  F+ P EL+ I ++ ++ +K++ G  +N L   W +++D SVN+I   
Sbjct: 178 LKWLPIGTHDWEKFVKPSELIDISKKNNLSLKKLDGMNFNILDNSWKVTNDTSVNYITKF 237

Query: 343 TKN 345
            KN
Sbjct: 238 IKN 240


>gi|91762349|ref|ZP_01264314.1| probable 3-demethylubiquinone-9 3-O-methyltransferase [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91718151|gb|EAS84801.1| probable 3-demethylubiquinone-9 3-O-methyltransferase [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 240

 Score =  219 bits (558), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 156/243 (64%), Gaps = 4/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+ KFS IA+ WWD  G +KPLH  NP R+ +I+  + + F K   S +P + +
Sbjct: 2   NSINKKEIEKFSKIAEEWWDPNGKFKPLHNFNPIRIRYIKENIIKDF-KIRSSDKPLKNI 60

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+ R+GA+V GIDA +KNI++A+ HA        I+Y   + E ++
Sbjct: 61  KLLDIGCGGGLLSEPMCRLGASVVGIDASKKNIEVAKFHAK--KNKLKIDYKVASPE-ML 117

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           ++++KFD ++  E++EHV D   F K  S L    G   I+T+N+++++Y  AI+ AE+I
Sbjct: 118 KDKKKFDVILNMEIVEHVNDIDFFIKESSKLLKKNGIMFIATLNKTLKSYVFAIVGAEYI 177

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  F+ P EL+ I ++ ++ +K++ G  +N L   W +++D SVN+I   
Sbjct: 178 LKWLPIGTHDWEKFVKPSELIDICKKNNLSLKKLDGMNFNILDNSWKVTNDTSVNYITKF 237

Query: 343 TKN 345
            KN
Sbjct: 238 IKN 240


>gi|308153299|ref|NP_001184017.1| coenzyme Q3 homolog, methyltransferase precursor [Xenopus
           (Silurana) tropicalis]
          Length = 346

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/262 (44%), Positives = 159/262 (60%), Gaps = 6/262 (2%)

Query: 81  SPSINTAENHSQLNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           S S N  EN   + +N +  A S ++   E+ KF A    WWD EG +  LHA+N  R+ 
Sbjct: 55  SGSCNENENRGNICHNFRMYATSQTVDPLEMRKFQAWVQKWWDEEGMFSVLHAMNDIRVP 114

Query: 140 FIRSTLC-RHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIA 198
           FIR +L  R++  D     P  G+NI+DVGCGGG+LSEPL R+GA+VTGID +E NIKIA
Sbjct: 115 FIRDSLMSRNYEHD--VGCPLSGVNILDVGCGGGLLSEPLGRLGASVTGIDPLEDNIKIA 172

Query: 199 RLHADLDPETS-TIEYCCTTAEKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVS 256
             H   DP     ++Y   T E+LV+     FDA++ASEV+EHVAD   F +S   +   
Sbjct: 173 AQHKSFDPVLDKQVQYKSCTVEELVDGHLGYFDAIVASEVLEHVADVESFIQSCFQVLKP 232

Query: 257 EGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEM 316
            G+  ++TIN++  +YA AI+ AE IL   P+GTH W  F+ PEEL  +L+     V+ +
Sbjct: 233 GGSLFVTTINKTQLSYALAIVVAEKILGIAPEGTHDWEKFIHPEELERLLESNGFVVESL 292

Query: 317 AGFVYNPLTGRWSLSDDISVNF 338
            G +YNPL+G WS   D SVN+
Sbjct: 293 KGMLYNPLSGSWSWISDTSVNY 314


>gi|90420196|ref|ZP_01228104.1| ubiquinone biosynthesis O-methyltransferase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335530|gb|EAS49280.1| ubiquinone biosynthesis O-methyltransferase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 249

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/249 (42%), Positives = 156/249 (62%), Gaps = 4/249 (1%)

Query: 100 SAP--SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           SAP  +++  AE+ +FS +A  WW+  G +KPLH  NP RL +IR  L  +F  D ++ +
Sbjct: 2   SAPDGTTIDAAEVERFSRLAQEWWNPVGKFKPLHKFNPVRLEYIREQLAMNFDLDLFADK 61

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           PF+GL+++D+GCGGG++ EP+AR+GATV G DA E NI++ARLHA        I+Y  TT
Sbjct: 62  PFDGLSVLDIGCGGGLICEPMARLGATVVGADASETNIEVARLHA--AESGLAIDYRATT 119

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE +      FD V+A E++EHV+D   F  S +A+    G   ++TINR+ +A   AII
Sbjct: 120 AEAIAAGGETFDVVLALEIVEHVSDVDLFLTSCAAMVKPGGLLFVATINRTFKALTFAII 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L WLPKGTHQ+   + P+E+   ++ A + + +  G VY+PL   W  S D  VN
Sbjct: 180 GAEYVLGWLPKGTHQYERLVRPKEIGDPVEAAGLSMIDEVGVVYHPLADAWKRSRDTDVN 239

Query: 338 FIAFGTKNS 346
           ++    + S
Sbjct: 240 YMVLARRPS 248


>gi|114570810|ref|YP_757490.1| 3-demethylubiquinone-9 3-methyltransferase [Maricaulis maris MCS10]
 gi|122315458|sp|Q0AME1.1|UBIG_MARMM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|114341272|gb|ABI66552.1| 3-demethylubiquinone-9 3-methyltransferase [Maricaulis maris MCS10]
          Length = 254

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/242 (43%), Positives = 153/242 (63%), Gaps = 5/242 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+ KFS IA  WWD +  +KPLH  NP RL F+R T+C HF       RPFEGL 
Sbjct: 14  SIDPEEVEKFSRIAAEWWDPDSKFKPLHKFNPIRLGFMRDTICDHFGLS--GERPFEGLR 71

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           I+D+GCGGG++ EP+AR+GA VTG+DA E NIK A +HAD   +   I+Y    AE+L+E
Sbjct: 72  ILDIGCGGGLVCEPMARLGAHVTGVDAAEANIKTASVHAD--EQGLEIDYRHGVAEQLIE 129

Query: 224 E-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + +  FD V+  EV+EHVA+P  F    + L    G  + +TINR+ +A+A AI+ AE +
Sbjct: 130 QDEAPFDVVLNLEVMEHVANPHTFLVDCARLVKPGGLMICATINRTSKAFALAIVGAEWV 189

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           + WLP+GTH++   + P ++   L+   + ++   G  YNPLT ++SL +D +VN++   
Sbjct: 190 MGWLPRGTHRFHKLVKPSQIRTALREGGMSLRAPVGVSYNPLTDQFSLGEDTAVNYMMVA 249

Query: 343 TK 344
            K
Sbjct: 250 EK 251


>gi|304394132|ref|ZP_07376055.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130]
 gi|303293572|gb|EFL87949.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130]
          Length = 255

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/239 (43%), Positives = 144/239 (60%), Gaps = 2/239 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+  FS++A  WW+  G +KPLH  NP RL +IR TLC  F +DP +     GL
Sbjct: 14  STIDQAEIDHFSSLAKEWWNPTGKFKPLHKFNPVRLTYIRETLCEQFDRDPKAPDALAGL 73

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGG+L EPLARMGA V G DA E NI++A+LHA       +++Y  TTAE L 
Sbjct: 74  RILDIGCGGGLLCEPLARMGAEVVGADAGETNIEVAKLHA--AQSGVSVDYRATTAEALA 131

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
                FD V+  EV+EHVAD   F  + S +    G  +++TINR+ +A A AI  AE +
Sbjct: 132 ASGETFDVVLNMEVVEHVADVDLFLTACSNMVKPGGLMLVATINRTRKAQALAIFMAERV 191

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           L WLPKGTHQ+   + PEE+        ++  E +G  YN L+  W+ S D  VN++  
Sbjct: 192 LGWLPKGTHQYEKLVRPEEIEQPCAAVGLEKVETSGVFYNVLSDSWNRSSDTDVNYMML 250


>gi|254559646|ref|YP_003066741.1| UbiG: ubiquinone biosynthesis O-methyltransferase [Methylobacterium
           extorquens DM4]
 gi|254266924|emb|CAX22723.1| putative UbiG: ubiquinone biosynthesis O-methyltransferase
           [Methylobacterium extorquens DM4]
          Length = 245

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 106/237 (44%), Positives = 146/237 (61%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A+F A+A  WWD  GP   LH  NP R+ +IR   CR F +DP +  P EGL
Sbjct: 4   ASIDRDEVARFDALAARWWDERGPMAVLHKFNPVRVGYIRDEACRIFDRDPTAPFPLEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++D+GCGGG+LSEPLAR+GATVTG+D    N+  AR HA+   E  TI+Y   T E + 
Sbjct: 64  SVIDIGCGGGVLSEPLARLGATVTGLDPATGNVAAARAHAEA--EGLTIDYRDETIEAVA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FD V+A EV+EHV+D   F ++        G    +TINR+MR++A AI+ AE++
Sbjct: 122 ARGERFDIVLAMEVVEHVSDRTGFLRACCTTVKPGGLLFAATINRTMRSFALAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH W  F+TP EL   +    + V +  G VYNPL   W  S D  VN++
Sbjct: 182 LRWLPRGTHDWEKFVTPRELSADITAGGLTVTDTTGVVYNPLNDSWRASRDTGVNYM 238


>gi|409439223|ref|ZP_11266282.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium
           mesoamericanum STM3625]
 gi|408749128|emb|CCM77461.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium
           mesoamericanum STM3625]
          Length = 249

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 107/247 (43%), Positives = 154/247 (62%), Gaps = 2/247 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR     +F +D   ARP
Sbjct: 3   EAAKSTIDQQEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKAAENFGRDIRGARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +   +G   ++TINR+M+A A AI A
Sbjct: 121 EQLAEGGETFDIVLNMEVVEHVADVDFFLATCAKMVRPDGLMFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEE+   +    + + +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEEIEKPVTANGLSIIDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTKN 345
           +    ++
Sbjct: 241 MMLAKRS 247


>gi|83859688|ref|ZP_00953208.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicaulis sp.
           HTCC2633]
 gi|83852047|gb|EAP89901.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanicaulis sp.
           HTCC2633]
          Length = 256

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 156/238 (65%), Gaps = 6/238 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+ KFS IA  WWD +  + PLH  NP RL +IR  L RHF+ +   A P +GL 
Sbjct: 14  SIDPEEVEKFSRIAGEWWDPKSKFAPLHKFNPARLTYIRDILSRHFKTE--GAEPLKGLK 71

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGG++SEP+AR+GA+VTG+DA E NIK A +HA+ +    +I+Y   TAE+L+E
Sbjct: 72  VLDIGCGGGLVSEPIARLGASVTGVDAAEANIKTALVHAEEN--GLSIDYRHGTAEQLLE 129

Query: 224 E--QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           +    +FD V+  EV+EHVA+P +F ++ + +    G  ++ +INR+ RA+ATAI  AE+
Sbjct: 130 DGGPEQFDVVLNLEVVEHVANPDQFLRNCARMVKPGGMMIVGSINRTPRAFATAIFGAEY 189

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L WLP+GTH++S  + P E+   L+   + V E  G  YNPL   + ++ D  VN++
Sbjct: 190 VLGWLPRGTHRFSKLVKPMEVRAALKAEGLTVMEPVGVSYNPLKDVFFITSDSGVNYL 247


>gi|296775664|gb|ADH42941.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured SAR11 cluster alpha proteobacterium
           H17925_23J24]
          Length = 244

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 105/243 (43%), Positives = 148/243 (60%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +AD WWDA G +KPLHA NP R+ +I      HF       +    L
Sbjct: 5   TTINDKEIQKFSKLADEWWDAGGKFKPLHAFNPIRIKYIIDKCHSHFNLQNKDGKSLTHL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGG++ EPL+R+GA+VTGIDA  KNI++A++HA        I+Y  T+ EK  
Sbjct: 65  KVLDVGCGGGLVCEPLSRLGASVTGIDASFKNIEVAKIHA--KKSNLKIKYVNTSPEK-G 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   KFD ++  E++EHV +   F KS S L   +G   ++TINR+  +Y  AII AE++
Sbjct: 122 EINEKFDVILNLEIVEHVENLDLFLKSTSDLLKEDGIIFVATINRTFESYIKAIIGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FL P+E+   L++ + +   + G  YN L   WSLS + SVN+I  G
Sbjct: 182 LRWLPIGTHDWQKFLKPQEIEEKLKKLNFNKINVDGLKYNILFNEWSLSKNCSVNYILVG 241

Query: 343 TKN 345
            KN
Sbjct: 242 KKN 244


>gi|291001485|ref|XP_002683309.1| predicted protein [Naegleria gruberi]
 gi|284096938|gb|EFC50565.1| predicted protein [Naegleria gruberi]
          Length = 252

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 104/251 (41%), Positives = 160/251 (63%), Gaps = 9/251 (3%)

Query: 100 SAPSSLKHAELAKFSAIADT--WWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           S+PSS+   E+ KFS +A T  WW+  G  K LH +NPTR+ +IRS + +HF     +  
Sbjct: 3   SSPSSVDIHEVNKFSLLARTNEWWNPNGALKTLHHINPTRMEYIRSQIVKHFNISDNTHE 62

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
           P +GLNI+DVGCGGG++SE LAR+GA VTG+DA   NI IAR H   +   + + Y  +T
Sbjct: 63  PLKGLNILDVGCGGGLVSECLARLGANVTGLDASLDNINIARTH---NTSLNNLNYIHST 119

Query: 218 AEKLV--EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
            E L+   E  KFD +++ EVIEHVA    F  +LS L    G  ++ST+NR+ ++Y   
Sbjct: 120 VENLLYNNESTKFDCIVSVEVIEHVAHAQSFVHNLSKLLKPNGFLILSTMNRTPKSYLYT 179

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL--SDD 333
           I+ AE++L+ +P+GTH+W  ++TP+E+V+ + +A++ + ++ G  YNPL  +  +  + +
Sbjct: 180 IVMAEYVLNLVPRGTHEWRKYVTPQEMVIFMNQANVKLYDVQGMEYNPLLNKAFIEKNTE 239

Query: 334 ISVNFIAFGTK 344
           I VN+   G K
Sbjct: 240 IDVNYFITGVK 250


>gi|220934774|ref|YP_002513673.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
 gi|219996084|gb|ACL72686.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
          Length = 251

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + +++  + P S+   E+A+++A+A+ WWD  GP+ PLH LN  R+A+IR  LC    +D
Sbjct: 1   MASHQTQAQPGSVDPEEVARYTALAEKWWDTTGPFWPLHTLNRLRVAYIRDRLCERLDRD 60

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
           P SARP EGL ++D+GCGGGILSE +AR+GA V GID   +NI +A LHA    +   + 
Sbjct: 61  PASARPLEGLKVLDIGCGGGILSESMARLGADVHGIDVTPRNIAVASLHA--QGQDLPLR 118

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y   +AE+L E   ++D V+  EV+EHVAD   F  + + L    G   I+TINR+  ++
Sbjct: 119 YETVSAEELAERGEQYDLVLNMEVVEHVADLPGFMAACNRLVRPGGYGFIATINRNPVSF 178

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+ AE++L WLP+GTHQW  F  P EL  +L    ++V E  G    P T   SL+ 
Sbjct: 179 LVAILGAEYLLRWLPRGTHQWRRFPKPGELESLLAADGLEVIERIGVRVTPFTRGMSLTR 238

Query: 333 DISVNFI 339
            + VN++
Sbjct: 239 YLGVNYM 245


>gi|27375325|ref|NP_766854.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
           japonicum USDA 110]
 gi|39932527|sp|Q89XU2.1|UBIG_BRAJA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|27348461|dbj|BAC45479.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
           japonicum USDA 110]
          Length = 253

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 157/248 (63%), Gaps = 3/248 (1%)

Query: 92  QLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           Q N +      S++  AE+AKFS ++  WWD +G   PLH +NP RL +IR   CR F +
Sbjct: 2   QQNTSATAQPGSTVDAAEIAKFSKLSAEWWDPKGKMAPLHRINPLRLGYIRDAACRKFER 61

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
           +  S     GL ++D+GCG G+L EPL+R+GA V G+D  + NI  A+LHAD       I
Sbjct: 62  NVRSLNCLGGLRVLDIGCGAGLLCEPLSRLGAQVIGVDPSQSNIAAAKLHAD--KSHLAI 119

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           +Y CTT E+ ++ + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ ++
Sbjct: 120 DYRCTTVEE-IDPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKS 178

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +A AI+ AE++L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS
Sbjct: 179 FALAIVGAEYVLRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWTLS 238

Query: 332 DDISVNFI 339
            D+ VN++
Sbjct: 239 SDMDVNYM 246


>gi|398826721|ref|ZP_10584958.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           YR681]
 gi|398220666|gb|EJN07109.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           YR681]
          Length = 256

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/249 (42%), Positives = 159/249 (63%), Gaps = 4/249 (1%)

Query: 92  QLNNNKKHSAP-SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           Q N +   + P S++  AE+AKFS ++  WWD +G   PLH +NP RL +IR   CR F 
Sbjct: 4   QQNTSPSAAQPGSTVDAAEIAKFSKLSAEWWDPKGKMAPLHRINPLRLGYIRDAACRKFE 63

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
           ++  S     GL ++D+GCG G+L EPL+R+GA V G+D  + NI  A+LHAD       
Sbjct: 64  RNVRSLNCLGGLRVLDIGCGAGLLCEPLSRLGAQVIGVDPSQSNIAAAKLHAD--KSHLA 121

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           I+Y CTT E+ ++ + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +
Sbjct: 122 IDYRCTTVEE-IDPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWK 180

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++A AI+ AE++L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+L
Sbjct: 181 SFALAIVGAEYVLRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWAL 240

Query: 331 SDDISVNFI 339
           S D+ VN++
Sbjct: 241 SSDMDVNYM 249


>gi|40062638|gb|AAR37559.1| 3-demethylubiquinone-9 3-methyltransferase [uncultured marine
           bacterium 313]
          Length = 241

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 154/243 (63%), Gaps = 3/243 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WW+  G +KPLH  NP R+ FI+  L  +F  +P +  P + +
Sbjct: 2   TTVDKTEVEKFSKLASDWWNPNGQFKPLHLFNPARIKFIKEKLIYYFGLNPKAQEPLKKI 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +I+D+GCGGG++ EPL R+GATVTGIDA + NI++A+ HA        I+Y   + E L 
Sbjct: 62  SILDIGCGGGLVCEPLKRLGATVTGIDASKNNIEVAKFHA--KEMNLNIDYIKCSPENL- 118

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + KF+ ++  EVIEHVA+   F ++ S L    G   ++TIN+++++Y  A++ AE+I
Sbjct: 119 KFKNKFNVILNLEVIEHVANVDLFIENCSTLIEKNGIMFVATINKNLKSYLYAVLGAEYI 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH W  FLTP+EL +I  R +  + E+ G  +N  + +W  S D SVN+I+  
Sbjct: 179 LRWLPIGTHDWEKFLTPQELEIIAIRNNFTMDEIVGMKFNLFSKKWFKSSDASVNYISTF 238

Query: 343 TKN 345
           +KN
Sbjct: 239 SKN 241


>gi|163793927|ref|ZP_02187901.1| ubiquinone biosynthesis O-methyltransferase [alpha proteobacterium
           BAL199]
 gi|159181038|gb|EDP65555.1| ubiquinone biosynthesis O-methyltransferase [alpha proteobacterium
           BAL199]
          Length = 239

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/239 (46%), Positives = 152/239 (63%), Gaps = 12/239 (5%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIR--STLCRHFRKDPYSARPFEGL 162
           +  A++ +F+ +AD WWD +GP+ PLH   P R+A IR  +      RKD    RP  GL
Sbjct: 1   MDAADIGRFARMADRWWDPDGPHGPLHRYVPARMAIIRDAARTVASDRKD--QRRPMAGL 58

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAE 219
           +++D+GCGGG+LSEP+ R+GATVTG+DA    I  A  HA    LD     I Y    AE
Sbjct: 59  SVLDIGCGGGLLSEPMTRLGATVTGVDADTAGIAAAVSHAAGVGLD-----IAYRAGAAE 113

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L  E R FD V+ASEVIEHVAD   F ++L+AL    G  V++TINR+ R+YA AI+AA
Sbjct: 114 DLATEGRVFDMVVASEVIEHVADRDAFAEALAALVRPGGLLVLTTINRTRRSYAMAIVAA 173

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           E++L W+P+GTH WS F TP+EL  +L++    V+   G VY+ ++G +S S D  VN+
Sbjct: 174 EYVLRWVPRGTHDWSKFPTPDELTGLLEQRGFAVETPIGLVYSAVSGSFSPSSDDRVNY 232


>gi|399037198|ref|ZP_10734077.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. CF122]
 gi|398065190|gb|EJL56841.1| ubiquinone biosynthesis O-methyltransferase [Rhizobium sp. CF122]
          Length = 249

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 106/246 (43%), Positives = 153/246 (62%), Gaps = 2/246 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR     +F +D  SA+P
Sbjct: 3   EAAKSTIDQEEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDRAAENFGRDIRSAKP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            +GL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA        ++Y   TA
Sbjct: 63  LDGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EQLAEAGETFDIVLNMEVVEHVADVDFFLTTCAGMVRPGGLMFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTHQ+   + PEE+   +    + + +  G  +NPL+ +W+LS D+ VN+
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEEIEKPVTANGLSIIDRTGVFFNPLSNQWNLSKDMDVNY 240

Query: 339 IAFGTK 344
           +    +
Sbjct: 241 MMLAKR 246


>gi|387016340|gb|AFJ50289.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like
           [Crotalus adamanteus]
          Length = 334

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/253 (41%), Positives = 154/253 (60%), Gaps = 3/253 (1%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           ++ +S   ++   EL +F  +A  WWD +G Y  LH++N  R+ FIR T+  + R D   
Sbjct: 58  DQPYSTWQTVDPEELRRFQRLAHKWWDEDGDYAALHSMNDIRVPFIRDTIL-NLRNDHQP 116

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE-TSTIEYC 214
             P   + I+DVGCGGG+L+EPLAR+GA+VTGID +E +I+ A LH   DP  T  I+Y 
Sbjct: 117 GSPLFNMKILDVGCGGGLLTEPLARLGASVTGIDPLEDSIRTAELHKSFDPALTKRIQYR 176

Query: 215 CTTAEKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
               E +VEE   +FD V+ASEV+EHVAD  +F K    +   EG+  I+T+N++  +Y 
Sbjct: 177 ACALEDIVEEGSEQFDIVVASEVVEHVADVEKFIKCFGEVLKPEGSLFITTLNKTQLSYI 236

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ AE +L  +P GTH W  F++PEEL  +L+     VK + G +YNPL G WS + +
Sbjct: 237 FGIVIAEKLLGIVPVGTHDWDKFISPEELERLLESNGFSVKVVKGMLYNPLFGSWSWTGN 296

Query: 334 ISVNFIAFGTKNS 346
            S+N+     K+S
Sbjct: 297 TSINYALHAIKSS 309


>gi|308807547|ref|XP_003081084.1| dihydroxypolyprenylbenzoate methyltransferase (ISS) [Ostreococcus
           tauri]
 gi|116059546|emb|CAL55253.1| dihydroxypolyprenylbenzoate methyltransferase (ISS) [Ostreococcus
           tauri]
          Length = 351

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/272 (42%), Positives = 158/272 (58%), Gaps = 5/272 (1%)

Query: 78  ASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWW-DAEGPYKPLHALNPT 136
           A  +P     E  +  N  +  ++   +   E AKF   A  WW +  GP+  LHA+NPT
Sbjct: 70  APSTPRARRPEVDAPPNAPRSSASAGQVDPNERAKFERDAALWWNETRGPFAALHAMNPT 129

Query: 137 RLAFIRSTLCRHFRKDPYS---ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEK 193
           R+AF+R  +   F++   +        G  ++DVGCGGGI +E LAR+GA VT IDA   
Sbjct: 130 RVAFVRDAMREQFKETLGTNAMRDALRGTRVLDVGCGGGIFAESLARLGADVTAIDAGLA 189

Query: 194 NIKIARLHADLDPE-TSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSA 252
           NI+IAR HA  DP     + Y    AE L +    FDAV + EVIEHV+DP  F KSL  
Sbjct: 190 NIEIARAHAARDPGLDGRLRYEHVAAEALGDRGETFDAVTSLEVIEHVSDPMGFAKSLGK 249

Query: 253 LTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASID 312
           L    GA  +STINR+ R++A AI+ AE  L  +P GTH +S FLTP E+ L+  R+  +
Sbjct: 250 LVRPGGALFLSTINRTARSFAFAIVGAERALGLVPPGTHSFSKFLTPGEVALLASRSGCE 309

Query: 313 VKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           ++E+AG VY+P+   W+LS D+ +NFIA   K
Sbjct: 310 MRELAGMVYDPIRNTWALSTDVQINFIAHCVK 341


>gi|449271555|gb|EMC81861.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial,
           partial [Columba livia]
          Length = 282

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 105/245 (42%), Positives = 149/245 (60%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   E+ KF  +A  WWD EG Y  LH++N  R+ FIR TL  +   + +   P  G+
Sbjct: 11  SSVDSEEMKKFQLLAHKWWDEEGEYSALHSMNDIRVPFIRDTLL-NMSSNYHLGNPLSGV 69

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+LSEPL R+GA VTGID +E NI+ A  H   DP  +  I+Y  ++ E++
Sbjct: 70  KILDVGCGGGLLSEPLGRLGALVTGIDPLEDNIRTADQHKSFDPVLAKRIQYKSSSLEEI 129

Query: 222 VEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE    FD ++ASEV+EHVAD   F K  S +   EG+  I+TIN++  +Y   I+ AE
Sbjct: 130 VEECMETFDVIVASEVVEHVADLEMFIKCCSQVLKPEGSLFITTINKTQLSYILGIVVAE 189

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I+  +P+GTH+W  F+ PEEL  +L+     VK + G +YNPL G WS  +   +N+  
Sbjct: 190 KIIGVVPEGTHKWEKFVPPEELERLLESNGFSVKTVKGMLYNPLLGSWSWMESTDINYAL 249

Query: 341 FGTKN 345
              K+
Sbjct: 250 HAVKS 254


>gi|374623439|ref|ZP_09695949.1| ubiquinone biosynthesis O-methyltransferase [Ectothiorhodospira sp.
           PHS-1]
 gi|373942550|gb|EHQ53095.1| ubiquinone biosynthesis O-methyltransferase [Ectothiorhodospira sp.
           PHS-1]
          Length = 275

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/253 (41%), Positives = 148/253 (58%), Gaps = 8/253 (3%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N  +   PSS+   E+A+++A+AD WWD  GP+ PLH LN  R  +I   LC H  +DP 
Sbjct: 10  NLSEAPKPSSIDPDEVARYTALADRWWDESGPFWPLHTLNRLRTDYICQRLCAHLGRDPS 69

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTI 211
           + RP  GL ++D+GCGGGILSE +AR+GA V G+D  E+NI +ARLHA    LD     I
Sbjct: 70  APRPLTGLRLLDIGCGGGILSESMARLGARVEGVDVTERNIAVARLHAARSGLD-----I 124

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           +Y     E L   + ++D V+  EV+EHVAD   F  + + L    G + I+TINR+  +
Sbjct: 125 QYEAVPVETLAARKEQYDVVLNMEVVEHVADLPGFMAACNQLVRPGGYSFIATINRNPVS 184

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +  AI+ AE+IL WLP+GTHQW  F  P EL  +L    + V E  G   NP      L+
Sbjct: 185 FIVAILGAEYILRWLPRGTHQWRRFPKPAELEALLAPDGLQVLERTGVRVNPFNRGMYLT 244

Query: 332 DDISVNFIAFGTK 344
             + VN++   T+
Sbjct: 245 GYLGVNYMLMTTR 257


>gi|410959722|ref|XP_003986450.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Felis catus]
          Length = 370

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 105/246 (42%), Positives = 155/246 (63%), Gaps = 3/246 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    D    +P  G+
Sbjct: 91  TTVDSSEVKTFLALAHRWWDEQGIYAPLHSMNDLRVPFIRDNLLKTV-ADHQPGKPLSGM 149

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+VTGID V++NIK A+ H   DP     IEY   + E++
Sbjct: 150 KILDVGCGGGLLTEPLGRLGASVTGIDPVDENIKTAQHHKSFDPILDKRIEYRACSLEEI 209

Query: 222 VEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+ AE
Sbjct: 210 VEETTEAFDAVVASEVVEHVIDLETFIQCCCQVLKPGGSLFITTINKTQLSYALGIVFAE 269

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE+L  IL+   + V+ +AG +YNP +G W  S++ S+N+ A
Sbjct: 270 QIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQSVAGMLYNPFSGYWHWSENTSLNYAA 329

Query: 341 FGTKNS 346
              K+ 
Sbjct: 330 HAVKSG 335


>gi|118088772|ref|XP_419824.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Gallus gallus]
          Length = 343

 Score =  213 bits (543), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ SS+   E+ KF  +A  WWD +G Y  LH++N  R+ FIR T+  +         P 
Sbjct: 69  TSQSSVDPKEMRKFQLLAHRWWDEQGEYSALHSMNDIRVPFIRDTVL-NMGSAYQRGSPL 127

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+LSEPL R+GA+VTGID +E+NI+ A  H   DP  +  I+Y C + 
Sbjct: 128 SGVKILDVGCGGGLLSEPLGRLGASVTGIDPLEENIRAADQHKSFDPVLAKRIQYKCGSL 187

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FD ++ASEV+EHVAD   F K  S +    G+  I+TIN++  +Y   I+
Sbjct: 188 EEIVEESVETFDVIVASEVVEHVADLEMFIKCCSQVLKPGGSLFITTINKTQLSYILGIV 247

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE I   +P+GTH+W  F+ PEEL  +L+  S  VK + G +YNPLTG WS  +  S+N
Sbjct: 248 VAEKIAGIVPEGTHEWEKFVPPEELERLLEANSFSVKTVNGMLYNPLTGSWSWIESTSIN 307

Query: 338 FIAFGTKN 345
           +     K+
Sbjct: 308 YALHAVKS 315


>gi|406989722|gb|EKE09466.1| hypothetical protein ACD_16C00165G0005 [uncultured bacterium]
          Length = 244

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 145/239 (60%), Gaps = 2/239 (0%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL  F   + TWWD  GP+  LHAL P RLAFI+  +  HF+    S+   +GL I+D
Sbjct: 8   QAELDHFKGHSATWWDERGPFFVLHALLPLRLAFIKEKVGVHFQAPDKSSLSLKGLRILD 67

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR 226
           VGCGGG+L EPLAR+GA VTGID V++NI IA+ HA        I Y     E L     
Sbjct: 68  VGCGGGLLCEPLARLGADVTGIDPVKENILIAKRHAK--DRGLKISYLPCAVEDLPANTS 125

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD ++ASE+IEHV  P EF  +        G   ++T+N+++++Y   I+AAE+IL W+
Sbjct: 126 AFDVIVASEIIEHVDHPEEFLNTCVKHLAPHGGIFMTTLNKTLKSYILGIVAAEYILRWV 185

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           P+GTH W  F+ PE+LV +L++    ++EMAG  ++  T RW  +  + VN+  +G ++
Sbjct: 186 PRGTHSWEKFIKPEDLVKMLKKLGFGIQEMAGVTFSLSTWRWEFTPSLDVNYFLWGARH 244


>gi|384213950|ref|YP_005605113.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
           japonicum USDA 6]
 gi|354952846|dbj|BAL05525.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium
           japonicum USDA 6]
          Length = 257

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 153/237 (64%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 17  STVDAAEIAKFSKLSAEWWDPNGKMAPLHRINPLRLGYIRDAACRKFERNVRSLNCLGGL 76

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EPL+R+GA V G+D    NI  A+LHAD      +I+Y CTT E+ +
Sbjct: 77  RVLDIGCGAGLLCEPLSRLGAQVIGVDPSVSNIAAAKLHAD--KSHLSIDYRCTTVEE-I 133

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 134 DPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKSFALAIVGAEYV 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS D+ VN++
Sbjct: 194 LRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWALSSDMDVNYM 250


>gi|374572184|ref|ZP_09645280.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           WSM471]
 gi|374420505|gb|EHR00038.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           WSM471]
          Length = 257

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 152/237 (64%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 17  STVDAAEIAKFSKLSAEWWDPNGKMAPLHRINPLRLGYIRDAACRKFERNARSLNCLGGL 76

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EPL+R+GA V G+D    NI  A+LHAD       I+Y CTT E+ +
Sbjct: 77  RVLDIGCGAGLLCEPLSRLGAQVIGVDPSVSNIAAAKLHAD--KAHLAIDYRCTTVEE-I 133

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 134 DPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKSFALAIVGAEYV 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS D+ VN++
Sbjct: 194 LRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWTLSSDMDVNYM 250


>gi|145350186|ref|XP_001419497.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579729|gb|ABO97790.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 218

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 109/218 (50%), Positives = 143/218 (65%), Gaps = 4/218 (1%)

Query: 133 LNPTRLAFIRSTLCRHFRKDPYSARP---FEGLNIVDVGCGGGILSEPLARMGATVTGID 189
           +NP R+ FIR  L   +        P     GL I+DVGCGGGIL+E LAR+GA VT ID
Sbjct: 1   MNPVRVRFIRDGLVGQYGDVLGGNGPGAALRGLKILDVGCGGGILAESLARLGAQVTAID 60

Query: 190 AVEKNIKIARLHADLDPE-TSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCK 248
           A   NI IAR HA+LDP+    ++Y   TAE+LVE    FD V + EVIEHV DP EF K
Sbjct: 61  AGAANIAIARAHAELDPDLVKNLKYEAVTAEELVERGETFDCVTSLEVIEHVTDPLEFTK 120

Query: 249 SLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQR 308
           S++ L   +GA  +STINR+ R++A AI+AAE +L  +P GTHQ+S FLTP E+ ++   
Sbjct: 121 SIAKLVKPKGALFVSTINRTARSFAFAILAAERVLGLVPPGTHQFSKFLTPGEIAMMAGH 180

Query: 309 ASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           A+ ++ E+AG VY+PL  +WSLS D  +NFIA   K+S
Sbjct: 181 ANCEMVELAGMVYDPLRNKWSLSSDTQINFIAHCVKSS 218


>gi|189183833|ref|YP_001937618.1| 3-demethylubiquinone-9 3-methyltransferase [Orientia tsutsugamushi
           str. Ikeda]
 gi|189180604|dbj|BAG40384.1| 3-demethylubiquinone-9 3-methyltransferase [Orientia tsutsugamushi
           str. Ikeda]
          Length = 246

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 154/242 (63%), Gaps = 3/242 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF+ IA+ WW+  G +K LH +NP R+ FI+  +  H+       RPF GL
Sbjct: 5   STIDQEEIEKFNTIANEWWNPNGKFKQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I D+GCGGGI S P+A++GATVTGIDA  KNI +A+++A  +   + + Y  ++ E+ V
Sbjct: 65  KIADIGCGGGITSIPMAKLGATVTGIDASSKNIAVAKMYA--NKIGAQVNYIHSSIEEYV 122

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           +    K+D V+  EVIEHV++   F   LS +    G  +ISTIN+++++Y  AI  AE+
Sbjct: 123 KISNEKYDVVLCLEVIEHVSNIQSFILYLSKILKHGGMAIISTINKTLKSYVFAIGLAEY 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L +LP GTH ++ FL P  +  IL   ++ +KE+ G  YNP+  +W L++DISVN+I +
Sbjct: 183 LLGYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYIMY 242

Query: 342 GT 343
            T
Sbjct: 243 IT 244


>gi|386399807|ref|ZP_10084585.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           WSM1253]
 gi|385740433|gb|EIG60629.1| ubiquinone biosynthesis O-methyltransferase [Bradyrhizobium sp.
           WSM1253]
          Length = 257

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 152/237 (64%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 17  STVDAAEIAKFSKLSAEWWDPNGKMAPLHRINPLRLGYIRDAACRKFERNLRSLNCLGGL 76

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EPL+R+GA V G+D    NI  A+LHAD       I+Y CTT E+ +
Sbjct: 77  RVLDIGCGAGLLCEPLSRLGAQVIGVDPSVSNIAAAKLHAD--KAHLAIDYRCTTVEE-I 133

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 134 DPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKSFALAIVGAEYV 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS D+ VN++
Sbjct: 194 LRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWTLSSDMDVNYM 250


>gi|148284890|ref|YP_001248980.1| ubiquinone biosynthesis O-methyltransferase [Orientia tsutsugamushi
           str. Boryong]
 gi|146740329|emb|CAM80736.1| Ubiquinone biosynthesis O-methyltransferase [Orientia tsutsugamushi
           str. Boryong]
          Length = 246

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 152/242 (62%), Gaps = 3/242 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF+ IA+ WW+  G +  LH +NP R+ FI+  +  H+       RPF GL
Sbjct: 5   STIDQDEIEKFNTIANEWWNPNGKFNQLHLMNPARIRFIKQKILLHYNLIDSITRPFHGL 64

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD-LDPETSTIEYCCTTAEKL 221
            I D+GCGGGI S P+A++GATVTGIDA  KNI +AR+HA+ +  + + I        K+
Sbjct: 65  KIADIGCGGGITSIPMAKLGATVTGIDASCKNIAVARMHANKIGIQVNYIHSSIEEYAKI 124

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E  K+D V+  EVIEHV++   F   LS +   EG  +ISTIN+++++Y  AI  AE+
Sbjct: 125 SNE--KYDVVLCLEVIEHVSNIQSFILYLSKILKLEGMLIISTINKTLKSYVFAIGLAEY 182

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L +LP GTH ++ FL P  +  IL   ++ +KE+ G  YNP+  +W L++DISVN+I +
Sbjct: 183 LLRYLPIGTHDFNKFLKPSTINNILLSHNMTLKEIQGLSYNPILQQWRLTNDISVNYIMY 242

Query: 342 GT 343
            T
Sbjct: 243 IT 244


>gi|297789283|ref|XP_002862624.1| hypothetical protein ARALYDRAFT_359489 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308261|gb|EFH38882.1| hypothetical protein ARALYDRAFT_359489 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 132

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 95/124 (76%), Positives = 113/124 (91%)

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L +E RKFDAV++ EVIEHVA+PAEFCKSLSALT+  GAT++ST+NR+MRAYA+ I+ AE
Sbjct: 2   LADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATILSTVNRTMRAYASTIVGAE 61

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +IL WLP GTHQWSSF+TPEEL +ILQRAS+DVKEMAGFVYNP+TGRW LSDDISVN+IA
Sbjct: 62  YILRWLPIGTHQWSSFVTPEELSMILQRASVDVKEMAGFVYNPITGRWLLSDDISVNYIA 121

Query: 341 FGTK 344
           +GTK
Sbjct: 122 YGTK 125


>gi|156386609|ref|XP_001634004.1| predicted protein [Nematostella vectensis]
 gi|156221082|gb|EDO41941.1| predicted protein [Nematostella vectensis]
          Length = 300

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 98/246 (39%), Positives = 155/246 (63%), Gaps = 1/246 (0%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           N++K +   S++   E+A+ S     WWDA G +  LH +N  R+ +I+  +     +  
Sbjct: 48  NHSKSNEWQSTIDDDEVARLSRSGMDWWDANGEFIALHTMNRVRVPYIKKAVLGVQGEML 107

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIE 212
            S++P +G  ++DVGCGGG+L+EPLAR+GA VTGIDA  +N  +A  HA LDP  +  ++
Sbjct: 108 TSSKPLDGFKMLDVGCGGGLLAEPLARLGAKVTGIDASARNTHVAMRHASLDPSLAGKLQ 167

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y C T E+L +E++ FD V++SEVIEHV +   F  ++S L    G+ +++T+NR+ +AY
Sbjct: 168 YRCITVEQLAQEKKVFDCVVSSEVIEHVTEKESFIGAISQLLKPRGSLILTTMNRTPQAY 227

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+AAE+I H +P GTH W+ F    EL  +LQ   ++ +++ G  +NP+T RWS  +
Sbjct: 228 VLAIVAAEYIAHAVPIGTHDWNKFPKISELTELLQENGLETEDIQGLAFNPVTSRWSYCE 287

Query: 333 DISVNF 338
              +NF
Sbjct: 288 GTDINF 293


>gi|383768858|ref|YP_005447921.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp.
           S23321]
 gi|381356979|dbj|BAL73809.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp.
           S23321]
          Length = 257

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 152/237 (64%), Gaps = 3/237 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS ++  WWD  G   PLH +NP RL +IR   CR F ++  S     GL
Sbjct: 17  STVDAAEIAKFSKLSAEWWDPIGKMAPLHRINPLRLGYIRDAACRKFERNVRSLNCLGGL 76

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCG G+L EPL+R+GA V G+D    NI  A+LHAD       I+Y CTT E+ +
Sbjct: 77  RVLDIGCGAGLLCEPLSRLGAQVIGVDPSASNIAAAKLHAD--KGHLAIDYRCTTVEE-I 133

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           + + +FD V+A EV+EHV D   F K  +A+    G  V+ST+NR+ +++A AI+ AE++
Sbjct: 134 DPRERFDIVLAMEVVEHVVDVGVFLKRCAAMLKPNGLMVVSTLNRNWKSFALAIVGAEYV 193

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTH+W+ F+TP+EL   L    + + E  G VY+P   +W+LS D+ VN++
Sbjct: 194 LRWLPRGTHEWNKFVTPDELTKYLLDNRLVITEQTGVVYSPFADKWALSSDMDVNYM 250


>gi|426234647|ref|XP_004011304.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Ovis aries]
          Length = 370

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 156/249 (62%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L R    D    +P 
Sbjct: 88  TSQTTVDASEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLRTV-ADHQPGKPL 146

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 147 SGMKILDVGCGGGLLTEPLGRLGASVVGIDPVDENIKTAQHHKSFDPVLDKRIEYRTCSL 206

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++V++    FDAV+ASEV+EHV D   F +    +   EG+  I+TIN++  +YA  I+
Sbjct: 207 EEIVKDTVETFDAVVASEVVEHVIDLETFIQCCFQVLKPEGSLFITTINKTQLSYALGIV 266

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE+L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 267 FSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 326

Query: 338 FIAFGTKNS 346
           + A   K+S
Sbjct: 327 YAAHALKSS 335


>gi|348563339|ref|XP_003467465.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Cavia porcellus]
          Length = 370

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 156/248 (62%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++  +E+  F A+A  WWD EG Y PLH++N  R+ FIR  L +    + +  +P 
Sbjct: 88  AAHTTVDSSEVKTFLALAHKWWDEEGVYAPLHSMNDLRVPFIRDNLLKTM-ANHHPGKPL 146

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 147 SGMKILDVGCGGGLLTEPLGRLGASVFGIDPVDENIKTAQHHKAFDPVLDKRIEYKVCSL 206

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++ EE +  FDAVIASEV+EHVAD   F +    +    G+  I+TIN++  +Y   I+
Sbjct: 207 EEIAEETEDTFDAVIASEVVEHVADLETFIQCCCRVLKHGGSLFITTINKTQLSYVLGIV 266

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG +YNP +G W  S++ S+N
Sbjct: 267 FSEQIAGIVPKGTHTWEKFISPEKLESILESNGLLVQTVAGMIYNPFSGHWHWSENTSLN 326

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 327 YAAHAVKS 334


>gi|301773216|ref|XP_002922028.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 370

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 157/249 (63%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++ ++E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +         +P 
Sbjct: 88  TSQTTVDNSEIKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTVAHHQ-PGKPL 146

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+LSEPL R+GA+V GID V++NIKIA+ H   DP     IEY   + 
Sbjct: 147 SGMKILDVGCGGGLLSEPLGRLGASVIGIDPVDENIKIAQHHKSFDPVLDKRIEYRACSL 206

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE     DAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 207 EEIVEETAETCDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 266

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG +YNPL+G W  S++ S+N
Sbjct: 267 FSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVAGMLYNPLSGYWHWSENTSLN 326

Query: 338 FIAFGTKNS 346
           + A   K++
Sbjct: 327 YAAHAVKST 335


>gi|281343625|gb|EFB19209.1| hypothetical protein PANDA_010959 [Ailuropoda melanoleuca]
          Length = 339

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 157/249 (63%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++ ++E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +         +P 
Sbjct: 57  TSQTTVDNSEIKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTVAHHQ-PGKPL 115

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+LSEPL R+GA+V GID V++NIKIA+ H   DP     IEY   + 
Sbjct: 116 SGMKILDVGCGGGLLSEPLGRLGASVIGIDPVDENIKIAQHHKSFDPVLDKRIEYRACSL 175

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE     DAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 176 EEIVEETAETCDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 235

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG +YNPL+G W  S++ S+N
Sbjct: 236 FSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVAGMLYNPLSGYWHWSENTSLN 295

Query: 338 FIAFGTKNS 346
           + A   K++
Sbjct: 296 YAAHAVKST 304


>gi|308153295|ref|NP_001184015.1| coenzyme Q3 homolog, methyltransferase [Xenopus laevis]
          Length = 343

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/268 (42%), Positives = 157/268 (58%), Gaps = 6/268 (2%)

Query: 81  SPSINTAENHSQL-NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           S S N  EN   L +N++ ++   ++   E+ KF A    WWD EG +  LHALN  R+ 
Sbjct: 52  SVSSNETENRGNLCHNSRLYTTSQTVDPLEMRKFQAWVLKWWDEEGIFSVLHALNDIRVP 111

Query: 140 FIRSTLC-RHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIA 198
           FIR  L  R++  D     P  G+ ++DVGCGGG+L EPL R+GA+VTGID +E NIKIA
Sbjct: 112 FIRDILMSRNYEHD--VGCPLSGVKLLDVGCGGGLLCEPLGRLGASVTGIDPLEDNIKIA 169

Query: 199 RLHADLDPETST-IEYCCTTAEKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVS 256
            LH   DP     ++Y   T E+LV+     FDAV+ASEV+EHVAD   F +S   +   
Sbjct: 170 ALHKSFDPVLEKHVQYKSCTVEELVDGHLGYFDAVVASEVLEHVADVESFIQSCFHVLKP 229

Query: 257 EGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEM 316
            G+  I+TIN++  +YA AI+ AE I+   P+GTH W  F+ PEEL  +L+     V+ +
Sbjct: 230 GGSLFITTINKTKLSYALAIVVAEKIMGIAPEGTHDWEKFIPPEELERLLESNGYVVEAL 289

Query: 317 AGFVYNPLTGRWSLSDDISVNFIAFGTK 344
            G +YNP +G W    D SVN+     K
Sbjct: 290 RGMLYNPFSGSWRWISDNSVNYALHAVK 317


>gi|395851462|ref|XP_003798273.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Otolemur garnettii]
          Length = 343

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 152/245 (62%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  F  +A  WWD +G Y PLH++N  R+ FIR  L +    +    +P  G+
Sbjct: 64  TTVDSSEIKTFLVLAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPLSGM 122

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + E++
Sbjct: 123 KILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQRHKSFDPVLDKRIEYRACSLEEI 182

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  II +E
Sbjct: 183 VEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIIFSE 242

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE+L  IL+   + V+ +AG +YNP +G W  S++ S+N+ A
Sbjct: 243 QIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVQTVAGMLYNPFSGYWHWSENTSINYAA 302

Query: 341 FGTKN 345
              K+
Sbjct: 303 HAVKS 307


>gi|118600965|ref|NP_059117.3| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Homo
           sapiens]
 gi|313104241|sp|Q9NZJ6.3|COQ3_HUMAN RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-10 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; Flags: Precursor
          Length = 369

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 154/248 (62%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIASIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A+  K+
Sbjct: 326 YAAYAVKS 333


>gi|351706581|gb|EHB09500.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Heterocephalus glaber]
          Length = 311

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 163/265 (61%), Gaps = 3/265 (1%)

Query: 83  SINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIR 142
           S+N  +++ QL      ++ +++   E+  F A+A  WWD EG + PLH++N  R+ FIR
Sbjct: 12  SLNRMKSYWQLWTRLYSTSQTTVDSNEVKTFLAMAHKWWDEEGMFAPLHSMNDLRVPFIR 71

Query: 143 STLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA 202
             L +    + +  +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H 
Sbjct: 72  DNLLKTV-ANHHPGKPLSGMKILDVGCGGGLLTEPLGRLGASVFGIDPVDENIKTAQHHK 130

Query: 203 DLDPETST-IEY-CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGAT 260
             DP     IEY  C+  E + E +  FDAVIASEV+EHVAD   F +    +    G+ 
Sbjct: 131 AFDPVLDKRIEYRVCSLEEIVEETEETFDAVIASEVVEHVADLETFIQCCRQVLKPTGSL 190

Query: 261 VISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFV 320
            I+TIN++  +YA  I+ AE I   +PKGTH W  F++PE+L  IL+   + V+ +AG +
Sbjct: 191 FITTINKTQLSYALGIVFAEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVAGML 250

Query: 321 YNPLTGRWSLSDDISVNFIAFGTKN 345
           YNP +G W  +++ S+N+ A   K+
Sbjct: 251 YNPFSGYWHWNENTSLNYAAHAVKS 275


>gi|326916157|ref|XP_003204377.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Meleagris gallopavo]
          Length = 291

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/248 (41%), Positives = 150/248 (60%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ SS+   EL KF  +A  WWD +G Y  LH++N  R+ FIR T+  +         P 
Sbjct: 17  ASQSSVDPKELRKFQLLAHRWWDEQGEYSALHSMNDIRVPFIRDTVL-NMGNTYQRGSPL 75

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+LSEPL R+GA+VTGID +E+NI++A  H   DP  +  I+Y  ++ 
Sbjct: 76  SGIKILDVGCGGGLLSEPLGRLGASVTGIDPLEENIRVADQHKSFDPVLAKRIQYKSSSL 135

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FD ++ASEV+EHVAD   F K    +    G+  ++TIN++  +Y   I+
Sbjct: 136 EEIVEESVEMFDVIVASEVVEHVADLEMFIKCCCQVLKPGGSLFVTTINKTQLSYILGIV 195

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE I   +P+GTH W  F+ PEEL  +L+     VK + G +YNPLTG WS  +  S+N
Sbjct: 196 VAEKIAGIVPEGTHDWEKFVPPEELEQLLEANGFSVKTVNGILYNPLTGSWSWIESTSIN 255

Query: 338 FIAFGTKN 345
           +     K+
Sbjct: 256 YALHAVKS 263


>gi|395534676|ref|XP_003769365.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Sarcophilus harrisii]
          Length = 298

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 151/250 (60%), Gaps = 3/250 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H+  +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    + +   P
Sbjct: 27  HNTSTTVDPNEMKTFQALAYKWWDEQGAYAPLHSMNDLRVPFIRDNLLKMI-TNHHLESP 85

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTT 217
             G+ I+DVGCGGG+LSEPL R+GA VTGID + +NIK A+ H   DP     I+Y   +
Sbjct: 86  LSGMKILDVGCGGGLLSEPLGRLGALVTGIDPLNENIKTAQQHKSFDPILDKRIQYKACS 145

Query: 218 AEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            E +VEE    FDAV+ASEV+EHV D   F +    +    G+  ++TIN++  +YA  I
Sbjct: 146 LEDIVEETAETFDAVVASEVVEHVNDLETFIQCCCQVLKPGGSLFLTTINKTHLSYALGI 205

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE I   +PKGTH W  F++PEEL  +L+   + V+ + G +YNP +G W  ++  S+
Sbjct: 206 IFAEQIAGIVPKGTHTWEKFVSPEELESLLESNGLLVQTITGMLYNPFSGYWRWTEHTSL 265

Query: 337 NFIAFGTKNS 346
           N+ A   K+S
Sbjct: 266 NYAAHAIKSS 275


>gi|218513832|ref|ZP_03510672.1| 3-demethylubiquinone-9 3-methyltransferase [Rhizobium etli 8C-3]
          Length = 247

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 104/230 (45%), Positives = 144/230 (62%), Gaps = 2/230 (0%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
             A S++   E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +D  S RP
Sbjct: 3   EGARSTIDQGEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACANFGRDQKSPRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  +KNI IA  HA        ++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSDKNIGIASTHAKAS--GVPVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELAEAGETFDIVLNMEVVEHVADVEFFMTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
           AE+IL WLP+GTHQ+   + PEEL   L  + +++ +  G  +NPL+ +W
Sbjct: 181 AENILRWLPRGTHQYEKLVRPEELEKPLAASGLEITDRTGVFFNPLSNQW 230


>gi|7673361|gb|AAF66826.1|AF193016_1 methyltransferase COQ3 [Homo sapiens]
          Length = 310

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 28  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 86

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 87  LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 146

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 147 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 206

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 207 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 266

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 267 YAAHAVKS 274


>gi|73973935|ref|XP_532241.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Canis lupus familiaris]
          Length = 367

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/239 (42%), Positives = 149/239 (62%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +         +P  G+ I+DVG
Sbjct: 94  EIKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTVAHHQ-PGKPLSGMKILDVG 152

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
           CGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + E++V+E  +
Sbjct: 153 CGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLDKRIEYRACSLEEIVQETAE 212

Query: 228 -FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+ AE I   +
Sbjct: 213 TFDAVVASEVVEHVIDLETFIQCCCEVLKPGGSLFITTINKTQLSYALGIVFAEQIAGIV 272

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ + G +YNPL+G W  S++ S+N+ A   K+
Sbjct: 273 PKGTHTWEKFISPEKLESILESNGLSVQTVTGMLYNPLSGYWHWSENTSLNYAAHAVKS 331


>gi|119568867|gb|EAW48482.1| coenzyme Q3 homolog, methyltransferase (yeast) [Homo sapiens]
          Length = 369

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 153/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIASIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|402867735|ref|XP_003897992.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Papio anubis]
          Length = 369

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGIYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKNS 346
           + A   K+ 
Sbjct: 326 YAAHAVKSG 334


>gi|39795441|gb|AAH63463.1| Coenzyme Q3 homolog, methyltransferase (S. cerevisiae) [Homo
           sapiens]
 gi|193787009|dbj|BAG51832.1| unnamed protein product [Homo sapiens]
 gi|307685877|dbj|BAJ20869.1| coenzyme Q3 homolog, methyltransferase [synthetic construct]
 gi|312152070|gb|ADQ32547.1| coenzyme Q3 homolog, methyltransferase (S. cerevisiae) [synthetic
           construct]
          Length = 369

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 153/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|397507882|ref|XP_003824410.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Pan paniscus]
          Length = 369

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|262277611|ref|ZP_06055404.1| 3-demethylubiquinone-9 3-O-methyltransferase [alpha proteobacterium
           HIMB114]
 gi|262224714|gb|EEY75173.1| 3-demethylubiquinone-9 3-O-methyltransferase [alpha proteobacterium
           HIMB114]
          Length = 243

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 145/237 (61%), Gaps = 4/237 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF+ +A+ WW+ +G + PLH  NP R  ++ + +   F KD   ++PF  L+I+DVG
Sbjct: 11  EIEKFNKLAEEWWNPKGKFAPLHKFNPVRQEYLVNEISSQFAKDLDQSKPFNNLDILDVG 70

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+L EPL R+GA VTGIDA + NI++A++H  +      I Y     E+++   +KF
Sbjct: 71  CGGGLLCEPLCRLGANVTGIDAAKTNIEVAKIH--MKQNDLKINYINIKPEEII--NQKF 126

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D ++  E+IEHV D   F +S   L    G    +T+N++++++A AI+ AE++L WLP 
Sbjct: 127 DVILCMEIIEHVEDVNFFIESCVNLLKPNGIIFFATLNKTLKSFALAIVGAEYVLRWLPI 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           GTH W  F++P +++  + +  +   E  G  +NP   +WSLS D  VN++ +  KN
Sbjct: 187 GTHDWKKFISPNDIINKVSKHLLTHIETKGVTFNPFNNKWSLSSDTDVNYMCYFKKN 243


>gi|114608606|ref|XP_527458.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial isoform 2 [Pan troglodytes]
 gi|410210860|gb|JAA02649.1| coenzyme Q3 homolog, methyltransferase [Pan troglodytes]
 gi|410246828|gb|JAA11381.1| coenzyme Q3 homolog, methyltransferase [Pan troglodytes]
 gi|410306076|gb|JAA31638.1| coenzyme Q3 homolog, methyltransferase [Pan troglodytes]
          Length = 369

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|355561924|gb|EHH18556.1| hypothetical protein EGK_15187 [Macaca mulatta]
          Length = 370

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 88  TSQTTVDSGEVKTFLALAHKWWDEQGIYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 146

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 147 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 206

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 207 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIV 266

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 267 FSEQIAAIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 326

Query: 338 FIAFGTKNS 346
           + A   K+ 
Sbjct: 327 YAAHAVKSG 335


>gi|380813710|gb|AFE78729.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Macaca mulatta]
 gi|383419161|gb|AFH32794.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Macaca mulatta]
          Length = 368

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 86  TSQTTVDSGEVKTFLALAHKWWDEQGIYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 144

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 145 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 204

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 205 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIV 264

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 265 FSEQIAAIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 324

Query: 338 FIAFGTKNS 346
           + A   K+ 
Sbjct: 325 YAAHAVKSG 333


>gi|355748769|gb|EHH53252.1| hypothetical protein EGM_13857 [Macaca fascicularis]
          Length = 370

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 88  TSQTTVDSGEVKTFLALAHKWWDEQGIYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 146

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 147 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 206

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 207 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIV 266

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 267 FSEQIAAIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 326

Query: 338 FIAFGTKNS 346
           + A   K+ 
Sbjct: 327 YAAHAVKSG 335


>gi|417399782|gb|JAA46877.1| Putative methyltransferase [Desmodus rotundus]
          Length = 367

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 104/268 (38%), Positives = 155/268 (57%), Gaps = 12/268 (4%)

Query: 89  NHSQLNNNKKHSAP---------SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           N + LN  K +  P         +++  +E+  F  +A  WWD +G Y PLH++N  R+ 
Sbjct: 68  NFACLNTMKSYRYPWTRLYSTSRTTVDSSEVKTFLTLAHKWWDEQGVYAPLHSMNDLRVP 127

Query: 140 FIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIAR 199
           FIR  L +         +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+
Sbjct: 128 FIRDNLLKTIASHQ-PGKPLSGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQ 186

Query: 200 LHADLDPETST-IEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSE 257
            H   DP     +EY   + E++VEE    FDAV+ASEV+EHV D   F +    +    
Sbjct: 187 HHKSFDPVLDKRVEYRVCSLEEIVEETAETFDAVVASEVVEHVIDLETFIQCCCQVLKPG 246

Query: 258 GATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMA 317
           G+  I+TIN++  +YA  I+ +E I   +PKGTH W  F++PE L  IL+   + V+ + 
Sbjct: 247 GSLFITTINKTQLSYALGIVFSEQIAGIVPKGTHTWEKFVSPENLESILESNGLSVQTVV 306

Query: 318 GFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           G +YNP +G W  S++ S+N+ A   K 
Sbjct: 307 GMIYNPFSGYWHWSENTSLNYAAHAVKQ 334


>gi|115496053|ref|NP_001069678.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Bos
           taurus]
 gi|122140436|sp|Q3T131.1|COQ3_BOVIN RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-n 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; Flags: Precursor
 gi|74267944|gb|AAI02148.1| Coenzyme Q3 homolog, methyltransferase (S. cerevisiae) [Bos taurus]
          Length = 370

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 152/246 (61%), Gaps = 3/246 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L R         +P  G+
Sbjct: 91  TTVDKNEMKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLRTVATHQ-PGKPLSGM 149

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + E++
Sbjct: 150 KILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLDKRIEYRTCSLEEI 209

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           V++    FDAV+ASEV+EHV D   F +    +   +G+  I+TIN++  +YA  I+ +E
Sbjct: 210 VKDTVETFDAVVASEVVEHVIDLETFIQCCFQVLKPDGSLFITTINKTQLSYALGIVFSE 269

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE+L  IL+   + V+ + G +YNP +G W  S++ S+N+ A
Sbjct: 270 QIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAA 329

Query: 341 FGTKNS 346
              K+S
Sbjct: 330 HALKSS 335


>gi|321453645|gb|EFX64861.1| hypothetical protein DAPPUDRAFT_304225 [Daphnia pulex]
          Length = 283

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 154/259 (59%), Gaps = 12/259 (4%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK---DP 153
           + +S  S+L   E+ KFS +A+ WWD  GP+  LH+LN  R+ FIR+ +C H +    + 
Sbjct: 16  RNYSIKSTLSENEIQKFSKMANEWWDVNGPFNGLHSLNKLRVPFIRNGICSHQKSAVVNN 75

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD------LDPE 207
               P  G +I+DVGCGGGILS  L R+GA+VTGID  E+NI  A LHA+      +  E
Sbjct: 76  SPTSPLAGCSILDVGCGGGILSTSLGRLGASVTGIDPSEENITAASLHANKMRLQNVTFE 135

Query: 208 TSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINR 267
            +TIE+       L      FDAV+ASEVIEHV +P  F ++ + L    G+  I+T+NR
Sbjct: 136 VNTIEHFQALNTSL---STTFDAVVASEVIEHVENPKFFIQTCTELLKPGGSLFITTLNR 192

Query: 268 SMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGR 327
           +  + A AI  AE+IL+ +P+GTH W+ F+TP EL+  +  +   ++++ G  YNP   +
Sbjct: 193 TPASLALAICGAEYILNVVPRGTHDWNKFITPGELIDYINSSGCQLRQLCGMAYNPFINK 252

Query: 328 WSLSDDISVNFIAFGTKNS 346
           W  S   SVN+    TK+S
Sbjct: 253 WKWSGITSVNYAVHATKSS 271


>gi|321472577|gb|EFX83546.1| hypothetical protein DAPPUDRAFT_47829 [Daphnia pulex]
          Length = 261

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 143/235 (60%), Gaps = 5/235 (2%)

Query: 113 FSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGG 172
           F   A  WW  EGP++ LHA+NP RL +++  LC  F++D       +GL ++DVGCGGG
Sbjct: 25  FDQFAQGWWRGEGPFEVLHAINPIRLHWLKHRLCGQFQRDEKDPLALKGLRLMDVGCGGG 84

Query: 173 ILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV---EEQRKFD 229
           +++EPL RMGA VTGID V +NI  A  HA L    S I Y  ++ E      E ++ FD
Sbjct: 85  LVTEPLCRMGAQVTGIDLVPQNIACAEEHA-LQQGLSLI-YKASSLEDFAASSENEKAFD 142

Query: 230 AVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKG 289
            VIA EVIEH  DP  F +  + +  S G  ++ST+NR+ R+Y + I+AAE++L W+P+G
Sbjct: 143 GVIAFEVIEHGPDPEGFLRHAAQILSSGGLLMLSTLNRTFRSYLSGIVAAEYLLRWVPRG 202

Query: 290 THQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           TH W +FLTP +L   L+RA ++     G  +  L   W LS D+SVN+ A   K
Sbjct: 203 THTWQAFLTPSDLRWHLRRAGLEEPAFQGLSFALLRQEWHLSTDLSVNYFASAQK 257


>gi|296198836|ref|XP_002746902.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Callithrix jacchus]
          Length = 369

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFVALAHKWWDEQGIYGPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A  H   DP     IEY   + 
Sbjct: 146 SGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTALCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETPETFDAVVASEVVEHVTDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSELIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVIGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           ++A   K+
Sbjct: 326 YVAHSVKS 333


>gi|334324104|ref|XP_001377629.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Monodelphis domestica]
          Length = 354

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 149/250 (59%), Gaps = 3/250 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           HS  +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +   +    + P
Sbjct: 83  HSTSTTVDPKEMKIFQALAFKWWDEQGIYAPLHSMNDLRVPFIRDNLLKMVARHQLES-P 141

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTT 217
             G+ I+DVGCGGG+L EPL R+GA VTGID + +NIK A+ H   DP     I+Y    
Sbjct: 142 LSGMKILDVGCGGGLLCEPLGRLGALVTGIDPLNENIKTAQQHKSFDPILDKRIQYKACI 201

Query: 218 AEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            E +VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA AI
Sbjct: 202 LEDIVEETAESFDAVVASEVVEHVNDLETFIQCCCKVLKPGGSLFITTINKTQLSYALAI 261

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           I AE I   +PKGTH W  F++PE+L   L+   + V+ + G +YNP +G W  +++ S+
Sbjct: 262 IFAEQIAGIVPKGTHTWEKFVSPEQLESFLESNGLLVQTIIGMLYNPFSGYWRWTENTSL 321

Query: 337 NFIAFGTKNS 346
           N+     K+S
Sbjct: 322 NYATHAVKSS 331


>gi|9506505|ref|NP_062060.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Rattus norvegicus]
 gi|457372|gb|AAC37643.1| dihydroxypolyprenylbenzoate methyltransferase [Rattus norvegicus]
 gi|741025|prf||2006285A dihydroxypolyprenylbenzoate methyltransferase
          Length = 286

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 5/251 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCR-HFRKDPYS 155
           K +S   ++   E+  F A+A +WWD +G + PLH++N  R+ FIR  L +     DP  
Sbjct: 25  KLYSTSQTVDSKEVKTFQALAHSWWDEQGKFAPLHSMNDLRVPFIRDNLLKTSTNHDP-- 82

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY- 213
            +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y 
Sbjct: 83  GKPLSGMKILDVGCGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYR 142

Query: 214 CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
            C+  E L E    FDAV+ASEV+EHV +   F +    +    G+  I+T+N++  +Y 
Sbjct: 143 VCSLEETLNENAECFDAVVASEVVEHVNNLEMFIQCCYQVLKPGGSLFITTVNKTQLSYV 202

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  +++
Sbjct: 203 LGIVFSEQIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVETVAGMVYNPFSGYWHWTEN 262

Query: 334 ISVNFIAFGTK 344
            S+N+ A   +
Sbjct: 263 TSLNYAAHAVR 273


>gi|296484101|tpg|DAA26216.1| TPA: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Bos taurus]
          Length = 370

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 152/246 (61%), Gaps = 3/246 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L R         +P  G+
Sbjct: 91  TTVDRNEVKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLRTVATHQ-PGKPLSGM 149

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + E++
Sbjct: 150 KILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLDKRIEYRTCSLEEI 209

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           V++    FDAV+ASEV+EHV D   F +    +   +G+  I+TIN++  +YA  I+ +E
Sbjct: 210 VKDTVETFDAVVASEVVEHVIDLETFIQCCFQVLKPDGSLFITTINKTQLSYALGIVFSE 269

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE+L  IL+   + V+ + G +YNP +G W  S++ S+N+ A
Sbjct: 270 QIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAA 329

Query: 341 FGTKNS 346
              K+S
Sbjct: 330 HALKSS 335


>gi|431838128|gb|ELK00060.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Pteropus alecto]
          Length = 460

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 102/264 (38%), Positives = 158/264 (59%), Gaps = 3/264 (1%)

Query: 84  INTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRS 143
           +NT +++         ++ +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR 
Sbjct: 169 LNTMKSYRYPWTRLYSTSRTTVDSSEVKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRD 228

Query: 144 TLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD 203
            L +    +    +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V+ NIK A+ H  
Sbjct: 229 NLLKTV-ANHQPGKPLSGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDANIKTAQRHKS 287

Query: 204 LDPETST-IEYCCTTAEKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
            DP     IEY   + E++VEE  + FDAVIASEV+EHV D   F +    +    G+  
Sbjct: 288 FDPVLDKRIEYRACSLEEIVEESTETFDAVIASEVVEHVIDLETFIQCCCQVLKPGGSLF 347

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           I+TIN++  +Y   I+ +E I   +PKGTH W  F++PE+L  I++   + V+ + G +Y
Sbjct: 348 ITTINKTQLSYVLGIVFSEQIAGIVPKGTHTWEKFVSPEKLESIMESNGLSVQTVVGMLY 407

Query: 322 NPLTGRWSLSDDISVNFIAFGTKN 345
           NP +G W  S++ S+N+ A   K 
Sbjct: 408 NPFSGHWHWSENTSLNYAAHAVKQ 431


>gi|440900229|gb|ELR51414.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Bos
           grunniens mutus]
          Length = 370

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 101/246 (41%), Positives = 152/246 (61%), Gaps = 3/246 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L R         +P  G+
Sbjct: 91  TTVDRNEVKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLRTVATHQ-PGKPLSGM 149

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + E++
Sbjct: 150 KILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLDKRIEYRTCSLEEI 209

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           V++    FDAV+ASEV+EHV D   F +    +   +G+  I+TIN++  +YA  I+ +E
Sbjct: 210 VKDTVETFDAVVASEVVEHVIDLETFIQCCFQVLKPDGSLFITTINKTQLSYALGIVFSE 269

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE+L  IL+   + V+ + G +YNP +G W  S++ S+N+ A
Sbjct: 270 QIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAA 329

Query: 341 FGTKNS 346
              K+S
Sbjct: 330 HALKSS 335


>gi|40225657|gb|AAH15634.2| COQ3 protein [Homo sapiens]
          Length = 365

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 151/248 (60%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L      +    +P 
Sbjct: 83  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLETI-PNHQPGKPL 141

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 142 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 201

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 202 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 261

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 262 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 321

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 322 YAAHAVKS 329


>gi|74151345|dbj|BAE38796.1| unnamed protein product [Mus musculus]
          Length = 311

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A TWWD  G + PLH++N  R+ FIR  L +      +  +P  G+ I+DVG
Sbjct: 38  EVKNFQALAHTWWDEYGKFAPLHSMNDLRVPFIRDNLLKT-SASHHPGKPLSGMKILDVG 96

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y  C+  E + E   
Sbjct: 97  CGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYKVCSLEEAVDESAE 156

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV+    F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 157 CFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 216

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  S++ S+N+ A   ++
Sbjct: 217 PKGTHTWEKFVSPEKLESILEPNGLSVETVAGLVYNPFSGYWHWSENTSLNYAAHAVRS 275


>gi|51980294|gb|AAH81811.1| Coq3 protein [Rattus norvegicus]
          Length = 343

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 5/251 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCR-HFRKDPYS 155
           K +S   ++   E+  F A+A +WWD +G + PLH++N  R+ FIR  L +     DP  
Sbjct: 82  KLYSTSQTVDSKEVKTFQALAHSWWDEQGKFAPLHSMNDLRVPFIRDNLLKTSTNHDP-- 139

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY- 213
            +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y 
Sbjct: 140 GKPLSGMKILDVGCGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYR 199

Query: 214 CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
            C+  E L E    FDAV+ASEV+EHV +   F +    +    G+  I+T+N++  +Y 
Sbjct: 200 VCSLEETLNENAECFDAVVASEVVEHVNNLEMFIQCCYQVLKPGGSLFITTVNKTQLSYV 259

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  +++
Sbjct: 260 LGIVFSEQIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVETVAGMVYNPFSGYWHWTEN 319

Query: 334 ISVNFIAFGTK 344
            S+N+ A   +
Sbjct: 320 TSLNYAAHAVR 330


>gi|26330600|dbj|BAC29030.1| unnamed protein product [Mus musculus]
          Length = 311

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A TWWD  G + PLH++N  R+ FIR  L +      +  +P  G+ I+DVG
Sbjct: 38  EVKNFQALAHTWWDEYGKFAPLHSMNDLRVPFIRDNLLK-TSASHHPGKPLSGMKILDVG 96

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y  C+  E + E   
Sbjct: 97  CGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYKVCSLEEAVDESAE 156

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV+    F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 157 CFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 216

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  S++ S+N+ A   ++
Sbjct: 217 PKGTHTWEKFVSPEKLESILEPNGLSVETVAGLVYNPFSGYWHWSENTSLNYAAHAVRS 275


>gi|71051329|gb|AAH98666.1| Coq3 protein [Rattus norvegicus]
          Length = 341

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 5/251 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCR-HFRKDPYS 155
           K +S   ++   E+  F A+A +WWD +G + PLH++N  R+ FIR  L +     DP  
Sbjct: 80  KLYSTSQTVDSKEVKTFQALAHSWWDEQGKFAPLHSMNDLRVPFIRDNLLKTSTNHDP-- 137

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY- 213
            +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y 
Sbjct: 138 GKPLSGMKILDVGCGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYR 197

Query: 214 CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
            C+  E L E    FDAV+ASEV+EHV +   F +    +    G+  I+T+N++  +Y 
Sbjct: 198 VCSLEETLNENAECFDAVVASEVVEHVNNLEMFIQCCYQVLKPGGSLFITTVNKTQLSYV 257

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  +++
Sbjct: 258 LGIVFSEQIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVETVAGMVYNPFSGYWHWTEN 317

Query: 334 ISVNFIAFGTK 344
            S+N+ A   +
Sbjct: 318 TSLNYAAHAVR 328


>gi|297291400|ref|XP_002808440.1| PREDICTED: LOW QUALITY PROTEIN: hexaprenyldihydroxybenzoate
           methyltransferase, mitochondrial-like [Macaca mulatta]
          Length = 369

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 152/249 (61%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGIYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPSGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIAAIVPKGTHTWEKFVSPETLESILESNGLLVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKNS 346
           + A   K+ 
Sbjct: 326 YAAHAVKSG 334


>gi|57015268|sp|Q63159.2|COQ3_RAT RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-9 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; Flags: Precursor
 gi|117558440|gb|AAI26095.1| Coq3 protein [Rattus norvegicus]
 gi|149045525|gb|EDL98525.1| coenzyme Q3 homolog, methyltransferase (yeast) [Rattus norvegicus]
          Length = 345

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 5/251 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCR-HFRKDPYS 155
           K +S   ++   E+  F A+A +WWD +G + PLH++N  R+ FIR  L +     DP  
Sbjct: 84  KLYSTSQTVDSKEVKTFQALAHSWWDEQGKFAPLHSMNDLRVPFIRDNLLKTSTNHDP-- 141

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY- 213
            +P  G+ I+DVGCGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y 
Sbjct: 142 GKPLSGMKILDVGCGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYR 201

Query: 214 CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
            C+  E L E    FDAV+ASEV+EHV +   F +    +    G+  I+T+N++  +Y 
Sbjct: 202 VCSLEETLNENAECFDAVVASEVVEHVNNLEMFIQCCYQVLKPGGSLFITTVNKTQLSYV 261

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ +E I   +PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  +++
Sbjct: 262 LGIVFSEQIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVETVAGMVYNPFSGYWHWTEN 321

Query: 334 ISVNFIAFGTK 344
            S+N+ A   +
Sbjct: 322 TSLNYAAHAVR 332


>gi|38511996|gb|AAH60960.1| Coenzyme Q3 homolog, methyltransferase (yeast) [Mus musculus]
          Length = 370

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A TWWD  G + PLH++N  R+ FIR  L +      +  +P  G+ I+DVG
Sbjct: 97  EVKNFQALAHTWWDEYGKFAPLHSMNDLRVPFIRDNLLK-TSASHHPGKPLSGMKILDVG 155

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y  C+  E + E   
Sbjct: 156 CGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYKVCSLEEAVDESAE 215

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV+    F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 216 CFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 275

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  S++ S+N+ A   ++
Sbjct: 276 PKGTHTWEKFVSPEKLESILEPYGLSVETVAGLVYNPFSGYWHWSENTSLNYAAHAVRS 334


>gi|27369992|ref|NP_766275.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Mus
           musculus]
 gi|57012693|sp|Q8BMS4.1|COQ3_MOUSE RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-9 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; Flags: Precursor
 gi|26324618|dbj|BAC26063.1| unnamed protein product [Mus musculus]
 gi|74215212|dbj|BAE41830.1| unnamed protein product [Mus musculus]
 gi|148673601|gb|EDL05548.1| coenzyme Q3 homolog, methyltransferase (yeast) [Mus musculus]
          Length = 370

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A TWWD  G + PLH++N  R+ FIR  L +      +  +P  G+ I+DVG
Sbjct: 97  EVKNFQALAHTWWDEYGKFAPLHSMNDLRVPFIRDNLLK-TSASHHPGKPLSGMKILDVG 155

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y  C+  E + E   
Sbjct: 156 CGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYKVCSLEEAVDESAE 215

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV+    F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 216 CFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 275

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  S++ S+N+ A   ++
Sbjct: 276 PKGTHTWEKFVSPEKLESILEPNGLSVETVAGLVYNPFSGYWHWSENTSLNYAAHAVRS 334


>gi|12052971|emb|CAB66660.1| hypothetical protein [Homo sapiens]
          Length = 369

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V+++IK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDEDIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S+N
Sbjct: 266 FSEQIASIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|190570641|ref|YP_001974999.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Culex quinquefasciatus Pel]
 gi|213019108|ref|ZP_03334915.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190356913|emb|CAQ54291.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212995217|gb|EEB55858.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 388

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 16/310 (5%)

Query: 33  SNSISKMAARHLRILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQ 92
           S  I+K+A  H      C GA      F+ S LA++ +          S      E   +
Sbjct: 91  SVEIAKLAREHGNANILCLGA-----GFTASGLAKDIVKQFL--ETEFSKESRHKERLDK 143

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           L+N  K     +    E++KF+ IA  WW+  G +KPLH +NP R+++I   +    + D
Sbjct: 144 LSNISKKKTTKTYNEDEISKFAKIAGEWWNENGKFKPLHMMNPVRVSYIVEKIKELKKCD 203

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                  + L+++DVGCGGGILSE +AR+G +V GID  E+NIK+A+LHA        IE
Sbjct: 204 ------LKELSLLDVGCGGGILSESMARIGISVAGIDVCEENIKVAQLHAK--KVGLNIE 255

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  T+ E+L    +K+D V+  EV+EHV +   F K    L   EG   ISTINR+++++
Sbjct: 256 YTHTSIEEL-SNDKKYDVVLLMEVVEHVDNLEFFMKKAIELLKPEGLIFISTINRTIKSF 314

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+ AE+IL+WLPKGTH W+ FL P E+   L+  ++ ++ MAG  YN +   W+L+ 
Sbjct: 315 CLAIVGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVILQNMAGMEYNVIKREWNLTK 374

Query: 333 DISVNFIAFG 342
            + VN+I  G
Sbjct: 375 GVDVNYILCG 384


>gi|74209300|dbj|BAE25011.1| unnamed protein product [Mus musculus]
          Length = 311

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 147/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A TWWD  G + PLH++N  R+ FIR  L +      +  +P  G+ I+DVG
Sbjct: 38  EVKNFQALAHTWWDEYGKFAPLHSMNDLRVPFIRDNLLK-TSASHHPGKPLSGMKILDVG 96

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V +NIKIA+ H   DP     I+Y  C+  E + E   
Sbjct: 97  CGGGLLTEPLGRLGASVVGIDPVAENIKIAQHHKSFDPVLDKRIQYKVCSLEEAVDESAE 156

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV+    F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 157 CFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 216

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V+ +AG VYNP +G W  S++ S+N+ A   ++
Sbjct: 217 PKGTHTWEKFVSPEKLESILEPNGLSVETVAGLVYNPFSGCWHWSENTSLNYAAHAVRS 275


>gi|332218543|ref|XP_003258415.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial [Nomascus leucogenys]
          Length = 369

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/248 (40%), Positives = 152/248 (61%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 FGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE L  IL+   + V+ + G +YNP +G W  S++ S++
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLH 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|296445292|ref|ZP_06887251.1| ubiquinone biosynthesis O-methyltransferase [Methylosinus
           trichosporium OB3b]
 gi|296257247|gb|EFH04315.1| ubiquinone biosynthesis O-methyltransferase [Methylosinus
           trichosporium OB3b]
          Length = 257

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 102/258 (39%), Positives = 156/258 (60%), Gaps = 9/258 (3%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR--- 150
           + ++ HS  SS+  A++A+F  + + WWDA G    LH +NP R+ +I    CR  R   
Sbjct: 4   DQSRPHS--SSVDPADVARFDRLGELWWDAAGKMGILHEINPIRVDYICDHACRRLRIDG 61

Query: 151 --KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET 208
             +D + A+P + L IVD+GCGGGIL+E LA +GA +TGID    NI +A  HA+     
Sbjct: 62  ERRDRHGAQPLDALRIVDIGCGGGILTEALAELGAQMTGIDPAPNNIAVASRHAER--SG 119

Query: 209 STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
            +I+Y  TTAE L  E  +FD V+A EV+EHV    +F  +L+ +    G   ++TI+R+
Sbjct: 120 LSIDYRNTTAEALAAEGARFDIVVAMEVLEHVEGQKDFVATLARMVEPGGLLFLATIDRT 179

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
           +++YA AI+ AE++L W+P+GTH    F+ P+EL   L+RA +   + +G  + PLT RW
Sbjct: 180 LKSYALAIVGAEYVLGWVPRGTHDHDKFVRPDELSAWLRRAGLREIDRSGMSFQPLTRRW 239

Query: 329 SLSDDISVNFIAFGTKNS 346
             S D  VN++    K++
Sbjct: 240 RRSHDTDVNYMMAAAKDA 257


>gi|383770578|ref|YP_005449641.1| hypothetical protein S23_23160 [Bradyrhizobium sp. S23321]
 gi|381358699|dbj|BAL75529.1| hypothetical protein S23_23160 [Bradyrhizobium sp. S23321]
          Length = 258

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 150/249 (60%), Gaps = 4/249 (1%)

Query: 92  QLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
            L  + K     S+   E+A+F A+A+ WW+ +G  K +H  N  R+A +R+ L     +
Sbjct: 1   MLRKDMKTGLAPSVDPDEIARFEALAEDWWNPDGRMKLVHGFNAARVAHLRNRLPALMLR 60

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST- 210
           DP   RP +GL ++DVGCGGG+++EP+AR+GA   GIDA E+N+++A +HAD   +T   
Sbjct: 61  DPRRERPLDGLTLLDVGCGGGLVTEPMARLGALALGIDAAERNVRVATVHAD---QTGLP 117

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           + Y     E++V E+R+FD V++ EV+EHVAD   F  + ++L    G  VI T+NR++ 
Sbjct: 118 VVYRQAVPEEMVAERRQFDIVLSLEVVEHVADTDRFLAATASLVAPGGLLVIGTLNRTLV 177

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L WLP+GTH W  F+ P+E+   L      V E  G    P+T RW  
Sbjct: 178 SFVKAIVGAEYVLGWLPRGTHDWRRFMRPDEIAGTLAPLGFSVIETCGLELAPITMRWHT 237

Query: 331 SDDISVNFI 339
           +   + N++
Sbjct: 238 TRSCNTNYL 246


>gi|291396671|ref|XP_002714915.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase
           [Oryctolagus cuniculus]
          Length = 395

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 151/248 (60%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    D    +P 
Sbjct: 113 TSQTTIDSSEVKTFQALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKAV-DDHQPGKPL 171

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTT 217
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A  H   DP     +EY  C+ 
Sbjct: 172 SGMKILDVGCGGGLLAEPLGRLGASVIGIDPVDENIKTAHHHKSFDPVLDKRLEYRACSL 231

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
            E   E    FDAVIASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 232 EEIAEETIETFDAVIASEVVEHVIDLETFIQCCCQVLKPGGSLFITTINKTQLSYALGIV 291

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++PE+L  IL+   + ++ +AG +YNP +G W  S++ S+N
Sbjct: 292 FSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSLQTVAGMLYNPFSGYWHWSENTSLN 351

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 352 YAAHAVKS 359


>gi|198427917|ref|XP_002128902.1| PREDICTED: similar to Hexaprenyldihydroxybenzoate
           methyltransferase, mitochondrial precursor
           (Dihydroxyhexaprenylbenzoate methyltransferase)
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) (DHHB-MTase) (DHHB-MT)...
           [Ciona intestinalis]
          Length = 300

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 148/237 (62%), Gaps = 1/237 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E  KFS +A+ WWD  G  K LH++N  R+ FIR  L      +PY+++P +G+ I++VG
Sbjct: 55  EAEKFSKLAENWWDENGAMKALHSMNRVRVPFIRDGLISMGCGEPYTSKPLQGIKILEVG 114

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV-EEQRK 227
           CG G+L EPLAR+GA+V GIDA +  +++A++H D + E S ++Y     E +V     +
Sbjct: 115 CGAGVLCEPLARLGASVLGIDASDNVLEVAKIHRDGNTELSDLQYIDADLEDIVGAGTLR 174

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           F AV+ASEV+EHV D  +F  +  +L +  G+  +STINR+  +Y  A++ AE +L  +P
Sbjct: 175 FHAVVASEVVEHVEDKTKFINNCCSLLMPNGSLFLSTINRTQVSYLLAVLMAEEVLGVVP 234

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
            GTH W  F+T +E+   L + + +++++ G  YNPL  +W+   + SVN+I    K
Sbjct: 235 PGTHDWEMFVTTDEIKSYLNQGNCEIQKIVGMNYNPLNNKWTKCQNTSVNYILHAVK 291


>gi|25990404|gb|AAN76515.1|AF351615_1 UG0215E05 [Homo sapiens]
          Length = 369

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 151/248 (60%), Gaps = 3/248 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G Y PLH++N  R+ FIR  L      +    +P 
Sbjct: 87  TSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLETI-PNHQPGKPL 145

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 146 LGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSL 205

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE  + FDAV+ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+
Sbjct: 206 EEIVEETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIV 265

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            +E I   +PKGTH W  F++ E L  IL+   + V+ + G +YNP +G W  S+D S+N
Sbjct: 266 FSEQIAGIVPKGTHTWEKFVSLEPLESILESNGLSVQTVVGMLYNPFSGYWHWSEDTSLN 325

Query: 338 FIAFGTKN 345
           + A   K+
Sbjct: 326 YAAHAVKS 333


>gi|73667027|ref|YP_303043.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia canis str.
           Jake]
 gi|72394168|gb|AAZ68445.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia canis str.
           Jake]
          Length = 239

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 145/236 (61%), Gaps = 6/236 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   EL KFS IA  WWD  GP+K LH+++P R+ +I   + +           F+ L+
Sbjct: 4   TVNQDELLKFSKIASQWWDENGPFKALHSMHPLRMQYIVDYINK-----VTPGVDFKKLS 58

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGG+LSE +AR+G  V GIDA E+++ IA++HA L+     ++YCC   + LV 
Sbjct: 59  VLDVGCGGGLLSESMARLGMKVFGIDASEESVNIAKVHA-LNRNLCNLDYCCVNVDSLVS 117

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
            + K+D +   EV+EHV + + F  S+S +    G   +ST+NR+M++   AI+ AE++ 
Sbjct: 118 TKEKYDIITVMEVVEHVDNLSVFINSISNILNDNGIIFLSTLNRTMKSLLYAIVYAEYVF 177

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
             +P+ THQW+ F+ P E+  +     I +KE+ G  +N +   W LSDDISVN+I
Sbjct: 178 KLVPRHTHQWNKFVKPSEIANLFLLNDISIKEIKGINFNIMKKDWVLSDDISVNYI 233


>gi|350570502|ref|ZP_08938855.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria wadsworthii
           9715]
 gi|349796127|gb|EGZ49917.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria wadsworthii
           9715]
          Length = 291

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/283 (39%), Positives = 165/283 (58%), Gaps = 16/283 (5%)

Query: 60  FSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNKKHSAPS-SLKHAELAKFSAIAD 118
           F ++ L     AST++   ++   I    ++    N  +H+ P  ++  AE+ KFS +A 
Sbjct: 16  FKNACLKTFRQASTSLHPRAIWVKIPPIFHYPNEQNMDQHTEPERNVDDAEIDKFSRLAH 75

Query: 119 TWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPL 178
            WWD  G +KPLH +NP RL +I     RH +          G  ++DVGCGGGILSE +
Sbjct: 76  KWWDTAGEFKPLHDINPLRLGYID----RHGQ--------LAGKTVLDVGCGGGILSESM 123

Query: 179 ARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RKFDAVIASEV 236
           A++GA  VTGID  EK++KIA LHA L+     ++Y C + E L  E    +D V   E+
Sbjct: 124 AKLGAEAVTGIDMAEKSLKIAELHA-LESGVGNLKYRCISVEDLAAEAPHGYDIVTCMEM 182

Query: 237 IEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSF 296
           +EHV DP    ++ + L   +G    STINR+ ++Y  AI+ AE+IL+ +PKGTH W  F
Sbjct: 183 MEHVPDPDSIIRACAKLVKPDGMVFFSTINRNPKSYVHAILGAEYILNLVPKGTHDWKKF 242

Query: 297 LTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +TP EL  + ++A +DV +  G  YNPLT  +SL+D+  VN++
Sbjct: 243 ITPAELARMCRQAGLDVVDTKGMGYNPLTKVYSLNDNTDVNYM 285


>gi|345328781|ref|XP_001506954.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Ornithorhynchus anatinus]
          Length = 358

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 102/239 (42%), Positives = 144/239 (60%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF  +A  WWD +G Y PLH+LN  R+ FIR  L +      +   P  G+ I+DVG
Sbjct: 88  EMKKFQILAHKWWDEQGAYSPLHSLNDLRVPFIRDNLLK-TTASHHLGSPLSGMKILDVG 146

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEY-CCTTAEKLVEEQR 226
           CGGG+LSEPL R+GA VTGID +E N+K A+ H   DP     I+Y  C+  E   E   
Sbjct: 147 CGGGLLSEPLGRLGALVTGIDPLEDNVKTAQQHKRFDPALDQKIQYRACSLEEIAEESAE 206

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV D   F K    +    G+  I+TIN++  +Y   II AE I   +
Sbjct: 207 AFDAVVASEVVEHVIDLETFIKCCHRVLKPRGSLFITTINKTPLSYVLGIIFAEQIAGIV 266

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PEEL  +L+   + V+ + G ++NPL+G W+ +++ S+N+ A   K+
Sbjct: 267 PKGTHDWEKFVSPEELESLLEANGLMVQRVRGMLFNPLSGYWNWTENTSLNYAAHAVKS 325


>gi|157826024|ref|YP_001493744.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia akari str.
           Hartford]
 gi|166201215|sp|A8GPB1.1|UBIG_RICAH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|157799982|gb|ABV75236.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia akari str.
           Hartford]
          Length = 251

 Score =  203 bits (517), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 104/245 (42%), Positives = 144/245 (58%), Gaps = 10/245 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   ELAKF  I+  WW+ +G +  LH +NP RL +I   +  H+       R    L
Sbjct: 2   SSIDKKELAKFEKISHNWWNKDGEFGLLHRINPIRLEYIIEKITAHYN------RHLSKL 55

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A        I Y  +T E+L 
Sbjct: 56  EILDVGCGGGLIAMPLAAQGFNVTAIDALQSNIETASTYAK--ENNVKINYLQSTIEEL- 112

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AYA  II AE+I
Sbjct: 113 ESDKLYDVVICIEVIEHVGNVQQFILNLVKHIKPNGMAIISTINRTKKAYALGIIVAEYI 172

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAF 341
           L W+PK TH ++ FL P E+  +L    I++KE+ G VY+P    W LSDDI VN F+  
Sbjct: 173 LGWVPKNTHDYTKFLKPSEIYEMLTDTDIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCL 232

Query: 342 GTKNS 346
           G+KN+
Sbjct: 233 GSKNA 237


>gi|58584455|ref|YP_198028.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
 gi|58418771|gb|AAW70786.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Wolbachia endosymbiont strain TRS of Brugia malayi]
          Length = 402

 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 146/238 (61%), Gaps = 9/238 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF+ +   WWD  G +KPLH +NP R+++I   +    + D       + L+++DVG
Sbjct: 174 EVSKFAKMVGEWWDENGKFKPLHMMNPVRVSYIIEKIKELKKCD------LKKLSLLDVG 227

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+G  V GID  E+NIK+A+ HA        IEY  T+ E+L   Q K+
Sbjct: 228 CGGGILSESIARVGINVLGIDVCEENIKVAQSHAK--KVGLNIEYTHTSIEELSNNQ-KY 284

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV +   F K    L   EG   ISTINR+ +++  AII AE+IL+WLPK
Sbjct: 285 DVVLLMEVVEHVDNLELFIKKAIELLKPEGLIFISTINRTFKSFFLAIIGAEYILNWLPK 344

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           GTH W+ FL P E+   L+  ++ +++MAG  YN +   W+L+  + VN+I  G  NS
Sbjct: 345 GTHNWNKFLKPSEIANHLREGNVTLQDMAGMEYNIIKSEWNLTKGVDVNYILCGVMNS 402


>gi|348532065|ref|XP_003453527.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Oreochromis niloticus]
          Length = 338

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 151/256 (58%), Gaps = 6/256 (2%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           +N  + ++ S++   EL KF ++A+ WWD +G +  LHA+N  R+ FIR  L    R   
Sbjct: 63  HNGVRSASHSTVDPDELRKFQSLANKWWDEQGEFAALHAMNDLRVPFIRDNLLNVHRAR- 121

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE-TSTIE 212
           +  +P  GL I+DVGCGGG+L+EPL R+GA V GID VE +I  A+LH+  DP+    + 
Sbjct: 122 HPGKPLAGLKILDVGCGGGLLTEPLGRLGAKVLGIDPVENSIGTAQLHSSFDPDLCERVS 181

Query: 213 YCCTTAEKLV----EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
           Y   T E+L     E    FDAV+ASEV+EH+AD   F    S +    G+  I+TIN++
Sbjct: 182 YQVCTLEELSGGEDEGAGHFDAVVASEVVEHLADLETFAFCCSQVLKPGGSLFITTINKT 241

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
             +Y   I+ AE +L  +P GTH W  F++P +L  +L+     V+ + G +YNPL+G W
Sbjct: 242 NLSYVLGIVVAEQLLRIVPNGTHDWEKFVSPVDLECLLESHGFSVQSVKGMLYNPLSGAW 301

Query: 329 SLSDDISVNFIAFGTK 344
           S +D  ++N+     K
Sbjct: 302 SWTDSTAINYALHAVK 317


>gi|373450345|ref|ZP_09542356.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia pipientis
           wAlbB]
 gi|371932454|emb|CCE77358.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia pipientis
           wAlbB]
          Length = 388

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 172/310 (55%), Gaps = 16/310 (5%)

Query: 33  SNSISKMAARHLRILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQ 92
           S  I+K+A  H      C GA      F+ S LA++ +          S      E   +
Sbjct: 91  SVEIAKLAREHGNANILCLGA-----GFTASGLAKDIVKQFL--ETEFSKESRHKERLDK 143

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           L+N  K     +    E++KF+ IA  WWD  G +KPLH +NP R+++I   + +  +K 
Sbjct: 144 LSNINKKKTTKTYNEDEISKFAKIAGEWWDENGKFKPLHMMNPVRVSYIVEKI-KELKK- 201

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                  + L+++DVGCGGGILSE +AR+G +V GID  E+NIK+A+ HA        IE
Sbjct: 202 ----CDLKELSLLDVGCGGGILSESMARVGISVAGIDVCEENIKVAQSHAK--KVGLNIE 255

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  T+ E+L    +K+D V+  EV+EHV +   F K    L   EG   ISTINR+++++
Sbjct: 256 YTHTSIEEL-SNDKKYDVVLLMEVVEHVDNLEFFMKKAIELLKPEGLIFISTINRTIKSF 314

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+ AE+IL+WLPKGTH W+ FL P E+   L+  ++ +++M G  YN +   W+L  
Sbjct: 315 CLAIVGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQDMTGMEYNVIKREWNLIK 374

Query: 333 DISVNFIAFG 342
            + VN+I  G
Sbjct: 375 GVDVNYILCG 384


>gi|344340669|ref|ZP_08771593.1| 3-demethylubiquinone-9 3-methyltransferase [Thiocapsa marina 5811]
 gi|343799350|gb|EGV17300.1| 3-demethylubiquinone-9 3-methyltransferase [Thiocapsa marina 5811]
          Length = 248

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 144/241 (59%), Gaps = 3/241 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H +  ++   E+A F  +A  WWD+EGP+ PLH LN  R+ +IR  L   F +DP + RP
Sbjct: 5   HLSAPTIDPEEVAYFERLAHRWWDSEGPFWPLHRLNAFRVDYIRRHLAAAFGRDPRAERP 64

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL ++D+GCGGGILSE +AR+GA+VTG++  EKN+++A++HA        I+Y   TA
Sbjct: 65  FEGLKVLDIGCGGGILSESIARLGASVTGVEITEKNVRVAQIHAQWS--GLEIDYRLGTA 122

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E LV    +FDAV+  EVIEHV    EF      L    G   I++INR++ A   AI  
Sbjct: 123 EDLVRAGEQFDAVLNMEVIEHVEHLPEFLADCGRLVRPGGVMFIASINRTIAALIVAIFG 182

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLPKGTH +   + P E+   L      VK+  G   NP   R+ ++  + VN+
Sbjct: 183 AEYVLRWLPKGTHHYRKLVPPGEVEAFLG-DDFQVKDRTGVRVNPFNRRFGVTRWMGVNY 241

Query: 339 I 339
           +
Sbjct: 242 M 242


>gi|330813120|ref|YP_004357359.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Pelagibacter
           sp. IMCC9063]
 gi|327486215|gb|AEA80620.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Pelagibacter
           sp. IMCC9063]
          Length = 242

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 139/236 (58%), Gaps = 4/236 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD  G + PLH  NP R  ++   +  HF         F  L ++D+G
Sbjct: 10  EVKKFSNMASEWWDPNGKFSPLHKFNPVRQEYLIDRISSHFSLSLDKNFSFSNLTLLDIG 69

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+L EP AR+GA VTGIDA + NI++A++HA        I+Y     E++  + +KF
Sbjct: 70  CGGGLLCEPFARLGAQVTGIDASKNNIEVAKIHAQ--KTNLQIQYLNKLPEEI--KNKKF 125

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D ++  EVIEHV +   F +S S L    G    +TINR+ ++Y  AI+ AE++L WLP 
Sbjct: 126 DVILCMEVIEHVDNVNFFVESCSKLLNKNGIIFFATINRNPKSYLFAIVGAEYVLRWLPV 185

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTH W  F+ P+E++  +    +  +E  G  +NP+  +WSLS+D SVN++   TK
Sbjct: 186 GTHDWKKFVKPQEMINYVSTQQLIHQETKGVTFNPILNKWSLSNDTSVNYMTCFTK 241


>gi|410447855|ref|ZP_11301947.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86E]
 gi|409979435|gb|EKO36197.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86E]
          Length = 233

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 146/245 (59%), Gaps = 15/245 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   E+ KF+ IA+ WWD  G +KPLH +NP R  +I   +              EGL
Sbjct: 3   QNIDQHEVNKFAEIAENWWDPTGDFKPLHVINPLRANYINQKIS------------VEGL 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGG+L+E L   GA VT ID  E NI +A+LHA+       I+Y   TAE+L 
Sbjct: 51  KVLDVGCGGGLLAEALDAKGANVTAIDVTEANIGVAQLHAE--KMKLEIDYRLITAEELA 108

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   EVIEHV DP +  K+ S L    G   +ST+NR+ R++ TAI+ AE+
Sbjct: 109 EQESESFDVVSCLEVIEHVPDPGQLIKACSDLLKPNGQMFLSTLNRNPRSFVTAIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           I + LPKGTH+WS F+ P EL   ++ A+I + E  G  YNP+    +L++D+ VN++  
Sbjct: 169 IFNVLPKGTHEWSKFIKPSELERYMRNANIKLIESKGMFYNPIFHTANLNNDLGVNYMMH 228

Query: 342 GTKNS 346
           G+KN+
Sbjct: 229 GSKNA 233


>gi|344264082|ref|XP_003404123.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Loxodonta africana]
          Length = 448

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 146/239 (61%), Gaps = 3/239 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F  +A  WWD +G Y PLH++N  R+ FIR  L +    D    +P  G+ I+DVG
Sbjct: 175 EVKTFRTLAHRWWDEQGTYAPLHSMNDLRVPFIRDNLLKTV-TDHQPGKPLSGMKILDVG 233

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID V++NIK A+ H   DP  +  IEY  C+  E + E   
Sbjct: 234 CGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLAKRIEYRACSLEEIVEETIE 293

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDA++ASEV+EHV D   F +    +    G+  I+TIN++  +YA  I+ AE I   +
Sbjct: 294 TFDAIVASEVVEHVLDLETFIQCCCRVLKPGGSLFITTINKTQLSYALGIVFAEQIAGLV 353

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH W  F++PE+L  IL+   + V  +AG +YNP +G W  S++ S+N+ A   K+
Sbjct: 354 PKGTHTWEKFVSPEKLESILESNGLSVLTVAGMLYNPFSGYWHWSENTSLNYAAHAAKS 412


>gi|323136533|ref|ZP_08071615.1| ubiquinone biosynthesis O-methyltransferase [Methylocystis sp. ATCC
           49242]
 gi|322398607|gb|EFY01127.1| ubiquinone biosynthesis O-methyltransferase [Methylocystis sp. ATCC
           49242]
          Length = 257

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/253 (42%), Positives = 146/253 (57%), Gaps = 9/253 (3%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS--- 155
           HSA  S+   ++A+F+ + + WWD  G    LH +NP R+ +IR  + R    DP +   
Sbjct: 9   HSA--SVNPEDVARFNRLGELWWDKSGKMGILHDINPIRVTYIRDHIRRLLLNDPKALNE 66

Query: 156 --ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
              RP EG+ I D+GCGGGILSE LA +GA VTGID    NI +A  HA+       I+Y
Sbjct: 67  SGERPLEGVRIADIGCGGGILSESLAELGARVTGIDPAPNNIAVASRHAE--KSGLDIDY 124

Query: 214 CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
              TAE L E   +FDAV A EVIEHV  PA+F   L  L    G   ++TI+R+M++Y 
Sbjct: 125 RNITAEALAETGEQFDAVAALEVIEHVEGPADFIGMLGRLVRPGGLLFLATIDRTMKSYV 184

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE++L W+PKGTH  + F+ P+EL   L+RA +   + AG  + PLT  W  S D
Sbjct: 185 FAILGAEYVLGWVPKGTHDHNKFIRPDELSAWLRRAGMREIDRAGMSFQPLTRSWRKSHD 244

Query: 334 ISVNFIAFGTKNS 346
             VN++    K  
Sbjct: 245 TDVNYLMAAKKQG 257


>gi|353327743|ref|ZP_08970070.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           wVitB of Nasonia vitripennis]
          Length = 388

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/310 (36%), Positives = 173/310 (55%), Gaps = 16/310 (5%)

Query: 33  SNSISKMAARHLRILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQ 92
           S  I+K+A  H      C GA      F+ S LA++ +          S      E   +
Sbjct: 91  SVEIAKLAREHGNANILCLGA-----GFTASGLAKDIVKQFL--ETEFSKESRHKERLDK 143

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           L+N  K     +    E++KF+ IA  WW+  G +KPLH +NP R+++I   + +  +K 
Sbjct: 144 LSNISKKKTTKTYNEDEISKFAKIAGEWWNENGKFKPLHMMNPVRVSYIVEKI-KELKK- 201

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                  + L+++DVGCGGGILSE +AR+G +V GID  E+NIK+A+ HA        IE
Sbjct: 202 ----CDLKELSLLDVGCGGGILSESMARIGISVAGIDVCEENIKVAQSHAK--KVGLNIE 255

Query: 213 YCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
           Y  T+ E+L    +K+D V+  EV+EHV +   F K    L   EG   ISTINR+++++
Sbjct: 256 YTHTSIEEL-SNDKKYDVVLLMEVVEHVDNLEFFMKKAIELLKPEGLIFISTINRTIKSF 314

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+ AE+IL+WLPKGTH W+ FL P E+   L+  ++ +++M G  YN +   W+L+ 
Sbjct: 315 CLAIVGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQDMTGMEYNVIKREWNLTK 374

Query: 333 DISVNFIAFG 342
            + VN+I  G
Sbjct: 375 GVDVNYILCG 384


>gi|156545161|ref|XP_001603088.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Nasonia vitripennis]
          Length = 289

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 152/244 (62%), Gaps = 2/244 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   ++   S  +D WWD  G    LH +N  R+ F+R  L     K+   +RP EG+
Sbjct: 37  STVDFQDVIHHSKHSDNWWDPHGELGALHTMNSLRVKFVRDGLANVGFKETNPSRPLEGI 96

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE-TSTIEYCCTTAEKL 221
            ++DVGCGGGILSEPLAR+GA VTG+DA ++ I IAR HA LD + +S + Y  T  E  
Sbjct: 97  KLLDVGCGGGILSEPLARIGANVTGLDASKELISIARQHALLDKDLSSNLNYVHTPIEDY 156

Query: 222 VEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +EQ+ KFDAV+ASE++EHV D   F K  S +   +G+  I+T+N+++ ++   ++ AE
Sbjct: 157 SQEQKEKFDAVVASEILEHVIDQELFLKCCSEVLKPKGSIFITTLNKNLISWLGGVVFAE 216

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L  LPKGTH W+ F+TP++   +L++ +   K + G +YNP T +WS +   ++N+  
Sbjct: 217 YVLGLLPKGTHDWNKFITPDDTKRLLEKCNCKTKLVHGMLYNPATKQWSWTTSTAINYAL 276

Query: 341 FGTK 344
              K
Sbjct: 277 HAVK 280


>gi|432907545|ref|XP_004077646.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Oryzias latipes]
          Length = 328

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 20/310 (6%)

Query: 45  RILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNKKHSA-PS 103
           R++ G NG    +R  S  T+ Q   A   +   SV       E   +L      SA  S
Sbjct: 8   RLVLGLNG----LRATSVGTVVQRAAAPRGLSWTSV-----CRERTQRLRVRGTRSASQS 58

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  +E+ +F  +A  WWD +G +  LHA+N  R+ F+R  L    R   +  +P  GL 
Sbjct: 59  TVDSSEVRRFRLLASKWWDEDGEFAALHAMNDLRVPFVRDNLLTVHRAR-HPGKPLAGLR 117

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEY-CCTTAEKL 221
           ++DVGCGGG+LSEPL R+GA V GID VE++I+IA+LH+  DP+    + Y  CT  E  
Sbjct: 118 VLDVGCGGGLLSEPLGRLGANVLGIDPVEESIRIAQLHSSHDPDLRDRVSYRACTLEELS 177

Query: 222 VEEQR-------KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
            E +        +FDAV+ASEV+EH+AD   F    S      G+  I+TIN++  +YA 
Sbjct: 178 GEGEGEGEPGAAQFDAVVASEVVEHLADLETFALCCSHDLKPGGSLFITTINKTKLSYAL 237

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE +L  +P+GTH W  F++PEEL  +L+     V+ + G +Y+PL+G WS +D  
Sbjct: 238 AIVVAEQLLRIVPRGTHDWEKFISPEELERLLESNGFTVQSVQGMMYSPLSGAWSWTDST 297

Query: 335 SVNFIAFGTK 344
           ++N+     K
Sbjct: 298 AINYALHAVK 307


>gi|301632871|ref|XP_002945503.1| PREDICTED: 3-demethylubiquinone-9 3-methyltransferase-like [Xenopus
           (Silurana) tropicalis]
          Length = 236

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 150/240 (62%), Gaps = 15/240 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +    LC           P  G  ++DV
Sbjct: 10  AELAKFSELAHRWWDPESEFRPLHQINPLRLEW----LC--------GLAPLGGQKVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA VTGID   K ++IA+LHA L+ +T +I+Y   +AE L  EQ  
Sbjct: 58  GCGGGILADSMARKGADVTGIDLSTKALRIAQLHA-LETQTPSIQYREISAEALAAEQPD 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   +S + L    G    STI+R+M+A+A AI+AAE++L  L
Sbjct: 117 PFDIVTCMEMLEHVPDPASVVRSCAQLVKPGGWVFFSTIHRNMKAWALAIVAAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           P+GTH+++ F+ P EL    ++A + ++   G  YNPLT R+ L  D SVN++ F T+ +
Sbjct: 177 PRGTHEYAKFIQPHELATYCRKAGLQLRHTKGLSYNPLTQRYHLGADTSVNYL-FATQRA 235


>gi|254780872|ref|YP_003065285.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040549|gb|ACT57345.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 254

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 155/247 (62%), Gaps = 3/247 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           KK+   ++     + +FS IA  WW+  G +KPLH +NP R+ +I+  + +HF+      
Sbjct: 3   KKYPNYTTKNQDAINQFSNIASEWWEPTGKFKPLHQINPVRIKYIQDKIMQHFQCKSDDT 62

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
            PF+GL I+D+GCGGG+LSEP+A+MGATVTGID   KNI IA+ HA++  +   I+Y  +
Sbjct: 63  HPFKGLRILDLGCGGGLLSEPMAQMGATVTGIDPSTKNIAIAKNHANM--KNINIDYRVS 120

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            AE++ E   KFD ++  EVIEHV +   F K+  +L +S G   ISTINR+++A   AI
Sbjct: 121 CAEEIAETDEKFDIILNMEVIEHVDNIPYFIKTCCSLLLSNGLMFISTINRNLKAMLLAI 180

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDIS 335
           I AE++L WLPKGTHQ+  F+ P E+   L    + + +  G VYN    +W LS  ++ 
Sbjct: 181 IGAEYLLQWLPKGTHQYDKFIKPTEMECFLAANKVKIIDRVGVVYNVFCNKWQLSAKNMD 240

Query: 336 VNFIAFG 342
           VN++  G
Sbjct: 241 VNYMVLG 247


>gi|165975740|ref|YP_001651333.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165875841|gb|ABY68889.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 245

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 146/243 (60%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             A    G 
Sbjct: 13  NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KANGLFGK 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +AR GATVTGID   + +++AR HA+      +I+Y  TT E  V
Sbjct: 62  KVLDVGCGGGILSEAMARAGATVTGIDMTTEPLEVARKHAE--ENGLSIDYRQTTIEDFV 119

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 120 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A++  +EM G+ +NPLT ++ L++D+S N
Sbjct: 180 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMANLRCQEMKGYHFNPLTEKFWLNNDVSCN 239

Query: 338 FIA 340
           +IA
Sbjct: 240 YIA 242


>gi|348030531|ref|YP_004873217.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Glaciecola nitratireducens FR1064]
 gi|347947874|gb|AEP31224.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Glaciecola nitratireducens FR1064]
          Length = 257

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 154/252 (61%), Gaps = 10/252 (3%)

Query: 91  SQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           S L+ N ++S  S++   E+ +F ++A++WWD  G YK     N  R+++    +C+HF 
Sbjct: 8   SHLSKNDENS--SNVSAQEIERFDSLAESWWDPNGKYKTALIFNQARISYFVPQICQHFG 65

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPE 207
           +DP      +GL I+DVG GGG++ EPLA  GATV GIDA   ++++A+ HA   DLD  
Sbjct: 66  RDPKQDDCLKGLTILDVGSGGGLVCEPLAARGATVVGIDASAMSVQVAKRHALKSDLD-- 123

Query: 208 TSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINR 267
              I+Y    + +L  + ++FD VI +EV+EHV D     K    LT  +G  +++T+NR
Sbjct: 124 ---IDYRHMLSTELANQDQQFDVVINAEVVEHVPDQKALIKECGDLTKDKGFVILATLNR 180

Query: 268 SMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGR 327
           ++++Y  AI+ AE+++ +LP GTH W+ F+TP EL  +   A +     +G  YNP + R
Sbjct: 181 TLKSYIIAILGAEYVMRYLPVGTHSWTKFVTPIELNQMADAAGLTQLSESGMAYNPFSKR 240

Query: 328 WSLSDDISVNFI 339
           W L+ ++SVN+I
Sbjct: 241 WRLTQNLSVNYI 252


>gi|88800756|ref|ZP_01116314.1| 3-demethylubiquinone-9 3-methyltransferase [Reinekea blandensis
           MED297]
 gi|88776532|gb|EAR07749.1| 3-demethylubiquinone-9 3-methyltransferase [Reinekea sp. MED297]
          Length = 235

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 145/240 (60%), Gaps = 14/240 (5%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A +++  AELAKF A+A  WWD +  +KPLH LNP R+ FI S +               
Sbjct: 2   ATTNVDPAELAKFEALASRWWDPDSEFKPLHDLNPVRMRFIDSHIN------------VA 49

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL + D+GCGGGIL+E LA+ G  VTGID  +  +K+A+LHA L+     IEY   TAE+
Sbjct: 50  GLKVADIGCGGGILTETLAKRGGQVTGIDMTDAPLKVAQLHA-LEQGLEGIEYRQMTAEQ 108

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD +   E++EHV DP+    ++  L    G    STINR+ +A+  AI+ A
Sbjct: 109 LAEEAPGQFDVITCMEMLEHVPDPSSVMSAIRTLLKPGGKAFFSTINRNPKAFLFAIVGA 168

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++++ LPKGTH++  F+ P EL    + A + V+E  G  YNPLT  + LS D+SVN++
Sbjct: 169 EYVMNLLPKGTHEYQKFIRPSELSSAAREAGLTVREFKGMTYNPLTKAFRLSSDVSVNYL 228


>gi|421596654|ref|ZP_16040429.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase, partial
           [Bradyrhizobium sp. CCGE-LA001]
 gi|404271239|gb|EJZ35144.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase, partial
           [Bradyrhizobium sp. CCGE-LA001]
          Length = 219

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 93/212 (43%), Positives = 138/212 (65%), Gaps = 5/212 (2%)

Query: 93  LNNNKKHSAP--SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           +  N   SAP  S++  AE+AKFS ++  WWD +G   PLH +NP RL +IR   CR F 
Sbjct: 3   MQQNTSVSAPPGSTVDAAEIAKFSKLSAEWWDPKGKMAPLHRINPLRLGYIRDAACRKFE 62

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
           ++  S     GL ++D+GCG G+L EPL+R+GA V G+D    NI  A+LHA       +
Sbjct: 63  RNVRSLNCLGGLRVLDIGCGAGLLCEPLSRLGAQVIGVDPSASNIAAAKLHA--GKSHLS 120

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           I+Y CTT E+ ++ + +FD V+A EV+EHV D   F K  +++    G  V+ST+NR+ +
Sbjct: 121 IDYRCTTVEE-IDPRERFDIVLAMEVVEHVTDVGVFLKRCASMLKPNGLMVVSTLNRNWK 179

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEEL 302
           ++A AI+ AE++L WLP+GTH+W+ F+TP+EL
Sbjct: 180 SFALAIVGAEYVLRWLPRGTHEWNKFVTPDEL 211


>gi|89901600|ref|YP_524071.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodoferax
           ferrireducens T118]
 gi|109895912|sp|Q21UL3.1|UBIG_RHOFD RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|89346337|gb|ABD70540.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodoferax
           ferrireducens T118]
          Length = 252

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 150/240 (62%), Gaps = 15/240 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD EG ++PLH +NP RL +I + LC           P  G  ++DV
Sbjct: 22  AELAKFSDLAHRWWDLEGEFRPLHQINPLRLEWI-NHLC-----------PVAGQQVLDV 69

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR+GA VTGID   K +++A+LHA L+ +T  ++Y   + E L  +Q  
Sbjct: 70  GCGGGILADSMARLGAQVTGIDLASKALRVAQLHA-LEAQTPNLQYQEISVEALAAQQPG 128

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    ST+NRS +++  AI+ AE++L+ L
Sbjct: 129 SFDVVTCMEMLEHVPDPASVVRACATLVKPGGWVFFSTLNRSPKSFVLAIVGAEYVLNLL 188

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           P+GTH+++  + P EL    +   +D++   G  YNPLT R+ +SDD SVN++ F T+ S
Sbjct: 189 PRGTHEYAKMIRPSELASYCRSVELDLRHTRGMQYNPLTRRYWMSDDTSVNYL-FATQKS 247


>gi|149723062|ref|XP_001503913.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Equus caballus]
          Length = 370

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 147/245 (60%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P  G+
Sbjct: 91  TTVDSSEVKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTV-ANHQPGKPLSGM 149

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V +NI+ A+ H   DP     IEY     E++
Sbjct: 150 KILDVGCGGGLLTEPLGRLGASVIGIDPVAENIETAQRHKSFDPVLDKRIEYRACALEEI 209

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE    FDAVIASEV+EHV D   F +    +     +  I+TIN++  +YA  I+ AE
Sbjct: 210 VEETAETFDAVIASEVVEHVTDLETFIQCCWQVLKPGASLFITTINKTQLSYALGIVFAE 269

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE L  IL+   + V+ +AG  YNP +  W  S++ S+N+ A
Sbjct: 270 QIAGIVPKGTHTWEKFVSPEMLESILESNGLSVQTVAGMFYNPFSRYWHWSENTSLNYAA 329

Query: 341 FGTKN 345
              K+
Sbjct: 330 HAVKS 334


>gi|335772609|gb|AEH58123.1| mitochondrial hexaprenyldihydroxybenzoat methyltransferase-like
           protein [Equus caballus]
          Length = 311

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 148/245 (60%), Gaps = 3/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +    +    +P  G+
Sbjct: 32  TTVDSSEVKTFLALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTV-ANHQPGKPLSGM 90

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+L+EPL R+GA+V GID V +NI+ A+ H   DP     IEY     E++
Sbjct: 91  KILDVGCGGGLLTEPLGRLGASVIGIDPVAENIETAQRHKSFDPVLDERIEYRACALEEI 150

Query: 222 VEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           VEE  + FDAVIASEV+EHV D   F +    +     +  I+TIN++  +YA  I+ AE
Sbjct: 151 VEETAETFDAVIASEVVEHVTDLETFIQCCWQVLKPGASLFITTINKTQLSYALGIVFAE 210

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   +PKGTH W  F++PE L  IL+   + V+ +AG  YNP +  W  S++ S+N+ A
Sbjct: 211 QIAGIVPKGTHTWEKFVSPEMLESILESNGLSVQTVAGMFYNPFSRYWHWSENTSLNYAA 270

Query: 341 FGTKN 345
              K+
Sbjct: 271 HAVKS 275


>gi|344242688|gb|EGV98791.1| Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
           [Cricetulus griseus]
          Length = 367

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 145/240 (60%), Gaps = 3/240 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F A+A  WWD +G + PLH++N  R+ FIR  L +      +  RP  G+ I+DVG
Sbjct: 94  EIKTFLALAHKWWDEQGTFAPLHSMNDLRVPFIRDNLLKT-SASHHPGRPLCGMKIIDVG 152

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQRK 227
           CG  +L+EPL R+GA+V GID V +NIK+A+ H   DP     IEY     E++V+E  +
Sbjct: 153 CGLSLLTEPLGRLGASVIGIDPVAENIKVAQHHKSFDPVLDKRIEYKACALEEIVDETAQ 212

Query: 228 -FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV+ASEV+EHV D   F +    +    G+  I+T+N++  +YA  I+ AE I   +
Sbjct: 213 VFDAVVASEVVEHVIDLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIVFAEQIAGIV 272

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           PKGTH W  F++PE+L  IL+   + V+ +AG  YNP +G W  S   S+N+ A   K+S
Sbjct: 273 PKGTHTWEKFVSPEKLESILEPNGLSVQTVAGMFYNPFSGHWHWSKSSSLNYAAHAVKSS 332


>gi|354483133|ref|XP_003503749.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Cricetulus griseus]
          Length = 371

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 100/249 (40%), Positives = 150/249 (60%), Gaps = 3/249 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++   E+  F A+A  WWD +G + PLH++N  R+ FIR  L +      +  RP 
Sbjct: 89  TSQTTVDSKEIKTFLALAHKWWDEQGTFAPLHSMNDLRVPFIRDNLLKT-SASHHPGRPL 147

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCG  +L+EPL R+GA+V GID V +NIK+A+ H   DP     IEY     
Sbjct: 148 CGMKIIDVGCGLSLLTEPLGRLGASVIGIDPVAENIKVAQHHKSFDPVLDKRIEYKACAL 207

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++V+E  + FDAV+ASEV+EHV D   F +    +    G+  I+T+N++  +YA  I+
Sbjct: 208 EEIVDETAQVFDAVVASEVVEHVIDLEMFIQCCYQVLKPGGSLFITTVNKTQLSYALGIV 267

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE I   +PKGTH W  F++PE+L  IL+   + V+ +AG  YNP +G W  S   S+N
Sbjct: 268 FAEQIAGIVPKGTHTWEKFVSPEKLESILEPNGLSVQTVAGMFYNPFSGHWHWSKSSSLN 327

Query: 338 FIAFGTKNS 346
           + A   K+S
Sbjct: 328 YAAHAVKSS 336


>gi|319762554|ref|YP_004126491.1| ubiquinone biosynthesis o-methyltransferase [Alicycliphilus
           denitrificans BC]
 gi|330824571|ref|YP_004387874.1| ubiquinone biosynthesis O-methyltransferase [Alicycliphilus
           denitrificans K601]
 gi|317117115|gb|ADU99603.1| ubiquinone biosynthesis O-methyltransferase [Alicycliphilus
           denitrificans BC]
 gi|329309943|gb|AEB84358.1| ubiquinone biosynthesis O-methyltransferase [Alicycliphilus
           denitrificans K601]
          Length = 237

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 102/233 (43%), Positives = 143/233 (61%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +  ++PLH +NP RL +I                P EG   +DV
Sbjct: 10  AELAKFSELAHRWWDPDSEFRPLHQINPLRLEWINQL------------SPLEGQKALDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGILS+ +AR GA VTGID   K +++ARLHA L+ +T  ++Y   + E+L +E   
Sbjct: 58  GCGGGILSDSMARKGAEVTGIDLASKALRVARLHA-LEAQTPRVQYREISVEELAQESPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP     + + L    G    STINR+ +A+A AI+ AE++L  L
Sbjct: 117 SFDTVTCMEMLEHVPDPQSVVTACAHLVKPGGWVFFSTINRNAKAFALAIVGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++ F+ P EL    + A +DV ++ G  YNPLTGR+ LS D SVN++
Sbjct: 177 PQGTHEYAKFIRPSELAGACRNAGLDVLQVRGMQYNPLTGRYWLSGDTSVNYM 229


>gi|99034645|ref|ZP_01314593.1| hypothetical protein Wendoof_01000590, partial [Wolbachia
           endosymbiont of Drosophila willistoni TSC#14030-0811.24]
          Length = 330

 Score =  200 bits (508), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 99/234 (42%), Positives = 146/234 (62%), Gaps = 9/234 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF+ +A  WWD  G +KPLH +NP R+++I   + +  +K        + L+++DVG
Sbjct: 100 EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKI-KELKK-----CNLKELSLLDVG 153

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+G  V GID  E+NIK+A  HA        IEY  T+ E+L    +K+
Sbjct: 154 CGGGILSESMARVGINVVGIDVCEENIKVAHSHAK--KVGLNIEYIHTSIEEL-SNDKKY 210

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV +   F K +  L   EG   ISTINR+++++  AII AE+IL+WLPK
Sbjct: 211 DVVLLMEVVEHVDNLELFMKKVIELLKPEGLIFISTINRTIKSFCLAIIGAEYILNWLPK 270

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           GTH W+ FL P E+   L+  ++ ++ MAG  YN +   W+L+  + VN+I  G
Sbjct: 271 GTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCG 324


>gi|383501448|ref|YP_005414807.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           australis str. Cutlack]
 gi|378932459|gb|AFC70964.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           australis str. Cutlack]
          Length = 240

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/236 (42%), Positives = 139/236 (58%), Gaps = 9/236 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   ELAKF  I+  WW+ +G +  LH +NP RL +I   +  H+       R    L
Sbjct: 2   SSIDKKELAKFEKISHNWWNKDGEFGVLHRINPIRLEYIIEKITTHYN------RHISKL 55

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A     +  I Y  +T E+L 
Sbjct: 56  EILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETASTYAK--ENSVKINYLQSTIEEL- 112

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AYA  II AE+I
Sbjct: 113 ESDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYALGIIVAEYI 172

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           L W+PK TH +S FL P E+  +L    I++KE+ G VY+P    W LSDDI VN+
Sbjct: 173 LGWVPKNTHDYSKFLKPSEIYEMLTDTDIEIKELKGLVYDPAKNEWKLSDDIDVNY 228


>gi|340363654|ref|ZP_08685977.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria macacae
           ATCC 33926]
 gi|339885333|gb|EGQ75062.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria macacae
           ATCC 33926]
          Length = 239

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 141/233 (60%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I S     F +         G  ++DVG
Sbjct: 14  EIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDS-----FAQ-------LAGKRVLDVG 61

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A+ GA  VTGID  EK+++ A+ HA  +     I+Y C   E L  EQ  
Sbjct: 62  CGGGILSESMAKRGAAHVTGIDMAEKSLQTAQAHAAAEG-VDNIDYRCIRVEDLAAEQPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   K+ S L   +G    STINR+ ++Y   I+ AE++L+++
Sbjct: 121 SFDVVTCMEMMEHVPDPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNFV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV +  G  YN LT R+SL D   VN++
Sbjct: 181 PKGTHDWQKFITPAELARMCRQAGLDVIDTKGMTYNLLTRRYSLCDSTEVNYM 233


>gi|412990712|emb|CCO18084.1| 3-demethylubiquinone-9 3-methyltransferase [Bathycoccus prasinos]
          Length = 376

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 102/250 (40%), Positives = 142/250 (56%), Gaps = 18/250 (7%)

Query: 112 KFSAIADTWW-DAEGPYKPLHALNPTRLAFIRSTLCRHF----RKDPYSA---RPFEGLN 163
           KF   A+ WW + +GP+ PLH++NP R +FI+     HF    R+ P +    RP  G  
Sbjct: 106 KFEQDAELWWRERDGPFGPLHSMNPVRCSFIKDECAEHFSKTRRRTPTTVVDNRPLSGFR 165

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---------ETSTIEYC 214
           I+DVGCGGG+LSE L+R+GA V G+DA + N++ A+                    ++Y 
Sbjct: 166 ILDVGCGGGLLSESLSRLGADVVGLDAGKANVEAAKRRQKESQLDDDDDSGGNNGKVKYI 225

Query: 215 CTTAEKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
           C TAE L E E   FD V A EVIEHV DP  F  +L  L   +G   +STI++SMR   
Sbjct: 226 CDTAEDLGEKEPNSFDVVCALEVIEHVTDPRVFANALRKLVKDDGLVFVSTISKSMRGVL 285

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE +   +P GTH  + FL P EL ++L+RA +    MAG  YN +T +W L+ D
Sbjct: 286 GAIVFAERVAKMVPAGTHDANKFLHPSELAIVLERAGLRTNTMAGMEYNLMTKQWKLTGD 345

Query: 334 ISVNFIAFGT 343
           + +N+IA  T
Sbjct: 346 LGINYIASAT 355


>gi|260808668|ref|XP_002599129.1| hypothetical protein BRAFLDRAFT_266113 [Branchiostoma floridae]
 gi|229284405|gb|EEN55141.1| hypothetical protein BRAFLDRAFT_266113 [Branchiostoma floridae]
          Length = 317

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/304 (38%), Positives = 170/304 (55%), Gaps = 12/304 (3%)

Query: 38  KMAARHLRILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNK 97
           K+  R  R++   N ALLS RF          + ST  +++  S S     +   +N + 
Sbjct: 13  KLCGRMFRVVLRSNRALLS-RF-------NGVLDSTGRNTSVRSCSSTAYPSSDSVNESG 64

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
                +S+   E+ KF+A+A  WWD +G  K LH++N  R+  IR TL +H      S R
Sbjct: 65  TKQKKTSINPEEVKKFNALASKWWDTKGELKGLHSMNRLRVPMIRDTLVKHHSISKKS-R 123

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE-TSTIEYCCT 216
           P EGL I+DVGCGGGILS PLA++GA VTG+DA E+ +K A  H   DP    T+ +   
Sbjct: 124 PLEGLRILDVGCGGGILSVPLAKLGAQVTGLDASEEAVKAATAHMARDPSLKDTLTFTHG 183

Query: 217 TAEKLV--EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
           T E LV  E +  +DA++ASEVIEHV    +F  S   L    G+   +TINR+ ++Y  
Sbjct: 184 TVEDLVASEVRDYYDALVASEVIEHVDALDDFVGSSCDLVKPGGSLFFTTINRTTQSYYL 243

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A+IAAE+I+  +P+GTH W+ F+ PEEL   L+  +   + + G  YNP   RW+ +   
Sbjct: 244 AVIAAEYIVGVVPRGTHNWNKFVKPEELKDELKANNCHPRLIHGMFYNPFLNRWNWTGST 303

Query: 335 SVNF 338
            +N+
Sbjct: 304 EMNY 307


>gi|120611934|ref|YP_971612.1| 3-demethylubiquinone-9 3-methyltransferase [Acidovorax citrulli
           AAC00-1]
 gi|166234756|sp|A1TSA0.1|UBIG_ACIAC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120590398|gb|ABM33838.1| 3-demethylubiquinone-9 3-methyltransferase [Acidovorax citrulli
           AAC00-1]
          Length = 238

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S+ +++  AELAKFS +A  WWD E  ++PLH +NP RL +I                P 
Sbjct: 3   SSTANVDPAELAKFSELAHRWWDLESEFRPLHEINPLRLGWIDGL------------APL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +G  ++DVGCGGGIL++ +AR GATVTGID   K++K+A+LHA L+  T  I+Y   + E
Sbjct: 51  QGRRVLDVGCGGGILADAMARKGATVTGIDLATKSLKVAQLHA-LEAGTPDIQYREVSVE 109

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L EE    FD V   E++EHV DPA   ++ + L    G    STINR+ +A+  AI+ 
Sbjct: 110 ALAEESPASFDTVTCMEMLEHVPDPASVVQACARLVKPGGWVFFSTINRNAKAFLLAIVG 169

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LP+GTH+++  + P EL    + A +DV +  G  YNPLT R++LS D SVN+
Sbjct: 170 AEYVLGMLPRGTHEYAKLIKPSELATACRSARLDVLQTRGMEYNPLTRRYALSGDTSVNY 229

Query: 339 I 339
           +
Sbjct: 230 L 230


>gi|115466474|ref|NP_001056836.1| Os06g0152400 [Oryza sativa Japonica Group]
 gi|113594876|dbj|BAF18750.1| Os06g0152400 [Oryza sativa Japonica Group]
          Length = 236

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/168 (58%), Positives = 128/168 (76%), Gaps = 4/168 (2%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SA SSL  AE+A F++ A+TWWD EGP+K L  +NPTR++FIRS LC+HFR+DP S++P 
Sbjct: 61  SAASSLNPAEVAHFASFAETWWDTEGPFKHLLVMNPTRVSFIRSILCKHFRRDPNSSKPL 120

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EGL I+DVGC  G+LSEPLARMGATVTGIDA +++IKIAR+HA  DP T++IEY CTTAE
Sbjct: 121 EGLKIIDVGCAAGMLSEPLARMGATVTGIDAADESIKIARVHAASDPLTASIEYLCTTAE 180

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSE-GATVISTIN 266
            LV+E ++FDAVI  E    +    +F  SLS   +SE GA ++S I+
Sbjct: 181 DLVKENKQFDAVICLEAAGIIFKTLKFRDSLS---ISERGAFLLSYIS 225


>gi|42520230|ref|NP_966145.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Drosophila melanogaster]
 gi|42409968|gb|AAS14079.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 391

 Score =  199 bits (506), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/234 (42%), Positives = 145/234 (61%), Gaps = 9/234 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF+ +A  WWD  G +KPLH +NP R+++I   + +  +K        + L+++DVG
Sbjct: 161 EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKI-KELKK-----CNLKELSLLDVG 214

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+G  V GID  E+NIK+A  HA        IEY  T+ E+L    +K+
Sbjct: 215 CGGGILSESMARVGINVVGIDVCEENIKVAHSHAK--KVGLNIEYIHTSIEEL-SNDKKY 271

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV +   F K    L   EG   ISTINR+++++  AII AE+IL+WLPK
Sbjct: 272 DVVLLMEVVEHVDNLELFMKKAIELLKPEGLIFISTINRTIKSFCLAIIGAEYILNWLPK 331

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           GTH W+ FL P E+   L+  ++ ++ MAG  YN +   W+L+  + VN+I  G
Sbjct: 332 GTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCG 385


>gi|32033662|ref|ZP_00133973.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
           methylase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126207773|ref|YP_001052998.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|307256313|ref|ZP_07538096.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|166234757|sp|A3MZ07.1|UBIG_ACTP2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|126096565|gb|ABN73393.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306865139|gb|EFM97039.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 234

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 145/244 (59%), Gaps = 18/244 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             A    G 
Sbjct: 2   NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KANGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +AR GATVTGID   + +++AR HA+      +I+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMARAGATVTGIDMTTEPLEVARKHAE--ENGLSIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A +  +EM G+ +NP+T ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMADLRCQEMKGYHFNPVTEKFWLNNDVSCN 228

Query: 338 FIAF 341
           +IA 
Sbjct: 229 YIAM 232


>gi|225677326|ref|ZP_03788302.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590627|gb|EEH11878.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 391

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 145/234 (61%), Gaps = 9/234 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF+ +A  WWD  G +KPLH +NP R+++I   +     K+  +    E L+++DVG
Sbjct: 161 EISKFAKMAGQWWDENGKFKPLHMMNPVRVSYIIEKI-----KELKNGNLKE-LSLLDVG 214

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+G  V GID  E+NIK+A  HA        IEY  T+ E+L    +K+
Sbjct: 215 CGGGILSESMARVGINVVGIDVCEENIKVAHSHAK--KVGLNIEYIHTSIEEL-SNDKKY 271

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV +   F K    L   EG   ISTINR+++++  AII AE+IL+WLPK
Sbjct: 272 DVVLLMEVVEHVDNLELFMKKAIELLKPEGLIFISTINRTIKSFCLAIIGAEYILNWLPK 331

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           GTH W+ FL P E+   L+  ++ ++ MAG  YN +   W+L+  + VN+I  G
Sbjct: 332 GTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCG 385


>gi|322513991|ref|ZP_08067066.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
           ATCC 25976]
 gi|322120217|gb|EFX92175.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
           ATCC 25976]
          Length = 236

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 103/245 (42%), Positives = 143/245 (58%), Gaps = 18/245 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   EL KF  +A TWWD  G +KP+H LNP RL +I+             +    G  
Sbjct: 3   NIDQQELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KSNGLFGKK 51

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE +AR GA VTGID   + ++IAR HA+      TI+Y   T E  V+
Sbjct: 52  VLDVGCGGGILSEAMARAGANVTGIDMTTEPLEIARKHAE--ESGLTIDYQQATIEDFVQ 109

Query: 224 EQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            Q      KFD +   E++EHV DP    +S  AL    G    STINR+ +AY   II 
Sbjct: 110 NQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPNGVLFFSTINRTFKAYMLVIIG 169

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LPKGTH++  F+ P EL+    +A +  +EM G+ +NPLT ++ L++D+S N+
Sbjct: 170 AEYVLKILPKGTHEFEKFIKPAELLNWCDQAELHCQEMKGYHFNPLTEKFWLNNDVSCNY 229

Query: 339 IAFGT 343
           IAF T
Sbjct: 230 IAFLT 234


>gi|328771746|gb|EGF81785.1| hypothetical protein BATDEDRAFT_9853 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 265

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/256 (40%), Positives = 147/256 (57%), Gaps = 15/256 (5%)

Query: 99  HSAPS----SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH--FRKD 152
           H+ P+    S+   E+ KF+  A  WWD  G YK LH +NP R+ ++R  L  H     +
Sbjct: 2   HTQPTPSSASVNTDEINKFNRTAAEWWDPNGQYKLLHKMNPVRVKYVRDMLVAHNAVTSE 61

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD----PET 208
              A PF G+ ++D+GCGGG LSE LAR+GA V G DA  +NI +A  H  LD       
Sbjct: 62  STLALPFAGMRLLDIGCGGGFLSEALARLGAQVVGADASGENINVATAHYALDRLLKKGP 121

Query: 209 STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
            +I+Y  TTAEKL ++  +FDAV+A E++EHV DP  F ++ + L   +G    STINR+
Sbjct: 122 GSIDYRHTTAEKLAQQGEQFDAVVALEILEHVNDPKSFVRTCTQLVKPDGLMFYSTINRT 181

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
             +Y   I+ AEH L W+P GTH    ++ PEEL + L+ A   +   +G  YN LT  W
Sbjct: 182 PASYIFTILLAEHFLKWVPVGTHSHDKYIAPEELEMYLRAAQSSMLNTSGIGYNLLTKTW 241

Query: 329 SLSDD-----ISVNFI 339
           SL D+     + +N+I
Sbjct: 242 SLLDETRPCGLDMNYI 257


>gi|349610801|ref|ZP_08890127.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria sp. GT4A_CT1]
 gi|348615620|gb|EGY65132.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria sp. GT4A_CT1]
          Length = 239

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 140/233 (60%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I S     F +         G  ++DVG
Sbjct: 14  EIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDS-----FAQ-------LAGKRVLDVG 61

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A+ GA  V GID  EK+++ A+ HA  +     I+Y C   E L  EQ  
Sbjct: 62  CGGGILSESMAKRGAAHVIGIDMAEKSLQTAQTHAAAEG-VDNIDYRCIRVEDLAAEQPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   K+ S L   +G    STINR+ ++Y   I+ AE++L+++
Sbjct: 121 SFDVVTCMEMMEHVPDPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNFV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV +  G  YN LT R+SL D   VN+I
Sbjct: 181 PKGTHDWQKFITPAELARMCRQAGLDVIDTKGMTYNLLTRRYSLCDSTEVNYI 233


>gi|190149557|ref|YP_001968082.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307262877|ref|ZP_07544501.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|226725530|sp|B3H0C8.1|UBIG_ACTP7 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189914688|gb|ACE60940.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871782|gb|EFN03502.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 234

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/244 (41%), Positives = 144/244 (59%), Gaps = 18/244 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             A    G 
Sbjct: 2   NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KANGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID   + + +AR HA+      TI+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMAKAGANVTGIDMTTEPLDVARKHAE--ESGLTIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A++  +EM G+ +NPLT ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMANLRCQEMKGYHFNPLTEKFWLNNDVSCN 228

Query: 338 FIAF 341
           +IA 
Sbjct: 229 YIAM 232


>gi|21243111|ref|NP_642693.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|381171485|ref|ZP_09880630.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
 gi|390992334|ref|ZP_10262571.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           axonopodis pv. punicae str. LMG 859]
 gi|418523105|ref|ZP_13089130.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           axonopodis pv. malvacearum str. GSPB2388]
 gi|24418725|sp|Q8PK00.1|UBIG_XANAC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|21108628|gb|AAM37229.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|372552950|emb|CCF69546.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           axonopodis pv. punicae str. LMG 859]
 gi|380688120|emb|CCG37117.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
 gi|410700375|gb|EKQ58934.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           axonopodis pv. malvacearum str. GSPB2388]
          Length = 239

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 153/251 (60%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ +      R +P 
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSA------RLEPA 55

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
            AR      ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 56  GAR------VLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQAGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|389876232|ref|YP_006369797.1| 3-demethylubiquinone-9 3-methyltransferase [Tistrella mobilis
           KA081020-065]
 gi|388527016|gb|AFK52213.1| 3-demethylubiquinone-9 3-methyltransferase [Tistrella mobilis
           KA081020-065]
          Length = 263

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/236 (41%), Positives = 138/236 (58%), Gaps = 11/236 (4%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F+ +A+ WWD  GP+ PLHALNP R+ +IR T+C+   +     RP +GL I+D+G
Sbjct: 27  EIDTFTRMAEEWWDPSGPFAPLHALNPARIGYIRDTVCKTLGRPVDGMRPLDGLAIIDIG 86

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNI---KIARLHADLDPETSTIEYCCTTAEKLVE-- 223
           CGGG++SEPLAR+GA VTG+DA  +NI         A LD     I Y     E LV   
Sbjct: 87  CGGGLVSEPLARLGAAVTGLDAGARNIAVASAHAADAGLD-----ITYRAAAVEDLVAAG 141

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           E   FD V+  E++EHVADP  F  S + L    G  + ST+NR+ +++  AI+AAE++L
Sbjct: 142 ETEAFDVVLTLEIVEHVADPDLFLTSAARLLKPGGVLIASTLNRTPKSFLGAIVAAEYVL 201

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            W+P+GTH W  FL P EL   L+ A +   E  G   +P  G W +   + +N+ 
Sbjct: 202 RWVPRGTHDWRKFLRPSELARGLRNAGLRPFEAVGLNRDPAAG-WQVGGSLGINYF 256


>gi|303252523|ref|ZP_07338686.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247272|ref|ZP_07529321.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307260746|ref|ZP_07542435.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302648491|gb|EFL78684.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306856245|gb|EFM88399.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306869585|gb|EFN01373.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 234

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 144/243 (59%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             A    G 
Sbjct: 2   NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KANGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +AR GATVTGID   + +++AR HA+      +I+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMARAGATVTGIDMTTEPLEVARKHAE--ENGLSIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+ +AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTFKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A +  +EM G+ +NP+T ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMADLRCQEMKGYHFNPVTEKFWLNNDVSCN 228

Query: 338 FIA 340
           +IA
Sbjct: 229 YIA 231


>gi|402496791|ref|YP_006556051.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Onchocerca ochengi]
 gi|398650064|emb|CCF78234.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia endosymbiont
           of Onchocerca ochengi]
          Length = 388

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 173/311 (55%), Gaps = 16/311 (5%)

Query: 36  ISKMAARHLRILSGCNGALLSVRFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNN 95
           I+K+A  H      C GA      F+++ LA++ +          S      +   +L+N
Sbjct: 94  ITKLAREHGNANVLCLGA-----GFTNNELAKDIVKQFL--ETEFSKESRHKKRLDKLSN 146

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
             +     +    E++KF+ IA  WW+ +G +K LH +NP R ++I   + + F+K   +
Sbjct: 147 ISRKKNTQTYNEDEVSKFAKIASEWWNEDGKFKLLHMMNPVRGSYIIEKI-KEFKKCDLN 205

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
                 ++++DVGCGGGILSE +AR+G  V GID  E+NIK A+ +       S IEY  
Sbjct: 206 E-----ISLLDVGCGGGILSESMARIGINVVGIDICEENIKAAQSYTK--KVGSNIEYIH 258

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           T+ E+L    +K+D V+  EV+EHV +   F K    L   EG   ISTINR+++++  A
Sbjct: 259 TSIEEL-SNSKKYDVVLLMEVVEHVNNLEFFMKKAVELLKPEGLIFISTINRNIKSFCFA 317

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           II AE+IL+WLPKGTH W+ FL P E+   L+  ++ ++ M G  YN +   W+L+ D+S
Sbjct: 318 IIGAEYILNWLPKGTHNWNKFLKPSEIANHLRENNVTLQSMTGMTYNVIKREWNLTQDVS 377

Query: 336 VNFIAFGTKNS 346
           +N+I  G  N 
Sbjct: 378 INYILCGLANG 388


>gi|407691889|ref|YP_006816678.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Actinobacillus
           suis H91-0380]
 gi|407387946|gb|AFU18439.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Actinobacillus
           suis H91-0380]
          Length = 236

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 143/245 (58%), Gaps = 18/245 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   EL KF  +A TWWD  G +KP+H LNP RL +I+             +    G  
Sbjct: 3   NIDQQELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KSNGLFGKK 51

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE +A+ GA VTGID   + ++IAR HA+      TI+Y   T E  V+
Sbjct: 52  VLDVGCGGGILSEAMAKAGANVTGIDMTTEPLEIARKHAE--ESGLTIDYRQATIEDFVQ 109

Query: 224 EQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            Q      KFD +   E++EHV DP    +S  AL    G    STINR+ +AY   II 
Sbjct: 110 NQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPNGVLFFSTINRTFKAYMLVIIG 169

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LPKGTH++  F+ P EL+    +A +  +EM G+ +NPLT ++ L++D+S N+
Sbjct: 170 AEYVLKMLPKGTHEFEKFIKPAELLNWCDQAELHCQEMKGYHFNPLTEKFWLNNDVSCNY 229

Query: 339 IAFGT 343
           IAF T
Sbjct: 230 IAFLT 234


>gi|315122706|ref|YP_004063195.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496108|gb|ADR52707.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 253

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 155/247 (62%), Gaps = 3/247 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           KK+   ++    E+ +FS IA  WW+  G +KPLH +NP RL +I+  + +HF+ D + A
Sbjct: 3   KKYPNYTTKNQEEINQFSNIASEWWNPTGKFKPLHQINPVRLQYIQKKIMQHFQCDNHDA 62

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
            PF+GL I+D+GCGGG+LSEP+ARMGATV GID   KNI  A+ HA  D     I+Y   
Sbjct: 63  YPFKGLRILDLGCGGGLLSEPIARMGATVIGIDPSPKNIATAKNHA--DTHNINIDYRVA 120

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            AE + +   KFD ++  EVIEHV +   F  +  +L + +G   +STINR+ +A   AI
Sbjct: 121 CAEDIAKTDEKFDVILNMEVIEHVNNIHYFANTCCSLLLDDGLMFVSTINRTFKAMLLAI 180

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DIS 335
           + AE++L WLPKGTHQ+  F+ P E+  +L + +++V +  G VY+ L  +W LS+  + 
Sbjct: 181 VGAEYVLQWLPKGTHQYEKFVKPIEIEELLAKNNVEVIDRIGVVYSILCNKWKLSEKKMD 240

Query: 336 VNFIAFG 342
           VN++   
Sbjct: 241 VNYMLLA 247


>gi|121594803|ref|YP_986699.1| 3-demethylubiquinone-9 3-methyltransferase [Acidovorax sp. JS42]
 gi|222110598|ref|YP_002552862.1| 3-demethylubiquinone-9 3-methyltransferase [Acidovorax ebreus TPSY]
 gi|120606883|gb|ABM42623.1| 3-demethylubiquinone-9 3-methyltransferase [Acidovorax sp. JS42]
 gi|221730042|gb|ACM32862.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax ebreus
           TPSY]
          Length = 237

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 144/238 (60%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +  ++PLH +NP RL +I                P EG  ++DV
Sbjct: 10  AELAKFSELAHRWWDPDSEFRPLHQINPLRLDWINQL------------SPLEGRKVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE-QR 226
           GCGGGILS+ +AR GA VTGID   K +++ARLHA L+ ET  ++Y   + E+L  E   
Sbjct: 58  GCGGGILSDSMARKGAEVTGIDLASKALRVARLHA-LEAETPRVQYREISVEELANECPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP     + + L    G    STINR+ +A+A AI+ AE++L  L
Sbjct: 117 SFDTVTCMEMLEHVPDPQSVVAACARLVKPGGWVFFSTINRNAKAFALAIVGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           P+GTH+++ F+ P EL    ++A +DV    G  YNP+TGR+ LS D  VN++ F T+
Sbjct: 177 PQGTHEYAKFIRPSELASACRQAGLDVLHTRGMQYNPVTGRYWLSGDTDVNYL-FATR 233


>gi|442749559|gb|JAA66939.1| Putative methyltransferase [Ixodes ricinus]
          Length = 260

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 105/224 (46%), Positives = 141/224 (62%), Gaps = 5/224 (2%)

Query: 111 AKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR---KDPYS-ARPFEGLNIVD 166
           +KF A+A  WWD EG +  L  +N  R+  IR  L +  +   K P S A+P  GL I+D
Sbjct: 19  SKFDALAHRWWDPEGEFSTLSRMNTLRVPLIRDGLLQTRQLGEKVPKSRAKPLAGLRILD 78

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKLVEEQ 225
           VGCGGG+LSEPLAR+GATVTGID    +I++AR HA+ DPE   +I Y     E+LV+  
Sbjct: 79  VGCGGGLLSEPLARLGATVTGIDPTPGSIEVARAHAERDPEVGDSIVYEGVEIEELVQRS 138

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            KFDAV+ASEV+EHV +  +F KS   LT   G+   +TINR++++Y  A IAAE+I   
Sbjct: 139 VKFDAVVASEVVEHVQNYRDFVKSCVTLTEDGGSLFFTTINRTVQSYLIAKIAAEYIFRL 198

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           +P G H W+ FL PE+L   L+     V+ + G  +NPLT  WS
Sbjct: 199 VPPGLHDWNMFLPPEQLEEALETNGCHVRLIHGTFFNPLTQTWS 242


>gi|303249556|ref|ZP_07335763.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251817|ref|ZP_07533719.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302651630|gb|EFL81779.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860724|gb|EFM92735.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 234

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 18/244 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             +    G 
Sbjct: 2   NNIDQTELDKFEKMATTWWDPNGSFKPIHLLNPLRLDYIQQ-----------KSNGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID   + + +AR HA+      TI+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMAKAGANVTGIDMTTEPLDVARKHAE--ESGLTIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A++  +EM G+ +NPLT ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMANLRCQEMKGYHFNPLTEKFWLNNDVSCN 228

Query: 338 FIAF 341
           +IA 
Sbjct: 229 YIAM 232


>gi|242006508|ref|XP_002424092.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Pediculus
           humanus corporis]
 gi|212507398|gb|EEB11354.1| hexaprenyldihydroxybenzoate methyltransferase, putative [Pediculus
           humanus corporis]
          Length = 281

 Score =  197 bits (502), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 143/249 (57%), Gaps = 5/249 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD---PYSARPF 159
           S+L   E+ K  +IAD WW+  G  K LH++N  R+  +R  L    + D   P   RP 
Sbjct: 33  STLDEKEITKHVSIADGWWNEHGDLKALHSMNKLRIQLVRDGLMYTKKADVENPNGPRPL 92

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTA 218
            G+ I+DVGCGGGILSEPLAR+GA VTGID  +K I IA+ HA  DP  S  I Y C + 
Sbjct: 93  NGVKILDVGCGGGILSEPLARIGADVTGIDPGQKLIDIAKTHAAEDPTVSGKIRYLCESI 152

Query: 219 EKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E      + K+DAV+ASEVIEHVA    F +S + +    G+  I+TINR+ +A+   +I
Sbjct: 153 EDHANGHKEKYDAVVASEVIEHVASKEIFLESCANVLKPGGSIFITTINRTTQAWIAGVI 212

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++LH +PK TH W  F+TP EL  + ++     K + G  YN L   W    + +VN
Sbjct: 213 TAEYLLHLVPKETHDWEKFITPHELQFMCEKYDCFTKLVHGMFYNFLCNEWYWVQNAAVN 272

Query: 338 FIAFGTKNS 346
           +     K +
Sbjct: 273 YALHAVKKN 281


>gi|335306830|ref|XP_003360592.1| PREDICTED: LOW QUALITY PROTEIN: hexaprenyldihydroxybenzoate
           methyltransferase, mitochondrial [Sus scrofa]
          Length = 342

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/274 (39%), Positives = 157/274 (57%), Gaps = 17/274 (6%)

Query: 89  NHSQLNNNKKHSAP---------SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           N + LN  K +  P         S++   E+  F A+A  WWD +G Y PLH++N  R+ 
Sbjct: 36  NFAFLNRMKSYRLPWIRPYSTSRSTVDSNEVKTFLALAHRWWDEQGVYAPLHSMNDLRVP 95

Query: 140 FIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGG---ILSEPLARMGATVTGIDA--VEKN 194
           FIR  L +    +    +P  G+ I+DVGCGGG   +   PL R+GA+V GID   V++N
Sbjct: 96  FIRDNLLKTV-ANHQPGKPLSGMKILDVGCGGGNSFLCHXPLGRLGASVIGIDPDPVDEN 154

Query: 195 IKIARLHADLDPETST-IEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSA 252
           IK A+ H   DP     IEY   + E++VEE    FDAV+ASEV+EHV D   F +    
Sbjct: 155 IKTAQHHKSFDPVLDKRIEYRACSLEEIVEETAETFDAVVASEVVEHVIDLETFIQCCCQ 214

Query: 253 LTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASID 312
           +    G+  I+TIN++  +YA  I+ AE I   +PKGTH W  F++PE+L  IL+   + 
Sbjct: 215 VLKPGGSLFITTINKTQLSYALGIVFAEQIAGIVPKGTHTWEKFVSPEKLESILESNGLS 274

Query: 313 VKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           V+ + G +YNP +G W  S++ S+N+ A+  K+S
Sbjct: 275 VQTVTGMLYNPFSGYWHWSENTSLNYAAYAVKSS 308


>gi|418516488|ref|ZP_13082661.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           axonopodis pv. malvacearum str. GSPB1386]
 gi|410706767|gb|EKQ65224.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           axonopodis pv. malvacearum str. GSPB1386]
          Length = 239

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 153/251 (60%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ +      R +P 
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSA------RLEPA 55

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
            AR      ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 56  GAR------VLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  ++A
Sbjct: 108 VQSVEDLAAEQAGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPASFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|307245100|ref|ZP_07527193.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254055|ref|ZP_07535902.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258511|ref|ZP_07540248.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853989|gb|EFM86201.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862980|gb|EFM94927.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867415|gb|EFM99266.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 234

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 18/244 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             +    G 
Sbjct: 2   NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KSNGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID   + + +AR HA+      TI+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMAKAGANVTGIDMTTEPLDVARKHAE--ESGLTIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A++  +EM G+ +NPLT ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMANLRCQEMKGYHFNPLTEKFWLNNDVSCN 228

Query: 338 FIAF 341
           +IA 
Sbjct: 229 YIAM 232


>gi|347758194|ref|YP_004865756.1| 3-demethylubiquinone-9 3-methyltransferase [Micavibrio
           aeruginosavorus ARL-13]
 gi|347590712|gb|AEP09754.1| 3-demethylubiquinone-9 3-O-methyltransferase [Micavibrio
           aeruginosavorus ARL-13]
          Length = 251

 Score =  197 bits (501), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 144/241 (59%), Gaps = 13/241 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+  F+  +  WWD  GP+ PLH LNP R+ FIR  L         S RP  GL I+D+G
Sbjct: 13  EIRHFAKDSAHWWDETGPFAPLHRLNPVRMGFIRDVLAPDAGG---SLRPLAGLKILDIG 69

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEKLV-EE 224
           CGGG++SEPLARMGA VTG+DA +  I +A+ HA+   LD     I Y    AE L   E
Sbjct: 70  CGGGLVSEPLARMGADVTGLDADDVAIGVAQTHAEAGGLD-----IRYLNDNAEDLAGRE 124

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FD V+A E++EHVAD   F  +++ L    G  ++ST+NR+ +++A  I+AAE+IL 
Sbjct: 125 PGAFDCVVALEIVEHVADIDLFIAAIARLCRPGGTVIMSTLNRTPKSFALGIVAAEYILR 184

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGT 343
           W+P GTH W  F+ P EL   ++R  +     +G ++NPLT  +SLS  D+ VN++    
Sbjct: 185 WVPTGTHDWKKFVKPAELAAAMRRHGLIPARSSGLIFNPLTNSFSLSKRDLDVNYLMVAH 244

Query: 344 K 344
           K
Sbjct: 245 K 245


>gi|418530806|ref|ZP_13096726.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Comamonas
           testosteroni ATCC 11996]
 gi|371451885|gb|EHN64917.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Comamonas
           testosteroni ATCC 11996]
          Length = 237

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 145/233 (62%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I +              P     ++DV
Sbjct: 10  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWINAQ------------APLANQRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +++A+LHA L+  T  I+Y   + E+L +EQ  
Sbjct: 58  GCGGGILADSMARKGAKVVGIDLATKALRVAQLHA-LEAGTPNIQYHEVSVEQLAQEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    STINR+ +A+A AI+AAE++L  +
Sbjct: 117 SFDVVTCMEMLEHVPDPASIVRACAQLVKPGGWVFFSTINRNAKAFALAIVAAEYMLKMI 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH+++  L P EL   ++ A +DV+   G  +NP++GR+ LS+D SVN++
Sbjct: 177 PKGTHEYAKLLRPSELARFVREAGLDVQGSKGMEHNPISGRYWLSNDTSVNYM 229


>gi|296086849|emb|CBI33016.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/145 (66%), Positives = 114/145 (78%), Gaps = 1/145 (0%)

Query: 58  RFFSDSTLAQEPIASTAIDSASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIA 117
           RF + +  AQ  ++   + S   SP +  +  +S+ + + +    SSL   ELAKFS+IA
Sbjct: 8   RFPTLNNTAQHILSLPFLRSTVASPFLLHSRLYSE-DVSSRVPNRSSLNQVELAKFSSIA 66

Query: 118 DTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEP 177
           DTWWDAEGP+KPLH +NPTRLAFIRSTLCRHF+KDPY ARPFEGL IVDVGCGGGILSEP
Sbjct: 67  DTWWDAEGPFKPLHVMNPTRLAFIRSTLCRHFQKDPYCARPFEGLKIVDVGCGGGILSEP 126

Query: 178 LARMGATVTGIDAVEKNIKIARLHA 202
           LARMGATVTG+DAVEKNIKIARLH+
Sbjct: 127 LARMGATVTGVDAVEKNIKIARLHS 151


>gi|294624432|ref|ZP_06703121.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292601281|gb|EFF45329.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 239

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 150/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---ELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQAGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|127514783|ref|YP_001095980.1| ubiquinone biosynthesis O-methyltransferase [Shewanella loihica
           PV-4]
 gi|126640078|gb|ABO25721.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella loihica
           PV-4]
          Length = 260

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 98/236 (41%), Positives = 142/236 (60%), Gaps = 2/236 (0%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  W D  G +K + + N TRL  I   +  HF +D     PF+GL+++D+G
Sbjct: 19  EIAKFDALAKEWRDPHGKFKHVLSFNQTRLTAIEDQIASHFGRDLTQDIPFDGLSLLDIG 78

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L EPLA  GA VTGIDA E NI +A  HA+    +  IEY    A  L  EQ ++
Sbjct: 79  CGVGLLCEPLASQGARVTGIDASEHNITLAHRHAN--SWSIPIEYRHCLAGDLPREQPQY 136

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D ++ +EVIEHV D A    S   L    G  V++T+NR++R+Y   II AE+I+ +LP 
Sbjct: 137 DVILNTEVIEHVEDQAALVASCCDLLKPGGLMVMATLNRTLRSYLIGIIGAEYIMRYLPT 196

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTH W  F+TP+EL  +L    +  K + G  +NP T RW ++ + +VN++ + +K
Sbjct: 197 GTHDWHHFVTPQELDEMLTPHGLSTKGVEGMAFNPFTRRWKITSNSAVNYLLYASK 252


>gi|58696984|ref|ZP_00372466.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58698677|ref|ZP_00373568.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|225630228|ref|YP_002727019.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia sp. wRi]
 gi|58534808|gb|EAL58916.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58536770|gb|EAL60016.1| 3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate
           isomerase family protein [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|225592209|gb|ACN95228.1| 3-demethylubiquinone-9 3-methyltransferase [Wolbachia sp. wRi]
          Length = 391

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 98/234 (41%), Positives = 144/234 (61%), Gaps = 9/234 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF+ +A  WWD  G +KPLH +NP R+++I   + +  +K        + L+++DVG
Sbjct: 161 EISKFAKMAGQWWDENGKFKPLHIMNPVRVSYIIEKI-KELKK-----CNLKELSLLDVG 214

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+G  V GID  E+NIK+A  HA        IEY  T+ E+L    +K+
Sbjct: 215 CGGGILSESMARVGINVVGIDVCEENIKVAHSHAK--KVGLNIEYIHTSIEEL-SNDKKY 271

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EV+EHV +   F K    L    G   ISTINR+++++  AII AE+IL+WLPK
Sbjct: 272 DVVLLMEVVEHVDNLELFMKKAIELLKPNGLIFISTINRTIKSFCLAIIGAEYILNWLPK 331

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           GTH W+ FL P E+   L+  ++ ++ MAG  YN +   W+L+  + VN+I  G
Sbjct: 332 GTHNWNKFLKPSEIANHLRENNVTLQNMAGMEYNVIKREWNLTKGVDVNYILCG 385


>gi|326316786|ref|YP_004234458.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323373622|gb|ADX45891.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 238

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 149/241 (61%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S+ +++  AELAKFS +A  WWD E  ++PLH +NP RL +I                P 
Sbjct: 3   SSTANVDPAELAKFSELAHRWWDLESEFRPLHEINPLRLGWIDGL------------APL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +G  ++DVGCGGGIL++ +AR GATVTGID   K++K+A+LHA L+  T  I+Y   + E
Sbjct: 51  QGQRVLDVGCGGGILADAMARKGATVTGIDLATKSLKVAQLHA-LEAGTPHIQYREVSVE 109

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L EE    FD V   E++EHV DPA   ++ + L    G    STINR+ +A+  AI+ 
Sbjct: 110 ALAEESPASFDTVTCMEMLEHVPDPASVVQACARLVKPGGWVFFSTINRNAKAFLLAIVG 169

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LP+GTH++++ + P EL    + A +DV +  G  YNPLT R++LS + SVN+
Sbjct: 170 AEYVLGMLPRGTHEYANLIKPSELATACRAARLDVLQTRGMEYNPLTRRYALSGNTSVNY 229

Query: 339 I 339
           +
Sbjct: 230 L 230


>gi|345871866|ref|ZP_08823808.1| 3-demethylubiquinone-9 3-methyltransferase [Thiorhodococcus drewsii
           AZ1]
 gi|343919922|gb|EGV30663.1| 3-demethylubiquinone-9 3-methyltransferase [Thiorhodococcus drewsii
           AZ1]
          Length = 250

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 142/241 (58%), Gaps = 3/241 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H + SS+   E+A +  +A  WWD EGP+ PLH LN  R+A+IR  +      DP   RP
Sbjct: 5   HVSASSVDSDEVAYYERLAHRWWDVEGPFWPLHRLNVFRVAYIRERVATDLGLDPAQERP 64

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            +G+ ++DVGCGGGILSE +AR+GA VTG+D  EKNI +ARLHA       +I+Y   + 
Sbjct: 65  LDGVRVLDVGCGGGILSESMARLGAEVTGVDVTEKNIAVARLHA--QSSGLSIDYRVASV 122

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           ++LV+E  +FD V+  EV+EHV    +F      L    G   +++INR+  AY  AI+ 
Sbjct: 123 DRLVDEGLRFDVVLNMEVVEHVDCLPDFLADCGRLVEPGGTMFVASINRTPAAYVIAILG 182

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTH +   L P ++V        D+    G   NPLT  +S S  + VN+
Sbjct: 183 AEYILRWLPRGTHHYRK-LVPPKMVREYLGDQFDLLHETGVRVNPLTRGFSYSRWLGVNY 241

Query: 339 I 339
           +
Sbjct: 242 M 242


>gi|346725271|ref|YP_004851940.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas axonopodis
           pv. citrumelo F1]
 gi|346650018|gb|AEO42642.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas axonopodis
           pv. citrumelo F1]
          Length = 239

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 150/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSTRL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---ELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|50540308|ref|NP_001002620.1| hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Danio
           rerio]
 gi|49902779|gb|AAH75966.1| Coenzyme Q3 homolog, methyltransferase (yeast) [Danio rerio]
 gi|66910383|gb|AAH96999.1| Coenzyme Q3 homolog, methyltransferase (yeast) [Danio rerio]
 gi|182891222|gb|AAI64118.1| Coq3 protein [Danio rerio]
          Length = 319

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 149/261 (57%), Gaps = 8/261 (3%)

Query: 91  SQLNN-----NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL 145
           SQL+N     N +  + S+L  AE+ KF A+A  WWD +G    LH++N  R+ FIR  L
Sbjct: 50  SQLSNGLTRLNVRSISQSTLDPAEVRKFQAMASKWWDLQGELSALHSMNDLRVPFIRDNL 109

Query: 146 CRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD 205
             +        +P  GL I+DVGCGGG+LSEPL R+GA V GID VE +++ A LH   D
Sbjct: 110 L-NMHGVRQLGKPLSGLRILDVGCGGGLLSEPLGRLGADVLGIDPVEDSVRTAELHCSYD 168

Query: 206 PE-TSTIEY-CCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIS 263
           P+    + Y  CT  E   +E   F A++ASEV+EH+AD   F      +    G+  I+
Sbjct: 169 PDFRERVRYQACTLEELAEDEAESFHAIVASEVVEHLADLDAFANCCHQVLKPGGSLFIT 228

Query: 264 TINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNP 323
           TIN++  +Y   I+AAE +L  +P GTH W  F++PE+L  +L+     V+ + G +YNP
Sbjct: 229 TINKTNLSYVFGIVAAEQLLRIVPSGTHDWEKFISPEDLERLLESFGFYVEAIRGMMYNP 288

Query: 324 LTGRWSLSDDISVNFIAFGTK 344
           LTG WS     ++N+     K
Sbjct: 289 LTGAWSWQQSTAINYALHAVK 309


>gi|357031650|ref|ZP_09093593.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter morbifer
           G707]
 gi|356414880|gb|EHH68524.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter morbifer
           G707]
          Length = 251

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 147/246 (59%), Gaps = 11/246 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A FSA+A+ WW+  GP  PLHA+NP R  +++            +A   E L
Sbjct: 14  ASVSETEIAHFSALAENWWNPRGPMAPLHAMNPLRTQWVQKHTI------ALAATRGEPL 67

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAE 219
           +++D+GCG G+ SE  A++G    GIDA E  I+ A  H +   L P + ++ Y C +AE
Sbjct: 68  SLLDIGCGAGLASEAYAKLGFNTLGIDASEAAIRAAETHVNDHPLPPGSGSLFYRCGSAE 127

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            LV+E+ +FD V A E+IEHV DP EF   LS LT   G   +ST+NR+ R++A A I A
Sbjct: 128 DLVDERARFDVVNALEIIEHVNDPQEFLNMLSTLTTPGGMVAVSTMNRTPRSFAMAKIGA 187

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L  LP GTH W  F+ PE+L  + +RA + + ++AG  Y P   RW ++ D  VN+I
Sbjct: 188 EYLLRMLPVGTHDWKKFIRPEDLAAMARRAGLRMTDIAGMSYLP--PRWRITRDTGVNYI 245

Query: 340 AFGTKN 345
           A   K+
Sbjct: 246 AMFRKD 251


>gi|325926495|ref|ZP_08187815.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas perforans
           91-118]
 gi|325543144|gb|EGD14587.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas perforans
           91-118]
          Length = 239

 Score =  197 bits (500), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 150/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---ELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|264677569|ref|YP_003277475.1| ubiquinone biosynthesis O-methyltransferase [Comamonas testosteroni
           CNB-2]
 gi|299532463|ref|ZP_07045854.1| 3-demethylubiquinone-9 3-methyltransferase [Comamonas testosteroni
           S44]
 gi|262208081|gb|ACY32179.1| ubiquinone biosynthesis O-methyltransferase [Comamonas testosteroni
           CNB-2]
 gi|298719548|gb|EFI60514.1| 3-demethylubiquinone-9 3-methyltransferase [Comamonas testosteroni
           S44]
          Length = 237

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 144/233 (61%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I +              P     ++DV
Sbjct: 10  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWINAQ------------APLANQRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +++A+LHA L+  T  I+Y   + E+L +EQ  
Sbjct: 58  GCGGGILADSMARKGAKVVGIDLATKALRVAQLHA-LEAGTPNIQYHEVSVEQLAQEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    STINR+ +A+A AI+AAE++L  +
Sbjct: 117 SFDVVTCMEMLEHVPDPASIVRACAQLVKPGGWVFFSTINRNAKAFALAIVAAEYMLKMI 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH+++  L P EL    + A +DV+   G  +NP++GR+ LS+D SVN++
Sbjct: 177 PKGTHEYAKLLRPSELARFAREAGLDVQGSKGMEHNPISGRYWLSNDTSVNYM 229


>gi|452752852|ref|ZP_21952592.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           JLT2015]
 gi|451959924|gb|EMD82340.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           JLT2015]
          Length = 242

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/232 (46%), Positives = 139/232 (59%), Gaps = 3/232 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           + A FS +A  WW+ +G    LH +NP RLA+IR     HF  D          +++DVG
Sbjct: 9   QAALFSDMAAEWWNRKGSSALLHQVNPVRLAYIRERAAAHFGLDTTRRNWLSDRDVLDVG 68

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGIL+E LAR+G TVTGIDA E  I++AR HA    +  +I Y  TTAE LV++ R+F
Sbjct: 69  CGGGILTECLARLGGTVTGIDAAEGGIEVARDHAA--GQGLSIAYELTTAENLVQQGRRF 126

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   EV+EHVAD   F  SL+ L    G  + ST NR+  +Y   I+ AE IL  LP+
Sbjct: 127 DLVTCMEVVEHVADVPAFLSSLAKLLKPGGLLIYSTPNRTAMSYGVMIVGAEWILRLLPR 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH W+ FLTPEEL   L  A +   +  G  Y+P  G ++LSDD+ VNFI 
Sbjct: 187 GTHDWNRFLTPEELKAALAGAGLTATDCQGIAYDPARG-FALSDDMRVNFIG 237


>gi|402770946|ref|YP_006590483.1| 3-demethylubiquinone-9 3-methyltransferase [Methylocystis sp. SC2]
 gi|401772966|emb|CCJ05832.1| 3-demethylubiquinone-9 3-methyltransferase [Methylocystis sp. SC2]
          Length = 256

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/258 (41%), Positives = 149/258 (57%), Gaps = 13/258 (5%)

Query: 98  KHSAP--SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           + SAP  +S+   ++A+F+ +A+ WWD  G    LH +NP R+A+IR  + R  R D  +
Sbjct: 3   QRSAPHSASVDPEDVARFNRLAELWWDKNGKMGILHEINPIRVAYIRDHVRRFIRHDAGA 62

Query: 156 A-----RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS- 209
                 RP  G+ I D+GCGGGILSE LA++GA VTG+D    NI IA+ HA    ETS 
Sbjct: 63  LNTPGDRPLAGVRIADIGCGGGILSESLAQLGAHVTGVDPAPNNIAIAKRHA----ETSG 118

Query: 210 -TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
             I+Y   TAE L     +FDAV A EVIEHV  P EF   L  L    G   ++TI+R+
Sbjct: 119 LDIDYRNITAEDLDAAGEQFDAVAALEVIEHVEGPREFVAMLGRLLKPGGLLFLATIDRT 178

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
            ++Y  AI+AAE++L W+PKGTH    F+ P+EL   +++  +   +  G  + PLT RW
Sbjct: 179 TKSYLLAIVAAEYVLGWVPKGTHNHDKFIRPDELSSWVRQGGMREIDRVGMSFQPLTRRW 238

Query: 329 SLSDDISVNFIAFGTKNS 346
             S D  VN++    K  
Sbjct: 239 RKSHDTDVNYLMAARKQG 256


>gi|226939879|ref|YP_002794952.1| UbiG [Laribacter hongkongensis HLHK9]
 gi|226714805|gb|ACO73943.1| UbiG [Laribacter hongkongensis HLHK9]
          Length = 234

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 151/238 (63%), Gaps = 16/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++ H E+ KFS +A  WWD +G +KPLH +NP R  +I          D ++  P  G  
Sbjct: 4   NVDHVEIDKFSQMAHKWWDLDGEFKPLHQINPLRTGYI----------DHHA--PLAGTR 51

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE LAR GA+VTGID  +K++K+A+LHA LD +  +I+Y C   E L  
Sbjct: 52  VIDVGCGGGILSEALARAGASVTGIDLAKKSLKVAQLHA-LD-QGLSIDYRCIAVETLAA 109

Query: 224 E-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E    FD+VI  E++EHV DP     + +AL    G   +ST+NR++++Y  A++ AE++
Sbjct: 110 EVPASFDSVICMELLEHVPDPQSIISACAALVRPGGYVFLSTLNRNLKSYLMAVVGAEYV 169

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           L+WLP+GTH ++ F+ P E+  + ++A ++V +++G  Y PL   + L   D SVN++
Sbjct: 170 LNWLPRGTHDYARFIRPSEMARMTRQAGLEVVDVSGMRYRPLPRDYVLDPADTSVNYL 227


>gi|254428282|ref|ZP_05041989.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax sp. DG881]
 gi|196194451|gb|EDX89410.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax sp. DG881]
          Length = 266

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           + HS+  ++   E+AKF+A+A+ WWD    ++PLH +NP RL +I   +           
Sbjct: 7   QTHSSKQNVDAGEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVS---------- 56

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
               G  ++D+GCGGG+LSE +AR GA VTGID  E  + +AR+HA+       +EY  T
Sbjct: 57  --LPGKKVIDIGCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEQ--AGVAVEYLQT 112

Query: 217 TAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
            AE++ E++  ++D V   E++EHV DP+   ++ + L    G    STINR+ +A+  A
Sbjct: 113 PAEQIAEQRAGQYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMFA 172

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           I+ AE++L  LP+GTH+++  + P EL    + A ++VK+ AG VYNPLT  + L+ D+S
Sbjct: 173 IVGAEYVLRLLPRGTHEYAKLIKPSELAGWARDAGLEVKDTAGMVYNPLTQVYKLNRDVS 232

Query: 336 VNFIAFGTK 344
           VN++    K
Sbjct: 233 VNYLMHAVK 241


>gi|255066163|ref|ZP_05318018.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255049708|gb|EET45172.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 239

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/233 (44%), Positives = 139/233 (59%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I S     F +         G  ++DVG
Sbjct: 14  EIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDS-----FAQ-------LAGKRVLDVG 61

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A  GA  VTGID  EK+++ A+ HA  +     I+Y C   E L  EQ  
Sbjct: 62  CGGGILSESMATRGAAHVTGIDMAEKSLETAQAHAAAEG-VDNIDYRCIRVEDLAAEQPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   K+ S L   +G    STINR+ ++Y   I+ AE++L+ +
Sbjct: 121 SFDVVTCMEMMEHVPDPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNVV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV +  G  YN LT R+SL D   VN++
Sbjct: 181 PKGTHDWQKFITPAELARMCRQAGLDVIDTKGMTYNLLTRRYSLCDSTEVNYM 233


>gi|419796672|ref|ZP_14322198.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca VK64]
 gi|385699252|gb|EIG29563.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sicca VK64]
          Length = 239

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/233 (44%), Positives = 139/233 (59%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I S     F +         G  ++DVG
Sbjct: 14  EIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDS-----FAQ-------LAGKRVLDVG 61

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A  GA  V GID  EK+++ A+ HA  +     I+Y C   E L  EQ  
Sbjct: 62  CGGGILSESMATRGAAHVIGIDMAEKSLQTAQAHAAAEG-VDNIDYRCIRVEDLAAEQPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   K+ S L   +G    STINR+ ++Y   I+ AE++L+++
Sbjct: 121 SFDVVTCMEMMEHVPDPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNFV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV +  G  YN LT R+SL D   VN++
Sbjct: 181 PKGTHDWQKFITPAELARMCRQAGLDVIDTKGMTYNLLTRRYSLCDSTEVNYM 233


>gi|335043681|ref|ZP_08536708.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Methylophaga aminisulfidivorans MP]
 gi|333790295|gb|EGL56177.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Methylophaga aminisulfidivorans MP]
          Length = 235

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/234 (45%), Positives = 146/234 (62%), Gaps = 19/234 (8%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEGLNIVD 166
           E+AKF A+A +WWD EG  KPLH LNP RLA+I  R++L     KD          N++D
Sbjct: 12  EVAKFDALASSWWDLEGQSKPLHDLNPIRLAYIAERTSL-----KDA---------NVID 57

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR 226
           VGCGGGILSE LA+ GA VTGID  E  + IA+LHA    E  TI Y   TAE++  + +
Sbjct: 58  VGCGGGILSEALAKSGAHVTGIDMGEMPLNIAKLHAL--EEGLTIHYQHITAEEMAAQNK 115

Query: 227 -KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++DAV   E++EHV DPA    + + L    G    ST+NR  +AY  A++ AE+I+  
Sbjct: 116 EQYDAVNCLEMLEHVPDPASIISACAGLVKPGGDVFFSTLNRHPKAYLLAVLGAEYIMKM 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH +  F+ P EL    ++A + VK++ G  YNPLT ++SL +D+ VN++
Sbjct: 176 LPKGTHDYKRFIRPAELSAWCRQAGLKVKDVTGMNYNPLTRQFSLGNDVKVNYL 229


>gi|410624362|ref|ZP_11335161.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola pallidula
           DSM 14239 = ACAM 615]
 gi|410156084|dbj|GAC30535.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola pallidula
           DSM 14239 = ACAM 615]
          Length = 257

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 144/244 (59%), Gaps = 2/244 (0%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           +K +   S++  AE+ +F  +A++WWD  G YK     N  RL++    +C+ F KDP  
Sbjct: 11  SKTNENSSNVSAAEIQRFDNLAESWWDPNGKYKTALIFNQARLSYFIPQICQRFGKDPSQ 70

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
               +GL I+DVG GGG++ EPLA  GATV GIDA   +I +A+ HA       TI+Y  
Sbjct: 71  CDCLKGLTILDVGSGGGLVCEPLAARGATVVGIDASAMSIAVAKRHAL--KSGLTIDYRH 128

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
             +  L ++  KFD VI +EV+EHV D +   K    LT   G  +++T+NR++++Y  A
Sbjct: 129 MLSSDLSKQDEKFDVVINAEVVEHVPDQSALIKQCGDLTKDAGFVILATLNRTLKSYVIA 188

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           I+ AE+++ +LP GTH W+ F+ P EL  +   A +     +G  YNP++ RW L+  +S
Sbjct: 189 ILGAEYVMRYLPVGTHSWTKFVKPRELNHMASSAGLTQISESGMAYNPISRRWRLTKSLS 248

Query: 336 VNFI 339
           VN+I
Sbjct: 249 VNYI 252


>gi|121610059|ref|YP_997866.1| 3-demethylubiquinone-9 3-methyltransferase [Verminephrobacter
           eiseniae EF01-2]
 gi|121554699|gb|ABM58848.1| 3-demethylubiquinone-9 3-methyltransferase [Verminephrobacter
           eiseniae EF01-2]
          Length = 236

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 146/241 (60%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P +   AELAKFS +A  WWD +G ++PLH +NP RL +I   LC             
Sbjct: 2   SEPVNADPAELAKFSELAHRWWDPDGEFRPLHQINPLRLDWI-DGLCE-----------L 49

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G  ++DVGCGGGIL++ +AR GA V GID   K++ +A+LHA LD  T  ++Y   +AE
Sbjct: 50  SGKRVLDVGCGGGILTDAMARKGADVLGIDLASKSLCVAQLHA-LDAGTKNVQYRELSAE 108

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L +EQ   FDAV   E++EHV +PA    + SAL    G    ST+NR+ +A+  AI+A
Sbjct: 109 ALAQEQPASFDAVTCMEMLEHVPEPASVVHACSALVKPGGWVFFSTLNRNAKAFMQAIVA 168

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L+ LP+GTH+++  + P EL    + A + V+   G  YNPLT R+ LS D  VN+
Sbjct: 169 AEYVLNLLPRGTHEYAKMIRPSELAASCRSAGLHVQHAKGLAYNPLTQRYRLSADTGVNY 228

Query: 339 I 339
           +
Sbjct: 229 L 229


>gi|307249500|ref|ZP_07531488.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858493|gb|EFM90561.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 234

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 144/244 (59%), Gaps = 18/244 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   EL KF  +A TWWD  G +KP+H LNP RL +I+             A    G 
Sbjct: 2   NNIDQTELDKFEKMAATWWDPNGSFKPIHLLNPLRLDYIQQ-----------KANGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +AR  ATVTGID   + +++AR HA+      +I+Y  TT E  V
Sbjct: 51  KVLDVGCGGGILSEAMARARATVTGIDMTTEPLEVARKHAE--ENGLSIDYRQTTIEDFV 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           + Q      KFD +   E++EHV DP    +S  AL   +G    STINR+++AY   II
Sbjct: 109 QNQTACHAEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTLKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+     A +  +EM G+ +NP+T ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLNWCDMADLRCQEMKGYHFNPVTEKFWLNNDVSCN 228

Query: 338 FIAF 341
           +IA 
Sbjct: 229 YIAM 232


>gi|288576289|ref|ZP_06394294.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria mucosa ATCC
           25996]
 gi|288565811|gb|EFC87371.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria mucosa ATCC
           25996]
          Length = 239

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/233 (44%), Positives = 139/233 (59%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I S     F +         G  ++DVG
Sbjct: 14  EIAKFSQIADKWWDKNGEFKPLHDINPLRLGYIDS-----FAQ-------LAGKRVLDVG 61

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A+ GA  VTGID  EK+++ A+ HA  +     I+Y C   E L  EQ  
Sbjct: 62  CGGGILSESMAKRGAAHVTGIDMAEKSLQTAQAHAAAEG-VDNIDYRCIRVEDLAAEQPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV +PA   K+ S L   +G    STINR+ ++Y   I+ AE++L+ +
Sbjct: 121 SFDVVTCMEMMEHVPNPAAIVKACSELVKPDGMVFFSTINRNPKSYLHLIVGAEYVLNVV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV    G  YN LT R+SL D   VN++
Sbjct: 181 PKGTHDWQKFITPAELARMCRQAGLDVINTKGMTYNLLTRRYSLCDSTEVNYM 233


>gi|115903815|ref|XP_790531.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Strongylocentrotus purpuratus]
          Length = 351

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 150/253 (59%), Gaps = 3/253 (1%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLC-RHFRKDPYS 155
           ++ +A +++   EL KF  ++  +W   G ++ LH++N  R+  IR TL  +    +  +
Sbjct: 90  EQGNASTTMDPEELEKFRILSQQFWKESGDFQALHSMNDLRVPLIRDTLLNQKGGANRSN 149

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYC 214
            RP  G  IVDVGCGGGIL+EPLAR+GATV G+DA  +NI++A+ H   DP     ++Y 
Sbjct: 150 TRPLHGATIVDVGCGGGILAEPLARLGATVIGVDATPENIEVAQHHVSHDPTIRGNVKYI 209

Query: 215 CTTAEKLV-EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
           C TAE LV  E   FDA++ SEV+EHV+    F K+ + L    G+   +++N++  +YA
Sbjct: 210 CGTAEDLVCTEDEAFDALVCSEVLEHVSHKENFIKTCAELVKPGGSIFFTSVNQTWLSYA 269

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
             I+ AE +L  +P GTH W+ F++P  +  +L+     V+   G +YNP T RWS  +D
Sbjct: 270 LGIVMAEKVLGLVPDGTHDWNKFISPGYIQRVLEENDCSVRLTHGMMYNPATKRWSWMED 329

Query: 334 ISVNFIAFGTKNS 346
            SVN+     K +
Sbjct: 330 TSVNYAICAVKRT 342


>gi|325918740|ref|ZP_08180832.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325535034|gb|EGD06938.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 260

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/252 (40%), Positives = 150/252 (59%), Gaps = 17/252 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N    S  S+   AEL KF+A+A+ WWDA+GP KPLHALNP RLA++             
Sbjct: 23  NPTTQSTSSNFHQAELDKFAALANRWWDADGPQKPLHALNPVRLAYV------------- 69

Query: 155 SARP-FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
           SAR    G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y
Sbjct: 70  SARQELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LE-SGVQVDY 127

Query: 214 CCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+
Sbjct: 128 RVQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAF 187

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS 
Sbjct: 188 ALAVVGAEYIARLLPKGTHHYEDFIKPAELAAWLRGADLQLQDVSGMLYEPWRNRARLSS 247

Query: 333 DISVNFIAFGTK 344
              VN++A+  +
Sbjct: 248 RTEVNYLAYAVR 259


>gi|78048130|ref|YP_364305.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|109895926|sp|Q3BSF8.1|UBIG_XANC5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|78036560|emb|CAJ24251.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 239

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 149/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSTRL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---ELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FD V   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDTVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|294664926|ref|ZP_06730241.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292605296|gb|EFF48632.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 239

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 150/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+  H+  S+   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTHAKSSNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---ELAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  E+   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAERAGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAGLQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|319639441|ref|ZP_07994191.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria mucosa C102]
 gi|317399336|gb|EFV80007.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria mucosa C102]
          Length = 237

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 138/234 (58%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKFS IAD WWD  G +KPLH +NP RL +I          D Y+     G  ++DV
Sbjct: 11  GEIAKFSQIADKWWDKNGEFKPLHDINPLRLDYI----------DGYAG--LAGKRVLDV 58

Query: 168 GCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGILSE +A+ GA  VTGID  EK+++ A  HA      + I+Y C   E L  EQ 
Sbjct: 59  GCGGGILSESMAKRGAEHVTGIDMAEKSLQTAAAHA-ASQHVANIDYRCIRVEDLAAEQP 117

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA   ++ + L   +G    STINR+ ++Y   I+ AE++L +
Sbjct: 118 HSFDVVTCMEMMEHVPDPAAIVQACAKLVKPDGMVFFSTINRNPKSYLHLIVGAEYLLKF 177

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH W  F+TP EL  + ++A +D     G  YN L+GR+SL D   VN++
Sbjct: 178 VPKGTHDWKKFITPAELARMCRQAGLDTVGSKGMTYNLLSGRYSLCDSTEVNYM 231


>gi|386828476|ref|ZP_10115583.1| ubiquinone biosynthesis O-methyltransferase [Beggiatoa alba B18LD]
 gi|386429360|gb|EIJ43188.1| ubiquinone biosynthesis O-methyltransferase [Beggiatoa alba B18LD]
          Length = 232

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 141/242 (58%), Gaps = 14/242 (5%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   ELAKFS +A  WWDA   +KPLH +NP RL FI +            +    G  
Sbjct: 2   NVDQQELAKFSTLAARWWDANSEFKPLHDINPLRLQFIET-----------HSDGLAGKQ 50

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGGILSE +A+ GA VT ID  E  + +ARLH  L      + Y   TAE L  
Sbjct: 51  VLDIGCGGGILSESMAKKGAEVTAIDMSEAALSVARLH--LYESQVQVNYRAMTAEALAL 108

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EQ  ++D V   E++EHV DPA   ++   L    G    STINR+ +AY  AI+ AE+I
Sbjct: 109 EQPAQYDVVTCMEMLEHVPDPASIIQACHTLVKPNGYVFFSTINRNPKAYLFAILGAEYI 168

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L  LPKGTH ++ F+ P EL   ++ A ++++   G  YNPLT  + L++DISVN++A+ 
Sbjct: 169 LQLLPKGTHDYAKFIRPSELATWIREADLNIQGFTGMSYNPLTKHYWLNNDISVNYLAYA 228

Query: 343 TK 344
            +
Sbjct: 229 QR 230


>gi|114704322|ref|ZP_01437230.1| 3-demethylubiquinone-9 3-methyltransferase [Fulvimarina pelagi
           HTCC2506]
 gi|114539107|gb|EAU42227.1| 3-demethylubiquinone-9 3-methyltransferase [Fulvimarina pelagi
           HTCC2506]
          Length = 246

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 150/237 (63%), Gaps = 2/237 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ +FS +A  WW+ +G +KPLH  NP RL  IR  +  +F +    ++PFEGL
Sbjct: 4   NTVDQDEIERFSRLAAEWWNPKGKFKPLHKFNPVRLEEIREQVALNFDRQLGQSKPFEGL 63

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+++EP+ R+G  VT  DA + NI++A+LHA+      +I+Y  TTAE + 
Sbjct: 64  TLLDIGCGGGLIAEPMRRLGFEVTAADASKTNIEVAKLHAE--EAGLSIDYRATTAEAIA 121

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            E   FD V+A E++EHVAD   F  + + +    G   ++TINR+ +A A AI+ AE++
Sbjct: 122 AEGSMFDVVLALEIVEHVADVPFFLTTCADMVKPGGLLFVATINRTAKALAFAIVGAEYV 181

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L WLP+GTHQ+S  + PEE+   +  A + V E  G VY+PL   W  S D SVN++
Sbjct: 182 LGWLPRGTHQYSKLVRPEEVEGPVSAAGMTVIEELGVVYHPLEDAWKRSTDTSVNYM 238


>gi|406975960|gb|EKD98556.1| hypothetical protein ACD_23C00375G0001 [uncultured bacterium]
          Length = 236

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 148/241 (61%), Gaps = 21/241 (8%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN---I 164
           AELAKFS +A  WWD +  ++PLH +NP RL +I                   GL+   +
Sbjct: 10  AELAKFSELAHRWWDTDSEFRPLHQINPLRLGWIDG---------------LAGLSSKVV 54

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
           +DVGCGGGILS+ +AR GA VTGID   K +++ARLHA L+ +TS +++   + E L  E
Sbjct: 55  LDVGCGGGILSDSMARKGANVTGIDLSTKALRVARLHA-LEAQTSNLQFREVSVEALAAE 113

Query: 225 Q-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           Q   FD V   E++EHV DPA   ++ + L    G    STINR+++A+A AI+ AE+IL
Sbjct: 114 QPASFDVVTCMEMLEHVPDPASVVQACAQLVKPGGWVFFSTINRNLKAFALAIVGAEYIL 173

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           + LP+GTH+++  + P EL    + A +DV    G  +NPLT R+SL +D SVN++ F T
Sbjct: 174 NMLPRGTHEYAKLIRPSELAASCRAAGLDVTHTCGLEHNPLTRRYSLGNDTSVNYM-FAT 232

Query: 344 K 344
           +
Sbjct: 233 R 233


>gi|149928287|ref|ZP_01916530.1| ubiquinone biosynthesis O-methyltransferase [Limnobacter sp.
           MED105]
 gi|149823016|gb|EDM82258.1| ubiquinone biosynthesis O-methyltransferase [Limnobacter sp.
           MED105]
          Length = 239

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 147/239 (61%), Gaps = 14/239 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++ HAELAKFSA+A  WWD    ++PLH +NP RL +I   +              +G 
Sbjct: 8   NNVDHAELAKFSALASKWWDPNSEFRPLHEINPLRLNWIDERV------------GLKGK 55

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGIL+E +AR GA V GID  +K++K+A LH  L+   + + Y   +AE+L 
Sbjct: 56  RVLDVGCGGGILAESMARRGADVLGIDLADKSLKVAELH-KLETGVNNVNYRFVSAEQLA 114

Query: 223 EEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E+R  FD V   E++EHV DPA+  ++ + L    G    STINR+ +++  AI+ AE+
Sbjct: 115 AEERGTFDVVTCLEMLEHVPDPAQTIQACADLCKPGGWLFFSTINRNPKSFVFAIVGAEY 174

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +L+ LPKGTH++  F+ P EL    +++ +D  E+ G VYNPLT  + L+ D  VN++ 
Sbjct: 175 VLNLLPKGTHEYKKFIKPSELAQYARQSKLDFSEIIGLVYNPLTKVYRLARDTDVNYMV 233


>gi|452823702|gb|EME30710.1| hexaprenyldihydroxybenzoate methyltransferase [Galdieria
           sulphuraria]
          Length = 278

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 147/243 (60%), Gaps = 7/243 (2%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR-PFEGLNIVD 166
           +E+AKF+  A  WW   GP  PL   NP R+A IR+ + ++  +     R P +G++I+D
Sbjct: 19  SEVAKFNQHAKEWWSLTGPVAPLLRFNPARVAVIRAAIEKYSIESKERRRLPLQGISILD 78

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ 225
           VGCGGGIL EPL R+GA+V GID  E +IK+AR HA LDP     ++Y   +   LV E+
Sbjct: 79  VGCGGGILCEPLGRLGASVLGIDEAEDSIKVARKHASLDPFLEMFVKYRLCSLSDLVSEK 138

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            +FD V   EVIEHV +P  F  +L+     +G  +ISTINR++ ++ TAI  AE+IL W
Sbjct: 139 VQFDCVTCLEVIEHVDEPQLFLHTLAQTVRPQGLLIISTINRTITSWLTAIFMAENILGW 198

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMA--GFVYNPLTGRWSLSDDISVNFIAFGT 343
           +PKGTHQW   + PEE+   L +   D+K ++  GF  +P     SL+ ++  N++    
Sbjct: 199 IPKGTHQWQKLVRPEEITSCLSK---DMKLLSSVGFSVDPFDRNISLTRNLGTNYMMVWK 255

Query: 344 KNS 346
           K S
Sbjct: 256 KCS 258


>gi|241759138|ref|ZP_04757246.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria flavescens
           SK114]
 gi|241320557|gb|EER56834.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria flavescens
           SK114]
          Length = 242

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 138/234 (58%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKFS IAD WWD  G +KPLH +NP RL +I          D Y+     G  ++DV
Sbjct: 16  GEIAKFSQIADKWWDKNGEFKPLHDINPLRLDYI----------DGYAG--LAGKRVLDV 63

Query: 168 GCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGILSE +A+ GA  VTGID  EK+++ A  HA      + I+Y C   E L  EQ 
Sbjct: 64  GCGGGILSESMAKRGAEHVTGIDMAEKSLQTAAAHA-ASQHVANIDYRCIRVEDLAAEQP 122

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DP+   ++ + L   +G    STINR+ ++Y   I+ AE++L +
Sbjct: 123 HSFDVVTCMEMMEHVPDPSAIVQACAKLVKPDGMVFFSTINRNPKSYLHLIVGAEYLLKF 182

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH W  F+TP EL  + ++A +D     G  YN L+GR+SL D   VN++
Sbjct: 183 VPKGTHDWKKFITPAELARMCRQAGLDTVGSKGMTYNLLSGRYSLCDSTEVNYM 236


>gi|299116524|emb|CBN74712.1| 3-demethylubiquinone-9 3-methyltransferase [Ectocarpus siliculosus]
          Length = 323

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 154/263 (58%), Gaps = 9/263 (3%)

Query: 85  NTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWD--AEGPYKPLHALNPTRLAFI- 141
            T +  ++     +HS  +++   EL KF  +   WW+  +     PLH++N TR+ +I 
Sbjct: 51  GTGQEGTEGIRESRHSR-ANISEEELEKFRHLEKEWWNPASRQGAGPLHSMNVTRVQYIV 109

Query: 142 RSTLCRHFRKDPY--SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIAR 199
           R          P+  SA P  GL  +DVGCGGG+LSE LAR+GA V G+D   +N+ +A 
Sbjct: 110 RQVGSSLPEASPHWGSATPLAGLRALDVGCGGGLLSESLARLGAEVVGVDPSPENVAVAS 169

Query: 200 LHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGA 259
            HA  DP T TI Y  TTAE+L     +FD V + EVIEHV DPA F  SL++LT   G 
Sbjct: 170 AHAQGDPLTRTIRYEATTAEELENRGEQFDLVTSLEVIEHVEDPAGFVSSLASLTRPGGM 229

Query: 260 TVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASI--DVKEMA 317
             +STINR+ +++A AI+ AE++   +P GTH W  F+ PE+L  +LQ      ++ E  
Sbjct: 230 LAMSTINRTAKSFALAIVGAEYLAGIVPVGTHDWRKFVPPEDLAAMLQAHGFPGELVETC 289

Query: 318 GFVYNPLTGRWSLS-DDISVNFI 339
           G +YNP++GRW  +  D+ VN+I
Sbjct: 290 GLMYNPVSGRWKENPGDLDVNYI 312


>gi|221068228|ref|ZP_03544333.1| ubiquinone biosynthesis O-methyltransferase [Comamonas testosteroni
           KF-1]
 gi|220713251|gb|EED68619.1| ubiquinone biosynthesis O-methyltransferase [Comamonas testosteroni
           KF-1]
          Length = 237

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 142/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I +              P     ++DV
Sbjct: 10  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWINAQ------------APLANQRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +++A+LHA L+  T  I+Y   + E+L +EQ  
Sbjct: 58  GCGGGILADSMARKGAKVVGIDLATKALRVAQLHA-LETGTPNIQYHEVSVEQLAQEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    STINR+ +A+A AI+AAE++L  +
Sbjct: 117 SFDVVTCMEMLEHVPDPASIVRACAQLVKPGGWVFFSTINRNAKAFALAIVAAEYMLKMI 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH++   L P EL    + A +D +   G  +NP++GR+ LS+D SVN++
Sbjct: 177 PKGTHEYGKLLRPSELARFAREAGLDAQGTKGMEHNPISGRYWLSNDTSVNYM 229


>gi|409399764|ref|ZP_11250005.1| 3-demethylubiquinone-9 3-methyltransferase [Acidocella sp. MX-AZ02]
 gi|409131120|gb|EKN00839.1| 3-demethylubiquinone-9 3-methyltransferase [Acidocella sp. MX-AZ02]
          Length = 235

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/233 (43%), Positives = 140/233 (60%), Gaps = 11/233 (4%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F A+A  WWDA GP +PLH LNP R  ++   + R            EG++I+DVG
Sbjct: 10  EIARFDALAARWWDARGPMRPLHMLNPVRAGWVAQRVRRA---------KGEGVSILDVG 60

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+E LA+ G  VTG+DA  + I +AR HA    +   I Y   TAE L  E   F
Sbjct: 61  CGAGLLAEALAKDGFAVTGLDAGAEVIDVARGHAQ--GQGLNITYRHGTAEGLAAEGASF 118

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
             V A E+IEHVADP EF KSL AL    G   +ST+NR+ ++YA A   AE++L  LP 
Sbjct: 119 PVVTALEIIEHVADPLEFLKSLRALLAPGGVLFLSTLNRTPQSYAVAKFGAEYVLRLLPV 178

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           GTH W  F+ PEEL  + ++A + + + AG  Y+P    +++S D+SVN+IA 
Sbjct: 179 GTHDWKMFIKPEELGRLCRQAGLRLTDTAGLSYSPRQAGFTVSRDLSVNYIAM 231


>gi|33152763|ref|NP_874116.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus ducreyi
           35000HP]
 gi|39932505|sp|Q7VKW2.1|UBIG_HAEDU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|33148987|gb|AAP96505.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus ducreyi
           35000HP]
          Length = 236

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 18/243 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   EL+KF  +A +WWD  G +KP+H LNP R  +I++            A    G  
Sbjct: 3   NVDQQELSKFEQMAHSWWDPNGSFKPIHLLNPLRFNYIQT-----------KANGLFGKK 51

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL-- 221
           ++DVGCGGGILSE +A+ GA VTGID   + ++IA+ HA       TI Y  TT E L  
Sbjct: 52  VLDVGCGGGILSEAMAQAGAIVTGIDMTTEPLEIAKQHAI--ENGLTIHYQQTTVEDLRL 109

Query: 222 ---VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
                   KFD V   E++EHV DP    +S  AL   +G   +STINR+++AY   +I 
Sbjct: 110 NHTACNAEKFDVVTCMEMLEHVPDPLSVIQSCKALLKPDGVLFLSTINRTLKAYMLVVIG 169

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LPKGTH++  F+ P EL+    +AS++ KEM G+ +NPLT ++ L++D+S N+
Sbjct: 170 AEYLLKMLPKGTHEFEKFIKPAELLTWCDQASLECKEMKGYHFNPLTEKFWLNNDVSCNY 229

Query: 339 IAF 341
           IA 
Sbjct: 230 IAM 232


>gi|254361815|ref|ZP_04977950.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261491598|ref|ZP_05988181.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261494958|ref|ZP_05991427.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|452745361|ref|ZP_21945196.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mannheimia
           haemolytica serotype 6 str. H23]
 gi|153093350|gb|EDN74346.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261309367|gb|EEY10601.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261312724|gb|EEY13844.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|452086510|gb|EME02898.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Mannheimia
           haemolytica serotype 6 str. H23]
          Length = 237

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 143/243 (58%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   E+ KF  +A TWWD  G +KP+H LNP RLA+I              +    G 
Sbjct: 2   QNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILE-----------KSNGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID   + +++A+ HA     ++D + +TIE     
Sbjct: 51  KVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQTTIEN--FL 108

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           A+     Q KFD +   E++EHV DP    +S  AL   +G    STINR+ +AY   II
Sbjct: 109 AKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTFKAYMLVII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH++  F+ P EL+    +A +  +EM G+ +NPLT ++ L++D+S N
Sbjct: 169 GAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEKFWLNNDVSCN 228

Query: 338 FIA 340
           +IA
Sbjct: 229 YIA 231


>gi|333913782|ref|YP_004487514.1| 3-demethylubiquinone-9 3-methyltransferase [Delftia sp. Cs1-4]
 gi|333743982|gb|AEF89159.1| 3-demethylubiquinone-9 3-methyltransferase [Delftia sp. Cs1-4]
          Length = 240

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 144/234 (61%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I +              P +G  I+DV
Sbjct: 12  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWIDAQ------------APLKGRRILDV 59

Query: 168 GCGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGIL++ +AR GA  V GID   K +++A+LHA L+  T  I Y   + E+L EEQ 
Sbjct: 60  GCGGGILADSMARKGAREVVGIDLATKALRVAQLHA-LETGTPNIHYHEVSVERLAEEQP 118

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA    + + L    G    STINRS +A+  AI+AAE++L  
Sbjct: 119 GSFDVVTCMEMLEHVPDPASVVAACAELVKPGGWVFFSTINRSAKAFGLAIVAAEYLLKM 178

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH+++  + P EL +  ++A +D++   G  +NP+TGR+ LS D SVN++
Sbjct: 179 IPKGTHEYAKLIQPSELAMFARQAGLDLQASKGLQHNPITGRYWLSADTSVNYM 232


>gi|114773221|ref|ZP_01450456.1| 3-demethylubiquinone-9 3-methyltransferase [Rhodobacterales
           bacterium HTCC2255]
 gi|114546340|gb|EAU49249.1| 3-demethylubiquinone-9 3-methyltransferase [alpha proteobacterium
           HTCC2255]
          Length = 277

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 98/256 (38%), Positives = 148/256 (57%), Gaps = 20/256 (7%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD-PYS--- 155
           S   +L   E+A+F ++A+ WWD  G Y    A N  RLA+  S +  HF  D P+    
Sbjct: 10  SVSQTLDPEEVARFDSLAEQWWDPIGKYGQAIAFNHARLAYFTSQIAEHFALDLPFEPAP 69

Query: 156 ----------ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD-- 203
                      +P +GL+I+DVGCGGG++SEPLAR+GA VTGIDA   +I++A  HA   
Sbjct: 70  NDNLWRLYDLGKPLQGLSILDVGCGGGLVSEPLARLGAEVTGIDASAMSIQVATQHAQNT 129

Query: 204 LDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIS 263
           L P T    Y  T AE LV +Q++FD VI +EV+EHV D A      + L    G  +++
Sbjct: 130 LTPVT----YVHTLAEDLVAQQQQFDVVINAEVVEHVQDQALLINQCAQLVKPGGMLILA 185

Query: 264 TINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNP 323
           T+NR++ +Y  AI+ AE+++ +LP GTH WS F+ P EL    +    ++    G  +NP
Sbjct: 186 TLNRTVISYVFAIVGAEYVMRYLPIGTHSWSKFVKPTELSAWAKSGGCELTSHTGMKFNP 245

Query: 324 LTGRWSLSDDISVNFI 339
              RW  ++++++N++
Sbjct: 246 WNKRWRYTENMAINYV 261


>gi|289665704|ref|ZP_06487285.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. vasculorum NCPPB 702]
 gi|289671282|ref|ZP_06492357.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. musacearum NCPPB 4381]
          Length = 239

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 149/251 (59%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+   S   + + +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTQSTSGNFRQSELDKFAALANRWWDADGPQKPLHALNPVRLEYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---DLAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRNAELRLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  +
Sbjct: 228 TEVNYLAYAVR 238


>gi|149774747|gb|ABR28419.1| ubiquinone biosynthesis O-methyl-transferase [Delftia
           tsuruhatensis]
          Length = 240

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 144/234 (61%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I + +            P +G  I+DV
Sbjct: 12  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWIDAQV------------PLKGRRILDV 59

Query: 168 GCGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGIL++ +AR GA  V GID   K +++A+LHA L+  T  I Y   + E+L +EQ 
Sbjct: 60  GCGGGILADSMARKGAREVVGIDLATKALRVAQLHA-LETGTPNIHYHEVSVERLAQEQP 118

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA    + + L    G    STINRS +A+  AI+AAE++L  
Sbjct: 119 GSFDVVTCMEMLEHVPDPASVVSACAELVKPGGWVFFSTINRSAKAFGLAIVAAEYLLKM 178

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH++   + P EL +  ++A +D++   G  +NP+TGR+ LS D SVN++
Sbjct: 179 IPKGTHEYGKLIQPSELAMFARQAGLDLQASKGLQHNPITGRYWLSADTSVNYM 232


>gi|47207209|emb|CAF96447.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 303

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 144/242 (59%), Gaps = 7/242 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL +F  +A  WWD +G +  LHA+N  R+ FIR  L      + +  RP  GL I+D G
Sbjct: 43  ELRRFQLLASKWWDEQGEFAALHAMNDLRVPFIRDNLL-SLHPENHPGRPLAGLKILDAG 101

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEY-CCTTAEKLVEEQR 226
           CGGG+L+EPL R+GA+V GID VE +I  A++HA  DPE    + Y  CT  E   EE+ 
Sbjct: 102 CGGGLLTEPLGRLGASVLGIDPVEDSISTAQVHASHDPELRGRVRYQACTLEELSAEEEE 161

Query: 227 ----KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
               +FDAV+ASEV+EH+AD   F    + +    G+  I+TIN++  ++A  I+AAE +
Sbjct: 162 AEAGRFDAVVASEVVEHLADLETFAFCCNHMLKPGGSLFITTINKTNLSFALGIVAAEQL 221

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L  +P GTH W  F+TP EL  +L+     V+ + G +YNPL+G WS +   ++N+    
Sbjct: 222 LRIVPSGTHDWEKFITPVELERLLESNGFSVQSVQGMLYNPLSGAWSWTSSTAINYALHA 281

Query: 343 TK 344
            K
Sbjct: 282 VK 283


>gi|88705537|ref|ZP_01103247.1| 3-demethylubiquinone-9 3-methyltransferase [Congregibacter
           litoralis KT71]
 gi|88700050|gb|EAQ97159.1| 3-demethylubiquinone-9 3-methyltransferase [Congregibacter
           litoralis KT71]
          Length = 239

 Score =  194 bits (492), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 5/242 (2%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+ +++A+A TWWD +GP  PLH LN  R+ F+   +  HF      A P +GL 
Sbjct: 2   SVSAEEIKRYNALAATWWDPKGPMWPLHRLNALRVPFVVEAVSEHFGLKTSQA-PLKGLT 60

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCG G+LSE +AR GA VT +D  ++NI IA  HA    E   IEY     + +  
Sbjct: 61  VLDIGCGAGLLSEAMARAGAVVTAVDPAQRNIAIAMEHAA--AEDLAIEYIHGDIDSVA- 117

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
             R+FD V+  EV+EHV +   F  S  A     G  +++T+NR+ +++  AII  E++L
Sbjct: 118 -HRQFDVVLNMEVVEHVENLDAFMASCGACVAGGGVQIVATLNRNFKSWLFAIIGGEYVL 176

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
            WLPKGTHQW  F+TPEE   +L  A +   + AG   NP T  +SL+DD SVN++    
Sbjct: 177 RWLPKGTHQWRKFVTPEETRRMLTAAGLTPLKSAGVAVNPFTRSYSLTDDTSVNYMIVAA 236

Query: 344 KN 345
           ++
Sbjct: 237 RH 238


>gi|408375134|ref|ZP_11172810.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax
           hongdengensis A-11-3]
 gi|407765015|gb|EKF73476.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax
           hongdengensis A-11-3]
          Length = 232

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 147/239 (61%), Gaps = 15/239 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKF+A+A+ WWD    ++PLH +NP RL +I   +               G  ++D+
Sbjct: 7   AEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVS------------LPGKKVIDI 54

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGG+LSE +AR GA VTGID  E  + +AR+HA+       +EY  T AE++ E++  
Sbjct: 55  GCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAE--QAGVAVEYLQTPAEQIAEQRAG 112

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DP+   ++ +AL    G    STINR+ +A+  AI+ AE+IL  L
Sbjct: 113 QYDVVTCLEMLEHVPDPSSVIRACAALVKPGGHVFFSTINRNPKAFMFAIVGAEYILRLL 172

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           P+GTH+++  + P EL    + A++DV++  G VYNPLT  + L+ D+SVN++ +  K 
Sbjct: 173 PRGTHEYAKLIRPSELAGWARDAALDVQDTTGMVYNPLTQVYKLNRDVSVNYLMYARKG 231


>gi|88810640|ref|ZP_01125897.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrococcus mobilis
           Nb-231]
 gi|88792270|gb|EAR23380.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrococcus mobilis
           Nb-231]
          Length = 234

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/246 (42%), Positives = 147/246 (59%), Gaps = 20/246 (8%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P ++   ELAKF  IA  WWD EG +KPLH +NP RLA++   L               G
Sbjct: 2   PPNIDPLELAKFDRIASRWWDPEGEFKPLHQINPLRLAYVEQCL--------------GG 47

Query: 162 L---NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           L    IVDVGCGGG+LSE +AR GA V GID  E+++ +ARLHA      + ++Y  T+ 
Sbjct: 48  LANRRIVDVGCGGGLLSEAMARRGARVLGIDLAERSLAVARLHAA--EAHTAVDYQLTSV 105

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+L + +  +FDAV   E++EHV DPA    + + L    G  + STINR+ +AY  AII
Sbjct: 106 EELAQSRPHEFDAVTCMELLEHVPDPAMSISACARLLRPGGVAIFSTINRNPKAYLLAII 165

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LP GTH +  F+ P EL    +   + ++++ G  YNP+T R++LS D+SVN
Sbjct: 166 GAEYVLRLLPCGTHDYRQFIRPSELGAWARAQGLLLQDLRGLGYNPITRRYALSHDVSVN 225

Query: 338 FIAFGT 343
           ++A  T
Sbjct: 226 YLAHFT 231


>gi|337279004|ref|YP_004618475.1| DHHB methyltransferase [Ramlibacter tataouinensis TTB310]
 gi|334730080|gb|AEG92456.1| DHHB methyltransferase [Ramlibacter tataouinensis TTB310]
          Length = 233

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/233 (43%), Positives = 142/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I +              P  G  ++DV
Sbjct: 8   AELAKFSELAHRWWDPESEFRPLHDINPLRLEWIDAQC------------PLAGRRVLDV 55

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA+V GID   K +K+A+LHA L+ +T  IEY   + E L  E   
Sbjct: 56  GCGGGILADSMARKGASVLGIDLAAKALKVAQLHA-LEAQTPGIEYREISVEALAAEAPA 114

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV   E++EHV DPA   ++ +AL    G    STINR+ +A+  AI+ AE++L  L
Sbjct: 115 SFDAVTCMEMLEHVPDPASAVRACAALVKPGGWVFFSTINRNAKAFLFAIVGAEYVLGLL 174

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH++  F+ P EL    + A + + +M G  YNPLT R+ LS D SVN++
Sbjct: 175 PRGTHEYLKFIRPSELASHCRAAGLGLSQMRGLEYNPLTRRYKLSGDTSVNYL 227


>gi|367474052|ref|ZP_09473585.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. ORS 285]
 gi|365273643|emb|CCD86053.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. ORS 285]
          Length = 260

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 141/239 (58%), Gaps = 2/239 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
            PS++  AE+A+FS +AD WW  +G +K +HA N  R++++   L     +DP +  P  
Sbjct: 17  GPSTIDPAEIARFSRLADEWWKPDGAFKLVHAFNAARVSYLCDRLPALVGRDPAANLPLA 76

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL I+DVGCG GI++EPL+R+GA   GIDA E+N+ +A  HA    +++ + Y     E 
Sbjct: 77  GLEIIDVGCGAGIVTEPLSRLGARTLGIDAAERNVLVAADHA--RKQSADVAYRHAVPED 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           LV E  + D V+  EV+EHVAD + F   ++ L    G  VI T+NR+  ++  AII AE
Sbjct: 135 LVREGVRADIVLTLEVVEHVADLSRFVGDVAELVRPGGCLVIGTLNRTPISFVKAIIGAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +IL WLP+GTH W  F+ P EL  +L      + E      NPLT RWS+    S N++
Sbjct: 195 YILGWLPRGTHDWRRFVKPVELQALLAPHRFILLETVAVELNPLTMRWSIGGRPSTNYL 253


>gi|160900149|ref|YP_001565731.1| 3-demethylubiquinone-9 3-methyltransferase [Delftia acidovorans
           SPH-1]
 gi|151500322|gb|ABS12101.1| ubiquinone biosynthesis O-methyl-transferase [Delftia acidovorans]
 gi|160365733|gb|ABX37346.1| ubiquinone biosynthesis O-methyltransferase [Delftia acidovorans
           SPH-1]
          Length = 240

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 144/234 (61%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS++A  WWD E  +KPLH +NP RL +I +              P +G  ++DV
Sbjct: 12  AELEKFSSLAHRWWDPESEFKPLHQINPLRLDWIDAQ------------APLKGRRVLDV 59

Query: 168 GCGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGIL++ +AR GA  V GID   K +++A+LHA L+  T  I Y   + E+L EEQ 
Sbjct: 60  GCGGGILADSMARKGAREVVGIDLATKALRVAQLHA-LETGTPNIHYHEVSVERLAEEQP 118

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA    + + L    G    STINRS +A+  AI+AAE++L  
Sbjct: 119 GSFDVVTCMEMLEHVPDPASVVAACAELVKPGGWVFFSTINRSAKAFGLAIVAAEYLLKM 178

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH+++  + P EL +  ++A +D++   G  +NP+TGR+ LS D SVN++
Sbjct: 179 IPKGTHEYAKLIQPSELAMFARQAGLDLQASKGLQHNPITGRYWLSADTSVNYM 232


>gi|90407749|ref|ZP_01215927.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas sp. CNPT3]
 gi|90311109|gb|EAS39216.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas sp. CNPT3]
          Length = 246

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 143/232 (61%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFSA+A  WWD EG +KPLH LNPTRL +I   +   F K           ++VD+G
Sbjct: 21  EIEKFSAMATQWWDLEGDFKPLHMLNPTRLEYIEQGVDGLFAK-----------SVVDIG 69

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +A+ GA V GID    +++IARLHA L+  T T++Y  TTAE    E + +
Sbjct: 70  CGGGILAESMAKKGAKVIGIDMAHASLQIARLHA-LETAT-TLDYQKTTAEAFASEHKAQ 127

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++  ++    G+   STIN++M+AY   I+ AEH+L W+P
Sbjct: 128 FDVVTCMEMLEHVPDPASIIQACCSMLKPGGSVYFSTINKTMKAYLMMILGAEHVLRWVP 187

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH++  F+ P  L+  +   S+   ++ G  Y PL   + ++ ++SVN++
Sbjct: 188 KGTHEYKKFIRPSILLAAIDNTSLKCVDLCGVEYRPLHHDFHITKNVSVNYM 239


>gi|345876256|ref|ZP_08828030.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria weaveri LMG
           5135]
 gi|417957648|ref|ZP_12600568.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria weaveri
           ATCC 51223]
 gi|343966861|gb|EGV35113.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria weaveri LMG
           5135]
 gi|343967981|gb|EGV36219.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria weaveri
           ATCC 51223]
          Length = 242

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 139/234 (59%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+ KFS +A  WWD  G +KPLH +NP RL +I          D +      G  ++DV
Sbjct: 14  SEIDKFSQLAHKWWDETGEFKPLHEINPLRLGYI----------DQWGK--LAGKQVLDV 61

Query: 168 GCGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGILSE +A++GA  VTGID  EK++KIA+LHA LD     I Y C   E L  EQ 
Sbjct: 62  GCGGGILSESMAKLGAEQVTGIDMAEKSLKIAKLHA-LDQGVENIAYRCIRVEDLAAEQP 120

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA    + + L   +G    STINR+ ++Y  AII AE++L  
Sbjct: 121 GSFDVVTCMEMMEHVPDPAAIVAACAKLVKPDGMVFFSTINRNPKSYLHAIIGAEYLLKL 180

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +P GTH W  F+TP EL  + ++A +D+ +  G  YN LT  + L +++ VN++
Sbjct: 181 VPAGTHDWQKFITPAELARMCRQAGLDIVDTKGLDYNVLTKTYKLGNNVDVNYM 234


>gi|339238669|ref|XP_003380889.1| 3-demethylubiquinone-9 3-methyltransferase [Trichinella spiralis]
 gi|316976160|gb|EFV59496.1| 3-demethylubiquinone-9 3-methyltransferase [Trichinella spiralis]
          Length = 346

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 146/250 (58%), Gaps = 8/250 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP------YSA 156
           S++ + E+ +FS ++ TWWD +GP K LH+ N  R+ +I+ T+   F K        +  
Sbjct: 96  STVDNEEIKRFSNLSQTWWDEQGPMKLLHSFNSVRVPWIKDTVVLQFGKASSNINTFFGY 155

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
           +P  G+ I+DVGCG GI+SE LAR+GATV GIDA  + I +A+ H  L      ++Y   
Sbjct: 156 KPLNGVKILDVGCGAGIMSESLARLGATVVGIDANSEGIALAKEHQRLAGLGENLKYFVC 215

Query: 217 TAEKLVEE--QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             E + +   +  FDA++ASE+IEHV D   F      L  S G    +TIN+++ +   
Sbjct: 216 DVESVAQSVGESSFDAIVASEIIEHVNDQTLFINHCVDLVRSGGLLFFTTINKTIWSKIF 275

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI  AE++L  +PKG H+W+ F +P++L + L+R    V+ + G +YNPL  +W  + +I
Sbjct: 276 AIFVAENVLRLVPKGIHEWNKFFSPQDLQVNLERRGCSVRMINGLMYNPLQNKWYWTKNI 335

Query: 335 SVNFIAFGTK 344
           +VN+  +  K
Sbjct: 336 NVNYALYAVK 345


>gi|427826008|ref|ZP_18993070.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica Bbr77]
 gi|410591273|emb|CCN06371.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica Bbr77]
          Length = 257

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 17  MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 69

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 70  ----AGSLSGKRVLDVGCGGGILSESMAAAGAQVTGIDLAEKSLKIARLHG-LE-SGVKV 123

Query: 212 EYCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    ST+NR+ +
Sbjct: 124 DYRAVPVEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGGWVFFSTLNRNPK 183

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 184 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 243

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 244 SANTSVNYL 252


>gi|410904921|ref|XP_003965940.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Takifugu rubripes]
          Length = 331

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 154/257 (59%), Gaps = 5/257 (1%)

Query: 86  TAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL 145
           T +N    + + + S+ +++   E+ +F  ++  WWD +G +  LHA+N  R+  IR  L
Sbjct: 45  TQKNPEPCHLSLRQSSHATVDPDEVRRFQLLSSKWWDEQGEFAALHAMNDLRVPLIRDNL 104

Query: 146 CRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD 205
                K+ +  RP  GL I+DVGCGGG+L+EPL R+GA+V GID VE +I  A++HA  D
Sbjct: 105 LNMHPKN-HPGRPLSGLKILDVGCGGGLLTEPLGRLGASVLGIDPVEDSISTAQVHASYD 163

Query: 206 PET-STIEY-CCTTAEKLVEEQR--KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATV 261
           PE    + Y  CT  E   E +   +FDA++ASEV+EH+AD   F    + +    G+  
Sbjct: 164 PELRGRLRYQACTLEELSAEAEEAGRFDALVASEVVEHLADLETFAFCCNHMLKPGGSLF 223

Query: 262 ISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVY 321
           I+TIN++  +YA  I+ AE +L  +P GTH W  F++P EL  +L+     V+ + G +Y
Sbjct: 224 ITTINKTNLSYALGIVVAEQLLRIVPNGTHDWEKFISPVELERLLESNGFSVQTVQGMLY 283

Query: 322 NPLTGRWSLSDDISVNF 338
           NPL+G WS ++  ++N+
Sbjct: 284 NPLSGAWSWTNSTAINY 300


>gi|452124287|ref|ZP_21936871.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bordetella
           holmesii F627]
 gi|451923517|gb|EMD73658.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bordetella
           holmesii F627]
          Length = 253

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 108/261 (41%), Positives = 154/261 (59%), Gaps = 22/261 (8%)

Query: 80  VSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           +S  + TA + S+ N N        +  AEL KFSA+A  WWD E  +KPLHA+NP RL 
Sbjct: 9   LSAPMTTAAHSSRPNIN--------VDQAELDKFSALAARWWDPESEFKPLHAINPLRLE 60

Query: 140 FIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIAR 199
           +I++T           A    G  ++DVGCGGGILSE +A+ GA VTGID  EK++KIAR
Sbjct: 61  WIQAT-----------AGSLSGRRVLDVGCGGGILSEAMAQAGADVTGIDLAEKSLKIAR 109

Query: 200 LHADLDPETSTIEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEG 258
           LH  L+     ++Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G
Sbjct: 110 LHG-LE-SGVKVQYRAVPVEELATEQPAQYDVVTCMEMLEHVPDPASVVRACAALVKPGG 167

Query: 259 ATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
               ST+NR+ +++  AI+ AE++L  LP+GTH +  F+ P EL    ++A +    M G
Sbjct: 168 WVFFSTLNRNPKSFLFAIVGAEYLLRLLPRGTHSYEHFIKPSELATSARQAGLTPSGMRG 227

Query: 319 FVYNPLTGRWSLSDDISVNFI 339
             YNP+T  +SLS D SVN++
Sbjct: 228 MEYNPITQIYSLSADTSVNYL 248


>gi|39932517|sp|Q7WGT9.2|UBIG_BORBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
          Length = 241

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 1   MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 53

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 54  ----AGSLSGKRVLDVGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LESGVK-V 107

Query: 212 EYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    ST+NR+ +
Sbjct: 108 DYRAVPVEELATEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGGWVFFSTLNRNPK 167

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 168 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 227

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 228 SANTSVNYL 236


>gi|292492449|ref|YP_003527888.1| ubiquinone biosynthesis O-methyltransferase [Nitrosococcus
           halophilus Nc4]
 gi|291581044|gb|ADE15501.1| ubiquinone biosynthesis O-methyltransferase [Nitrosococcus
           halophilus Nc4]
          Length = 236

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKF  +A  WWD EG +K LH +NP RL +IR   C              G  ++DV
Sbjct: 11  GEIAKFEQLAHRWWDREGEFKALHDINPLRLEYIRKR-C-----------SLTGKRVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQR 226
           GCGGGIL+E LAR+GA  TGID  E  + +ARLHA L+     I+Y   + E+L E E  
Sbjct: 59  GCGGGILTEELARLGAITTGIDLSEAPLTVARLHA-LEGNLE-IDYRQISVEQLAETEAE 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA    +   L   +G    ST+NR+ +AY  AII AE+ L  L
Sbjct: 117 SFDVVTNLEMLEHVPDPASVIAACGRLLKPDGRVFFSTLNRTPKAYLFAIIGAEYTLQLL 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH +  F+ P EL    + A ++++++ G  YNPLT R+ L +DI+VN++A+GTK
Sbjct: 177 PKGTHDYQRFIQPAELEAWCRIAGLELQDLTGLHYNPLTHRYWLGNDINVNYLAYGTK 234


>gi|456063819|ref|YP_007502789.1| ubiquinone biosynthesis O-methyltransferase [beta proteobacterium
           CB]
 gi|455441116|gb|AGG34054.1| ubiquinone biosynthesis O-methyltransferase [beta proteobacterium
           CB]
          Length = 229

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/237 (42%), Positives = 148/237 (62%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  +E+AKFSA+A  WWD    +KPLHA+NP RL +I+S +              +G  
Sbjct: 2   NVDQSEIAKFSALAHRWWDPNSEFKPLHAINPLRLNWIKSFV------------DLKGKK 49

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGIL+E +A+ GA   GID  EK +K+A LHA L+   S ++Y   +AE L E
Sbjct: 50  VLDVGCGGGILAESIAQSGANTCGIDLSEKALKVAELHA-LEVGAS-LKYRSISAEALAE 107

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   ++D V   E++EHV DPA   ++ + L    G    ST+NR+ ++Y  AII AE+I
Sbjct: 108 EGPEQYDVVTCMEMLEHVPDPASVVRACAKLCRPGGTLFFSTLNRNPKSYLFAIIGAEYI 167

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LPKGTH+++ F+ P ELV   ++A +++  M G  YNP+T  +SL DD+ VN++
Sbjct: 168 LRLLPKGTHEYAKFIKPSELVAFTRQAGLEMIGMKGMSYNPITQVYSLGDDVDVNYM 224


>gi|33602448|ref|NP_890008.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica RB50]
 gi|33576887|emb|CAE33967.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica RB50]
          Length = 257

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 17  MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 69

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 70  ----AGSLSGKRVLDVGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LE-SGVKV 123

Query: 212 EYCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    ST+NR+ +
Sbjct: 124 DYRAVPVEELATEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGGWVFFSTLNRNPK 183

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 184 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 243

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 244 SANTSVNYL 252


>gi|58582325|ref|YP_201341.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas oryzae pv.
           oryzae KACC 10331]
 gi|84624205|ref|YP_451577.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188576192|ref|YP_001913121.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|75435088|sp|Q5GZB5.1|UBIG_XANOR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|109895927|sp|Q2P2C4.1|UBIG_XANOM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725570|sp|B2SHS9.1|UBIG_XANOP RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|58426919|gb|AAW75956.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas oryzae pv.
           oryzae KACC 10331]
 gi|84368145|dbj|BAE69303.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188520644|gb|ACD58589.1| ubiquinone biosynthesis O-methyltransferase [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 239

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 147/252 (58%), Gaps = 17/252 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+    A  +   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTQPASGNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLDYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH     E+S  ++Y
Sbjct: 53  ---DLAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHG---LESSVQVDY 106

Query: 214 CCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              + E L  EQ   FDAV   E++EHV DP    ++ + L    G   +ST+NR+  A+
Sbjct: 107 RVQSVEDLAAEQTGSFDAVTCMEMLEHVPDPTAIIRACARLLKPGGKLFLSTLNRTPAAF 166

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A A++ AE+I   LP+GTH +  F+ P EL   L+ A + +++++G +Y P   R  LS 
Sbjct: 167 ALAVVGAEYIARLLPRGTHHYKDFIKPAELAAWLRNAELQLEDVSGMLYEPWRNRARLSS 226

Query: 333 DISVNFIAFGTK 344
              VN++A+  K
Sbjct: 227 RTEVNYLAYAVK 238


>gi|365891616|ref|ZP_09430010.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. STM 3809]
 gi|365332414|emb|CCE02541.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. STM 3809]
          Length = 260

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 2/239 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
            PS++  AE+A+FS +A+ WW  +G +K +HA N  R+ ++   L     +DP++  P  
Sbjct: 17  GPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVGYLCDRLPALVGRDPHANLPLA 76

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL+I+DVGCG GI++EPL+R+GA   GIDA E+N+ +A  HA    + + + Y     E 
Sbjct: 77  GLDIIDVGCGAGIVTEPLSRLGADTLGIDAAERNVLVAADHARR--QGALVAYRHALPED 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L  E  + D V+  EV+EHVAD   F   ++ L    G  V+ T+NR+  ++  AII AE
Sbjct: 135 LAAEGEQADIVLTLEVVEHVADLGRFVGHVAGLVRPGGILVVGTLNRTATSFVKAIIGAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +IL WLP+GTH W  F+ P EL  +L        E  G   NPLT RW L    S N++
Sbjct: 195 YILGWLPRGTHDWRRFVKPAELQTLLAPYRFMPVETVGVELNPLTMRWRLGGRPSTNYL 253


>gi|410421043|ref|YP_006901492.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica MO149]
 gi|410472333|ref|YP_006895614.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           parapertussis Bpp5]
 gi|412338600|ref|YP_006967355.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica 253]
 gi|427815537|ref|ZP_18982601.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica 1289]
 gi|427818090|ref|ZP_18985153.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica D445]
 gi|408442443|emb|CCJ48983.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           parapertussis Bpp5]
 gi|408448338|emb|CCJ60019.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica MO149]
 gi|408768434|emb|CCJ53197.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica 253]
 gi|410566537|emb|CCN24100.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica 1289]
 gi|410569090|emb|CCN17175.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           bronchiseptica D445]
          Length = 257

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/249 (41%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 17  MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 69

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 70  ----AGSLSGKRVLDVGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LE-SGVKV 123

Query: 212 EYCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    ST+NR+ +
Sbjct: 124 DYRAVPVEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGGWVFFSTLNRNPK 183

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 184 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 243

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 244 SANTSVNYL 252


>gi|388567485|ref|ZP_10153918.1| 3-demethylubiquinone-9 3-methyltransferase [Hydrogenophaga sp. PBC]
 gi|388265298|gb|EIK90855.1| 3-demethylubiquinone-9 3-methyltransferase [Hydrogenophaga sp. PBC]
          Length = 235

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 147/238 (61%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +G ++PLH +NP R+A+I                   G  ++DV
Sbjct: 10  AELAKFSDLAHRWWDPDGEFRPLHQINPLRMAWIDGI------------AGLTGKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV-EEQR 226
           GCGGG+LS+ +AR+GA V GID   K +++A+LHA L+  T+ + Y   + E+L  EE  
Sbjct: 58  GCGGGVLSDGMARLGADVLGIDLASKALRVAQLHA-LEAGTTGVRYQEISVEELAREEPE 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP+   ++ +AL    G    ST+NR+ +A+  AI+ AE++L  L
Sbjct: 117 GFDVVTCMEMLEHVPDPSSVVRACAALVKPGGHVFFSTLNRNSKAFLFAILGAEYVLGLL 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           P+GTH+++ F+ P EL    + A +D++   G  YNPLT R+ LS D SVN++ FGT+
Sbjct: 177 PRGTHEYARFIRPSELAAHCRAAGLDLQHTRGMEYNPLTRRYWLSSDTSVNYL-FGTR 233


>gi|171463938|ref|YP_001798051.1| ubiquinone biosynthesis O-methyltransferase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171193476|gb|ACB44437.1| ubiquinone biosynthesis O-methyltransferase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 229

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 146/237 (61%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  +E+ KFSA+A  WWD    +KPLHA+NP RL +I+S +              EG  
Sbjct: 2   NVDQSEITKFSALAHRWWDPNSEFKPLHAINPLRLDWIKSFV------------NLEGRK 49

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           +VDVGCGGGIL+E +++ GA  TGID  EK +K+A LHA      + + Y   +AE L +
Sbjct: 50  VVDVGCGGGILAESISQSGAETTGIDLSEKALKVAELHAL--EVGANLTYRSISAEALAD 107

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EQ  ++D V  +E++EHV DPA   ++ + L    G    ST+NRS ++Y  AII AE+I
Sbjct: 108 EQSEQYDVVTCTEMLEHVPDPASIVRACAKLCKPGGTLFFSTLNRSPKSYLFAIIGAEYI 167

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LPKGTH+++ F+ P EL    + A +++  + G  YNPLT  +SLS+D+ VN++
Sbjct: 168 LKLLPKGTHEYAKFIKPSELAAFTRYAGLEMIGIKGLGYNPLTQVYSLSNDVDVNYM 224


>gi|325921157|ref|ZP_08183026.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas gardneri
           ATCC 19865]
 gi|325548351|gb|EGD19336.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas gardneri
           ATCC 19865]
          Length = 239

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 147/251 (58%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N   H+   +   +EL KF+A+A  WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NPNTHTTSGNFHQSELDKFAALATRWWDADGPQKPLHALNPVRLDYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 53  ---DLAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHS-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACASLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPAELAAWLRSAELQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|307545161|ref|YP_003897640.1| 3-demethylubiquinone-9 3-methyltransferase [Halomonas elongata DSM
           2581]
 gi|307217185|emb|CBV42455.1| 3-demethylubiquinone-9 3-methyltransferase [Halomonas elongata DSM
           2581]
          Length = 241

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 142/234 (60%), Gaps = 16/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKF A+AD WWD  G +KPLH +NP RL FI +      R+            ++DV
Sbjct: 14  AEIAKFEALADRWWDPSGEFKPLHDINPLRLDFIDARAGLAERR------------VIDV 61

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGILSE +A  G  VTGID  E  + +AR HA+       I+Y C + E++ E+   
Sbjct: 62  GCGGGILSESMAHRGGIVTGIDLGEAPLAVARRHAE--QSGLDIDYRCISVEEMAEQHPG 119

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DPA   ++ + L    G  V ST+NR  +AYA A+I AE++L  L
Sbjct: 120 EFDVVTCLEMLEHVPDPASVVRACARLAKPGGHLVFSTLNRHPKAYALAVIGAEYLLRML 179

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFI 339
           P+GTH ++ F+ P EL    + A ++V+E +G  Y PLT R+ LS +D+SVN++
Sbjct: 180 PRGTHDYARFIRPSELATWARDAGLEVREQSGLTYQPLTRRYRLSANDVSVNYL 233


>gi|429743551|ref|ZP_19277102.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
           taxon 020 str. F0370]
 gi|429165083|gb|EKY07160.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
           taxon 020 str. F0370]
          Length = 242

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++ H E+ KFS +A+ WWD EG +KPLH +NP RL +I          D ++     G  
Sbjct: 9   NVDHGEIDKFSRLAEKWWDTEGEFKPLHDINPFRLDYI----------DGFA--DLAGKK 56

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGILSE +A+ GA  V GID  EK+++ A  HA    +   + Y C + E L 
Sbjct: 57  VLDVGCGGGILSESIAKRGAVEVLGIDLAEKSLETAHYHAQAQ-QLDNLSYRCVSVEDLA 115

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E    +D V   E++EHV DPA   ++ + L   +G    STINR+ ++Y  AI+ AE+
Sbjct: 116 AETPHAYDVVTCMEMMEHVPDPASVIRACAKLAKPDGMVFFSTINRNAKSYLHAILGAEY 175

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ +PKGTH W  F+TP EL  + ++A +DV +  G  YNPL  R+ LSD + VN++
Sbjct: 176 ILNIVPKGTHDWQKFITPAELARMCRQAGLDVADSRGLGYNPLLQRYFLSDKVDVNYM 233


>gi|196014502|ref|XP_002117110.1| hypothetical protein TRIADDRAFT_61065 [Trichoplax adhaerens]
 gi|190580332|gb|EDV20416.1| hypothetical protein TRIADDRAFT_61065 [Trichoplax adhaerens]
          Length = 302

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/254 (41%), Positives = 141/254 (55%), Gaps = 10/254 (3%)

Query: 92  QLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLC----R 147
            +++ + ++  S+    E+ +FS IA  WW       PLHALN  R+  IR  L      
Sbjct: 36  NISSQRHNTNTSTANEEEIKQFSDIASKWWQWNNKNMPLHALNMVRVPLIRDALLGDEKS 95

Query: 148 HFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD-LDP 206
           H    P   RP  G  I+DVGCGGGIL EPLAR+GA VTGIDA  + I +A+ HA   D 
Sbjct: 96  HKIDQP---RPLSGYKILDVGCGGGILCEPLARLGAQVTGIDASSEIINVAKAHASKCDR 152

Query: 207 ETSTIEYCCTTAEKLV--EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIST 264
             + + Y CTT E+L   E  + FDAVIASEVIEHV +   F  S   L    G  +++T
Sbjct: 153 VAANVSYQCTTIEQLTTTENAQSFDAVIASEVIEHVDNVDLFVSSCCQLIKPGGKHIVTT 212

Query: 265 INRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPL 324
           INR+  +YA  II  E+I   +P G+H W  F+TP+EL   L+   ++V  + G  YNPL
Sbjct: 213 INRTPLSYAVMIIGGEYISRIIPAGSHDWKKFITPKELTKKLEEGGLNVDFIGGIFYNPL 272

Query: 325 TGRWSLSDDISVNF 338
           T      D+  VN+
Sbjct: 273 TNNAGWLDNTKVNY 286


>gi|452127685|ref|ZP_21940265.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bordetella
           holmesii H558]
 gi|451926554|gb|EMD76687.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Bordetella
           holmesii H558]
          Length = 241

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 152/257 (59%), Gaps = 22/257 (8%)

Query: 84  INTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRS 143
           + TA + S+ N N        +  AEL KFSA+A  WWD E  +KPLHA+NP RL +I++
Sbjct: 1   MTTAAHSSRPNIN--------VDQAELDKFSALAARWWDPESEFKPLHAINPLRLEWIQA 52

Query: 144 TLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD 203
           T           A    G  ++DVGCGGGILSE +A+ GA VTGID  EK++KIARLH  
Sbjct: 53  T-----------AGSLSGRRVLDVGCGGGILSEAMAQAGADVTGIDLAEKSLKIARLHG- 100

Query: 204 LDPETSTIEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVI 262
           L+     ++Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    
Sbjct: 101 LESGVK-VQYRAVPVEELATEQPAQYDVVTCMEMLEHVPDPASVVRACAALVKPGGWVFF 159

Query: 263 STINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYN 322
           ST+NR+ +++  AI+ AE++L  LP+GTH +  F+ P EL    ++A +    M G  YN
Sbjct: 160 STLNRNPKSFLFAIVGAEYLLRLLPRGTHSYEHFIKPSELATSARQAGLTPSGMRGMEYN 219

Query: 323 PLTGRWSLSDDISVNFI 339
           P+T  +SLS D SVN++
Sbjct: 220 PITQIYSLSADTSVNYL 236


>gi|241764513|ref|ZP_04762533.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax delafieldii
           2AN]
 gi|241366049|gb|EER60653.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax delafieldii
           2AN]
          Length = 236

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 143/241 (59%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P +   AELAKFS +A  WWD E  ++PLH +NP RL +I S                
Sbjct: 2   SEPVNADPAELAKFSELAHRWWDPESEFRPLHQINPLRLDWINSLAG------------L 49

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G  ++DVGCGGGILS+ +AR GA V GID   K +++A LHA L+ ET  +++   + E
Sbjct: 50  PGKRVLDVGCGGGILSDSMARKGAHVMGIDLSTKALRVASLHA-LETETPNLQFREVSVE 108

Query: 220 KLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L +EQ   FD V   E++EHV DP    ++ + L    G    STINR+ +A+A AI+ 
Sbjct: 109 ALADEQAASFDVVTCMEMLEHVPDPTSVVRACARLVKPGGWVFFSTINRNAKAFALAIVG 168

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L+ LP+GTH+++ F+ P EL    +   ++V    G  YNPLT R+ LSDD SVN+
Sbjct: 169 AEYVLNMLPRGTHEYAKFIRPSELAASCRSVGLEVSRTRGLEYNPLTRRYWLSDDTSVNY 228

Query: 339 I 339
           +
Sbjct: 229 L 229


>gi|33592099|ref|NP_879743.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           Tohama I]
 gi|384203401|ref|YP_005589140.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           CS]
 gi|408415241|ref|YP_006625948.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           18323]
 gi|39932510|sp|Q7VZG7.1|UBIG_BORPE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|33571743|emb|CAE41244.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           Tohama I]
 gi|332381515|gb|AEE66362.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           CS]
 gi|401777411|emb|CCJ62706.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella pertussis
           18323]
          Length = 241

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 150/249 (60%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 1   MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 53

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++D+GCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 54  ----AGSLSGKRVLDMGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LESGVK-V 107

Query: 212 EYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL    G    ST+NR+ +
Sbjct: 108 DYRAVPVEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGGWVFFSTLNRNPK 167

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 168 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELATSARQAGLEPTGMRGMEYNPITQVYSL 227

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 228 SANTSVNYL 236


>gi|114320071|ref|YP_741754.1| 3-demethylubiquinone-9 3-methyltransferase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|122312095|sp|Q0AA73.1|UBIG_ALHEH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|114226465|gb|ABI56264.1| 3-demethylubiquinone-9 3-methyltransferase [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 247

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/233 (42%), Positives = 141/233 (60%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A A  WWD +G  KPLH +NP RL ++   L              EG  I+DVG
Sbjct: 17  EVAKFDAAASRWWDPQGECKPLHDINPLRLDYVAQCLG-----------GLEGRRILDVG 65

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQRK 227
           CGGG+L+E +AR GA VTGID  +  +++ARLHA L+ E   + Y   T E+L + ++ +
Sbjct: 66  CGGGLLAEGMARRGAEVTGIDMSKAALQVARLHA-LEMEVE-VAYRQITVEELADSDEPR 123

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV   E++EHV DPA    + + L    G  + ST+NR+ ++Y  AI+ AE++L  LP
Sbjct: 124 FDAVTCLEMLEHVPDPASAVHACARLVKPGGHVIFSTLNRNPKSYLFAILGAEYLLQLLP 183

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH W  F+ P EL    + A + ++ M G  YNPL  R+ L+DD SVN++A
Sbjct: 184 KGTHDWQQFIRPSELDRWAREADLVLRSMKGLTYNPLNQRYKLTDDTSVNYLA 236


>gi|145588678|ref|YP_001155275.1| ubiquinone biosynthesis O-methyltransferase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145047084|gb|ABP33711.1| 3-demethylubiquinone-9 3-methyltransferase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 229

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 147/237 (62%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  +E+AKFSA+A  WWD    +KPLHA+NP RL +I++ +              +G  
Sbjct: 2   NVDQSEIAKFSALAHRWWDPNSEFKPLHAINPLRLNWIKTFI------------DLDGKK 49

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGIL+E +++ GA  TGID  +K +K+A LHA      + + Y   +AE L E
Sbjct: 50  VLDVGCGGGILAESISQSGADTTGIDLSDKALKVAELHAL--EVGANLTYRSISAEALAE 107

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EQ  ++D V   E++EHV DPA   ++ + L    G    ST+NRS ++Y  AII AE+I
Sbjct: 108 EQPEQYDVVTCMEMLEHVPDPASVVRACATLCKPGGTLFFSTLNRSPKSYLFAIIGAEYI 167

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LPKGTH+++ F+ P ELV   + A +++  M G  YNP+T  +SL++D+ VN++
Sbjct: 168 LKLLPKGTHEYTKFIKPSELVAFTRHAGLELLGMKGLSYNPITQVYSLNNDLDVNYM 224


>gi|421484158|ref|ZP_15931730.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           piechaudii HLE]
 gi|400197865|gb|EJO30829.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           piechaudii HLE]
          Length = 242

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 141/234 (60%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KFSA+A  WWD E  +KPLHA+NP RL +I+             A    G  ++D
Sbjct: 17  QAELDKFSALASRWWDPESEFKPLHAINPLRLEWIQEC-----------AGSLAGKKVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +AR GA VTGID  +K++K+ARLH  L+     +EY     E+L  EQ 
Sbjct: 66  VGCGGGILSESMARGGADVTGIDLADKSLKVARLHG-LESGVK-VEYRKVPVEELAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ S L    G    ST+NR+ +A+  AI+ AE++L  
Sbjct: 124 GQYDVVTCMEMLEHVPDPASIVRACSTLVKPGGWVFFSTLNRNAKAFVFAIVGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH +  F+ P EL    + A+++   M G  YNP+T  +SLS D SVN++
Sbjct: 184 LPRGTHSYDQFIKPSELSAAARAANLEPISMRGMEYNPITQIYSLSSDTSVNYL 237


>gi|21231707|ref|NP_637624.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66768167|ref|YP_242929.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|188991304|ref|YP_001903314.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. campestris str. B100]
 gi|24418723|sp|Q8P8H2.1|UBIG_XANCP RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|81305858|sp|Q4UVL4.1|UBIG_XANC8 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725569|sp|B0RS27.1|UBIG_XANCB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|21113408|gb|AAM41548.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66573499|gb|AAY48909.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|167733064|emb|CAP51262.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           campestris pv. campestris]
          Length = 239

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 147/252 (58%), Gaps = 17/252 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N    S  S+    EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + +         
Sbjct: 2   NPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAARVA-------- 53

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+    E+S  ++Y
Sbjct: 54  ----LPGARVLDVGCGGGLLSEAMARLGAQVTAIDLAPELVKVARLHSL---ESSVQVDY 106

Query: 214 CCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              + E L  EQ   FDAV   E++EHV DP    ++ ++L    G   +ST+NR+  A+
Sbjct: 107 RVQSVEDLAAEQPGSFDAVTCMEMLEHVPDPLAIIRACASLLKPGGTLFLSTLNRTPAAF 166

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
           A A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS 
Sbjct: 167 ALAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSS 226

Query: 333 DISVNFIAFGTK 344
              VN++A   K
Sbjct: 227 RTEVNYLACAVK 238


>gi|118602614|ref|YP_903829.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567553|gb|ABL02358.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 234

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 143/247 (57%), Gaps = 19/247 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF+A+A  WWD    +KPLH +NP RL +I+                 +G 
Sbjct: 2   SNIDFNEVDKFAALASRWWDKNSEFKPLHDINPLRLNYIKEK----------CGCSLKGK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH---ADLDPETSTIEYCCTTAE 219
            I+DVGCGGGIL+E LA  GA VTGID  E  +++A+LH   +DL+     ++Y     E
Sbjct: 52  KILDVGCGGGILAESLALEGAIVTGIDMAEAGLEVAKLHLIESDLE-----VDYQKIPVE 106

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           K  E+   KFD +   E++EHV DP+   K+ S L    G    STINR++++Y  AII 
Sbjct: 107 KFTEQYTEKFDVITCLEMLEHVPDPSSIVKACSKLVKPSGQVFFSTINRNIKSYLFAIIG 166

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL  LPKGTH W+ F+ P E+    + +S+ +K M G  YNPL   +   +D+SVN+
Sbjct: 167 AEYILKLLPKGTHDWNKFIQPSEMDEWARDSSLSLKSMIGITYNPLKKTYKFENDVSVNY 226

Query: 339 IAFGTKN 345
           +++  K 
Sbjct: 227 LSYYQKQ 233


>gi|254524753|ref|ZP_05136808.1| 3-demethylubiquinone-9 3-O-methyltransferase [Stenotrophomonas sp.
           SKA14]
 gi|219722344|gb|EED40869.1| 3-demethylubiquinone-9 3-O-methyltransferase [Stenotrophomonas sp.
           SKA14]
          Length = 238

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 143/245 (58%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLKYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   +T++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGATVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAVIEACKRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A++ + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREANMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|359784440|ref|ZP_09287612.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           GFAJ-1]
 gi|359298400|gb|EHK62616.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           GFAJ-1]
          Length = 247

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 20/257 (7%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRK 151
            ++  H    ++  AE+AKF A+A  WWD +  +KPLH +NP RL FI  RS L      
Sbjct: 6   QDSTAHRYQGNVDAAEVAKFEALASRWWDPQSEFKPLHDINPLRLDFIDARSGLA----- 60

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
                    G  ++DVGCGGGILSE +A  GA VTGID  E  + +ARLHA+       I
Sbjct: 61  ---------GKRVLDVGCGGGILSESMAHRGAKVTGIDLGEAPLGVARLHAE--ASGVEI 109

Query: 212 EYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y   + E L +EQ  +FD +   E++EHV DPA   ++ S L    G    ST+NR+ +
Sbjct: 110 DYRNISVEALADEQPGQFDIITCMEMLEHVPDPASVIRACSQLVRPGGYVFFSTLNRTPK 169

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           +YA AI+ AE++L  LP+GTH ++ F+ P E+    + + ++V+E  G  YNPLT R+ L
Sbjct: 170 SYAFAILGAEYLLRLLPRGTHDYAKFIRPSEMAAWSRISGLEVREQTGLTYNPLTRRYRL 229

Query: 331 -SDDISVNFIAFGTKNS 346
            ++D+SVN++ +  K S
Sbjct: 230 VANDVSVNYMMYCRKVS 246


>gi|288941710|ref|YP_003443950.1| ubiquinone biosynthesis O-methyltransferase [Allochromatium vinosum
           DSM 180]
 gi|288897082|gb|ADC62918.1| ubiquinone biosynthesis O-methyltransferase [Allochromatium vinosum
           DSM 180]
          Length = 250

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/248 (39%), Positives = 141/248 (56%), Gaps = 3/248 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H +  S+   E+A F  +A  WWD EGP+ PLH LN  R+ +IR  LC    +DP + RP
Sbjct: 5   HLSAPSIDPEEVAYFERLAHRWWDTEGPFWPLHRLNAFRVDYIRRHLCAALDRDPNAERP 64

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F  L I+D+GCGGGILSE +AR+GA VTGID  EKN+++AR+HA        I+Y   + 
Sbjct: 65  FADLRILDIGCGGGILSESMARLGAQVTGIDITEKNLQVARMHAQW--SELEIDYRLASV 122

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L E++  FD V+  EV+EHV    +F    + L    G  V+S+INR+  A+  AI+ 
Sbjct: 123 EQLAEDEAGFDVVLNMEVVEHVEHLPDFLADCARLAQPGGLMVVSSINRTPAAWVMAILG 182

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+IL WLP+GTH +   + P E+   L      + E  G   NP    +  +    VN+
Sbjct: 183 AEYILRWLPRGTHHYRKLVRPAEVAHGLGAGYRLIHE-TGVRVNPFNRAFGYTRWKGVNY 241

Query: 339 IAFGTKNS 346
           +    + +
Sbjct: 242 MMVWQRRA 249


>gi|384419079|ref|YP_005628439.1| ubiquinone biosynthesis O-methyltransferase [Xanthomonas oryzae pv.
           oryzicola BLS256]
 gi|353461992|gb|AEQ96271.1| ubiquinone biosynthesis O-methyltransferase [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 239

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 146/251 (58%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+    A  +   +EL KF+A+A+ WWDA+GP KPLHALNP RL ++ + L         
Sbjct: 2   NSNTQPASGNFHQSELDKFAALANRWWDADGPQKPLHALNPVRLDYVSARL--------- 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH  L+     ++Y 
Sbjct: 53  ---DLAGARVLDVGCGGGLLSESMARLGAQVTAIDLAPELVKVARLHG-LESGVQ-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP    ++ + L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPTAIIRACARLLKPGGKLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LP+GTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPRGTHHYKDFIKPAELAAWLRNAELQLEDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A+  K
Sbjct: 228 TEVNYLAYAVK 238


>gi|331005936|ref|ZP_08329282.1| 3-demethylubiquinone-9 3-methyltransferase [gamma proteobacterium
           IMCC1989]
 gi|330420231|gb|EGG94551.1| 3-demethylubiquinone-9 3-methyltransferase [gamma proteobacterium
           IMCC1989]
          Length = 237

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/240 (44%), Positives = 144/240 (60%), Gaps = 16/240 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    +KPLH +NP R  FI                P   LN++DVG
Sbjct: 11  EIAKFEALAKRWWDKTSEFKPLHDINPLRANFIDER------------SPVAELNVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE LA+ GA VTGID  E  + +ARLH+ L+     I Y   TAE L EEQ  +
Sbjct: 59  CGGGILSESLAQRGANVTGIDMGEAPLSVARLHS-LESGVK-INYRKITAEALAEEQPEQ 116

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP++   + + L    G    STINR+ ++YA AII AE++L  LP
Sbjct: 117 YDIVTCLEMLEHVPDPSQVIAACAQLVKPGGDVYFSTINRNPKSYAFAIIGAEYVLQLLP 176

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKNS 346
           KGTH++S F+ P EL    + A +  +E+ G  YNPLT ++ L+ +D+SVN++   TK S
Sbjct: 177 KGTHEYSKFIKPSELAQWSRDAGLSWQEITGMTYNPLTKKYRLNPNDVSVNYLVHVTKAS 236


>gi|218890637|ref|YP_002439501.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           LESB58]
 gi|386057868|ref|YP_005974390.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           M18]
 gi|421152915|ref|ZP_15612483.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 14886]
 gi|226725554|sp|B7V9J5.1|UBIG_PSEA8 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|218770860|emb|CAW26625.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           LESB58]
 gi|347304174|gb|AEO74288.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           M18]
 gi|404524593|gb|EKA34920.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 14886]
          Length = 232

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 148/240 (61%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGGILSE +A+ GA+VTGID  E  + +ARLH  L+   + ++Y   TAE+
Sbjct: 48  GKKVLDIGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLH-QLESGVA-VDYRQITAEQ 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|66815829|ref|XP_641931.1| 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase [Dictyostelium
           discoideum AX4]
 gi|74997163|sp|Q54XD0.1|COQ3_DICDI RecName: Full=Hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase;
           Short=DHHB-MT; Short=DHHB-MTase; AltName:
           Full=3-demethylubiquinone-n 3-methyltransferase;
           AltName: Full=Dihydroxyhexaprenylbenzoate
           methyltransferase; Flags: Precursor
 gi|60469958|gb|EAL67940.1| 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase [Dictyostelium
           discoideum AX4]
          Length = 321

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 147/252 (58%), Gaps = 13/252 (5%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH---FRKDPYSARPFEG 161
           L+  E+  F+  +  WW+ EG  KPLH +NP R+ +I   L  +     K+P    P EG
Sbjct: 70  LRQDEIDFFNQQSSDWWNPEGTMKPLHRMNPFRVKYICDRLKIYNEKVSKNPIHL-PLEG 128

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDP------ETSTIEYC 214
           LN++DVGCG G+L+E L+R+GA+ V G+DA + NI +A  HA  D       +  ++ Y 
Sbjct: 129 LNVIDVGCGVGLLTESLSRLGASKVVGLDAAKNNILMAISHASFDQKLNENIQNKSLNYL 188

Query: 215 CTTAEKL--VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
            +T E    +E  ++FDAV + EVIEHV +P +F   LS +    G+  ISTIN++  +Y
Sbjct: 189 ESTIENFYNIENDQQFDAVCSLEVIEHVDNPKQFIDYLSKIVKPGGSIFISTINKTFLSY 248

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
            +AI+ AE+I   +P GTH W  F+ P++L       +  + ++ G VYNPLT  W  ++
Sbjct: 249 ISAILGAEYIFRMVPVGTHHWDQFIKPKDLESYFDSNNCQITDLKGLVYNPLTCEWDFTN 308

Query: 333 DISVNFIAFGTK 344
           D++VN++    K
Sbjct: 309 DLNVNYLLHAIK 320


>gi|104780665|ref|YP_607163.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas entomophila
           L48]
 gi|166234770|sp|Q1IDA6.1|UBIG_PSEE4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|95109652|emb|CAK14353.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas entomophila
           L48]
          Length = 232

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVD-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + LS+D+ VN++
Sbjct: 168 ILKMLPRGTHDFKKFIRPSELGAWSRVAGLEVKDIIGLTYNPLTKHYKLSNDVDVNYM 225


>gi|194366513|ref|YP_002029123.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia R551-3]
 gi|194349317|gb|ACF52440.1| ubiquinone biosynthesis O-methyltransferase [Stenotrophomonas
           maltophilia R551-3]
          Length = 238

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/245 (40%), Positives = 142/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLQYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   +T++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGATVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACMRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|15598367|ref|NP_251861.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           PAO1]
 gi|418585273|ref|ZP_13149327.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa MPAO1/P1]
 gi|418591677|ref|ZP_13155570.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa MPAO1/P2]
 gi|421517701|ref|ZP_15964375.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa PAO579]
 gi|17369012|sp|Q9HZ63.1|UBIG_PSEAE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|9949288|gb|AAG06559.1|AE004741_4 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           PAO1]
 gi|375044693|gb|EHS37287.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa MPAO1/P1]
 gi|375049487|gb|EHS41981.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa MPAO1/P2]
 gi|404347183|gb|EJZ73532.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa PAO579]
          Length = 232

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 148/240 (61%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGGILSE +A+ GA+VTGID  E  + +ARLH  L+   + ++Y   TAE+
Sbjct: 48  GKKVLDIGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLH-QLESGVA-VDYRQITAEQ 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|49082032|gb|AAT50416.1| PA3171, partial [synthetic construct]
          Length = 233

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 148/240 (61%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGGILSE +A+ GA+VTGID  E  + +ARLH  L+   + ++Y   TAE+
Sbjct: 48  GKKVLDIGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLH-QLESGVA-VDYRQITAEQ 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|157377629|ref|YP_001476229.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|157320003|gb|ABV39101.1| 3-demethylubiquinone-9 3-O-methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 266

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 159/277 (57%), Gaps = 18/277 (6%)

Query: 75  IDSASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALN 134
           +D + +SPS+N          N++ SA  + +  E+AKF+A+A+ W D +G +K + A N
Sbjct: 2   LDKSHLSPSLN----------NERKSALDTER--EIAKFNALANEWRDPKGKFKHVLAFN 49

Query: 135 PTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKN 194
            TRL  I   +  HF +D     PF  L+++D+GCG G+L EPLA  GA V+GIDA   N
Sbjct: 50  QTRLIAIEDAIAYHFERDLNQDVPFSDLSLLDIGCGAGLLCEPLAWQGARVSGIDASSHN 109

Query: 195 IKIARLHADLDPETSTIEYC-----CTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCK 248
           I +AR HA+ +  T    +C      TT EK  + +  ++D V+ +EVIEHV D      
Sbjct: 110 IALARQHANSNSVTVDYRHCLAESLLTTGEKERITDTNQYDVVLNTEVIEHVGDQEALIH 169

Query: 249 SLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQR 308
           +   L    G  +++T+NR++++Y   II AE+++ +LP GTH W  F+TP+E+  ++  
Sbjct: 170 TCCQLLKPGGLLIMATLNRTIKSYLIGIIGAEYLMRYLPIGTHDWRFFVTPKEMDAMITP 229

Query: 309 ASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
             +   +  G  +NPLT +W +++   VN++ +  KN
Sbjct: 230 HGLRTVKAEGMSFNPLTKKWKVTNSTDVNYLLYAIKN 266


>gi|395005342|ref|ZP_10389226.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax sp. CF316]
 gi|394316725|gb|EJE53435.1| ubiquinone biosynthesis O-methyltransferase [Acidovorax sp. CF316]
          Length = 242

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/246 (41%), Positives = 149/246 (60%), Gaps = 15/246 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P +   AELAKFSA+A  WWD +  ++PLH +NP RL +I            ++     G
Sbjct: 10  PVNADPAELAKFSALAHRWWDRDSEFRPLHQINPLRLDWI------------HALSGLGG 57

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
             ++DVGCGGGIL++ +AR GA VTGID   K +++A+LHA L+  T  ++Y   + E L
Sbjct: 58  KRVLDVGCGGGILADSMARKGADVTGIDLATKALRVAQLHA-LEAGTKGVQYREISVEAL 116

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             EQ   FD V   E++EHV DPA   K+ S L    G    STI+R+ +A+  AI+ AE
Sbjct: 117 AAEQPASFDVVTCMEMLEHVPDPASVVKACSELVKPGGWVFFSTIHRNAKAFMLAIVGAE 176

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L+ LP+GTH+++  + P EL    + A +DV +  G  YNPLT R+ LS+D SVN++ 
Sbjct: 177 YVLNMLPRGTHEYAKMIRPSELASHCRSAGLDVLQTRGLEYNPLTKRYWLSNDTSVNYM- 235

Query: 341 FGTKNS 346
           F T+ +
Sbjct: 236 FATQRA 241


>gi|152989438|ref|YP_001347339.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           PA7]
 gi|452877439|ref|ZP_21954725.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa VRFPA01]
 gi|166234769|sp|A6V2Q4.1|UBIG_PSEA7 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|150964596|gb|ABR86621.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           aeruginosa PA7]
 gi|452185821|gb|EME12839.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa VRFPA01]
          Length = 232

 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 148/240 (61%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A+ GA+VTGID  E  + +ARLH  L+   + ++Y   TAE+
Sbjct: 48  GKTVLDVGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLH-QLESGVA-VDYRQITAEQ 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILQLLPRGTHDFRKFIRPSELGAWSRDAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|424864167|ref|ZP_18288071.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86B]
 gi|400759596|gb|EJP73777.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86B]
          Length = 229

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 145/237 (61%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A+ WWD  G +KPLH +NP R+ +I+S +              +GL ++DVG
Sbjct: 7   EVKKFSELAEKWWDNSGEFKPLHIINPVRVDYIQSKI------------NVQGLEVLDVG 54

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-DLDPETSTIEYCCTTAEKLVEEQRK 227
           CGGGILSE L  +GA VTGIDA   ++++AR+HA D   + + +E   T  E L    +K
Sbjct: 55  CGGGILSEGLFDLGAKVTGIDAAGPSLEVARIHAKDYGKDITYLE--ITAEELLATSDKK 112

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   EV+EHV DP    K+  +L    G   +STIN++ R++ TAI+ AE++ + LP
Sbjct: 113 YDVVCCLEVLEHVPDPKALVKACISLLKPNGQLFLSTINKNPRSWITAIVGAEYLFNILP 172

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH++S F+ P EL   ++    + KE  G  YNP+T + +L++D+ VN++   +K
Sbjct: 173 KGTHEFSKFIKPSELAKFIRDGGGNFKESKGMFYNPITHKANLNNDLGVNYLIHASK 229


>gi|298369777|ref|ZP_06981094.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298282334|gb|EFI23822.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 238

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 143/256 (55%), Gaps = 27/256 (10%)

Query: 86  TAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL 145
           TAEN   ++++            E+AKFS IAD WWD  G +KPLH +NP RL +I    
Sbjct: 2   TAENQRNVDDD------------EIAKFSQIADKWWDKNGEFKPLHDINPLRLNYIDRLA 49

Query: 146 CRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADL 204
                       P  G  ++DVGCGGGILSE +A+ GA  VTGID  EK+++ A+ HA  
Sbjct: 50  ------------PLAGKRVLDVGCGGGILSESMAKRGAAHVTGIDMAEKSLQTAQTHAAA 97

Query: 205 DPETSTIEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIS 263
             +   I Y C   E L  E    FD V   E++EHV DPA   K+ + L   +G    S
Sbjct: 98  Q-KVGNIAYRCVRVEDLAAEAPHSFDVVTCMEMMEHVPDPAAIVKACAKLVKPDGTVFFS 156

Query: 264 TINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNP 323
           TINR+ ++Y   I+ AE++L+++PKGTH W  F+TP EL  + ++  +DV +  G  YN 
Sbjct: 157 TINRNPKSYLHLIVGAEYVLNFVPKGTHDWHKFITPAELARMCRQVGLDVADTKGLKYNL 216

Query: 324 LTGRWSLSDDISVNFI 339
           LT ++SL     VN++
Sbjct: 217 LTRQFSLDSRTDVNYM 232


>gi|325192214|emb|CCA26665.1| 3demethylubiquinone9 3methyltransferase putative [Albugo laibachii
           Nc14]
          Length = 266

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 142/245 (57%), Gaps = 4/245 (1%)

Query: 103 SSLKHAELAKFSAIADTWW--DAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           SS+   E+AKF+ +AD WW  +       LH +N  R+ +IR     HF++   S +P  
Sbjct: 16  SSVIDREVAKFNTVADNWWKPNVSSSVNLLHQMNRVRVRYIRDHSIHHFKETNVS-KPLH 74

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
            L+I D+GCGGGILSE L R+G ++  +D   +NIK A+ HA  DPETS I+Y C  A+ 
Sbjct: 75  NLSIADIGCGGGILSEALCRLGGSIVAVDPGSENIKAAQKHASFDPETSRIDYRCGVADD 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L+ ++ K D V + EV+EHV DP  F +SL  L    G   +STINR++ +Y  AI AAE
Sbjct: 135 LISDKVKCDIVCSMEVVEHVPDPDVFVESLLKLVKPGGLLFLSTINRTIMSYLLAIGAAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI-SVNFI 339
           ++   LP GTH W+ F+TP+E+   + +    V ++ G + +P+   W L      VN+I
Sbjct: 195 YVFRLLPPGTHDWNKFVTPQEMEQFISKHDAKVVDIDGIIGSPILNDWRLHSTCHQVNYI 254

Query: 340 AFGTK 344
               K
Sbjct: 255 LCAAK 259


>gi|107102701|ref|ZP_01366619.1| hypothetical protein PaerPA_01003767 [Pseudomonas aeruginosa PACS2]
 gi|116051160|ref|YP_790009.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254236133|ref|ZP_04929456.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           C3719]
 gi|254241859|ref|ZP_04935181.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           2192]
 gi|296388345|ref|ZP_06877820.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           PAb1]
 gi|313108483|ref|ZP_07794487.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           39016]
 gi|355640998|ref|ZP_09051985.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas sp.
           2_1_26]
 gi|386067189|ref|YP_005982493.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|392983104|ref|YP_006481691.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa DK2]
 gi|416863899|ref|ZP_11915387.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa 138244]
 gi|416882247|ref|ZP_11921828.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa 152504]
 gi|419752506|ref|ZP_14278913.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa PADK2_CF510]
 gi|420138986|ref|ZP_14646857.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           CIG1]
 gi|421159445|ref|ZP_15618580.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|421166689|ref|ZP_15624924.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|421173637|ref|ZP_15631377.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           CI27]
 gi|421179675|ref|ZP_15637255.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           E2]
 gi|424942541|ref|ZP_18358304.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           NCMG1179]
 gi|451987916|ref|ZP_21936067.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           18A]
 gi|122260295|sp|Q02PX7.1|UBIG_PSEAB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|115586381|gb|ABJ12396.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168064|gb|EAZ53575.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           C3719]
 gi|126195237|gb|EAZ59300.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           2192]
 gi|310880989|gb|EFQ39583.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           39016]
 gi|334835210|gb|EGM14103.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa 138244]
 gi|334835264|gb|EGM14152.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa 152504]
 gi|346058987|dbj|GAA18870.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           NCMG1179]
 gi|348035748|dbj|BAK91108.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           NCGM2.S1]
 gi|354831024|gb|EHF15053.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas sp.
           2_1_26]
 gi|384401046|gb|EIE47402.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa PADK2_CF510]
 gi|392318609|gb|AFM63989.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa DK2]
 gi|403248263|gb|EJY61848.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           CIG1]
 gi|404535566|gb|EKA45255.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           CI27]
 gi|404537408|gb|EKA47010.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 700888]
 gi|404546787|gb|EKA55826.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           E2]
 gi|404547157|gb|EKA56171.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           ATCC 25324]
 gi|451754463|emb|CCQ88590.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas aeruginosa
           18A]
 gi|453043068|gb|EME90802.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           aeruginosa PA21_ST175]
          Length = 232

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGGILSE +A+ GA VTGID  E  + +ARLH  L+   + ++Y   TAE+
Sbjct: 48  GKKVLDIGCGGGILSEAMAQRGANVTGIDMGEAPLAVARLH-QLESGVA-VDYRQITAEQ 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DPA   ++   L    G   +STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPASVIRACHRLVKPGGQVFLSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILQLLPRGTHDFRKFIRPSELGAWSREAGLEVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|350560847|ref|ZP_08929686.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio
           thiocyanoxidans ARh 4]
 gi|349780954|gb|EGZ35262.1| ubiquinone biosynthesis O-methyltransferase [Thioalkalivibrio
           thiocyanoxidans ARh 4]
          Length = 251

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 139/240 (57%), Gaps = 5/240 (2%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SAPS +   E+A++  +A  WWD +GP+ PLH LN  R  +I   L R   +D  +A P 
Sbjct: 8   SAPS-VDPEEVARYQRLAANWWDPQGPFWPLHVLNRVRSGWIVEQLARELERDASAAEPL 66

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            GL ++DVGCGGGILSE +AR GA V GID   +NI IAR HA  + +  +I Y     E
Sbjct: 67  RGLRMLDVGCGGGILSESMARHGAEVLGIDVAPRNIAIARDHA--EAQGLSIRYRPIALE 124

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L  ++  FD V+  EVIEHV DP  F +   +    EG  V++T+NR++ ++   II A
Sbjct: 125 HL--DENGFDVVLNLEVIEHVVDPQAFLRECLSRVRPEGFLVLATLNRTLASFVAGIIGA 182

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LP+GTHQW  F+ P+EL   LQ A   +   +G   NPLT R  L     VN++
Sbjct: 183 EYLFRLLPRGTHQWRRFVRPKELTDPLQAAGCRIVARSGVGVNPLTRRMRLIRYEGVNYM 242


>gi|315126543|ref|YP_004068546.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315015057|gb|ADT68395.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 236

 Score =  191 bits (484), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ +AE+AKF AIA+ WWD EG +KPLH +NP RL FI       F K+          
Sbjct: 5   QNVDNAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIADKTKGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS  +ARMGA VTGID  ++ + IA+LH+    ETS  +EY    AE+ 
Sbjct: 55  -TLDVGCGGGILSHSMARMGANVTGIDMGQEPLTIAKLHS---LETSVPVEYIKVPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +E   +FD +   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 ADEHPERFDVITCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  AG  YNPL+ +++++DD+SVN++
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASAGLSYNPLSKQYTMNDDVSVNYM 229


>gi|170717839|ref|YP_001784899.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus somnus
           2336]
 gi|189037622|sp|B0UUV6.1|UBIG_HAES2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|168825968|gb|ACA31339.1| ubiquinone biosynthesis O-methyltransferase [Haemophilus somnus
           2336]
          Length = 238

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 141/243 (58%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            +L   EL KF  +A +WWD  G +KP+H LNPTRL +I+             A      
Sbjct: 2   QNLDPQELEKFEKMAKSWWDPNGDFKPIHQLNPTRLQYIQQ-----------QANGLTEK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID     +++ARLHA    +   I+Y   T E+ +
Sbjct: 51  KVLDVGCGGGILSEAMAKQGAIVTGIDMTVAPLEVARLHAK--EQGLVIDYQQITVEEFL 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           ++Q      KFD +   E++EHV DP    +S  AL    G    STINR+ +A+A  ++
Sbjct: 109 QKQTALYAEKFDVITCMEMLEHVPDPLSIIQSCRALLKPNGVLFFSTINRTFKAWALVVL 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE+IL  LPKGTH +  F+ P EL+    +A++  K + G+ YN LTG++ L+ D+S N
Sbjct: 169 GAEYILKMLPKGTHDYDKFIKPAELLHWTDQANLVCKNICGYHYNLLTGKFWLNQDVSAN 228

Query: 338 FIA 340
           ++A
Sbjct: 229 YMA 231


>gi|162147692|ref|YP_001602153.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542317|ref|YP_002274546.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786269|emb|CAP55851.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529994|gb|ACI49931.1| ubiquinone biosynthesis O-methyltransferase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 253

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 151/256 (58%), Gaps = 13/256 (5%)

Query: 89  NHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH 148
           N +  ++   H A  S+   E+A+FSA+AD WWD  GP +PLHA+N  RL + R    RH
Sbjct: 2   NVNDSSSRAAHPAGHSVAPDEIARFSALADRWWDPSGPMRPLHAMNGLRLDWAR----RH 57

Query: 149 FRKDPYSARPFE-GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DL 204
               P    P E    ++D+GCG G+ SE LARMG  VTG+DA +  I  AR H     L
Sbjct: 58  L---PAPGTPGEPATRLLDIGCGAGLASEGLARMGYDVTGLDASDAAIAAARAHLADHPL 114

Query: 205 DPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIST 264
            P+  ++ Y   +AE+L  E  +F A+ A EVIEHV DPA F + L+ +    G  ++ST
Sbjct: 115 PPDGGSLAYRVGSAEELQAEGARFAAITALEVIEHVTDPAAFLRVLADMVAPGGVIIVST 174

Query: 265 INRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPL 324
           +NR++R+ ATA I AE+IL  LP GTH+W  F+TP EL     +A + V ++AG V  P 
Sbjct: 175 LNRTLRSLATAKIGAEYILRLLPAGTHEWRKFITPAELGAFASQAGLRVSDIAGMV--PA 232

Query: 325 TGRWSLSDDISVNFIA 340
            G W  S D+ VN+IA
Sbjct: 233 LGGWRESHDLGVNYIA 248


>gi|352103167|ref|ZP_08959695.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           HAL1]
 gi|350599572|gb|EHA15657.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           HAL1]
          Length = 247

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 102/252 (40%), Positives = 149/252 (59%), Gaps = 20/252 (7%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSA 156
           H    ++  AE+AKF A+A  WWD +G +KPLH +NP RL FI  R+ L           
Sbjct: 11  HHYQDNVDAAEVAKFEALASRWWDPQGEFKPLHDINPLRLDFIDARAGLA---------- 60

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
               G  ++DVGCGGGILSE +A  GATVTGID  E  + +ARLHA+       ++Y   
Sbjct: 61  ----GKKVLDVGCGGGILSESMAHRGATVTGIDLGEAPLAVARLHAE--ERGVKVDYQHI 114

Query: 217 TAEKL-VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           + E + V++   +D V   E++EHV DPA   ++ SAL    G    ST+NR+ ++YA A
Sbjct: 115 SVEAMAVQKPGFYDVVTCMEMLEHVPDPASVIRACSALVRPGGYVFFSTLNRTAKSYAFA 174

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDI 334
           I+ AE++L  LP+GTH ++ F+ P E+    + + ++V+E  G  YNPLT  + L S D+
Sbjct: 175 ILGAEYVLKLLPRGTHNYAKFIRPSEMAAWSRHSGLEVREQTGLTYNPLTRHYRLVSHDV 234

Query: 335 SVNFIAFGTKNS 346
           SVN++ +  K S
Sbjct: 235 SVNYMMYCRKVS 246


>gi|77360363|ref|YP_339938.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|109895906|sp|Q3ILA5.1|UBIG_PSEHT RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|76875274|emb|CAI86495.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 236

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 145/239 (60%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTGGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   +EY    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVEYIKVPAEQY 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             E   +FD V   E++EHV DPA    +++ L         ST+N++ +AY  AII AE
Sbjct: 111 ASEHPARFDVVTCMEMLEHVPDPASIIHAVAELAKPGADVFFSTLNKTPKAYLYAIIGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  AG  YNPL+ ++SL+ D+SVN+I
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASAGLSYNPLSKQYSLNTDVSVNYI 229


>gi|326794745|ref|YP_004312565.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas
           mediterranea MMB-1]
 gi|326545509|gb|ADZ90729.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas
           mediterranea MMB-1]
          Length = 241

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 141/248 (56%), Gaps = 16/248 (6%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H++  ++   E+AKF A+A  WWD    +KPLH +NP R+ +I                P
Sbjct: 5   HTSSLNVDQEEIAKFEALASKWWDKNSEFKPLHEINPLRVNYINER------------SP 52

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            +G  ++DVGCGGGILSE +A MGA V GID  E  + +A LHA        + Y   TA
Sbjct: 53  LDGKKVIDVGCGGGILSESMALMGANVRGIDMGEAPLGVASLHAK--ESGVDVAYEQITA 110

Query: 219 EKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++ E +  ++D V   E++EHV DPA   K+   L    G    STINR+ +AY  AI+
Sbjct: 111 EEIAERDSEQYDIVTCLEMLEHVPDPASVIKACMKLCKPGGHVYFSTINRNPKAYLFAIV 170

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE+IL  LPKGTH ++ F+ P EL    + A +DV+ M G  YNPLT  + L+D D+SV
Sbjct: 171 GAEYILGLLPKGTHDYAKFIQPAELNNFSRNAGLDVQHMTGLTYNPLTKVYKLNDRDVSV 230

Query: 337 NFIAFGTK 344
           N++    K
Sbjct: 231 NYMMHTQK 238


>gi|392539072|ref|ZP_10286209.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Pseudoalteromonas marina mano4]
          Length = 236

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD EG +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKIPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            EE   +FD V   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 AEEHPERFDVVTCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  +G  YNP + +++L++D+SVN+I
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASSGLSYNPFSKQYTLNNDVSVNYI 229


>gi|359445437|ref|ZP_09235173.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20439]
 gi|358040714|dbj|GAA71422.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20439]
          Length = 236

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ +AE+AKF AIA+ WWD EG +KPLH +NP RL FI       F K+          
Sbjct: 5   QNVDNAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIADKTKGLFNKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS  +ARMGA VTGID  ++ + +A+LH+    ETS  +EY    AE+ 
Sbjct: 55  -TLDVGCGGGILSHSMARMGANVTGIDMGQEPLTVAKLHS---LETSVPVEYIKVPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +E   +FD +   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 ADEHPERFDVITCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  AG  YNPL+ +++++DD+SVN++
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASAGLSYNPLSKQYTMNDDVSVNYM 229


>gi|293604167|ref|ZP_06686575.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
           piechaudii ATCC 43553]
 gi|292817392|gb|EFF76465.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
           piechaudii ATCC 43553]
          Length = 242

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 141/234 (60%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KFSA+A  WWD E  +KPLHA+NP RL +I+             A    G  ++D
Sbjct: 17  QAELDKFSALASRWWDPESEFKPLHAINPLRLEWIQEC-----------AGNLAGKKVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +AR GA VTGID  +K++K+ARLH  L+     +EY     E+L  EQ 
Sbjct: 66  VGCGGGILSEAMARGGAEVTGIDLADKSLKVARLHG-LESGVK-VEYRKVPVEELAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ S L    G    ST+NR+ +++  AI+ AE++L  
Sbjct: 124 AQYDVVTCMEMLEHVPDPASIVRACSTLVKPGGWVFFSTLNRNAKSFLFAIVGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH +  F+ P EL    + A+++   M G  YNP+T  +SLS D SVN++
Sbjct: 184 LPRGTHSYDQFIKPSELSAAARAANLEPVSMRGMEYNPITQIYSLSSDTSVNYL 237


>gi|67458806|ref|YP_246430.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia felis
           URRWXCal2]
 gi|75536745|sp|Q4UME7.1|UBIG_RICFE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|67004339|gb|AAY61265.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia felis
           URRWXCal2]
          Length = 244

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 11/245 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+            L
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITSHYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A        + Y  +T E+L 
Sbjct: 55  EILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETASTYAK--ENGVKVNYLQSTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE++
Sbjct: 112 QSDKLYDVVICLEVIEHVENVQQFILNLVGHIKPNGMAIISTINRTKKAYVLGIIVAEYV 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAF 341
           L W+PK TH +S FL P E+  +L    I++KE+ G VY+P    W LS+DI VN F+  
Sbjct: 172 LGWVPKNTHDYSKFLKPSEIYEMLTDTDIEIKELKGLVYDPAKNEWKLSNDIDVNYFMCL 231

Query: 342 GTKNS 346
           G K +
Sbjct: 232 GRKTN 236


>gi|332288379|ref|YP_004419231.1| 3-demethylubiquinone-9 3-methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330431275|gb|AEC16334.1| 3-demethylubiquinone-9 3-methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 247

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 145/253 (57%), Gaps = 23/253 (9%)

Query: 91  SQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
            QLN+  K     ++   EL KF+ +A +WWD  G +KP+H LNP RL +I         
Sbjct: 2   QQLNSENK-----NIDQQELDKFAKMAASWWDLNGDFKPIHQLNPLRLNYILQ------- 49

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD-----LD 205
                +    G  ++DVGCGGGILSE +A+ GA VTGID   + + +A+ HA      +D
Sbjct: 50  ----HSNGLNGKKVLDVGCGGGILSESMAKSGANVTGIDMSPQPLAVAKQHAQDNNLIID 105

Query: 206 PETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTI 265
            + STIE      ++L  E  KFD +   E++EHV DP    +S   L   +G   +STI
Sbjct: 106 YQQSTIEDFLQQHQQLQAE--KFDVITCMEMLEHVPDPLSIIRSCRQLLKPDGVLFMSTI 163

Query: 266 NRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLT 325
           NR+++A+A  +I AE+IL  LP+GTH +  F+ P EL+    +  +  +++ G+ YNPLT
Sbjct: 164 NRTLKAWALVVIGAEYILKMLPQGTHDYEKFIKPAELLAYCDQVGLTCQQLKGYHYNPLT 223

Query: 326 GRWSLSDDISVNF 338
           G + L+DD+S N+
Sbjct: 224 GNFWLNDDVSANY 236


>gi|333895380|ref|YP_004469255.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas sp. SN2]
 gi|332995398|gb|AEF05453.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas sp. SN2]
          Length = 269

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 144/261 (55%), Gaps = 22/261 (8%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           + SAP +    E+ +F A+A++WWD  G YK     N  RL+ I S +  HF K   + R
Sbjct: 6   QKSAPINFSKQEIDRFDALAESWWDPNGNYKTALDFNRARLSVIESQITSHFMKSEQAQR 65

Query: 158 -------------------PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIA 198
                              PF GL+IVD+GCGGG++SEPLA  GA VTGIDA   +I++A
Sbjct: 66  VVQKVSKTNFQANPMDKTKPFSGLSIVDIGCGGGLISEPLALKGADVTGIDASAMSIEVA 125

Query: 199 RLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEG 258
           + HA        + Y    +  LV ++R+FD VI +EV+EHV D A+  K  ++L    G
Sbjct: 126 KRHAK--QSNVEVNYMHGLSSDLVSQERQFDIVINAEVVEHVPDQAQLIKECASLVKPGG 183

Query: 259 ATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
             V++T+NR++++Y  AI+ AE+++ +LP GTH W  F+ P EL   +      +    G
Sbjct: 184 LLVLATLNRTIKSYIIAIVGAEYVMRYLPVGTHDWQKFVKPTELNHWVGEG-FTLNHETG 242

Query: 319 FVYNPLTGRWSLSDDISVNFI 339
              NP T  W L+  +SVN++
Sbjct: 243 MALNPFTKVWKLTPSLSVNYL 263


>gi|359451679|ref|ZP_09241077.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20480]
 gi|358042501|dbj|GAA77326.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20480]
          Length = 236

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD EG +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVDVDYIKIPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            EE   +FD V   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 AEEHPERFDVVTCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  +G  YNP + +++L++D+SVN+I
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASSGLSYNPFSKQYTLNNDVSVNYI 229


>gi|77165759|ref|YP_344284.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosococcus oceani
           ATCC 19707]
 gi|254433569|ref|ZP_05047077.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosococcus oceani
           AFC27]
 gi|109895675|sp|Q3J8U2.1|UBIG_NITOC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|76884073|gb|ABA58754.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosococcus oceani
           ATCC 19707]
 gi|207089902|gb|EDZ67173.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosococcus oceani
           AFC27]
          Length = 236

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 137/237 (57%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A  WWD EG +KPLH +NP RL +IR+                 G  I+DVG
Sbjct: 12  EIAKFEQLAHRWWDQEGEFKPLHDINPLRLEYIRNHAS------------LAGKRILDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E L R+GA VTGID  +  + +ARLHA    E   I+Y   + E+L E +   
Sbjct: 60  CGGGILTEELTRLGAKVTGIDLGKAPLSVARLHAL--EEGLEIDYQQISVERLAETKAGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD +   E++EHV  PA    +   L    G    ST+NR+ +AY  A+I AE+ L  LP
Sbjct: 118 FDVITNLEMLEHVPYPASVVAACGQLLKPGGKVFFSTLNRTPKAYLFAVIGAEYALRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +  F+ P EL    ++  I+++ + G  YNPLT R+ L  DI+VN++A+G K
Sbjct: 178 KGTHDYHRFIRPAELETWCRKGGIELQNLTGLHYNPLTQRYRLGKDINVNYLAYGAK 234


>gi|339018173|ref|ZP_08644314.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter tropicalis
           NBRC 101654]
 gi|338752732|dbj|GAA07618.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter tropicalis
           NBRC 101654]
          Length = 246

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 145/243 (59%), Gaps = 12/243 (4%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A SS+   E+A+F A+AD WWD  GP +PLHA+N  R+++     CRHF   P   R   
Sbjct: 8   AASSVSPEEIARFGALADKWWDPSGPMRPLHAMNELRISWA----CRHF---PLRGRTSR 60

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTIEYCCTT 217
            + ++D+GCG G+ SE LAR G  V G+DA    I  AR H +  P    +  + Y   +
Sbjct: 61  RVRVLDIGCGAGLASEALARAGHDVLGLDASPNGIAAARTHLENHPLPDGSGPLTYRVGS 120

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE+LV E  +FDAV+A E+IEHV DP  F   L+ L    G  ++ST+NR++++ A   I
Sbjct: 121 AEELVAENARFDAVVALEIIEHVTDPERFMHMLADLAEPGGIVIVSTMNRTLKSLAIGKI 180

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LP GTH+W  F+TP EL    + A + ++ +AG V + LTG W  S ++ VN
Sbjct: 181 GAEYLLRLLPVGTHEWRKFITPAELGRYGRSAGLSIQAIAGMVPS-LTG-WKESRNLDVN 238

Query: 338 FIA 340
           +IA
Sbjct: 239 YIA 241


>gi|351732284|ref|ZP_08949975.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acidovorax
           radicis N35]
          Length = 236

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 148/240 (61%), Gaps = 15/240 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I +  C              G  ++DV
Sbjct: 10  AELAKFSELAHRWWDPESEFRPLHQINPLRLDWINAQ-CN-----------LSGKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +A  GA VTGID   K +++A+LHA L+ +T+ I+Y   + E L +EQ  
Sbjct: 58  GCGGGILADSMAWKGADVTGIDLASKALRVAQLHA-LEAQTTHIQYREVSVEALAKEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    STI+R+ +A+  AI+ AE++L+ L
Sbjct: 117 SFDVVTCMEMLEHVPDPASVVRACAELVKPGGWVFFSTIHRNAKAFMLAIVGAEYVLNML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           P+GTH+++  + P EL    + A ++V+   G  YNPLT R+ LSDD SVN++ F T+ +
Sbjct: 177 PRGTHEYAKMIRPSELAASCRGAGLNVQSTRGLEYNPLTRRYWLSDDTSVNYL-FATRRT 235


>gi|56460469|ref|YP_155750.1| 3-demethylubiquinone-9 3-methyltransferase [Idiomarina loihiensis
           L2TR]
 gi|81363193|sp|Q5QZ53.1|UBIG_IDILO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|56179479|gb|AAV82201.1| Demethylubiquinone methylase [Idiomarina loihiensis L2TR]
          Length = 243

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 145/248 (58%), Gaps = 14/248 (5%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +  ++  S   ++   E+AKFSA+A  WWD +G +KPLH +NP RL FI +     F   
Sbjct: 1   MTTSRSKSEQKNVDPEEIAKFSALASRWWDPDGEFKPLHKINPVRLGFIENHTDGLF--- 57

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                   G  ++DVGCGGG+LSE +A  GA VTG+D  E+++K+ARLHA L+     I+
Sbjct: 58  --------GKKVLDVGCGGGLLSEAMAERGAQVTGVDLAEQSLKVARLHA-LE-SGRQID 107

Query: 213 YCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y C   E L ++Q   FD V   E++EHV DP    K+ +      G    ST+NR++++
Sbjct: 108 YQCIAIETLADQQPASFDVVTCLEMLEHVPDPKAIVKACAKALKPGGKIFFSTLNRNVKS 167

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +   I+AAEH+L W+PKGTHQ   F+ P EL+ +   A+++   + G ++NPL G     
Sbjct: 168 WLLGIVAAEHVLGWVPKGTHQHQRFIKPSELLRMTDAAALEDIAINGLIFNPLKGFVLSE 227

Query: 332 DDISVNFI 339
            D+ VN+I
Sbjct: 228 KDVDVNYI 235


>gi|254492115|ref|ZP_05105290.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga
           thiooxidans DMS010]
 gi|224462667|gb|EEF78941.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga
           thiooxydans DMS010]
          Length = 235

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 102/235 (43%), Positives = 141/235 (60%), Gaps = 21/235 (8%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A +WWD EG  KPLH +NP R  +I +  C+            +  N++DVG
Sbjct: 12  EVAKFEALAASWWDLEGQSKPLHEINPHRTGYI-AQRCK-----------LDNANVIDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAEKLVEEQ 225
           CGGGILSE LA+ GA VTGID  E  + IA+LHA    LD     I Y  +TAE +    
Sbjct: 60  CGGGILSEALAKNGAKVTGIDMGEMPLDIAKLHAMESGLD-----IHYEQSTAETMASRH 114

Query: 226 R-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
             +FDAV   E++EHV DPA   ++ + L    G    ST+NR  +AY  A++ AE++++
Sbjct: 115 TAEFDAVTCLEMLEHVPDPAAIIQACADLVKPGGDVFFSTLNRHPKAYLLAVVGAEYVMN 174

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            LPKGTH +  F+ P EL    ++A + VK + G  YNPLT ++SL DD+ VN+I
Sbjct: 175 MLPKGTHDYKRFIRPAELASWCRQAGLQVKNITGISYNPLTRQFSLGDDVKVNYI 229


>gi|399910984|ref|ZP_10779298.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           KM-1]
          Length = 239

 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 16/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKF A+A  WWD +  +KPLH +NP RL FI +                 G  
Sbjct: 8   NVDQGEIAKFEALASRWWDPQSEFKPLHDINPLRLDFIDARC------------GLAGRK 55

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGIL+E +A  GA VTGID  E  + +ARLHA        +EY   +AE +  
Sbjct: 56  VLDVGCGGGILAEAMAHRGAKVTGIDMGEAPLAVARLHAQ--ESGVDVEYRQASAEAMAA 113

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EQ  ++D V   E++EHV DP    ++ ++L    G    STINR+ +AYA AI+ AE++
Sbjct: 114 EQPGEYDVVTCLEMLEHVPDPGSVIRACTSLVKPGGQVFFSTINRNPKAYALAIVGAEYL 173

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDISVNFI 339
           L  LP+GTH++  F+ P EL    +   + V+E +G VYNPLT R+ L S+D+SVN++
Sbjct: 174 LQMLPRGTHEYRKFIRPAELAGWCREHGLSVREQSGLVYNPLTRRYRLSSNDVSVNYL 231


>gi|269213961|ref|ZP_05983248.2| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria cinerea
           ATCC 14685]
 gi|269145021|gb|EEZ71439.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria cinerea
           ATCC 14685]
          Length = 243

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I          D ++     G  ++DVG
Sbjct: 17  EIAKFSRIADKWWDKSGEFKPLHDINPLRLDYI----------DGHA--DLRGKRVLDVG 64

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQR 226
           CGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L E E  
Sbjct: 65  CGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLAEAEPH 123

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++
Sbjct: 124 SFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFV 183

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 184 PKGTHDWKKFIAPAELARMCRQAGLDVVDTKGMTYHVLSQTYALCDSTDVNYM 236


>gi|91787679|ref|YP_548631.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas sp. JS666]
 gi|91696904|gb|ABE43733.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas sp. JS666]
          Length = 235

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 141/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I                P +G  ++DV
Sbjct: 10  AELAKFSDLAHRWWDTESEFRPLHQINPLRLDWIEGQ------------APLKGQRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +K+A+LHA L+ +T  +EY   +AE L  EQ  
Sbjct: 58  GCGGGILADAMARKGADVLGIDLATKALKVAQLHA-LEAQTEGVEYREISAEALAAEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV +PA   K+ +AL    G    STINR+ +A+  AI+ AE++L+ L
Sbjct: 117 SFDVVTCMEMLEHVPNPASVVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNLL 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++  + P EL    +   + +++  G  YNPLT  + LS D SVN++
Sbjct: 177 PRGTHEYAKLIKPSELAGYCRTNGLTLQQTRGMEYNPLTQHYWLSADTSVNYL 229


>gi|85711598|ref|ZP_01042655.1| 3-demethylubiquinone-9 3-methyltransferase [Idiomarina baltica
           OS145]
 gi|85694458|gb|EAQ32399.1| 3-demethylubiquinone-9 3-methyltransferase [Idiomarina baltica
           OS145]
          Length = 244

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 137/233 (58%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFSA+A  WWD EG +KPLH +NP RL FI   +   F K           ++VDVG
Sbjct: 18  EIEKFSALASRWWDTEGEFKPLHQINPLRLTFIEQQVGGLFNK-----------HVVDVG 66

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGG+L+E +A  GA VTGID    ++++ARLHA L+ + S I+Y   +AE    E   +
Sbjct: 67  CGGGLLTEGMASRGARVTGIDLAHDSLEVARLHA-LESQLS-IDYQQVSAENFAAENSAQ 124

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    ++  +    G  + ST+NR+++++   I+AAEH+L W+P
Sbjct: 125 FDVVTCLEMLEHVPDPAAIVSAVCEMVKPGGYAIFSTLNRNVKSWLLGIVAAEHVLRWVP 184

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTHQ   F+ P EL+ +     +   +M G VY PL G      D+ VN+I 
Sbjct: 185 KGTHQHQRFIKPSELLRMTDAHGLQAMKMNGIVYKPLQGFMLDEHDVDVNYIV 237


>gi|410943217|ref|ZP_11374958.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Gluconobacter
           frateurii NBRC 101659]
          Length = 251

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/248 (41%), Positives = 144/248 (58%), Gaps = 15/248 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG- 161
           SS+  +E+A FSA+A  WW+  GP  PLHA+NP R  ++ S           S +P EG 
Sbjct: 14  SSVSDSEIAHFSALAKDWWNPRGPMAPLHAMNPLRTDWVASRTT--------SLKPSEGK 65

Query: 162 -LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTT 217
            L+++D+GCG G+ SE  A++G    G+DA    I+ AR H     L P  + + Y   +
Sbjct: 66  CLSLLDIGCGAGLASEAFAKLGFETLGLDASPDGIEAARAHQANYPLPPSAAPLTYRNGS 125

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE LVEE  +FD V A EVIEHV DP +F   L+ALT   G   +ST++R+ R++A A +
Sbjct: 126 AEDLVEEGVEFDVVSALEVIEHVNDPQDFLHMLAALTRPGGMVAVSTMSRTPRSFAMAKL 185

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE+IL  LP GTH W  F+ PEEL  + + A + + ++AG  Y P   RW  + D  VN
Sbjct: 186 GAEYILRMLPVGTHDWKKFIKPEELAAMARNAGLRMTDIAGMSYLP--PRWRTTRDTGVN 243

Query: 338 FIAFGTKN 345
           +IA  TK 
Sbjct: 244 YIAMFTKG 251


>gi|398804888|ref|ZP_10563872.1| ubiquinone biosynthesis O-methyltransferase [Polaromonas sp. CF318]
 gi|398092816|gb|EJL83221.1| ubiquinone biosynthesis O-methyltransferase [Polaromonas sp. CF318]
          Length = 235

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I   +            P +GL ++DV
Sbjct: 10  AELAKFSDLAHRWWDTESEFRPLHQINPLRLGWIDGQV------------PLKGLRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR G+ V GID   K +K+A+LHA L+ +T  ++Y   +AE L  E+  
Sbjct: 58  GCGGGILADSMARKGSEVLGIDLATKALKVAQLHA-LEAQTEGVQYREISAEALAAERPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP+   K+ +AL    G    STINR+ +A+  AI+ AE++L+ L
Sbjct: 117 SFDVVTCMEMLEHVPDPSSIVKACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYVLNML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++  + P EL    + + + + +  G  YNPLT  + LS D SVN++
Sbjct: 177 PRGTHEYAKLVKPSELAGYCRTSGLSLLQTRGMEYNPLTRHYWLSADTSVNYL 229


>gi|187477843|ref|YP_785867.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella avium 197N]
 gi|109895664|sp|Q2L2T5.1|UBIG_BORA1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|115422429|emb|CAJ48954.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella avium 197N]
          Length = 241

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 144/237 (60%), Gaps = 14/237 (5%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  AEL KFSA+A  WWD E  +KPLHA+NP RL +I+             A   +G  
Sbjct: 13  NVDQAELDKFSALAARWWDPESEFKPLHAINPLRLEWIQEL-----------AGSLQGRR 61

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE +A+ GA VTGID  EK++KIARLH  L+     +EY     E+L  
Sbjct: 62  VLDVGCGGGILSEAMAQAGADVTGIDLAEKSLKIARLHG-LESGVK-VEYRAVPVEELAT 119

Query: 224 EQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           EQ  ++D V   E++EHV DP    ++ +AL    G    ST+NR+ +++  AII AE++
Sbjct: 120 EQAGQYDIVTCMEMLEHVPDPNSVVRACAALVKPGGWVFFSTLNRNPKSFLFAIIGAEYV 179

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LP+GTH +  F+ P EL    ++A ++   M G  YNP+T  +SLS + SVN++
Sbjct: 180 LRLLPRGTHSYEHFIKPSELAASARQAGLEPSGMRGMEYNPITQIYSLSGNTSVNYL 236


>gi|456736754|gb|EMF61480.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia EPM1]
          Length = 238

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLKYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGAKVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGRLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|339060956|ref|ZP_08648954.1| 3-demethylubiquinone-9 3-methyltransferase [gamma proteobacterium
           IMCC2047]
 gi|330720261|gb|EGG98624.1| 3-demethylubiquinone-9 3-methyltransferase [gamma proteobacterium
           IMCC2047]
          Length = 249

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/248 (41%), Positives = 148/248 (59%), Gaps = 20/248 (8%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP RL +I                   G 
Sbjct: 14  SNVDDAEVAKFEALASRWWDKESEFKPLHEINPLRLNYIDEIAG------------LAGK 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID   K IKIA+LHA L+     I Y   +AE L 
Sbjct: 62  TVLDVGCGGGILSESMAKRGATVTGIDMGGKPIKIAKLHA-LEAGIK-INYQKISAEDLA 119

Query: 223 EE-----QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
            +     ++KFD +   E++EHV DPA    + + +    G   +STINR+ +AY  AII
Sbjct: 120 AQIEQNSEQKFDVITCLEMLEHVPDPASIINACTRMLKPGGHLFLSTINRNPKAYLMAII 179

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE+I++ LP+GTH+++ F+ P EL   ++ A ++VK   G  YNPLT R+ L++ D+ V
Sbjct: 180 GAEYIMNMLPRGTHEYAKFIRPAELSRWVRAAGLEVKGSTGMTYNPLTKRYKLTERDLDV 239

Query: 337 NFIAFGTK 344
           N++    K
Sbjct: 240 NYLMHTVK 247


>gi|190575195|ref|YP_001973040.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia K279a]
 gi|190013117|emb|CAQ46749.1| putative 3-demethylubiquinone-9 3-methyltransferase
           [Stenotrophomonas maltophilia K279a]
          Length = 238

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLKYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGAKVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRTATAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|39932512|sp|Q7W5Z6.2|UBIG_BORPA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
          Length = 241

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 149/249 (59%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 1   MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 53

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 54  ----AGSLSGKRVLDVGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LESGVK-V 107

Query: 212 EYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL         ST+NR+ +
Sbjct: 108 DYRAVPVEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGRWVFFSTLNRNPK 167

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 168 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 227

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 228 SANTSVNYL 236


>gi|386719259|ref|YP_006185585.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia D457]
 gi|384078821|emb|CCH13414.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia D457]
          Length = 238

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLQYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGAQVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADLQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|419955724|ref|ZP_14471847.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri TS44]
 gi|387967424|gb|EIK51726.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri TS44]
          Length = 232

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I          D + A    G 
Sbjct: 2   SNVDNAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWI----------DEHVA--LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGAQVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEDMA 107

Query: 223 EE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +   +FD V   E++EHV DPA   ++  AL    G    STINR+ +AYA AII AE+
Sbjct: 108 AQCPEQFDVVACLEMLEHVPDPASVIRACCALVKPGGQVFFSTINRNPKAYALAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  LP+GTH +  F+ P EL    + A + VKE+ GF YNPLT  + LS D+ VN++
Sbjct: 168 LLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKEIIGFTYNPLTKFYKLSADVDVNYM 225


>gi|344208161|ref|YP_004793302.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia JV3]
 gi|343779523|gb|AEM52076.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia JV3]
          Length = 238

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLQYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGAKVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|91205271|ref|YP_537626.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia bellii
           RML369-C]
 gi|157827384|ref|YP_001496448.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia bellii OSU
           85-389]
 gi|109895917|sp|Q1RJC7.1|UBIG_RICBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|166201216|sp|A8GX11.1|UBIG_RICB8 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|91068815|gb|ABE04537.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia bellii
           RML369-C]
 gi|157802688|gb|ABV79411.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia bellii OSU
           85-389]
          Length = 240

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/244 (40%), Positives = 141/244 (57%), Gaps = 11/244 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+ +WW+ +G +  LH +NP RL +I   +  H+            L
Sbjct: 2   SSVNKNELEKFEKISHSWWNKDGEFGILHRINPIRLNYIIEKIKSHYN-------DISDL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++  L   G  VT IDA++ NI  A  +A        + Y  +T E+L 
Sbjct: 55  EILDVGCGGGLIATNLTMQGFNVTAIDALQSNIDTALAYAT--ENNIKVNYLKSTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E  +++D VI  EVIEHV +  EF  +L      +G  +ISTINR+ +AY   IIAAE+I
Sbjct: 112 ENDKQYDVVICLEVIEHVENVQEFMLNLVKRIKPKGIAIISTINRTKKAYLLGIIAAEYI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAF 341
           L W+PK TH +S FL P E+  +L+  +I+++E+ G VYN    +W LS DDI VN+  +
Sbjct: 172 LGWVPKNTHDYSKFLKPSEIYEMLENTNIEIEELKGLVYNMAEDKWVLSDDDIDVNYFVY 231

Query: 342 GTKN 345
             KN
Sbjct: 232 LKKN 235


>gi|423016373|ref|ZP_17007094.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           xylosoxidans AXX-A]
 gi|338780627|gb|EGP45032.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           xylosoxidans AXX-A]
          Length = 242

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/234 (43%), Positives = 140/234 (59%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF A+A  WWD E  +KPLHA+NP RL +I+            S     G  ++D
Sbjct: 17  QAELDKFGALASRWWDPESEFKPLHAINPLRLEWIQE-----------SVGSLAGKKVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +AR GA VTGID  +K++KIA+LH  L+     +EY     E L  EQ 
Sbjct: 66  VGCGGGILSEAMARAGAEVTGIDLADKSLKIAKLHG-LESGVK-VEYRKVPVEALAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ +ALT   G    ST+NR+ +A+  AII AE++L  
Sbjct: 124 GQYDVVTCMEMLEHVPDPASIVRACAALTKPGGWVFFSTLNRNPKAFLFAIIGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH +  F+ P EL    + A ++   M G  YNP+T  +SL+ D SVN++
Sbjct: 184 LPRGTHTYDMFIKPSELASSARGAGLEPVGMRGMEYNPITQIYSLTSDTSVNYL 237


>gi|152980426|ref|YP_001354368.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp.
           Marseille]
 gi|151280503|gb|ABR88913.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp.
           Marseille]
          Length = 231

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/237 (42%), Positives = 138/237 (58%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD    ++PLH +NP RL +I                P  G N+VD+G
Sbjct: 7   ELKKFSDLAHQWWDPTSEFRPLHEINPLRLGWINGR------------APLAGKNVVDIG 54

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQRK 227
           CGGGIL+E +A+ GA VTGID  EK +K+A LH+ L+     + Y    AE L E E  +
Sbjct: 55  CGGGILAESMAKSGANVTGIDLSEKALKVADLHS-LESGVQ-VRYELIAAEDLAEREAGR 112

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + + L    G    STINR+ +AY  A+I AE++L  LP
Sbjct: 113 FDVVTCMEMLEHVPDPAAIVAACAKLAKPGGKVFFSTINRNPKAYLHAVIGAEYLLRLLP 172

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH ++ F+TP EL    + A +D+  + G  +NPLT  +SL+ D SVN++   TK
Sbjct: 173 KGTHDYAKFITPAELSRYAREAGLDIDALKGMGFNPLTKIYSLNQDTSVNYLVACTK 229


>gi|340777649|ref|ZP_08697592.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acetobacter
           aceti NBRC 14818]
          Length = 264

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 149/254 (58%), Gaps = 10/254 (3%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
             + +++ +S+   E+A+FSAIA  WWD  GP +PLHA+NP R+ +I     RH    P 
Sbjct: 18  TGQANASAASVSPEEIARFSAIAREWWDPTGPMRPLHAMNPLRIGWID----RHL---PL 70

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTI 211
            +R    L ++D+GCG G+ SE LA+ G  V G+DA  + I  AR H + +P    + ++
Sbjct: 71  RSRKQSPLTVLDLGCGAGLASEALAKAGHDVLGMDASAEGIAAARKHLEDNPLPAGSGSL 130

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
            Y   +AE LV E   FDAV+A E+IEHV DP  F   L+ L    G   +ST+NR+ RA
Sbjct: 131 AYRVGSAEALVAEGVTFDAVVALEIIEHVTDPTAFMSMLANLVKPGGWVFVSTMNRTARA 190

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           +A A + AE+I+  LP GTH W  F+TP EL    ++A + ++++AG   + L   W  S
Sbjct: 191 FAFAKVGAEYIMRLLPVGTHDWRKFVTPSELGHYGRQAGLSLEDIAGMTPSLLGDSWRES 250

Query: 332 DDISVNFIAFGTKN 345
            D+ VN+IA  T+ 
Sbjct: 251 RDLGVNYIAAFTRG 264


>gi|390949172|ref|YP_006412931.1| 3-demethylubiquinone-9 3-methyltransferase [Thiocystis violascens
           DSM 198]
 gi|390425741|gb|AFL72806.1| 3-demethylubiquinone-9 3-methyltransferase [Thiocystis violascens
           DSM 198]
          Length = 250

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 143/242 (59%), Gaps = 5/242 (2%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H    S+   E+A F  +A  WWD EGP+ PLH LN  R+ +IR  L     +D    RP
Sbjct: 5   HLTAPSIDPEEVAYFERLAHRWWDTEGPFWPLHRLNAFRVDYIRERLAAAMGRDADLERP 64

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           FEGL ++D+GCGGGILSE LAR+GA VTGI+  EKN+++A +HA        IEY   TA
Sbjct: 65  FEGLRVLDIGCGGGILSESLARLGAQVTGIEITEKNVRVAAMHAQWS--GLEIEYRLATA 122

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           ++LV E  +FDAV+  EVIEHV     F    + L    G   +++INR++ A   AI+ 
Sbjct: 123 DQLVREGAQFDAVLNMEVIEHVEHLPAFLADCAQLARPGGVMFVASINRTLAALILAIVG 182

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLIL-QRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
           AE+IL WLP+GTH +   + P +++  L +R ++  K   G   NP T  ++ +  + VN
Sbjct: 183 AEYILRWLPRGTHHFRKLVRPAQVLDPLSERFALLHK--TGVRMNPFTRSFAFTRWMGVN 240

Query: 338 FI 339
           ++
Sbjct: 241 YM 242


>gi|424669503|ref|ZP_18106528.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia Ab55555]
 gi|401071574|gb|EJP80085.1| 3-demethylubiquinone-9 3-methyltransferase [Stenotrophomonas
           maltophilia Ab55555]
          Length = 238

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLKYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQAGADVTAIDLAPELVKVARLHA-LE-SGAKVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADMQLVDVSGMAYEPWRNHARLSSRTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|421619209|ref|ZP_16060171.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri KOS6]
 gi|409778760|gb|EKN58444.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri KOS6]
          Length = 232

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE +A  GA VTGID  E  + +ARLH  L      I+Y   TAE + 
Sbjct: 50  KVIDIGCGGGILSEAMAHRGAQVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEAMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           +E   +FD V   E++EHV DPA   ++   L    G    STINR+ +AYA AII AE+
Sbjct: 108 KEAPGQFDVVTCLEMLEHVPDPASVIQACCTLVKPGGHVFFSTINRNPKAYAFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++  
Sbjct: 168 VLQLLPRGTHDFKKFIRPSELGAWSREAGLAVKDIIGLTYNPLTKHYKLSADVDVNYMVQ 227

Query: 342 GTKNS 346
             K +
Sbjct: 228 AIKEA 232


>gi|336451370|ref|ZP_08621808.1| ubiquinone biosynthesis O-methyltransferase [Idiomarina sp. A28L]
 gi|336281741|gb|EGN75013.1| ubiquinone biosynthesis O-methyltransferase [Idiomarina sp. A28L]
          Length = 257

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 142/235 (60%), Gaps = 5/235 (2%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL +F+A+A+ WW+  G +K + A N  R+  I + +C HF+++  +  P  GL I+DV
Sbjct: 20  AELERFNALAEEWWNPNGKFKSVLAFNAARVDVIIAGICEHFQRNKAAQLPLSGLRILDV 79

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE--- 224
           GCG G++ EPLA++GA VTG+D  E NI +AR HA  +   + I Y     E L+ +   
Sbjct: 80  GCGAGLICEPLAKLGAEVTGVDGSEMNIAVARAHA--ESSGANITYHHALVEDLLADNAG 137

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
           ++ FD V+ +EVIEHVA+  E   + + L  S G  V++T++RS++++  AI+ AE++L+
Sbjct: 138 RQGFDVVLNTEVIEHVANQNELIATCANLVTSGGMLVMATLDRSIKSFLVAIVGAEYVLN 197

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            LP+GTH W  F+ P E++  L           GF +NPL   W +    +VN++
Sbjct: 198 MLPRGTHDWRYFVKPSEMIDKLSVHGFKPFRQKGFAFNPLVQEWRVKATPNVNYM 252


>gi|340788941|ref|YP_004754406.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans
           Ter331]
 gi|340554208|gb|AEK63583.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans
           Ter331]
          Length = 235

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 144/244 (59%), Gaps = 15/244 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P +   +EL KFS +A  WWD E  ++PLH +NP RL +I S                 G
Sbjct: 4   PMNADPSELKKFSDLAHRWWDPESEFRPLHEINPLRLEWINSRAA------------LAG 51

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
             ++D+GCGGGIL+E +AR GA VTGID  +K +K+A LH+ L+     + Y    AE++
Sbjct: 52  KQVLDIGCGGGILAESMARKGAVVTGIDLSDKALKVADLHS-LESGVQ-VRYEKIAAEEM 109

Query: 222 V-EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
              E  +FD V   E++EHV DPA   ++ + L    G    ST+NR+++AY  A++AAE
Sbjct: 110 AGREAGQFDVVTCMEMLEHVPDPASIVRACATLVKPGGQVFFSTLNRNLKAYLQAVLAAE 169

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L  LPKGTH ++ F+TP EL   ++ A + V  M G  YNPLT  +SL+ D SVN++ 
Sbjct: 170 YLLRMLPKGTHDYAKFITPAELAQFVRNAGLTVDVMRGMSYNPLTQIYSLNQDTSVNYLM 229

Query: 341 FGTK 344
             T+
Sbjct: 230 ACTR 233


>gi|448746419|ref|ZP_21728087.1| Ubiquinone biosynthesis O-methyltransferase [Halomonas titanicae
           BH1]
 gi|445566281|gb|ELY22388.1| Ubiquinone biosynthesis O-methyltransferase [Halomonas titanicae
           BH1]
          Length = 256

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/243 (41%), Positives = 144/243 (59%), Gaps = 20/243 (8%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEGLNIV 165
           AE+AKF A+A  WWD +G +KPLH +NP RL FI  R+ L               G  ++
Sbjct: 29  AEVAKFEALASRWWDPQGEFKPLHEINPLRLDFIDARAGLA--------------GKKVL 74

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ 225
           DVGCGGGILSE +A  GA VTGID  E  + +ARLHA+       I+Y   + E +  ++
Sbjct: 75  DVGCGGGILSESMANRGAKVTGIDLGEAPLAVARLHAE--DRGVEIDYQHISVEAMAAQK 132

Query: 226 RKF-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
             F DAV   E++EHV DPA   ++ SAL    G    ST+NR+ ++YA AI+ AE++L 
Sbjct: 133 PGFYDAVTCMEMLEHVPDPASVIRACSALVRPGGYVFFSTLNRTAKSYAFAILGAEYVLR 192

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDISVNFIAFGT 343
            LP+GTH ++ F+ P E+    +   ++V+E  G  YNPLT  + L S D+SVN++ +  
Sbjct: 193 LLPRGTHNYAKFIRPSEMAAWSRDCGLEVREQTGLTYNPLTRHYRLVSHDVSVNYMMYCR 252

Query: 344 KNS 346
           K S
Sbjct: 253 KVS 255


>gi|238023184|ref|ZP_04603610.1| hypothetical protein GCWU000324_03110 [Kingella oralis ATCC 51147]
 gi|237865567|gb|EEP66707.1| hypothetical protein GCWU000324_03110 [Kingella oralis ATCC 51147]
          Length = 237

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 143/233 (61%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +KPLH +NP RL +I          D ++     G  ++DVG
Sbjct: 12  EIAKFSQIADKWWDKTGEFKPLHDINPLRLDYI----------DQHAH--LAGKTVLDVG 59

Query: 169 CGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +AR GA +V G+D  E +++ A+ HAD     + + Y C + E L  E  +
Sbjct: 60  CGGGILSESMARRGAASVLGVDMAELSLQTAQAHADAG-RVANVAYRCVSVEDLAAEMPQ 118

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L  ++G    STINR+ ++Y  A++ AE++L+ +
Sbjct: 119 AFDVVTCMEMLEHVPDPASIIRACAKLAKADGWVFFSTINRNPKSYLHAVLGAEYVLNLV 178

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +DV +  G  +N LT ++ L DD+ VN++
Sbjct: 179 PKGTHDWQKFITPAELARMARQAELDVVDTRGMSFNLLTRQYFLQDDVRVNYM 231


>gi|392555428|ref|ZP_10302565.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           undina NCIMB 2128]
          Length = 237

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ +AE+AKF AIA+ WWD EG +KPLH +NP RL FI       F K+          
Sbjct: 5   QNVDNAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIADKTKGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS  +ARMGA VTGID  ++ + +A+LH+    ETS  +EY    AE+ 
Sbjct: 55  -TLDVGCGGGILSHSMARMGAKVTGIDMGQEPLTVAKLHS---LETSVPVEYIKVPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +E   +FD +   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 ADEHPERFDVITCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  AG  YNPL+ +++++DD+SVN++
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASAGLSYNPLSKQYTVNDDVSVNYM 229


>gi|408825074|ref|ZP_11209964.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           geniculata N1]
          Length = 238

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 141/245 (57%), Gaps = 15/245 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A S+   AEL KF+A+A+ WWDA+GP KPLHALNP RL ++   +            P  
Sbjct: 6   ASSNFDQAELDKFAALANRWWDADGPQKPLHALNPVRLKYVADRV------------PLR 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++D+GCGGG+LSE LA+ GA VT ID   + +K+ARLHA L+   + ++Y    AE 
Sbjct: 54  GARVLDIGCGGGLLSEALAQSGADVTAIDLAPELVKVARLHA-LE-SGAKVDYRVQAAED 111

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L  EQ   FD V   E++EHV DP    ++   L    G   +STINR+  A+A AI+ A
Sbjct: 112 LAAEQPGSFDVVTCMEMLEHVPDPGAIIEACKRLLKPGGHLFLSTINRTAAAFAVAIVGA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++   LPKGTH +  F+ P EL   L+ A + + +++G  Y P      LS    +N++
Sbjct: 172 EYVARLLPKGTHHYQEFIKPAELARWLREADLQLVDVSGMAYEPWRNHARLSSHTDINYL 231

Query: 340 AFGTK 344
           A+  K
Sbjct: 232 AYAVK 236


>gi|33597668|ref|NP_885311.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           parapertussis 12822]
 gi|33574096|emb|CAE38421.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella
           parapertussis]
          Length = 257

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 149/249 (59%), Gaps = 15/249 (6%)

Query: 93  LNNNKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           +    + SAP  ++  AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+ T       
Sbjct: 17  MTTATQSSAPGVNVDQAEVEKFSALAARWWDPESEFKPLHAINPLRLGWIQET------- 69

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
               A    G  ++DVGCGGGILSE +A  GA VTGID  EK++KIARLH  L+     +
Sbjct: 70  ----AGSLSGKRVLDVGCGGGILSESMAVAGAQVTGIDLAEKSLKIARLHG-LE-SGVKV 123

Query: 212 EYCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y     E+L  EQ  ++D V   E++EHV DPA   ++ +AL         ST+NR+ +
Sbjct: 124 DYRAVPVEELAAEQPGQYDVVTCMEMLEHVPDPASVVRACAALAKPGRWVFFSTLNRNPK 183

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++  AI+ AE++L  LP+GTH + SF+ P EL    ++A ++   M G  YNP+T  +SL
Sbjct: 184 SFLFAIVGAEYVLRLLPRGTHSYDSFIKPSELAASARQAGLEPTGMRGMEYNPITQVYSL 243

Query: 331 SDDISVNFI 339
           S + SVN++
Sbjct: 244 SANTSVNYL 252


>gi|339319508|ref|YP_004679203.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Midichloria
           mitochondrii IricVA]
 gi|338225633|gb|AEI88517.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus Midichloria
           mitochondrii IricVA]
          Length = 241

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 145/237 (61%), Gaps = 5/237 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S+    E+ KF+ +A  WW+ +GP K LH +N  R+ +IR+ L +   +   S    + L
Sbjct: 4   STFDSTEVKKFADLAANWWNCDGPLKQLHLMNRARIPYIRTILQQ---EKLISGDRLDQL 60

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +I+DVGCGGGILS PL+R+GA VTG+DA  +N++IA+ +A  +     I Y  +T E   
Sbjct: 61  DILDVGCGGGILSVPLSRLGANVTGLDACAENVQIAKDYAKHNDHH--INYVTSTIEDFA 118

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +E+  ++ V   E++EHVAD   F +S++ +    G   ISTIN++ ++Y  AI+ AE++
Sbjct: 119 KERVSYNVVCTLEIVEHVADLNLFLESVAQVAKPGGIIFISTINKTFKSYMQAILIAEYL 178

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  +P+G H W+ F+ P  +V IL R++    EM G  +NPLT  W L  ++ VN+I
Sbjct: 179 LKMVPRGGHDWNKFVEPSAIVDILSRSNCSFIEMKGMKFNPLTTEWYLDRNVDVNYI 235


>gi|119472400|ref|ZP_01614518.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonadales
           bacterium TW-7]
 gi|119444922|gb|EAW26220.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonadales
           bacterium TW-7]
          Length = 236

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 146/239 (61%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD EG +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKIPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +E   +FD V   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 AQEHPERFDVVTCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  +G  YNP + +++L++D+SVN+I
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASSGLSYNPFSKQYTLNNDVSVNYI 229


>gi|418293382|ref|ZP_12905291.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri ATCC 14405 = CCUG 16156]
 gi|379064774|gb|EHY77517.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri ATCC 14405 = CCUG 16156]
          Length = 232

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 142/245 (57%), Gaps = 15/245 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIA------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   TAE + 
Sbjct: 50  KVIDIGCGGGILSESMAQRGAHVTGIDMGEAPLSVARLH--LLESGLDIDYRQITAEAMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           +E   +FD V   E++EHV DPA   ++   L    G    STINR+ +AYA AII AE+
Sbjct: 108 DEAPEQFDVVTCLEMLEHVPDPASVIRACCKLVKPGGQVFFSTINRNPKAYAFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++  
Sbjct: 168 VLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTKHYKLAADVDVNYMVQ 227

Query: 342 GTKNS 346
             K +
Sbjct: 228 TIKEA 232


>gi|340729560|ref|XP_003403068.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Bombus terrestris]
          Length = 346

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 136/238 (57%), Gaps = 2/238 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  A++   S I+  WWD  G    LH LNP R+ F+R  L     K      P EG+
Sbjct: 98  STVDPADVEFHSKISSRWWDTNGEMSCLHLLNPLRVQFVRDGLANTGFKIKCPYLPLEGI 157

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKL 221
            I+DVGCGGGI SE LAR GA VTGIDA  + I +A+ HA LDP     + Y  TT E  
Sbjct: 158 KILDVGCGGGIYSESLARTGANVTGIDASSELITVAKGHAALDPSLDGKLNYVQTTIEDF 217

Query: 222 -VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +  +  FDAV+ASEVIEHV +   F KS  +   S G+  ++T N+++ ++   II AE
Sbjct: 218 ALINKGVFDAVVASEVIEHVNNKELFLKSCVSTLKSGGSIFLTTFNKTLSSWLGGIITAE 277

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           HIL  +PKGTH W+ F+TP E+  IL+      K + G  YNPL   WS     ++N+
Sbjct: 278 HILKLIPKGTHDWNKFVTPAEMQSILETCGCKTKLIHGLFYNPLKREWSWRTSTAINY 335


>gi|91775929|ref|YP_545685.1| 3-demethylubiquinone-9 3-methyltransferase [Methylobacillus
           flagellatus KT]
 gi|91709916|gb|ABE49844.1| 3-demethylubiquinone-9 3-methyltransferase [Methylobacillus
           flagellatus KT]
          Length = 229

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 143/237 (60%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  AEL KF+ +A  WWD    +KPLH +NP RL +I          D ++     G  
Sbjct: 2   NVDQAELQKFAELAHKWWDKNSEFKPLHEINPLRLNYI----------DEHAG--LAGKR 49

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE ++  GA VTGID  EK +K+A+LH      ++ ++Y   + E+L +
Sbjct: 50  VLDVGCGGGILSESMSERGAEVTGIDLGEKALKVAKLHQY--ESSAKVDYRLISVEELAQ 107

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E    FD V   E++EHV DPA   ++ + LT   G    STINR+ +AY  A++ AE++
Sbjct: 108 ESPESFDIVTCMEMLEHVPDPAAIVRACARLTKPGGKVFFSTINRNPKAYLFAVLGAEYV 167

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L+ LP+GTH++  F+ P EL    + A +DV    G  YNPLT R+ L++D+SVN+I
Sbjct: 168 LNLLPRGTHEYEKFIKPSELAGWARAAGLDVIASKGMGYNPLTKRYKLNNDVSVNYI 224


>gi|430760708|ref|YP_007216566.1| 3-demethylubiquinone-9 3-methyltransferase [Thioalkalivibrio
           nitratireducens DSM 14787]
 gi|430010332|gb|AGA33084.1| 3-demethylubiquinone-9 3-methyltransferase [Thioalkalivibrio
           nitratireducens DSM 14787]
          Length = 251

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/236 (41%), Positives = 138/236 (58%), Gaps = 4/236 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+  AE+A++  +A TWWD +GP+ PLH LN  R  +I   L R   +D  +A P  GL+
Sbjct: 11  SVDPAEVARYQRLAATWWDPQGPFWPLHVLNRVRSGWIVEQLARELGRDASAAMPLHGLS 70

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGILSE +AR GA V GID   +NI +AR HA  D +   I Y     E L  
Sbjct: 71  MLDVGCGGGILSESVARNGAEVLGIDVTARNIVVARDHA--DGQGLAIRYRQVALEDL-- 126

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           ++  FD V+  EVIEHV DP  F +   +     G  V++T+NR++ ++A  II AE++ 
Sbjct: 127 DEGDFDVVLNMEVIEHVVDPQAFLRECLSRVRPGGFLVLATLNRTLASFAAGIIGAEYLF 186

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
             LP+GTHQW  F+ P+EL   L+ AS  +   +G   NP T R  L     VN++
Sbjct: 187 RLLPRGTHQWHRFVRPKELTDPLEAASCRIVARSGVGVNPFTRRMRLIRYEGVNYM 242


>gi|365884430|ref|ZP_09423479.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. ORS 375]
 gi|365287004|emb|CCD96010.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. ORS 375]
          Length = 260

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 137/239 (57%), Gaps = 2/239 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
            PS++  AE+A+FS +A+ WW  +G +K +HA N  R+ ++   L     +DP +  P  
Sbjct: 17  GPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVGYLCERLPALVGRDPAANLPLA 76

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL I+DVGCG GI++EPL+R+GA   GIDA E+N+ +A  HA    + + + Y     E+
Sbjct: 77  GLEIIDVGCGAGIVTEPLSRLGAKTLGIDAAERNVLVAADHA--RKQRADVAYRHAVPEE 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           LV E    D V+  EV+EHVAD A F   ++ L    G  VI T+NR+  ++  AII AE
Sbjct: 135 LVAEGAHADIVLILEVVEHVADLARFVGHVADLVRPGGVLVIGTLNRTSTSFVKAIIGAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +IL WLP+GTH W  F+ P EL  +L        E      NPLT RW +    S N++
Sbjct: 195 YILGWLPRGTHDWRRFVKPAELQTLLAPLRFLPVETVAVELNPLTMRWRIGGRPSTNYL 253


>gi|359456187|ref|ZP_09245375.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20495]
 gi|414070334|ref|ZP_11406320.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           Bsw20308]
 gi|358046747|dbj|GAA81624.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20495]
 gi|410807251|gb|EKS13231.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           Bsw20308]
          Length = 236

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 148/244 (60%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKVPAEEF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +   +FD +   E++EHV DPA    +++AL         ST+N++ +AY  AI+ AE
Sbjct: 111 ASQNPERFDVITCMEMLEHVPDPASIIHAVAALAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P+GTH    F+ P +L+   ++A + V+   G  YNPL+ +++L++D+SVN+I 
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASTGLSYNPLSKQYTLNNDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|238898607|ref|YP_002924288.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466366|gb|ACQ68140.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 243

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 144/248 (58%), Gaps = 14/248 (5%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           K + P ++   E+AKFSA+A  WWD  G +KPLH +NP RL +I       F K      
Sbjct: 6   KWNKPHNVDEQEIAKFSALASRWWDTSGEFKPLHRINPLRLDYILQHTKGIFEK------ 59

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTT 217
                 ++DVGCGGGIL+E LAR GA VTG+D   +++++AR H+ L+     I + C T
Sbjct: 60  -----KVLDVGCGGGILAESLAREGAQVTGLDMDVQSLQVARRHS-LESGLE-IHFVCQT 112

Query: 218 AEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
            E   E+  + +D V   E++EHV DPA   ++ + L    G    STINR+ +A+  A+
Sbjct: 113 VESYAEDHAQDYDVVTCMEMLEHVPDPASVVRACATLVKPSGHVFFSTINRNTKAWLLAV 172

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
           +AAE+IL  LPKGTH    F+ P EL+  L+ AS+  K M G  YNP+  R+ L  ++ V
Sbjct: 173 VAAEYILKMLPKGTHDAKKFIRPSELIDWLEAASLQEKHMIGLHYNPILDRFKLGPNVDV 232

Query: 337 NFIAFGTK 344
           N++ +  K
Sbjct: 233 NYMLYAQK 240


>gi|359436783|ref|ZP_09226868.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20311]
 gi|358028540|dbj|GAA63117.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20311]
          Length = 236

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 145/239 (60%), Gaps = 16/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ +AE+AKF AIA+ WWD EG +KPLH +NP RL FI       F K+          
Sbjct: 5   QNVDNAEIAKFEAIAERWWDLEGEFKPLHEINPLRLDFIADKTKGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS  +ARMGA VTGID  ++ + +A+LH+    ETS  +EY    AE+ 
Sbjct: 55  -TLDVGCGGGILSHSMARMGAKVTGIDMGQEPLTVAKLHS---LETSVPVEYIKVPAEQF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             E   +FD +   E++EHV DPA    +++ L         ST+N++ +AY  AI+ AE
Sbjct: 111 ANEHPERFDVITCMEMLEHVPDPASIIHAVAKLAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            +L  +P+GTH    F+ P +L+   ++A + V+  AG  YNPL+ +++++DD+SVN++
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASAGLSYNPLSKQYTMNDDVSVNYM 229


>gi|427408332|ref|ZP_18898534.1| 3-demethylubiquinone-9 3-O-methyltransferase [Sphingobium
           yanoikuyae ATCC 51230]
 gi|425712642|gb|EKU75656.1| 3-demethylubiquinone-9 3-O-methyltransferase [Sphingobium
           yanoikuyae ATCC 51230]
          Length = 243

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/231 (41%), Positives = 144/231 (62%), Gaps = 6/231 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E A F  +A  WWD +G    LH LNP RLA+IR+ + RH+  D +  RP  G   +DVG
Sbjct: 12  EAAHFGTMAADWWDPKGSSAMLHKLNPVRLAYIRTAIDRHWDSDDHGFRPLNGKRALDVG 71

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+EPLAR+GA+VTG+DA  +NI +A  HA    +   I+Y  T  E++ +    +
Sbjct: 72  CGAGLLAEPLARLGASVTGLDAAPENIAVAAAHA--QGQGLAIDYRATPVEQVSDS--GY 127

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V + EVIEHVADPA F ++L+A    +G  ++ST NR+  +    I   E I   +PK
Sbjct: 128 DLVTSMEVIEHVADPAAFVRALAAKLAPDGLMILSTPNRTPMSRLAMITIGESI-GGIPK 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH W+ F+TP+EL  +L+ A ++V + +G  ++P  G ++LS + ++N++
Sbjct: 187 GTHDWAKFITPDELTALLEDAGLEVTDSSGLAFDPARG-FTLSANTAINYL 236


>gi|392551522|ref|ZP_10298659.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Pseudoalteromonas spongiae UST010723-006]
          Length = 236

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 143/233 (61%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+AKF A+AD WWD  G +KPLH +NP RL FI          + YS   F   N++DV
Sbjct: 10  SEIAKFEAMADRWWDLNGEFKPLHEINPLRLDFI----------NLYSQGIFSK-NVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +A++GA VTGID  E+ + +A+LHA L+   S + Y   TAE   E+  +
Sbjct: 59  GCGGGILAESMAKLGAHVTGIDMGEEPLNVAKLHA-LEVGVS-LNYEKVTAEAFAEQNPQ 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DP     SL+ L    G   +ST+N++++ Y  AI+ AEH+L  +
Sbjct: 117 QFDVVTCMEMLEHVPDPESVIASLATLVKPGGHVFMSTLNKTLKGYLFAIVGAEHLLKIV 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH    F+ P  L+   ++  +  + M G  YNPL   +SL++D+SVN++
Sbjct: 177 PKGTHDHDKFIKPATLINWAEKYGLKARIMKGLSYNPLGQTYSLTNDVSVNYM 229


>gi|300114708|ref|YP_003761283.1| ubiquinone biosynthesis O-methyltransferase [Nitrosococcus watsonii
           C-113]
 gi|299540645|gb|ADJ28962.1| ubiquinone biosynthesis O-methyltransferase [Nitrosococcus watsonii
           C-113]
          Length = 243

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 139/239 (58%), Gaps = 15/239 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A  WWD EG +KPLH +NP RL +IR+          YS+       ++DVG
Sbjct: 12  EIAKFEQLAHRWWDQEGEFKPLHDINPLRLEYIRN----------YSS--LASKRVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E L R+GA VTGID  +  + +ARLHA    E   I+Y   + E+L E +   
Sbjct: 60  CGGGILTEELTRLGAKVTGIDLGKAPLSVARLHAL--EEGLEIDYQQISVEQLAETKAES 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD +   E++EHV DPA    +   L    G    ST+NR+ +AY  A+I AE+ L  LP
Sbjct: 118 FDIITNLEMLEHVPDPASIVAACGQLLRPGGKAFFSTLNRTPKAYLFAVIGAEYALRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P EL    ++  I ++ + G  YNPLT  + L  DI+VN++A+G K +
Sbjct: 178 KGTHDYHRFIRPAELETWCRKGGIGLQNLTGLHYNPLTQHYRLGKDINVNYLAYGIKKN 236


>gi|389714773|ref|ZP_10187346.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. HA]
 gi|388609749|gb|EIM38896.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. HA]
          Length = 242

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 140/237 (59%), Gaps = 13/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A A  WWD    ++PLH +NP RL +I          D Y A    G  ++DVG
Sbjct: 10  EIAKFEAFAAIWWDQHSEFRPLHMINPLRLNWI----------DEY-AGGLSGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA+ +   S I+Y     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLNVARLHAEQE-GVSNIQYRQVPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AII AE++L  L 
Sbjct: 118 YDVVTCMEMLEHVPDPASIIQACHKLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLA 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTH +S F+ P EL   ++ A + +K+M G  YNPLT R+ L+ ++ VN++ +  K
Sbjct: 178 RGTHDYSKFIKPSELAHDIRNAGLKLKDMTGLHYNPLTKRYWLAPNVDVNYMVYTAK 234


>gi|421849070|ref|ZP_16282054.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus NBRC 101655]
 gi|371460094|dbj|GAB27257.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus NBRC 101655]
          Length = 246

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 145/251 (57%), Gaps = 12/251 (4%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +  APSS+   E+A+FSA+AD WWD  GP +PLHA+N  R+ +      RH    P   R
Sbjct: 5   REEAPSSVSSEEIARFSALADKWWDPTGPMRPLHAMNGLRIEWA----SRHL---PLRGR 57

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTIEYC 214
                +++D+GCG G+ SE LA+ G  V G+DA    I  A+ H + +P    + T+ Y 
Sbjct: 58  KSRKPHVLDIGCGAGLASEALAKAGYDVLGLDASANGIAAAQAHLEANPLPAGSGTLHYR 117

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             +AE+LV E  KFDAV+A E+IEHV DP  F   LS L  + G  ++ST+NR++R+ A 
Sbjct: 118 QGSAEELVAEHAKFDAVMALEIIEHVTDPEAFMIMLSQLVDANGTVIVSTMNRTLRSLAV 177

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
             I AE++L  LP GTH+W  F+ P EL    + A + +  ++G    P  G W  + D+
Sbjct: 178 GKIGAEYLLRLLPVGTHEWRKFIQPSELGRYARAAGLRMVAISGMA--PGIGSWKETRDL 235

Query: 335 SVNFIAFGTKN 345
            +N+IA   K+
Sbjct: 236 GINYIAAFKKD 246


>gi|359798449|ref|ZP_09301020.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           arsenitoxydans SY8]
 gi|359363271|gb|EHK64997.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Achromobacter
           arsenitoxydans SY8]
          Length = 242

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 16/250 (6%)

Query: 93  LNNNKKHSAPSSLK--HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           +N     +A +S+    AE+ KFSA+A  WWD E  +KPLHA+NP RL +I+        
Sbjct: 1   MNTQTHDTAQASVNADQAEIDKFSALASRWWDPESEFKPLHAINPLRLEWIQEC------ 54

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
                A    G  ++DVGCGGGILSE +AR GA VTGID  +K++KIARLH  L+     
Sbjct: 55  -----AGSLAGKKVLDVGCGGGILSEAMARSGAEVTGIDLADKSLKIARLHG-LESGIK- 107

Query: 211 IEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
           +EY     E+L  EQ  ++D V   E++EHV DPA   ++ S L    G    ST+NR+ 
Sbjct: 108 VEYRKVPVEELAAEQPGQYDVVTCMEMLEHVPDPASIVRACSTLVKPGGWVFFSTLNRNA 167

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           +++  AI+ AE++L  LP+GTH +  F+ P EL    + A ++   M G  YNP+T  ++
Sbjct: 168 KSFLFAIVGAEYVLRLLPRGTHTYDQFIKPSELSAAARGAGLEPVSMRGMEYNPITQIYT 227

Query: 330 LSDDISVNFI 339
           LS D SVN++
Sbjct: 228 LSADTSVNYL 237


>gi|329113390|ref|ZP_08242171.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter pomorum
           DM001]
 gi|326697215|gb|EGE48875.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter pomorum
           DM001]
          Length = 246

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 143/246 (58%), Gaps = 12/246 (4%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +  APSS+   E+A+FSA+AD WWD  GP +PLHA+N  R+ +      RH    P   R
Sbjct: 5   REEAPSSVSSEEIARFSALADKWWDPTGPMRPLHAMNGLRIEWA----SRHL---PLRGR 57

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTIEYC 214
                +++D+GCG G+ SE LA+ G  V G+DA    I  A+ H + +P    + T+ Y 
Sbjct: 58  KSRKPHVLDIGCGAGLASEALAKAGYNVLGLDASANGIAAAQAHLEANPLPAGSGTLHYR 117

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             +AE+LV E  KFDAV+A E+IEHV DP  F   L+ L  + G  ++ST+NR++R+ A 
Sbjct: 118 QGSAEELVAEHAKFDAVMALEIIEHVTDPEAFMVMLAQLVDANGTIIVSTMNRTLRSLAV 177

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
             I AE++L  LP GTH+W  F+ P EL    + A + +  ++G    P  G W  + D+
Sbjct: 178 GKIGAEYLLRLLPVGTHEWRKFIQPSELGRYARAAGLRMVAISGMA--PGIGSWKETQDL 235

Query: 335 SVNFIA 340
            +N+IA
Sbjct: 236 GINYIA 241


>gi|258542221|ref|YP_003187654.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|384042142|ref|YP_005480886.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-12]
 gi|384050659|ref|YP_005477722.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-03]
 gi|384053767|ref|YP_005486861.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-07]
 gi|384057001|ref|YP_005489668.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-22]
 gi|384059642|ref|YP_005498770.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-26]
 gi|384062934|ref|YP_005483576.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-32]
 gi|384119010|ref|YP_005501634.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256633299|dbj|BAH99274.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636358|dbj|BAI02327.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639411|dbj|BAI05373.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642467|dbj|BAI08422.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645522|dbj|BAI11470.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648575|dbj|BAI14516.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651628|dbj|BAI17562.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654619|dbj|BAI20546.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 246

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 145/246 (58%), Gaps = 12/246 (4%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +  APSS+   E+A+FSA+AD WWD  GP +PLHA+N  R+ +    L    RK   S R
Sbjct: 5   REEAPSSVSSEEIARFSALADKWWDPTGPMRPLHAMNGLRIEWASRHLPLRGRK---SRR 61

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTIEYC 214
           P    +++D+GCG G+ SE LA+ G  V G+DA    I  A+ H + +P    + T+ Y 
Sbjct: 62  P----HVLDIGCGAGLASEALAKAGYDVLGLDASANGIAAAQAHLEANPLPAGSGTLHYR 117

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             +AE+LV E  KFDAV+A E+IEHV DP  F   L+ L  + G  ++ST+NR++R+ A 
Sbjct: 118 QGSAEELVAEHAKFDAVMALEIIEHVTDPEAFMIMLAQLVDANGTVIVSTMNRTLRSLAV 177

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
             I AE++L  LP GTH+W  F+ P EL    + A + +  ++G    P  G W  + D+
Sbjct: 178 GKIGAEYLLRLLPVGTHEWRKFIQPSELGRYARAAGLRMVAISGMA--PGIGSWKETRDL 235

Query: 335 SVNFIA 340
            +N+IA
Sbjct: 236 GINYIA 241


>gi|440739712|ref|ZP_20919218.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           fluorescens BRIP34879]
 gi|447915924|ref|YP_007396492.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           poae RE*1-1-14]
 gi|440379042|gb|ELQ15647.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           fluorescens BRIP34879]
 gi|445199787|gb|AGE24996.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           poae RE*1-1-14]
          Length = 232

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|404401722|ref|ZP_10993306.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           fuscovaginae UPB0736]
          Length = 232

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERV------------KLAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +ARLH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVARLH-QLESGVE-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D++VN++
Sbjct: 168 IMGLLPRGTHDFKKFIRPSELGAWSRDAGLSVKDIIGLTYNPLTKHYKLASDVAVNYM 225


>gi|398844134|ref|ZP_10601234.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM84]
 gi|398254875|gb|EJN39932.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM84]
          Length = 232

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVA------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + LS D+ VN++
Sbjct: 168 ILKMLPRGTHDFKKFIRPSELGAWSRVAGLEVKDIIGLTYNPLTKHYKLSSDVDVNYM 225


>gi|425065704|ref|ZP_18468824.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. gallicida P1059]
 gi|404384080|gb|EJZ80525.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. gallicida P1059]
          Length = 242

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 138/246 (56%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQ-----------QANGLTGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLHIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L  + G    STINR+++A+A 
Sbjct: 111 QTALFAERGEGEKFDVITCMEMLEHVPDPSSIIACCKQLLKANGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|397687517|ref|YP_006524836.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri DSM 10701]
 gi|395809073|gb|AFN78478.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri DSM 10701]
          Length = 232

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 137/238 (57%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDQAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +AR GA VTGID  E  + +ARLH  L      ++Y   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMARRGAQVTGIDMGEAPLSVARLH--LLESGLEVDYRQITAESLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE    FD V   E++EHV DPA   ++   +    G    STINR+ +AYA AI+ AE+
Sbjct: 108 EESPETFDVVTCLEMLEHVPDPASVIRACHRMVKPGGQVFFSTINRNPKAYALAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  LP+GTH +  F+ P EL    +   + VK++ G  YNPLT  + LS D+ VN++
Sbjct: 168 LLQLLPRGTHDYKKFIRPSELGAWSRDTGLTVKDIVGLTYNPLTKHYKLSADVDVNYM 225


>gi|88859278|ref|ZP_01133918.1| bifunctional protein [Pseudoalteromonas tunicata D2]
 gi|88818295|gb|EAR28110.1| bifunctional protein [Pseudoalteromonas tunicata D2]
          Length = 235

 Score =  188 bits (478), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 141/244 (57%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   E+AKF A+A  WWD  G +KPLH +NP RL FI       F K           
Sbjct: 5   QNVDQQEIAKFEAVAQHWWDLTGDFKPLHEINPLRLDFIMDHAGGLFDK----------- 53

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILSE +ARMGA+VTGID  ++ + +A+LH+    ET   ++Y  TTAE  
Sbjct: 54  KTLDVGCGGGILSESMARMGASVTGIDMGQEPLNVAKLHS---LETGVKVDYVQTTAEDF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +    FD +   E++EHV DP    +S++ L    G    ST+N+++++Y  AI+ AE
Sbjct: 111 ANQHPASFDVITCMEMLEHVPDPESIIQSIAQLVKPGGQVFFSTLNKTLKSYLFAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            IL  +P GTH    F+ P +L+   ++  + V+   G  YNP++G++SL  D+SVN+I 
Sbjct: 171 KILKMVPNGTHDHQKFIRPAQLINWAEKYDLKVRASKGLSYNPISGQYSLGSDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|281210404|gb|EFA84570.1| 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase
           [Polysphondylium pallidum PN500]
          Length = 304

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 145/255 (56%), Gaps = 11/255 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCR----HFRKDPYSARP 158
           SS+K  E+  F+ +A  WWD  GP +PLH +NP R+ ++   L +           S + 
Sbjct: 43  SSMKEEEIKFFNGMAKDWWDINGPMRPLHKMNPVRVQYMVDRLKQSGVIKTSGGGGSGKS 102

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS------TIE 212
             GL I+DVGCG G+L+E  +R+GA V G+DA   NI +A  HA  D   S      T++
Sbjct: 103 LAGLKIIDVGCGAGLLTESFSRLGADVVGLDAAGNNISMAIAHAKQDKTLSDNIDRNTLQ 162

Query: 213 YCCTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y  +T E+  ++    +D V   EV+EHV +  EF K  ++L    G   +ST+N++  A
Sbjct: 163 YIESTVEQHAIDHHSSYDIVTTMEVVEHVENVPEFIKQCTSLIKPGGCFFLSTMNKTTLA 222

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y T I+ AE+I  ++P GTH W  ++ PE+L   L    +++K+++G   NPLT  WSL 
Sbjct: 223 YLTTIVGAEYICKFVPVGTHHWDQYVKPEDLQSYLSGNQVNLKDISGLFMNPLTMNWSLI 282

Query: 332 DDISVNFIAFGTKNS 346
           ++ +VN+I F  K++
Sbjct: 283 NNTNVNYILFAMKST 297


>gi|194100022|ref|YP_002003161.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|268593874|ref|ZP_06128041.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|268683342|ref|ZP_06150204.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|385857993|ref|YP_005904505.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           NZ-05/33]
 gi|418289187|ref|ZP_12901558.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM233]
 gi|418291444|ref|ZP_12903449.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM220]
 gi|193935312|gb|ACF31136.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|268547263|gb|EEZ42681.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|268623626|gb|EEZ56026.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|325208882|gb|ADZ04334.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NZ-05/33]
 gi|372199826|gb|EHP14002.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM220]
 gi|372200132|gb|EHP14258.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM233]
          Length = 242

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 56

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 57  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 115

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 116 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAA 175

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 176 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|262377114|ref|ZP_06070339.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter lwoffii
           SH145]
 gi|262307852|gb|EEY88990.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter lwoffii
           SH145]
          Length = 242

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 139/239 (58%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEAFAAIWWDQHSEFRPLHMINPLRLNWIDE-----------HAGGLSGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID     + +AR+HA+ +   S IEY     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGAAPLNVARIHAEQE-GVSNIEYRQVPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AII AE++L  L 
Sbjct: 118 YDIVTCMEMLEHVPDPASIIQACHKLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLA 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +S F+ P EL   ++ A + +K+M G  YNPLT R+ L+ ++ VN++ +  K+S
Sbjct: 178 KGTHDYSKFIKPSELAHDIRNAGLKLKDMTGLHYNPLTKRYWLAPNVDVNYMVYTVKDS 236


>gi|218767397|ref|YP_002341909.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           Z2491]
 gi|433480851|ref|ZP_20438128.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63041]
 gi|433520716|ref|ZP_20477424.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 65014]
 gi|433541907|ref|ZP_20498345.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63006]
 gi|17369073|sp|Q9JWE6.1|UBIG_NEIMA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|121051405|emb|CAM07698.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           Z2491]
 gi|432213269|gb|ELK69194.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63041]
 gi|432251332|gb|ELL06701.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 65014]
 gi|432274978|gb|ELL30056.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63006]
          Length = 238

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLKFVPKGTHDWKKFIVPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|254468405|ref|ZP_05081811.1| 3-demethylubiquinone-9 3-O-methyltransferase [beta proteobacterium
           KB13]
 gi|207087215|gb|EDZ64498.1| 3-demethylubiquinone-9 3-O-methyltransferase [beta proteobacterium
           KB13]
          Length = 237

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF+ IA  WWD    +KPLH +NP R+ +I                P    NI+DVG
Sbjct: 12  EVEKFNKIAHKWWDPSSEFKPLHDINPLRVNYINDLF------------PLNEKNILDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQRK 227
           CGGGIL+E +A++G  VTGID  +  IKIA+LHA       +I+Y     E  ++ +  K
Sbjct: 60  CGGGILAESMAKLGGNVTGIDQSDIAIKIAKLHAK--ENNLSIDYKLLNIEDFLKKDSNK 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD +   E+IEHV DPA   KS S      G   +STINR+++A+  AI+ AE+IL+ LP
Sbjct: 118 FDVITCLEMIEHVPDPASIIKSCSKKLKKNGRLYVSTINRNLKAFLFAIVGAEYILNLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH +  F+ P E+       ++++  + G  YNP   ++SL  D+SVN+I
Sbjct: 178 KGTHHYDKFIKPSEVKSWANSLNMNISNITGMTYNPFLKKYSLGSDVSVNYI 229


>gi|332534566|ref|ZP_08410401.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332035986|gb|EGI72465.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 236

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKVPAEEF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +   +FD +   E++EHV DPA    +++AL         ST+N++ +AY  AI+ AE
Sbjct: 111 ASQHPERFDVITCMEMLEHVPDPASIIHAVAALAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P+GTH    F+ P +L+   ++A + V+   G  YNPL+ +++L+ D+SVN+I 
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASTGLSYNPLSKQYTLNSDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|433522726|ref|ZP_20479406.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 61103]
 gi|432257374|gb|ELL12675.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 61103]
          Length = 238

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLRFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|51473802|ref|YP_067559.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia typhi str.
           Wilmington]
 gi|383752577|ref|YP_005427677.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           typhi str. TH1527]
 gi|383843413|ref|YP_005423916.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           typhi str. B9991CWPP]
 gi|57013191|sp|Q68WB5.1|UBIG_RICTY RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|51460114|gb|AAU04077.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsia typhi str.
           Wilmington]
 gi|380759220|gb|AFE54455.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           typhi str. TH1527]
 gi|380760060|gb|AFE55294.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           typhi str. B9991CWPP]
          Length = 246

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 10/239 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+ +G +  LH +N  R+ +I   +  H+            L
Sbjct: 2   SSINKKELKKFEKISHNWWNKDGEFGILHRINHIRIEYIIEKIKLHYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A ++A        I Y  TT E+L 
Sbjct: 55  QILDVGCGGGLIAAPLASQGFNVTAIDALKSNIETATIYAQ--KNDLKINYLQTTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE+I
Sbjct: 112 ENDKLYDVVICLEVIEHVENVQQFILNLVQHIKPNGIAIISTINRTKKAYLFGIIVAEYI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           L W+PK TH +S FL P E+  IL   +I++KE+ G V+N     W LS+DI VN+  +
Sbjct: 172 LGWVPKNTHDYSKFLKPSEIYEILTDTNIEIKELKGLVFNLARNEWKLSNDIDVNYFMY 230


>gi|240013207|ref|ZP_04720120.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           DGI18]
 gi|240120278|ref|ZP_04733240.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID24-1]
 gi|416165253|ref|ZP_11607377.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis N1568]
 gi|421562062|ref|ZP_16007898.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2657]
 gi|421566376|ref|ZP_16012127.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3081]
 gi|421567865|ref|ZP_16013596.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3001]
 gi|433474356|ref|ZP_20431709.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97021]
 gi|433482786|ref|ZP_20440037.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2006087]
 gi|433484801|ref|ZP_20442015.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2002038]
 gi|433487032|ref|ZP_20444219.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97014]
 gi|254670373|emb|CBA05857.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha153]
 gi|325127308|gb|EGC50243.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis N1568]
 gi|402335451|gb|EJU70716.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2657]
 gi|402340389|gb|EJU75590.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3081]
 gi|402342810|gb|EJU77966.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3001]
 gi|432207237|gb|ELK63229.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97021]
 gi|432214106|gb|ELK70013.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2006087]
 gi|432219038|gb|ELK74886.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2002038]
 gi|432220017|gb|ELK75844.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97014]
          Length = 238

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|284800149|ref|ZP_06390562.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria subflava
           NJ9703]
 gi|284795871|gb|EFC51218.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria subflava
           NJ9703]
          Length = 242

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 138/234 (58%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKFS IAD WWD  G +KPLH +NP RL +I          D Y+     G  ++DV
Sbjct: 16  GEIAKFSQIADKWWDTNGEFKPLHDINPLRLDYI----------DGYAG--LAGKRVLDV 63

Query: 168 GCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGILSE +A+ GA  VTGID  EK+++ A  HA      + I+Y C   E L  EQ 
Sbjct: 64  GCGGGILSESMAKRGAEHVTGIDMAEKSLQTAAAHAAAQ-HVANIDYRCIRVEDLAAEQP 122

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DPA   ++ + L   +G    STINR+ ++Y   I+ AE++L +
Sbjct: 123 HSFDVVTCMEMMEHVPDPAAIVQACAKLVKPDGMVFFSTINRNPKSYLHLIVGAEYLLKF 182

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH W  F+TP EL  + ++A +D     G  YN L+GR+SL D   VN++
Sbjct: 183 VPKGTHDWKKFITPAELARMCRQAGLDTVGSKGMTYNLLSGRYSLCDSTEVNYM 236


>gi|170720558|ref|YP_001748246.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           W619]
 gi|226725555|sp|B1J5G4.1|UBIG_PSEPW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|169758561|gb|ACA71877.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas putida
           W619]
          Length = 232

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVE-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD +   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVITCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + LS D+ VN++
Sbjct: 168 ILKMLPRGTHDFKKFIRPSELGAWSRVAGLEVKDIIGLTYNPLTKHYKLSSDVDVNYM 225


>gi|113461305|ref|YP_719374.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus somnus
           129PT]
 gi|123031370|sp|Q0I3Y4.1|UBIG_HAES1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|112823348|gb|ABI25437.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus somnus
           129PT]
          Length = 238

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 140/243 (57%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            +L   EL KF  +A +WWD  G +KP+H LNPTRL +I+             A      
Sbjct: 2   QNLDPQELEKFEKMAKSWWDPNGDFKPIHQLNPTRLQYIQQ-----------QANGLTEK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID     +++ARLHA    +   I+Y   T E+ +
Sbjct: 51  KVLDVGCGGGILSEAMAKQGAIVTGIDMTVAPLEVARLHAK--EQGLVIDYQQITVEEFL 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           ++Q      KFD +   E++EHV DP    +S  AL    G    STIN + +A+A  ++
Sbjct: 109 QKQTALYAEKFDVITCMEMLEHVPDPLSIIQSCRALLKPNGVLFFSTINHTFKAWALVVL 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE+IL  LPKGTH +  F+ P EL+    +A++  K + G+ YN LTG++ L+ D+S N
Sbjct: 169 GAEYILKMLPKGTHDYDKFIKPAELLHWTDQANLVCKNICGYHYNLLTGKFWLNQDVSAN 228

Query: 338 FIA 340
           ++A
Sbjct: 229 YMA 231


>gi|402699916|ref|ZP_10847895.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           fragi A22]
          Length = 232

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP RL +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRLNWIDERV------------QLAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE+L 
Sbjct: 50  KVLDVGCGGGILSESMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEELA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 NEMPGQFDVVTCLEMLEHVPDPASVIRACYRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  +P+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L  D+ VN++
Sbjct: 168 IMKLIPRGTHDFKKFIRPSELGAWSRQAGLSVKDITGLTYNPLTKHYKLGADVDVNYM 225


>gi|385329277|ref|YP_005883580.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha710]
 gi|385854073|ref|YP_005900587.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           H44/76]
 gi|416198630|ref|ZP_11618997.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis CU385]
 gi|421541289|ref|ZP_15987415.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 93004]
 gi|421545355|ref|ZP_15991418.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM140]
 gi|421547405|ref|ZP_15993440.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM183]
 gi|421549437|ref|ZP_15995450.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2781]
 gi|421551550|ref|ZP_15997538.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 69166]
 gi|421553135|ref|ZP_15999102.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM576]
 gi|433466011|ref|ZP_20423480.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM422]
 gi|433468027|ref|ZP_20425474.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 87255]
 gi|433470174|ref|ZP_20427579.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 98080]
 gi|433472331|ref|ZP_20429707.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 68094]
 gi|433478586|ref|ZP_20435892.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 70012]
 gi|433489204|ref|ZP_20446350.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M13255]
 gi|433491388|ref|ZP_20448497.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM418]
 gi|433493472|ref|ZP_20450553.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM586]
 gi|433495520|ref|ZP_20452579.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM762]
 gi|433497591|ref|ZP_20454616.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M7089]
 gi|433499636|ref|ZP_20456639.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M7124]
 gi|433501704|ref|ZP_20458683.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM174]
 gi|433503803|ref|ZP_20460755.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM126]
 gi|433505936|ref|ZP_20462864.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 9506]
 gi|433508021|ref|ZP_20464915.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 9757]
 gi|433510173|ref|ZP_20467027.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 12888]
 gi|433512232|ref|ZP_20469043.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 4119]
 gi|433527033|ref|ZP_20483651.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 69096]
 gi|433537639|ref|ZP_20494130.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 77221]
 gi|433539794|ref|ZP_20496258.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 70030]
 gi|17369082|sp|Q9JXI7.2|UBIG_NEIMB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|254673723|emb|CBA09364.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha275]
 gi|308390128|gb|ADO32448.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha710]
 gi|325139352|gb|EGC61892.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis CU385]
 gi|325201077|gb|ADY96532.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis H44/76]
 gi|402314812|gb|EJU50380.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 93004]
 gi|402320715|gb|EJU56196.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM183]
 gi|402320902|gb|EJU56382.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM140]
 gi|402323144|gb|EJU58590.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2781]
 gi|402327055|gb|EJU62451.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 69166]
 gi|402328896|gb|EJU64261.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM576]
 gi|432200399|gb|ELK56492.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM422]
 gi|432200708|gb|ELK56797.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 98080]
 gi|432200938|gb|ELK57025.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 87255]
 gi|432206284|gb|ELK62293.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 68094]
 gi|432212866|gb|ELK68797.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 70012]
 gi|432220134|gb|ELK75959.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M13255]
 gi|432225140|gb|ELK80893.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM418]
 gi|432225532|gb|ELK81273.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM586]
 gi|432227326|gb|ELK83036.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM762]
 gi|432231530|gb|ELK87189.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M7089]
 gi|432232545|gb|ELK88184.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M7124]
 gi|432232705|gb|ELK88341.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM174]
 gi|432238256|gb|ELK93829.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM126]
 gi|432238460|gb|ELK94026.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 9506]
 gi|432238603|gb|ELK94168.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 9757]
 gi|432244417|gb|ELK99905.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 12888]
 gi|432244880|gb|ELL00360.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 4119]
 gi|432258121|gb|ELL13410.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 69096]
 gi|432270388|gb|ELL25526.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 77221]
 gi|432270839|gb|ELL25972.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 70030]
          Length = 238

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|15677854|ref|NP_275022.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           MC58]
 gi|385340876|ref|YP_005894748.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           G2136]
 gi|416180113|ref|ZP_11611298.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M6190]
 gi|416193662|ref|ZP_11617218.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis ES14902]
 gi|416208841|ref|ZP_11621172.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 961-5945]
 gi|427828124|ref|ZP_18995142.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis H44/76]
 gi|11256790|pir||H81015 3-demethylubiquinone-9 3-methyltransferase NMB2030 [imported] -
           Neisseria meningitidis (strain MC58 serogroup B)
 gi|7227291|gb|AAF42352.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           MC58]
 gi|316983907|gb|EFV62886.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis H44/76]
 gi|325131272|gb|EGC53983.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M6190]
 gi|325137300|gb|EGC59888.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis ES14902]
 gi|325141426|gb|EGC63904.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 961-5945]
 gi|325199120|gb|ADY94576.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis G2136]
          Length = 242

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 56

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 57  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 115

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 116 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAA 175

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 176 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|387892901|ref|YP_006323198.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           A506]
 gi|423690701|ref|ZP_17665221.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens SS101]
 gi|387159614|gb|AFJ54813.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens A506]
 gi|387998252|gb|EIK59581.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens SS101]
          Length = 232

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|384428173|ref|YP_005637532.1| ubiquinone biosynthesis O-methyltransferase [Xanthomonas campestris
           pv. raphani 756C]
 gi|341937275|gb|AEL07414.1| ubiquinone biosynthesis O-methyltransferase [Xanthomonas campestris
           pv. raphani 756C]
          Length = 239

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 144/251 (57%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N    S  S+    EL KF+A+A+ WWDA+GP KPLHALNP RL ++   +         
Sbjct: 2   NPNPQSTSSNFHQTELDKFAALANRWWDADGPQKPLHALNPVRLDYVAVRVA-------- 53

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGG+LSE +AR+GA VT ID   + +K+ARLH+ L+     ++Y 
Sbjct: 54  ----LPGARVLDVGCGGGLLSEAMARLGAQVTAIDLAPELVKVARLHS-LE-SGVQVDYR 107

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  EQ   FDAV   E++EHV DP     + ++L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAEQPGSFDAVTCMEMLEHVPDPLAIIHACASLLKPGGTLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+I   LPKGTH +  F+ P EL   L+ A + +++++G +Y P   R  LS  
Sbjct: 168 LAVVGAEYIARLLPKGTHHYKDFIKPSELAAWLRTAELQLQDVSGMLYEPWRNRARLSSR 227

Query: 334 ISVNFIAFGTK 344
             VN++A   K
Sbjct: 228 TEVNYLACAVK 238


>gi|297250661|ref|ZP_06864760.2| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           polysaccharea ATCC 43768]
 gi|296838367|gb|EFH22305.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           polysaccharea ATCC 43768]
          Length = 243

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/235 (41%), Positives = 140/235 (59%), Gaps = 19/235 (8%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEGLNIVD 166
           E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G  ++D
Sbjct: 17  EIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------GKRVLD 62

Query: 167 VGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-E 224
           VGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L E E
Sbjct: 63  VGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLAEAE 121

Query: 225 QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L 
Sbjct: 122 PHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLK 181

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 182 FVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 236


>gi|417850772|ref|ZP_12496613.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. gallicida str. Anand1_poultry]
 gi|338220374|gb|EGP05894.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. gallicida str. Anand1_poultry]
          Length = 242

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQ-----------QANGLTGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLRIDYQQITIEEFLQN 110

Query: 218 AEKLVEE---QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E   + KFD +   E++EHV DP+        L    G    STINR+++A+A 
Sbjct: 111 QTALFAERGEKEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|15602705|ref|NP_245777.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|425063529|ref|ZP_18466654.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. gallicida X73]
 gi|17368776|sp|Q9CMI6.1|UBIG_PASMU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|12721148|gb|AAK02924.1| UbiG [Pasteurella multocida subsp. multocida str. Pm70]
 gi|404383092|gb|EJZ79549.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. gallicida X73]
          Length = 242

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQ-----------QANGLTGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLHIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L    G    STINR+++A+A 
Sbjct: 111 QTALFAERGEDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|110834614|ref|YP_693473.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax borkumensis
           SK2]
 gi|110647725|emb|CAL17201.1| 3-demethylubiquinone-9 3-O-methyltransferase [Alcanivorax
           borkumensis SK2]
          Length = 252

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 144/239 (60%), Gaps = 15/239 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKF+A+A+ WWD    ++PLH +NP RL +I   +    +K            ++D+
Sbjct: 27  GEIAKFNALAEQWWDPNSQFRPLHDINPLRLNYIDERVSLPSKK------------VIDI 74

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGG+LSE +AR GA VTGID  E  + +AR+HA+       +EY    AE++ E++  
Sbjct: 75  GCGGGLLSEGMARRGAEVTGIDMGEAPLAVARIHAEH--AGVAVEYLQIPAEQIAEQRAG 132

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DP+   ++ + L    G    STINR+ +A+  AI+ AE++L  L
Sbjct: 133 QYDVVTCLEMLEHVPDPSSVIRACATLVKPGGQVFFSTINRNPKAFMFAIVGAEYVLRLL 192

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           P+GTH+++  + P EL    + A +DV++ AG VYNPLT  + L+ D+SVN++    K 
Sbjct: 193 PRGTHEYAKLIKPSELAGWARDAGLDVQDTAGMVYNPLTQVYKLNRDVSVNYLMHARKG 251


>gi|333900205|ref|YP_004474078.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fulva 12-X]
 gi|333115470|gb|AEF21984.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fulva 12-X]
          Length = 232

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 145/240 (60%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDKESEFKPLHEINPLRVNWIDERAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A+ GA+VTGID  E  + +ARLH  L+     ++Y   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMAQRGASVTGIDMGEAPLAVARLH-QLESGVE-VDYRQITAEA 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DP+   ++   L    G    STINR+ +AY  A+I A
Sbjct: 106 MAEEMPGQFDVVTCLEMLEHVPDPSSVIRACHKLVKPGGQVFFSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    ++A ++ K++ G  YNPLT  + L++D+ VN++
Sbjct: 166 EYILRLLPRGTHDFKKFIRPSELGAWSRQAGLETKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|152996873|ref|YP_001341708.1| ubiquinone biosynthesis O-methyltransferase [Marinomonas sp. MWYL1]
 gi|150837797|gb|ABR71773.1| ubiquinone biosynthesis O-methyltransferase [Marinomonas sp. MWYL1]
          Length = 240

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/260 (40%), Positives = 147/260 (56%), Gaps = 35/260 (13%)

Query: 85  NTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRST 144
           NT +N+  LN              E+AKF A+A  WWD E  +KPLH +NP R  +I   
Sbjct: 3   NTQQNNVDLN--------------EVAKFEALASRWWDTENEFKPLHDINPLRTDYISD- 47

Query: 145 LCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD- 203
                      A   +G  ++DVGCGGGILSE +A++GA V GID  E  + +A+LH + 
Sbjct: 48  ----------RANGLQGKKVIDVGCGGGILSEAMAKLGANVKGIDMGEAPLAVAKLHKEE 97

Query: 204 --LDPETSTIEYCCTTAEKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGAT 260
             LD     I+Y   TAE++ + E  ++D V   E++EHV DP+   K+   L    G  
Sbjct: 98  SKLD-----IDYEKITAEEIAQREAGQYDVVTCLEMLEHVPDPSSVIKACMTLVKPGGHV 152

Query: 261 VISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFV 320
             STINR+ +AY  AI+ AE+IL  LPKGTH ++ F+ P EL    ++A ++V  M G  
Sbjct: 153 FFSTINRNPKAYLFAIVGAEYILKMLPKGTHDYAKFIQPAELNNYARQAGLEVTHMTGMT 212

Query: 321 YNPLTGRWSLSD-DISVNFI 339
           YNPLT  + L+D D+SVN++
Sbjct: 213 YNPLTKIYKLNDKDVSVNYM 232


>gi|409393716|ref|ZP_11245016.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Chol1]
 gi|409393859|ref|ZP_11245142.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Chol1]
 gi|409121697|gb|EKM97763.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Chol1]
 gi|409121858|gb|EKM97920.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Chol1]
          Length = 232

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 104/238 (43%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I          D + A    G 
Sbjct: 2   SNVDNAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWI----------DEHVA--LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGAQVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEDLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +   +FD V   E++EHV DPA   ++  AL    G    STINR+ +AYA AII AE+
Sbjct: 108 AQSPEQFDVVTCLEMLEHVPDPASVIRACCALVKPGGQVFFSTINRNPKAYALAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++
Sbjct: 168 LLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIVGLTYNPLTKFYKLSADVDVNYM 225


>gi|421907873|ref|ZP_16337739.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha704]
 gi|393291009|emb|CCI73747.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha704]
          Length = 242

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+TP +L  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFITPADLARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|294671163|ref|ZP_06736017.1| hypothetical protein NEIELOOT_02871 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307101|gb|EFE48344.1| hypothetical protein NEIELOOT_02871 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 239

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 16/246 (6%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           N+    P+ + + E+ KFS +AD WWD E  +KPLH +NP RL +I          D ++
Sbjct: 2   NQTEQQPN-VDNEEIDKFSRLADKWWDKESEFKPLHDINPIRLDYI----------DRFA 50

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                G  ++DVGCGGGILSE +A  GA  V GID  EK+++ A  HA +  +   I Y 
Sbjct: 51  G--LAGKKVLDVGCGGGILSESMADRGAAEVLGIDLAEKSLQTAENHAKMR-QLDNIAYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
           C + E L  E  + +D V   E++EHV DPA   +S + L    G    STINR+ ++Y 
Sbjct: 108 CVSVEDLAAETPQAYDVVTCMEMMEHVPDPAAIIRSCARLAKPGGMVFFSTINRNPKSYL 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE+IL  +PKGTH W  F+TP EL  + ++A +D+ +  G  YNPL   +SLS+ 
Sbjct: 168 HAILGAEYILKLVPKGTHDWQKFITPAELARMCRQAGLDIADSKGLTYNPLLKHYSLSNK 227

Query: 334 ISVNFI 339
           + VN++
Sbjct: 228 VDVNYM 233


>gi|386834007|ref|YP_006239322.1| ubiquinone biosynthesis O-methyltransferase [Pasteurella multocida
           subsp. multocida str. 3480]
 gi|385200708|gb|AFI45563.1| ubiquinone biosynthesis O-methyltransferase [Pasteurella multocida
           subsp. multocida str. 3480]
          Length = 242

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQ-----------QANGLTGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLRIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L    G    STINR+++A+A 
Sbjct: 111 QTALFAERGEDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|260913651|ref|ZP_05920127.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella dagmatis
           ATCC 43325]
 gi|260632190|gb|EEX50365.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella dagmatis
           ATCC 43325]
          Length = 242

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 139/246 (56%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYISQ-----------QANGLMGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            I+DVGCGGGILSE +A+ GA VTGID     +++A+ HA     ++D +  TIE     
Sbjct: 51  KILDVGCGGGILSESMAKQGAKVTGIDMSSAPLEVAKKHALESGLNIDYQRITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E     KFD +   E++EHV DP+    S   L   +G    STINR+++A+  
Sbjct: 111 HTALYTENGSAEKFDIITCMEMLEHVPDPSSIIASSKQLLKPDGMIFFSTINRTLKAWML 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            +I AE++L  LPKGTH +  F+ P EL+     A +   +MAG+ YNPLTG + L+ D+
Sbjct: 171 VVIGAEYMLKMLPKGTHDYEKFIKPAELLGWCDDAKLTCSDMAGYHYNPLTGNFWLNKDV 230

Query: 335 SVNFIA 340
           SVN++A
Sbjct: 231 SVNYMA 236


>gi|424057457|ref|ZP_17794974.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           nosocomialis Ab22222]
 gi|425740819|ref|ZP_18858985.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-487]
 gi|445433086|ref|ZP_21439629.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC021]
 gi|407440990|gb|EKF47507.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           nosocomialis Ab22222]
 gi|425494427|gb|EKU60631.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-487]
 gi|444758003|gb|ELW82511.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC021]
          Length = 237

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVKTG 236


>gi|121635687|ref|YP_975932.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           FAM18]
 gi|120867393|emb|CAM11165.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           FAM18]
          Length = 249

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 18  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 63

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 64  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 122

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 123 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAA 182

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 183 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 242


>gi|254474654|ref|ZP_05088040.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ruegeria sp. R11]
 gi|214028897|gb|EEB69732.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ruegeria sp. R11]
          Length = 208

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/201 (47%), Positives = 131/201 (65%), Gaps = 2/201 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  +E+AKF A+A  WWD  G +KPLH LNP RL +I   +   F +D  S  PF GL
Sbjct: 6   STVDPSEIAKFEAMAAEWWDPTGKFKPLHMLNPCRLDYITQQIAGEFDRDLSSDAPFAGL 65

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGG+LSEP+AR+GA V G DA   NI +A++HA+      +I+Y  TTAE L 
Sbjct: 66  RLLDIGCGGGLLSEPMARLGADVVGADAAAGNIPVAQIHAEQS--GLSIDYRHTTAEALA 123

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E   +FD V+  EV+EHVADP  +  +   L    G  + STINR+ ++YA AI  AE +
Sbjct: 124 EAGEQFDVVLNMEVVEHVADPLSYLTATQQLLKPGGLQICSTINRNPKSYAMAIFGAEVV 183

Query: 283 LHWLPKGTHQWSSFLTPEELV 303
           + WLP+GTH+WS F+TP  +V
Sbjct: 184 MRWLPRGTHEWSKFITPGRVV 204


>gi|171057645|ref|YP_001789994.1| 3-demethylubiquinone-9 3-methyltransferase [Leptothrix cholodnii
           SP-6]
 gi|254789991|sp|B1Y2L3.1|UBIG_LEPCP RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|170775090|gb|ACB33229.1| ubiquinone biosynthesis O-methyltransferase [Leptothrix cholodnii
           SP-6]
          Length = 235

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 142/233 (60%), Gaps = 13/233 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WWD E  ++PLH +NP RL +I  T+ +            +GL ++DVG
Sbjct: 8   ELAKFSELAHKWWDPESEFRPLHQINPLRLNWIEQTVGK-----------LDGLKVLDVG 56

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKLVEEQRK 227
           CGGGILSE +A+ GA V GID  E+++K+A+LHA L+   + +EY          E+  +
Sbjct: 57  CGGGILSEAMAQRGAQVLGIDLAERSLKVAQLHA-LESGQTRVEYREIAAEALAAEQPAR 115

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++ S L    G   +STINR+ +++  AI+ AE++L  LP
Sbjct: 116 YDVVTCMEMVEHVPDPASIVQACSQLVKPGGWVFLSTINRNPKSFLLAIVGAEYVLKMLP 175

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            GTH+++ F+ P EL+   +   +D++   G  YNPLT R+ LS D SVN++ 
Sbjct: 176 AGTHEYAKFIRPSELLRWCRDTGLDLRHTRGMEYNPLTRRYWLSADTSVNYLV 228


>gi|453331304|dbj|GAC86883.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter
           thailandicus NBRC 3255]
          Length = 251

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 100/248 (40%), Positives = 144/248 (58%), Gaps = 15/248 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG- 161
           SS+  +E+A FSA+A  WW+  GP  PLHA+NP R  ++ S           S +P EG 
Sbjct: 14  SSVSDSEIAHFSALAKDWWNPRGPMAPLHAMNPLRTDWVASRTT--------SLKPSEGK 65

Query: 162 -LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTT 217
            L+++D+GCG G+ SE  A++G    G+DA    I+ AR H     L P+ + + Y   +
Sbjct: 66  RLSLLDIGCGAGLASEAFAKLGFETLGLDASPDGIEAARAHQATYPLPPKAAPLSYRNGS 125

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE LV+E  +FD V A EVIEHV DP +F   L+ LT   G   +ST++R+ R++A A +
Sbjct: 126 AEDLVDEGAEFDVVSALEVIEHVNDPQDFLHMLATLTRPGGMVAVSTMSRTPRSFAMAKL 185

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LP GTH W  F+ PEEL  + + A + + ++AG  Y P   RW  + D  VN
Sbjct: 186 GAEYLLRMLPVGTHDWKKFIKPEELAAMARNAGLRMTDIAGMSYLP--PRWRTTRDTGVN 243

Query: 338 FIAFGTKN 345
           +IA  TK 
Sbjct: 244 YIAMFTKG 251


>gi|421852072|ref|ZP_16284763.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
 gi|371479763|dbj|GAB29966.1| 3-demethylubiquinone-9 3-methyltransferase [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
          Length = 246

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 145/251 (57%), Gaps = 12/251 (4%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +  APSS+   E+A+FSA+AD WWD  GP +PLHA+N  R+ +      RH    P   R
Sbjct: 5   REEAPSSVSSEEIARFSALADKWWDPTGPMRPLHAMNGLRIEWA----SRHL---PLRGR 57

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETSTIEYC 214
                +++D+GCG G+ SE LA+ G  V G+DA    I  A+ H + +P    + T+ Y 
Sbjct: 58  KSRKPHVLDIGCGAGLASEALAKAGYDVLGLDASANGIAAAQAHLEANPLPAGSGTLHYR 117

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             +AE+LV E  KFDAV+A E+IEHV DP  F   L+ L  + G  ++ST+NR++R+ A 
Sbjct: 118 QGSAEELVAEHAKFDAVMALEIIEHVTDPEAFMIMLAQLVDANGTVIVSTMNRTLRSLAV 177

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
             I AE++L  LP GTH+W  F+ P EL    + A + +  ++G    P  G W  + D+
Sbjct: 178 GKIGAEYLLRLLPVGTHEWRKFIQPSELGRYARAAGLRMVAVSGMA--PSIGSWKETRDL 235

Query: 335 SVNFIAFGTKN 345
            +N+IA   K+
Sbjct: 236 GINYIAAFKKD 246


>gi|421560084|ref|ZP_16005949.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 92045]
 gi|402334169|gb|EJU69463.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 92045]
          Length = 238

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P +L  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 231


>gi|220934702|ref|YP_002513601.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
 gi|219996012|gb|ACL72614.1| 3-demethylubiquinone-9 3-O-methyltransferase [Thioalkalivibrio
           sulfidophilus HL-EbGr7]
          Length = 237

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 138/239 (57%), Gaps = 15/239 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E++KF  +A  WWD EG +KPLH +NP RL ++                P  G  ++DVG
Sbjct: 13  EVSKFDDLAHRWWDPEGEFKPLHEINPLRLDYVERRA------------PLAGARVLDVG 60

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK- 227
           CGGGIL+E +AR GATVTGID     +++AR+H  L      ++Y     E+L EE    
Sbjct: 61  CGGGILAESMARRGATVTGIDMASGPLEVARMH--LLESGLEVDYRQMPVEQLAEEMPGA 118

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + + L    G    STINR+ RA+  AI+ AE++L  LP
Sbjct: 119 FDVVTCMEMLEHVPDPASVVAACARLVKPGGHVFFSTINRNPRAFLFAIVGAEYLLRLLP 178

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           +GTH+++ F+ P EL   ++ A ++ + + G  YNPLT  + L DD+ VN++   T+ S
Sbjct: 179 RGTHEYARFIKPSELNRWVRAAGLESRHVGGLSYNPLTREYRLDDDVQVNYLMHTTRES 237


>gi|421564128|ref|ZP_16009937.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2795]
 gi|402339059|gb|EJU74280.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM2795]
          Length = 238

 Score =  187 bits (476), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+TP +L  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFITPADLARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|121605682|ref|YP_983011.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas
           naphthalenivorans CJ2]
 gi|120594651|gb|ABM38090.1| 3-demethylubiquinone-9 3-methyltransferase [Polaromonas
           naphthalenivorans CJ2]
          Length = 238

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 138/232 (59%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WWD +  ++PLH +NP RL +I   +               GL ++DVG
Sbjct: 11  ELAKFSDLAHRWWDKDSEFRPLHEINPLRLDWIDGLVS------------LNGLRVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL++ +AR GA V GID   K +K+A+LHA L+ +T  +EY   +AE L  EQ   
Sbjct: 59  CGGGILADSMARKGAAVLGIDLASKALKVAQLHA-LEAQTQGVEYREVSAEALAAEQPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + +AL    G    STINR+ +A+  AI+ AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVNACAALVKPGGHVFFSTINRNAKAFLFAIVGAEYLLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH+++  + P EL    +  ++D  E  G  YNPLT  + LS D  VN++
Sbjct: 178 RGTHEYAKLIKPSELARYCRVVNLDFLETKGMEYNPLTRHYWLSADTGVNYL 229


>gi|157803509|ref|YP_001492058.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia canadensis
           str. McKiel]
 gi|166201217|sp|A8EY40.1|UBIG_RICCK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|157784772|gb|ABV73273.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia canadensis
           str. McKiel]
          Length = 236

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 137/244 (56%), Gaps = 10/244 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+            L
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGDFGILHCINPIRLEYIIEKITSHYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A        I Y  +T E+L 
Sbjct: 55  EILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + +D VI  EVIEHV +  +F  +L       G  +ISTINR  +AY   II AE+I
Sbjct: 112 KSNKLYDVVICLEVIEHVENVQQFILNLVQHIKPNGIAIISTINRMKKAYILGIIVAEYI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L W+PK TH +S FL P E+  +L    I++KE+ G +Y+     W LSD+I VN+  + 
Sbjct: 172 LGWVPKNTHNYSKFLKPSEIYEMLTDTGIEIKELKGLIYDMAKNEWKLSDNIEVNYFMYL 231

Query: 343 TKNS 346
            +N+
Sbjct: 232 ERNT 235


>gi|425747166|ref|ZP_18865181.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-323]
 gi|425484175|gb|EKU50588.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-323]
          Length = 237

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 136/236 (57%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL ++   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWVDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA  D     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVVGIDMGEAPLAVARLHAQQD-NVENIEYRQIPVEQLAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|429214714|ref|ZP_19205877.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas sp. M1]
 gi|428155000|gb|EKX01550.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas sp. M1]
          Length = 232

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 21/241 (8%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R++L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERASLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAE 219
           G  ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH     E+   +EY   TAE
Sbjct: 48  GKKVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH---QLESGVPVEYRRITAE 104

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           +L EE   +FD +   E++EHV DPA   ++   +    G    STINR+ +AY  AI+ 
Sbjct: 105 QLAEEMPGQFDVITCLEMLEHVPDPASVIRACHKMVKPGGQVFFSTINRNPKAYLFAIVG 164

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE+++  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+DD+ VN+
Sbjct: 165 AEYVMRLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTRHYKLADDVDVNY 224

Query: 339 I 339
           +
Sbjct: 225 M 225


>gi|398386307|ref|ZP_10544310.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium sp. AP49]
 gi|397718675|gb|EJK79261.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium sp. AP49]
          Length = 243

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 142/231 (61%), Gaps = 6/231 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E A F  +A  WWD +G    LH LNP RLA+IR+ + RH+  D +  RP  G   +DVG
Sbjct: 12  EAAHFGTMAADWWDPKGSSAMLHKLNPVRLAYIRAAIDRHWDSDDHGFRPLSGKRALDVG 71

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+EPLAR+GA+VTG+DA  +NI +A  HA    +   I Y  T  E++ +    +
Sbjct: 72  CGAGLLAEPLARLGASVTGLDAAPENIAVASAHA--RGQGLAINYRATPVEQISDGD--Y 127

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V + EVIEHVADPA F ++L+A    +G  ++ST NR+  +    I   E I   +PK
Sbjct: 128 DLVTSMEVIEHVADPAAFVRALAAKLAPDGLMILSTPNRTPMSRLAMITIGESI-GGIPK 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH W+ F+TPEEL  +L  A ++V + +G  ++P  G ++LS + ++N++
Sbjct: 187 GTHDWAKFITPEELTALLDDAGLEVTDSSGLAFDPARG-FTLSANKAINYL 236


>gi|385337246|ref|YP_005891119.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           WUE 2594]
 gi|421543283|ref|ZP_15989378.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM255]
 gi|433476460|ref|ZP_20433791.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 88050]
 gi|433518553|ref|ZP_20475288.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 96023]
 gi|433524926|ref|ZP_20481578.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97020]
 gi|433529133|ref|ZP_20485738.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3652]
 gi|433531308|ref|ZP_20487885.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3642]
 gi|433533344|ref|ZP_20489900.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2007056]
 gi|433535525|ref|ZP_20492050.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2001212]
 gi|319409660|emb|CBY89961.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase;
           DHHB methyltransferase) [Neisseria meningitidis WUE
           2594]
 gi|389606774|emb|CCA45685.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha522]
 gi|402314929|gb|EJU50496.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM255]
 gi|432207318|gb|ELK63308.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 88050]
 gi|432251073|gb|ELL06445.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 96023]
 gi|432257428|gb|ELL12728.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 97020]
 gi|432263487|gb|ELL18704.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3652]
 gi|432263758|gb|ELL18969.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis NM3642]
 gi|432264658|gb|ELL19857.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2007056]
 gi|432269115|gb|ELL24278.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2001212]
          Length = 238

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 231


>gi|398964530|ref|ZP_10680348.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM30]
 gi|398148248|gb|EJM36932.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM30]
          Length = 232

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRIAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|422647004|ref|ZP_16710135.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|330960549|gb|EGH60809.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 232

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A+I AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL +  + A ++VK++ G  YNPLT  + L+ D+SVN++
Sbjct: 168 ILGLLPRGTHDFKKFIRPSELGVWSRDAGLEVKDIIGLTYNPLTKHYKLASDVSVNYM 225


>gi|359435065|ref|ZP_09225295.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20652]
 gi|357918278|dbj|GAA61544.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20652]
          Length = 236

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 147/244 (60%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKVPAEEF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +   +FD +   E++EHV DPA    +++AL         ST+N++ +AY  AI+ AE
Sbjct: 111 ATQYPERFDVITCMEMLEHVPDPASIIHAVAALAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P+GTH    F+ P +L+   ++A + V+   G  YNPL+ +++L+ D+SVN+I 
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASTGLSYNPLSKQYTLNSDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|349574766|ref|ZP_08886700.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria shayeganii
           871]
 gi|348013640|gb|EGY52550.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria shayeganii
           871]
          Length = 240

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 136/233 (58%), Gaps = 13/233 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KFS +A  WWD  G +KPLH +NP RL F+R             A    G  ++DV
Sbjct: 11  AEIDKFSQLAHQWWDKTGEFKPLHDINPLRLQFVRE-----------HAGGLAGKTVLDV 59

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E LA      TGID  EK++++A LHA+    T+ I Y C + E L  E   
Sbjct: 60  GCGGGILTESLAAEAEHATGIDMAEKSLQVAALHAEQQGVTN-IAYRCVSVEDLAAESPA 118

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L   EG    ST+NR+ ++Y  AI+AAE++L  +
Sbjct: 119 SFDVVTCMEMLEHVPDPASVIRACAKLVKPEGVVFFSTLNRNTKSYLQAIVAAEYLLGLV 178

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            KGTH W  F+TP EL  + ++A +++   +G  YN LT R+ L D + VN++
Sbjct: 179 SKGTHTWQKFITPAELARMCRQARLELAATSGMSYNLLTQRYFLCDSLDVNYL 231


>gi|388257210|ref|ZP_10134390.1| 3-demethylubiquinone-9 3-methyltransferase [Cellvibrio sp. BR]
 gi|387939414|gb|EIK45965.1| 3-demethylubiquinone-9 3-methyltransferase [Cellvibrio sp. BR]
          Length = 234

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/240 (41%), Positives = 141/240 (58%), Gaps = 14/240 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKF A+A  WWD    +KPLH +NP R  FI         + P + R      ++DV
Sbjct: 7   AEIAKFEALASRWWDKNSEFKPLHDINPLRANFID-------ERSPVAQR-----TVIDV 54

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGIL+E LA+ GA VTGID  E  + +ARLHA L+          T  +K  +    
Sbjct: 55  GCGGGILAESLAQRGAQVTGIDMGEAPLAVARLHA-LESGVELTYEQITAEDKATQMPGA 113

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L  + G    STINR+ ++YA AI+ AE+IL  LP
Sbjct: 114 FDLVTCMEMLEHVPDPASVVRACAQLVKAGGDVYFSTINRNPKSYAFAIVGAEYILKLLP 173

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTKNS 346
           KGTH++S F+ P EL   L+ A ++++ M G  YNP+T  + L+ +D+SVN++    K S
Sbjct: 174 KGTHEYSKFIRPSELAQWLRAAGLELQSMTGMTYNPITKHYKLNPNDVSVNYLMHAKKVS 233


>gi|260553000|ref|ZP_05825915.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|417876069|ref|ZP_12520864.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH2]
 gi|260405242|gb|EEW98739.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|342224215|gb|EGT89264.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH2]
          Length = 237

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 136/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G +YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLLYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|296135985|ref|YP_003643227.1| hypothetical protein Tint_1515 [Thiomonas intermedia K12]
 gi|295796107|gb|ADG30897.1| hypothetical protein Tint_1515 [Thiomonas intermedia K12]
          Length = 236

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 144/232 (62%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD  G ++PLH LNP RL +I+  +               G ++VD+G
Sbjct: 12  EIDKFSVLAHRWWDEHGEFRPLHLLNPHRLRWIQDHVG------------LGGKSVVDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGILSE +A  GA VTGID  + ++++ARLHA LD +   I+Y   +AE+L  E   +
Sbjct: 60  CGGGILSESMAAAGAKVTGIDLADASLQVARLHA-LDAQLD-IDYRLVSAERLATEAAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   +S +AL    G   +ST+NR+ +AY  AI+ AE++L  LP
Sbjct: 118 FDVVTCMEMLEHVPDPASIIQSSAALVRPGGWVFVSTLNRNAKAYLFAILGAEYLLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH ++ FL P E+  + +R  ++  ++AG  + PLT R+ ++ D SVN++
Sbjct: 178 KGTHDYAKFLQPSEISAMGRRCGLETADIAGLEFQPLTQRFRITHDPSVNYL 229


>gi|57239140|ref|YP_180276.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58579091|ref|YP_197303.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia ruminantium
           str. Welgevonden]
 gi|57161219|emb|CAH58134.1| putative 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417717|emb|CAI26921.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia ruminantium
           str. Welgevonden]
          Length = 241

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 140/242 (57%), Gaps = 6/242 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   EL KFS I+D WW+  GP KP+H ++P R+ +I +     +         F+ L
Sbjct: 3   STVNQNELLKFSKISDKWWNENGPLKPMHMMHPVRMQYIIN-----YINKVMPNVDFKSL 57

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++DVGCGGG+LSE +AR+   V GIDA ++ I +A+ HA L      I Y C   E LV
Sbjct: 58  SVLDVGCGGGLLSESMARLNMRVCGIDASKETINVAQKHA-LVHGIHNISYHCMNIEDLV 116

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
             Q K+D +   EV+EHV +   F  S+S+L    G   +ST+NR++++    +I AE+I
Sbjct: 117 NIQEKYDIITVMEVVEHVDNLPLFINSISSLLNDNGIIFLSTLNRNIKSLLCGVICAEYI 176

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L+ +P GTHQWS F+ P E+  +     + ++E+ G  +N +     LS DISVN+I   
Sbjct: 177 LNLVPYGTHQWSRFVKPSEIANLFLPNGVVLQEIVGVSFNLIKNCLQLSKDISVNYILAA 236

Query: 343 TK 344
            K
Sbjct: 237 QK 238


>gi|421589379|ref|ZP_16034529.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase, partial
           [Rhizobium sp. Pop5]
 gi|403705678|gb|EJZ21205.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase, partial
           [Rhizobium sp. Pop5]
          Length = 192

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 94/192 (48%), Positives = 127/192 (66%), Gaps = 2/192 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
            +A S++  +E+ +FSA+A  WW   G +KPLH  NP RLA+IR   C +F +DP SARP
Sbjct: 3   ETARSTIDQSEVDRFSAMAAEWWSPTGKFKPLHKFNPVRLAYIRDKACENFGRDPKSARP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            EGL ++D+GCGGG+LSEP+ARMGA+V G D  EKNI IA  HA       +++Y   TA
Sbjct: 63  LEGLRVLDIGCGGGLLSEPVARMGASVVGADPSEKNIGIASTHA--KASGVSVDYRAVTA 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L +    FD V+  EV+EHVAD   F  + + +    G   ++TINR+M+A A AI A
Sbjct: 121 EELADAGETFDIVLNMEVVEHVADVEFFTTTCAKMVRPGGLIFVATINRTMKAAALAIFA 180

Query: 279 AEHILHWLPKGT 290
           AE+IL WLP+GT
Sbjct: 181 AENILRWLPRGT 192


>gi|389797716|ref|ZP_10200756.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           sp. 116-2]
 gi|388446790|gb|EIM02810.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           sp. 116-2]
          Length = 234

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 139/232 (59%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F ++A  WWD +G  +PLH LNP R A++        R D        G N+ DVG
Sbjct: 10  EIARFDSLAARWWDPDGESRPLHDLNPVRAAYVA------VRVD------LRGANVADVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKLVEEQRK 227
           CGGG+LSE LAR GA VTGID  EK I +A+LH  L      ++Y   ++AE    E   
Sbjct: 58  CGGGLLSEALARAGAKVTGIDLGEKVIDVAKLH--LHESGLDVDYRVQSSAELAAAEPAG 115

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV   E+IEHV DPA     L+AL    G   +ST+NR+  A+  AI+ AE+++  LP
Sbjct: 116 FDAVCCMELIEHVPDPAALVNDLAALLKPGGRLFMSTLNRTPAAFGAAIVGAEYVMRLLP 175

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ FL P EL  +L+ A +++++++G  YNPL  +  LS   +VN++
Sbjct: 176 RGTHHYAQFLKPSELGRLLRHAGLELEDVSGLAYNPLNRKARLSSTTAVNYV 227


>gi|224824520|ref|ZP_03697627.1| ubiquinone biosynthesis O-methyltransferase [Pseudogulbenkiania
           ferrooxidans 2002]
 gi|347538758|ref|YP_004846182.1| ubiquinone biosynthesis O-methyltransferase [Pseudogulbenkiania sp.
           NH8B]
 gi|224603013|gb|EEG09189.1| ubiquinone biosynthesis O-methyltransferase [Pseudogulbenkiania
           ferrooxidans 2002]
 gi|345641935|dbj|BAK75768.1| ubiquinone biosynthesis O-methyltransferase [Pseudogulbenkiania sp.
           NH8B]
          Length = 233

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++   EL KFS +A  WWD E  +KPLH +NP RL +I  R+ L               
Sbjct: 2   SNVDELELDKFSQLAHKWWDKESEFKPLHEINPLRLGYIDDRAGLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGIL+E +A  GA VTGID  +K++K+A+LH+ L+   S ++Y C   E 
Sbjct: 48  GKTVLDVGCGGGILAESMALKGANVTGIDLAKKSLKVAQLHS-LESGVS-VDYRCVAVET 105

Query: 221 LVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE    FD V   E++EHV DP    +S S L    G    ST+NR+ ++Y  A++AA
Sbjct: 106 LAEELPGHFDVVTCMEMLEHVPDPESVVRSCSRLVKPGGWVFFSTLNRNAKSYLLAVLAA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L  LP+GTH++  F+ P EL  I + A +++++++G  YNPLT  + L +D  VN++
Sbjct: 166 EYVLGMLPRGTHEYGRFIKPSELGRIARHAGLELEDISGMSYNPLTRTYVLGNDTGVNYL 225


>gi|229589161|ref|YP_002871280.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           SBW25]
 gi|312959695|ref|ZP_07774212.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           WH6]
 gi|388471646|ref|ZP_10145855.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas synxantha
           BG33R]
 gi|259563543|sp|C3K6J1.1|UBIG_PSEFS RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|229361027|emb|CAY47889.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           SBW25]
 gi|311286412|gb|EFQ64976.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           WH6]
 gi|388008343|gb|EIK69609.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas synxantha
           BG33R]
          Length = 232

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|408482976|ref|ZP_11189195.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           R81]
          Length = 232

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|385341126|ref|YP_005894997.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           M01-240149]
 gi|416174836|ref|ZP_11609315.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis OX99.30304]
 gi|416189329|ref|ZP_11615251.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M0579]
 gi|325129341|gb|EGC52176.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis OX99.30304]
 gi|325135425|gb|EGC58045.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M0579]
 gi|325201332|gb|ADY96786.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M01-240149]
          Length = 242

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|395499791|ref|ZP_10431370.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           PAMC 25886]
          Length = 232

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 144/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE+L 
Sbjct: 50  KVLDVGCGGGILSESMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEELA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++  ++    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACFSMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|58617148|ref|YP_196347.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia ruminantium
           str. Gardel]
 gi|58416760|emb|CAI27873.1| 3-demethylubiquinone-9 3-methyltransferase [Ehrlichia ruminantium
           str. Gardel]
          Length = 241

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 140/242 (57%), Gaps = 6/242 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   EL KFS I+D WW+  GP KP+H ++P R+ +I +     +         F+ L
Sbjct: 3   STVNQNELLKFSKISDKWWNENGPLKPMHMMHPVRMQYIIN-----YINKVMPNVDFKSL 57

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +++DVGCGGG+LSE +AR+   V GIDA ++ I +A+ HA L      I Y C   E LV
Sbjct: 58  SVLDVGCGGGLLSESMARLNMRVCGIDASKETINVAQKHA-LVHGIHNISYHCMNIEDLV 116

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
             Q K+D +   E++EHV +   F  S+S+L    G   +ST+NR++++    +I AE+I
Sbjct: 117 NIQEKYDIITVMEIVEHVDNLPLFINSISSLLNDNGIIFLSTLNRNIKSLLCGVICAEYI 176

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L+ +P GTHQWS F+ P E+  +     + ++E+ G  +N +     LS DISVN+I   
Sbjct: 177 LNLVPYGTHQWSRFVKPSEIANLFLPNGVVLQEIVGVSFNLIKNCLQLSKDISVNYILAA 236

Query: 343 TK 344
            K
Sbjct: 237 QK 238


>gi|385324969|ref|YP_005879408.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           8013]
 gi|421539002|ref|ZP_15985173.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 93003]
 gi|261393356|emb|CAX50992.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase;
           DHHB methyltransferase) [Neisseria meningitidis 8013]
 gi|402315114|gb|EJU50680.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 93003]
          Length = 238

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|359441564|ref|ZP_09231457.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20429]
 gi|358036584|dbj|GAA67706.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas sp.
           BSi20429]
          Length = 236

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 146/244 (59%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTQGLFDKE---------- 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMGA VTGID  ++ + +A+LH+    ET   ++Y    AE  
Sbjct: 55  -TLDVGCGGGILSQSMARMGAKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKVPAEDF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +   +FD +   E++EHV DPA    +++AL         ST+N++ +AY  AI+ AE
Sbjct: 111 ATQYPERFDVITCMEMLEHVPDPASIIHAVAALAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P+GTH    F+ P +L+   ++A + V+   G  YNPL+ +++L+ D+SVN+I 
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASTGLSYNPLSKQYTLNSDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|385852112|ref|YP_005898627.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           M04-240196]
 gi|416185063|ref|ZP_11613295.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M13399]
 gi|416214894|ref|ZP_11623150.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M01-240013]
 gi|325133357|gb|EGC56022.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M13399]
 gi|325143588|gb|EGC65908.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M01-240013]
 gi|325206935|gb|ADZ02388.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M04-240196]
          Length = 242

 Score =  187 bits (474), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 EAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|398989437|ref|ZP_10692692.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM24]
 gi|399011093|ref|ZP_10713426.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM16]
 gi|398118431|gb|EJM08162.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM16]
 gi|398147662|gb|EJM36363.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM24]
          Length = 232

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|148252486|ref|YP_001237071.1| 3-demethylubiquinone-9 3-methyltransferase [Bradyrhizobium sp.
           BTAi1]
 gi|146404659|gb|ABQ33165.1| 3-demethylubiquinone-9 3-methyltransferase /2-octaprenyl-6-hydroxy
           phenol methylase [Bradyrhizobium sp. BTAi1]
          Length = 260

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 138/239 (57%), Gaps = 2/239 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
            PS++  AE+A+FS +A+ WW  +G +K +HA N  R++++   L     +D  +  P  
Sbjct: 17  GPSTVDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVSYLCDRLPALVGRDAAANLPLA 76

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL I+DVGCG GI++EPL+R+GA   GIDA E+N+ +A  HA    +++ + Y     E 
Sbjct: 77  GLEIIDVGCGAGIVTEPLSRLGADTLGIDASERNVLVAADHARR--QSALVAYRHALPED 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           LV E  + D V+  EV+EHVAD   F   ++ L    G  VI T+NR++ ++  AII AE
Sbjct: 135 LVAEGERADIVLTLEVVEHVADLGRFVGHVAELVRPGGILVIGTLNRTLTSFVKAIIGAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +IL WLP+GTH W  F+ P EL  +L        E      NPLT RW +    S N++
Sbjct: 195 YILGWLPRGTHDWRRFVKPAELEALLAPHRFSPLETVAVELNPLTMRWRIGGRPSTNYL 253


>gi|304388644|ref|ZP_07370706.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis ATCC 13091]
 gi|304337390|gb|EFM03562.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis ATCC 13091]
          Length = 243

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  ++DVG
Sbjct: 17  EIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKRVLDVG 64

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQR 226
           CGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L E E  
Sbjct: 65  CGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLAEAEPH 123

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++
Sbjct: 124 SFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFV 183

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 184 PKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 236


>gi|365092961|ref|ZP_09330038.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acidovorax sp.
           NO-1]
 gi|363414909|gb|EHL22047.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acidovorax sp.
           NO-1]
          Length = 236

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I S                 G  ++DV
Sbjct: 10  AELAKFSELAHRWWDPESEFRPLHQINPLRLDWINSQC------------SLAGKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +++A+LHA L+ +T+ +EY   + E L +EQ  
Sbjct: 58  GCGGGILADSMARKGADVLGIDLASKALRVAQLHA-LEAQTANVEYREISVEALAKEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV   E++EHV DP    ++ S L    G    STI+R+ +A+  AI+ AE++L+ L
Sbjct: 117 SFDAVTCMEMLEHVPDPESVVRACSELVKPGGWVFFSTIHRNAKAFLLAIVGAEYVLNML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++  + P EL    + A + V++  G  YNP+T R+ LS D  VN++
Sbjct: 177 PRGTHEYAKMIRPSELAAHCRSAGLHVQQTRGLEYNPITQRYWLSGDTGVNYL 229


>gi|359427522|ref|ZP_09218570.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter sp. NBRC
           100985]
 gi|358236939|dbj|GAB00109.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter sp. NBRC
           100985]
          Length = 237

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 135/236 (57%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVIDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  D     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGEAPLAVGRLHAQQD-NVQNIEYRQIPVEQLAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  +L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQSLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|406937625|gb|EKD71020.1| hypothetical protein ACD_46C00292G0001 [uncultured bacterium]
          Length = 235

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 139/247 (56%), Gaps = 15/247 (6%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H+   +    ELAKF+++A TWWD EG  K LH +NP RL +I   +             
Sbjct: 2   HNKAKNYDRDELAKFASLASTWWDPEGELKTLHQINPLRLQYIEEKIS------------ 49

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
                ++D+GCGGGIL+E +A  GA VTGID  +  I +A+LH  L      +EY C  A
Sbjct: 50  LANKTVIDIGCGGGILTESMAHRGAIVTGIDLNKAGIDVAKLH--LLESKENVEYLCMAA 107

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E + EE+  K+D V   E++EHV +PA    + + L    G    STINR  +AY  AI+
Sbjct: 108 EDVAEERAEKYDVVTCLEMLEHVPNPAAIVNACATLLKPGGHVFFSTINRHPKAYLFAIL 167

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE+ L  LPK TH ++ F+ P EL   ++ + +  +EM G  Y+P + ++ L+DD+SVN
Sbjct: 168 GAEYFLKLLPKNTHDYAKFIRPSELNSWIRHSQLHTQEMQGIAYHPFSQQFKLTDDLSVN 227

Query: 338 FIAFGTK 344
           ++   TK
Sbjct: 228 YLLHATK 234


>gi|433516554|ref|ZP_20473313.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2004090]
 gi|432250846|gb|ELL06225.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 2004090]
          Length = 238

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++   L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACVKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 231


>gi|225076984|ref|ZP_03720183.1| hypothetical protein NEIFLAOT_02036 [Neisseria flavescens
           NRL30031/H210]
 gi|224951737|gb|EEG32946.1| hypothetical protein NEIFLAOT_02036 [Neisseria flavescens
           NRL30031/H210]
          Length = 242

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/235 (42%), Positives = 138/235 (58%), Gaps = 15/235 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            E+AKFS IAD WWD  G +KPLH +NP RL +I          D Y+     G  ++DV
Sbjct: 16  GEIAKFSQIADKWWDKNGEFKPLHDINPLRLDYI----------DGYAG--LAGKRVLDV 63

Query: 168 GCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           GCGGGILSE +A+ GA  VTGID  EK+++ A  HA      + I+Y C   E L  EQ 
Sbjct: 64  GCGGGILSESMAKRGAEHVTGIDMAEKSLQTAAAHAAAQ-HVANIDYRCIRVEDLAAEQP 122

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV DP+   ++ + L   +G    STINR+ ++Y   I+ AE++L +
Sbjct: 123 HSFDVVTCMEMMEHVPDPSAIVQACAKLVKPDGMVFFSTINRNPKSYLHLIVGAEYLLKF 182

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +PKGTH W  F+TP EL  + ++A +D     G  YN L+GR+SL D   VN++ 
Sbjct: 183 VPKGTHDWKKFITPAELARMCRQAGLDTIGSKGMTYNLLSGRYSLCDSTEVNYMV 237


>gi|254515161|ref|ZP_05127222.1| 3-demethylubiquinone-9 3-O-methyltransferase [gamma proteobacterium
           NOR5-3]
 gi|219677404|gb|EED33769.1| 3-demethylubiquinone-9 3-O-methyltransferase [gamma proteobacterium
           NOR5-3]
          Length = 236

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 145/243 (59%), Gaps = 16/243 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  AE+AKF A+A  WWD +G ++PLH +NP R  +I S              P  G  
Sbjct: 6   NVDDAEIAKFEALAARWWDMDGEFRPLHEINPLRANWIDSR------------SPVAGQR 53

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL-V 222
           ++DVGCGGGIL+E +AR GA VTGID  E  + +ARLH  L+     + Y  +TAE+  +
Sbjct: 54  LLDVGCGGGILAESMARRGAEVTGIDMGEGPLSVARLH-QLESGVD-VHYQRSTAEEFAL 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E    FD V   E++EHV DP    ++ + +T   G    STINR+ +A+  AI+ AEHI
Sbjct: 112 ENPGHFDVVCCLEMLEHVPDPGAVIQACADMTRPGGNLYFSTINRNPKAFLFAIVGAEHI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAF 341
           L  LP GTH++  F+ P EL   L+ A++ ++ M G VYNPL+ R+ L+  D+SVNF+  
Sbjct: 172 LRLLPAGTHEYEKFIRPSELAQWLRDANLQLEGMTGLVYNPLSKRYRLNPSDVSVNFMVH 231

Query: 342 GTK 344
            +K
Sbjct: 232 ASK 234


>gi|34496486|ref|NP_900701.1| 3-demethylubiquinone-9 3-methyltransferase [Chromobacterium
           violaceum ATCC 12472]
 gi|39932503|sp|Q7NZ91.1|UBIG_CHRVO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|34102340|gb|AAQ58706.1| 3-demethylubiquinone-9 3-O-methyltransferase [Chromobacterium
           violaceum ATCC 12472]
          Length = 232

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 145/239 (60%), Gaps = 17/239 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KFS +A  WWD +  +KPLH +NP RL FI     RH            G 
Sbjct: 2   SNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFID----RH--------ASIAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            ++DVGCGGGIL+E +A  GA VTGID  +K++K+A+LH+    E+   I+Y C   E L
Sbjct: 50  KVLDVGCGGGILAESMALRGAQVTGIDLAKKSLKVAQLHS---LESGVPIDYRCVAVEDL 106

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             E    FDAV   E++EHV DP    ++ S L    G    ST+NR+ +AY  A++ AE
Sbjct: 107 AAEMPGAFDAVTCMEMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLLAVVGAE 166

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           ++L+ LP+GTH+++ FL P EL  + + A + ++ ++G  YNP+T  +SL+DD +VN++
Sbjct: 167 YVLNMLPRGTHEYARFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYL 225


>gi|70731667|ref|YP_261409.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           protegens Pf-5]
 gi|109895905|sp|Q4K8M4.1|UBIG_PSEF5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|68345966|gb|AAY93572.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas protegens
           Pf-5]
          Length = 232

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRSAGLTVKDIIGLTYNPLTKHYKLAPDVDVNYM 225


>gi|347817584|ref|ZP_08871018.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Verminephrobacter aporrectodeae subsp. tuberculatae
           At4]
          Length = 236

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 98/233 (42%), Positives = 140/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS +A  WWD E  ++PLH +NP RL +I   LC+             G  ++DV
Sbjct: 10  AELNKFSELAHRWWDPESEFRPLHQINPLRLDWIHG-LCQ-----------LSGKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA VTGID   K +++A LHA L+  T+ + Y   + E L +EQ  
Sbjct: 58  GCGGGILADAMARKGADVTGIDLASKALRVAELHA-LEARTANVRYREISVEALAKEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV  PA    + S L    G    STINR+ +A+  AI+ AE++L+ L
Sbjct: 117 GFDVVSCMEMLEHVPSPASVVHACSELVKPGGWVFFSTINRNAKAFMLAIVGAEYLLNML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++  + P EL    + A +D+++  G  YNPLT R+ LS D SVN++
Sbjct: 177 PRGTHEYARLIRPSELAANCRSAGLDIQKTKGLEYNPLTRRYWLSADTSVNYL 229


>gi|153207274|ref|ZP_01946038.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           'MSU Goat Q177']
 gi|165918676|ref|ZP_02218762.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           Q321]
 gi|212218182|ref|YP_002304969.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           CbuK_Q154]
 gi|226725538|sp|B6J5Y2.1|UBIG_COXB1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120576762|gb|EAX33386.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           'MSU Goat Q177']
 gi|165917611|gb|EDR36215.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           Q321]
 gi|212012444|gb|ACJ19824.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii
           CbuK_Q154]
          Length = 234

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WW+  G  KPLH +NP RL +I   +              +G +++DVG
Sbjct: 12  ELAKFSDLAQDWWNPAGKMKPLHLINPVRLKYIEQQIT------------LKGKHVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSE LA+ GA VTG+D  E  I +A+ HA+   +   I Y C   E L ++ ++F
Sbjct: 60  CGGGLLSEALAKHGAIVTGVDMSESLIDVAKNHAE--QQQLNINYQCQDIEILTKDAQRF 117

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPK
Sbjct: 118 DIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPK 177

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct: 178 GTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229


>gi|161869172|ref|YP_001598338.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           053442]
 gi|254804158|ref|YP_003082379.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha14]
 gi|421555721|ref|ZP_16001646.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 98008]
 gi|189037623|sp|A9M0C4.1|UBIG_NEIM0 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|161594725|gb|ABX72385.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           053442]
 gi|254667700|emb|CBA03563.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           alpha14]
 gi|402328697|gb|EJU64063.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 98008]
          Length = 238

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|187927864|ref|YP_001898351.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia pickettii
           12J]
 gi|187724754|gb|ACD25919.1| ubiquinone biosynthesis O-methyltransferase [Ralstonia pickettii
           12J]
          Length = 243

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 133/232 (57%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  IVDV
Sbjct: 16  GELEKFSELAHRWWDPNSEFKPLHEINPLRLGWIQSI------------APLAGKRIVDV 63

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 64  GCGGGILSESMARAGADVKGIDLSRKALRVADLHS-LEAGVTVDYEEIAAEALAAREPAS 122

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 123 FDVVTCMEMLEHVPDPASVVRACATLVKPGGYVFFSTIHRNAKAYLLAVIGAEYVLNMLP 182

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL   ++ A +  +EM G  YNP+TGR++L+ D SVN++
Sbjct: 183 RGTHDYAKFIRPSELSAFVRGAGLQAQEMCGLEYNPITGRYALTQDASVNYL 234


>gi|329118364|ref|ZP_08247073.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327465588|gb|EGF11864.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 242

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 139/240 (57%), Gaps = 15/240 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A+ WWD EG +KPLH +NP RL +I +                 G 
Sbjct: 8   ANVDRGEIDKFSRLAEKWWDTEGEFKPLHDINPFRLDYIDAK------------ADLAGK 55

Query: 163 NIVDVGCGGGILSEPLA-RMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
            ++DVGCGGGIL+E +A R  A VTGID  EK+++ A  HA +      + Y C + E L
Sbjct: 56  TVLDVGCGGGILAESMAWRGAAAVTGIDLAEKSLQTAEAHARMGG-VDNVRYRCVSVEDL 114

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             E    +D V   E++EHV DP    ++ + L   +G    STINR+ ++Y  AI+ AE
Sbjct: 115 AAENPHGYDVVTCMEMMEHVPDPTSVIRACAKLAKPDGMVFFSTINRNAKSYLHAILGAE 174

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L+ +PKGTH W  F+TP EL  + ++A +D+ ++ G  Y P   R+ LS D SVN++A
Sbjct: 175 YVLNLVPKGTHDWQKFITPSELARMCRQAGLDIADIKGLGYKPFLKRYFLSGDTSVNYMA 234


>gi|407696805|ref|YP_006821593.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax dieselolei
           B5]
 gi|407254143|gb|AFT71250.1| 3-demethylubiquinone-9 3-methyltransferase [Alcanivorax dieselolei
           B5]
          Length = 237

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 147/237 (62%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++ ++E+AKF+A+A+ WWD    ++PLH +NP RL +I        R D        G +
Sbjct: 8   NVDNSEVAKFNALAERWWDPNSEFRPLHDINPLRLNYIDE------RVD------LPGKS 55

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGG+LSE +AR GATVTGID  E  + +ARLHA+       +EY  T AE +  
Sbjct: 56  VIDIGCGGGLLSEGMARRGATVTGIDMGEAPLAVARLHAE--QSGVEVEYLQTPAEDIAA 113

Query: 224 EQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E+  ++D V   E++EHV DP+   ++ +AL    G    STINR+ +++  AI+ AE++
Sbjct: 114 ERAGQYDVVTCLEMLEHVPDPSSVIRACAALVKPGGQVFFSTINRNPKSFLFAIVGAEYV 173

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LP+GTH+++  + P EL    + A +DV++  G  YNP+T  + L+ D+SVN++
Sbjct: 174 LRLLPRGTHEYAKLIRPSELAGWSRDAGLDVRDTTGMTYNPVTQVYKLNRDVSVNYL 230


>gi|209364159|ref|YP_001425062.2| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           Dugway 5J108-111]
 gi|207082092|gb|ABS77540.2| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii Dugway
           5J108-111]
          Length = 243

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WW+  G  KPLH +NP RL +I   +              +G +++DVG
Sbjct: 21  ELAKFSDLAQDWWNPAGKMKPLHLINPVRLKYIEQQIT------------LKGKHVLDVG 68

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSE LA+ GA VTG+D  E  I +A+ HA+   +   I Y C   E L ++ ++F
Sbjct: 69  CGGGLLSEALAKHGAIVTGVDMSESLIDVAKNHAE--QQQLNINYQCQDIEILTKDAQRF 126

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPK
Sbjct: 127 DIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPK 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct: 187 GTHDYAQFIHPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 238


>gi|406040433|ref|ZP_11047788.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           ursingii DSM 16037 = CIP 107286]
          Length = 238

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 134/237 (56%), Gaps = 13/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------HAGGIAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA  D     IEY     E+L  EQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGEAPLNVARLHAQQD-NVKNIEYRQIPVEQLALEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AI+ AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAILGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++    K
Sbjct: 178 KGTHDYHKFIRPSEMAQDIREAGLTLKEMTGLHYNPLTKHYWLAPNVDVNYMVHTVK 234


>gi|29653699|ref|NP_819391.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
           493]
 gi|161829915|ref|YP_001596294.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
           331]
 gi|212213149|ref|YP_002304085.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           CbuG_Q212]
 gi|39932522|sp|Q820B5.1|UBIG_COXBU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189037619|sp|A9NBI0.1|UBIG_COXBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725539|sp|B6J1W2.1|UBIG_COXB2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|29540962|gb|AAO89905.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii RSA
           493]
 gi|161761782|gb|ABX77424.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii RSA
           331]
 gi|212011559|gb|ACJ18940.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii
           CbuG_Q212]
          Length = 234

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WW+  G  KPLH +NP RL +I   +              +G +++DVG
Sbjct: 12  ELAKFSDLAQDWWNPAGKMKPLHLINPVRLKYIEQQIT------------LKGKHVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSE LA+ GA VTG+D  E  I +A+ HA+   +   I Y C   E L ++ ++F
Sbjct: 60  CGGGLLSEALAKHGAIVTGVDMSESLIDVAKNHAE--QQQLNINYQCQDIEILTKDAQRF 117

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPK
Sbjct: 118 DIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPK 177

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct: 178 GTHDYAQFIRPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229


>gi|433514350|ref|ZP_20471132.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63049]
 gi|432245312|gb|ELL00782.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 63049]
          Length = 238

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  ++DVG
Sbjct: 12  EIAKFSRIADKWWDKSGEFKTLHDINPLRLNYI----------DGHA--DLRGKRVLDVG 59

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQR 226
           CGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L E E  
Sbjct: 60  CGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLAEAEPH 118

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE++L ++
Sbjct: 119 SFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEYLLKFV 178

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 179 PKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|393757470|ref|ZP_10346294.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alcaligenes
           faecalis subsp. faecalis NCIB 8687]
 gi|393165162|gb|EJC65211.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alcaligenes
           faecalis subsp. faecalis NCIB 8687]
          Length = 240

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/234 (41%), Positives = 143/234 (61%), Gaps = 16/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KFSA+A  WWD +  +KPLHA+NP RL +I S          Y+     G  ++DV
Sbjct: 14  AEIDKFSALASRWWDPDSEFKPLHAINPLRLDWILS----------YTGS-LAGKQVLDV 62

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGILSE LA+ GA VTGID  E+++KIARLH+    E+   ++Y   +AE + ++  
Sbjct: 63  GCGGGILSESLAQSGAEVTGIDLAERSLKIARLHS---LESGVPVKYEMISAEDMADQHP 119

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            +FD V   E++EHV DP     + + L    G    ST+NR+ +++  AI+ AE++L  
Sbjct: 120 GRFDVVTCMEMLEHVPDPGSIIAACAKLVKPGGWVFFSTLNRNPKSFLFAIVGAEYLLRL 179

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH +  F+ P EL+   +R+ +D   + G  YNP+T  + LSDD SVN++
Sbjct: 180 IPKGTHSYEGFIKPSELISSARRSGLDALALKGLEYNPITEHYRLSDDTSVNYL 233


>gi|385856039|ref|YP_005902552.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria meningitidis
           M01-240355]
 gi|325204980|gb|ADZ00434.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis M01-240355]
          Length = 242

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAEFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 EAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|389681204|ref|ZP_10172549.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           chlororaphis O6]
 gi|399010548|ref|ZP_10712917.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM17]
 gi|425900785|ref|ZP_18877376.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           chlororaphis subsp. aureofaciens 30-84]
 gi|388554740|gb|EIM17988.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           chlororaphis O6]
 gi|397883581|gb|EJL00068.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           chlororaphis subsp. aureofaciens 30-84]
 gi|398106626|gb|EJL96649.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM17]
          Length = 232

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRDAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|192361626|ref|YP_001982593.1| 3-demethylubiquinone-9 3-methyltransferase [Cellvibrio japonicus
           Ueda107]
 gi|190687791|gb|ACE85469.1| ubiquinone biosynthesis O-methyltransferase [Cellvibrio japonicus
           Ueda107]
          Length = 240

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/250 (43%), Positives = 147/250 (58%), Gaps = 18/250 (7%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           HSA  ++  AE+AKF A+A  WWD    +KPLH +NP R  FI                P
Sbjct: 5   HSA--NVDAAEIAKFEALASRWWDRNSEFKPLHDINPLRANFIDQR------------SP 50

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             G  ++DVGCGGGIL+E LA+ GATVTGID     + +ARLHA L+     + Y  TTA
Sbjct: 51  VAGRQLLDVGCGGGILAESLAQRGATVTGIDMGAAPLAVARLHA-LESGVE-LTYEQTTA 108

Query: 219 E-KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E K  +    FD V   E++EHV DPA   K+ + L  S G    STINR+ +AYA AI+
Sbjct: 109 EAKAAQMPCAFDIVTCLEMLEHVPDPASVIKACADLVKSGGDVYFSTINRNPKAYAFAIV 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISV 336
            AE++L  LPKGTH+++ F+ P EL   L+ A ++++ + G  YNPLT  + L+  D+SV
Sbjct: 169 GAEYVLKLLPKGTHEYAKFIRPSELAQWLRAAGLELQAITGMTYNPLTKHYRLNPHDVSV 228

Query: 337 NFIAFGTKNS 346
           N++    K S
Sbjct: 229 NYLVHAKKVS 238


>gi|50083338|ref|YP_044848.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter sp. ADP1]
 gi|57013199|sp|Q6FFY1.1|UBIG_ACIAD RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|49529314|emb|CAG67026.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. ADP1]
          Length = 238

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 138/237 (58%), Gaps = 13/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------HAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA+ + + + IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLNVARLHAEQE-QVANIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDIVTCMEMMEHVPDPASIIKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +  F+ P E+   ++ A + +K+M G  YNPLT  + L+ ++ VN++    K
Sbjct: 178 KGTHDYHKFIRPSEMAHDIREAGLKLKDMTGLHYNPLTKHYWLAPNVDVNYMVHTLK 234


>gi|184156377|ref|YP_001844716.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           ACICU]
 gi|226695755|sp|B2I023.1|UBIG_ACIBC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|183207971|gb|ACC55369.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Acinetobacter baumannii ACICU]
          Length = 237

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + I RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAIGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|421558003|ref|ZP_16003897.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 80179]
 gi|402333174|gb|EJU68485.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria
           meningitidis 80179]
          Length = 238

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 EAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P +L  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 231


>gi|189037618|sp|A9KGL7.1|UBIG_COXBN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
          Length = 234

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WW+  G  KPLH +NP RL +I   +              +G +++DVG
Sbjct: 12  ELAKFSDLAQDWWNPAGKMKPLHLINPVRLKYIEQQIT------------LKGKHVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGG+LSE LA+ GA VTG+D  E  I +A+ HA+   +   I Y C   E L ++ ++F
Sbjct: 60  CGGGLLSEALAKHGAIVTGVDMSESLIDVAKNHAE--QQQLNINYQCQDIEILTKDAQRF 117

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D +   E++EHV DP    K+ +AL    G    STINR+ +AY   I+ AE++ + LPK
Sbjct: 118 DIITCMELLEHVPDPQRMIKNCAALIKPGGKLFFSTINRNFKAYLYTIVGAEYVFNLLPK 177

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH ++ F+ P EL    +   + + ++ G  Y+PL   + LS D+SVN++A
Sbjct: 178 GTHDYAQFIHPSELTQWAESGGLRLLDITGIHYHPLKNEFDLSRDVSVNYLA 229


>gi|407689398|ref|YP_006804571.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|407292778|gb|AFT97090.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 250

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 146/245 (59%), Gaps = 4/245 (1%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +  K +  S+    E+A+F A+AD+WWD EG YK     N  RL  I++ +  HF +   
Sbjct: 3   DKSKKTGDSNFSEQEIARFDALADSWWDPEGKYKTALDFNRARLNVIKAQIENHFGQGNL 62

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
               +  L+++D+G GGG++SEPLA++GA VTGIDA   ++++A+ HA        ++Y 
Sbjct: 63  PP-DYSALSVIDIGSGGGLISEPLAKLGAQVTGIDASAVSVEVAKRHAQ--NTGVKVDYQ 119

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              + ++VEE R++D VI +EV+EHV D  +  +  ++L    G  +++T+NR++++Y  
Sbjct: 120 HKLSSEVVEEGRQYDVVINAEVVEHVPDQQQLMRECASLVKPGGLLILATLNRTLKSYVV 179

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE+++ +LP GTH W  F+ P EL   +      +K   G   NPL G+W  +  +
Sbjct: 180 AIVGAEYVMRYLPIGTHDWKKFVKPSELKRWIGN-EFTLKYQVGMRLNPLKGKWLTTSSL 238

Query: 335 SVNFI 339
           +VN+I
Sbjct: 239 AVNYI 243


>gi|383310524|ref|YP_005363334.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. multocida str. HN06]
 gi|380871796|gb|AFF24163.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           subsp. multocida str. HN06]
          Length = 242

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 137/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I        RK           
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQQANGLTRK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLHIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L    G    STINRS++A+A 
Sbjct: 111 QTALFAERGEDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRSLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|395798590|ref|ZP_10477874.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Ag1]
 gi|421143532|ref|ZP_15603471.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           BBc6R8]
 gi|395337325|gb|EJF69182.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           Ag1]
 gi|404505223|gb|EKA19254.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           BBc6R8]
          Length = 232

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 143/238 (60%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE+L 
Sbjct: 50  KVLDVGCGGGILSESMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEELA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|409426091|ref|ZP_11260657.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           HYS]
          Length = 232

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERV------------KLAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACLRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L++D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRDAGLTVKDIIGLTYNPLTKHYKLANDVDVNYM 225


>gi|338999582|ref|ZP_08638224.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           TD01]
 gi|338763480|gb|EGP18470.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Halomonas sp.
           TD01]
          Length = 247

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/255 (39%), Positives = 149/255 (58%), Gaps = 23/255 (9%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDP 153
           N+ H    ++  AE+AKF A+A  WWD++G +KPLH +NP RL FI  R+ L        
Sbjct: 11  NRNHD---NVDAAEVAKFEALASRWWDSKGEFKPLHDINPLRLDFIDARAGLA------- 60

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
                  G  ++DVGCGGGILSE +A  GA VTGID  +  + +ARLHA       +++Y
Sbjct: 61  -------GKKVLDVGCGGGILSESMANRGADVTGIDLGDAPLNVARLHAT--ESGVSVDY 111

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              + E L  EQ   +D V   E++EHV DPA   ++ S L    G    ST+NR+ ++Y
Sbjct: 112 RLISVEALAAEQPGHYDVVTCMEMLEHVPDPASVIRACSELVRPGGYVFFSTLNRTPKSY 171

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-S 331
           A AI+ AE++L  LP+GTH ++ F+ P E+    + + ++V E  G  YNPLT  + L +
Sbjct: 172 AFAILGAEYVLKLLPRGTHDYAKFIRPSEMAAWARVSDLEVNEQTGLTYNPLTRHYRLVA 231

Query: 332 DDISVNFIAFGTKNS 346
           +D+SVN++ +  K S
Sbjct: 232 NDVSVNYMMYCRKAS 246


>gi|381199080|ref|ZP_09906232.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sphingobium
           yanoikuyae XLDN2-5]
          Length = 244

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 143/231 (61%), Gaps = 6/231 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E A F  +A  WWD +G    LH LNP RLA+IR+ + RH+  D +   P  G   +DVG
Sbjct: 13  EAAHFGTMAADWWDPKGSSAMLHKLNPVRLAYIRAAIDRHWDSDDHGFHPLSGKRALDVG 72

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+EPLAR+GA+VTG+DA  +NI +A  HA    +   I+Y  T  E++ +    +
Sbjct: 73  CGAGLLAEPLARLGASVTGLDAAPENIAVAVAHA--QGQGLAIDYRATPVEQVSDS--GY 128

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V + EVIEHVADPA F ++L+A    +G  ++ST NR+  +    I   E I   +PK
Sbjct: 129 DLVTSMEVIEHVADPAAFVRALAAKLAPDGLMILSTPNRTPMSRLAMITIGESI-GGIPK 187

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH W+ F+TP+EL  +L+ A ++V + +G  ++P  G ++LS + ++N++
Sbjct: 188 GTHDWAKFITPDELTALLEDAGLEVTDSSGLAFDPARG-FTLSANTAINYL 237


>gi|169797755|ref|YP_001715548.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AYE]
 gi|213155445|ref|YP_002317490.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB0057]
 gi|215485106|ref|YP_002327347.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii AB307-0294]
 gi|260557755|ref|ZP_05829969.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii ATCC 19606 = CIP 70.34]
 gi|301347653|ref|ZP_07228394.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB056]
 gi|301511156|ref|ZP_07236393.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB058]
 gi|301595699|ref|ZP_07240707.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB059]
 gi|417546135|ref|ZP_12197221.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC032]
 gi|417561456|ref|ZP_12212335.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC137]
 gi|417575179|ref|ZP_12226032.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Canada BC-5]
 gi|417870022|ref|ZP_12514995.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH1]
 gi|417882395|ref|ZP_12526693.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH4]
 gi|421199749|ref|ZP_15656910.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC109]
 gi|421642676|ref|ZP_16083190.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-235]
 gi|421645797|ref|ZP_16086253.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-251]
 gi|421650571|ref|ZP_16090945.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC0162]
 gi|421660780|ref|ZP_16100965.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-83]
 gi|421671939|ref|ZP_16111906.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC099]
 gi|421697707|ref|ZP_16137253.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-58]
 gi|421793841|ref|ZP_16229957.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-2]
 gi|421799117|ref|ZP_16235122.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Canada BC1]
 gi|424061620|ref|ZP_17799109.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab33333]
 gi|424065049|ref|ZP_17802533.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab44444]
 gi|445476473|ref|ZP_21453847.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-78]
 gi|226695753|sp|B7H2Y9.1|UBIG_ACIB3 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226695754|sp|B7IBN2.1|UBIG_ACIB5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226723584|sp|B0V5X4.1|UBIG_ACIBY RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|169150682|emb|CAM88592.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii AYE]
 gi|213054605|gb|ACJ39507.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii AB0057]
 gi|213989132|gb|ACJ59431.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii AB307-0294]
 gi|260408928|gb|EEX02232.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii ATCC 19606 = CIP 70.34]
 gi|342228770|gb|EGT93648.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH1]
 gi|342237895|gb|EGU02346.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH4]
 gi|395524038|gb|EJG12127.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC137]
 gi|395564746|gb|EJG26397.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC109]
 gi|400205912|gb|EJO36892.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Canada BC-5]
 gi|400384023|gb|EJP42701.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC032]
 gi|404573304|gb|EKA78342.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-58]
 gi|404666497|gb|EKB34444.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab33333]
 gi|404672499|gb|EKB40314.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab44444]
 gi|408509818|gb|EKK11485.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC0162]
 gi|408512458|gb|EKK14100.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-235]
 gi|408518127|gb|EKK19661.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-251]
 gi|408703703|gb|EKL49089.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-83]
 gi|410380873|gb|EKP33449.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC099]
 gi|410396082|gb|EKP48366.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-2]
 gi|410410827|gb|EKP62718.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Canada BC1]
 gi|444777686|gb|ELX01710.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-78]
 gi|452950009|gb|EME55474.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii MSP4-16]
          Length = 237

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVKTG 236


>gi|431805623|ref|YP_007232524.1| 3-demethylubiquinone-9 3-methyltransferase [Liberibacter crescens
           BT-1]
 gi|430799598|gb|AGA64269.1| 3-demethylubiquinone-9 3-methyltransferase [Liberibacter crescens
           BT-1]
          Length = 251

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 147/237 (62%), Gaps = 2/237 (0%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+  FS IA+ WW+ +G +KPLH +NP R+ +IR+ +  HF+ +     P +GL ++D+
Sbjct: 13  AEIEHFSNIANEWWNPQGKFKPLHKINPIRIEYIRNKIIHHFKYNVQEIYPLKGLRVLDL 72

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+LSEP+A MGA V GID   KNI++A  H+ +  +   ++Y    AE L   +  
Sbjct: 73  GCGGGLLSEPIAEMGADVIGIDPSPKNIEVAIAHSRM--KGIVVDYRTGYAEDLAASKET 130

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD ++  E++EHV + + F +   ++    G   ISTINR+++A   AI+AAE++L WLP
Sbjct: 131 FDVILNMEIVEHVVNISSFIQICCSMLRKNGLMFISTINRNLKAMLLAIVAAEYLLQWLP 190

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +   +TPEEL  +L   ++++ +  G  +N L  +W LS +  VN++    K
Sbjct: 191 KGTHHYKKLVTPEELNHLLLENNMNILDCTGVTFNILCNKWKLSQNTDVNYMMLAQK 247


>gi|330844059|ref|XP_003293955.1| hypothetical protein DICPUDRAFT_10678 [Dictyostelium purpureum]
 gi|325075650|gb|EGC29511.1| hypothetical protein DICPUDRAFT_10678 [Dictyostelium purpureum]
          Length = 265

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 149/253 (58%), Gaps = 12/253 (4%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTL--CRHFRKDPYSARPFEG 161
           +L++ E++ F+ ++  WW+ EG  KPLH +NP R+ +I   L       K+     P +G
Sbjct: 12  TLRNEEISFFNTLSKDWWNPEGTMKPLHRMNPFRVKYIIDRLKNSNEIVKNNSIQEPLKG 71

Query: 162 LNIVDVGCGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPE------TSTIEYC 214
           LN++DVGCG G+L E L+R+GA TV G+DA   ++K+A  HA LD +       + ++Y 
Sbjct: 72  LNVIDVGCGAGLLCESLSRLGADTVIGLDAAGNSVKMAISHASLDSKLDENLNNNKLKYI 131

Query: 215 CTTAEKLV---EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
            +T E  +   E +  FD V + EVIEHV +P +F + L+ +    G+  ISTIN++  +
Sbjct: 132 ESTIENFLNLEESKNGFDLVCSLEVIEHVDNPKQFVELLTKVLKPGGSIFISTINKTNLS 191

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y T I+ AE++L  +P GTH W  ++TP EL   L   + ++ ++ G  YNP++  WS S
Sbjct: 192 YLTTILGAEYLLKLVPVGTHHWEQYVTPNELTQQLSFNNCEIVDVQGLFYNPISFEWSFS 251

Query: 332 DDISVNFIAFGTK 344
            + SVN+I    K
Sbjct: 252 ANKSVNYIVHAIK 264


>gi|417555667|ref|ZP_12206736.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-81]
 gi|421453696|ref|ZP_15903048.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-123]
 gi|421633153|ref|ZP_16073795.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-13]
 gi|421674915|ref|ZP_16114842.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC065]
 gi|421690030|ref|ZP_16129702.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-116]
 gi|421804821|ref|ZP_16240719.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-A-694]
 gi|400213564|gb|EJO44518.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-123]
 gi|400392084|gb|EJP59131.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-81]
 gi|404564993|gb|EKA70167.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-116]
 gi|408707383|gb|EKL52669.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-13]
 gi|410383539|gb|EKP36070.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC065]
 gi|410410387|gb|EKP62294.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-A-694]
          Length = 237

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVKTG 236


>gi|225024851|ref|ZP_03714043.1| hypothetical protein EIKCOROL_01739 [Eikenella corrodens ATCC
           23834]
 gi|224942380|gb|EEG23589.1| hypothetical protein EIKCOROL_01739 [Eikenella corrodens ATCC
           23834]
          Length = 240

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 142/242 (58%), Gaps = 13/242 (5%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           +++  ++  AE+ KFS +A  WW+ EG +K LH +NP RL FIR             +  
Sbjct: 2   NTSAQNVDAAEIDKFSRLAAQWWNPEGEFKSLHEINPLRLGFIRE-----------HSGG 50

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             G N++DVGCGGGILSE +AR  A  TGID  EK++++A+ HA+     + + Y C + 
Sbjct: 51  LTGKNVLDVGCGGGILSEAIAREAAQATGIDMAEKSLQVAQAHAE-QQGLANLHYRCISV 109

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E L  EQ   +D V   E++EHV DPA    + + L    G+   ST++R+ ++YA AII
Sbjct: 110 EALAAEQPAAYDVVTCMEMLEHVPDPASVIAACAKLVKPGGSLFFSTLSRTAKSYAQAII 169

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
           AAE++L  + KGTH W  F+ P +L  + ++A +++   +G  YNPLT R+ L     VN
Sbjct: 170 AAEYLLGLVAKGTHDWQRFINPADLARLCRQAGLNITTTSGLTYNPLTRRYRLCQRTDVN 229

Query: 338 FI 339
           ++
Sbjct: 230 YM 231


>gi|170729229|ref|YP_001763255.1| ubiquinone biosynthesis O-methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|169814576|gb|ACA89160.1| ubiquinone biosynthesis O-methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 270

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 16/252 (6%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
           H E+AKF A+A+ W D +G +K + A N TRL  I+  +  HF++D     PF  L ++D
Sbjct: 19  HEEIAKFDALAEEWRDPQGKFKHVLAFNLTRLTAIQMMIAEHFKRDLTQDIPFNDLTMLD 78

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           +GCG G+L EPL++ GA VTGIDA   NI +AR HA+ +      ++C   AE L+ +Q 
Sbjct: 79  IGCGVGLLCEPLSKQGAHVTGIDASCYNIDLARQHAEKNNININYQHC--LAEDLLAKQP 136

Query: 226 -------------RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
                        + +D V+ +EVIEHV D     K+   L    G  +++T+NR++++Y
Sbjct: 137 INIANNQSDRIGSKHYDVVLNTEVIEHVEDQQALIKTCCELVKPGGILIMATLNRTIKSY 196

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
              II AE+++ +LP GTH W  F+TP+E+  ++    +      G  +NP T +WS++ 
Sbjct: 197 VIGIIGAEYVMRYLPIGTHDWHYFVTPKEINTMISANGLTPITSQGMSFNPFTKQWSITS 256

Query: 333 DISVNFIAFGTK 344
           +  VN++++  K
Sbjct: 257 NTDVNYLSYAYK 268


>gi|392532811|ref|ZP_10279948.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           arctica A 37-1-2]
          Length = 236

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF AIA+ WWD +G +KPLH +NP RL FI +     F K+          
Sbjct: 5   QNVDHAEIAKFEAIAERWWDLDGEFKPLHEINPLRLDFIANKTQGLFDKEA--------- 55

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
             +DVGCGGGILS+ +ARMG  VTGID  ++ + +A+LH+    ET   ++Y    AE+ 
Sbjct: 56  --LDVGCGGGILSQSMARMGGKVTGIDMGQEPLTVAKLHS---LETGVNVDYIKVPAEEF 110

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +   +FD +   E++EHV DPA    +++AL         ST+N++ +AY  AI+ AE
Sbjct: 111 ATQYPERFDVITCMEMLEHVPDPASIIHAVAALAKPGADVFFSTLNKTPKAYLYAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            +L  +P+GTH    F+ P +L+   ++A + V+   G  YNPL+ +++L+ D+SVN+I 
Sbjct: 171 KLLKMVPEGTHDHKKFIKPAQLIAWAEQAGLKVRASTGLSYNPLSKQYTLNSDVSVNYIL 230

Query: 341 FGTK 344
           +  K
Sbjct: 231 YFEK 234


>gi|395651182|ref|ZP_10439032.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 232

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERIS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVLGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD +   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVITCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    ++A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRQAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|169632065|ref|YP_001705801.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           SDF]
 gi|421622580|ref|ZP_16063481.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC074]
 gi|421663382|ref|ZP_16103530.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC110]
 gi|421694163|ref|ZP_16133791.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-692]
 gi|421798338|ref|ZP_16234362.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-21]
 gi|421809011|ref|ZP_16244852.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC035]
 gi|226695756|sp|B0VMN8.1|UBIG_ACIBS RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|169150857|emb|CAO99460.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii]
 gi|404568687|gb|EKA73783.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-692]
 gi|408694932|gb|EKL40492.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC074]
 gi|408713487|gb|EKL58654.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC110]
 gi|410394431|gb|EKP46760.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-21]
 gi|410415241|gb|EKP67032.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC035]
          Length = 237

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|399017569|ref|ZP_10719760.1| ubiquinone biosynthesis O-methyltransferase [Herbaspirillum sp.
           CF444]
 gi|398103167|gb|EJL93340.1| ubiquinone biosynthesis O-methyltransferase [Herbaspirillum sp.
           CF444]
          Length = 250

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 138/239 (57%), Gaps = 15/239 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P +    EL KFS +A  WWD    ++PLH +NP RL +I +                 G
Sbjct: 19  PMNADPLELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAA------------LSG 66

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
            N+VD+GCGGGIL+E +AR GA VTGID  EK +K+A LH         + Y    AE+L
Sbjct: 67  KNVVDIGCGGGILAESMARKGAKVTGIDLSEKALKVADLHGM--ESGVQVRYEKIAAEEL 124

Query: 222 -VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            V E  +FD V   E++EHV DPA   ++ S L    G    ST+NR+ +AY  AI+ AE
Sbjct: 125 AVREAGQFDVVTCMEMLEHVPDPASIVRACSTLAKPGGHVFFSTLNRNPKAYLFAILGAE 184

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           ++L  LPKGTH ++ F+TP EL   ++ A +++  + G  YNPLT  +S++ D SVN++
Sbjct: 185 YLLRMLPKGTHDYAKFITPAELARFIREADLELDGIKGLSYNPLTKLYSINQDTSVNYM 243


>gi|240015651|ref|ZP_04722191.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           FA6140]
          Length = 238

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 141/240 (58%), Gaps = 19/240 (7%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFEG 161
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I   + LC              G
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYIDGHADLC--------------G 52

Query: 162 LNIVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
             ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E 
Sbjct: 53  KRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVED 111

Query: 221 LV-EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L   E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AA
Sbjct: 112 LAGAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAA 171

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E++L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 172 EYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 231


>gi|378774552|ref|YP_005176795.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           36950]
 gi|356597100|gb|AET15826.1| 3-demethylubiquinone-9 3-methyltransferase [Pasteurella multocida
           36950]
          Length = 242

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 136/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I              A    G 
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQ-----------QANGLTGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLHIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L    G    STINR+++A+A 
Sbjct: 111 QTALFAERGEDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPL G++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLAGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|332873547|ref|ZP_08441496.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6014059]
 gi|384130027|ref|YP_005512639.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           1656-2]
 gi|387125739|ref|YP_006291621.1| ubiquinone biosynthesis O-methyltransferase [Acinetobacter
           baumannii MDR-TJ]
 gi|407930951|ref|YP_006846594.1| hypothetical protein M3Q_267 [Acinetobacter baumannii TYTH-1]
 gi|417548256|ref|ZP_12199337.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-18]
 gi|417566382|ref|ZP_12217254.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC143]
 gi|417576393|ref|ZP_12227238.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-17]
 gi|417877172|ref|ZP_12521900.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH3]
 gi|421631228|ref|ZP_16071914.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC180]
 gi|421655695|ref|ZP_16096011.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-72]
 gi|421701660|ref|ZP_16141150.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ZWS1122]
 gi|421705472|ref|ZP_16144899.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ZWS1219]
 gi|421787092|ref|ZP_16223469.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-82]
 gi|425749580|ref|ZP_18867552.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-348]
 gi|445407984|ref|ZP_21432490.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-57]
 gi|445450104|ref|ZP_21444439.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-A-92]
 gi|445462274|ref|ZP_21449060.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC047]
 gi|322506247|gb|ADX01701.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           1656-2]
 gi|332738244|gb|EGJ69122.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6014059]
 gi|342236282|gb|EGU00818.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ABNIH3]
 gi|385880231|gb|AFI97326.1| ubiquinone biosynthesis O-methyltransferase [Acinetobacter
           baumannii MDR-TJ]
 gi|395552054|gb|EJG18062.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC143]
 gi|395569614|gb|EJG30276.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-17]
 gi|400388555|gb|EJP51627.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-18]
 gi|407195665|gb|EKE66793.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ZWS1219]
 gi|407195969|gb|EKE67088.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii ZWS1122]
 gi|407899532|gb|AFU36363.1| hypothetical protein M3Q_267 [Acinetobacter baumannii TYTH-1]
 gi|408507216|gb|EKK08913.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-72]
 gi|408694688|gb|EKL40251.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC180]
 gi|410409837|gb|EKP61760.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-82]
 gi|425488338|gb|EKU54675.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-348]
 gi|444756087|gb|ELW80646.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-A-92]
 gi|444770529|gb|ELW94682.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC047]
 gi|444780884|gb|ELX04810.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-57]
          Length = 237

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|424924254|ref|ZP_18347615.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas
           fluorescens R124]
 gi|404305414|gb|EJZ59376.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas
           fluorescens R124]
          Length = 232

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRVAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|374702040|ref|ZP_09708910.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           S9]
          Length = 232

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDPAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSESMAQRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DPA   ++   +    G    STINR+ +AY  A+I AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPASIIRACHRMVKPGGQVFFSTINRNPKAYMFAVIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 LLRLLPRGTHDFKKFIRPSELGSWSRAAGLEVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|379022710|ref|YP_005299371.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           canadensis str. CA410]
 gi|376323648|gb|AFB20889.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           canadensis str. CA410]
          Length = 236

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 134/239 (56%), Gaps = 10/239 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+            L
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGDFGILHCINPIRLKYIIEKITSHYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A        I Y  +T E+L 
Sbjct: 55  EILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + +D VI  EVIEHV +  +F  +L       G  +ISTINR  +AY   II AE+I
Sbjct: 112 KSNKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGIAIISTINRVKKAYILGIIVAEYI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           L W+PK TH +S FL P E+  +L    I++KE+ G VY+     W LSD+I VN+  +
Sbjct: 172 LGWVPKNTHNYSKFLKPSEIYEMLTDTGIEIKELKGLVYDIAKNEWKLSDNIEVNYFMY 230


>gi|77460302|ref|YP_349809.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           Pf0-1]
 gi|398973357|ref|ZP_10684316.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM25]
 gi|109895907|sp|Q3K8T6.1|UBIG_PSEPF RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|77384305|gb|ABA75818.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas fluorescens
           Pf0-1]
 gi|398143073|gb|EJM31955.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM25]
          Length = 232

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|119944870|ref|YP_942550.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Psychromonas
           ingrahamii 37]
 gi|119863474|gb|ABM02951.1| 3-demethylubiquinone-9 3-methyltransferase [Psychromonas ingrahamii
           37]
          Length = 241

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 142/237 (59%), Gaps = 14/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFSA+A+ WWD EG +KPLH LNPTRL +I       F K           +I D+G
Sbjct: 16  EIEKFSAMAEQWWDLEGDFKPLHMLNPTRLRYIEQGAEGLFAK-----------SIADIG 64

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGILSE +A+ GA V GID     ++IA+LHA L+ +T  ++Y   TAE    +   +
Sbjct: 65  CGGGILSESMAKKGANVIGIDMAHAALQIAKLHA-LETQTK-VQYQKITAEDFASQHAGQ 122

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++   L    G    STIN++ +AY   I+ AE++L W+P
Sbjct: 123 FDLVTCMEMLEHVPDPASIVQACCDLLKPGGTVYFSTINKTFKAYLMMIVGAENLLKWVP 182

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH++  F+ P +L+  +   +++ +++ G  +NPL   + ++ +++VN++   TK
Sbjct: 183 KGTHEYEKFIRPSQLLTAIDSTTLNCEDLCGVEFNPLQSEFVITKNVNVNYMLRCTK 239


>gi|88705958|ref|ZP_01103666.1| 3-demethylubiquinone-9 3-methyltransferase [Congregibacter
           litoralis KT71]
 gi|88699672|gb|EAQ96783.1| 3-demethylubiquinone-9 3-methyltransferase [Congregibacter
           litoralis KT71]
          Length = 238

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/239 (42%), Positives = 142/239 (59%), Gaps = 16/239 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKF A+A  WWD +G ++PLH +NP R  +I          D +S  P  G  ++DV
Sbjct: 12  AEIAKFEALAARWWDMDGEFRPLHEINPLRANWI----------DGHS--PVAGQRLLDV 59

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +AR GA VTGID  E  + +ARLH  L+     + Y  +TAE    E   
Sbjct: 60  GCGGGILAESMARRGADVTGIDMGEGPLSVARLH-QLESGVD-VHYERSTAEAFAAEHPE 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP    ++ + LT   G    STINR+ +A+  AI+ AEHIL  L
Sbjct: 118 HFDVVCCLEMLEHVPDPGAVIQACADLTRPGGNLYFSTINRNPKAFLFAIVGAEHILRML 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIAFGTK 344
           P GTH++  F+ P EL   L+ A + ++ M G  YNPL+ R+ L+ +D+SVNF+   +K
Sbjct: 178 PAGTHEYEKFIRPSELAQGLRDAGLQLESMTGLTYNPLSKRYRLNPNDVSVNFMVHASK 236


>gi|384141305|ref|YP_005524015.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385235615|ref|YP_005796954.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|416146510|ref|ZP_11601214.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB210]
 gi|417570187|ref|ZP_12221044.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC189]
 gi|421202007|ref|ZP_15659161.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AC12]
 gi|421534281|ref|ZP_15980557.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AC30]
 gi|421666656|ref|ZP_16106746.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC087]
 gi|421689087|ref|ZP_16128773.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-143]
 gi|424054199|ref|ZP_17791729.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab11111]
 gi|425753628|ref|ZP_18871511.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-113]
 gi|323516123|gb|ADX90504.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|333366224|gb|EGK48238.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB210]
 gi|347591798|gb|AEP04519.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           baumannii MDR-ZJ06]
 gi|395550635|gb|EJG16644.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC189]
 gi|398328615|gb|EJN44739.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AC12]
 gi|404558979|gb|EKA64252.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii IS-143]
 gi|404666754|gb|EKB34685.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           Ab11111]
 gi|409987905|gb|EKO44082.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AC30]
 gi|410387690|gb|EKP40135.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC087]
 gi|425497951|gb|EKU64041.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii Naval-113]
          Length = 237

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|313667695|ref|YP_004047979.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria lactamica
           020-06]
 gi|313005157|emb|CBN86589.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria lactamica
           020-06]
          Length = 242

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FDAV   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 GAEPHSFDAVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P +L  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 235


>gi|293611268|ref|ZP_06693566.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|375136571|ref|YP_004997221.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           calcoaceticus PHEA-2]
 gi|424741218|ref|ZP_18169579.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-141]
 gi|292826519|gb|EFF84886.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325124016|gb|ADY83539.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           calcoaceticus PHEA-2]
 gi|422945151|gb|EKU40122.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-141]
          Length = 237

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 134/232 (57%), Gaps = 13/232 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPLTKHYWLAPNVDVNYM 229


>gi|148244708|ref|YP_001219402.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326535|dbj|BAF61678.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 232

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 136/239 (56%), Gaps = 13/239 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KF+ +A  WWD    +KPLH +NP RL +I+               P +  
Sbjct: 2   NNIDFNEVNKFATLASHWWDKNSKFKPLHDINPLRLNYIKQQ----------HNCPLKDK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+D+GCGGGIL+E  A  GA VTGID  E+ +++A+LH  L      ++Y     EK  
Sbjct: 52  QILDIGCGGGILTESFALEGAVVTGIDMAEEGLEVAKLH--LLESGLKVDYQKIYVEKFA 109

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +  +KFD +   E++EHV DP    K+   L    G    STINR+ ++Y  AII AE+
Sbjct: 110 RQNTKKFDIITCLEMLEHVPDPGSIIKACGELVKPGGQVFFSTINRNAKSYLFAIIGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           IL  LP+GTH W+ F+ P E+    + +S+ +K M G VYNP T  + L DD+SVN+++
Sbjct: 170 ILKLLPQGTHDWNKFIQPSEIDKWARASSLSLKGMTGIVYNPFTKTYKLKDDVSVNYLS 228


>gi|339324949|ref|YP_004684642.1| 3-demethylubiquinone-9 3-methyltransferase [Cupriavidus necator
           N-1]
 gi|338165106|gb|AEI76161.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Cupriavidus
           necator N-1]
          Length = 252

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 131/231 (56%), Gaps = 13/231 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD E  +KPLH LNP RL +I                   G  +VDVG
Sbjct: 27  EIDKFSELAHRWWDPESEFKPLHELNPLRLGWIDGIAG------------LAGKRVVDVG 74

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+GATV GID   K +K+A LH+ L+   +              E    
Sbjct: 75  CGGGILSESMARLGATVRGIDLSTKALKVADLHS-LESGVAVTYEEIAAEALAEREPASV 133

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   E++EHV DPA   ++ + L    G    STINR+++AY  AI+ AE++L+ LP+
Sbjct: 134 DVVTCMEMLEHVPDPASIVQACARLVKPGGYVFFSTINRNLKAYLLAIVGAEYVLNMLPR 193

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH +  F+TP EL    +RAS+D+ EM G  YNPL+  ++L  D  VN++
Sbjct: 194 GTHDYDKFITPSELARFARRASLDLVEMRGMTYNPLSQVYALGRDTDVNYM 244


>gi|262281429|ref|ZP_06059210.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257255|gb|EEY75992.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           calcoaceticus RUH2202]
          Length = 237

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 134/233 (57%), Gaps = 13/233 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  D     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQD-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVRACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++ 
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPLTKHYWLAPNVDVNYMV 230


>gi|399520030|ref|ZP_10760816.1| 3-demethylubiquinone-9 3-methyltransferas [Pseudomonas
           pseudoalcaligenes CECT 5344]
 gi|399112030|emb|CCH37375.1| 3-demethylubiquinone-9 3-methyltransferas [Pseudomonas
           pseudoalcaligenes CECT 5344]
          Length = 234

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 4   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +ARLH  L+     ++Y   TAE L 
Sbjct: 52  RVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLSVARLH-QLESGVE-VDYRQITAEALA 109

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   L    G    STINR+ +AY  A+I AE+
Sbjct: 110 EEMPEQFDVVTCLEMLEHVPDPSSVIRACHKLVKPGGQVFFSTINRNPKAYLFAVIGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L  D+ VN++
Sbjct: 170 ILRLLPRGTHDFKKFIRPSELGAWSRAAGLEVKDIIGLTYNPLTKHYKLEADVDVNYM 227


>gi|28868948|ref|NP_791567.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28852188|gb|AAO55262.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 239

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 9   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERANLA-------------- 54

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE 
Sbjct: 55  GKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAED 112

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ A
Sbjct: 113 LAEEMPEQFDVVTCLEMLEHVPDPSSVIRACHRMVKPGGQVFFSTINRNPKAYLFAVVGA 172

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 173 EYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 232


>gi|339486333|ref|YP_004700861.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida S16]
 gi|421531226|ref|ZP_15977652.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida S11]
 gi|431801320|ref|YP_007228223.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida HB3267]
 gi|338837176|gb|AEJ11981.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida S16]
 gi|402211354|gb|EJT82825.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida S11]
 gi|430792085|gb|AGA72280.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida HB3267]
          Length = 232

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 139/239 (58%), Gaps = 15/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDERVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++ 
Sbjct: 168 ILKMLPRGTHDFKKFIRPSELGAWSRVAGLQVKDIIGLTYNPLTKHYKLSSDVDVNYMV 226


>gi|254492802|ref|ZP_05105973.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           1291]
 gi|268595932|ref|ZP_06130099.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268600390|ref|ZP_06134557.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|268602623|ref|ZP_06136790.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268681173|ref|ZP_06148035.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268685649|ref|ZP_06152511.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291044807|ref|ZP_06570516.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|293397895|ref|ZP_06642101.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria gonorrhoeae
           F62]
 gi|385336925|ref|YP_005890872.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           TCDC-NG08107]
 gi|226511842|gb|EEH61187.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           1291]
 gi|268549720|gb|EEZ44739.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268584521|gb|EEZ49197.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|268586754|gb|EEZ51430.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268621457|gb|EEZ53857.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268625933|gb|EEZ58333.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291011701|gb|EFE03697.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|291611841|gb|EFF40910.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria gonorrhoeae
           F62]
 gi|317165468|gb|ADV09009.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 242

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECVRVEDLA 117

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 GAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVRPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F++P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFISPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|424863532|ref|ZP_18287444.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86A]
 gi|400756853|gb|EJP71065.1| 3-demethylubiquinone-9 3-O-methyltransferase [SAR86 cluster
           bacterium SAR86A]
          Length = 232

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 141/242 (58%), Gaps = 15/242 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++ H E+ KF+ +AD WW+  G +KPLH +NP R  +I+  L              E  +
Sbjct: 4   NIDHQEVNKFAELADEWWNKNGDFKPLHVINPLRANYIKEKL------------DLESKS 51

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           I+DVGCGGG+L+E L   GA VTGIDA    I++A++HA        I Y   TAE+L+ 
Sbjct: 52  ILDVGCGGGLLTEALYDSGANVTGIDAAGPGIEVAKIHAS--KGNKKINYFEQTAEELLN 109

Query: 224 EQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + FD V   EV+EHV DP    K+   L    G   +STINR+ R++ TAI+ AE+I
Sbjct: 110 KNSELFDVVTCLEVLEHVPDPKSLVKTCIQLLKPNGHLFLSTINRNPRSWITAIVGAEYI 169

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
            + LPKGTH++  F+ P EL   ++  + ++ E  G  YNP+T + +L++D+ VN++   
Sbjct: 170 FNLLPKGTHEFDKFIKPSELASYVRSGNANLLETKGMFYNPITHKANLNNDLGVNYLMHA 229

Query: 343 TK 344
            K
Sbjct: 230 KK 231


>gi|409407458|ref|ZP_11255909.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum sp.
           GW103]
 gi|386433209|gb|EIJ46035.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum sp.
           GW103]
          Length = 238

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 136/237 (57%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD    ++PLH +NP RL +I +              P  G  ++D+G
Sbjct: 14  EIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINAR------------APLAGKKVIDIG 61

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV-EEQRK 227
           CGGGIL+E +AR GA VTGID  +K +K+A LH+        + Y    AE +   E  +
Sbjct: 62  CGGGILAESMARKGADVTGIDLSDKALKVADLHSM--ESGVQVRYEKIAAEDMAAREAGQ 119

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++ + L    G    ST+NR+M++Y  AII AE++L  LP
Sbjct: 120 YDVVTCMEMLEHVPDPAAIVRAAATLAKPGGKLFFSTLNRNMKSYVMAIIGAEYVLRLLP 179

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH ++ F+TP EL    + A + +    G  YNPLT  +SL+DD SVN++   TK
Sbjct: 180 KGTHDYAKFITPAELAHYTREAGLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 236


>gi|297538148|ref|YP_003673917.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera
           versatilis 301]
 gi|297257495|gb|ADI29340.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera
           versatilis 301]
          Length = 246

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 141/246 (57%), Gaps = 15/246 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P +  H EL KF  +A  WWD    +KPLH LNP RLA+I                  +G
Sbjct: 14  PINADHLELQKFGELAHKWWDKNSEFKPLHELNPLRLAWIDELAS------------LKG 61

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
             ++DVGCGGGILSE +   GA V GID  EK + +A+LH  L+   + ++Y     E+L
Sbjct: 62  KRVLDVGCGGGILSESMYFKGAEVVGIDLGEKALSVAKLH-QLE-SGAKVDYQYIAVEQL 119

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +Q   FD V   E++EHV DPA    + + L    G+   STINR+ +AY  A+I AE
Sbjct: 120 AAQQPASFDVVTCMEMLEHVPDPASIVAACARLVKPGGSVFFSTINRNPKAYLFAVIGAE 179

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L+ LPKGTH ++ F+ P EL    ++A ++V  M G  YNP+T  +SL DD+SVN++ 
Sbjct: 180 YLLNLLPKGTHDYAKFIKPSELSSWARQADLNVTVMRGMSYNPITQHYSLGDDVSVNYML 239

Query: 341 FGTKNS 346
              K++
Sbjct: 240 HTIKSA 245


>gi|410693782|ref|YP_003624403.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) [Thiomonas sp. 3As]
 gi|294340206|emb|CAZ88578.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) [Thiomonas sp. 3As]
          Length = 236

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 142/232 (61%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD  G ++PLH LNP RL +I+  +               G  +VD+G
Sbjct: 12  EIDKFSVLAHRWWDEHGEFRPLHLLNPHRLRWIQDHVG------------LGGKAVVDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGILSE +A  GA VTGID  + ++++ARLHA LD +   I Y   +AE+L  E   +
Sbjct: 60  CGGGILSESMAAAGAKVTGIDLADASLQVARLHA-LDAQLD-INYRLVSAERLATEAAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ +AL    G   +ST+NR+ +AY  AI+ AE++L  LP
Sbjct: 118 FDVVTCMEMLEHVPDPASIIQASAALVRPGGWVFVSTLNRNAKAYLFAILGAEYLLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH ++ FL P E+  + +R  ++  ++AG  + PLT R+ ++ D SVN++
Sbjct: 178 KGTHDYAKFLQPSEISAMGRRCGLETADIAGLEFQPLTQRFRITRDTSVNYL 229


>gi|417853445|ref|ZP_12498832.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. multocida str. Anand1_goat]
 gi|421263582|ref|ZP_15714617.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. multocida str. P52VAC]
 gi|338219595|gb|EGP05231.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. multocida str. Anand1_goat]
 gi|401689381|gb|EJS84831.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pasteurella
           multocida subsp. multocida str. P52VAC]
          Length = 242

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 137/246 (55%), Gaps = 19/246 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++   EL KF  +A +WWD +G +KP+H LNP RL++I        RK           
Sbjct: 2   QNIDQQELDKFEKMAKSWWDPQGDFKPIHQLNPLRLSYIAQQANGLTRK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETSTIEYCCTT 217
            ++DVGCGGGILSE +A+ GA VTGID     +++AR HA      +D +  TIE     
Sbjct: 51  KVLDVGCGGGILSESMAKQGAIVTGIDMSSAPLQVARKHALESGLHIDYQQITIEEFLQN 110

Query: 218 AEKLVEEQ---RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              L  E+    KFD +   E++EHV DP+        L    G    STINR+++A+A 
Sbjct: 111 QTALFAERGEDEKFDVITCMEMLEHVPDPSSIIACCKQLLKPNGVIFFSTINRTLKAWAL 170

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
            II AE++L  LPKGTH +  F+ P EL+     A +   +M G+ YNPLTG++ L+ D+
Sbjct: 171 VIIGAEYVLKMLPKGTHDYDKFIKPAELLHWCDEAQLTCLDMVGYHYNPLTGKFWLNKDV 230

Query: 335 SVNFIA 340
           S N++A
Sbjct: 231 SANYMA 236


>gi|239503763|ref|ZP_04663073.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter baumannii
           AB900]
 gi|421679503|ref|ZP_16119373.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC111]
 gi|410391039|gb|EKP43417.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC111]
          Length = 237

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPIEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTG 236


>gi|299772074|ref|YP_003734100.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           oleivorans DR1]
 gi|298702162|gb|ADI92727.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           oleivorans DR1]
          Length = 237

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 134/233 (57%), Gaps = 13/233 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  D     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQD-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVRACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++ 
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNADLTLKEMTGLHYNPLTKHYWLAPNVDVNYMV 230


>gi|87119284|ref|ZP_01075182.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas sp. MED121]
 gi|86165675|gb|EAQ66942.1| 3-demethylubiquinone-9 3-methyltransferase [Marinomonas sp. MED121]
          Length = 240

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 148/249 (59%), Gaps = 26/249 (10%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R  +I  R+ L               
Sbjct: 8   SNVDNAEIAKFEALASRWWDKESEFKPLHDINPLRTRYIDERAQLA-------------- 53

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH---ADLDPETSTIEYCCTT 217
           G   +D+GCGGGILSE +A+ GA V GID  E  + +ARLH   + LD     I+Y   T
Sbjct: 54  GKKTIDIGCGGGILSESMAQAGAQVKGIDMGEAPLGVARLHKLESQLD-----IDYERIT 108

Query: 218 AEKLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
           AE++ + E  ++D V   E++EHV DP+   ++   L    G    STINR+ +AY  A+
Sbjct: 109 AEEIADREAGQYDIVTCLEMLEHVPDPSSIIRACYKLVKPGGHVFFSTINRNPKAYLFAV 168

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DIS 335
           I AE++L+ LPKGTH ++ F+ P EL    + A +DV E+ G  YNP+T ++ L++ D+S
Sbjct: 169 IGAEYVLNMLPKGTHDYAKFIQPAELSNYARLAGLDVHELTGMTYNPITKQYRLNNKDVS 228

Query: 336 VNFIAFGTK 344
           VN++   TK
Sbjct: 229 VNYLMHTTK 237


>gi|402757599|ref|ZP_10859855.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. NCTC 7422]
          Length = 238

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 134/236 (56%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL ++   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWVDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  D     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQD-NVQNIEYRQIPVEQLAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLSLKEMTGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|82703304|ref|YP_412870.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosospira
           multiformis ATCC 25196]
 gi|109895674|sp|Q2Y6Z3.1|UBIG_NITMU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|82411369|gb|ABB75478.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosospira
           multiformis ATCC 25196]
          Length = 239

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 138/232 (59%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KF+ +A  WWD    +KPLH +NP RL +I     RH R          G +++DVG
Sbjct: 17  ELEKFNQLAHRWWDPNSEFKPLHEINPLRLGYID----RHAR--------LAGKDVLDVG 64

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +A  GA VTGID  +K +K+A+LH  L    + + Y  ++ E L  EQ   
Sbjct: 65  CGGGILSESMAESGAQVTGIDLGDKALKVAKLH--LLESGNKVNYRKSSVEALAAEQPHH 122

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    ++ + L    G    STINR+ ++Y  A+I AE++L+ LP
Sbjct: 123 YDVVTCMEMLEHVPDPVSTVRACAELAKPGGWVFFSTINRNPKSYLFAVIGAEYVLNLLP 182

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL  + + A +DV+E+ G  YNP+T  +SL  D  VN+I
Sbjct: 183 RGTHDYAKFIKPSELGRMAREAGLDVQEVIGMSYNPITKVYSLGQDTDVNYI 234


>gi|350553686|ref|ZP_08922851.1| 3-demethylubiquinone-9 3-methyltransferase [Thiorhodospira sibirica
           ATCC 700588]
 gi|349790070|gb|EGZ43994.1| 3-demethylubiquinone-9 3-methyltransferase [Thiorhodospira sibirica
           ATCC 700588]
          Length = 240

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 141/246 (57%), Gaps = 15/246 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P ++   ++A+FSA+A  WWD +G  +PLH +NP RL +I                P  G
Sbjct: 7   PQNVDPEQIARFSALAHRWWDPQGDLRPLHEINPLRLHYIDERA------------PLAG 54

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
             ++DVGCGGG+LSE +AR  A V GID  E  + +AR+HA    E   I+Y   T E+L
Sbjct: 55  QQVLDVGCGGGLLSEAMARCQAQVVGIDVGEDALAVARMHAQA--EGLAIDYRQITPEEL 112

Query: 222 -VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             +  ++FD +   E++EHV DPA    + + L    G    ST+NR+ +A+A AII AE
Sbjct: 113 STQSPQQFDIITCMEMLEHVPDPASVISACARLLKPGGQVFFSTLNRNPKAFALAIIGAE 172

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           ++L  +P+GTH+++ F+ P E+   +++A +  +E  G  Y+PL  R+ L+ DISVN+  
Sbjct: 173 YLLRMIPRGTHEYARFIKPVEMDRWIRQAGLKTREFTGLSYHPLMQRYRLTQDISVNYFV 232

Query: 341 FGTKNS 346
              K  
Sbjct: 233 HACKEQ 238


>gi|213968724|ref|ZP_03396866.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato T1]
 gi|301381339|ref|ZP_07229757.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060235|ref|ZP_07251776.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato K40]
 gi|302130024|ref|ZP_07256014.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|422658209|ref|ZP_16720645.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. lachrymans str. M302278]
 gi|38372568|sp|Q885T9.2|UBIG_PSESM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|213926657|gb|EEB60210.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. tomato T1]
 gi|331016838|gb|EGH96894.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. lachrymans str. M302278]
          Length = 232

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I  R+ L               
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERANLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAED 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ A
Sbjct: 106 LAEEMPEQFDVVTCLEMLEHVPDPSSVIRACHRMVKPGGQVFFSTINRNPKAYLFAVVGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 166 EYILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|221134589|ref|ZP_03560894.1| ubiquinone biosynthesis O-methyltransferase [Glaciecola sp.
           HTCC2999]
          Length = 244

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 142/240 (59%), Gaps = 4/240 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR-KDPYSARPFEGL 162
           ++ H E+ KF+AIA  WWD +G +KPLH +NP R+ +I   +    R  + Y      GL
Sbjct: 2   NVDHQEIEKFTAIASRWWDLDGEFKPLHQINPLRVDYIIGKITGKSRPNNGYPNNILNGL 61

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            IVD+GCGGGIL+E LA  GA V GID  E+++ +ARLHA L+     + Y    AE+  
Sbjct: 62  KIVDIGCGGGILAEALASHGAHVVGIDLAEESLTVARLHA-LETGLKNVTYELICAEEFA 120

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            +   +FD V   E++EHV DP    ++ + L         ST+NR+ ++Y  AI+ AE+
Sbjct: 121 SQNMEQFDVVTCLEMLEHVPDPGSIIEAAAFLAKPNAPVFFSTLNRNPKSYLMAIVGAEY 180

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           +++ +PKGTH +S F+ P EL+ ++    + +K   G  +NP+T  + LS+ +I VN+I 
Sbjct: 181 VMNLVPKGTHDFSKFIKPSELMRMIDNTPLTIKATTGLHFNPITQGYYLSNANIDVNYIV 240


>gi|381160228|ref|ZP_09869460.1| ubiquinone biosynthesis O-methyltransferase [Thiorhodovibrio sp.
           970]
 gi|380878292|gb|EIC20384.1| ubiquinone biosynthesis O-methyltransferase [Thiorhodovibrio sp.
           970]
          Length = 248

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 138/236 (58%), Gaps = 3/236 (1%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           S+   E+A F ++A  WWD +GP+ PLH LN  R  ++R   C    +     +PF GL 
Sbjct: 10  SIDPREVAHFESLAHRWWDEQGPFWPLHRLNSFRADYVRQQACSALGRPVGGEQPFAGLK 69

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGGILSE +AR+GA V GID  EKNI ++R+HA+       I+Y  TT E+L  
Sbjct: 70  VLDIGCGGGILSESVARLGARVQGIDIAEKNIHVSRIHAEWS--QLDIDYRLTTVEELSA 127

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
            + +FD V+  EV+EHV    EF    + L    G  V++TINR++ A+ TAII AE +L
Sbjct: 128 SRAQFDLVLNMEVVEHVERLPEFLGHCARLVRPGGVMVVATINRTLVAWLTAIIGAEWVL 187

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            WLPKGTH +   + P+E++  L  +   V +  G   NP    +  +  + VN++
Sbjct: 188 RWLPKGTHHFRKLVKPKEVITGLG-SQFRVLDRTGVRVNPFNRSFHDTPYMGVNYM 242


>gi|406036561|ref|ZP_11043925.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           parvus DSM 16617 = CIP 108168]
          Length = 237

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 134/233 (57%), Gaps = 13/233 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LSGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  +L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQSLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++ 
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPLTKHYWLAPNVDVNYMV 230


>gi|398899110|ref|ZP_10648798.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM50]
 gi|398183201|gb|EJM70695.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM50]
          Length = 232

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFKMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|352081090|ref|ZP_08951968.1| ubiquinone biosynthesis O-methyltransferase [Rhodanobacter sp.
           2APBS1]
 gi|351683131|gb|EHA66215.1| ubiquinone biosynthesis O-methyltransferase [Rhodanobacter sp.
           2APBS1]
          Length = 234

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 140/232 (60%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A+F ++A  WWD +G  +PLH LNP R A++ +      R D   A      N+ DVG
Sbjct: 10  EIARFDSLAARWWDPDGESRPLHDLNPVRAAYVAA------RVDLRRA------NVADVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKLVEEQRK 227
           CGGG+LSE LAR GA VTGID  EK I +A+LH  L      ++Y   ++AE    E   
Sbjct: 58  CGGGLLSEALARAGAKVTGIDLGEKVIDVAKLH--LHESGLDVDYRVQSSAELAAAEPAG 115

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FDAV   E+IEHV DPA     L+AL    G   +ST+NR+  A+  AI+ AE+++  LP
Sbjct: 116 FDAVCCMELIEHVPDPAALVNDLAALLKPGGRLFMSTLNRTPAAFGAAIVGAEYVMRLLP 175

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ FL P EL  +L+ A +++++++G  YNPL  +  LS   +VN++
Sbjct: 176 RGTHHYAQFLKPSELGRLLRHAGLELEDVSGLAYNPLNRKARLSSTTAVNYV 227


>gi|429335743|ref|ZP_19216363.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida CSV86]
 gi|428759633|gb|EKX81927.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida CSV86]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 143/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I  R++L               
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERASLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVK-VEYRQITAEA 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII A
Sbjct: 106 LAEEMPGQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 166 EYIMKLLPRGTHDFKKFIRPSELGAWSRAAGLSVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|380512829|ref|ZP_09856236.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           sacchari NCPPB 4393]
          Length = 245

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 138/242 (57%), Gaps = 17/242 (7%)

Query: 105 LKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNI 164
              AEL KF A+A  WWDA+GP KPLHALNP RL ++   L            P  G  +
Sbjct: 12  FDQAELDKFGALATRWWDADGPQKPLHALNPVRLRYVAERL------------PLRGATV 59

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVE 223
           +DVGCGGG+LSE LA+ GA VT ID   + IK+ARLH     E+   ++Y   + E L  
Sbjct: 60  LDVGCGGGLLSEALAKEGAQVTAIDLSPELIKVARLH---QFESGVEVDYRVQSVEDLAA 116

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
            Q   FDA+   E++EHV DPA   ++ + L    G   +ST+NR+  A+A AI+ AE++
Sbjct: 117 AQPGSFDAITCMEMLEHVPDPAAIVRACATLLKPGGQLFLSTLNRTPAAFALAIVGAEYV 176

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
              LP GTH++  F+ P EL   L++A + +++++G  Y P   R  LS    VN++A  
Sbjct: 177 ARLLPTGTHRYQDFIKPAELAAWLRQAELQLRDVSGLAYEPWRNRARLSSRTEVNYLACA 236

Query: 343 TK 344
            K
Sbjct: 237 AK 238


>gi|260220861|emb|CBA28851.1| 3-demethylubiquinone-9 3-methyltransferase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 257

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 144/238 (60%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  +KPLH +NP RLA+I++ +            P  G  +VDV
Sbjct: 30  AELAKFSELAHRWWDTESEFKPLHQINPLRLAWIQTLV------------PLAGKTMVDV 77

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++  AR GA V GID   K +K+A+LHA L+ ET  + Y   +AE L  E   
Sbjct: 78  GCGGGILADSAARQGAKVLGIDLSTKALKVAQLHA-LEAETPNVTYREVSAEALAAEAPG 136

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
             D V   E++EHV +PA   ++ + +    G    ST+NR+  ++  AI+ AE++L+ L
Sbjct: 137 SMDVVTCMEMLEHVPNPASVVEACARMVKPGGWVFFSTLNRNPMSFIQAIVGAEYVLNLL 196

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH+++  + P EL    + A ++++   G  YNPLT R+S++++  VN++ F T+
Sbjct: 197 PKGTHEYAKMIRPSELAHYCREAGLELQATKGLSYNPLTRRYSMNNNTQVNYL-FATR 253


>gi|160871768|ref|ZP_02061900.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsiella grylli]
 gi|159120567|gb|EDP45905.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsiella grylli]
          Length = 234

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 15/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF+A+AD WWD +GP KPLH +NP RL F+ +             +  +G  ++DV
Sbjct: 9   AEINKFTALADQWWDVDGPCKPLHIINPLRLEFLETW------------QTLKGKKVIDV 56

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGI +E +A+ GA VTGID     I +A+ HA        I+Y    AE     QR+
Sbjct: 57  GCGGGIFAEAMAQRGAEVTGIDKSGALIDVAKKHAA--DNQLPIDYFSAEAESFATHQRE 114

Query: 228 -FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV  P    ++ S L         STINR+ RAY  AI+ AEH+L  L
Sbjct: 115 SYDVVCCMELLEHVPCPLSLIQACSQLAKPNARIFFSTINRNPRAYFLAILGAEHLLKIL 174

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           P+GTH +  F+ P EL L  ++A + ++++ G  YNP+   ++LSDDI +N++A
Sbjct: 175 PRGTHDYKKFIRPSELALAGRKAYLTLQKLQGIHYNPILQHYALSDDIRINYLA 228


>gi|445491663|ref|ZP_21459894.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii AA-014]
 gi|444764201|gb|ELW88524.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii AA-014]
          Length = 237

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/239 (40%), Positives = 135/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLCMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVKTG 236


>gi|163856191|ref|YP_001630489.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella petrii DSM
           12804]
 gi|163259919|emb|CAP42220.1| 3-demethylubiquinone-9 3-methyltransferase [Bordetella petrii]
          Length = 242

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/234 (42%), Positives = 137/234 (58%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF+A+A  WWD E  +KPLHA+NP RL +I+             A    G  ++D
Sbjct: 17  QAELDKFAALAARWWDPESEFKPLHAINPLRLDWIQQC-----------AGSLTGKAVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +A  GA VTGID  E+++KIARLH  L+     +EY     E+L  EQ 
Sbjct: 66  VGCGGGILSESMAAAGARVTGIDLAERSLKIARLHG-LESGVQ-VEYRAVPVEELAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D V   E++EHV DP    ++ +AL    G    ST+NR+ +++  AII AE++L  
Sbjct: 124 GHYDIVTCMEMLEHVPDPGSVVRACAALAKPGGWVFFSTLNRNAKSFLYAIIGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH    F+ P EL    ++A +    M G  YNP+T  +SLS D SVN++
Sbjct: 184 LPRGTHSHEQFIKPSELAAAARQAGLQPTGMRGMEYNPITQVYSLSGDTSVNYL 237


>gi|146282667|ref|YP_001172820.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           A1501]
 gi|339494280|ref|YP_004714573.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           ATCC 17588 = LMG 11199]
 gi|386020951|ref|YP_005938975.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           DSM 4166]
 gi|166234772|sp|A4VLX7.1|UBIG_PSEU5 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|145570872|gb|ABP79978.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           A1501]
 gi|327480923|gb|AEA84233.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           DSM 4166]
 gi|338801652|gb|AEJ05484.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           ATCC 17588 = LMG 11199]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/245 (41%), Positives = 139/245 (56%), Gaps = 15/245 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKL 221
            ++D+GCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   T     
Sbjct: 50  KVIDIGCGGGILSEAMAQRGAQVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEAMA 107

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++ + L    G    STINR+ +AYA AII AE+
Sbjct: 108 AEAPEQFDVVTCLEMLEHVPDPASVIRACATLVKPGGQVFFSTINRNPKAYAFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++  
Sbjct: 168 VLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTKHYKLSADVDVNYMVQ 227

Query: 342 GTKNS 346
             K S
Sbjct: 228 TVKES 232


>gi|423096557|ref|ZP_17084353.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens Q2-87]
 gi|397888566|gb|EJL05049.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens Q2-87]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPAQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|15839061|ref|NP_299749.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           9a5c]
 gi|17369376|sp|Q9PAM5.1|UBIG_XYLFA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|9107668|gb|AAF85269.1|AE004055_7 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           9a5c]
          Length = 246

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/236 (40%), Positives = 137/236 (58%), Gaps = 15/236 (6%)

Query: 106 KHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIV 165
           + +EL KF+A    WWD  GP KPLHALNP RL +I   +            P  G  ++
Sbjct: 13  RQSELDKFAAFTSGWWDPHGPQKPLHALNPVRLDYISKRV------------PLSGARVL 60

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ 225
           DVGCGGG+LSE LAR GA VT ID   + IK+ARLH  L+     ++Y     E L+ EQ
Sbjct: 61  DVGCGGGLLSEALARQGAHVTAIDLAPELIKVARLHG-LE-SGIQVDYRIQAIEDLLAEQ 118

Query: 226 -RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++ 
Sbjct: 119 PAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVR 178

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+D   +N++A
Sbjct: 179 LLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTDRTDINYLA 234


>gi|407789369|ref|ZP_11136470.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Gallaecimonas
           xiamenensis 3-C-1]
 gi|407206727|gb|EKE76677.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Gallaecimonas
           xiamenensis 3-C-1]
          Length = 234

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 24/249 (9%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +NNN        + +AE+AKF A+A  WWD EG +KPLH LNP RL F+           
Sbjct: 1   MNNN--------VDNAEIAKFEAMAHRWWDKEGEFKPLHQLNPVRLGFVEEM-------- 44

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-I 211
              A    G  +VD+GCGGGILSE +AR+GA VTGID   + + +AR HA    E    +
Sbjct: 45  ---ADGLAGKRVVDIGCGGGILSESMARLGAVVTGIDMGGEPLNVARAHA---AEVGVDL 98

Query: 212 EYCCTTAEKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           +Y   TAE L EE   +FD V   E++EHV DP     + + L    G  V ST+NR+ +
Sbjct: 99  QYRQITAEALAEELPGQFDVVTCMEMLEHVPDPQSVVSACAKLCKPGGTLVFSTLNRTPK 158

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           A+A  + AAE IL WLP GTH +  F+ P EL+    +A I  ++  G  YN  TG+++ 
Sbjct: 159 AWALGVFAAERILRWLPAGTHDYHKFIKPAELMGFCDQAGIVSEKAVGMSYNLFTGQFNR 218

Query: 331 SDDISVNFI 339
           S  + +N++
Sbjct: 219 SARLDMNYL 227


>gi|167032368|ref|YP_001667599.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           GB-1]
 gi|189037624|sp|B0KTX4.1|UBIG_PSEPG RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|166858856|gb|ABY97263.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas putida
           GB-1]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I  R++L               
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDERASLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEA 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ A
Sbjct: 106 LAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 166 EYILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLNSDVDVNYM 225


>gi|406598464|ref|YP_006749594.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Alteromonas macleodii ATCC 27126]
 gi|407685455|ref|YP_006800629.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Alteromonas macleodii str. 'English Channel 673']
 gi|406375785|gb|AFS39040.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas macleodii ATCC 27126]
 gi|407247066|gb|AFT76252.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas macleodii str. 'English Channel 673']
          Length = 250

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 145/245 (59%), Gaps = 4/245 (1%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +  K +  S+    E+A+F A+AD+WWD EG YK     N  RL  I++ +  HF +   
Sbjct: 3   DKSKKTGDSNFSEQEIARFDALADSWWDPEGKYKTALDFNRARLNVIKAQIENHFGQGNL 62

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
               +  L+++D+G GGG++SEPLA++GA VTGIDA   ++++A+ HA        ++Y 
Sbjct: 63  PP-DYSALSVIDIGSGGGLISEPLAKLGAQVTGIDASAVSVEVAKRHAQ--NTGVKVDYQ 119

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              + ++VEE R++D VI +EV+EHV D  +  +  ++L    G  +++T+NR++++Y  
Sbjct: 120 HKLSSEVVEEGRQYDVVINAEVVEHVPDQQQLMRECASLVKPGGLLILATLNRTLKSYVV 179

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE+++ +LP GTH W  F+ P EL   +      +K   G   NPL G W  +  +
Sbjct: 180 AIVGAEYVMRYLPIGTHDWKKFVKPGELKRWIGN-EFTLKYQVGMRLNPLKGEWLTTSSL 238

Query: 335 SVNFI 339
           +VN+I
Sbjct: 239 AVNYI 243


>gi|407716516|ref|YP_006837796.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Cycloclasticus
           sp. P1]
 gi|407256852|gb|AFT67293.1| Bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Cycloclasticus
           sp. P1]
          Length = 236

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+ KFSA+A  WWD EG +K LH +NP RL  +  T+               G +++DV
Sbjct: 11  SEIEKFSAMASQWWDTEGNFKTLHQINPLRLNLVDKTV------------SLSGKDVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGILSE +A  GA VTGID  ++ + +A LH+ LD   S + Y   + E L  ++  
Sbjct: 59  GCGGGILSESMALKGANVTGIDLGKELLDVADLHS-LDSGVS-VNYQHISVEALASQKPE 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DP     + S L    G   +ST+NR+ +AY  +II AE+IL  +
Sbjct: 117 QFDCVTCMEMLEHVPDPVAIINACSTLVKPGGYVFLSTLNRNPKAYLLSIIGAEYILGMM 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH ++SF+ P EL L  ++A + +++  G  YNP    +S+SDDISVN+I    K
Sbjct: 177 PKGTHDYASFIKPSELALWARQAGLTLEDSRGIEYNPFNKSFSMSDDISVNYICVFKK 234


>gi|332529394|ref|ZP_08405355.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Hylemonella
           gracilis ATCC 19624]
 gi|332041192|gb|EGI77557.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Hylemonella
           gracilis ATCC 19624]
          Length = 245

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 142/233 (60%), Gaps = 8/233 (3%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +  ++PLH +NP RL ++   +         S +   G  ++DV
Sbjct: 11  AELAKFSELAHRWWDPQSEFRPLHEINPLRLNWLSGLVAEG------SGKGLAGKAVLDV 64

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC-CTTAEKLVEEQR 226
           GCGGGIL++ +AR GA VTGID   K +K+A+LHA L+  T  I Y   +      E   
Sbjct: 65  GCGGGILADSMARAGAQVTGIDLSTKALKVAQLHA-LEAGTPNINYREISAEALAAEAPA 123

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ S L    G    STINR+ +++  AI+ AE++L+ L
Sbjct: 124 SFDVVTCMEMLEHVPDPASVVRACSTLVKPGGWVFFSTINRNPKSFLFAIVGAEYVLNLL 183

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH+++ F+ P EL   ++ A ++++   G  YNPLT R++L+DD SVN++
Sbjct: 184 PRGTHEYAKFIRPSELARDVRDAGLELRASRGMGYNPLTRRYALNDDTSVNYL 236


>gi|262370969|ref|ZP_06064292.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter johnsonii
           SH046]
 gi|262314045|gb|EEY95089.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter johnsonii
           SH046]
          Length = 238

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 136/237 (57%), Gaps = 13/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEAFAAIWWDQHSEFRPLHMINPLRLNWIDE-----------HAGGLNGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA+ +     IEY     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGEAPLNVARLHAEQE-GVEHIEYRQIPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV +PA   ++   L    G    STINR+ +AY  AII AE++L  L 
Sbjct: 118 YDVVTCMEMLEHVPNPASIIEACHKLVKPGGHVFFSTINRNPKAYLFAIIGAEYVLRMLA 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +  F+ P EL   ++ A + +K+M G  YNPLT R+ L+ ++ VN++ +  K
Sbjct: 178 KGTHDYQKFIKPSELAHDIRGAGLKLKDMTGLHYNPLTKRYWLAPNVDVNYMVYTVK 234


>gi|427425820|ref|ZP_18915894.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-136]
 gi|425697346|gb|EKU67028.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii WC-136]
          Length = 237

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 134/232 (57%), Gaps = 13/232 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     I+Y     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIQYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  AL    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQALVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH +  F+ P E+   ++ A + +KEM G  YNPLT  + L+ ++ VN++
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPLTKHYWLAPNVDVNYM 229


>gi|442565356|dbj|BAM75670.1| hypothetical 3-demethylubiquinone-9 3-methyltransferase [uncultured
           microorganism]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 139/239 (58%), Gaps = 13/239 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF+A+A  WWD    +KPLH +NP RL +I+       R D        G 
Sbjct: 2   SNVDFNEVDKFAALASRWWDKNSEFKPLHDINPLRLNYIKE------RCD----NSLSGK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGGILSE +A  GA VTGID  E  +++A+LH  L      ++Y     E+L 
Sbjct: 52  KILDVGCGGGILSEAMAAEGADVTGIDMAEAGLEVAKLH--LLESGHQVDYQKIPVEELA 109

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E  + KFD V   E++EHV DP+   K+ + L    G   +STINR+ ++Y  AI+ AE+
Sbjct: 110 ETHEGKFDVVTCLEMLEHVPDPSSIIKACAKLVKPGGHIFLSTINRNAKSYLFAIVGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           IL  LP+GTH W  F+ P E+    + +++ +K M G  YNP T  + L DD+SVN++ 
Sbjct: 170 ILKLLPQGTHDWDKFIQPSEMDEWARESNMALKGMIGMTYNPFTKVYKLEDDVSVNYLC 228


>gi|398850870|ref|ZP_10607565.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM80]
 gi|398247718|gb|EJN33153.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM80]
          Length = 232

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEDLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|319792465|ref|YP_004154105.1| ubiquinone biosynthesis o-methyltransferase [Variovorax paradoxus
           EPS]
 gi|315594928|gb|ADU35994.1| ubiquinone biosynthesis O-methyltransferase [Variovorax paradoxus
           EPS]
          Length = 242

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 144/238 (60%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I           P S R      +VD+
Sbjct: 10  AELAKFSELAHRWWDLESEFRPLHEINPLRLEWIDGI-------APISQR-----RVVDI 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +K+A+LHA L+  T  ++Y   +AE L  EQ  
Sbjct: 58  GCGGGILADSMARKGAEVLGIDLAGKALKVAQLHA-LEAGTRGVKYREISAEALAAEQPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV  PA   ++ + L    G    STINR+++++A AI+ AE+IL  L
Sbjct: 117 SFDVVTCMEMLEHVPKPASVIQACATLVKPGGWVFFSTINRNLKSFALAIVGAEYILGML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           P+GTH+++  + P EL    + A +D++   G  +NPLT R+ LS D SVN++ F T+
Sbjct: 177 PRGTHEYAKLIRPSELASYCRAAGLDLRHARGMEHNPLTRRYWLSADTSVNYM-FATQ 233


>gi|268598048|ref|ZP_06132215.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268582179|gb|EEZ46855.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           MS11]
          Length = 242

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FD V   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 GAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|440730084|ref|ZP_20910183.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           translucens DAR61454]
 gi|440379710|gb|ELQ16298.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Xanthomonas
           translucens DAR61454]
          Length = 245

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 144/251 (57%), Gaps = 15/251 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N    +A ++   AEL KF A+A  WWDA+GP KPLHALNP RL ++   L         
Sbjct: 2   NASTANASANFDQAELDKFGALATRWWDADGPQKPLHALNPVRLRYVAERLS-------- 53

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G +++DVGCGGG+LSE LA+ GA VT ID   + +K+ARLH  L+     ++Y 
Sbjct: 54  ----LRGTSVLDVGCGGGLLSEALAKEGAQVTAIDLAPELVKVARLH-QLESGVE-VDYR 107

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             + E L  E+   FDA+   E++EHV DPA   ++ + L    G   +ST+NR+  A+A
Sbjct: 108 VQSVEDLAAERPGSFDAITCMEMLEHVPDPAAIVRACARLLKPGGQLFLSTLNRTPAAFA 167

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE++   LP GTH++  F+ P EL   L++A + + +++G +Y P   R  LS  
Sbjct: 168 LAIVGAEYVARLLPTGTHRYQDFIKPAELAAWLRQAELQLHDVSGMLYEPWRNRARLSTR 227

Query: 334 ISVNFIAFGTK 344
             VN++A   K
Sbjct: 228 TDVNYLACALK 238


>gi|422297737|ref|ZP_16385365.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas avellanae
           BPIC 631]
 gi|422590060|ref|ZP_16664718.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. morsprunorum str. M302280]
 gi|422651719|ref|ZP_16714511.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. actinidiae str. M302091]
 gi|330877044|gb|EGH11193.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. morsprunorum str. M302280]
 gi|330964794|gb|EGH65054.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. actinidiae str. M302091]
 gi|407990789|gb|EKG32799.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas avellanae
           BPIC 631]
          Length = 232

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACHRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|388545953|ref|ZP_10149232.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           M47T1]
 gi|388276070|gb|EIK95653.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           M47T1]
          Length = 232

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I              AR   G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPMRVNWIDE-----------RAR-LSGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ ++Y  AII AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACFKMVKPGGQVFFSTINRNPKSYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  +P+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILKLMPRGTHDFKKFIRPSELGAWARAAGLSVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|237799015|ref|ZP_04587476.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331021869|gb|EGI01926.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 232

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 143/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I  R++L               
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERASLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAED 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           + EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A+I A
Sbjct: 106 MAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVIGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 166 EYILGLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDITGLTYNPLTKHYKLASDVDVNYM 225


>gi|325276960|ref|ZP_08142641.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           TJI-51]
 gi|324097902|gb|EGB96067.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas sp.
           TJI-51]
          Length = 232

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 142/240 (59%), Gaps = 19/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI--RSTLCRHFRKDPYSARPFE 160
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I  R++L               
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDERASLA-------------- 47

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           G  ++DVGCGGGILSE +A  GA+VTGID  E  + +A+LH  L+     +EY   TAE 
Sbjct: 48  GKKVLDVGCGGGILSEAMALRGASVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEA 105

Query: 221 LVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           L EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ A
Sbjct: 106 LAEEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGA 165

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E+IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++
Sbjct: 166 EYILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLSSDVDVNYM 225


>gi|239814629|ref|YP_002943539.1| 3-demethylubiquinone-9 3-methyltransferase [Variovorax paradoxus
           S110]
 gi|239801206|gb|ACS18273.1| ubiquinone biosynthesis O-methyltransferase [Variovorax paradoxus
           S110]
          Length = 242

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 144/239 (60%), Gaps = 15/239 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +  ++PLH +NP RL +I           P S R      ++D+
Sbjct: 10  AELAKFSELAHRWWDLDSEFRPLHEINPLRLEWIDGI-------APISQR-----RVLDI 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +K+ARLHA L+  T  ++Y   +AE L  EQ  
Sbjct: 58  GCGGGILADSMARKGADVLGIDLASKALKVARLHA-LEAGTQGVKYREVSAEALAAEQPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV +PA   ++ + L    G    STINR+++++  AI+ AE++L  L
Sbjct: 117 SFDVVTCMEMLEHVPEPASIVQACATLVKPGGWVFFSTINRNLKSFMLAIVGAEYVLGML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           P+GTH+++  L P EL    + A +D++   G  +NPLT R+ LS D SVN++ F T+ 
Sbjct: 177 PRGTHEYAKLLRPSELAAHCRAAGLDLRHTRGMEHNPLTRRYWLSADTSVNYM-FATQK 234


>gi|289623728|ref|ZP_06456682.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. aesculi str. NCPPB 3681]
 gi|289648170|ref|ZP_06479513.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|422581245|ref|ZP_16656388.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330866095|gb|EGH00804.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 232

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAKLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|433676646|ref|ZP_20508733.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas translucens
           pv. translucens DSM 18974]
 gi|430818237|emb|CCP39046.1| 3-demethylubiquinone-9 3-methyltransferase [Xanthomonas translucens
           pv. translucens DSM 18974]
          Length = 245

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 140/239 (58%), Gaps = 15/239 (6%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF A+A  WWDA+GP KPLHALNP RL ++   L            P  G +++D
Sbjct: 14  QAELDKFGALATRWWDADGPQKPLHALNPVRLRYVAERL------------PLRGASVLD 61

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGG+LSE LA+ GA VT ID   + +K+ARLH  L+     ++Y   + E L  E+ 
Sbjct: 62  VGCGGGLLSEALAKEGAQVTAIDLAPELVKVARLH-QLESGVE-VDYRLQSVEDLAAERP 119

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FDA+   E++EHV DPA   ++ + L    G   +ST+NR+  A+A AI+ AE++   
Sbjct: 120 GSFDAITCMEMLEHVPDPAAIVRACARLLKPGGQLFLSTLNRTPAAFALAIVGAEYVARL 179

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           LP GTH++  F+ P EL   L++A + + +++G +Y P   R  LS    VN++A   K
Sbjct: 180 LPTGTHRYQDFIKPAELAAWLRQAELQLHDVSGMLYEPWRNRARLSTRTEVNYLACALK 238


>gi|298157291|gb|EFH98374.1| Ubiquinone biosynthesis SAM-dependent O-methyltransferase
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 239

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 9   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 56

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 57  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 114

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 115 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 174

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 175 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 232


>gi|126665970|ref|ZP_01736950.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter sp. ELB17]
 gi|126629292|gb|EAZ99909.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter sp. ELB17]
          Length = 254

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 145/251 (57%), Gaps = 21/251 (8%)

Query: 96  NKKHSAPSSLKHA----ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           N  HS+ S+L H     E+AKF A+A  WWD    +KPLH +NP RL +I   +      
Sbjct: 9   NSDHSSDSNLNHNVDRNEIAKFEALASRWWDPGSEFKPLHDINPLRLNYIDERVS----- 63

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
                    G  ++D+GCGGG+LSE +AR GA VTGID  E  + +ARLH  L+     +
Sbjct: 64  -------LPGKKVIDIGCGGGLLSEGMARRGAHVTGIDMGEAPLSVARLHG-LESGVQ-V 114

Query: 212 EYCCTTAEKLVEEQR---KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
           +Y   T E++  + +   ++D V   E++EHV DP    ++ ++L    G   +STINR+
Sbjct: 115 DYQKITVEEMARDPQHAGQYDVVTCLEMLEHVPDPGSVIRACASLLKPGGHLFVSTINRN 174

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
            +++  AII AE++L  LPKGTH+W  F+ P E+   L+ A +D++E+ G  YN LT  +
Sbjct: 175 PKSFLFAIIGAEYVLSLLPKGTHEWKKFIRPSEMSDHLRNAGLDIRELTGMTYNLLTKVY 234

Query: 329 SLSDDISVNFI 339
            L  ++ VN++
Sbjct: 235 KLGRNVDVNYM 245


>gi|90581241|ref|ZP_01237039.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium angustum
           S14]
 gi|90437612|gb|EAS62805.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio angustum S14]
          Length = 236

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 147/249 (59%), Gaps = 16/249 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P ++  AE++KF  +A  WWD EG +KPLH +NP RL ++              A   
Sbjct: 2   SKPQNVDPAEISKFEEMASRWWDLEGEFKPLHQINPLRLNYVID-----------HANGL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G  ++DVGCGGGIL+E +A  GA VTG+D  ++ + +ARLHA    ET T ++Y  +TA
Sbjct: 51  FGKKVLDVGCGGGILAESMAIEGAEVTGLDMGKEPLTVARLHA---LETGTKLDYIQSTA 107

Query: 219 EKLVEEQRKF-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+  +E+  + D +   E++EHV DPA    + + +    G    ST+NR++++Y  AI+
Sbjct: 108 EEHADERHGYYDVITCMEMLEHVPDPASIISACAKMVKPGGHVFFSTLNRNIKSYLFAIV 167

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AEH++  +PKGTH  + F+ P EL+ ++ +  ++ + + G  YNPLT  +SL  ++ VN
Sbjct: 168 GAEHVMRIVPKGTHDHNKFIRPSELIAMIDKTELEERHIIGLHYNPLTNAYSLGSNVDVN 227

Query: 338 FIAFGTKNS 346
           +I    K +
Sbjct: 228 YIVHTQKQN 236


>gi|375105133|ref|ZP_09751394.1| ubiquinone biosynthesis O-methyltransferase [Burkholderiales
           bacterium JOSHI_001]
 gi|374665864|gb|EHR70649.1| ubiquinone biosynthesis O-methyltransferase [Burkholderiales
           bacterium JOSHI_001]
          Length = 233

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 138/237 (58%), Gaps = 14/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WWD +G +KPLH +NP RL +I                P  G  ++DVG
Sbjct: 8   ELAKFSDLAHRWWDRDGEFKPLHQINPLRLNWIEQL------------APLVGRRVLDVG 55

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E +A  GA V GID  +K +K+A+LHA ++     ++Y     E L  E    
Sbjct: 56  CGGGILAESMAGRGAQVLGIDLADKPLKVAQLHA-MEAGIDGLDYRAVAVEALAAEMPAS 114

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV +P    ++ +AL    G    ST+NR+ +A+  AI+ AEH+L  LP
Sbjct: 115 FDRVTCMEMLEHVPEPESVVRACAALVKPGGQVFFSTLNRNAKAFLFAIVGAEHLLRMLP 174

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH+++ F+ P EL    + A + V E  G  YNPLT R+ LSDD SVN++   T+
Sbjct: 175 KGTHEYAKFIKPSELARWCREAGLQVDEFKGMNYNPLTQRYGLSDDTSVNYLLACTR 231


>gi|339484011|ref|YP_004695797.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas sp.
           Is79A3]
 gi|338806156|gb|AEJ02398.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas sp.
           Is79A3]
          Length = 235

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 136/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD    +KPLH +NP RL +I   +              EG  ++DVG
Sbjct: 12  ELEKFSQLAHRWWDPNSEFKPLHEINPLRLNYIDELV-----------DGLEGKTVLDVG 60

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +   GA VTGID  +K +K+A+LH  L      ++Y   T E L +EQ + 
Sbjct: 61  CGGGILSEGMVSKGAHVTGIDLSDKALKVAKLH--LLESGHQVDYRKITVESLAKEQPQH 118

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    +S + L   +G    STINR+ +AY  AII AE++L  LP
Sbjct: 119 YDVVTCMEMLEHVPDPMSVIRSCTQLAKPKGWVFFSTINRNPKAYLFAIIGAEYVLKLLP 178

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH+++ F+ P EL  + + A +  +++ G  YNP+T  ++L DD  VN+I
Sbjct: 179 RGTHEYAKFIKPSELARMARNAGLTDEKLIGMTYNPITKVYALEDDTDVNYI 230


>gi|311104907|ref|YP_003977760.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310759596|gb|ADP15045.1| 3-demethylubiquinone-9 3-O-methyltransferase [Achromobacter
           xylosoxidans A8]
          Length = 242

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/234 (41%), Positives = 138/234 (58%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF A+A  WWD E  +KPLHA+NP RL +I+             A    G  ++D
Sbjct: 17  QAELDKFGALASRWWDPESEFKPLHAINPLRLEWIQEC-----------AGSLAGKKVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +A  GA VTGID  +K++K+ARLH  L+     +EY     E+L  EQ 
Sbjct: 66  VGCGGGILSEAMAHSGAEVTGIDLADKSLKVARLHG-LESGVK-VEYRKVPVEELAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ S L    G    ST+NR+ +++  AI+ AE++L  
Sbjct: 124 GQYDVVTCMEMLEHVPDPASIVRACSTLVKPGGWVFFSTLNRNPKSFLFAIVGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH +  F+ P EL    + A ++   M G  YNP+T  ++LS D SVN++
Sbjct: 184 LPRGTHSYDQFIKPSELSAAARGARLEPVSMRGMEYNPITQIYTLSSDTSVNYL 237


>gi|89074075|ref|ZP_01160576.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium sp.
           SKA34]
 gi|89050213|gb|EAR55724.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium sp.
           SKA34]
          Length = 236

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 147/249 (59%), Gaps = 16/249 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P ++  AE++KF  +A  WWD EG +KPLH +NP RL ++              A   
Sbjct: 2   SKPLNVDPAEISKFEDMASRWWDLEGEFKPLHQINPLRLNYVID-----------HANGL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G  ++DVGCGGGIL+E +A  GA VTG+D  ++ + +ARLHA    ET T ++Y  +TA
Sbjct: 51  FGKKVLDVGCGGGILAESMAIEGAEVTGLDMGKEPLTVARLHA---LETGTKLDYIQSTA 107

Query: 219 EKLVEEQRKF-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+  +E+  + D +   E++EHV DPA    + + +    G    ST+NR++++Y  AI+
Sbjct: 108 EEHADERHGYYDVITCMEMLEHVPDPASIIAACAKMVKPGGHIFFSTLNRNLKSYLFAIV 167

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AEH++  +PKGTH  + F+ P EL+ ++ +  ++ + + G  YNPLT  +SL  ++ VN
Sbjct: 168 GAEHVMRIVPKGTHDHNKFIRPSELIAMVDKTELEERHITGLHYNPLTNAYSLGSNVDVN 227

Query: 338 FIAFGTKNS 346
           +I    K S
Sbjct: 228 YIVHTQKQS 236


>gi|398807960|ref|ZP_10566830.1| ubiquinone biosynthesis O-methyltransferase [Variovorax sp. CF313]
 gi|398088591|gb|EJL79149.1| ubiquinone biosynthesis O-methyltransferase [Variovorax sp. CF313]
          Length = 242

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 144/238 (60%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD E  ++PLH +NP RL +I           P S R      ++D+
Sbjct: 10  AELAKFSELAHRWWDLESEFRPLHEINPLRLDWIDGIA-------PISQR-----RVLDI 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +K+A+LHA L+  T  ++Y   +AE L  EQ  
Sbjct: 58  GCGGGILADSMARKGAEVLGIDLAGKALKVAQLHA-LEAGTRGVKYREISAEALAAEQPG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV  PA   ++ SAL    G    STINR+++++  AI+ AE++L  L
Sbjct: 117 SFDVVTCMEMLEHVPQPASVIQACSALVKPGGWVFFSTINRNLKSFMFAIVGAEYVLGML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           P+GTH+++  + P EL    + A +D++   G  +NPLT R+ LS D SVN++ F T+
Sbjct: 177 PRGTHEYAKLIRPSELAGYCRAAGLDLRHTRGMEHNPLTRRYWLSGDTSVNYM-FATQ 233


>gi|26988496|ref|NP_743921.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           KT2440]
 gi|148549155|ref|YP_001269257.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida F1]
 gi|386013363|ref|YP_005931640.1| protein UbiG [Pseudomonas putida BIRD-1]
 gi|395444844|ref|YP_006385097.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida ND6]
 gi|397695762|ref|YP_006533645.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           DOT-T1E]
 gi|421522468|ref|ZP_15969109.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida LS46]
 gi|38372570|sp|Q88M10.1|UBIG_PSEPK RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|166234771|sp|A5W7G3.1|UBIG_PSEP1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|24983260|gb|AAN67385.1|AE016364_10 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           KT2440]
 gi|148513213|gb|ABQ80073.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida F1]
 gi|313500069|gb|ADR61435.1| UbiG [Pseudomonas putida BIRD-1]
 gi|388558841|gb|AFK67982.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida ND6]
 gi|397332492|gb|AFO48851.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas putida
           DOT-T1E]
 gi|402753568|gb|EJX14061.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           putida LS46]
          Length = 232

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 139/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDERVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVQ-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLLAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILKMLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLNSDVDVNYM 225


>gi|387129951|ref|YP_006292841.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga sp. JAM7]
 gi|386271240|gb|AFJ02154.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga sp. JAM7]
          Length = 234

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ HAE+AKF A+AD+WWD EG  KPLH +NP RL FI+  L               G+
Sbjct: 4   DNVDHAEVAKFDALADSWWDPEGQSKPLHQINPLRLKFIQDALS------------LPGV 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL- 221
           N +DVGCGGGILSE LA+ GA V GID  +  ++IA LHA L+    T++Y   TAE + 
Sbjct: 52  NAIDVGCGGGILSESLAQAGAIVKGIDMGKLPLEIAHLHA-LE-SGVTVDYEQITAEAMA 109

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           + +  +FD V   E++EHV DP    ++ + +    G    ST+NR  +A+  A+  AE+
Sbjct: 110 IRQPGEFDLVTCMEMLEHVPDPKAIIEACATMVKPGGDVFFSTLNRHPKAWLLAVFGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           ++  LPKGTH ++ F+ P EL    +   + +  M+G  Y PL  R+ L +D+ VN++
Sbjct: 170 VMQMLPKGTHDYARFIKPSELAAACREYGLSLVRMSGIRYAPLQQRFELDNDVDVNYL 227


>gi|422111214|ref|ZP_16380918.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309378273|emb|CBX23104.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 238

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 7   NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 54

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 55  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 113

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FDAV   E++EHV DPA   ++ + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 114 GAEPHSFDAVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 173

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P +L  + ++A +DV E  G  ++ L+  ++L D   VN++
Sbjct: 174 LLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTFSVLSQTYALCDSTDVNYM 231


>gi|422596370|ref|ZP_16670652.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|422605695|ref|ZP_16677708.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. mori str. 301020]
 gi|422683606|ref|ZP_16741865.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. tabaci str. ATCC 11528]
 gi|330889350|gb|EGH22011.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. mori str. 301020]
 gi|330986669|gb|EGH84772.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331012939|gb|EGH92995.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. tabaci str. ATCC 11528]
          Length = 232

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|398868654|ref|ZP_10624050.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM78]
 gi|398232867|gb|EJN18819.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM78]
          Length = 232

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|148653914|ref|YP_001281007.1| 3-demethylubiquinone-9 3-methyltransferase [Psychrobacter sp.
           PRwf-1]
 gi|148572998|gb|ABQ95057.1| 3-demethylubiquinone-9 3-methyltransferase [Psychrobacter sp.
           PRwf-1]
          Length = 262

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 150/254 (59%), Gaps = 7/254 (2%)

Query: 87  AENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLC 146
           A +++   +N   +  +++  +E+ KF+ +A  WWD +GP+  LH +NP RL +I   + 
Sbjct: 8   ATSNTAATDNTASNLGNNVDMSEVGKFTQLASQWWDKQGPFATLHQINPLRLNWIEENVI 67

Query: 147 RHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP 206
           R      Y+     G  ++DVGCGGGIL+E +AR GA  TG+D   +N++ A +HA+   
Sbjct: 68  R------YTGTGLTGKTVLDVGCGGGILTESMARRGADATGVDLGLENLQAATIHAEQSG 121

Query: 207 ETSTIEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTI 265
            T  + Y     E+L  EQ + +D +   E++EHV DP++  ++   L    G  V+STI
Sbjct: 122 LTDRLRYKHIAIEQLAAEQPQSYDVITCMEMLEHVPDPSQIVQACYDLLKPGGVCVLSTI 181

Query: 266 NRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLT 325
           NR+ ++Y  AII AE++L  L +GTH ++ F+TP EL  +   A  + +++ G  YNP+T
Sbjct: 182 NRNPKSYLFAIIGAEYVLRLLDRGTHDYAKFITPAELDKMAINAGFNRQDLIGLHYNPIT 241

Query: 326 GRWSLSDDISVNFI 339
            R+ L+ ++ VN++
Sbjct: 242 KRYWLAQNVDVNYM 255


>gi|389871930|ref|YP_006379349.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Advenella
           kashmirensis WT001]
 gi|388537179|gb|AFK62367.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Advenella
           kashmirensis WT001]
          Length = 241

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 145/247 (58%), Gaps = 18/247 (7%)

Query: 98  KHSAPSSL----KHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           + S PSSL      AEL KF  +A  WWD    +KPLHA+NP RL +I S          
Sbjct: 3   QTSTPSSLPVNASQAELDKFGDLAAKWWDPTSEFKPLHAINPLRLEWISSL--------- 53

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
             A    G  I+DVGCGGGIL+E +A  GA+VTGID  +K++ +ARLH  L+     +EY
Sbjct: 54  --AGGLGGKTIIDVGCGGGILAESMAASGASVTGIDLAQKSLNVARLHG-LESGVQ-VEY 109

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              +AE++  E+  ++D V   E++EHV DP    ++ + L    G    ST+NR+ +++
Sbjct: 110 RNISAEQIASERPAQYDIVTCMEMLEHVPDPGSIVRACATLVKPGGLVFFSTLNRNFKSF 169

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             AI+ AE++L+ LP+ TH  SSF+ P EL    + A ++   M G  YNP+T  +SLS+
Sbjct: 170 LFAIVGAEYVLNLLPRNTHNHSSFIRPSELAASARNAGLEPMAMKGMQYNPITDVYSLSN 229

Query: 333 DISVNFI 339
           D SVN++
Sbjct: 230 DTSVNYL 236


>gi|334345256|ref|YP_004553808.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium
           chlorophenolicum L-1]
 gi|334101878|gb|AEG49302.1| ubiquinone biosynthesis O-methyltransferase [Sphingobium
           chlorophenolicum L-1]
          Length = 245

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 142/241 (58%), Gaps = 6/241 (2%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           ++A S++   E A F ++A  WWD +G    LH LNP RL +IR  L RH+     S RP
Sbjct: 3   NTASSTIDPREAAHFGSMAADWWDPKGSSAMLHKLNPVRLRYIRDALDRHWPGHDQSFRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             G   +DVGCG G+L+EPLARMGA +T +DA E+NI +AR HA  + +  TI+Y  T  
Sbjct: 63  LAGRRALDVGCGAGLLAEPLARMGAALTALDAAEENIAVARSHA--EAQGLTIDYRATPV 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L  E   FD V + EVIEHVADPA F  +L+      G  ++ST NR+  +    I  
Sbjct: 121 EQL--EDSGFDLVTSMEVIEHVADPAAFIAALAQKLAPGGLMILSTPNRTPLSRLAMITI 178

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
            E I   +PKGTH W  F+ P+EL  +L+ A ++V + AG  + P  G + LS   ++N+
Sbjct: 179 GESI-GGIPKGTHDWHKFINPDELTKLLEDAGLEVIDSAGLSFTPAKG-FILSSSKAINY 236

Query: 339 I 339
           +
Sbjct: 237 L 237


>gi|330808284|ref|YP_004352746.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|423696074|ref|ZP_17670564.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens Q8r1-96]
 gi|327376392|gb|AEA67742.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|388003200|gb|EIK64527.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas
           fluorescens Q8r1-96]
          Length = 232

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRAAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|397170585|ref|ZP_10493998.1| 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy
           phenol methylase [Alishewanella aestuarii B11]
 gi|396087828|gb|EJI85425.1| 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy
           phenol methylase [Alishewanella aestuarii B11]
          Length = 242

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 143/253 (56%), Gaps = 14/253 (5%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +N+       S++   E++KF+ IA  WWD EG +KPLH LNPTRL +I   L   F   
Sbjct: 1   MNSPDNFDKNSNVDQNEISKFNEIAARWWDPEGEFKPLHLLNPTRLGYISDQLGGLF--- 57

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                   G N +DVGCGGGIL+E +AR GA VTGID     + +ARLHA L+   + I+
Sbjct: 58  --------GRNTLDVGCGGGILAESMARAGAKVTGIDMAPDGLNVARLHA-LEAGVN-ID 107

Query: 213 YCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y  +TAE   E    +F+ V   E++EHV DPA   ++ + L       V STIN++ +A
Sbjct: 108 YQQSTAEDFAERHAGEFELVTCMEMLEHVPDPASVVRACAELAAPGATLVFSTINKTAKA 167

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y  AI+ AE++L  +P+GTHQ+  F+ P  L+  ++ A +++ +  G  +NPL   + L 
Sbjct: 168 YLFAIVGAEYLLKLVPRGTHQFDKFIRPSVLMRYIEDAGLELVDATGLHFNPLNNSFKLG 227

Query: 332 DDISVNFIAFGTK 344
             + VN+     K
Sbjct: 228 AGLDVNYFVVARK 240


>gi|241742417|ref|XP_002414170.1| dihydroxypolyprenylbenzoate methyltransferase, putative [Ixodes
           scapularis]
 gi|215508024|gb|EEC17478.1| dihydroxypolyprenylbenzoate methyltransferase, putative [Ixodes
           scapularis]
          Length = 247

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 135/218 (61%), Gaps = 5/218 (2%)

Query: 90  HSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF 149
           H  +     + + S++     +KF A+A  WWD EG +  L  +N  R+  IR  L +  
Sbjct: 22  HLSMTTPTANPSQSTVFEENRSKFDALAHRWWDPEGEFSTLSRMNTLRVPLIRDGLLQTR 81

Query: 150 R---KDPYS-ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLD 205
           +   K P S A+P  GL I+DVGCGGG+LSEPLAR+GATVTGID    +I++AR HA+ D
Sbjct: 82  QPGEKVPKSLAKPLAGLRILDVGCGGGLLSEPLARLGATVTGIDPTPGSIEVARAHAERD 141

Query: 206 PET-STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVIST 264
           PE   +I Y     E+LV+   KFDAV+ASEV+EHV +  +F KS   LT   G+   +T
Sbjct: 142 PEVRDSIVYEGVEIEELVQRSVKFDAVVASEVVEHVQNYRDFVKSCVTLTEDGGSLFFTT 201

Query: 265 INRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEEL 302
           INR+++++  A IAAE+I   +P G H W+ FL PE+L
Sbjct: 202 INRTVQSFLIAKIAAEYIFRLVPPGLHDWNMFLPPEQL 239


>gi|393761930|ref|ZP_10350561.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alishewanella
           agri BL06]
 gi|392607143|gb|EIW90023.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alishewanella
           agri BL06]
          Length = 242

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 143/253 (56%), Gaps = 14/253 (5%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +N+       S++   E++KF+ IA  WWD EG +KPLH LNPTRL +I   L   F   
Sbjct: 1   MNSPDNFDKNSNVDQNEISKFNEIAARWWDPEGEFKPLHLLNPTRLGYISDQLGGLF--- 57

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                   G N +DVGCGGGIL+E +AR GA VTGID     + +ARLHA L+   + I+
Sbjct: 58  --------GRNTLDVGCGGGILAESMARAGAKVTGIDMAPDGLNVARLHA-LEAGVN-ID 107

Query: 213 YCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y  +TAE   E    +F+ V   E++EHV DPA   ++ + L       V STIN++ +A
Sbjct: 108 YQQSTAEDFAERHAGEFELVTCMEMLEHVPDPASVVRACAELAAPGATLVFSTINKTAKA 167

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y  AI+ AE++L  +P+GTHQ+  F+ P  L+  ++ A +++ +  G  +NPL   + L 
Sbjct: 168 YLFAIVGAEYLLKLVPRGTHQFDKFIRPSVLMRYIEDAGLELVDATGLHFNPLNNSFKLG 227

Query: 332 DDISVNFIAFGTK 344
             + VN+     K
Sbjct: 228 AGLDVNYFVVARK 240


>gi|381157398|ref|ZP_09866632.1| ubiquinone biosynthesis O-methyltransferase [Thiorhodovibrio sp.
           970]
 gi|380881261|gb|EIC23351.1| ubiquinone biosynthesis O-methyltransferase [Thiorhodovibrio sp.
           970]
          Length = 237

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/243 (40%), Positives = 144/243 (59%), Gaps = 18/243 (7%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
            A +++ HAE++KF  +A  WWD +  +K LH +NP RLAFI   +              
Sbjct: 3   QASANVDHAEISKFEQLAARWWDPDSEFKTLHDINPLRLAFIERKV------------EL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
           +G  ++DVGCGGGILSE +A  GA VTGID  E  ++IA LH     ET   ++Y  T+A
Sbjct: 51  QGKQVLDVGCGGGILSEAMAARGAKVTGIDMGEMPLRIAELHT---LETGVQVDYRQTSA 107

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E L EE    FD +   E++EHV +PA   ++ + L    G    ST+NR+ ++Y  A++
Sbjct: 108 EALAEETPASFDVITCMELLEHVPEPASVVRACARLVRPGGYLFFSTLNRNPKSYLFAVL 167

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDISV 336
            AE++L+ LPKGTH ++ FL P EL    + A + + E++G  YNPLT  + L S DISV
Sbjct: 168 GAEYLLNMLPKGTHDYTRFLRPSELARFARAADLQIDEISGMTYNPLTQVYHLDSKDISV 227

Query: 337 NFI 339
           N++
Sbjct: 228 NYL 230


>gi|445495470|ref|ZP_21462514.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Janthinobacterium
           sp. HH01]
 gi|444791631|gb|ELX13178.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Janthinobacterium
           sp. HH01]
          Length = 231

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 135/232 (58%), Gaps = 13/232 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD    ++PLH +NP RL +I +              P  G  ++D+G
Sbjct: 7   ELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINAR------------APLAGKKVIDIG 54

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR GA+VTGID  EK +K+A LH+ L+   +         E   +E  ++
Sbjct: 55  CGGGILSESMARKGASVTGIDLSEKALKVADLHS-LESGVAVRYKLIAAEEMAAQEAGQY 113

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   E++EHV DP    ++ + L    G    ST+NR+ +AY  AI+ AE++L  LPK
Sbjct: 114 DVVTCMEMLEHVPDPGAIVRAAATLVKPGGHVFFSTLNRNPKAYLFAILGAEYLLRMLPK 173

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           GTH +  F+TP EL   ++ A +DV+   G  YNPLT  +SL+DD SVN++ 
Sbjct: 174 GTHDYDKFITPSELSQFIRSAGLDVQGFKGMGYNPLTKIYSLNDDTSVNYLV 225


>gi|421497871|ref|ZP_15945019.1| ubiG [Aeromonas media WS]
 gi|407183194|gb|EKE57103.1| ubiG [Aeromonas media WS]
          Length = 254

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 150/250 (60%), Gaps = 15/250 (6%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
            +++K ++ +++   E+AKF AIA  WWD EG +KPLH +NP RL +I       F    
Sbjct: 12  QDHRKMNSDANVDLTEIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF---- 67

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
                  G  ++D+GCGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   +EY
Sbjct: 68  -------GKRVLDIGCGGGILSESMARRGARVTGIDMGKEPLGVARLHA-LE-QGVELEY 118

Query: 214 CCTTAE-KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              TAE    E   ++D V   E++EHV DPA   ++++ L    G   +STINR+ +AY
Sbjct: 119 RQMTAEAHAAEAPGQYDVVTCMEMLEHVPDPASVLRAIATLVRPGGKVFVSTINRNPKAY 178

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
              I+ AE++L  +PKGTH    F+TP EL  + + A + V++M+G  Y PL+  + L  
Sbjct: 179 LMMILGAEYLLKMVPKGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLSNSFKLGK 238

Query: 333 DISVNF-IAF 341
           ++ VN+ +AF
Sbjct: 239 NVDVNYMVAF 248


>gi|378949564|ref|YP_005207052.1| protein UbiG [Pseudomonas fluorescens F113]
 gi|359759578|gb|AEV61657.1| UbiG [Pseudomonas fluorescens F113]
          Length = 232

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEGLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRAAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|313230756|emb|CBY08154.1| unnamed protein product [Oikopleura dioica]
          Length = 269

 Score =  184 bits (466), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 137/244 (56%), Gaps = 6/244 (2%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS--A 156
           + A  +L H E+ KF A+   WWD  G   PLH+LN  R+ ++R  L   F+ +P S   
Sbjct: 20  NRAAGTLNHKEVEKFGAMNGDWWDQNGQNSPLHSLNKLRVGYVRDLL---FKTNPNSPAG 76

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
            P     I+DVGCGGGIL+E LA++GA VT +DA E  I +A     +      + Y   
Sbjct: 77  LPLFSKTILDVGCGGGILAEGLAQLGADVTAVDACEDLISVAE-KRRIRKGIENLTYLDV 135

Query: 217 TAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAI 276
             E L E   +FD VI+SEV+EHV +P  F    S L   +G  + +TINR++++   AI
Sbjct: 136 LVEDLQEIDTRFDLVISSEVLEHVEEPWAFVAYCSNLVKQDGDLIFTTINRTIQSRILAI 195

Query: 277 IAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISV 336
             AE I   LP+GTH W  F+T EEL++ L+     V+++ G  +NP T  WS S+ + V
Sbjct: 196 ELAERIAGLLPRGTHDWEKFVTVEELIMDLREVKFRVEDIKGMSWNPFTNEWSWSNSLDV 255

Query: 337 NFIA 340
           N++ 
Sbjct: 256 NYLV 259


>gi|330994796|ref|ZP_08318718.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758057|gb|EGG74579.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter sp.
           SXCC-1]
          Length = 249

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 140/250 (56%), Gaps = 11/250 (4%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           N++    +  S+   E+A FS++A  WWD  GP +PLHA+N  R  +    L      D 
Sbjct: 3   NHDSPVVSADSVAPEEIAHFSSLAARWWDPAGPMRPLHAMNDLRTGWSLRHLPAPVAADG 62

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETST 210
              R      ++D+GCG G+ SE  AR G  VTG+DA +  I   RLH    P       
Sbjct: 63  TRRR------LLDMGCGAGLASEAFARAGYDVTGLDAAQAAITAGRLHLRQHPLPASAGP 116

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           + Y C +AE LV E  +FDA+ A EVIEHV DPA F + L++L    GA V+ST+NR+ R
Sbjct: 117 LAYRCASAEALVAEGGRFDAISALEVIEHVTDPAAFLRMLASLLRPGGAMVVSTMNRTWR 176

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           + A A I AE++L  LP GTH W  F+TP EL     +A + + ++AG V  P  G W  
Sbjct: 177 SMAMAKIGAEYVLRLLPVGTHDWRKFITPAELGQYAAQAGLRITDIAGMV--PTLGGWRE 234

Query: 331 SDDISVNFIA 340
           S D++VN++A
Sbjct: 235 SRDLAVNYLA 244


>gi|319786814|ref|YP_004146289.1| ubiquinone biosynthesis O-methyltransferase [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465326|gb|ADV27058.1| ubiquinone biosynthesis O-methyltransferase [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 240

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 142/239 (59%), Gaps = 15/239 (6%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF+A+A+ WWD +GP + LH LNP RL ++ + +            P  G  ++D
Sbjct: 15  QAELDKFAALANRWWDPDGPQRALHVLNPVRLDYVATRV------------PLAGSAVLD 62

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCG G+LSE LAR GA VT  D   + +K+ARLH+ L+     +EY   + E L EE+ 
Sbjct: 63  VGCGAGLLSEALARGGARVTAADLAPELVKVARLHS-LESGVQ-VEYLVQSVESLAEERP 120

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FDA+   E++EHV DP     + + L    G   +ST+NR+  A+A AI+ AE++   
Sbjct: 121 GSFDAITCMEMLEHVPDPGSIIAACAKLLRPGGRLFLSTLNRTPAAFALAIVGAEYVARL 180

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           LPKGTH+++ F+ P E+   L+ A + +++++G  Y+PL  R SLS   SVN++A   K
Sbjct: 181 LPKGTHRYADFIKPSEMAAWLRDAGLQLEDVSGLFYDPLRNRASLSRQTSVNYLACAVK 239


>gi|354595374|ref|ZP_09013407.1| 3-demethylubiquinone-9 3-methyltransferase [Commensalibacter
           intestini A911]
 gi|353671284|gb|EHD12990.1| 3-demethylubiquinone-9 3-methyltransferase [Commensalibacter
           intestini A911]
          Length = 250

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 144/246 (58%), Gaps = 12/246 (4%)

Query: 98  KHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR 157
           +H+  +S+K  E+ +F+AIAD WW+  GP  PLH +N  R+ +I+  L  H   D   + 
Sbjct: 9   QHNQKNSVKEDEINRFNAIADEWWNRTGPMSPLHEMNSLRIEWIQKILKTHTSFD--HSH 66

Query: 158 PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYC 214
           P     I+D+GCG GI SE LA +G  V G+DA +  I+ A+ H D   L P +  I Y 
Sbjct: 67  P-----ILDIGCGVGIASEGLATLGYNVLGVDAAKDVIQAAQNHLDTIPLPPNSGDITYR 121

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
             T E+LV E+++F  V A E++EHV DP EF ++++ L    G T +STINR++ ++  
Sbjct: 122 VGTIEELVSEKKQFQIVNALELLEHVNDPQEFIQNIATLLTDNGITFVSTINRNIPSFLF 181

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A + AE++   LP GTHQW  F+TP EL  +   A + V ++AG    P    W ++ D+
Sbjct: 182 AKVGAEYLTRKLPVGTHQWKQFITPAELCKMAHNAGLRVVDIAGLTMRP--NGWKITQDV 239

Query: 335 SVNFIA 340
            +N++ 
Sbjct: 240 KINYMV 245


>gi|383189256|ref|YP_005199384.1| ubiquinone biosynthesis O-methyltransferase [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
 gi|371587514|gb|AEX51244.1| ubiquinone biosynthesis O-methyltransferase [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
          Length = 240

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 140/241 (58%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I              A   
Sbjct: 7   STPQNIDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLNYILE-----------RADGL 55

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G N++DVGCGGGILSE +A  GATVTG+D   + +++ARLHA L+     ++Y   T E
Sbjct: 56  FGKNVLDVGCGGGILSESMAVAGATVTGLDMGGEPLQVARLHA-LESGVK-VDYVQETVE 113

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
              E   +++D V   E++EHV DPA    + + L    G    STINR+ +A+  AI  
Sbjct: 114 AHAEAHPQQYDVVTCMEMLEHVPDPASVVAACARLVKPGGHVFFSTINRNNKAWLMAIFG 173

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  +PKGTH    F+ P EL+ ++ R S+  + + G  YNPL+  + L  ++ VN+
Sbjct: 174 AEYVLKMVPKGTHDIKKFIKPSELLGMIDRTSLSERHIIGLHYNPLSDHFKLGPNVDVNY 233

Query: 339 I 339
           +
Sbjct: 234 M 234


>gi|407939414|ref|YP_006855055.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acidovorax sp.
           KKS102]
 gi|407897208|gb|AFU46417.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acidovorax sp.
           KKS102]
          Length = 236

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AELAKFS +A  WWD +  ++PLH +NP RL +I            +      G  ++DV
Sbjct: 10  AELAKFSELAHRWWDPDSEFRPLHQINPLRLDWI------------HGLSALTGKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL++ +AR GA V GID   K +++A+LHA L+  T  ++Y   +AE +  EQ  
Sbjct: 58  GCGGGILADSMARKGADVLGIDLATKALRVAQLHA-LEAGTQNVQYREISAEAMAAEQPA 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L    G    STINR+ +A+  AI+ AE++L+ L
Sbjct: 117 GFDVVTCMEMLEHVPDPASVVRACATLVKPGGWVFFSTINRNAKAFMLAIVGAEYVLNML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           P+GTH+++  + P EL    + A +DV    G  YNPLT R+ LS + SVN++ F T+
Sbjct: 177 PRGTHEYAKMIRPSELAGHCRSAGLDVLHTKGLEYNPLTRRYWLSANTSVNYL-FATR 233


>gi|407365601|ref|ZP_11112133.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           mandelii JR-1]
          Length = 232

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AII AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFKMVKPGGQVFFSTINRNPKAYLFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|424793861|ref|ZP_18219917.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           translucens pv. graminis ART-Xtg29]
 gi|422796338|gb|EKU24863.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xanthomonas
           translucens pv. graminis ART-Xtg29]
          Length = 245

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 139/239 (58%), Gaps = 15/239 (6%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF A+A  WWDA+GP KPLHALNP RL ++   L            P  G +++D
Sbjct: 14  QAELDKFGALATRWWDADGPQKPLHALNPVRLRYVAERL------------PLRGASVLD 61

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGG+LSE LA+ GA VT ID   + +K+ARLH  L+     ++Y   + E L  E+ 
Sbjct: 62  VGCGGGLLSEALAKEGAQVTAIDLAPELVKVARLH-QLESGVE-VDYRVQSVEDLAAERP 119

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FDA+   E++EHV DPA   ++ + L    G   +ST+NR+  A+A AI+ AE++   
Sbjct: 120 GSFDAITCMEMLEHVPDPAAIVRACATLLKPGGQLFLSTLNRTPAAFALAIVGAEYVARL 179

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           LP GTH++  F+ P EL   L++A + + +++G  Y P   R  LS    VN++A   K
Sbjct: 180 LPTGTHRYQDFIKPAELAAWLRQAELQLHDVSGMRYEPWRNRARLSTRTEVNYLACALK 238


>gi|410092254|ref|ZP_11288786.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           viridiflava UASWS0038]
 gi|409760419|gb|EKN45567.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           viridiflava UASWS0038]
          Length = 232

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAIALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILGLLPRGTHDFKKFIRPSELGAWSREAGLQVKDITGLTYNPLTKHYKLASDVDVNYM 225


>gi|357974306|ref|ZP_09138277.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sphingomonas
           sp. KC8]
          Length = 248

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 140/240 (58%), Gaps = 6/240 (2%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SAP ++   E A F A+A  WW+ +G    LH LNP RL +IR  +  H+  D    +P 
Sbjct: 4   SAPDTIDPVETAHFGAMAADWWNPKGSSAMLHRLNPVRLRYIRDAVDAHWHGDGVGFKPL 63

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G   +DVGCG G+L+EPLAR+GA+VT IDA  +NI +AR HA    +  +I+Y     E
Sbjct: 64  AGRRALDVGCGAGLLAEPLARLGASVTAIDAAAENIAVARAHA--QGQGLSIDYRYGAIE 121

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
            L +E   FD VI+ EVIEHVADP  F   L       G  V+ST NR+  +    I   
Sbjct: 122 SLGDE--TFDVVISLEVIEHVADPTAFVAGLVRALAPGGLLVLSTPNRTPLSRLALITIG 179

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E  L  +PKGTH W  FLTPEEL  +++ A + V ++ G  + P+ G + LSD+++++++
Sbjct: 180 ES-LGGIPKGTHDWHKFLTPEELTALIETAGLRVTDVTGLSFTPIQG-FHLSDNVAMDYL 237


>gi|253996274|ref|YP_003048338.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera mobilis
           JLW8]
 gi|253982953|gb|ACT47811.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera mobilis
           JLW8]
          Length = 244

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 15/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KF  +A  WWD    +KPLH +NP RL +I +                 G  ++DVG
Sbjct: 17  ELQKFGELAHKWWDKNSEFKPLHEINPLRLNYIDNL------------ASLSGKRVLDVG 64

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +   GA VTGID  E+ + +A+LH  L+   + + Y   + E+L  EQ   
Sbjct: 65  CGGGILSESMYFKGADVTGIDLGEQALNVAKLH-QLE-SGAKVNYELISVEQLALEQPAS 122

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + + L    G+   STINR+ +AY  A++ AE+IL+ LP
Sbjct: 123 FDVVTCMEMLEHVPDPASIVAACARLVKPGGSVFFSTINRNPKAYLFAVLGAEYILNMLP 182

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           KGTH ++ F+ P EL   ++++ ++V  MAG  Y PLT  +SLSDD+SVN++
Sbjct: 183 KGTHDYAKFIKPSELSGWVRQSGLNVAGMAGMSYQPLTQHYSLSDDVSVNYL 234


>gi|422674622|ref|ZP_16733974.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. aceris str. M302273]
 gi|330972348|gb|EGH72414.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. aceris str. M302273]
          Length = 232

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   ++D V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSREAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225


>gi|424779642|ref|ZP_18206555.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alcaligenes sp.
           HPC1271]
 gi|422885603|gb|EKU28050.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alcaligenes sp.
           HPC1271]
          Length = 240

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 142/234 (60%), Gaps = 16/234 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KFSA+A  WWD +  +KPLHA+NP RL +I S          Y+     G  ++DV
Sbjct: 14  AEIDKFSALASRWWDPDSEFKPLHAINPLRLDWILS----------YTGS-LAGKQVLDV 62

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGILSE LA+ GA VTGID  E+++KIARLH+    E+   ++Y   +AE + ++  
Sbjct: 63  GCGGGILSESLAQSGADVTGIDLAERSLKIARLHS---LESGVPVKYEMISAEDMADQHP 119

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            +FD V   E++EHV DP     + + L    G    ST+NR+ +++  AI+ AE++L  
Sbjct: 120 GRFDVVTCMEMLEHVPDPGSIIAACAKLVKPGGWVFFSTLNRNPKSFLFAIVGAEYLLRL 179

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +PKGTH +  F+ P EL+   +R+ +D   + G  YNP+T  + LS D SVN++
Sbjct: 180 IPKGTHSYEGFIKPSELISSARRSGLDALALKGLEYNPITEHYRLSGDTSVNYL 233


>gi|398952127|ref|ZP_10674589.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM33]
 gi|426408267|ref|YP_007028366.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas sp. UW4]
 gi|398155624|gb|EJM44063.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM33]
 gi|426266484|gb|AFY18561.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudomonas sp. UW4]
          Length = 232

 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|330445623|ref|ZP_08309275.1| 3-demethylubiquinone-9 3-O-methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489814|dbj|GAA03772.1| 3-demethylubiquinone-9 3-O-methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 236

 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 147/248 (59%), Gaps = 16/248 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P ++  AE++KF  +A  WWD EG +KPLH +NP RL ++              A   
Sbjct: 2   SKPLNVDPAEISKFEDMASRWWDLEGEFKPLHQINPLRLNYVID-----------HANGL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G  ++DVGCGGGIL+E +A  GA VTG+D  ++ + +ARLHA    ET T ++Y  +TA
Sbjct: 51  FGKKVLDVGCGGGILAESMAIEGAEVTGLDMGKEPLTVARLHA---LETGTKLDYIQSTA 107

Query: 219 EKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E+  E+ Q  +D +   E++EHV DPA    + + +    G    ST+NR++++Y  AI+
Sbjct: 108 EEHAEKHQAYYDVITCMEMLEHVPDPASIIAACAKMVKPGGHVFFSTLNRNIKSYLFAIV 167

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AEH++  +PKGTH  + F+ P EL+ ++ + +++ + + G  YNPLT  +SL  ++ VN
Sbjct: 168 GAEHVMRLVPKGTHDHNKFIRPSELMAMIDKTALEDRHIIGLHYNPLTNSYSLGTNVDVN 227

Query: 338 FIAFGTKN 345
           +I    K 
Sbjct: 228 YIVHTQKQ 235


>gi|269215086|ref|ZP_05987708.2| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria lactamica
           ATCC 23970]
 gi|269208356|gb|EEZ74811.1| 3-demethylubiquinone-9 3-O-methyltransferase [Neisseria lactamica
           ATCC 23970]
          Length = 242

 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECIRVEDLA 117

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FDAV   E++EHV DPA    + + L   +G    STIN++ ++Y   I+AAE+
Sbjct: 118 GAEPHSFDAVTCMEMMEHVPDPAAIVCACAKLVKPDGMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F+ P +L  + ++A +DV E  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFIAPADLARMCRQAGLDVVETKGMTYHVLSQTYALCDSTDVNYM 235


>gi|383859204|ref|XP_003705086.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Megachile rotundata]
          Length = 285

 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 140/238 (58%), Gaps = 2/238 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  A +   S +++ WWD +G  + LHALNP R+ F+R  L            P EG+
Sbjct: 39  STVDLATVDLHSKLSNKWWDIKGEMRALHALNPLRVQFVRDGLANTGINIESPHLPLEGI 98

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            I+DVGCGGG+LSEPLAR+GA VTGIDA  + I +A+ HA LD   S  + Y  T  E  
Sbjct: 99  KILDVGCGGGLLSEPLARIGAEVTGIDASSELITVAKEHAALDSNISGRLNYIQTVIEDF 158

Query: 222 VEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
                K ++AVIASEV+EHV +   F K   +    +G+  ++T+N+++ ++   IIAAE
Sbjct: 159 APTNSKVYNAVIASEVVEHVNEKELFLKCCVSTLKPDGSIFLTTLNKTLPSWLGGIIAAE 218

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           ++L  +PKGTH W+ F++P E+  +L+      K + G  YNPL   WS     ++N+
Sbjct: 219 YVLKLVPKGTHDWNKFISPAEMQRLLETYGCKTKLIHGMFYNPLKNEWSWVASRAINY 276


>gi|379713588|ref|YP_005301926.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           massiliae str. AZT80]
 gi|376334234|gb|AFB31466.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           massiliae str. AZT80]
          Length = 289

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/285 (37%), Positives = 146/285 (51%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NPTRL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPTRLEYIIEKITMHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYS--------ARPFEG-------LNIVDVGCGGGILSEPLAR 180
                         R+D  S        A  FE        L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLAVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTEIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|431927137|ref|YP_007240171.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           RCH2]
 gi|431825424|gb|AGA86541.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas stutzeri
           RCH2]
          Length = 232

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 137/239 (57%), Gaps = 15/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKL 221
            ++D+GCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   T     
Sbjct: 50  KVIDIGCGGGILSEAMAQRGAEVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEAMA 107

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++  AL    G    STINR+ +AYA AII AE+
Sbjct: 108 EEAPEQFDIVTCLEMLEHVPDPASVIRACCALVKPGGQVFFSTINRNPKAYALAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + LS D+ VN++ 
Sbjct: 168 VLQLLPRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTKHYKLSADVDVNYMV 226


>gi|332852846|ref|ZP_08434428.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6013150]
 gi|332866693|ref|ZP_08437155.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6013113]
 gi|421626030|ref|ZP_16066860.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC098]
 gi|445471443|ref|ZP_21452140.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC338]
 gi|332728960|gb|EGJ60311.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6013150]
 gi|332734462|gb|EGJ65577.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii 6013113]
 gi|408696104|gb|EKL41656.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC098]
 gi|444771425|gb|ELW95555.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           baumannii OIFC338]
          Length = 237

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 134/239 (56%), Gaps = 13/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A       ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDE-----------RAGGLASKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L +EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEELAQEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T R+ L+ ++ VN++    K  
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTVKTG 236


>gi|332284747|ref|YP_004416658.1| DHHB methyltransferase [Pusillimonas sp. T7-7]
 gi|330428700|gb|AEC20034.1| DHHB methyltransfera [Pusillimonas sp. T7-7]
          Length = 244

 Score =  183 bits (465), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 148/246 (60%), Gaps = 16/246 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N   HS   ++  AE+ KF+A+A  WWD E  +KPLHA+NP RL +I             
Sbjct: 7   NESNHS--QNVDQAEIDKFAALASRWWDPESEFKPLHAINPLRLGWIID----------- 53

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
            A    G  ++DVGCGGGIL+E +A+ GA VTGID  ++++ +A+LH  L+   S ++Y 
Sbjct: 54  HAGSLAGKTVLDVGCGGGILAESMAKAGAQVTGIDLAQQSLTVAKLHG-LESGVS-VDYQ 111

Query: 215 CTTAEKLVEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             +AE +  +   +FD V   E++EHV DP    ++ ++L    G    ST+NR+ +++ 
Sbjct: 112 KISAEDMAAQLPAQFDVVTCMEMLEHVPDPGSIVQACASLVKPGGWVFFSTLNRNPKSFL 171

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE++L  LPKGTH + +F+ P EL    +RA + V ++AG  YNP+T  + LS+D
Sbjct: 172 FAIVGAEYVLRMLPKGTHSYENFIKPSELAAAARRAGLTVTQLAGMEYNPITDHYKLSND 231

Query: 334 ISVNFI 339
            SVN++
Sbjct: 232 TSVNYL 237


>gi|451936526|ref|YP_007460380.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
 gi|451777449|gb|AGF48424.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
          Length = 234

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 95/241 (39%), Positives = 146/241 (60%), Gaps = 15/241 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           ++  H+E+ KF+ I++ WWD  G  K LH +N  RL +I S+ C + +            
Sbjct: 4   ANFYHSEIEKFNKISEEWWDKSGSMKSLHKINTLRLDWILSS-CLNIKNK---------- 52

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL- 221
           +I+D+GCGGGILSE LA +GA VTGID  +  I+IA  H+        I Y   +AE L 
Sbjct: 53  SILDLGCGGGILSESLAALGANVTGIDLADDLIEIANFHSS--RNLLDITYRNISAEDLS 110

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           + EQ+K+D V+  E++EHV DP    KS S L    G    STINR+++++  +I+ AE+
Sbjct: 111 ISEQKKYDIVVCMEMLEHVPDPVSIIKSCSNLVKDGGTVFFSTINRNLKSFLFSIVGAEY 170

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIA 340
           IL  LP GTH +  F+ P EL+   ++ ++++ E+ G  YNP+ G + LS+++SVN F++
Sbjct: 171 ILKLLPIGTHSYKLFIKPCELIKYSRKFNLELMELIGLSYNPINGEFFLSNNVSVNYFMS 230

Query: 341 F 341
           F
Sbjct: 231 F 231


>gi|381198381|ref|ZP_09905719.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           lwoffii WJ10621]
          Length = 238

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/237 (40%), Positives = 135/237 (56%), Gaps = 13/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A A  WWD    ++PLH +NP RL +I              A    G  ++DVG
Sbjct: 10  EIAKFEAFAAIWWDQHSEFRPLHMINPLRLNWIDE-----------HAGGLSGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + +ARLHA+ +     IEY     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGANVLGIDMGEAPLNVARLHAEQE-GVKHIEYRQIPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV +PA    +   L    G    STINR+ +AY  AII AE++L  L 
Sbjct: 118 YDIVTCMEMLEHVPNPASIIAACHKLVKPGGHVFFSTINRNPKAYLFAIIGAEYVLRMLA 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH +  F+ P EL   ++ A + +K+M G  YNPLT R+ L+ ++ VN++ +  K
Sbjct: 178 KGTHDYQKFIKPSELAHDIRGAGLKLKDMTGLHYNPLTKRYWLAPNVDVNYMVYTVK 234


>gi|239948257|ref|ZP_04700010.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922533|gb|EER22557.1| 3-demethylubiquinone-9 3-O-methyltransferase [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 290

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 145/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYSAR----PFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L +  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENDVKINYLQSTIEEL-QSDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE++L W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYVLGIIVAEYVLGWVPKNTHDYSKFLKPS 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  IL    +++KE+ G VY+P+   W LSDDI VN F+  G K
Sbjct: 239 EIYEILTDTDVEIKELKGLVYDPIKNEWKLSDDIDVNYFMCLGRK 283


>gi|146343398|ref|YP_001208446.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase [Bradyrhizobium sp. ORS 278]
 gi|146196204|emb|CAL80231.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Bradyrhizobium
           sp. ORS 278]
          Length = 260

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 141/240 (58%), Gaps = 4/240 (1%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
            PS++  AE+A+FS +A+ WW  +G +K +HA N  R+ ++   L     +D  +  P  
Sbjct: 17  GPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDRLPALVGRDAGANLPLA 76

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
           GL+I+DVGCG GI++EPL+R+GA   GIDA E+N+ +A  HA    + + + Y     E 
Sbjct: 77  GLDIIDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARR--QGALVSYRHALPED 134

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L  E  + D V+  EV+EHVAD A F   ++ L    G  VI T+NR+  ++  AII AE
Sbjct: 135 LAAEGEQADIVLTLEVVEHVADLARFVGHVADLVRPGGLLVIGTLNRTPISFVKAIIGAE 194

Query: 281 HILHWLPKGTHQWSSFLTPEEL-VLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +IL WLP+GTH W  F+ P EL  L+  R  I V+ +A    NPLT RW +    S N++
Sbjct: 195 YILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVA-VELNPLTMRWRIGGRPSTNYL 253


>gi|209695247|ref|YP_002263176.1| 3-demethylubiquinone-9 3-methyltransferase [Aliivibrio salmonicida
           LFI1238]
 gi|208009199|emb|CAQ79453.1| 3-demethylubiquinone-9 3-methyltransferase [Aliivibrio salmonicida
           LFI1238]
          Length = 241

 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 141/238 (59%), Gaps = 16/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RL ++ +           +A    G  ++DV
Sbjct: 17  AEIKKFEDMASRWWDFEGEFKPLHQINPLRLNYVLT-----------NANGLFGKKVLDV 65

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI-EYCCTTAEKLVEEQ- 225
           GCGGGIL+E +A+ GA V G+D  ++ + +ARLHA    ET TI EY  +TAE+  EE  
Sbjct: 66  GCGGGILAESMAKQGADVIGLDMGKEPLTVARLHA---LETGTILEYIQSTAEQHAEEYP 122

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D +   E++EHV DP    ++ + +    G    ST+NR++++Y  AI+ AEH+L  
Sbjct: 123 ETYDVITCMEMLEHVPDPLSVIRACAKMIKPGGHVFFSTLNRNIKSYLFAIVGAEHVLKL 182

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           +PKGTH    F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct: 183 VPKGTHDHDKFIRPSELLKMLDQTALQERGITGLHYNPLTDAYSLGTNVDVNYIVHTT 240


>gi|350411725|ref|XP_003489434.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Bombus impatiens]
          Length = 335

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  A +   S ++  WWD  G    LH+LNP R+ F+R  L     K      P EG+
Sbjct: 87  STIDSATVEFHSKMSSRWWDTNGEMHALHSLNPLRVQFVRDGLANTGFKIKCPYLPLEGI 146

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKL 221
            I+DVGCGGG+ SE LAR GA VTGID   + I +A+ HA LDP     + Y  TT E  
Sbjct: 147 KILDVGCGGGLYSESLARTGANVTGIDVSSELITVAKGHAALDPSLDGKLNYVQTTIEDF 206

Query: 222 -VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +  +  FDAV+ASEVIEHV +   F K   +   S G+  ++T N+++ ++   II AE
Sbjct: 207 ALINKGVFDAVVASEVIEHVNNKELFLKCCVSALKSGGSIFLTTFNKTLSSWLGGIITAE 266

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           HIL  +PKGTH W+ F+TP E+  IL+      K + G  YNPL   WS     ++N+
Sbjct: 267 HILKLIPKGTHDWNKFVTPAEMQSILETCGSKTKLIHGLFYNPLKREWSWRASTAINY 324


>gi|372488584|ref|YP_005028149.1| ubiquinone biosynthesis O-methyltransferase [Dechlorosoma suillum
           PS]
 gi|359355137|gb|AEV26308.1| ubiquinone biosynthesis O-methyltransferase [Dechlorosoma suillum
           PS]
          Length = 232

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 138/239 (57%), Gaps = 15/239 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD +  +KPLH +NP RL +I + +               G  ++DVG
Sbjct: 8   ELQKFSDLAHRWWDPKSEFKPLHDINPLRLDWIDANVG------------LAGKKVLDVG 55

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGG+LSE +A  GA VTGID  EK + +ARLH  L     +++Y   +AE L  E    
Sbjct: 56  CGGGLLSEGMAERGAQVTGIDLSEKALGVARLH--LLESGRSVDYRHISAESLAAEMPGS 113

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + + L    G   +ST+NR+ ++Y  A+I AE++L  LP
Sbjct: 114 FDVVTCLEMLEHVPDPASTVAACARLVKPGGQVFLSTLNRNPKSYLLAVIGAEYLLQMLP 173

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           KGTH ++ F+ P EL    + A ++V E+ G  YNP T R+SL  D SVN++    +N+
Sbjct: 174 KGTHDYAKFIKPSELARHCKAADLEVAEIIGMTYNPFTQRYSLGRDTSVNYLLRTVRNA 232


>gi|322832013|ref|YP_004212040.1| ubiquinone biosynthesis O-methyltransferase [Rahnella sp. Y9602]
 gi|321167214|gb|ADW72913.1| ubiquinone biosynthesis O-methyltransferase [Rahnella sp. Y9602]
          Length = 240

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/241 (39%), Positives = 140/241 (58%), Gaps = 14/241 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           + P ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I              A   
Sbjct: 7   ATPQNIDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLNYILE-----------RADGL 55

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G N++DVGCGGGILSE +A  GATVTG+D   + +++ARLHA L+     +EY   T E
Sbjct: 56  FGKNVLDVGCGGGILSESMAVAGATVTGLDMGGEPLQVARLHA-LESGVK-VEYVQETVE 113

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
              +   +++D V   E++EHV DPA    + + L    G    STINR+ +A+  AI  
Sbjct: 114 AHADAHPQQYDVVTCMEMLEHVPDPASVVAACARLVKPGGHVFFSTINRNNKAWLMAIFG 173

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  +PKGTH    F+ P EL+ ++ R S+  + + G  YNPLT  + L  ++ VN+
Sbjct: 174 AEYVLKMVPKGTHDIKKFIKPSELLGMIDRTSLFERHIMGLHYNPLTDHFKLGPNVDVNY 233

Query: 339 I 339
           +
Sbjct: 234 M 234


>gi|426400631|ref|YP_007019603.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Endolissoclinum patella L2]
 gi|425857299|gb|AFX98335.1| 3-demethylubiquinone-9 3-O-methyltransferase [Candidatus
           Endolissoclinum patella L2]
          Length = 268

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 138/232 (59%), Gaps = 3/232 (1%)

Query: 113 FSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGG 172
           F+ IA+ WWD E  Y  LH L P R+  I+  L     K+  + +   GL ++DVGCGGG
Sbjct: 38  FAEIAEYWWDPEKHYWLLHCLVPVRMQLIKDFLAP-LGKNTSTLQALAGLKVLDVGCGGG 96

Query: 173 ILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVI 232
           +LSEP+AR+GA V GIDA    I IA  HA        I+Y     E LV++   FDA+I
Sbjct: 97  LLSEPMARLGAKVIGIDADSAGIAIAIDHAL--KMGLNIDYRIAAPEDLVDKDDNFDAII 154

Query: 233 ASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQ 292
           ASEVIEHV + + F  +L++L    G  +I+TINR+  +Y  AI+ AE+IL W+  GTH+
Sbjct: 155 ASEVIEHVNEKSLFLNALASLLQPGGILIITTINRTFCSYIKAIVGAEYILRWVSLGTHR 214

Query: 293 WSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           W++FLTP EL  +L++ + +V    GF +      ++LS ++ +N+     K
Sbjct: 215 WNNFLTPSELTEMLKKINFNVHPAFGFTFKLNENTFALSTNVRINYAVIAQK 266


>gi|330502865|ref|YP_004379734.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas mendocina
           NK-01]
 gi|328917151|gb|AEB57982.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas mendocina
           NK-01]
          Length = 232

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+     ++Y   TAE L 
Sbjct: 50  RVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLSVAQLH-QLESGVE-VDYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   L    G    STINR+ +AY  A+I AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACHKLVKPGGQVFFSTINRNPKAYLFAVIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L  D+ VN++
Sbjct: 168 ILRLLPRGTHDFKKFIRPSELGAWSRAAGLEVKDIIGLTYNPLTKHYKLEADVDVNYM 225


>gi|344344507|ref|ZP_08775369.1| 3-demethylubiquinone-9 3-methyltransferase [Marichromatium
           purpuratum 984]
 gi|343803914|gb|EGV21818.1| 3-demethylubiquinone-9 3-methyltransferase [Marichromatium
           purpuratum 984]
          Length = 248

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 138/241 (57%), Gaps = 3/241 (1%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           H    S+   E+A +  +A  WWDAEGP+ PLH LN  R+ ++R  L   F +D    RP
Sbjct: 5   HLTAPSVDPEEVAYYERLAHRWWDAEGPFWPLHRLNAFRVGYLRERLAAVFGRDARDTRP 64

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
           F GL ++D+GCGGGILSE +  +GA VTGID  EK +++AR+HA+       ++Y   +A
Sbjct: 65  FAGLRVLDIGCGGGILSESMVALGAEVTGIDITEKTLRVARMHAEAG--GLAVDYRLASA 122

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            ++ E    FD V+  EV+EHV    +F    + L    G  ++STINR+  A+  AII 
Sbjct: 123 AEMREAGATFDVVLNMEVLEHVEHLPDFLADSAELVRPGGVMLVSTINRTPIAWLMAIIG 182

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L WLP+GTH++   + P+E+   L     D+    G   NP    +S +  + VN+
Sbjct: 183 AEYVLRWLPRGTHRYRKLVRPDEVRGGLGE-GFDLLHRTGVRVNPFNRAFSFTGWMGVNY 241

Query: 339 I 339
           +
Sbjct: 242 M 242


>gi|237808192|ref|YP_002892632.1| ubiquinone biosynthesis O-methyltransferase [Tolumonas auensis DSM
           9187]
 gi|237500453|gb|ACQ93046.1| ubiquinone biosynthesis O-methyltransferase [Tolumonas auensis DSM
           9187]
          Length = 232

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 139/237 (58%), Gaps = 14/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD  G +KPLH +NP RL +I S  C              G  ++DVG
Sbjct: 7   EIAKFEAIASNWWDPHGDFKPLHLMNPLRLEWI-SDHCEGLF----------GKQVLDVG 55

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +A+ GA V GID   + +++ARLHA    +   ++Y   T E+L E++   
Sbjct: 56  CGGGILSESMAKQGAQVLGIDMGHEPLQVARLHAL--EQNVKLDYQRITVEELAEQRPAS 113

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STINR+ +++   I+AAE +L  +P
Sbjct: 114 FDVVTCMEMLEHVPDPASIVRACAKLAKPGGKLFFSTINRTKQSWLLMILAAEQVLKIVP 173

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH  + F+ P EL+     A +  +++AG  YNPLT  + LSDD+SVN+  F  K
Sbjct: 174 KGTHDHAKFIRPAELIRCCDSADLLTRKVAGVRYNPLTEHFKLSDDVSVNYQIFCEK 230


>gi|71279347|ref|YP_269050.1| 3-demethylubiquinone-9 3-methyltransferase [Colwellia
           psychrerythraea 34H]
 gi|109895669|sp|Q482G8.1|UBIG_COLP3 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|71145087|gb|AAZ25560.1| 3-demethylubiquinone-9 3-methyltransferase [Colwellia
           psychrerythraea 34H]
          Length = 246

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 136/240 (56%), Gaps = 2/240 (0%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           S P ++   E+AKF  +A  WWD  G +KPLH +NP R+ FI   +         S   F
Sbjct: 3   SQPLNVNEDEIAKFEQVASQWWDLTGDFKPLHQINPLRVQFISQHIALQVEGID-SKNGF 61

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
             + I+DVGCGGGILSE LA++GA VTGID   + + +A+LHA L+   S      T  E
Sbjct: 62  YDMQIIDVGCGGGILSESLAKLGANVTGIDMGTEPLNVAKLHA-LETGVSINYQKITAEE 120

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           K +E    FD V   E++EHV DPA   ++ S L    G    ST+N+S+++Y  AI+AA
Sbjct: 121 KALENPGTFDVVTCMEMLEHVPDPASVIQACSTLVKPGGLIFFSTLNKSIKSYLLAILAA 180

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E +L  +P GTH    F+ P +L+   +   +   + +G  YNP+TG   L+D + VN+I
Sbjct: 181 EKLLKIVPDGTHDHDKFIRPSQLIGWAEEHGLKCIDASGIHYNPITGNHKLNDSLDVNYI 240


>gi|66046879|ref|YP_236720.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. syringae B728a]
 gi|71734933|ref|YP_275812.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|302187662|ref|ZP_07264335.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. syringae 642]
 gi|422641137|ref|ZP_16704561.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae Cit 7]
 gi|424068793|ref|ZP_17806242.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. avellanae str. ISPaVe013]
 gi|424073214|ref|ZP_17810632.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. avellanae str. ISPaVe037]
 gi|440722395|ref|ZP_20902776.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP34876]
 gi|440727487|ref|ZP_20907716.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP34881]
 gi|443642908|ref|ZP_21126758.1| Bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. syringae B64]
 gi|75501148|sp|Q4ZQ90.1|UBIG_PSEU2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|109895904|sp|Q48FM4.1|UBIG_PSE14 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|63257586|gb|AAY38682.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. syringae B728a]
 gi|71555486|gb|AAZ34697.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|330953525|gb|EGH53785.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae Cit 7]
 gi|407996414|gb|EKG36887.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. avellanae str. ISPaVe037]
 gi|407996527|gb|EKG36996.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. avellanae str. ISPaVe013]
 gi|440361247|gb|ELP98479.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP34876]
 gi|440363625|gb|ELQ00786.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP34881]
 gi|443282925|gb|ELS41930.1| Bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. syringae B64]
          Length = 232

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   ++D V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225


>gi|349686185|ref|ZP_08897327.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Gluconacetobacter oboediens 174Bp2]
          Length = 255

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 138/251 (54%), Gaps = 15/251 (5%)

Query: 97  KKHSAP----SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           + H +P     S+   E+A FS +A  WWD  GP +PLHA+N  R  +    L      D
Sbjct: 8   QHHDSPVLSADSVAPEEIAHFSDLAARWWDPVGPMRPLHAMNDLRTGWSLRHLPAPVADD 67

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ETS 209
                  E   ++D+GCG G+ SE  AR G  VTG+DA +  I   RLH    P      
Sbjct: 68  D------ERRTLLDIGCGAGLASEAFARAGFDVTGLDASQAAITAGRLHMRQHPLPASAG 121

Query: 210 TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
            + Y C +AE+LV E  +FDA+ A EVIEHV DPA F + L  +    GA V+ST+NR+ 
Sbjct: 122 PLSYRCGSAEELVAEGARFDAISALEVIEHVTDPAAFLRMLGGMLRPGGAMVVSTMNRTW 181

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           R+ A A I AE++L  LP GTH W  F+TP E+     RA + + ++AG V  P  G W 
Sbjct: 182 RSMAMAKIGAEYVLRLLPVGTHDWRKFITPAEMGQYAARAGLRITDIAGMV--PAPGGWR 239

Query: 330 LSDDISVNFIA 340
            S D++VN+IA
Sbjct: 240 ESRDMAVNYIA 250


>gi|74316964|ref|YP_314704.1| 3-demethylubiquinone-9 3-methyltransferase [Thiobacillus
           denitrificans ATCC 25259]
 gi|109895925|sp|Q3SK91.1|UBIG_THIDA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|74056459|gb|AAZ96899.1| ubiquinone biosynthesis O-methyltransferase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 232

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 139/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKFS +A  WWD    +KPLH +NP RL ++ +              P  G 
Sbjct: 2   SNVDAAEIAKFSELAHRWWDPNSEFKPLHEINPLRLRWVDTR------------APLAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGIL+E +A +GATV+GID  EK +K+ARLH  L     +++Y   +AE   
Sbjct: 50  KVLDVGCGGGILAEAMAGVGATVSGIDLSEKALKVARLH--LYESGKSVDYELVSAEDYA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
                +FD V   E++EHV DPA    + + L    G    ST+NR+ ++Y  A++ AE+
Sbjct: 108 AAHPGEFDVVTCMEMLEHVPDPASVVAACARLVKPGGWVFFSTLNRNAKSYLLAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH ++ F+ P EL  + + A ++ +E+ G  YNPLT  + L  D  VN++
Sbjct: 168 ILKLLPRGTHDYAKFIKPAELARMAREAGLETEELTGMTYNPLTKVYRLEADTDVNYL 225


>gi|398839968|ref|ZP_10597208.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM102]
 gi|398859091|ref|ZP_10614773.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM79]
 gi|398111556|gb|EJM01438.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM102]
 gi|398237704|gb|EJN23450.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM79]
          Length = 232

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERV------------HLAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFKMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|146306876|ref|YP_001187341.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas mendocina
           ymp]
 gi|145575077|gb|ABP84609.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas mendocina
           ymp]
          Length = 234

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 4   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 52  RVLDVGCGGGILSEAMAQRGATVTGIDMGEAPLSVAQLH-QLESGVE-VEYRQITAEALA 109

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   L    G    STINR+ ++Y  A+I AE+
Sbjct: 110 EEMPGQFDVVTCLEMLEHVPDPSSVIRACHRLVKPGGQVFFSTINRNPKSYLFAVIGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L  D+ VN++
Sbjct: 170 ILRLLPRGTHDFKKFIRPSELGAWSRAAGLEVKDIIGLTYNPLTKHYKLEADVDVNYM 227


>gi|297183684|gb|ADI19809.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase
           [uncultured alpha proteobacterium EB000_37G09]
          Length = 253

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 148/246 (60%), Gaps = 8/246 (3%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH--FRKDPYSARPFE 160
            ++  +++ +F+A+A++WWD  GP KPLH   P RL +IR ++        +  S  PF 
Sbjct: 9   GTIDQSDINRFNALANSWWDETGPMKPLHLFTPIRLDYIRKSIQNRGLVPAETSSDLPFA 68

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
            LNI+D+GCGGG+L+EP+AR+GATVT IDA +  I  A  HA        I+Y C  +E+
Sbjct: 69  HLNILDIGCGGGLLAEPIARLGATVTAIDASDGAIAAATAHAT--DHNIAIDYRCMASEE 126

Query: 221 LV---EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           L    + Q  FD + ASEVIEHV+D   F +++  L   +G  VI+TINR+M A   A  
Sbjct: 127 LAAIADYQHHFDVIYASEVIEHVSDIKAFTETIGQLLAPDGVVVITTINRTMPALLFAKF 186

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
           AAE++L  +P GTHQ+  F+ P EL  + Q   I + ++ GFV  P+ G + +S   +VN
Sbjct: 187 AAEYVLKIVPAGTHQFEKFVRPAELRAVFQECGILIDDVTGFVPTPM-GTFKMSPITAVN 245

Query: 338 FIAFGT 343
           + A G+
Sbjct: 246 YGAAGS 251


>gi|402703258|ref|ZP_10851237.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           helvetica C9P9]
          Length = 241

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 136/243 (55%), Gaps = 11/243 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +   +            L
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTQYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ NI+ A  +A        I Y  +T E+L 
Sbjct: 55  EILDVGCGGGLVATPLAAQGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           +  + +D VI  EVIEHV +  +F  +L       G  +ISTINR+ +AY   II AE++
Sbjct: 112 KSDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYV 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAF 341
           L W+PK TH +S FL P E+  +L    I++KE+ G VY+     W L+DDI VN FI  
Sbjct: 172 LGWVPKNTHDYSKFLKPLEIYEMLTDTEIEIKELKGLVYDLAKNEWKLNDDIDVNYFICL 231

Query: 342 GTK 344
           G K
Sbjct: 232 GRK 234


>gi|59802375|ref|YP_209087.1| 3-demethylubiquinone-9 3-methyltransferase [Neisseria gonorrhoeae
           FA 1090]
 gi|59719270|gb|AAW90675.1| putative 3-demethylubiquinone-9 3-methyltransferase [Neisseria
           gonorrhoeae FA 1090]
          Length = 242

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+AKFS IAD WWD  G +K LH +NP RL +I          D ++     G  
Sbjct: 11  NVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLRLDYI----------DGHA--DLRGKR 58

Query: 164 IVDVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           ++DVGCGGGIL+E +AR GA  V GID  E++++ ARLHA L+   + IEY C   E L 
Sbjct: 59  VLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALN-NVADIEYECVRVEDLA 117

Query: 223 -EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E   FD V   E++EHV DPA   ++ + L   +     STIN++ ++Y   I+AAE+
Sbjct: 118 GAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVRPDSMVFFSTINKNPKSYLHLIVAAEY 177

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L ++PKGTH W  F++P EL  + ++A +DV +  G  Y+ L+  ++L D   VN++
Sbjct: 178 LLKFVPKGTHDWKKFISPAELARMCRQAGLDVADTKGMTYHVLSQTYALCDSTDVNYM 235


>gi|357404854|ref|YP_004916778.1| 3-demethylubiquinone-9 3-methyltransferase [Methylomicrobium
           alcaliphilum 20Z]
 gi|351717519|emb|CCE23184.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) [Methylomicrobium alcaliphilum
           20Z]
          Length = 235

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF ++A+ WWD  G +K LH +NP R+ FI+                  G  IVDVG
Sbjct: 11  EINKFGSLAERWWDTSGEFKTLHDINPLRIRFIQEH------------AEINGKRIVDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE LA+ GA + GID  E+ I IA LH  L+   +   Y   +AE L +EQ   
Sbjct: 59  CGGGILSEGLAKNGADMLGIDLSEELIDIADLHG-LESGINA-HYRKISAEALADEQPEG 116

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    ST+NR  +AY  AI+AAE++L  LP
Sbjct: 117 FDHVTCMEMLEHVPDPASIVRACAKLVKPGGTVFFSTLNRKPKAYLLAIVAAEYVLRMLP 176

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH + +F+ P EL    +   ++++ MAG  YNPLT R+SL  DI VN++A
Sbjct: 177 KGTHDFKTFIKPSELSRWARETGLELQSMAGIEYNPLTKRFSLGKDIDVNYLA 229


>gi|197335318|ref|YP_002156003.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio fischeri MJ11]
 gi|226725568|sp|B5FDT8.1|UBIG_VIBFM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|197316808|gb|ACH66255.1| 3-demethylubiquinone-9 3-O-methyltransferase [Vibrio fischeri MJ11]
          Length = 234

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 140/238 (58%), Gaps = 16/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RL ++             +A    G  ++DV
Sbjct: 10  AEIKKFEDMASRWWDLEGEFKPLHQINPLRLNYVLE-----------NANGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGIL+E +A+ GA V G+D  ++ + +ARLHA    ET T +EY  +TAE+  EE  
Sbjct: 59  GCGGGILAESMAKQGADVVGLDMGKEPLTVARLHA---LETGTKLEYVQSTAEQHAEENP 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D V   E++EHV DP    +S + +    G    ST+NR++++Y  AI+ AE +L  
Sbjct: 116 ETYDVVTCMEMLEHVPDPLSVIRSCAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEQLLKL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           +PKGTH  + F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct: 176 VPKGTHDHNKFIRPSELLKMLDQTALQERGITGLHYNPLTDTYSLGKNVDVNYIVHTT 233


>gi|398938560|ref|ZP_10667914.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp.
           GM41(2012)]
 gi|398165601|gb|EJM53716.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp.
           GM41(2012)]
          Length = 232

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE +A+ GATV GID  E  + +A+LH  L+   S +EY   TAE L 
Sbjct: 50  KVLDIGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|440745153|ref|ZP_20924449.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP39023]
 gi|440372829|gb|ELQ09607.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae BRIP39023]
          Length = 232

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   ++D V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 VLNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225


>gi|117925420|ref|YP_866037.1| 3-demethylubiquinone-9 3-methyltransferase [Magnetococcus marinus
           MC-1]
 gi|117609176|gb|ABK44631.1| 3-demethylubiquinone-9 3-methyltransferase [Magnetococcus marinus
           MC-1]
          Length = 241

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 134/237 (56%), Gaps = 9/237 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A  WWD  G ++ LH +NP R+ +I+  L    + D        G+N++D+G
Sbjct: 9   EIAKFERMAHEWWDPAGKFRTLHEINPARVGYIKEILTGSAQGD------LAGINLLDIG 62

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E +A  GA V GID  EK I IA  H       S+  Y   +A +L E Q   
Sbjct: 63  CGGGILAEAMADNGANVVGIDRSEKIIGIATAHQA--ESGSSASYRMQSAAELAEAQPAS 120

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V+A EV+EHV D   F    + L    G    +T+NR+ +++  AI+ AE++L WLP
Sbjct: 121 FDVVLAMEVLEHVPDMTAFLGDCANLLKPGGTLFFATLNRTPKSWLFAIMGAEYLLRWLP 180

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTHQ+  F+ P EL   LQ   ++++ + G  YNP+   W LSDD  VN++    K
Sbjct: 181 RGTHQFEKFVKPSELRTALQSNGLEMQAVRGLSYNPINATWRLSDDTQVNYLGHALK 237


>gi|385330968|ref|YP_005884919.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter adhaerens
           HP15]
 gi|311694118|gb|ADP96991.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter adhaerens
           HP15]
          Length = 246

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 17/234 (7%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    +KPLH +NP RL +I   +               G   +DVG
Sbjct: 18  EIAKFEALASRWWDPSSEFKPLHDINPLRLNYIDERVS------------LAGKRALDVG 65

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-- 226
           CGGG+LSE +A+ GA VTGID  E  + +ARLH         ++Y   T E+L E+    
Sbjct: 66  CGGGLLSEGMAQRGAHVTGIDMGEAPLAVARLHGM--ESGVNVDYRQITIEELAEDSEHA 123

Query: 227 -KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   +S +A+    G   +STINR+ +++  AI+ AE++L  
Sbjct: 124 GQYDVVTCLEMLEHVPDPASVVRSCAAMLKPGGHLFVSTINRNPKSFLFAIVGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH+W  F+ P E+   L+ A ++V+E+ G  YNP+T  + L  D+ VN++
Sbjct: 184 LPKGTHEWKKFIRPSEMSDHLRHAGLEVRELTGMTYNPVTKVYKLGRDVDVNYL 237


>gi|358448852|ref|ZP_09159347.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter
           manganoxydans MnI7-9]
 gi|357227002|gb|EHJ05472.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter
           manganoxydans MnI7-9]
          Length = 238

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 136/234 (58%), Gaps = 17/234 (7%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    +KPLH +NP RL +I   +               G   +DVG
Sbjct: 10  EIAKFEALASRWWDPSSEFKPLHDINPLRLNYIDERVS------------LAGKRALDVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-- 226
           CGGG+LSE +A+ GA VTGID  E  + +ARLH         ++Y   T E+L E+    
Sbjct: 58  CGGGLLSEGMAQRGAHVTGIDMGEAPLAVARLHGM--ESGVNVDYRQITIEELAEDSEHA 115

Query: 227 -KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   +S +A+    G   +STINR+ +++  AI+ AE++L  
Sbjct: 116 GQYDVVTCLEMLEHVPDPASVVRSCAAMLKPGGHLFVSTINRNPKSFLFAIVGAEYVLRL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH+W  F+ P E+   L+ A ++V+E+ G  YNP+T  + L  D+ VN++
Sbjct: 176 LPKGTHEWKKFIRPSEMSDHLRHAGLEVRELTGMTYNPVTKVYKLGRDVDVNYL 229


>gi|452746118|ref|ZP_21945945.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri NF13]
 gi|452010022|gb|EME02228.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri NF13]
          Length = 232

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 137/239 (57%), Gaps = 15/239 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKL 221
            ++D+GCGGGILSE +A+ GA VTGID  E  + +ARLH  L      I+Y   T     
Sbjct: 50  KVIDIGCGGGILSEAMAQRGAQVTGIDMGEAPLSVARLH--LLESGLEIDYRQITAEAMA 107

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++  AL    G    STINR+ +AYA AII AE+
Sbjct: 108 EEAPEQFDVVTCLEMLEHVPDPASVIRACCALVKPGGQVFFSTINRNPKAYAFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +L  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++ 
Sbjct: 168 VLQLLPRGTHDFKKFIRPSELGAWSRDAGLVVKDIIGLTYNPLTKHYKLAADVDVNYMV 226


>gi|399002583|ref|ZP_10705266.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM18]
 gi|398124498|gb|EJM14006.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM18]
          Length = 232

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +    +K           
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVNLADKK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 51  -VLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|443474264|ref|ZP_21064284.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas
           pseudoalcaligenes KF707]
 gi|442905271|gb|ELS30113.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas
           pseudoalcaligenes KF707]
          Length = 232

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 138/238 (57%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++ H E+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   TNVDHVEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVS------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSESMAQRGATVTGIDMGEAPLAVAQLH-QLESGVP-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++   L    G    STINR+ +AY  AI+ AE+
Sbjct: 108 AEMPGQFDVVTCMEMLEHVPDPASVIRACHTLVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L  D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRAAGLSVKDIIGLTYNPLTKHYKLEADVDVNYM 225


>gi|94499386|ref|ZP_01305923.1| 3-demethylubiquinone-9 3-methyltransferase [Bermanella marisrubri]
 gi|94428140|gb|EAT13113.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanobacter sp. RED65]
          Length = 235

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+AKF A+A  WWD E  +KPLH +NP R  FI          D ++     G 
Sbjct: 2   ANVDQSEVAKFEALASRWWDKESEFKPLHDINPLRTNFI----------DGHAG--LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GA VTG+D  E  + +A+LHA L+ + + I+Y     E+L 
Sbjct: 50  RVLDVGCGGGILSEAMAQRGAQVTGLDMGEAPLTVAKLHA-LESQLN-IDYKQLPVEELA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E++   FD V   EV+EHV DPA   K+   L    G    ST+NR+ ++Y  AII AE+
Sbjct: 108 EQEPASFDVVTCLEVLEHVPDPASIVKACFDLCKPGGHVFFSTLNRNPKSYLLAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L+ LPKGTH +  F+ P EL    + A + V E+ G  YNP+T  + L+ D  VN++
Sbjct: 168 VLNMLPKGTHDYRKFIRPSELAKYCREAGLQVGELKGMTYNPITKTYKLARDTDVNYL 225


>gi|17545617|ref|NP_519019.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia solanacearum
           GMI1000]
 gi|17427910|emb|CAD14600.1| probable 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (dhhb methyltransferase) protein [Ralstonia solanacearum
           GMI1000]
          Length = 260

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 133/232 (57%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+ST             P  G  +VDV
Sbjct: 33  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSTA------------PLAGKRVVDV 80

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 81  GCGGGILSESMARAGANVKGIDLSRKALRVADLHS-LEAGVAVDYEEIAAEALAAREPGS 139

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 140 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 199

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNPLTGR++L+ D SVN++
Sbjct: 200 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPLTGRYALTHDTSVNYL 251


>gi|94497249|ref|ZP_01303821.1| ubiquinone biosynthesis O-methyltransferase [Sphingomonas sp.
           SKA58]
 gi|94423354|gb|EAT08383.1| ubiquinone biosynthesis O-methyltransferase [Sphingomonas sp.
           SKA58]
          Length = 248

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 145/240 (60%), Gaps = 6/240 (2%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++   E A F A+A  WWD +G    LH LNP RL +IR+ + + +     + RP 
Sbjct: 8   NAQATIDPKEAAHFGAMAADWWDPQGSSAMLHKLNPVRLRYIRAAIDQQWPGREKAFRPL 67

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EG   +DVGCG G+L+EPLAR+GA+VTG+DA  +NI  A  HA  + +  TI+Y  T  E
Sbjct: 68  EGRRALDVGCGAGLLTEPLARLGASVTGLDAAPENIAAALSHA--ESQGLTIDYRATPVE 125

Query: 220 KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAA 279
           ++ E    FD V + EVIEHV DPA F ++L++    +G  ++ST NR+  +    I   
Sbjct: 126 EMAEG--GFDLVTSMEVIEHVVDPATFVRALASKVSPDGLLILSTPNRTPLSRIAMITVG 183

Query: 280 EHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           E I   +PKGTH W  FLTPEEL  +L  A +DV + +G  ++P  G + LS + ++N++
Sbjct: 184 ESI-GGIPKGTHDWGKFLTPEELTALLDAAGMDVIDSSGLSFDPARG-FCLSANKAINYL 241


>gi|333369973|ref|ZP_08462057.1| 3-demethylubiquinone-9 3-O-methyltransferase [Psychrobacter sp.
           1501(2011)]
 gi|332968815|gb|EGK07863.1| 3-demethylubiquinone-9 3-O-methyltransferase [Psychrobacter sp.
           1501(2011)]
          Length = 288

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 143/238 (60%), Gaps = 7/238 (2%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  +E+ KF+ +A  WWD +GP+  LH +NP RL +I   + R+ +          G 
Sbjct: 50  NNVDMSEIGKFTQLASQWWDKQGPFATLHEINPLRLNWIEENVIRYMKTG------LTGK 103

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGIL+E +AR GA  TG+D   +N++ A +HA+ +  T  + Y     E+L 
Sbjct: 104 TVLDVGCGGGILTESMARRGADATGVDLGLENLQAASIHAEQNGLTDRLRYKHIAIEQLA 163

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            EQ   +D V   E++EHV DP++  ++   L    G  V+STINR+ ++Y  AII AE+
Sbjct: 164 AEQPESYDVVTCMEMLEHVPDPSQIVQACFDLLKPGGVCVLSTINRNPKSYLFAIIGAEY 223

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  L +GTH ++ F+TP EL  +   A  + +++ G  YNP+T R+ L+ ++ VN++
Sbjct: 224 VLGLLDRGTHDYAKFITPAELDKMAITAGFNRQDLIGLHYNPITKRYWLAQNVDVNYM 281


>gi|421503644|ref|ZP_15950590.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           mendocina DLHK]
 gi|400345471|gb|EJO93835.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           mendocina DLHK]
          Length = 232

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/238 (41%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATVTGID  E  + +A+LH  L+     +EY   TAE L 
Sbjct: 50  RMLDVGCGGGILSEAMAQRGATVTGIDMGEAPLSVAQLH-QLESGVE-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   L    G    STINR+ ++Y  A+I AE+
Sbjct: 108 EEMPGQFDVVTCLEMLEHVPDPSSVIRACHRLVKPGGQVFFSTINRNPKSYLFAVIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  LP+GTH +  F+ P EL    + A ++VK++ G  YNPLT  + L  D+ VN++
Sbjct: 168 ILRLLPRGTHDFKKFIRPSELGAWSRAAGLEVKDIIGLTYNPLTKHYKLEADVDVNYM 225


>gi|381395012|ref|ZP_09920719.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola punicea DSM
           14233 = ACAM 611]
 gi|379329290|dbj|GAB55852.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola punicea DSM
           14233 = ACAM 611]
          Length = 268

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 138/232 (59%), Gaps = 3/232 (1%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A+ WWD  G YK     N  R+ +  + +C  ++ D  + +P +GL I+DVG
Sbjct: 28  EIAKFDALAENWWDPNGKYKTALEFNRARVEYFIAQICDFYKLDINAEKPLKGLRILDVG 87

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQRK 227
           CGGG++ EPLA+ GA VTG+D  E +I++A+ HA +      I Y     +  +E  +  
Sbjct: 88  CGGGLVCEPLAQAGAEVTGLDVSEMSIEVAKRHALMS--KLKINYIHEHTQNFIESNESP 145

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD VI +EVIEHV +  E     S L  + G  +++T+NR+++++   I+ AE+I+ +LP
Sbjct: 146 FDVVINAEVIEHVPNQKELVSHCSKLCKAGGCVIMATLNRTIKSFVVGIVGAEYIMRYLP 205

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH W  F+TP EL  +   + + +    G  Y+  T RW LS  ++VN++
Sbjct: 206 RGTHTWHFFVTPFELNSMGSVSRLKLIAEIGMSYSLFTKRWRLSKSVAVNYV 257


>gi|423685946|ref|ZP_17660754.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio fischeri
           SR5]
 gi|371494014|gb|EHN69612.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio fischeri
           SR5]
          Length = 234

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 140/238 (58%), Gaps = 16/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RL ++             +A    G  ++DV
Sbjct: 10  AEIKKFEDMASRWWDLEGEFKPLHQINPLRLNYVLE-----------NANGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGIL+E +A+ GA V G+D  ++ + +ARLHA    ET T +EY  +TAE+  EE  
Sbjct: 59  GCGGGILAESMAKQGADVIGLDMGKEPLTVARLHA---LETGTKLEYVQSTAEQHAEENP 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D V   E++EHV DP    +S + +    G    ST+NR++++Y  AI+ AE +L  
Sbjct: 116 ETYDVVTCMEMLEHVPDPLSVIRSCAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEQLLKL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           +PKGTH  + F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct: 176 VPKGTHDHNKFIRPSELLKMLDQTALQERGITGLHYNPLTDSYSLGKNVDVNYIVHTT 233


>gi|269468626|gb|EEZ80270.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [uncultured SUP05 cluster bacterium]
          Length = 232

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 137/240 (57%), Gaps = 13/240 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KF+A+A  WWD    +KPLH +NP RL +I+           +     +  
Sbjct: 2   SNVDFEEVDKFTALASRWWDKNSEFKPLHDINPLRLNYIKE----------HCGGSLKNK 51

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGGILSE +A  GA+VTGID  E  +++A+LH  L      ++Y     E+L 
Sbjct: 52  KILDVGCGGGILSESMALEGASVTGIDMAEAGLEVAKLH--LLESGLDVDYQKIPVEELA 109

Query: 223 EEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E+   +FD V   E++EHV DP+   K+ + L    G    STINR+ ++Y  AII AE+
Sbjct: 110 EKHAGEFDVVTCLEMLEHVPDPSSIIKACAKLVKPGGQVFFSTINRNPKSYLFAIIGAEY 169

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L  LP+GTH W  F+ P E+    + A + +K M G  YNP T  + L  D+SVN++ F
Sbjct: 170 VLKLLPQGTHDWDKFIQPSEMDEWARHAGLSLKTMIGMTYNPFTKVYKLEHDVSVNYLCF 229


>gi|296116152|ref|ZP_06834770.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295977258|gb|EFG84018.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 249

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/252 (40%), Positives = 144/252 (57%), Gaps = 12/252 (4%)

Query: 92  QLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           QL+++     P S+  +E+A+FS +A+ WWD  GP +PLHA+N  R+++  + L      
Sbjct: 2   QLHDSSAQG-PGSVSPSEIARFSELAERWWDPAGPMRPLHAMNDLRISWSLARL-----P 55

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ET 208
            P   R      ++D+GCG G+ SE  AR G  VTG+DA    I   R H    P    +
Sbjct: 56  APADDRGTR-RTLLDIGCGAGLASEAFARAGFDVTGLDASSAAITAGRQHLRHHPLPAGS 114

Query: 209 STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
             + Y C +AE+L  E  +FDA+ A EVIEHV DPA F   L+ +    G  V+ST+NR+
Sbjct: 115 GPLAYRCGSAEELCAEGAQFDAISALEVIEHVTDPAAFLGMLATMLRPGGVLVVSTMNRT 174

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
           +R+ A A I AE++L  LP GTH+W  F+TP EL     RA + + ++AG V  P  G W
Sbjct: 175 LRSLAMAKIGAEYVLRLLPVGTHEWRKFITPAELGQQAVRAGLRIADIAGMV--PALGGW 232

Query: 329 SLSDDISVNFIA 340
             S D+ VN+IA
Sbjct: 233 RESRDLGVNYIA 244


>gi|377576522|ref|ZP_09805506.1| 3-demethylubiquinone-9 3-methyltransferase [Escherichia hermannii
           NBRC 105704]
 gi|377542554|dbj|GAB50671.1| 3-demethylubiquinone-9 3-methyltransferase [Escherichia hermannii
           NBRC 105704]
          Length = 244

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 22/250 (8%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++   E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKSPIAHNVDRGEIAKFEAVASRWWDTEGEFKPLHRINPLRLGYITERAGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-----DLDPETS 209
                 G  ++DVGCGGGILSE +AR GATVTG+D   + +++ARLHA     +LD    
Sbjct: 57  ------GKTVLDVGCGGGILSESMARQGATVTGLDMGAEPLQVARLHALESGVELDYVQE 110

Query: 210 TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
           T+E      E   +   K+D V   E++EHV DPA   K+ + L    G    ST+NR+ 
Sbjct: 111 TVE------EHAAKHPEKYDVVTCMEMLEHVPDPASVVKACARLVKPGGHVFFSTLNRNG 164

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
           +++  A++ AE+IL  +PKGTH    F+ P EL+  +   ++  + M G  +NPLT R++
Sbjct: 165 KSWLMAVVGAEYILRMVPKGTHDIKKFIKPAELLSWVDGTTLQERHMTGLHFNPLTNRFT 224

Query: 330 LSDDISVNFI 339
           L   + VN++
Sbjct: 225 LGPGVDVNYM 234


>gi|59711810|ref|YP_204586.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio fischeri ES114]
 gi|75354071|sp|Q5E5J8.1|UBIG_VIBF1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|59479911|gb|AAW85698.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio fischeri
           ES114]
          Length = 234

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 140/238 (58%), Gaps = 16/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RL ++             +A    G  ++DV
Sbjct: 10  AEIKKFEDMASRWWDLEGEFKPLHQINPLRLNYVLE-----------NANGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGIL+E +A+ GA V G+D  ++ + +ARLHA    ET T +EY  +TAE+  EE  
Sbjct: 59  GCGGGILAESMAKQGADVIGLDMGKEPLTVARLHA---LETGTKLEYVQSTAEQHAEENP 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D V   E++EHV DP    +S + +    G    ST+NR++++Y  AI+ AE +L  
Sbjct: 116 ETYDVVTCMEMLEHVPDPLSVIRSCAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEQLLKL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           +PKGTH  + F+ P EL+ +L + ++  + + G  YNPLT  +SL  ++ VN+I   T
Sbjct: 176 VPKGTHDHNKFIRPSELLKMLDQTALQERGITGLHYNPLTDTYSLGKNVDVNYIVHTT 233


>gi|253999388|ref|YP_003051451.1| ubiquinone biosynthesis O-methyltransferase [Methylovorus
           glucosetrophus SIP3-4]
 gi|253986067|gb|ACT50924.1| ubiquinone biosynthesis O-methyltransferase [Methylovorus
           glucosetrophus SIP3-4]
          Length = 239

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 142/251 (56%), Gaps = 16/251 (6%)

Query: 96  NKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +K  S P  ++  AEL KF+ +A  WWD    +KPLH +NP RL  I          D  
Sbjct: 3   SKTQSIPGVNVDPAELQKFATLAHRWWDPNSEFKPLHDINPLRLQLI----------DEL 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
           +    +G  +VDVGCGGGILSE ++  GA VTGID  EK +K+A LH  L+   + + Y 
Sbjct: 53  AG--LQGKRVVDVGCGGGILSESMSARGADVTGIDLGEKALKVAELH-RLE-SGANVNYR 108

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
               E L +EQ   FD V   E++EHV DPA   ++ + L    G    ST+NR+ ++Y 
Sbjct: 109 LIEVEALAQEQPGSFDVVTCMEMLEHVPDPAAVVRACATLVKQGGHVFFSTLNRNPKSYL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A+I AE++L+ LPKGTH+++ F+ P EL    + A + V  M G  YNPL   +SL  D
Sbjct: 169 FAVIGAEYVLNMLPKGTHEYAKFIKPSELAEWAREAGLTVSGMRGMSYNPLRKHYSLGTD 228

Query: 334 ISVNFIAFGTK 344
           +SVN+I    K
Sbjct: 229 VSVNYIMHTVK 239


>gi|398890628|ref|ZP_10644183.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM55]
 gi|398187894|gb|EJM75218.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM55]
          Length = 232

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLASDVDVNYM 225


>gi|241662452|ref|YP_002980812.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia pickettii
           12D]
 gi|240864479|gb|ACS62140.1| ubiquinone biosynthesis O-methyltransferase [Ralstonia pickettii
           12D]
          Length = 238

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  IVDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSI------------TPLAGKRIVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 59  GCGGGILSESMARAGAIVKGIDLSRKALRVADLHS-LEAGVTVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGYVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL   ++ A +  +EM G  YNP+T R++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELSAFVRAAGLQAQEMRGLEYNPITARYALTQDTSVNYL 229


>gi|383484289|ref|YP_005393202.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           parkeri str. Portsmouth]
 gi|378936643|gb|AFC75143.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           parkeri str. Portsmouth]
          Length = 289

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEL 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN FI  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFICLGRK 283


>gi|410613149|ref|ZP_11324217.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola psychrophila
           170]
 gi|410167291|dbj|GAC38106.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola psychrophila
           170]
          Length = 245

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 137/238 (57%), Gaps = 6/238 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+A +  +A TWWD +GP+ PLH LN  R+ +I   L    +K     +P  GL ++D+G
Sbjct: 13  EVAYYEKLAGTWWDIDGPFWPLHKLNALRIDWILGQLKTQNQKQ----QPLAGLKVLDIG 68

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE LA+ GA VT ID V+KNI +A+ HA  +     I+Y   + EK+VE +++F
Sbjct: 69  CGGGILSESLAKQGADVTAIDVVDKNIMVAKAHAKQN--GLKIDYKLISVEKMVETKQQF 126

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   EV+EHV D + F +S +AL   +G   I++INR+  A+  AI  AE++   LPK
Sbjct: 127 DLVFNMEVVEHVVDVSSFIRSCNALVKPQGTQFIASINRNWLAFIIAIFGAEYVTGLLPK 186

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           GTH ++  + P E++ +L     ++    G   NP+     L     VN++    K S
Sbjct: 187 GTHHYNKLVKPSEIIPLLHDDGFELIATTGVAVNPIKRSMKLIKPTWVNYMLAAQKQS 244


>gi|117618918|ref|YP_856854.1| ubiquinone biosynthesis O-methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117560325|gb|ABK37273.1| ubiquinone biosynthesis O-methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 255

 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/250 (39%), Positives = 149/250 (59%), Gaps = 15/250 (6%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
            +++K  + +++   E+AKF AIA  WWD EG +KPLH +NP RL +I       F    
Sbjct: 13  QDHQKMHSDANVDLTEIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF---- 68

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY 213
                  G  I+D+GCGGGIL+E +AR GA VTGID  ++ + +ARLHA L+     +EY
Sbjct: 69  -------GKRILDIGCGGGILAESMARRGAKVTGIDMGKEPLGVARLHA-LEAGVE-LEY 119

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              TAE   +E   ++D V   E++EHV DPA   ++++ L    G   +STINR+ +AY
Sbjct: 120 RQITAEAHADEAPGQYDVVTCMEMLEHVPDPASVLRAIATLVRPGGKVFVSTINRNPKAY 179

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
              I+ AE+++  +PKGTH    F+TP EL  + + A + V++M+G  Y PL+  + L  
Sbjct: 180 LMMILGAEYLMKMVPKGTHDHKKFITPAELCRMGEAAGLQVRDMSGVHYAPLSNSFKLGR 239

Query: 333 DISVNF-IAF 341
           ++ VN+ +AF
Sbjct: 240 NVDVNYMVAF 249


>gi|445413653|ref|ZP_21433646.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter sp.
           WC-743]
 gi|444765453|gb|ELW89747.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter sp.
           WC-743]
          Length = 237

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 13/234 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  I+DVG
Sbjct: 10  EIAKFEALAALWWDQHSEFRPLHQINPLRLNWIDE-----------HANGLTGKKILDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID     + +ARLHA+ +     IEY     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGAAPLNVARLHAEQE-NVHNIEYRQIPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AII AE++L  L 
Sbjct: 118 YDIVTCMEMLEHVPDPASIIQACQKLVKPNGHVFFSTINRNPKSYLFAIIGAEYVLRLLK 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           KGTH +  F+ P EL   ++++ + +K+M G  YNPLT  + L+ ++ VN++ +
Sbjct: 178 KGTHDYHKFIKPSELAHDIRQSGLTLKDMTGLHYNPLTKHYWLAPNVDVNYMVY 231


>gi|398879365|ref|ZP_10634460.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM67]
 gi|398885430|ref|ZP_10640342.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM60]
 gi|398192558|gb|EJM79707.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM60]
 gi|398196528|gb|EJM83529.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM67]
          Length = 232

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 142/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDIGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G   +STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFKMVKPGGQVFLSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|423201631|ref|ZP_17188210.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AER39]
 gi|404616663|gb|EKB13616.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AER39]
          Length = 238

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F           G  I+D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF-----------GKRILDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE-KLVEEQRK 227
           CGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   +EY   TAE    E   +
Sbjct: 60  CGGGILSESMARRGARVTGIDMGKEPLGVARLHA-LE-QGVELEYRQITAEAHAAEVPSQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++++ L    G   +STINR+ ++Y   II AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLRAIATLVRPGGRVFVSTINRNPKSYLMMIIGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH    F+TP EL  + + A + V++M+G  Y PLT ++ L  ++ VN++ 
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLTNQFKLGKNVDVNYMV 230


>gi|330829609|ref|YP_004392561.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii B565]
 gi|406677147|ref|ZP_11084332.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AMC35]
 gi|423209751|ref|ZP_17196305.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AER397]
 gi|328804745|gb|AEB49944.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii B565]
 gi|404617609|gb|EKB14545.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AER397]
 gi|404625461|gb|EKB22278.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AMC35]
          Length = 238

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 140/233 (60%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F           G  I+D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF-----------GKRILDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE-KLVEEQRK 227
           CGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   +EY   TAE    E   +
Sbjct: 60  CGGGILSESMARRGAKVTGIDMGKEPLGVARLHA-LE-QGVELEYRQITAEAHAAEVPGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++++ L    G   +STINR+ ++Y   II AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLRAIATLVRPGGRVFVSTINRNPKSYLMMIIGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH    F+TP EL  + + A + V++M+G  Y PLT ++ L  ++ VN++ 
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLTNQFKLGKNVDVNYMV 230


>gi|313201410|ref|YP_004040068.1| ubiquinone biosynthesis o-methyltransferase [Methylovorus sp.
           MP688]
 gi|312440726|gb|ADQ84832.1| ubiquinone biosynthesis O-methyltransferase [Methylovorus sp.
           MP688]
          Length = 239

 Score =  182 bits (461), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/251 (40%), Positives = 143/251 (56%), Gaps = 16/251 (6%)

Query: 96  NKKHSAPS-SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +K  S P  ++  AEL KF+ +A  WWD    +KPLH +NP RL  I          D  
Sbjct: 3   SKTQSIPGVNVDPAELQKFATLAHRWWDPNSEFKPLHDINPLRLQLI----------DEL 52

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
           +    +G  +VDVGCGGGILSE ++  GA VTGID  EK +K+A LH  L+   +++ Y 
Sbjct: 53  AG--LQGKRVVDVGCGGGILSESMSARGADVTGIDLGEKALKVAELH-RLE-SGASVNYR 108

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
               E L +EQ   FD V   E++EHV DPA   ++ + L    G    ST+NR+ ++Y 
Sbjct: 109 LIEVEALAQEQPGSFDVVTCMEMLEHVPDPAAVVRACATLVKPGGHVFFSTLNRNPKSYL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A+I AE++L+ LPKGTH+++ F+ P EL    + A + V  M G  YNPL   +SL  D
Sbjct: 169 FAVIGAEYVLNMLPKGTHEYAKFIKPSELAEWAREAGLTVSGMRGMGYNPLRKHYSLGTD 228

Query: 334 ISVNFIAFGTK 344
           +SVN+I    K
Sbjct: 229 VSVNYIMHTVK 239


>gi|403051153|ref|ZP_10905637.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           bereziniae LMG 1003]
          Length = 237

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 135/234 (57%), Gaps = 13/234 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I              A    G  I+DVG
Sbjct: 10  EIAKFEALAALWWDQHSEFRPLHQINPLRLNWIDE-----------HANGLTGKKILDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID     + +ARLHA+ +     IEY     E+L EEQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGAAPLNVARLHAEQE-NVYNIEYRQIPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AII AE++L  L 
Sbjct: 118 YDIVTCMEMLEHVPDPASIIQACQKLVKPNGHVFFSTINRNPKSYLFAIIGAEYVLRLLK 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           KGTH +  F+ P EL   ++++ + +K+M G  YNPLT  + L+ ++ VN++ +
Sbjct: 178 KGTHDYHKFIKPSELAHDIRQSGLTLKDMTGLHYNPLTKHYWLAANVDVNYMVY 231


>gi|422322105|ref|ZP_16403147.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
           xylosoxidans C54]
 gi|317402976|gb|EFV83515.1| 3-demethylubiquinone-9 3-methyltransferase [Achromobacter
           xylosoxidans C54]
          Length = 242

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/234 (43%), Positives = 141/234 (60%), Gaps = 14/234 (5%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF A+A  WWD E  +KPLHA+NP RL +I+            S     G  ++D
Sbjct: 17  QAELDKFGALASRWWDPESEFKPLHAINPLRLEWIQE-----------SVGSLAGKKVLD 65

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGGILSE +AR GA VTGID  +K++KIA+LH  L+     +EY     E+L  EQ 
Sbjct: 66  VGCGGGILSEAMARSGAQVTGIDLADKSLKIAKLHG-LESGVK-VEYRKVPVEQLAAEQP 123

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ +ALT   G    ST+NR+ +++  AII AE++L  
Sbjct: 124 GQYDVVTCMEMLEHVPDPASIVRACAALTKPGGWVFFSTLNRNPKSFLFAIIGAEYVLRL 183

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LP+GTH +  F+ P EL    + A ++   M G  YNP+T  +SL+ D SVN++
Sbjct: 184 LPRGTHTYDMFIKPSELAAAARGAGLEPVGMRGMEYNPITQIYSLTSDTSVNYL 237


>gi|309781034|ref|ZP_07675772.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ralstonia sp.
           5_7_47FAA]
 gi|404394053|ref|ZP_10985857.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia sp.
           5_2_56FAA]
 gi|308920100|gb|EFP65759.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ralstonia sp.
           5_7_47FAA]
 gi|348614261|gb|EGY63813.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia sp.
           5_2_56FAA]
          Length = 238

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 132/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSI------------TPLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 59  GCGGGILSESMARAGAIVKGIDLSRKALRVADLHS-LEAGVTVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGYVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL   ++ A +  +EM G  YNP+T R++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELSAFVRTAGLQAQEMRGLEYNPITARYALTQDTSVNYL 229


>gi|358011301|ref|ZP_09143111.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. P8-3-8]
          Length = 237

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 95/234 (40%), Positives = 136/234 (58%), Gaps = 13/234 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I          D +S     G  I+DVG
Sbjct: 10  EIAKFEALAALWWDQHSEFRPLHQINPLRLNWI----------DEHSGG-LAGKKILDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGILSE +AR GA V GID     + +ARLHA+ +     IEY     E+L EEQ  +
Sbjct: 59  CGGGILSESMARRGADVLGIDMGAAPLNVARLHAEQE-NVHNIEYRQVPVEQLAEEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AI+ AE++L  L 
Sbjct: 118 YDIVTCMEMLEHVPDPASIIQACQKLVKPNGHVFFSTINRNPKSYLFAIVGAEYVLRLLK 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           KGTH +  F+ P EL   ++ + + +K+M G  YNPLT  + L+ ++ VN++ +
Sbjct: 178 KGTHDYHKFIKPSELAHDIRNSGLKLKDMTGLHYNPLTKHYWLAPNVDVNYMVY 231


>gi|398871470|ref|ZP_10626784.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM74]
 gi|398917335|ref|ZP_10658109.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM49]
 gi|398926465|ref|ZP_10662461.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM48]
 gi|398170732|gb|EJM58660.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM48]
 gi|398173029|gb|EJM60875.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM49]
 gi|398206026|gb|EJM92799.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM74]
          Length = 232

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEALA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|21363053|sp|Q8Y0Z5.2|UBIG_RALSO RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
          Length = 238

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 133/232 (57%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+ST             P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQST------------APLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 59  GCGGGILSESMARAGANVKGIDLSRKALRVADLHS-LEAGVAVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNPLTGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPLTGRYALTHDTSVNYL 229


>gi|398995406|ref|ZP_10698290.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM21]
 gi|398129998|gb|EJM19350.1| ubiquinone biosynthesis O-methyltransferase [Pseudomonas sp. GM21]
          Length = 232

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDYAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVN------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A+ GATV GID  E  + +A+LH  L+   + +EY   TAE L 
Sbjct: 50  KVLDVGCGGGILSEAMAQRGATVMGIDMGEAPLAVAQLH-QLESGVN-VEYRQITAEGLA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   +FD V   E++EHV DP+   ++   +    G    STINR+ +AY  AI+ AE+
Sbjct: 108 EEMPEQFDVVTCLEMLEHVPDPSSVIRACFRMVKPGGQVFFSTINRNPKAYLFAIVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           I+  LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 IMKLLPRGTHDFKKFIRPSELGAWSRMAGLTVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|113866813|ref|YP_725302.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia eutropha H16]
 gi|113525589|emb|CAJ91934.1| 2-Polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-ben zoquinol methylase
           [Ralstonia eutropha H16]
          Length = 252

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 130/231 (56%), Gaps = 13/231 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD E  +KPLH LNP RL +I                   G  +VDVG
Sbjct: 27  EIDKFSELAHRWWDPESEFKPLHELNPLRLRWIDGIAG------------LAGKRVVDVG 74

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+GATV GID   K +K+A LH+ L+   +              E    
Sbjct: 75  CGGGILSESMARLGATVRGIDLSTKALKVADLHS-LETGVAVTYEEIAAEALAAREPASV 133

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   E++EHV DPA   ++ + L    G    STINR+++AY  AI+ AE++L+ LP+
Sbjct: 134 DVVTCMEMLEHVPDPASIVQACATLVKPGGYVFFSTINRNLKAYLLAIVGAEYVLNMLPR 193

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH +  F+TP EL    ++A +D+ EM G  YNPL+  ++L  D  VN++
Sbjct: 194 GTHDYDKFITPSELARFARQARLDLVEMRGMTYNPLSQVYALGSDTDVNYM 244


>gi|375108461|ref|ZP_09754718.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alishewanella
           jeotgali KCTC 22429]
 gi|374571563|gb|EHR42689.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Alishewanella
           jeotgali KCTC 22429]
          Length = 242

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/253 (37%), Positives = 143/253 (56%), Gaps = 14/253 (5%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +N+       S++   E++KF+ IA  WWD EG +KPLH LNPTRL +I   L   F   
Sbjct: 1   MNSPDNFDKNSNVDQNEISKFNEIAARWWDPEGEFKPLHLLNPTRLGYISDQLGGLF--- 57

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                   G + +DVGCGGGIL+E +AR GA VTGID     + +ARLHA L+   + I+
Sbjct: 58  --------GRHTLDVGCGGGILAESMARAGAKVTGIDMAPDGLNVARLHA-LEAGVN-ID 107

Query: 213 YCCTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y  +TAE   E    +F+ V   E++EHV DPA   ++ + L       V STIN++ +A
Sbjct: 108 YQQSTAEDFAERHAGEFELVTCMEMLEHVPDPASVVRACAELAAPGATLVFSTINKTAKA 167

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y  AI+ AE++L  +P+GTHQ+  F+ P  L+  ++ A +++ +  G  +NPL   + L 
Sbjct: 168 YLFAIVGAEYLLKLVPRGTHQFDKFIRPSVLMRYIEDAGLELVDATGLHFNPLNNSFKLG 227

Query: 332 DDISVNFIAFGTK 344
             + VN+     K
Sbjct: 228 AGLDVNYFVVARK 240


>gi|383312921|ref|YP_005365722.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Candidatus
           Rickettsia amblyommii str. GAT-30V]
 gi|378931581|gb|AFC70090.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Candidatus
           Rickettsia amblyommii str. GAT-30V]
          Length = 289

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/284 (36%), Positives = 142/284 (50%), Gaps = 45/284 (15%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK---DPYSARPF 159
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+ +    P     F
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKPAYREEF 61

Query: 160 EG--------------------------------------LNIVDVGCGGGILSEPLARM 181
            G                                      L I+DVGCGGG+++ PLA  
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLEVEFEKTSNISKLEILDVGCGGGLIATPLAAQ 121

Query: 182 GATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVA 241
           G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV 
Sbjct: 122 GFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHVE 178

Query: 242 DPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEE 301
           +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P E
Sbjct: 179 NVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLE 238

Query: 302 LVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           +  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 IYEMLTDTEIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 282


>gi|118594963|ref|ZP_01552310.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophilales
           bacterium HTCC2181]
 gi|118440741|gb|EAV47368.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophilales
           bacterium HTCC2181]
          Length = 235

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 141/247 (57%), Gaps = 22/247 (8%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           NKK+  P+     E+ KF+ +A  WWD    +KPLH +NP R+ FI+S L          
Sbjct: 5   NKKNIDPT-----EVDKFNMLAHKWWDPTSEFKPLHEINPLRVNFIKSKLS--------- 50

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYC 214
               EG +I+DVGCGGGIL+E LA  GA VTGID  +K IKIA LH   + E+   I Y 
Sbjct: 51  ---LEGKSILDVGCGGGILAEALALEGAIVTGIDQGDKVIKIAELH---NKESKLNINYK 104

Query: 215 CTTAEKLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
               E   ++ + K+D +   E++EHV DP+   K+ + L   +G    ST+NR+ +++ 
Sbjct: 105 NMNIEDFFKKNKEKYDVITCLEMLEHVPDPSSIIKTCAQLLKPQGRIFFSTLNRNPKSFL 164

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AI+ AE+IL  LPKGTH +  F+TP EL        +   +M G  YNPLT  +SL+ D
Sbjct: 165 FAIVGAEYILKLLPKGTHTYEKFITPAELRSWSSEVGLQFYDMIGMTYNPLTKIYSLTKD 224

Query: 334 ISVNFIA 340
            SVN++ 
Sbjct: 225 CSVNYLV 231


>gi|114563302|ref|YP_750815.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella
           frigidimarina NCIMB 400]
 gi|114334595|gb|ABI71977.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella
           frigidimarina NCIMB 400]
          Length = 240

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 132/232 (56%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 15  EIAKFEAMAQTWWDLNGEFKPLHLLNPLRLNYIDQTADGIFDK-----------KVLDVG 63

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+GA V GID   + +++A+LHA       T+ Y  TTAE   +  R++
Sbjct: 64  CGGGILSESMARLGANVDGIDMGNEPLEVAKLHAL--ESGVTVNYLKTTAEAHRDNHREY 121

Query: 229 -DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
            D V   E++EHV DP    ++   +    G    STINR+M +Y   II AE++L  LP
Sbjct: 122 YDVVTCMEMLEHVPDPQSVIQACCDMVKPNGFVFFSTINRNMMSYLQTIIGAEYLLKMLP 181

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            GTH  S F+ P EL+ ++    +  K+  G  YNPL+G +  +  + VN++
Sbjct: 182 VGTHDHSKFIRPSELMALVDNTDLLCKDALGITYNPLSGVFKYTKSVDVNYM 233


>gi|407701682|ref|YP_006826469.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Alteromonas macleodii str. 'Black Sea 11']
 gi|407250829|gb|AFT80014.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas macleodii str. 'Black Sea 11']
          Length = 250

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 145/245 (59%), Gaps = 4/245 (1%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +  K +  S+    E+A+F A+AD+WWD +G YK     N  RL  I++ +  HF K   
Sbjct: 3   DKSKKTGGSNFSEQEIARFDALADSWWDPKGKYKTALDFNRARLNVIKAQIENHFGKGNL 62

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
               +  L+++D+G GGG++SEPLA++GA VTGIDA   ++++A+ HA+       ++Y 
Sbjct: 63  PPD-YSALSVIDIGSGGGLISEPLAKLGAQVTGIDASAVSVEVAKRHAE--KTGVKVDYQ 119

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              + ++VEE R++D VI +EV+EHV D     +  ++L    G  +++T+NR++++Y  
Sbjct: 120 HKLSSEVVEEGRQYDVVINAEVVEHVPDQPLLIRECASLVKPGGLLILATLNRTLKSYIV 179

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE+++ +LP GTH W  F+ P EL   +      +    G   NPL G+W  +  +
Sbjct: 180 AIVGAEYVMRYLPIGTHDWKKFVKPGELTSWVGN-DFTLTHQVGMRLNPLKGQWLTTSSL 238

Query: 335 SVNFI 339
           +VN+I
Sbjct: 239 AVNYI 243


>gi|145298928|ref|YP_001141769.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|418361081|ref|ZP_12961738.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas salmonicida
           subsp. salmonicida 01-B526]
 gi|166234758|sp|A4SM99.1|UBIG_AERS4 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|142851700|gb|ABO90021.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|356687666|gb|EHI52246.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas salmonicida
           subsp. salmonicida 01-B526]
          Length = 238

 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 141/233 (60%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F           G  I+D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF-----------GKRILDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   ++Y   TAE+   +   +
Sbjct: 60  CGGGILSESMARRGAHVTGIDMGKEPLGVARLHA-LE-QGVELQYQQMTAEEHASQTPDQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++++ L    G   ISTINR+ +AY   II AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLRAIATLVRPGGRVFISTINRNPKAYLMMIIGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH    F+TP EL  + + A + V++M+G  Y PL+ ++ L  ++ VN++ 
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLSNQFKLGKNVDVNYMV 230


>gi|387126836|ref|YP_006295441.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga sp. JAM1]
 gi|386273898|gb|AFI83796.1| 3-demethylubiquinone-9 3-methyltransferase [Methylophaga sp. JAM1]
          Length = 233

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/244 (41%), Positives = 142/244 (58%), Gaps = 19/244 (7%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           KKH+    +  AE+AKF A+A +WWD EG  KPLH +NP RLAFI        R    +A
Sbjct: 2   KKHN----VDPAEVAKFDALASSWWDPEGQSKPLHEINPLRLAFINE------RAQLKNA 51

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCT 216
           +       VDVGCGGGIL+E L + GA   GID  E  + +A+LHA L+     I+Y  T
Sbjct: 52  KA------VDVGCGGGILTEALVKSGAETVGIDMGEMPLNVAKLHA-LEAGLK-IKYELT 103

Query: 217 TAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           TAE + E+   +FD V   E++EHV DP     + + +    G    ST+NR+ +AY  A
Sbjct: 104 TAEAMAEKHPDEFDVVTCMEMLEHVPDPQAIINACATMAKPGGDVFFSTLNRNPKAYLLA 163

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
           I+ AE+I   LPKGTH ++ F+ P EL    + A + V ++ G  YNPLT R+ L+ D+ 
Sbjct: 164 IVGAEYIAKMLPKGTHDYARFIRPAELARCCREAGLHVYDITGISYNPLTRRYKLNRDVD 223

Query: 336 VNFI 339
           VN++
Sbjct: 224 VNYL 227


>gi|333984631|ref|YP_004513841.1| 3-demethylubiquinone-9 3-methyltransferase [Methylomonas methanica
           MC09]
 gi|333808672|gb|AEG01342.1| 3-demethylubiquinone-9 3-methyltransferase [Methylomonas methanica
           MC09]
          Length = 235

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 139/243 (57%), Gaps = 17/243 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A  ++   E+ KF + A+ WWD  G +K LH +NP RL FI+      F + P      
Sbjct: 2   TATDNVHPQEIHKFGSRAEHWWDPNGEFKTLHDVNPLRLRFIQQ-----FAELP------ 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTA 218
            G  +VDVGCGGGIL+E LA+ GA V GID  E  I IA LH     ET     Y   +A
Sbjct: 51  -GKRLVDVGCGGGILTEGLAKAGADVLGIDLSEDLIDIADLHG---LETGINAHYQKISA 106

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E L E+Q   FD V   E++EHV DPA   ++ + L    G    ST+NR  +AY  AI+
Sbjct: 107 ESLAEQQPAGFDHVTCMEMLEHVPDPASIIRACATLVKPGGMVFFSTLNRVPKAYLLAIL 166

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
           AAEHIL  LP+GTH + +F+ P EL    + A ++++ M G  YNP + ++SL  DI VN
Sbjct: 167 AAEHILKMLPQGTHDYKTFIKPSELCQSARNAGLELQGMTGIEYNPFSKKFSLGKDIGVN 226

Query: 338 FIA 340
           +IA
Sbjct: 227 YIA 229


>gi|325982083|ref|YP_004294485.1| ubiquinone biosynthesis O-methyltransferase [Nitrosomonas sp.
           AL212]
 gi|325531602|gb|ADZ26323.1| ubiquinone biosynthesis O-methyltransferase [Nitrosomonas sp.
           AL212]
          Length = 235

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/232 (40%), Positives = 136/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD    +KPLH +NP RL +I                   G  I+DVG
Sbjct: 12  ELEKFSQLAHRWWDPHSEFKPLHEINPLRLNYINDL-----------TNGLMGKTILDVG 60

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +A MGA VTGID  +K +K+A+LH  L      ++Y   T E L +E+ + 
Sbjct: 61  CGGGILSEGMASMGAHVTGIDLSDKALKVAKLH--LLESGYDVDYRKITVESLAQEKPQH 118

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    ++ + L    G    STINR+ ++Y  AII AE+IL+ LP
Sbjct: 119 YDIVTCMEMLEHVPDPMSVIRACTELAKPNGWVFFSTINRNPKSYLFAIIGAEYILNLLP 178

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH+++ F+ P EL  + + A +  +++ G  YNP+T  ++L +D  VN+I
Sbjct: 179 RGTHEYAKFIKPSELARMARNAGLTDEKLIGMTYNPITKIYALEEDTDVNYI 230


>gi|300312991|ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyltransferase [Herbaspirillum
           seropedicae SmR1]
 gi|300075776|gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 241

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD    ++PLH +NP RL +I +              P  G  ++D+G
Sbjct: 17  EIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINAR------------APLAGKKVIDIG 64

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV-EEQRK 227
           CGGGIL+E +A  G  VTGID  +K +K+A LH+        + Y    AE +   E  +
Sbjct: 65  CGGGILAESMALKGGDVTGIDLSDKALKVADLHSM--ESGVQVRYEKIAAEDMAAREAGQ 122

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++ + L    G    ST+NR+M++Y  AII AE++L  LP
Sbjct: 123 YDVVTCMEMLEHVPDPAAIVRAAATLAKPGGKLFFSTLNRNMKSYLMAIIGAEYVLRLLP 182

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH ++ F+TP EL    ++A + +    G  YNPLT  +SL+DD SVN++   TK
Sbjct: 183 KGTHDYAKFITPAELAHYTRQADLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 239


>gi|255021228|ref|ZP_05293278.1| 3-demethylubiquinone-9 3-methyltransferase [Acidithiobacillus
           caldus ATCC 51756]
 gi|340782079|ref|YP_004748686.1| 3-demethylubiquinone-9 3-methyltransferase [Acidithiobacillus
           caldus SM-1]
 gi|254969343|gb|EET26855.1| 3-demethylubiquinone-9 3-methyltransferase [Acidithiobacillus
           caldus ATCC 51756]
 gi|340556232|gb|AEK57986.1| 3-demethylubiquinone-9 3-methyltransferase [Acidithiobacillus
           caldus SM-1]
          Length = 239

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 133/234 (56%), Gaps = 13/234 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF A+A  WWD +GP + LH +NP RL FIR                 EGL +VDVG
Sbjct: 7   EIEKFGAMAQDWWDDKGPLRTLHQINPVRLEFIRRG----------CGGRLEGLRVVDVG 56

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPE--TSTIEYCCTTAEKLVEEQR 226
           CG GILSE +AR GA V G+D  E  +  AR HA+   +  + T+EY     E L  E  
Sbjct: 57  CGAGILSEAMARAGAKVLGVDLAESALAAARKHAEQGDQDLSKTLEYRAIAVEDLAAEAA 116

Query: 227 -KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             FD V   E++EHV +P    ++ + L    G    +TINR+ ++Y  AI+ AE++L  
Sbjct: 117 GSFDVVTCMEMLEHVPEPQSVVRACAKLLRPGGQVFFATINRNPKSYLLAILGAEYVLGL 176

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +P+GTH +   + P EL+ + + A + ++E+ G  Y+P+ GR  L DD+SVN++
Sbjct: 177 IPRGTHDYEKLIRPSELLDMARTAGLQLEELKGMHYDPIRGRARLVDDVSVNYL 230


>gi|262374492|ref|ZP_06067766.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter junii
           SH205]
 gi|262310488|gb|EEY91578.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter junii
           SH205]
          Length = 237

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 134/236 (56%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L  EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVKNIEYRQIPVEQLALEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   K+  +L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVKACQSLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLSLKEMIGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|194288902|ref|YP_002004809.1| 3-demethylubiquinone-9 3-methyltransferase [Cupriavidus taiwanensis
           LMG 19424]
 gi|193222737|emb|CAQ68740.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 250

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/231 (41%), Positives = 132/231 (57%), Gaps = 13/231 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD +  +KPLH LNP RL +I          D  +A    G  +VDVG
Sbjct: 25  EIDKFSELAHRWWDPQSEFKPLHELNPLRLGWI----------DGIAA--LAGKRVVDVG 72

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+GATV GID   K +K+A LH+ L+   +              E    
Sbjct: 73  CGGGILSESMARLGATVRGIDLSSKALKVADLHS-LESGVAVTYEEIAAEALAAREPASV 131

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   E++EHV DPA    + + L    G    STINR+++AY  AI+ AE++L+ LP+
Sbjct: 132 DVVTCMEMLEHVPDPASIVHACATLVRPGGHVFFSTINRNLKAYLLAIVGAEYVLNMLPR 191

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH +  F+TP EL    ++A +D+ EM G  YNPL+  ++L  D  VN++
Sbjct: 192 GTHDYEKFITPAELARFARQAGLDLIEMRGMTYNPLSQVYTLGRDTDVNYL 242


>gi|347759794|ref|YP_004867355.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           xylinus NBRC 3288]
 gi|347578764|dbj|BAK82985.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconacetobacter
           xylinus NBRC 3288]
          Length = 255

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/252 (41%), Positives = 141/252 (55%), Gaps = 15/252 (5%)

Query: 94  NNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDP 153
           N++    +  S+   E+A FS++A  WWD  GP +PLHA+N  R  +      RH    P
Sbjct: 9   NHDSPVVSADSVAPEEIAHFSSLAARWWDTAGPMRPLHAMNDLRTGWS----MRHL-PAP 63

Query: 154 YSARPFEGL--NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP---ET 208
             A   +G    ++D+GCG G+ SE  AR G  VTG+DA +  I   RLH    P     
Sbjct: 64  VGA---DGTRRTLLDIGCGAGLASEAFARAGYDVTGLDASQAAITAGRLHLRQHPLLASA 120

Query: 209 STIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
             + Y C +AE LV E  +FDA+ A EVIEHV DPA F + L+ L    G  V+ST+NR+
Sbjct: 121 GPLAYRCASAETLVAEGARFDAISALEVIEHVTDPAAFLRMLAELLRPGGVMVVSTMNRT 180

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
            R+ A A I AE++L  LP GTH W  F+TP EL     +A + V ++AG V  P  G W
Sbjct: 181 WRSMAMAKIGAEYVLRLLPVGTHDWRKFITPAELGQHAAQAGLRVTDIAGMV--PTLGGW 238

Query: 329 SLSDDISVNFIA 340
             S D++VN+IA
Sbjct: 239 RESRDLAVNYIA 250


>gi|269102945|ref|ZP_06155642.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268162843|gb|EEZ41339.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 236

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 137/240 (57%), Gaps = 16/240 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE++KF  +A  WWD EG +KPLH +NP RL F+              A    G  ++DV
Sbjct: 10  AEISKFEDMASRWWDPEGEFKPLHQINPLRLNFVID-----------KADGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQ- 225
           GCGGGIL+E +A  GA VTG+D  ++ + +ARLHA    ET   +EY   TAE+  EE  
Sbjct: 59  GCGGGILAESMAVEGADVTGLDMGKEPLTVARLHA---LETGVKLEYVQATAEEHAEENP 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
           + +D V   E++EHV DPA    + + +    G    ST+NR++++Y  AI+ AEH+L  
Sbjct: 116 QAYDVVTCMEMLEHVPDPASVIAACAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEHLLKI 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           +PKGTH    F+ P E++ ++ R  +  K + G  YNPLT  + L  ++ VN+I    K 
Sbjct: 176 VPKGTHHHEKFIRPSEMMAMIDRTELQDKHITGLHYNPLTNTYRLGTNVDVNYIVHTIKQ 235


>gi|24373960|ref|NP_718003.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase UbiG [Shewanella oneidensis MR-1]
 gi|39932530|sp|Q8EEG9.1|UBIG_SHEON RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|24348402|gb|AAN55447.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase UbiG [Shewanella oneidensis MR-1]
          Length = 236

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 136/233 (58%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKLVEEQRK 227
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA    ET  +I Y   TAE   E+ R+
Sbjct: 60  CGGGILSESMARIGAIVDGLDMGEEPLEVARLHA---LETGVSINYVKNTAEAHREDHRE 116

Query: 228 F-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           + D V   E++EHV DP    ++   +    G    STINR++R++   II AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPDPQSVIQACCDMVKPGGFVFFSTINRNVRSFVETIIGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 177 PIGTHDHNKFIKPSELIDLVDNTELICKDALGITYNPLTGIFKYTSKVDVNYM 229


>gi|114332454|ref|YP_748676.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas eutropha
           C91]
 gi|114309468|gb|ABI60711.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas eutropha
           C91]
          Length = 252

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 147/261 (56%), Gaps = 21/261 (8%)

Query: 80  VSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLA 139
           VS  +N   N+  + N+  ++ P      EL KFS +A  WWD    +KPLH +NP RL 
Sbjct: 7   VSFQLNLQANYC-MKNDGINADP-----MELEKFSQLAHHWWDPNSEFKPLHEINPLRLN 60

Query: 140 FIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIAR 199
           +I                  +G  +VDVGCGGGILSE +A  GA VTGID  +K +K+A+
Sbjct: 61  YIDEI------------AGLDGKTVVDVGCGGGILSESMAARGARVTGIDLSDKALKVAK 108

Query: 200 LHADLDPETSTIEYCCTTAEKL-VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEG 258
           LH  L      ++Y   T E L VE  + +D V   E++EHV DPA   +S + L  + G
Sbjct: 109 LH--LLESGHQVDYRKITVEALAVELPQHYDIVTCMEMLEHVPDPASVIQSCARLVKNGG 166

Query: 259 ATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAG 318
               ST+NR+++AY  AII AE+IL  LP+GTH+++ F+ P EL  + + A +    + G
Sbjct: 167 WVFFSTLNRNLKAYLYAIIGAEYILRLLPRGTHEYAKFIKPSELARMARTAGLIESGIIG 226

Query: 319 FVYNPLTGRWSLSDDISVNFI 339
             YNP+T  ++L  D SVN+I
Sbjct: 227 MTYNPITKIYALEADTSVNYI 247


>gi|313219475|emb|CBY30399.1| unnamed protein product [Oikopleura dioica]
          Length = 269

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 133/240 (55%), Gaps = 2/240 (0%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A  +L H E+ KF A+   WWD  G   PLH+LN  R+ ++R  L +     P +  P  
Sbjct: 22  AAGTLNHKEVEKFGAMNGDWWDQNGQNSPLHSLNKLRVGYVRDLLSKTSPNSP-AGLPLF 80

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK 220
              I+DVGCGGGIL+E LA++GA VT +DA E  I +A            + Y     E 
Sbjct: 81  SKTILDVGCGGGILAEGLAQLGADVTAVDASEDLISVAEERRK-RKGIENLTYLDVLVED 139

Query: 221 LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
           L E   +FD VI+SEV+EHV +P  F    S L   +G  + +TINR++++   AI  AE
Sbjct: 140 LQEIDTRFDLVISSEVLEHVEEPWAFVAYCSNLVKQDGDLIFTTINRTIQSRILAIELAE 199

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            I   LP+GTH W  F+T EEL++ L+     V+++ G  +NP T  WS S+ + VN++ 
Sbjct: 200 RIAGLLPRGTHDWEKFVTVEELIMDLREVKFRVEDIKGMSWNPFTNEWSWSNSLDVNYLV 259


>gi|157961887|ref|YP_001501921.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella pealeana
           ATCC 700345]
 gi|189037628|sp|A8H499.1|UBIG_SHEPA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|157846887|gb|ABV87386.1| ubiquinone biosynthesis O-methyltransferase [Shewanella pealeana
           ATCC 700345]
          Length = 236

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 138/240 (57%), Gaps = 16/240 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A TWWD +G +KPLH LNP RL +I  T    F           G  ++DVG
Sbjct: 11  EIAKFEKMAATWWDPKGEFKPLHNLNPLRLNYIDQTAGGIF-----------GKQVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQR- 226
           CGGGILSE +AR+GA VTG+D  ++ + +ARLHA    ET   I Y   TAE   +E R 
Sbjct: 60  CGGGILSESMARIGANVTGLDMGDEPLDVARLHA---LETGVEINYIKNTAEAHRDEHRG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV +P+   ++ + +    G    STINR++RAY   I+ AE++L  L
Sbjct: 117 QYDVVTCMEMLEHVPNPSSVIQACADMVKPGGYVFFSTINRNLRAYVETILGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           P GTH  + F+ P EL+ +   A +  K+  G  YNP+T  +  +  + VN++    KN 
Sbjct: 177 PIGTHDHNKFIRPSELIDLADNAELFCKDAVGITYNPITDIFRYTKSLEVNYMIATVKND 236


>gi|229586971|ref|YP_002845472.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia africae
           ESF-5]
 gi|228022021|gb|ACP53729.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia africae
           ESF-5]
          Length = 289

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEL 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|212556768|gb|ACJ29222.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella
           piezotolerans WP3]
          Length = 256

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 137/239 (57%), Gaps = 14/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A TWWD  G +KPLH LNP RL +I  T    F           G  ++DVG
Sbjct: 31  EIAKFEKMAATWWDPNGEFKPLHNLNPLRLNYIDQTAGGIF-----------GKKVLDVG 79

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK- 227
           CGGGILSE +AR+GA VTG+D  E+ + +ARLHA L+   S I Y   TAE   +E ++ 
Sbjct: 80  CGGGILSESMARIGADVTGLDMGEEPLDVARLHA-LETGVS-INYIKNTAENHRDEHKQQ 137

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D +   E++EHV DP+   ++ + +    G    STINR++RAY   I+ AE++L  LP
Sbjct: 138 YDVITCMEMLEHVPDPSSVIQACADMVKPGGYVFFSTINRNIRAYVETILGAEYLLKMLP 197

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
            GTH  + F+ P EL+ +   A +   +  G  YNP+T  +  +  + VN++    KN 
Sbjct: 198 VGTHDHNKFIRPSELIGLADNAELICNDAVGITYNPITDVFKYTKSLEVNYMIATIKND 256


>gi|422616816|ref|ZP_16685521.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. japonica str. M301072]
 gi|330897201|gb|EGH28620.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. japonica str. M301072]
          Length = 232

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GA VTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGARVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   ++D V   E++EHV DP+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQYDVVTCLEMLEHVPDPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225


>gi|167855143|ref|ZP_02477915.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           29755]
 gi|219870736|ref|YP_002475111.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           SH0165]
 gi|254789990|sp|B8F4B1.1|UBIG_HAEPS RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|167853778|gb|EDS25020.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           29755]
 gi|219690940|gb|ACL32163.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 236

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 135/243 (55%), Gaps = 18/243 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KF  +A TWWD +G +KP+H LNP RLA+I                   G 
Sbjct: 2   NNIDQQEVEKFEKMAKTWWDPQGDFKPIHLLNPLRLAYIND-----------KTNGLFGK 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE +A +GA VTGID     + +AR HA+       I Y   T E  +
Sbjct: 51  KVLDIGCGGGILSESMAGLGAIVTGIDMAADALLVARQHAE--SNHLNICYQQITVEDFL 108

Query: 223 EEQ-----RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           ++       KFD +   EV+EHV +P    +S   L   +G   ISTINR+ +AY   II
Sbjct: 109 KQHCITDTEKFDIITCMEVLEHVPNPHSIIQSCKNLLKEDGLLFISTINRTAKAYMLIII 168

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LPKGTH +  F+ P EL+    +   + KE+ G+ +NPLT  + ++ DI+ N
Sbjct: 169 GAEYVLKMLPKGTHNFEKFIKPSELLRWCSQEDFECKEIVGYHFNPLTKNFWINKDINCN 228

Query: 338 FIA 340
           +IA
Sbjct: 229 YIA 231


>gi|334705036|ref|ZP_08520902.1| ubiquinone biosynthesis O-methyltransferase [Aeromonas caviae
           Ae398]
          Length = 238

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 15/235 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F           G  ++D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF-----------GKRVLDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE-QRK 227
           CGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   +EY   TAE   +E   +
Sbjct: 60  CGGGILSESMARRGARVTGIDMGKEPLGVARLHA-LE-QGVELEYRQITAEAHADEVPGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++++ L    G   +STINR+ +AY   I+ AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLRAIATLVRPGGKVFVSTINRNPKAYLMMILGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF-IAF 341
           KGTH    F+TP EL  + + A + V++M+G  Y PL+  + L  ++ VN+ +AF
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLSNSFKLGKNVDVNYMVAF 232


>gi|341584149|ref|YP_004764640.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           heilongjiangensis 054]
 gi|340808374|gb|AEK74962.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           heilongjiangensis 054]
          Length = 289

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 145/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFSILHRINPIRLEYIIEKITTHYNRHLSKLAYREEL 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYIEVREDASSRLTHKLPIEVECEKMSNNISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L  + + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEELASD-KLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P+   W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPVKNEWKLSDDIDVNYFMCLGRK 283


>gi|407687889|ref|YP_006803062.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'Balearic Sea AD45']
 gi|407291269|gb|AFT95581.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'Balearic Sea AD45']
          Length = 234

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 15/241 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WWD EG +KPLH +NP RL FI       F K           
Sbjct: 2   TNVDQQEINKFSELASRWWDPEGEFKPLHLINPLRLDFINQHSEGLFDK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            +VD+GCGGGIL+E +AR GATVTG+D  E ++++A+LH  L+     ++Y C+TAE   
Sbjct: 51  KVVDIGCGGGILAESMARAGATVTGLDMAEASLEVAKLHG-LESGVK-VDYVCSTAEAFA 108

Query: 223 EEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E    +FD V   E++EHV DPA    + + L    G    ST+NR++++Y   I+ AE+
Sbjct: 109 EANAGQFDVVTCMEMLEHVPDPASVVMACAKLVKPGGHVFFSTLNRNLKSYLMGIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIA 340
           IL  +PKGTH  S F+ P EL+ +   A +  ++M G   +P++  + LS +++ VN++ 
Sbjct: 169 ILKLVPKGTHDHSKFIKPSELMAMTDHAGLLPRDMTGLHMDPISQGFYLSANNVDVNYLL 228

Query: 341 F 341
           +
Sbjct: 229 Y 229


>gi|381151396|ref|ZP_09863265.1| ubiquinone biosynthesis O-methyltransferase [Methylomicrobium album
           BG8]
 gi|380883368|gb|EIC29245.1| ubiquinone biosynthesis O-methyltransferase [Methylomicrobium album
           BG8]
          Length = 235

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 138/242 (57%), Gaps = 15/242 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           +A +++   E+ KF + A+ WWD +G  K LH +NP RL FIR  +              
Sbjct: 2   TASNNVHPHEINKFGSQAERWWDPQGELKTLHDINPLRLQFIRRFI------------DL 49

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           +G  IVDVGCGGGIL+E LA+ GA   GID   + + IA LH  L+    T +Y   +AE
Sbjct: 50  KGARIVDVGCGGGILTEGLAKEGADALGIDLSAELLDIADLHG-LESGIPT-QYRKISAE 107

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
            L  EQ   FD V   E++EHV DP     + + L    G    ST+NR  +AY  AI+A
Sbjct: 108 DLAAEQPAGFDHVTCMEMLEHVPDPGAIINACATLVKPGGMVFFSTLNRKPKAYLLAIVA 167

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AEH+L  LPKGTH++ +F+ P EL    + A + +  + G  YNPLT R+SL +DI VN+
Sbjct: 168 AEHVLKMLPKGTHEYKTFIKPSELCQSARNAGLQLSGVVGIEYNPLTQRFSLGNDIDVNY 227

Query: 339 IA 340
           IA
Sbjct: 228 IA 229


>gi|415941473|ref|ZP_11555774.1| 3-demethylubiquinone-9 3-methyltransferase [Herbaspirillum
           frisingense GSF30]
 gi|407759028|gb|EKF68779.1| 3-demethylubiquinone-9 3-methyltransferase [Herbaspirillum
           frisingense GSF30]
          Length = 241

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 140/253 (55%), Gaps = 15/253 (5%)

Query: 93  LNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD 152
           +N     +A  +    E+ KFS +A  WWD    ++PLH +NP RL +I +         
Sbjct: 1   MNTTNATNATMNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINAR-------- 52

Query: 153 PYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE 212
                P  G  ++D+GCGGGIL+E +A  GA VTGID  +K +K+A LH+        + 
Sbjct: 53  ----APLAGKKVIDIGCGGGILAESMAIKGADVTGIDLSDKALKVADLHSM--ESGVQVR 106

Query: 213 YCCTTAEKLV-EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
           Y    AE +   E  ++D V   E++EHV DPA   ++ + L    G    ST+NR+M++
Sbjct: 107 YEKIAAEDMAAREAGQYDVVTCMEMLEHVPDPAAIVRAAATLAKPGGKLFFSTLNRNMKS 166

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS 331
           Y  AII AE++L  LPKGTH ++ F+TP EL    + A + +    G  YNPLT  +SL+
Sbjct: 167 YLMAIIGAEYVLRLLPKGTHDYAKFITPAELARYTREADLQIDAFKGMGYNPLTKIYSLN 226

Query: 332 DDISVNFIAFGTK 344
           +D SVN++   TK
Sbjct: 227 EDTSVNYLVACTK 239


>gi|421888911|ref|ZP_16319986.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum K60-1]
 gi|378965733|emb|CCF96734.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum K60-1]
          Length = 239

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S +            P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSVV------------PLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH  L+   +              E   
Sbjct: 59  GCGGGILSESMARAGADVKGIDLSRKALRVADLHG-LEAGVAVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ +AL    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDIVTCMEMLEHVPDPASVVRACAALVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNP+TGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPITGRYALTHDTSVNYL 229


>gi|34581410|ref|ZP_00142890.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia sibirica
           246]
 gi|28262795|gb|EAA26299.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia sibirica
           246]
          Length = 289

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEL 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKITYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|254447085|ref|ZP_05060552.1| 3-demethylubiquinone-9 3-O-methyltransferase [gamma proteobacterium
           HTCC5015]
 gi|198263224|gb|EDY87502.1| 3-demethylubiquinone-9 3-O-methyltransferase [gamma proteobacterium
           HTCC5015]
          Length = 234

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 143/238 (60%), Gaps = 14/238 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   E+ KFSAIA+ WWD  G +KPLH +NP RL +I+S  C   +          GL
Sbjct: 2   SNVDPVEIQKFSAIAERWWDKNGEFKPLHDINPLRLDYIQSR-CGDLK----------GL 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGIL++ +A  GA VTG+D   + +K A+ HAD       +EY     E L 
Sbjct: 51  RVLDVGCGGGILAQSMAERGAEVTGLDLSREALKAAQQHAD--DSGVQLEYIEQAVEDLA 108

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E+  ++D V   E++EHV DP    ++ + L    G  V+ST+NR+ +++  AI+ AE+
Sbjct: 109 AERAEQYDVVTCMEMLEHVPDPESVIRACAQLVKPGGDVVMSTLNRNPKSFLFAIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L+ +P+GTH+++ F+ P EL    + A +D +   G  YNP+T  + L+D++ VN++
Sbjct: 169 VLNLVPRGTHEYAKFIRPSELSRWARNAELDTQHTTGLHYNPVTKHYWLADNVDVNYL 226


>gi|350273710|ref|YP_004885023.1| ubiquinone biosynthesis O-methyltransferase [Rickettsia japonica
           YH]
 gi|348592923|dbj|BAK96884.1| ubiquinone biosynthesis O-methyltransferase [Rickettsia japonica
           YH]
          Length = 289

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 145/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFSILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYIAVREDASSRLKHKLPIEVECEKMSNNISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L  + + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEELASD-KLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P+   W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPVKNEWKLSDDIDVNYFMCLGRK 283


>gi|308049655|ref|YP_003913221.1| 3-demethylubiquinone-9 3-methyltransferase [Ferrimonas balearica
           DSM 9799]
 gi|307631845|gb|ADN76147.1| 3-demethylubiquinone-9 3-methyltransferase [Ferrimonas balearica
           DSM 9799]
          Length = 237

 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 143/238 (60%), Gaps = 14/238 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+AKF  +A TWWD EG   PLH +NP RLA+I     RH       A    G  +VDV
Sbjct: 10  SEVAKFEQLAATWWDPEGHSGPLHKMNPLRLAYIE----RH-------ADGLFGKKVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEK-LVEEQR 226
           GCGGG+LSE +AR+GA VTG+D  E+ +++ARLHA L+     ++Y   TAE+   +   
Sbjct: 59  GCGGGLLSEAMARVGAKVTGLDMGEEPLEVARLHA-LESGVD-VDYLQATAEQHAADYAG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++  V   E+IEHV DP    ++ + L    G   +STIN++  AY T I+ AE +L  L
Sbjct: 117 QYQVVTCMEMIEHVPDPGSVIRACADLVAPGGHLYLSTINKTPLAYLTTIVGAEQLLKVL 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH ++ +L P +LV   ++A + V+   G  YNPLT  +S+++ ++VN++    K
Sbjct: 177 PKGTHDYNKYLRPSQLVAWCEQAGLKVRHADGVRYNPLTQTFSMTESMAVNYMIHAYK 234


>gi|285018687|ref|YP_003376398.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (dhhb methyltransferase) protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473905|emb|CBA16406.1| probable 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (dhhb methyltransferase) protein [Xanthomonas
           albilineans GPE PC73]
          Length = 246

 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 139/246 (56%), Gaps = 17/246 (6%)

Query: 101 APSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFE 160
           A ++   AEL KF A+A  WWDA+GP KPLH LNP RL ++   +            P  
Sbjct: 8   ASANFDQAELDKFGALATRWWDADGPQKPLHVLNPVRLRYVAERV------------PLR 55

Query: 161 GLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAE 219
           G  ++DVGCGGG+LSE LA+ GA VT ID   + IK+ARLH     E++  ++Y   + E
Sbjct: 56  GATVLDVGCGGGLLSEALAKEGAQVTAIDLAPELIKVARLHRF---ESAVEVDYRVQSVE 112

Query: 220 KLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           +L   Q   FDA+   E++EHV DPA    + + L    G   +ST+NR+  A+A AI+ 
Sbjct: 113 ELAATQPASFDAITCMEMLEHVPDPAAIVAACARLLKPGGQLFLSTLNRTPAAFALAIVG 172

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++   LP GTH++  F+ P EL   L++  + ++++ G  Y P   R  LS    VN+
Sbjct: 173 AEYVARLLPAGTHRYQDFIKPAELAAWLRQVQLQLRDVTGLRYEPWRNRARLSTRTEVNY 232

Query: 339 IAFGTK 344
           +A   K
Sbjct: 233 LACAVK 238


>gi|83647053|ref|YP_435488.1| 3-demethylubiquinone-9 3-methyltransferase [Hahella chejuensis KCTC
           2396]
 gi|109895671|sp|Q2SE61.1|UBIG_HAHCH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|83635096|gb|ABC31063.1| ubiquinone biosynthesis O-methyltransferase [Hahella chejuensis
           KCTC 2396]
          Length = 238

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 132/237 (55%), Gaps = 13/237 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+ KF  +A  WWDAE  +KPLH +NP RL FI          D  +A P  G  ++DV
Sbjct: 10  SEVKKFEDLAHRWWDAESEFKPLHEINPLRLDFI----------DERAALP--GKRVLDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID  E  + +ARLH  L+   S      T  E    E   
Sbjct: 58  GCGGGILSESMARRGAHVVGIDMGEAPLSVARLHG-LESGVSVDYRRTTIEELAEAEAES 116

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA    + + +         STINR+ +++  AI+ AE++L  LP
Sbjct: 117 FDVVTCMEMLEHVPDPASVIAACARVAKPGADLFFSTINRNPKSFLFAIVGAEYVLKMLP 176

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTH+W  F+ P EL   L+ A +D+ EM G  YNPL   + L DD+ VN++    K
Sbjct: 177 RGTHEWKKFIKPSELAAWLRSADLDLCEMRGMTYNPLLKEYKLGDDVDVNYLMHAVK 233


>gi|374319566|ref|YP_005066065.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia slovaca
           13-B]
 gi|383751600|ref|YP_005426701.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           slovaca str. D-CWPP]
 gi|360042115|gb|AEV92497.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia slovaca
           13-B]
 gi|379774614|gb|AFD19970.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           slovaca str. D-CWPP]
          Length = 289

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/285 (37%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEL 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDTSSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNDWKLSDDIDVNYFMCLGRK 283


>gi|15892888|ref|NP_360602.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia conorii str.
           Malish 7]
 gi|21363062|sp|Q92H07.1|UBIG_RICCN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|15620077|gb|AAL03503.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia conorii str.
           Malish 7]
          Length = 289

 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLTYREEL 61

Query: 150 --------------RKDPYS----ARPFEG-----------LNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLTHKLPLEAEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L +  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-DSDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|407683985|ref|YP_006799159.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'English Channel 673']
 gi|407245596|gb|AFT74782.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'English Channel 673']
          Length = 234

 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 143/246 (58%), Gaps = 15/246 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WWD EG +KPLH +NP RL FI       F K           
Sbjct: 2   TNVDQQEINKFSELASRWWDPEGEFKPLHLINPLRLDFINQHSEGLFDK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            +VD+GCGGGIL+E +AR GATVTG+D  E ++++A+LH  L+     ++Y C+TAE   
Sbjct: 51  KVVDIGCGGGILAESMARAGATVTGLDMAEASLEVAKLHG-LESGVK-VDYVCSTAEAFA 108

Query: 223 EEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E    +FD V   E++EHV DPA    + + L    G    ST+NR++++Y   I+ AE+
Sbjct: 109 EANAGQFDVVTCMEMLEHVPDPASVVLACAKLVKPGGHVFFSTLNRNLKSYLMGIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIA 340
           IL  +PKGTH  S F+ P EL+ +   A +  ++M G   +P++  + LS +++ VN++ 
Sbjct: 169 ILKLVPKGTHDHSKFIKPSELMAMTDHAGLLPRDMTGLHMDPISQGFYLSANNVDVNYLL 228

Query: 341 FGTKNS 346
           +    S
Sbjct: 229 YTVAQS 234


>gi|355680646|gb|AER96593.1| coenzyme Q3-like protein, methyltransferase [Mustela putorius furo]
          Length = 303

 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 135/220 (61%), Gaps = 3/220 (1%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++ +++  +E+  F A+A  WWD +G Y PLH++N  R+ FIR  L +         +P 
Sbjct: 85  TSQTTVDSSEIKTFVALAHRWWDEQGVYAPLHSMNDLRVPFIRDNLLKTVAHHQ-PGKPL 143

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTA 218
            G+ I+DVGCGGG+L+EPL R+GA+V GID V++NIK A+ H   DP     IEY   + 
Sbjct: 144 SGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQHHKSFDPVLEKRIEYRACSL 203

Query: 219 EKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E++VEE    FDAV+ASEVIEHV D   F +    +    G+  I+T+N++  +YA  I+
Sbjct: 204 EEIVEETAETFDAVVASEVIEHVIDLETFIQCCYQVLKFGGSLFITTVNKTQLSYALGIV 263

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMA 317
            +E I   +PKGTH W  F++PE+L  IL+   + V  +A
Sbjct: 264 FSEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVHTVA 303


>gi|321453646|gb|EFX64862.1| hypothetical protein DAPPUDRAFT_204530 [Daphnia pulex]
          Length = 266

 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 142/254 (55%), Gaps = 15/254 (5%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR-- 157
           S  S++  +E+ KFS +A  WWD  GP K +H+LN  R  F    +    +    +AR  
Sbjct: 17  SLKSTVNVSEVQKFSGMASEWWDVNGPLKAIHSLNKLRTPFFEQGIRSRQKSTVANARQA 76

Query: 158 -PFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA------DLDPETST 210
            P  G  ++DVGCG GIL+E L R+GA VTGID  E+NI++A  HA      ++  E +T
Sbjct: 77  FPLAGFKVLDVGCGAGILTESLGRLGAEVTGIDPSEENIEVAYRHAKRINLRNVAYEANT 136

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           IE+  T    L      FDAVIASEV+EHV +P  F +  S      G+  I+T NR+  
Sbjct: 137 IEHFQTCNSTL------FDAVIASEVVEHVDNPELFIEKCSESLKPGGSLFITTQNRTAA 190

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           ++A  I  AE+I++ +P+GTH W+ F+T +E+  IL + +  ++++ G+ YNP    W  
Sbjct: 191 SWALVICGAEYIMNVVPRGTHDWNKFITLDEMTSILDKNNCQLRQLRGYTYNPFLNHWDW 250

Query: 331 SDDISVNFIAFGTK 344
                +N+    TK
Sbjct: 251 IKSTDINYALHATK 264


>gi|37526939|ref|NP_930283.1| 3-demethylubiquinone-9 3-methyltransferase [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|39932486|sp|Q7N2M5.1|UBIG_PHOLL RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|36786372|emb|CAE15425.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 240

 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 140/247 (56%), Gaps = 16/247 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N K  S P+++   E+ KF AIA  WWD EG ++PLH +NP RL +I       F     
Sbjct: 2   NIKTPSTPNNVDQQEIEKFEAIASRWWDLEGEFQPLHRINPLRLNYILQRSGGIF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
                 G  ++DVGCGGGILSE +AR GA VTG+D   + +++ARLHA    ET   + Y
Sbjct: 57  ------GKKVLDVGCGGGILSESMAREGADVTGLDMGTEPLQVARLHA---LETGIPVTY 107

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              T E   E+  + +D V   E++EHV DP     + + L    G    STINR+ +A+
Sbjct: 108 VQETVESHAEKYPQAYDIVTCMEMLEHVPDPQSVVHACAQLVKPGGHVFFSTINRNKKAW 167

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             A+I AE+IL  +PKGTH    F+ P EL+  + R S+  K + G  YNPLT ++SL  
Sbjct: 168 LMAVIGAEYILKMVPKGTHDAKKFIRPSELIGWIDRTSLREKHIIGLHYNPLTDKFSLGH 227

Query: 333 DISVNFI 339
           ++ VN++
Sbjct: 228 NVDVNYM 234


>gi|406596977|ref|YP_006748107.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           ATCC 27126]
 gi|406374298|gb|AFS37553.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           ATCC 27126]
          Length = 234

 Score =  180 bits (456), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 142/241 (58%), Gaps = 15/241 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WWD EG +KPLH +NP RL FI       F K           
Sbjct: 2   TNVDQQEINKFSELASRWWDPEGEFKPLHLINPLRLDFINQHSEGLFDK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            +VD+GCGGGIL+E +AR GATVTG+D  E ++++A+LH  L+     ++Y C+TAE   
Sbjct: 51  KVVDIGCGGGILAESMARAGATVTGLDMAEASLEVAKLHG-LESGVK-VDYVCSTAEAFA 108

Query: 223 EEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E    +FD V   E++EHV DPA    + + L    G    ST+NR++++Y   I+ AE+
Sbjct: 109 EANAGQFDVVTCMEMLEHVPDPASVVLACAKLVKPGGHVFFSTLNRNLKSYLMGIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIA 340
           IL  +PKGTH  S F+ P EL+ +   A +  ++M G   +P++  + LS +++ VN++ 
Sbjct: 169 ILKLVPKGTHDHSKFIKPSELMAMTDHAGLLPRDMTGLHMDPISQGFYLSANNVDVNYLL 228

Query: 341 F 341
           +
Sbjct: 229 Y 229


>gi|333376430|ref|ZP_08468209.1| 3-demethylubiquinone-9 3-O-methyltransferase [Kingella kingae ATCC
           23330]
 gi|332967935|gb|EGK07023.1| 3-demethylubiquinone-9 3-O-methyltransferase [Kingella kingae ATCC
           23330]
          Length = 238

 Score =  180 bits (456), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 136/233 (58%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +AD WWD  G +KPLH +NP RL +I          D ++     G  ++DVG
Sbjct: 11  EIQKFSQLADKWWDKTGEFKPLHDINPLRLDYI----------DQFAQ--LSGKTVLDVG 58

Query: 169 CGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A+ GA +V GID  E +++ A  HA +  + S ++Y C + E L  E   
Sbjct: 59  CGGGILSESMAQRGAQSVLGIDMAELSLQTASAHA-IANQVSNVQYRCISVEDLAAEMPH 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP    ++ + L    G    STINR+  +Y  AI+ AE++L+ +
Sbjct: 118 TFDVVSCMEMLEHVPDPESIIRACAKLVKPNGWVFFSTINRNPTSYIHAILGAEYLLNLV 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + + + +D+    G  YN LT R+ L D++ VN++
Sbjct: 178 PKGTHDWQKFITPAELARMARHSGLDICTTQGMSYNVLTKRYFLGDNVDVNYM 230


>gi|383481851|ref|YP_005390766.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rhipicephali str. 3-7-female6-CWPP]
 gi|378934190|gb|AFC72693.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rhipicephali str. 3-7-female6-CWPP]
          Length = 289

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  ++  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKMSHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYSAR----PFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGIKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTEIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|421493182|ref|ZP_15940539.1| UBIG [Morganella morganii subsp. morganii KT]
 gi|400192350|gb|EJO25489.1| UBIG [Morganella morganii subsp. morganii KT]
          Length = 262

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 152/265 (57%), Gaps = 14/265 (5%)

Query: 76  DSASVSPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNP 135
           D+ + S     ++   +  N+      +++  AE+ KF  +A  WWD EG +KPLH +NP
Sbjct: 4   DAIAYSGRFCRSKREKETMNDTASPLTANVDPAEIKKFEDVASRWWDLEGEFKPLHRINP 63

Query: 136 TRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNI 195
            RLA+I+  +   F           G  ++DVGCGGGIL+E +AR GA VTG+D   + +
Sbjct: 64  LRLAYIQQRVNGVF-----------GKKVLDVGCGGGILAESMAREGADVTGLDMGAEPL 112

Query: 196 KIARLHADLDPETSTIEYCCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALT 254
           ++ARLHA L+  T  I Y   T E+  E+  +++D V   E++EHV DPA   +S + L 
Sbjct: 113 QVARLHA-LENGTD-ITYVQETVEQHAEKHAQQYDVVACMEMLEHVPDPASVVRSCARLV 170

Query: 255 VSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVK 314
              G  V STINR+ +A+  A+IAAE+IL  +P GTH    F+ P EL+  L    +  +
Sbjct: 171 KPGGDVVFSTINRNKKAWFMAVIAAEYILKMVPPGTHDAKKFIRPAELIDWLNNTGLREQ 230

Query: 315 EMAGFVYNPLTGRWSLSDDISVNFI 339
            M G  YNPL+ ++ L+ ++ VN++
Sbjct: 231 HMIGLHYNPLSDKFWLAPNVDVNYM 255


>gi|416017882|ref|ZP_11564919.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|416028563|ref|ZP_11571508.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|422404259|ref|ZP_16481313.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|320323355|gb|EFW79443.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327552|gb|EFW83564.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330876565|gb|EGH10714.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 232

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 140/238 (58%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++  AE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDRAEIAKFEALAHRWWDRESEFKPLHDINPLRVNWIDERVG------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGILSE +A  GATVTGID  E  + +A+LH  L+   S +EY   TAE + 
Sbjct: 50  KVLDVGCGGGILSEAMALRGATVTGIDMGEAPLAVAQLH-QLESGVS-VEYRQITAEDMA 107

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           EE   ++D V   E++EHV  P+   ++   +    G    STINR+ +AY  A++ AE+
Sbjct: 108 EEMPEQYDVVTCLEMLEHVPAPSSVIRACYRMVKPGGQVFFSTINRNPKAYLFAVVGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL+ LP+GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 ILNLLPRGTHDFKKFIRPSELGAWSRDAGLQVKDVIGLTYNPLTKHYKLTSDVGVNYM 225


>gi|117920416|ref|YP_869608.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. ANA-3]
 gi|166201222|sp|A0KWN3.1|UBIG_SHESA RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|117612748|gb|ABK48202.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. ANA-3]
          Length = 236

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 136/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA L+   S I Y   TAE   EE R++
Sbjct: 60  CGGGILSESMARIGAIVHGLDMGEEPLEVARLHA-LETGVS-INYVKNTAEAHREEHREY 117

Query: 229 -DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
            D V   E++EHV DP    ++   +    G    STINR+++++   II AE++L  LP
Sbjct: 118 YDVVTCMEMLEHVPDPQSVIQACCDMVKPGGFVFFSTINRNIKSFVETIIGAEYLLKMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 178 IGTHDHNKFIKPSELMALVDNTDLLCKDALGITYNPLTGIFKYTPKVDVNYM 229


>gi|431932523|ref|YP_007245569.1| ubiquinone biosynthesis O-methyltransferase [Thioflavicoccus
           mobilis 8321]
 gi|431830826|gb|AGA91939.1| ubiquinone biosynthesis O-methyltransferase [Thioflavicoccus
           mobilis 8321]
          Length = 264

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 135/244 (55%), Gaps = 3/244 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +S+   E+A +  +AD WWD++GP+ PLH LN  R+ +IR  L           +P  GL
Sbjct: 9   TSVDPDEVAYYERLADRWWDSDGPFWPLHRLNGFRVGYIRERLGSALGHHEAGTQPLAGL 68

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++D+GCGGGILSE LAR+GA V GID   KNI++A LHA  +     I+Y   +AE+L 
Sbjct: 69  RLLDIGCGGGILSESLARLGAEVVGIDVAPKNIRVASLHA--ERAGLAIDYRLVSAEELA 126

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
                FDAV+  EVIEHV   + F  S   L    G  V++TINR+  AY  AI+ AE I
Sbjct: 127 ASGATFDAVLNMEVIEHVEGLSGFLASCGRLVRPGGVMVVATINRTPLAYLMAILGAERI 186

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L WLP GTH +   + P E+V  L     + +   G   NP    +  +  +SVN++   
Sbjct: 187 LRWLPVGTHHYRKLVRPAEVVDGLG-TDFEERHRIGVRVNPFDRSFYYTRLLSVNYMMLF 245

Query: 343 TKNS 346
            K +
Sbjct: 246 QKTA 249


>gi|383935682|ref|ZP_09989116.1| 2-polyprenyl-6-hydroxyphenyl methylase [Rheinheimera nanhaiensis
           E407-8]
 gi|383703251|dbj|GAB59207.1| 2-polyprenyl-6-hydroxyphenyl methylase [Rheinheimera nanhaiensis
           E407-8]
          Length = 236

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 138/237 (58%), Gaps = 14/237 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF+ IA  WWD +G +KPLH LNP RL++I   L   F K            ++D+G
Sbjct: 11  EIAKFNDIASRWWDPDGEFKPLHLLNPVRLSYISDELQGLFGK-----------TVIDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA VTG+D    ++++ARLHA L+    T+ Y   TAE   ++   +
Sbjct: 60  CGGGILAESMARSGAVVTGLDMASDSLEVARLHA-LESGV-TVNYQQATAEDYAQQHSGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV  P    ++ + L         ST+N++ +AY  AII AEH+L  +P
Sbjct: 118 FDVVTCMEMLEHVPAPMSVIQACADLAKPGATLFFSTLNKTAKAYLLAIIGAEHVLKLVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           KGTH++S F+ P EL+  +++A +++ +  G  +NPL   +     + VN+I    K
Sbjct: 178 KGTHEFSKFIRPSELMRFIEQAGLELVDATGLHFNPLKNSFKTGPGLDVNYIVVARK 234


>gi|294012470|ref|YP_003545930.1| hexaprenyldihydroxybenzoate methyltransferase [Sphingobium
           japonicum UT26S]
 gi|292675800|dbj|BAI97318.1| hexaprenyldihydroxybenzoate methyltransferase [Sphingobium
           japonicum UT26S]
          Length = 245

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/241 (41%), Positives = 141/241 (58%), Gaps = 6/241 (2%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           ++A S++   E A F  +A  WWD +G    LH LNP RL +IR  + RH+     S RP
Sbjct: 3   NTASSTIDPREAAHFGGMAADWWDPKGSSAMLHKLNPVRLRYIRDAIDRHWPGHDRSFRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             G   +DVGCG G+LSEPLARMGA +T +DA E+NI +AR HA    +   I+Y  T  
Sbjct: 63  LAGRRALDVGCGAGLLSEPLARMGAALTALDAAEENIAVARSHA--AGQGLAIDYRATPV 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L  E+  FD V + EVIEHVADPA F  +L+      G  ++ST NR+  +    I  
Sbjct: 121 EQL--EESGFDLVTSMEVIEHVADPAAFVAALAEKLAPGGLLILSTPNRTPLSRLAMITI 178

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
            E I   +PKGTH W  F+ PEEL  +L+ A ++V + AG  + P  G + LS + ++++
Sbjct: 179 GESI-GGIPKGTHDWHKFINPEELTKLLEDAGLEVIDSAGISFTPGRG-FILSPNQAIDY 236

Query: 339 I 339
           +
Sbjct: 237 L 237


>gi|124267423|ref|YP_001021427.1| 3-demethylubiquinone-9 3-methyltransferase [Methylibium
           petroleiphilum PM1]
 gi|124260198|gb|ABM95192.1| 3-demethylubiquinone-9 3-methyltransferase [Methylibium
           petroleiphilum PM1]
          Length = 253

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/239 (41%), Positives = 144/239 (60%), Gaps = 14/239 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKF  +A  WWD E  ++PLH +NP RL ++              A   +G  ++DVG
Sbjct: 28  ELAKFGDLAHRWWDPESEFRPLHQINPLRLEWLAKL-----------AGGLQGKRVLDVG 76

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILS+ +AR GA V GID   K +K+A+LHA L+  T +++Y    AE L  EQ  +
Sbjct: 77  CGGGILSDAMARQGAEVLGIDLSSKALKVAQLHA-LEVATPSVQYREIAAEALAAEQPGR 135

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP+   ++ +AL    G    ST+NR+ +A+  AI+ AE++L  LP
Sbjct: 136 YDVVTCMEMLEHVPDPSSIVQACAALVRPGGHVFFSTLNRNPKAFLFAIVGAEYLLKLLP 195

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           +GTH+++ F+ P EL    + A +DV    G  YNP+T R+ LS D SVN++ FG + +
Sbjct: 196 RGTHEYARFIRPSELARWCREADLDVSATRGMEYNPVTRRYWLSADTSVNYL-FGCRRA 253


>gi|30250466|ref|NP_842536.1| 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas europaea
           ATCC 19718]
 gi|39932521|sp|Q81ZZ2.1|UBIG_NITEU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|30139307|emb|CAD86459.1| ubiG, 3-demethylubiquinone-9 3-methyltransferase [Nitrosomonas
           europaea ATCC 19718]
          Length = 235

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 136/232 (58%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           EL KFS +A  WWD    +KPLH +NP RL +I   +     K            ++DVG
Sbjct: 12  ELEKFSQLAHHWWDPNSEFKPLHEINPLRLNYIDEIIGGLSEK-----------TVIDVG 60

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGILSE +A  GA+VTGID  +K +K+A+LH  L    + ++Y   T E L  E+ R 
Sbjct: 61  CGGGILSESMAARGASVTGIDLSDKALKVAKLH--LLESGNQVDYRKITVEALATERPRY 118

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   +S + L  S G    ST+NR+ ++Y  AII AE+IL  LP
Sbjct: 119 YDVVTCMEMLEHVPDPASVIQSCARLVKSGGWVFFSTLNRNPKSYLYAIIGAEYILRLLP 178

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH+++ F+ P EL  + + A +    + G  YNP+T  ++L  D SVN+I
Sbjct: 179 RGTHEYAKFIKPSELAHMARSAGLMESGIVGMTYNPITKVYALEADTSVNYI 230


>gi|15604471|ref|NP_220989.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia prowazekii
           str. Madrid E]
 gi|383486614|ref|YP_005404294.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. GvV257]
 gi|383488022|ref|YP_005405701.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Chernikova]
 gi|383488867|ref|YP_005406545.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Katsinyian]
 gi|383489707|ref|YP_005407384.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Dachau]
 gi|383499847|ref|YP_005413208.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. BuV67-CWPP]
 gi|383500684|ref|YP_005414044.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. RpGvF24]
 gi|386082483|ref|YP_005999060.1| Ubiquinone biosynthesisO-methyltransferase [Rickettsia prowazekii
           str. Rp22]
 gi|7674407|sp|Q9ZCT9.1|UBIG_RICPR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|3861165|emb|CAA15065.1| 3-DEMETHYLUBIQUINONE-9 3-METHYLTRANSFERASE (ubiG) [Rickettsia
           prowazekii str. Madrid E]
 gi|292572247|gb|ADE30162.1| Ubiquinone biosynthesisO-methyltransferase [Rickettsia prowazekii
           str. Rp22]
 gi|380756979|gb|AFE52216.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. GvV257]
 gi|380758381|gb|AFE53617.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. RpGvF24]
 gi|380760901|gb|AFE49423.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Chernikova]
 gi|380761746|gb|AFE50267.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Katsinyian]
 gi|380762593|gb|AFE51113.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. BuV67-CWPP]
 gi|380763430|gb|AFE51949.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           prowazekii str. Dachau]
          Length = 252

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 10/236 (4%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           SS+   EL KF  I+  WW+  G +  LH +N  R+ +I   +  ++            L
Sbjct: 2   SSINKKELEKFEKISHNWWNKNGEFGILHRINHIRIEYIIEKIKSNYN-------DISKL 54

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            I+DVGCGGG+++ PLA  G  VT IDA++ N++ A ++A        I Y   T E+L 
Sbjct: 55  QILDVGCGGGLIAAPLALQGFNVTAIDALKSNVETATIYAQ--KNGLKINYLQATIEEL- 111

Query: 223 EEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E  + +D VI  EVIEHVA+  +F  +L       G  +IST+NR+ +AY   II AE+I
Sbjct: 112 ENDKLYDVVICLEVIEHVANIQQFILNLVQHIKPNGIAIISTMNRTKKAYLFGIIVAEYI 171

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           L W+PK TH +S F+ P E+  IL   +I++KE+ G V+N     W LS+DI VN+
Sbjct: 172 LGWVPKNTHDYSKFVKPSEIYEILTDTNIEIKELKGLVFNLAKNEWKLSNDIDVNY 227


>gi|358410611|gb|AEU10006.1| 3-demethylubiquinone-9 3-methyltransferase [Photobacterium damselae
           subsp. piscicida]
          Length = 236

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 137/239 (57%), Gaps = 14/239 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE++KF  +A  WWD EG +KPLH +NP RL F+              A    G  ++DV
Sbjct: 10  AEISKFEDMASRWWDPEGEFKPLHQINPLRLNFVID-----------KADGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +A  GA VTG+D  ++ + +ARLHA L+     +EY   TAE+  EE  +
Sbjct: 59  GCGGGILAESMAVEGADVTGLDMGKEPLTVARLHA-LEAGVK-LEYVQATAEEHAEENPQ 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV DPA    + + +    G    ST+NR++++Y  AI+ AEH+L  +
Sbjct: 117 AYDVVTCMEMLEHVPDPASVIAACAKMVKPGGHVFFSTLNRNIKSYLFAIVGAEHLLKIV 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           PKGTH    F+ P E++ ++ R  +  K + G  YNPLT  + L  ++ VN+I    K 
Sbjct: 177 PKGTHHHEKFIRPSEMMAMIDRTELQDKHITGLHYNPLTNTYYLGTNVDVNYIVHTIKQ 235


>gi|406941652|gb|EKD74085.1| hypothetical protein ACD_45C00082G0002 [uncultured bacterium]
          Length = 230

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 135/237 (56%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS  A  WWD  G  K LH +NP R+ +I+  +                  ++D+G
Sbjct: 8   EINKFSHYAAHWWDLNGECKSLHEINPLRVGYIQQKIA------------LANKTVIDIG 55

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E +A++GA VTGID  E  + +A+LH       + I Y  TTAE +  E    
Sbjct: 56  CGGGILAESMAKLGANVTGIDMSEAALNVAKLHQH--ESNTCINYQLTTAEDIAAEHPEH 113

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    ++ + L    G    ST+NR+M++Y  AI+ AE++L  LP
Sbjct: 114 YDIVTCLEMLEHVPDPIAIIQACAKLAKPNGHLFFSTLNRNMKSYLFAILGAEYVLKLLP 173

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           K TH ++ F+ P EL    ++A++++ EM G  YNP T ++ L++DISVN+I    K
Sbjct: 174 KNTHDYTKFIRPSELATWARKANLNIVEMIGISYNPFTKKYLLTEDISVNYIVHMKK 230


>gi|238651077|ref|YP_002916935.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia peacockii
           str. Rustic]
 gi|238625175|gb|ACR47881.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia peacockii
           str. Rustic]
          Length = 289

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKVSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ ++Y   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKSYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|421746031|ref|ZP_16183855.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Cupriavidus
           necator HPC(L)]
 gi|409775454|gb|EKN56937.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Cupriavidus
           necator HPC(L)]
          Length = 249

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 141/259 (54%), Gaps = 21/259 (8%)

Query: 81  SPSINTAENHSQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAF 140
           SP I+   +  Q+  N      + LK  E+ KFS +A  WWD    +KPLH +NP RL++
Sbjct: 5   SPVIHPTVDTRQIARN------ADLK--EIDKFSEMAHRWWDPNSEFKPLHEINPLRLSW 56

Query: 141 IRSTLCRHFRKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARL 200
           I S                 G N+VD+GCGGGILSE +AR GATV GID   K +K+A L
Sbjct: 57  IDSI------------ADLRGKNVVDIGCGGGILSESMARAGATVRGIDLSTKALKVADL 104

Query: 201 HADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGAT 260
           H+ L+   +                  FD V   E++EHV DPA   ++ + L    G  
Sbjct: 105 HS-LESGVAVTYEEIAAEALAARMPASFDVVTCMEMLEHVPDPASIVRACATLVRPGGHV 163

Query: 261 VISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFV 320
             STINR+++AY  A++ AE++L+ LP+GTH +  F+ P EL    ++A +D+ E+ G V
Sbjct: 164 FFSTINRNLKAYLLAVLGAEYVLNMLPRGTHDYDKFIKPAELARFARQAGLDLIELRGMV 223

Query: 321 YNPLTGRWSLSDDISVNFI 339
           Y PL+  + LS D  VN++
Sbjct: 224 YRPLSQVYELSRDTDVNYM 242


>gi|113970256|ref|YP_734049.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. MR-4]
 gi|123029670|sp|Q0HIX5.1|UBIG_SHESM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|113884940|gb|ABI38992.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. MR-4]
          Length = 236

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKLVEEQRK 227
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA    ET  +I Y   TAE   E+ R+
Sbjct: 60  CGGGILSESMARIGAVVDGLDMGEEPLEVARLHA---LETGVSINYVKNTAEAHREDHRE 116

Query: 228 F-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           + D V   E++EHV DP    ++   +    G    STINR+++++   II AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPDPQSVIQACCDMVKPGGFVFFSTINRNIKSFVETIIGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 177 PIGTHDHNKFIKPSELMALVDNTDLLCKDALGITYNPLTGIFKYTPKVDVNYM 229


>gi|383757249|ref|YP_005436234.1| 3-demethylubiquinone-9 3-methyltransferase [Rubrivivax gelatinosus
           IL144]
 gi|381377918|dbj|BAL94735.1| 3-demethylubiquinone-9 3-methyltransferase UbiG [Rubrivivax
           gelatinosus IL144]
          Length = 234

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/232 (42%), Positives = 133/232 (57%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           ELAKFS +A  WWD E  ++PLH +NP RL +I S                 G  ++DVG
Sbjct: 9   ELAKFSDLAHRWWDPESEFRPLHEINPLRLDWIDSLAG------------LRGKTVLDVG 56

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGG+LSE +AR  A VTGID   K + +ARLHA L+ E   +EY     E L  E+   
Sbjct: 57  CGGGVLSESMARRAAHVTGIDLSTKALGVARLHA-LESEVMNLEYREIATEALAAERPAS 115

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    ST+NR+ +A+  AI+ AE++L  LP
Sbjct: 116 FDVVTCMEMLEHVPDPASVIEACARLAKPGGWVFFSTLNRNPKAFLFAIVGAEYVLKMLP 175

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH++  F+ P EL    + A +      G  YNPLT R+ LSDD SVN++
Sbjct: 176 RGTHEYERFIRPSELARWCRDAGLSPAGSRGLQYNPLTKRYWLSDDTSVNYL 227


>gi|414343451|ref|YP_006984972.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter oxydans
           H24]
 gi|411028786|gb|AFW02041.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter oxydans
           H24]
          Length = 251

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 142/248 (57%), Gaps = 15/248 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG- 161
           SS+  +E+A FSA+A  WW+  GP  PLHA+NP R  ++ S           S +P EG 
Sbjct: 14  SSVSDSEIAHFSALAKDWWNPRGPMAPLHAMNPLRTDWVASRTT--------SLKPSEGK 65

Query: 162 -LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH---ADLDPETSTIEYCCTT 217
            L+++D+GCG G+ SE  A++G    G+DA    I+ AR H       P  + + Y   +
Sbjct: 66  RLSLLDIGCGAGLASEAFAKLGFETLGLDASPDGIEAARTHQATYPPPPAAAPLAYRNGS 125

Query: 218 AEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           AE LV+E  +FD V A EVIEHV DP +F   L+ LT   G   +ST++R+ R++A A +
Sbjct: 126 AEDLVDEGAEFDVVSALEVIEHVNDPQDFLHMLATLTRPGGMVAVSTMSRTPRSFAMAKL 185

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LP GTH W  F+ PEEL  + + A + + ++AG  Y P   RW  + D  VN
Sbjct: 186 GAEYLLRMLPVGTHDWKKFIKPEELAAMARNAGLRMTDIAGMSYLP--PRWRTTRDTGVN 243

Query: 338 FIAFGTKN 345
           +IA  TK 
Sbjct: 244 YIAMFTKG 251


>gi|255320668|ref|ZP_05361845.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens SK82]
 gi|262380699|ref|ZP_06073852.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens SH164]
 gi|255302284|gb|EET81524.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens SK82]
 gi|262297647|gb|EEY85563.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens SH164]
          Length = 239

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 14/238 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL ++          D  S     G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWV----------DELSGG-LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGIL+E +AR GA  V G+D  E  + + RLHA  +     IEY     E+L EEQ  
Sbjct: 59  CGGGILTESMARRGAAEVLGVDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLAEEQAD 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  L
Sbjct: 118 QYDIVTCMEMLEHVPDPASIIKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYLLRML 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH +  F+ P EL   ++ A +++K+M G  YNPLT  + L+ ++ VN++    K
Sbjct: 178 PKGTHDYHKFIRPSELAHDIRAAGLELKQMTGLHYNPLTKHYWLAPNVDVNYMVHTVK 235


>gi|410635052|ref|ZP_11345672.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola lipolytica
           E3]
 gi|410145389|dbj|GAC12877.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola lipolytica
           E3]
          Length = 238

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 143/240 (59%), Gaps = 15/240 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KFSA+A  WWD +G +KPLH +NP R  +I+      F K           +++DV
Sbjct: 9   AEIEKFSALASRWWDLQGEFKPLHEINPLRADYIQQRANGVFDK-----------SVIDV 57

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL-VEEQR 226
           GCGGGILSE LA+ GA VTGID    ++++ARLH  L+     + Y   TAE++ +E  +
Sbjct: 58  GCGGGILSEYLAKQGAHVTGIDMAADSLEVARLHG-LESGVK-VNYQQITAEEMALEHAK 115

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DPA   ++ + +    G    ST+NR++++Y  AI+ AE IL+ +
Sbjct: 116 QFDIVTCLEMLEHVPDPASIVRACATMAKPGGHVFFSTLNRNLKSYLMAIVGAEKILNLV 175

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIAFGTKN 345
           PKGTHQ+  F+ P EL+  +    +  K M G   NP + ++ LS+ ++ VN++    K+
Sbjct: 176 PKGTHQYEKFIQPAELLKCIDSTELLTKHMIGLHMNPFSKQFYLSEQNVDVNYLVHCQKS 235


>gi|284009347|emb|CBA76528.1| 3-demethylubiquinone-9 3-methyltransferase [Arsenophonus nasoniae]
          Length = 243

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 144/246 (58%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           NNK   + +++  AE+ KFS++A  WWD    ++PLH +NP RL +I             
Sbjct: 2   NNKNSLSQANVDLAEIDKFSSVATRWWDQTSEFQPLHRINPLRLNYILQ----------- 50

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
            A    G  ++D+GCGGGILSE +A+ GA VTGID   + +++A+LHA L+     I+Y 
Sbjct: 51  HANGLFGKKVLDIGCGGGILSESMAKEGALVTGIDMATEPLEVAKLHA-LESNIQ-IDYL 108

Query: 215 CTTAEKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             TAE   E+  K +D V   E++EHV DP    +S + L    G    STINR+ +A+ 
Sbjct: 109 EETAESHAEKHPKTYDIVTCMEMLEHVPDPESIVQSCAKLVKPGGHVFFSTINRNKKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            AIIAAEHIL  +PKGTH    F+ P EL+  + + S+  + + G  YNP++ ++SL  +
Sbjct: 169 LAIIAAEHILKMVPKGTHNVKKFIRPSELLNWIDKTSLQEQHIIGLHYNPISDKFSLGSN 228

Query: 334 ISVNFI 339
           + VN++
Sbjct: 229 VDVNYM 234


>gi|410086889|ref|ZP_11283596.1| 3-demethylubiquinone-9 3-methyltransferase [Morganella morganii
           SC01]
 gi|409766723|gb|EKN50813.1| 3-demethylubiquinone-9 3-methyltransferase [Morganella morganii
           SC01]
          Length = 241

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 140/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RLA+I+  +   F           G  ++DV
Sbjct: 15  AEIKKFEDVASRWWDLEGEFKPLHRINPLRLAYIQQRVNGVF-----------GKKVLDV 63

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +AR GA VTG+D   + +++ARLHA L+  T  I Y   T E+  E+  +
Sbjct: 64  GCGGGILAESMAREGADVTGLDMGAEPLQVARLHA-LENGTD-ITYVQETVEQHAEKHAQ 121

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DPA   +S + L    G  V STINR+ +A+  A+IAAE+IL  +
Sbjct: 122 QYDVVTCMEMLEHVPDPASVVRSCARLVKPGGDVVFSTINRNKKAWFMAVIAAEYILKMV 181

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH    F+ P EL+  L    +  + M G  YNPL+ ++ L+ ++ VN++
Sbjct: 182 PPGTHDAKKFIRPAELIDWLNNTGLREQHMIGLHYNPLSDKFWLAPNVDVNYM 234


>gi|383482476|ref|YP_005391390.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           montanensis str. OSU 85-930]
 gi|378934830|gb|AFC73331.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           montanensis str. OSU 85-930]
          Length = 289

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 143/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP R  +I   +  H+             
Sbjct: 2   SSIDKRELEKFEKISHNWWNKDGEFGILHRINPIRFEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYSAR----PFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        + Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKVNYLQSTIEEL-ESNKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTEIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|336311382|ref|ZP_08566346.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. HN-41]
 gi|335865185|gb|EGM70235.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. HN-41]
          Length = 236

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 136/233 (58%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKLVEE-QR 226
           CGGGILSE +AR+GA V G+D  E  +++ARLHA    ET  +I+Y   TAE   ++ Q 
Sbjct: 60  CGGGILSESMARIGAVVDGLDMGEDPLEVARLHA---LETGVSIDYVKNTAEAHSQDHQG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV DP    ++   +    G    STINR+++++   II AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPDPQSVIQACCDMVKPGGFVFFSTINRNLKSFVETIIGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  + ++ VN++
Sbjct: 177 PIGTHNHNKFIKPSELIALVDNTDLICKDALGISYNPLTGIFKYTPNVDVNYM 229


>gi|423206591|ref|ZP_17193147.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AMC34]
 gi|404622143|gb|EKB19008.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas veronii
           AMC34]
          Length = 238

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 139/233 (59%), Gaps = 14/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F K            I+D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLFGK-----------RILDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE-KLVEEQRK 227
           CGGGILSE +AR GA VTGID  ++ + +ARLHA L+ +   +EY   TAE    E   +
Sbjct: 60  CGGGILSESMARRGAKVTGIDMGKEPLGVARLHA-LE-QGVELEYRQITAEAHAAEVPGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA    +++ L    G   +STINR+ ++Y   II AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLCAIATLVRPGGRVFVSTINRNPKSYLMMIIGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           KGTH    F+TP EL  + + A + V++M+G  Y PLT ++ L  ++ VN++ 
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLTNQFKLGKNVDVNYMV 230


>gi|217970134|ref|YP_002355368.1| 3-demethylubiquinone-9 3-methyltransferase [Thauera sp. MZ1T]
 gi|217507461|gb|ACK54472.1| ubiquinone biosynthesis O-methyltransferase [Thauera sp. MZ1T]
          Length = 234

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 137/233 (58%), Gaps = 15/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS +A  WWD    ++PLH +NP RL +I          D  +A    G  ++D+
Sbjct: 9   AELQKFSDLAHRWWDPASEFRPLHEINPLRLGWI----------DGKAA--LAGKKVLDI 56

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +A +GA VTGID  EK + +ARLH  L      ++Y   +AE L EE   
Sbjct: 57  GCGGGILAEGMAALGAEVTGIDLSEKALSVARLH--LFESGHKVDYRHMSAEALAEESPG 114

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DPA    + + L    G   +ST+NR+ ++Y  AI+ AE++L  L
Sbjct: 115 RFDVVTCMEMLEHVPDPASIVTACARLVKPGGHVFLSTLNRNPKSYLFAIVGAEYLLKLL 174

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH+++ F+ P EL    + A +DV+E+ G  YNPL   +SL  D  VN++
Sbjct: 175 PAGTHEYARFIKPSELSRHCRNAHLDVQEIIGLSYNPLAKTYSLGRDTDVNYL 227


>gi|28199369|ref|NP_779683.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           Temecula1]
 gi|182682096|ref|YP_001830256.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa M23]
 gi|386083416|ref|YP_005999698.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           subsp. fastidiosa GB514]
 gi|417558024|ref|ZP_12209022.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Xylella fastidiosa EB92.1]
 gi|32130271|sp|Q87BG5.1|UBIG_XYLFT RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725571|sp|B2I705.1|UBIG_XYLF2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|28057475|gb|AAO29332.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           Temecula1]
 gi|182632206|gb|ACB92982.1| ubiquinone biosynthesis O-methyltransferase [Xylella fastidiosa
           M23]
 gi|307578363|gb|ADN62332.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa
           subsp. fastidiosa GB514]
 gi|338179421|gb|EGO82369.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Xylella fastidiosa EB92.1]
          Length = 246

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 136/236 (57%), Gaps = 15/236 (6%)

Query: 106 KHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIV 165
           + +EL KF++    WWD  GP KPLHALNP RL +I   +               G  ++
Sbjct: 13  RQSELDKFASFTSGWWDPHGPQKPLHALNPVRLDYISKRVS------------LSGARVL 60

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ 225
           DVGCGGG+LSE LAR GA VT ID V + IK+ARLH  L+     ++Y     E L+ EQ
Sbjct: 61  DVGCGGGLLSEALARQGAHVTAIDLVPELIKVARLHG-LESGIQ-VDYRIQAIEDLLAEQ 118

Query: 226 -RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++ 
Sbjct: 119 PAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVR 178

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct: 179 LLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234


>gi|410663079|ref|YP_006915450.1| 3-demethylubiquinone-9 3-methyltransferase [Simiduia agarivorans
           SA1 = DSM 21679]
 gi|409025436|gb|AFU97720.1| 3-demethylubiquinone-9 3-methyltransferase [Simiduia agarivorans
           SA1 = DSM 21679]
          Length = 222

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/232 (42%), Positives = 139/232 (59%), Gaps = 22/232 (9%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA 156
           K H++ +++  AE+AKF A+A+ WWD    +KPLH +NP R  +I     +H        
Sbjct: 2   KTHTS-TNVDPAEVAKFEALANRWWDPSSEFKPLHDINPLRANYID----KHAN------ 50

Query: 157 RPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEY 213
               G  I+DVGCGGG+L+E +A+ GA+VTGID  E  +K+ARLHA   +LD     I+Y
Sbjct: 51  --VAGKKILDVGCGGGLLTEAMAQRGASVTGIDMGETPLKVARLHALESNLD-----IDY 103

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
             TTAE    E   +FD V   E++EHV DPA   ++ +A+    G    STINR+ +AY
Sbjct: 104 HQTTAEAYASENANRFDVVTCLEMLEHVPDPASVIRACAAMVKPGGHLFFSTINRNPKAY 163

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPL 324
           A AII AE++L  LPKGTH+++ F+ P EL   L+ A + +  M G  YNP 
Sbjct: 164 AFAIIGAEYVLKLLPKGTHEYAKFIRPSELAGWLRSAGLQIGHMTGMTYNPF 215


>gi|114778684|ref|ZP_01453496.1| 3-demethylubiquinone-9 3-methyltransferase [Mariprofundus
           ferrooxydans PV-1]
 gi|114551046|gb|EAU53608.1| 3-demethylubiquinone-9 3-methyltransferase [Mariprofundus
           ferrooxydans PV-1]
          Length = 234

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 141/238 (59%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+AKF A+A+ WWD  G +KPLH +NP RL +I   L            P +   I+DV
Sbjct: 9   SEIAKFEAMAEEWWDPLGKFKPLHRINPLRLDYIDKQL------------PLQNAAILDV 56

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+L+E +A  GA VTGID   K + IARLH++       +EY    A+       +
Sbjct: 57  GCGGGLLAENMAARGACVTGIDRSPKALTIARLHSE--QSGVHVEYVEDDAQSWATNHAE 114

Query: 228 -FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +DAV   EV+EHV D      + +++    G    +T+NR+  AY  AI+ AE++L WL
Sbjct: 115 HYDAVTCLEVLEHVPDVPRTVAACASMIKPGGLFFFATLNRTPVAYIKAILGAEYVLGWL 174

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH+++ F+ P E+ + L+ A ++++++ G  Y  L+  ++LSDD+SVN++ F  K
Sbjct: 175 PKGTHEYAKFIKPSEMNIALRDARLEIRDLRGISYALLSDHFALSDDLSVNYLGFAVK 232


>gi|58038528|ref|YP_190492.1| 3-demethylubiquinone-9 3-methyltransferase [Gluconobacter oxydans
           621H]
 gi|58000942|gb|AAW59836.1| 3-Demethylubiquinone-9 3-methyltransferase [Gluconobacter oxydans
           621H]
          Length = 251

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 141/242 (58%), Gaps = 17/242 (7%)

Query: 110 LAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRH---FRKDPYSARPFEGLNIVD 166
           +A FSA+A+ WW+  GP  PLHA+NP R  ++     RH    RK   S+ P   L+++D
Sbjct: 21  IAHFSALAEDWWNPRGPMAPLHAMNPLRTEWV----SRHVAPLRK--ASSGP---LSLLD 71

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHA---DLDPETSTIEYCCTTAEKLVE 223
           +GCG G+ SE  A++G    GIDA    I+ A  H     L PE +++ Y   +AE LV 
Sbjct: 72  IGCGAGLASEAYAKLGFNTLGIDASAAGIRAAEAHLAAHPLPPEAASLSYRNGSAEDLVA 131

Query: 224 EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           E  +FD V A EVIEHV DP +F   L+ LT   G   +ST+NR+ R++A A + AE++L
Sbjct: 132 EGARFDVVNALEVIEHVNDPQDFLIMLATLTKPGGMVAVSTLNRTPRSFAVAKLGAEYLL 191

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
             LP GTH W  F+ P+EL  + +RA + + ++AG  Y P   +W  S D  +N+IA   
Sbjct: 192 RMLPVGTHDWKKFIKPDELAAMARRAGLRMLDIAGMSYVPF--QWRESRDTGINYIAIFR 249

Query: 344 KN 345
           K+
Sbjct: 250 KD 251


>gi|374336077|ref|YP_005092764.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanimonas sp. GK1]
 gi|372985764|gb|AEY02014.1| 3-demethylubiquinone-9 3-methyltransferase [Oceanimonas sp. GK1]
          Length = 232

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 140/242 (57%), Gaps = 14/242 (5%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+ KF A+A  WWD +G +KPLH +NP RL +I              A    G  
Sbjct: 2   NVDQQEIDKFEAMASRWWDMDGDFKPLHDINPLRLGWIAD-----------KANGLFGKQ 50

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++D+GCGGGILSE LAR GA VTG+D  ++ + +ARLHA L+   S + Y   TAE++  
Sbjct: 51  VIDIGCGGGILSESLAREGAEVTGVDMGQEPLAVARLHA-LESGVS-VHYRQATAEQMAA 108

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E+  +FD V   E++EHV +PA    + + L       V STINR+ +A+   I AAEH+
Sbjct: 109 ERPEQFDLVTCMEMLEHVPEPASVVAACAQLAKPGANLVFSTINRNPKAWLLMIAAAEHL 168

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFG 342
           L  +PKGTH    F+ P EL   ++ A + VK++ G VY PL G ++LS D  VN++   
Sbjct: 169 LKMVPKGTHDHRKFIRPAELCRFIEAAGLVVKDIQGVVYRPLHGDFALSRDADVNYMIHA 228

Query: 343 TK 344
            K
Sbjct: 229 IK 230


>gi|430760814|ref|YP_007216671.1| 3-demethylubiquinone-9 3-methyltransferase [Thioalkalivibrio
           nitratireducens DSM 14787]
 gi|430010438|gb|AGA33190.1| 3-demethylubiquinone-9 3-methyltransferase [Thioalkalivibrio
           nitratireducens DSM 14787]
          Length = 246

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 142/239 (59%), Gaps = 15/239 (6%)

Query: 102 PSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEG 161
           P ++  AELAKF++ AD WWD  GP+  LHA+NP RL +I      H            G
Sbjct: 10  PQNVDPAELAKFTSRADDWWDPTGPFATLHAINPLRLNWIGEHAALH------------G 57

Query: 162 LNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL 221
             ++DVGCG GIL+E +A  GA VTGIDA  ++++IAR HA ++ E   I Y  TTAE  
Sbjct: 58  QEVLDVGCGAGILTEAMALRGARVTGIDAGAEHLEIARAHA-VESELE-IAYHHTTAEAF 115

Query: 222 VEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            E    +F  V   E++EHV +P     +LS L    G   +STINR+ RA+  AI+ AE
Sbjct: 116 AEHHAGRFAVVTCMEMLEHVPEPESALAALSRLVAPGGHLFLSTINRTPRAFVEAIVGAE 175

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           ++L  LP GTH+++ F+ P EL   L+   ++++++ G  Y+P+T  + L+  ++VN++
Sbjct: 176 YLLRLLPTGTHEYARFIRPSELAARLRAGGLEIRDLTGLTYSPITREYRLTPSVAVNYL 234


>gi|411009395|ref|ZP_11385724.1| ubiquinone biosynthesis O-methyltransferase [Aeromonas aquariorum
           AAK1]
 gi|423196579|ref|ZP_17183162.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas hydrophila
           SSU]
 gi|404632033|gb|EKB28662.1| 3-demethylubiquinone-9 3-methyltransferase [Aeromonas hydrophila
           SSU]
          Length = 238

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 141/235 (60%), Gaps = 15/235 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF AIA  WWD EG +KPLH +NP RL +I       F           G  I+D+G
Sbjct: 11  EIAKFEAIASRWWDMEGEFKPLHQINPVRLDWITDKSGGLF-----------GKRILDIG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E +AR GA VTGID  ++ + +ARLHA L+     +EY   TAE   +E   +
Sbjct: 60  CGGGILAESMARRGAQVTGIDMGKEPLGVARLHA-LEAGVE-LEYRQITAEAHADEAPGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++++ L    G   +STINR+ +AY   I+ AE+++  +P
Sbjct: 118 YDVVTCMEMLEHVPDPASVLRAIATLVRPGGKVFVSTINRNPKAYLMMILGAEYLMKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF-IAF 341
           KGTH    F+TP EL  + + A + V++M+G  Y PL+  + L  ++ VN+ +AF
Sbjct: 178 KGTHDHKKFITPAELCRMGEAAGLLVRDMSGVHYAPLSNSFKLGRNVDVNYMVAF 232


>gi|427403185|ref|ZP_18894182.1| 3-demethylubiquinone-9 3-methyltransferase [Massilia timonae CCUG
           45783]
 gi|425717921|gb|EKU80875.1| 3-demethylubiquinone-9 3-methyltransferase [Massilia timonae CCUG
           45783]
          Length = 234

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 15/237 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSAR-PFEGLNIVDV 167
           E+ KFS +A  WWD    ++PLH +NP RL +I             +AR P  G N++D+
Sbjct: 10  EIQKFSELAHRWWDPTSEFRPLHEINPLRLEWI-------------NARAPLSGKNVIDI 56

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGG+LSE +AR GA VTGID  +K +K+A LH+ L+             E   +E  +
Sbjct: 57  GCGGGVLSESMARKGAKVTGIDLSKKALKVADLHS-LESGVEVRYKHIAAEEMAEQEAGQ 115

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    ST+NR+ ++Y  A+I AE++L  LP
Sbjct: 116 FDVVTCMEMLEHVPDPASIVRAAAKLVKPGGHVFFSTLNRNPKSYLFAVIGAEYVLRMLP 175

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           +GTH +  F+TP EL   +++A + V  + G  YNPLT  +SL++D  VN++   +K
Sbjct: 176 RGTHDYGKFITPAELAQFIRQAGLQVDGLKGLTYNPLTKIYSLNNDTDVNYMVACSK 232


>gi|391344024|ref|XP_003746304.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Metaseiulus occidentalis]
          Length = 287

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/255 (38%), Positives = 141/255 (55%), Gaps = 6/255 (2%)

Query: 91  SQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           SQ+       A  ++K  E   FS + D WW   G ++ L  +N  R+  I   L R  R
Sbjct: 23  SQVKEAPSAPASDTVKKNE-RDFSKLRDQWWIPRGEFEVLSRMNELRVPLITDKL-RGHR 80

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-S 209
           K    A   +G +I+DVGCGGG+LSEPLAR+GA VTG+D V  NI  A+ HA  DP    
Sbjct: 81  KLEDPASTLKGFSIIDVGCGGGLLSEPLARLGANVTGLDIVPSNIAAAKDHASRDPSIRD 140

Query: 210 TIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
            I Y C   + + E+   +DA++ASEV+EHV D  EF ++ S +    G    +TINR++
Sbjct: 141 RINYICGDIKDIGEQ---YDALVASEVVEHVEDLDEFIRNCSRVVKPHGHLFFTTINRTL 197

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
            +   A I AE+I+H +P+G H W  F+TPEEL L L +    V E+ G +Y+P+ G W+
Sbjct: 198 LSLLVAKIGAEYIVHLVPRGLHDWQMFVTPEELQLKLAKHGCAVSEVKGMMYHPIGGYWT 257

Query: 330 LSDDISVNFIAFGTK 344
                 +N+     K
Sbjct: 258 WFGMDCINYALHAVK 272


>gi|407700225|ref|YP_006825012.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'Black Sea 11']
 gi|407249372|gb|AFT78557.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas macleodii
           str. 'Black Sea 11']
          Length = 234

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 143/241 (59%), Gaps = 15/241 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KFS +A  WWD EG +KPLH +NP RL FI       F K           
Sbjct: 2   TNVDQQEINKFSELASRWWDPEGEFKPLHLINPLRLDFINQHSEGLFDK----------- 50

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            +VD+GCGGGIL+E +AR GATVTG+D  E ++++A+LH  L+     ++Y C+TAE   
Sbjct: 51  KVVDIGCGGGILAESMARAGATVTGLDMAEASLEVAKLHG-LESGVK-VDYVCSTAEAFA 108

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E  + +FD V   E++EHV  PA    + + L    G    ST+NR++++Y   I+ AE+
Sbjct: 109 EANEGQFDVVTCMEMLEHVPAPASVVMACAKLVKPGGHVFFSTLNRNLKSYLMGIVGAEY 168

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFIA 340
           IL  +PKGTH  S F+ P EL+ +  +A +  ++M G   +P++  + LS +++ VN++ 
Sbjct: 169 ILKLVPKGTHDHSKFIKPSELMAMTDQAGLLPRDMTGLHMDPISQGFYLSANNVDVNYLL 228

Query: 341 F 341
           +
Sbjct: 229 Y 229


>gi|170086610|ref|XP_001874528.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649728|gb|EDR13969.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 285

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 142/242 (58%), Gaps = 11/242 (4%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK--DPYSA 156
           H++ +++   E+A FS ++  WWD +G +  LH +NP R+ FIR  L    R+  D    
Sbjct: 16  HTSNATVNADEIAHFSRLSSQWWDHQGEFSFLHKMNPVRVQFIRDKLLEIAREENDDLDI 75

Query: 157 RP---FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST--- 210
           +P      L+++DVGCGGG+LSE +AR+GA   G+DA E NI IA++HA  DP+ S    
Sbjct: 76  QPTHVLRDLDVLDVGCGGGLLSESVARLGARTHGVDASESNISIAKVHASADPKLSPPSP 135

Query: 211 -IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSM 269
            + Y  T+AE L+   +++D V + EV+EHV +PA F  + + L    G   +STI+R+ 
Sbjct: 136 FLSYEHTSAESLLTSPKRYDVVCSMEVLEHVDNPASFLSTCATLVKPGGHLFLSTISRTP 195

Query: 270 RAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWS 329
            AYA  I  AE +L  +  GTH +S F+ P EL+   Q    D K + G +YNPL  RW 
Sbjct: 196 LAYALTIFLAEDVLRKVSSGTHTYSKFIKPNELIEFFQNYR-DPK-VRGLIYNPLLARWH 253

Query: 330 LS 331
           L+
Sbjct: 254 LA 255


>gi|381402210|ref|ZP_09927086.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Kingella kingae
           PYKK081]
 gi|380832818|gb|EIC12710.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Kingella kingae
           PYKK081]
          Length = 238

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +AD WWD  G +KPLH +NP RL +I          D ++     G  ++DVG
Sbjct: 11  EIQKFSQLADKWWDKTGEFKPLHDINPLRLDYI----------DQFAQ--LSGKTVLDVG 58

Query: 169 CGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A+ GA +V GID  E +++ A  HA +  + S ++Y C + E L  E   
Sbjct: 59  CGGGILSESMAQRGAQSVLGIDMAELSLQTASAHA-IANQVSNVQYRCISVEDLAAEMPH 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DP    ++ + L    G    STINR+  +Y  AI+ AE++L+ +
Sbjct: 118 TFDVVSCMEMLEHVPDPESIIRACAKLVKPNGWVFFSTINRNPTSYIHAILGAEYLLNLV 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + + + +D+    G  YN LT R+ L D + VN++
Sbjct: 178 PKGTHDWQKFITPAELARMARHSGLDICATQGMSYNVLTKRYFLGDKVDVNYM 230


>gi|254472123|ref|ZP_05085523.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudovibrio sp.
           JE062]
 gi|211958406|gb|EEA93606.1| 3-demethylubiquinone-9 3-O-methyltransferase [Pseudovibrio sp.
           JE062]
          Length = 180

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 117/183 (63%), Gaps = 8/183 (4%)

Query: 165 VDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD---LDPETSTIEYCCTTAEKL 221
           +D+GCGGG+LSEP+ARMGATV G DA E NIK+A LHA    LD     I+Y   TAE L
Sbjct: 1   MDIGCGGGLLSEPMARMGATVVGADASETNIKVATLHAQQSGLD-----IDYRAQTAESL 55

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           VE   +FD V+  EV+EHVAD   F KS + L    G    +TINR+++AYA AI+AAE 
Sbjct: 56  VEAGEQFDIVLNMEVVEHVADVPLFMKSCADLVRPGGMMFTATINRTLKAYALAIVAAER 115

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAF 341
           +L WLPKGTHQ+   + P+EL   L  A + + E  G  +NPLT  WS + D+ VN++  
Sbjct: 116 VLRWLPKGTHQYEKLVRPKELEAPLNEAGMSIYERCGVSFNPLTDSWSRTTDLDVNYMVI 175

Query: 342 GTK 344
             K
Sbjct: 176 ARK 178


>gi|294648764|ref|ZP_06726222.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292825334|gb|EFF84079.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 237

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 133/236 (56%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L  EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLALEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DPA   ++   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPASIVQACQNLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMIGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|119774865|ref|YP_927605.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella amazonensis
           SB2B]
 gi|166201218|sp|A1S6C9.1|UBIG_SHEAM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|119767365|gb|ABL99935.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella amazonensis
           SB2B]
          Length = 237

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A TWWD +G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFEKMAATWWDPDGEFKPLHQLNPLRLNYIDQTSGGLFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK- 227
           CGGGILSE +AR+GA VTGID   + +++ARLHA     +   E C  TAE+  E  R+ 
Sbjct: 60  CGGGILSESMARLGANVTGIDMGNEPLEVARLHALETGVSLNYERC--TAEEHREVNREA 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP     +   +    G    STINR++R+Y   I+ AE++L  LP
Sbjct: 118 YDVVTCMEMLEHVPDPLSVIAACCDMVKPGGYVFFSTINRNLRSYVETILGAEYLLKMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            GTH    F+ P EL+ ++ +  +  K+  G  YNP+TG +  +  + VN++
Sbjct: 178 VGTHDHGKFIRPSELIAMVDQTELLCKDATGVTYNPITGTFRYTSSVEVNYM 229


>gi|92113981|ref|YP_573909.1| 3-demethylubiquinone-9 3-methyltransferase [Chromohalobacter
           salexigens DSM 3043]
 gi|91797071|gb|ABE59210.1| 3-demethylubiquinone-9 3-methyltransferase [Chromohalobacter
           salexigens DSM 3043]
          Length = 245

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 139/244 (56%), Gaps = 20/244 (8%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++  AE+AKF A+A  WWD E  +KPLH +NP RL FI                   G  
Sbjct: 8   NVDQAEIAKFEALASRWWDPESEFKPLHDINPLRLNFIDEQA------------NLAGKT 55

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIE--YCCTTAEKL 221
            +DVGCGGG+LSE +A  GA VTGID  E  + +ARLH     ETS ++  Y   +AE++
Sbjct: 56  AIDVGCGGGLLSEAMAHRGAHVTGIDMGEAPLAVARLHQ----ETSGVDVTYRQISAEEM 111

Query: 222 VEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
             E   +FD V   E++EHV DPA   ++ + L    G    STINR+ +AY  AI+ AE
Sbjct: 112 AAEHPGEFDVVTCLEMLEHVPDPAAVVRACATLVKPGGHLFFSTINRNPKAYLFAILGAE 171

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNFI 339
           ++L  LP+GTH +  F+ P EL    + A + V+   G  YNPLT R+ L+ +D+SVN++
Sbjct: 172 YVLQLLPRGTHTYRKFIRPAELSAWCRDAGLRVRRQTGLTYNPLTKRYRLTANDVSVNYM 231

Query: 340 AFGT 343
              T
Sbjct: 232 VHCT 235


>gi|300704761|ref|YP_003746364.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum CFBP2957]
 gi|299072425|emb|CBJ43770.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum CFBP2957]
          Length = 239

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S +            P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSVV------------PLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH  L+   +              E   
Sbjct: 59  GCGGGILSESMARAGADVKGIDLSRKALRVADLHG-LEAGVAVDYEEIAAEALAAREPDS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNP+TGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPITGRYALTYDTSVNYL 229


>gi|119475248|ref|ZP_01615601.1| 3-demethylubiquinone-9 3-methyltransferase [marine gamma
           proteobacterium HTCC2143]
 gi|119451451|gb|EAW32684.1| 3-demethylubiquinone-9 3-methyltransferase [marine gamma
           proteobacterium HTCC2143]
          Length = 241

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/236 (40%), Positives = 134/236 (56%), Gaps = 8/236 (3%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E  KF+ +A  WWD +G   PLH LN  R  F+   + +HF+         +GL I+D+G
Sbjct: 13  ETDKFNRLAVQWWDPQGLMWPLHRLNDMRAPFVTEKIQQHFK-----TVSLKGLRILDIG 67

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+E +A+ GATVTGID   KNI IAR HA    +   I+Y C   E L ++   F
Sbjct: 68  CGAGLLAERMAKQGATVTGIDVAAKNIGIARQHAQ--TQGLVIDYRCGAVEAL-KDVGDF 124

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V+  EVIEHV+D   F      LT + G   ++TINR+  ++ T I+ AE+IL WLP+
Sbjct: 125 DVVLNMEVIEHVSDLPLFMSRTCDLTGAGGLMFLATINRTWFSWLTTIVGAEYILGWLPR 184

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTH W  ++TPEE VL LQR  + V    G   +  +    L+ ++  N++   TK
Sbjct: 185 GTHTWQRYVTPEEAVLSLQRGGLSVLSRTGVGMSLWSRNLFLTGNMRANYMMVATK 240


>gi|410625440|ref|ZP_11336225.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola mesophila
           KMM 241]
 gi|410155036|dbj|GAC22994.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola mesophila
           KMM 241]
          Length = 239

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 143/243 (58%), Gaps = 15/243 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           ++  ++ H E+ KF+ +A  WWD  G +KPLH +NP R  +I            +  +  
Sbjct: 2   NSAQNVDHQEIQKFADLASRWWDLNGEFKPLHTINPLRTDYIV-----------HRTQGL 50

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
           EG  ++DVGCGGGIL+E +AR GA VTGID  E  +++ARLH+ L+ + S I+Y  +TAE
Sbjct: 51  EGKKVIDVGCGGGILAESMARSGAEVTGIDMGEAPLEVARLHS-LESQLS-IDYQLSTAE 108

Query: 220 KLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           +  +    +FD V   E++EHV DP+   ++ S L    G    STINR++++Y  AI+ 
Sbjct: 109 EFADAHTGQFDVVTCMEMLEHVPDPSSVVEACSRLVKPGGTVFFSTINRNIKSYLMAIVG 168

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AEHIL  +PK TH    F+ P EL+  +    +  K M G   +P+T ++ LSD ++ VN
Sbjct: 169 AEHILKLVPKDTHNHDKFIKPSELLNWVDNTPLVAKHMTGLHVSPITQQFYLSDKNVDVN 228

Query: 338 FIA 340
           +I 
Sbjct: 229 YIV 231


>gi|392308624|ref|ZP_10271158.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Pseudoalteromonas citrea NCIMB 1889]
          Length = 236

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 139/232 (59%), Gaps = 14/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  IA  WWD +G +KPLH +NP RL FI              ++   G  ++DVG
Sbjct: 11  EIAKFEEIAQQWWDTQGEFKPLHEINPLRLDFIND-----------KSQGLFGKTVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-RK 227
           CGGGIL+E +A++GA  TGID  ++ + +A+LH+ L+    T++Y    AE   E+   K
Sbjct: 60  CGGGILTESMAKLGANATGIDMGQEPLNVAKLHS-LEAGV-TVDYKKVPAETFAEQNPEK 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   K+++ L     +   ST+N++ +AY  AI+ AE IL  +P
Sbjct: 118 FDVVTCMEMLEHVPDPASIIKAVAQLAKPGASVFFSTLNKTTKAYLLAIVGAEKILKMVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH    F+ P  L+   ++ ++ V+  AG  YNP+   ++L++D+SVN+I
Sbjct: 178 EGTHDHDKFIRPSTLISWAEQHNLKVRASAGINYNPIGQTFTLTNDVSVNYI 229


>gi|389806386|ref|ZP_10203517.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           thiooxydans LCS2]
 gi|388445606|gb|EIM01670.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           thiooxydans LCS2]
          Length = 234

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/233 (39%), Positives = 140/233 (60%), Gaps = 15/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+A+F ++A  WWD +G  +PLH LNP R A++ +      R D        G  + DV
Sbjct: 9   AEIARFDSLAARWWDPDGESRPLHDLNPVRAAYVAA------RVD------LRGAKVADV 56

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQR 226
           GCGGG+LSE LAR GA VTGID   K I++A+LH  L      ++Y   ++ +L   E  
Sbjct: 57  GCGGGLLSEALARAGAKVTGIDLGGKVIEVAKLH--LHESGLAVDYRVQSSSELAAAEPA 114

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV   E++EHV DP      L+A+    G   +ST+NR+  A+  AI+ AE+++  L
Sbjct: 115 SFDAVCCMELVEHVPDPRALVNDLAAMVKPGGRLFMSTLNRTPAAFGAAIVGAEYLMRLL 174

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH ++ FL P EL  +L+ A +++++++G  YNPL+ +  LS   +VN++
Sbjct: 175 PRGTHHYAQFLKPSELGRLLRHAGLELEDVSGLAYNPLSRKAWLSSITAVNYV 227


>gi|345863455|ref|ZP_08815666.1| 3-demethylubiquinone-9 3-methyltransferase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
 gi|345878471|ref|ZP_08830183.1| acyltransferase [endosymbiont of Riftia pachyptila (vent Ph05)]
 gi|344224502|gb|EGV50893.1| acyltransferase [endosymbiont of Riftia pachyptila (vent Ph05)]
 gi|345125533|gb|EGW55402.1| 3-demethylubiquinone-9 3-methyltransferase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
          Length = 237

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 135/237 (56%), Gaps = 15/237 (6%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++ HAE++KF A+A  WWD    +KPLH +NP RL +I                   G  
Sbjct: 7   NVDHAEISKFEALASRWWDPHSEFKPLHEINPLRLGYIDQI------------AHLAGKE 54

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE 223
           ++DVGCGGGIL+E +A  GA VTGID  E  +++ARLH  L      + Y     E+L E
Sbjct: 55  VLDVGCGGGILAESMAERGAQVTGIDMGEAPLQVARLH--LFESGLEVNYERIPVERLAE 112

Query: 224 EQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHI 282
           E+   FD V   E++EHV DPA    + + L    G    ST+NR+ ++Y  AI+ AE++
Sbjct: 113 ERPAAFDVVTCMEMLEHVPDPASVINACARLVKPGGHVFFSTLNRNPKSYLFAIVGAEYL 172

Query: 283 LHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           L  LPKGTH ++ F+ P EL   ++ A ++  ++ G  YNPL  R+SL  D+ VN++
Sbjct: 173 LRLLPKGTHDFAKFIKPAELDRWIRAAGLETCDITGLSYNPLNQRYSLGSDVDVNYM 229


>gi|455738995|ref|YP_007505261.1| 3-demethylubiquinone-9 3-methyltransferase [Morganella morganii
           subsp. morganii KT]
 gi|455420558|gb|AGG30888.1| 3-demethylubiquinone-9 3-methyltransferase [Morganella morganii
           subsp. morganii KT]
          Length = 241

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/233 (41%), Positives = 140/233 (60%), Gaps = 14/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RLA+I+  +   F           G  ++DV
Sbjct: 15  AEIKKFEDVASRWWDLEGEFKPLHRINPLRLAYIQQRVNGVF-----------GKKVLDV 63

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL+E +AR GA VTG+D   + +++ARLHA L+  T  I Y   T E+  E+  +
Sbjct: 64  GCGGGILAESMAREGADVTGLDMGAEPLQVARLHA-LENGTD-ITYVQETVEQHAEKHAQ 121

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DPA   +S + L    G  V STINR+ +A+  A+IAAE+IL  +
Sbjct: 122 QYDVVACMEMLEHVPDPASVVRSCARLVKPGGDVVFSTINRNKKAWFMAVIAAEYILKMV 181

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH    F+ P EL+  L    +  + M G  YNPL+ ++ L+ ++ VN++
Sbjct: 182 PPGTHDAKKFIRPAELIDWLNNTGLREQHMIGLHYNPLSDKFWLAPNVDVNYM 234


>gi|297182858|gb|ADI19009.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [uncultured alpha proteobacterium HF0070_05I22]
          Length = 246

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 142/247 (57%), Gaps = 13/247 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSA----RP 158
           +++   E+  F+A++D WWD  GP   LHA  P R+ +I +++ R   K   SA    RP
Sbjct: 3   TTVDQREIDNFAALSDDWWDTRGPMALLHAFTPIRIDYILASIERFLPKKARSAAPALRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARL---HADLDPETSTIEYCC 215
             GL I+D+GCGGG+L+EP+AR+GAT+TGID  E  I  A      ADL      I Y C
Sbjct: 63  LTGLRILDIGCGGGLLAEPMARLGATMTGIDVTEAAISAATAHAKQADL-----AINYHC 117

Query: 216 TTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATA 275
           +TAEKL      FD + ASEVIEHVAD   F K+++++   +G  V++TINRS+ A   A
Sbjct: 118 STAEKLASMGVTFDVIYASEVIEHVADRGLFIKAIASMLDPKGVVVVTTINRSLPALLLA 177

Query: 276 IIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDIS 335
             A E+++  +P GTH    F+ P EL      A I + +M G    P  G +  + +++
Sbjct: 178 KFALEYVVRLVPAGTHDPRKFVQPNELRQEFAAAGIMLDDMTGLTPRP-DGSFKQTGNLA 236

Query: 336 VNFIAFG 342
           +N+ A G
Sbjct: 237 INYAASG 243


>gi|358638552|dbj|BAL25849.1| 3-demethylubiquinone-9 3-methyltransferase [Azoarcus sp. KH32C]
          Length = 233

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 130/233 (55%), Gaps = 15/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS +A  WWD    +KPLH +NP RL +I                   G  ++D+
Sbjct: 8   AELQKFSDLAHRWWDPTSEFKPLHEINPLRLRWIDQKAS------------LAGKRVLDI 55

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGGILSE +A +GATVTGID  EK + +ARLH  L      ++Y  T+AE    +   
Sbjct: 56  GCGGGILSESMAALGATVTGIDLSEKALGVARLH--LFESGLKVDYQHTSAEAFAAQNAG 113

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA    + + L    G    STINR+ +AY  A++ AE+IL  L
Sbjct: 114 SFDVVTCMEMLEHVPDPASTIAACAKLVRPGGHVFFSTINRNFKAYLFAVVGAEYILKLL 173

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH++  F+ P EL    + A ++  E+ G  YNP+   +SL  D  VN++
Sbjct: 174 PRGTHEYGKFIKPSELARYARDAGLETTELLGMSYNPIAKTYSLGQDTDVNYL 226


>gi|389793005|ref|ZP_10196184.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           fulvus Jip2]
 gi|388435359|gb|EIL92268.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rhodanobacter
           fulvus Jip2]
          Length = 246

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 142/233 (60%), Gaps = 15/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+A+F  +A  WWD +G  +PLH LNP R A+I        R +   A+      + DV
Sbjct: 21  AEIARFDTLASRWWDPDGESRPLHDLNPVRFAYIAE------RVELAQAK------VADV 68

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKLVEEQR 226
           GCGGG+LSE LAR GA VTGID  EK I+IA+LH  L     +++Y   ++AE    E  
Sbjct: 69  GCGGGLLSEALARAGARVTGIDLGEKVIEIAQLH--LHESALSVDYRVQSSAELAAAEPA 126

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FDAV   E+IEHV DPA     L+A+    G   +ST+NR+  A+  AI+ AE+++  L
Sbjct: 127 SFDAVCCMELIEHVPDPAALVADLAAMLKPGGQLFMSTLNRTPAAFGAAIVGAEYVMRML 186

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH ++ FL P EL  +L+++ +++++++G  YNPL  +  +S   ++N++
Sbjct: 187 PRGTHHYAHFLKPSELGRLLRQSGLELEDVSGLGYNPLARKAWISRFTAINYV 239


>gi|421464544|ref|ZP_15913234.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens WC-A-157]
 gi|400205297|gb|EJO36278.1| 3-demethylubiquinone-9 3-O-methyltransferase [Acinetobacter
           radioresistens WC-A-157]
          Length = 239

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 14/238 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL ++          D  S     G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWV----------DELSGG-LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           CGGGIL+E +AR GA  V G+D  E  + + RLHA  +     IEY     E+L EEQ  
Sbjct: 59  CGGGILTESMARRGAAEVLGVDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLAEEQAG 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L  L
Sbjct: 118 QYDIVTCMEMLEHVPDPASIIKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYLLRML 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PKGTH +  F+ P EL   ++ A +++K+M G  YNPLT  + L+ ++ VN++    K
Sbjct: 178 PKGTHDYHKFIRPSELAHDIRAAGLELKQMTGLHYNPLTKHYWLALNVDVNYMVHTVK 235


>gi|120598756|ref|YP_963330.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. W3-18-1]
 gi|166201223|sp|A1RJD1.1|UBIG_SHESW RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120558849|gb|ABM24776.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. W3-18-1]
          Length = 236

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 134/233 (57%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTTGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEE-QR 226
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA    ET   I Y   TAE   ++ Q 
Sbjct: 60  CGGGILSESMARIGAEVDGLDMGEEPLEVARLHA---LETGVNITYVKNTAEAHSQDHQG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV +P    K+   +    G    STINR++R+Y   I+ AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPNPQSVIKACCDMVKPGGFVFFSTINRNLRSYVETILGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 177 PVGTHDHNKFIKPSELIELVDNTDLICKDAVGITYNPLTGIFKYTPRVDVNYM 229


>gi|399544434|ref|YP_006557742.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter sp.
           BSs20148]
 gi|399159766|gb|AFP30329.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter sp.
           BSs20148]
          Length = 250

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 142/251 (56%), Gaps = 21/251 (8%)

Query: 96  NKKHSAPSSLKHA----ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRK 151
           N  H + S+L       E+AKF A+A  WWD    +KPLH +NP RL +I   +      
Sbjct: 5   NSDHPSDSNLNRNVDRNEIAKFEALASRWWDPTSEFKPLHDINPLRLNYIDERVS----- 59

Query: 152 DPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTI 211
                    G  ++D+GCGGG+LSE +AR GA VTGID  E  + +ARLH  L+     +
Sbjct: 60  -------LPGKKVIDIGCGGGLLSEGMARRGAHVTGIDMGEAPLSVARLHG-LESGVQ-V 110

Query: 212 EYCCTTAEKLVEEQR---KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRS 268
           +Y   T E+L  + +   ++D V   E++EHV DP    ++ ++L    G   +STINR+
Sbjct: 111 DYQKITVEELARDPQHAGQYDVVTCLEMLEHVPDPGSVIRACASLLKPGGHLFVSTINRN 170

Query: 269 MRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRW 328
            +++  AII AE++L  LPKGTH+W  F+ P E+   L+   +D++E+ G  YN LT  +
Sbjct: 171 PKSFLFAIIGAEYVLSLLPKGTHEWKKFIRPSEMSDHLRNVGLDIRELTGMTYNLLTKVY 230

Query: 329 SLSDDISVNFI 339
            L  ++ VN++
Sbjct: 231 KLGRNVDVNYM 241


>gi|386334121|ref|YP_006030292.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia solanacearum
           Po82]
 gi|334196571|gb|AEG69756.1| 3-demethylubiquinone-9 3-methyltransferase [Ralstonia solanacearum
           Po82]
          Length = 265

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 131/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  +VDV
Sbjct: 37  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSM------------APLAGKRVVDV 84

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH  L+   +              E   
Sbjct: 85  GCGGGILSESMARAGADVKGIDLSRKALRVADLHG-LEAGVAVDYEEIAAEALAAREPGS 143

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 144 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 203

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNP+TGR++L+ D SVN++
Sbjct: 204 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPITGRYALTHDTSVNYL 255


>gi|90021795|ref|YP_527622.1| 3-demethylubiquinone-9 3-methyltransferase [Saccharophagus
           degradans 2-40]
 gi|109895918|sp|Q21IR9.1|UBIG_SACD2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|89951395|gb|ABD81410.1| 3-demethylubiquinone-9 3-methyltransferase [Saccharophagus
           degradans 2-40]
          Length = 236

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/239 (39%), Positives = 143/239 (59%), Gaps = 16/239 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+AKF  +A  WWD EG +KPLH LNP R  +I        +K            ++DV
Sbjct: 11  AEIAKFERLAARWWDLEGEFKPLHDLNPLRANYIDERAQVAEKK------------LLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           GCGGGIL E +A+ GA VTGID  +  +++A+LH+ L+   + ++Y  TTAE+   +  +
Sbjct: 59  GCGGGILCEAMAQRGAIVTGIDMGDAPLEVAKLHS-LESGVN-VDYIKTTAEEFAAKHPQ 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV DPA+   + + L    G    STINR+ +AY  A++ AE++L  L
Sbjct: 117 SYDVVTCLEMLEHVPDPAQTIAACAQLVKPGGDIFFSTINRNPKAYLFAVVGAEYVLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL-SDDISVNFIAFGTK 344
           PKGTH ++ F+ P EL   ++ A ++++EM G  YNP+T  + L + D+SVN+I    K
Sbjct: 177 PKGTHDYNKFIRPSELAQWMRNAGLELQEMCGMTYNPITKHYKLNAKDVSVNYIMHARK 235


>gi|300692124|ref|YP_003753119.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase [Ralstonia solanacearum PSI07]
 gi|299079184|emb|CBJ51852.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum PSI07]
 gi|344170745|emb|CCA83172.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [blood disease
           bacterium R229]
          Length = 238

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 131/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  +VD+
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSM------------APLAGKRVVDI 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH  L+   +              E   
Sbjct: 59  GCGGGILSESMARAGANVKGIDLSRKALRVADLHG-LEAGVAVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNP+TGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPMTGRYALTHDTSVNYL 229


>gi|120555406|ref|YP_959757.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter aquaeolei
           VT8]
 gi|259563541|sp|A1U3K1.1|UBIG_MARAV RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120325255|gb|ABM19570.1| 3-demethylubiquinone-9 3-methyltransferase [Marinobacter aquaeolei
           VT8]
          Length = 238

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 138/234 (58%), Gaps = 17/234 (7%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    +KPLH +NP RL +I   +               G   +DVG
Sbjct: 10  EIAKFEALASRWWDPTSEFKPLHDINPLRLNYIDERVS------------LAGKRALDVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV---EEQ 225
           CGGG+LSE +A  GA VTGID  E  + +A+LH  L+     ++Y  TT E+L    E  
Sbjct: 58  CGGGLLSEGMALRGAHVTGIDMGEAPLSVAKLHG-LESGVK-VDYRQTTIEELARDPEHA 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ +++    G   +STINR+ +++  AI+ AE++L+ 
Sbjct: 116 GQYDVVTCLEMLEHVPDPASVIRACASMLKPGGHMFVSTINRNPKSFLFAIVGAEYVLNL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH+W  F+ P E+   L+ A ++V+E+ G  YNP+T  + L  D+ VN++
Sbjct: 176 LPKGTHEWKKFIRPSEMSDHLRHAGLEVRELTGMTYNPITKVYKLGRDVDVNYL 229


>gi|146293167|ref|YP_001183591.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|386313696|ref|YP_006009861.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase, UbiG [Shewanella putrefaciens 200]
 gi|166201221|sp|A4Y759.1|UBIG_SHEPC RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|145564857|gb|ABP75792.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|319426321|gb|ADV54395.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase, UbiG [Shewanella putrefaciens 200]
          Length = 236

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 134/233 (57%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEE-QR 226
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA    ET   I Y   TAE   ++ Q 
Sbjct: 60  CGGGILSESMARIGAEVDGLDMGEEPLEVARLHA---LETGVNITYVKNTAEAHSQDHQG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV +P    K+   +    G    STINR++R+Y   I+ AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPNPQSVIKACCDMVKPGGFVFFSTINRNLRSYVETILGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 177 PVGTHDHNKFIKPSELIELVDNTDLICKDAVGITYNPLTGIFKYTPRVDVNYM 229


>gi|71731487|gb|EAO33549.1| Ubiquinone biosynthesis O-methyltransferase [Xylella fastidiosa
           Ann-1]
          Length = 246

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 135/236 (57%), Gaps = 15/236 (6%)

Query: 106 KHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIV 165
           + +EL KF+A    WWD  GP KPLHALNP RL +I   +               G  ++
Sbjct: 13  RQSELDKFAAFTSGWWDPHGPQKPLHALNPVRLDYISKRVS------------LSGARVL 60

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ 225
           DVGCGGG+LSE LAR GA VT ID   + IK+ARLH  L+     ++Y     E L+ EQ
Sbjct: 61  DVGCGGGLLSEALARQGAHVTAIDLAPELIKVARLHG-LESGIQ-VDYRIQAIEDLLAEQ 118

Query: 226 -RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++ 
Sbjct: 119 PAPFDAIACMEMLEHVPDPAAIVDACARLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVR 178

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct: 179 LLPKGTHQYKDFIRPAELASWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234


>gi|299066865|emb|CBJ38060.1| bifunctional: 3-demethylubiquinone-9 3-methyltransferase;
           2-octaprenyl-6-hydroxy phenol methylase [Ralstonia
           solanacearum CMR15]
          Length = 238

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I++              P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQAM------------APLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH+ L+   +              E   
Sbjct: 59  GCGGGILSESMARAGANVKGIDLSRKALRVADLHS-LEAGVAVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    ST++R+ +AY  A+I AE+IL+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVRACATLVKPGGHVFFSTLHRNAKAYLLAVIGAEYILNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNPLTGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPLTGRYALTHDTSVNYL 229


>gi|293395208|ref|ZP_06639494.1| 3-demethylubiquinone-9 3-O-methyltransferase [Serratia odorifera
           DSM 4582]
 gi|291422385|gb|EFE95628.1| 3-demethylubiquinone-9 3-O-methyltransferase [Serratia odorifera
           DSM 4582]
          Length = 241

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 140/247 (56%), Gaps = 14/247 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +  S   ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F K   
Sbjct: 2   NAESSSRAQNVDHQEIAKFEAVASRWWDLEGEFKPLHRINPLRLNYIMQRAGGIFDK--- 58

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                    ++DVGCGGGIL+E +AR GA VTG+D   + +++ARLHA L+     + Y 
Sbjct: 59  --------QVLDVGCGGGILAESMAREGARVTGLDMGAEPLQVARLHA-LESGVD-VTYV 108

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E       +++D V   E++EHV DPA   ++ + L    G    STINR+ +A+ 
Sbjct: 109 QETVESHAHANPQQYDVVTCMEMLEHVPDPASVVRACAHLVKPGGHVFFSTINRNTKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A+I AE++L  +P+GTH  + F+ P EL+  +   S+  K M G  YNP+T R+ L  +
Sbjct: 169 MAVIGAEYVLKMVPQGTHDRNKFIKPSELISWVDGTSLREKHMIGLHYNPITDRFKLGRN 228

Query: 334 ISVNFIA 340
           + VN++ 
Sbjct: 229 VDVNYMV 235


>gi|114047555|ref|YP_738105.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. MR-7]
 gi|122944661|sp|Q0HV07.1|UBIG_SHESR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|113888997|gb|ABI43048.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sp. MR-7]
          Length = 236

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 136/233 (58%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD  G +KPLH LNP RL +I  T    F K            ++DVG
Sbjct: 11  EIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGK-----------KVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKLVEEQRK 227
           CGGGILSE +AR+GA V G+D  E+ +++ARLHA    ET  +I Y   TAE   E+ R+
Sbjct: 60  CGGGILSESMARIGAIVHGLDMGEEPLEVARLHA---LETGVSINYVKNTAEAHREDHRE 116

Query: 228 F-DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           + D V   E++EHV DP    ++   +    G    STINR+++++   II AE++L  L
Sbjct: 117 YYDVVTCMEMLEHVPDPLSVIQACCDMVKPGGFVFFSTINRNIKSFVETIIGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ ++    +  K+  G  YNPLTG +  +  + VN++
Sbjct: 177 PIGTHDHNKFIKPSELMALVDNTDLLCKDALGITYNPLTGIFKYTPKVDVNYM 229


>gi|261253082|ref|ZP_05945655.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio orientalis CIP
           102891 = ATCC 33934]
 gi|417954869|ref|ZP_12597899.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio
           orientalis CIP 102891 = ATCC 33934]
 gi|260936473|gb|EEX92462.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio orientalis CIP
           102891 = ATCC 33934]
 gi|342814577|gb|EGU49517.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio
           orientalis CIP 102891 = ATCC 33934]
          Length = 235

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 12/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF  +A  WWD EG +KPLH +NP RL ++             +A    G  ++DVG
Sbjct: 11  EIKKFEDMASRWWDLEGEFKPLHQINPLRLNYVLD-----------NAGGLFGKTVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CGGGIL+E +A+ GA VTG+D  ++ +++ARLHA L+  T      CT  +  VE   K+
Sbjct: 60  CGGGILAESMAKEGAIVTGLDMGKEPLEVARLHA-LETGTKLTYIQCTIEDHAVENAGKY 118

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V   E++EHV DP    KS +AL    G    ST+NR++++Y  AI+ AE +L  +P+
Sbjct: 119 DVVTCMEMLEHVPDPLSVIKSCAALVKPGGHVFFSTLNRNLKSYLFAIVGAEKLLKIVPE 178

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           GTH    F+ P EL+ ++    +    + G  YNPLT  + L  ++ VN+I    K
Sbjct: 179 GTHDHDKFIRPAELIKMIDHTDLTETGITGLHYNPLTDTYKLGSNVDVNYIVHTQK 234


>gi|319944282|ref|ZP_08018558.1| 3-demethylubiquinone-9 3-methyltransferase [Lautropia mirabilis
           ATCC 51599]
 gi|319742577|gb|EFV94988.1| 3-demethylubiquinone-9 3-methyltransferase [Lautropia mirabilis
           ATCC 51599]
          Length = 253

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 147/244 (60%), Gaps = 15/244 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           SA +++  AEL KF A+A  WWD +  +KPLH +NP RL +I             +    
Sbjct: 16  SAAANVDQAELDKFQALASRWWDPDSEFKPLHDINPLRLEWIVQQ----------AGGSL 65

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVT-GIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            G N+VDVGCGGGIL+E LA+ GA  T G+D  +K++++ARLHA L+   +  +Y     
Sbjct: 66  SGRNVVDVGCGGGILTEALAKAGAATTLGVDLADKSLQVARLHA-LE-SGAPAKYEKIAV 123

Query: 219 EKLVEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
           E L   Q   FD V+  E++EHV DPA   ++ + L    G  ++ST+NR+ ++Y  AI+
Sbjct: 124 EDLAARQPGHFDVVVCMEMLEHVPDPASAIRACADLAKPGGTVLLSTLNRNPKSYLFAIV 183

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISV 336
            AE++L  LP+GTH +  F+ P EL  + ++A ++++   G  YNP+T ++ L+  D+ V
Sbjct: 184 GAEYVLKLLPRGTHSFDKFIRPAELARMARQAGLELQGFMGLTYNPVTQQYRLNPHDVGV 243

Query: 337 NFIA 340
           N++A
Sbjct: 244 NYMA 247


>gi|66560294|ref|XP_395548.2| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Apis mellifera]
          Length = 286

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 135/238 (56%), Gaps = 2/238 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   ++  FS + + WWD  G  +PLHALNP R+  IR  L     K      P EG+
Sbjct: 38  STVDLTDIDHFSKLHNKWWDVNGEIRPLHALNPLRIQLIRDGLANIGVKIECPYLPLEGI 97

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKL 221
            I+DVGCGGG+LSE LAR+GA VTGIDA  + I  A+ HA LD      + Y  T  E  
Sbjct: 98  KILDVGCGGGLLSESLARIGADVTGIDASSELITAAKQHAVLDASLDGKLNYFQTIIEDF 157

Query: 222 -VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            +  +  ++AV+ASEVIEHV +   F K   +     G+  ++TIN+++ ++   IIAAE
Sbjct: 158 ALNNKEVYNAVVASEVIEHVNNKELFLKCCISSLKPGGSIFLTTINKTLPSWLGGIIAAE 217

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
            IL  +PKGTH W+ F+TP E+  +L+      K + G  YN L   WS     ++N+
Sbjct: 218 RILKVVPKGTHDWNKFVTPTEMQSLLETYGCKTKLIHGMFYNILKNEWSWMASTAINY 275


>gi|56475930|ref|YP_157519.1| 3-demethylubiquinone-9 3-methyltransferase [Aromatoleum aromaticum
           EbN1]
 gi|81358433|sp|Q5P7U3.1|UBIG_AROAE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|56311973|emb|CAI06618.1| 3-demethylubiquinone-9 3-methyltransferase [Aromatoleum aromaticum
           EbN1]
          Length = 234

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 131/233 (56%), Gaps = 15/233 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AEL KFS +A  WWD    +KPLH +NP RL +I                   G  ++D+
Sbjct: 8   AELQKFSELAHRWWDTTSEFKPLHEINPLRLDWIDRN------------AGLAGKRVLDI 55

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGGILSE +A  GA VTGID  EK + +ARLH  L      ++Y   +AE+   +   
Sbjct: 56  GCGGGILSESMAAAGAHVTGIDLSEKALGVARLH--LFESGQKVDYHHASAEEFAAQHAG 113

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DPA    + + L    G    STINR+ +AY  A++ AE+IL  L
Sbjct: 114 EFDIVTCMEMLEHVPDPASTVAACAQLVRPGGQVFFSTINRNFKAYLFAVLGAEYILKLL 173

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH +  F+ P EL    ++A ++  E+ G  YNPLT  +SL +D  VN++
Sbjct: 174 PRGTHDYVKFIRPSELARYCRQAGLETAELLGMSYNPLTQVYSLGNDTDVNYL 226


>gi|380018767|ref|XP_003693294.1| PREDICTED: hexaprenyldihydroxybenzoate methyltransferase,
           mitochondrial-like [Apis florea]
          Length = 286

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/238 (39%), Positives = 135/238 (56%), Gaps = 2/238 (0%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++   ++  FS + + WWD  G  +PLHALNP R+  IR  L     K      P EG+
Sbjct: 38  STVDLTDIDHFSKLHNKWWDVNGEIRPLHALNPLRIQLIRDGLANIGVKIECPYLPLEGI 97

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPET-STIEYCCTTAEKL 221
            I+DVGCGGG+LSE LAR+GA VTGIDA  + I  A+ HA LD      + Y  T  E  
Sbjct: 98  KILDVGCGGGLLSESLARIGADVTGIDASSELITAAKQHAVLDASLDGKLNYFQTIIEDF 157

Query: 222 VEEQRK-FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
               ++ ++AV+ASEVIEHV +   F K   +     G+  ++TIN+++ ++   IIAAE
Sbjct: 158 ALNNKEIYNAVVASEVIEHVNNKELFLKCCISSLKPGGSIFLTTINKTLPSWLGGIIAAE 217

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
            IL  +PKGTH W+ F+TP E+  +L+      K + G  YN L   WS     ++N+
Sbjct: 218 RILKVVPKGTHDWNKFVTPTEMQSLLETYGCKTKLIHGMFYNVLKNEWSWMASTAINY 275


>gi|109898786|ref|YP_662041.1| ubiquinone biosynthesis O-methyltransferase [Pseudoalteromonas
           atlantica T6c]
 gi|109701067|gb|ABG40987.1| 3-demethylubiquinone-9 3-methyltransferase [Pseudoalteromonas
           atlantica T6c]
          Length = 253

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 144/247 (58%), Gaps = 15/247 (6%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           ++  ++  ++ H E+ KF+ +A  WWD  G +KPLH +NP R  +I              
Sbjct: 12  DRNMNSAQNVDHQEIQKFADLASRWWDLNGEFKPLHTINPLRTDYIVQ-----------R 60

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
            +  EG  ++DVGCGGGIL+E +AR GA V+GID  E  +++ARLH+ L+ + S I+Y  
Sbjct: 61  TQGLEGKKVIDVGCGGGILAESMARAGAEVSGIDMGEAPLEVARLHS-LESQLS-IDYQL 118

Query: 216 TTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
           +TAE+  +    +FD V   E++EHV DP+   ++ S L    G    ST+NR++++Y  
Sbjct: 119 STAEEFADAHPGQFDVVTCMEMLEHVPDPSSVVEACSRLVKPGGTVFFSTLNRNIKSYLM 178

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-D 333
           AI+ AEHIL  +PK TH    F+ P EL+  +    +  K M G   NP+T ++ LSD +
Sbjct: 179 AIVGAEHILKLVPKETHNHDKFIKPSELLNWVDNTPLMAKHMTGLHVNPITQQFYLSDKN 238

Query: 334 ISVNFIA 340
           + VN+I 
Sbjct: 239 VDVNYIV 245


>gi|387814820|ref|YP_005430307.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|302608184|emb|CBW44441.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|381339837|emb|CCG95884.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
          Length = 238

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 138/234 (58%), Gaps = 17/234 (7%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    +KPLH +NP RL +I   +               G   +DVG
Sbjct: 10  EIAKFEALASRWWDPTSEFKPLHDINPLRLNYIDERVS------------LAGKRALDVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV---EEQ 225
           CGGG+LSE +A  GA VTGID  E  + +A+LH  L+     ++Y  TT E+L    E  
Sbjct: 58  CGGGLLSEGMALRGAHVTGIDMGEAPLSVAKLHG-LESGVK-VDYRQTTIEELARDPEHA 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            ++D V   E++EHV DPA   ++ +++    G   +STINR+ +++  AI+ AE++L+ 
Sbjct: 116 GQYDVVTCLEMLEHVPDPASVIRACASMLKPGGHLFVSTINRNPKSFLFAIVGAEYVLNL 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH+W  F+ P E+   L+ A ++V+E+ G  YNP+T  + L  D+ VN++
Sbjct: 176 LPKGTHEWKKFIRPSEMSDHLRHAGLEVRELTGMTYNPITKVYKLGRDVDVNYL 229


>gi|421899410|ref|ZP_16329775.1| 3-demethylubiquinone-9 3-methyltransferase (3,
           4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (dhhb methyltransferase) protein [Ralstonia solanacearum
           MolK2]
 gi|206590616|emb|CAQ37578.1| 3-demethylubiquinone-9 3-methyltransferase (3,
           4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (dhhb methyltransferase) protein [Ralstonia solanacearum
           MolK2]
          Length = 239

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 131/232 (56%), Gaps = 13/232 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
            EL KFS +A  WWD    +KPLH +NP RL +I+S              P  G  +VDV
Sbjct: 11  GELEKFSELAHRWWDPNSEFKPLHEINPLRLDWIQSM------------APLAGKRVVDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGILSE +AR GA V GID   K +++A LH  L+   +              E   
Sbjct: 59  GCGGGILSESMARAGADVKGIDLSRKALRVADLHG-LEAGVAVDYEEIAAEALAAREPGS 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E++EHV DPA   ++ + L    G    STI+R+ +AY  A+I AE++L+ LP
Sbjct: 118 FDVVTCMEMLEHVPDPASVVQACATLVKPGGHVFFSTIHRNAKAYLLAVIGAEYVLNMLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +GTH ++ F+ P EL    + A ++  ++ G  YNP+TGR++L+ D SVN++
Sbjct: 178 RGTHDYAKFIRPSELAGFARTAGLEPAQLRGLEYNPITGRYALTHDTSVNYL 229


>gi|251792153|ref|YP_003006873.1| 3-demethylubiquinone-9 3-methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|422337860|ref|ZP_16418829.1| 3-demethylubiquinone-9 3-methyltransferase [Aggregatibacter
           aphrophilus F0387]
 gi|247533540|gb|ACS96786.1| 3-demethylubiquinone-9 3-O-methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|353344866|gb|EHB89166.1| 3-demethylubiquinone-9 3-methyltransferase [Aggregatibacter
           aphrophilus F0387]
          Length = 251

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 142/253 (56%), Gaps = 30/253 (11%)

Query: 104 SLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLN 163
           ++   E+ KF  +A +WWD  G +KP+H LNP RL +I              A    G  
Sbjct: 2   NVDQQEIDKFEKMAISWWDPNGDFKPIHQLNPLRLNYILQ-----------QADGLTGKR 50

Query: 164 IVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHAD-----LDPETSTIEYCCTTA 218
           ++DVGCGGGIL+E +A+ GA VTGID     + +A+ HA+     +D +  TIE  C   
Sbjct: 51  VLDVGCGGGILAESMAKQGAFVTGIDMSSAPLAVAKTHAEEQGLKIDYQQITIEQLC--- 107

Query: 219 EKLVEEQRK-----------FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINR 267
           E ++++Q             FD +   E++EHV +PA   ++ + L    G    STINR
Sbjct: 108 ENILQKQTALLTENESAEFGFDVITCMEMLEHVPNPASIIENCARLLKPNGVLFFSTINR 167

Query: 268 SMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGR 327
           +++A+A  ++ AE++L  LPKGTH +  F+ P EL+    +  ++  EM G+ YNPL+G 
Sbjct: 168 TLKAWALVVLGAEYVLKMLPKGTHDYDKFIQPAELLAWTDKVGLECVEMVGYHYNPLSGN 227

Query: 328 WSLSDDISVNFIA 340
           + L++D+S N++A
Sbjct: 228 FWLNNDVSANYMA 240


>gi|254481915|ref|ZP_05095158.1| 3-demethylubiquinone-9 3-O-methyltransferase [marine gamma
           proteobacterium HTCC2148]
 gi|214038044|gb|EEB78708.1| 3-demethylubiquinone-9 3-O-methyltransferase [marine gamma
           proteobacterium HTCC2148]
          Length = 236

 Score =  178 bits (451), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 99/244 (40%), Positives = 145/244 (59%), Gaps = 16/244 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++  AE+AKF A+A  WWD    +KPLH +NP R  +I          D YS  P  G 
Sbjct: 5   ANVDPAEIAKFEAMASRWWDRNSEFKPLHDINPLRANYI----------DRYS--PVSGQ 52

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKL- 221
            +VDVGCGGGIL+E +A+ GA VTGID  E  + +A+LH  L+   + ++Y  +TAE+L 
Sbjct: 53  RLVDVGCGGGILAEAMAQRGAKVTGIDMGEAPLAVAKLH-QLE-SGADVDYFQSTAEELA 110

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           V+    FD V   E++EHV DP    K+ + +     A   STINR+ +A+  AI+ AEH
Sbjct: 111 VKAPASFDIVCCLEMLEHVPDPGAVIKACADMAKPGAALYFSTINRNPKAFMFAIVGAEH 170

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFIA 340
           IL  LP GTH++  F+ P EL   ++ A + +++M G  YNP+T  + L+  D+SVN++ 
Sbjct: 171 ILRLLPAGTHEYDKFIKPSELAGWIRDAGLVLEDMTGLTYNPITRTYRLNPRDVSVNYMV 230

Query: 341 FGTK 344
              K
Sbjct: 231 HTVK 234


>gi|406915787|gb|EKD54836.1| hypothetical protein ACD_60C00041G0027 [uncultured bacterium]
          Length = 230

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 15/238 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+AKFS  A  WWD  G +K LH +NP RL +I+       ++            ++D+
Sbjct: 7   SEIAKFSDSAHHWWDFHGEFKALHDINPLRLQYIQQKTSLAHKE------------VIDI 54

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGGIL+E +A  GA VTGID  E+ I +A+LH         I Y  TTAE++ ++Q  
Sbjct: 55  GCGGGILTESMATAGAHVTGIDMSEEAINVAKLHQH--ENHLQINYQLTTAEEMADKQHA 112

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV DP    ++ + L    G    ST+NR+M++Y  AII AE++L  L
Sbjct: 113 HYDIVTCLELLEHVPDPLSIIQACADLAKPNGDLFFSTLNRNMKSYLFAIIGAEYLLKLL 172

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTK 344
           PK TH ++ F+ P EL    ++A + V +M G  YNPLT  + L+ D+SVN++    K
Sbjct: 173 PKNTHDFAKFIRPSELNAWARKAHLQVIDMIGIAYNPLTKTYFLTKDVSVNYMVHMKK 230


>gi|149374310|ref|ZP_01892084.1| ubiquinone biosynthesis O-methyltransferase [Marinobacter algicola
           DG893]
 gi|149361013|gb|EDM49463.1| ubiquinone biosynthesis O-methyltransferase [Marinobacter algicola
           DG893]
          Length = 242

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 136/235 (57%), Gaps = 19/235 (8%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I                P  G   +DVG
Sbjct: 10  EIAKFEALASRWWDPTSEFRPLHDINPLRLNYIDERA------------PLAGKRALDVG 57

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQR- 226
           CGGG+LSE +A  GA VTGID  E  + +ARLH     E+   ++Y   T E+L ++   
Sbjct: 58  CGGGLLSEGMALRGAHVTGIDMGEAPLSVARLHG---MESGIEVDYRQITVEELAQDPEH 114

Query: 227 --KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
             ++D V   E++EHV DPA    + + +    G   +STINR+ +++  AI+ AE++L 
Sbjct: 115 AGQYDVVTCLEMLEHVPDPASVISACATMLKPGGHLFVSTINRNPKSFLFAIVGAEYMLR 174

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
            LPKGTH+W  F+ P E+   L+ AS+D++++ G  YNP+T  + L  D+ VN++
Sbjct: 175 LLPKGTHEWRKFIRPSEMSDHLRHASLDIRDLTGMTYNPITKTYRLGRDVDVNYM 229


>gi|451813012|ref|YP_007449465.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
 gi|451778981|gb|AGF49861.1| 3-demethylubiquinone-9 3-methyltransferase [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
          Length = 241

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 146/241 (60%), Gaps = 15/241 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++ H+E+ KF+ +A+ WWD  G  K LH +N  RL +I   L              +  
Sbjct: 10  TNVYHSEIDKFNRMAEEWWDKSGNMKTLHEINILRLDWILRLLT-----------DIKNK 58

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
           +I+D+GCGGGILSE LA +GA VTGID  +  IKIA  H+        + Y   +AE+L 
Sbjct: 59  SILDIGCGGGILSESLAALGAEVTGIDLADNLIKIANSHSS--KNFIDVNYRNISAEELS 116

Query: 223 E-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
             E+  +D ++  E++EHV +PA   KS S+L    G+   STINR+++++  +II AE+
Sbjct: 117 RTEKNSYDVIVCMEMLEHVPEPASIIKSCSSLVKDGGSVFFSTINRNLKSFIFSIIGAEY 176

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIA 340
           IL  LP GTH++  F+ P ELV   +  ++++ ++ G  YNP+ G++ LSD+++VN FI+
Sbjct: 177 ILKLLPVGTHKYELFIKPSELVNQARMFNLELMDLVGLSYNPINGKFYLSDNVNVNYFIS 236

Query: 341 F 341
           F
Sbjct: 237 F 237


>gi|321443574|gb|EFX60137.1| hypothetical protein DAPPUDRAFT_125375 [Daphnia pulex]
          Length = 216

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 128/210 (60%), Gaps = 4/210 (1%)

Query: 103 SSLKHAELAKFSAIADTWWDAEG--PYKPLHALNPTRLAFIRSTLCRHFRK--DPYSARP 158
           +++   E++KF+  A  WW  +       LH LNP R+ +IR  + ++F    +  SA P
Sbjct: 7   TTVNAGEVSKFTRAAKDWWKPQSNTGVGLLHQLNPIRVRYIREQVIQNFHLPIESDSAWP 66

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
            +G  ++DVGCGGGILSE LAR+GAT+T +D    NI+ A+ HA  D ET+ I Y C TA
Sbjct: 67  LKGKQVLDVGCGGGILSESLARLGATMTSVDPGAANIEAAKQHALTDDETAEINYLCATA 126

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E L ++++ FD V A EV+EHV D  +F   L+ L    G   +STINRS  AY T I+A
Sbjct: 127 EDLCKQEKTFDIVCALEVVEHVDDVPKFIHQLTQLVKPNGLLFMSTINRSALAYLTTIVA 186

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQR 308
            E IL  +P GTH W+ ++ P+EL  +L +
Sbjct: 187 VEQILQLVPNGTHDWNKYIQPQELTGMLTQ 216


>gi|148557396|ref|YP_001264978.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas wittichii
           RW1]
 gi|148502586|gb|ABQ70840.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas wittichii
           RW1]
          Length = 244

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/231 (42%), Positives = 133/231 (57%), Gaps = 6/231 (2%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E A F  +A  WWD +G    LH LNP RL  IR+T+   +   P   RP  G    DVG
Sbjct: 15  EAAHFGKLAAEWWDPKGSSAMLHKLNPPRLRHIRATIEAQWGIGPEMLRPLTGRRAADVG 74

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKF 228
           CG G+L+EPLARMGA VTGIDA  +N+ +AR HA    +  TI+Y     E L  E   F
Sbjct: 75  CGAGLLAEPLARMGAAVTGIDAAPENVAVARHHA--KKQGLTIDYRAGGVEVLAGES--F 130

Query: 229 DAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPK 288
           D V + EVIEHVADPA F   L+ L   +G  ++ST NR+  +    I  AE  L  +PK
Sbjct: 131 DLVTSMEVIEHVADPAAFVARLAGLLAPDGIMILSTPNRTPLSKLAMITVAEG-LGMVPK 189

Query: 289 GTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           GTH W  F+TPEEL   ++ A + V +  G  ++P  G + LSD++++++ 
Sbjct: 190 GTHDWRKFVTPEELAAHVEAAGLRVIDRKGLGFSPAAG-FHLSDNLALDYF 239


>gi|386035802|ref|YP_005955715.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae KCTC 2242]
 gi|424831593|ref|ZP_18256321.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|449052094|ref|ZP_21732174.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae hvKP1]
 gi|339762930|gb|AEJ99150.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae KCTC 2242]
 gi|414709028|emb|CCN30732.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|448876047|gb|EMB11047.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae hvKP1]
          Length = 242

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 139/245 (56%), Gaps = 12/245 (4%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K S   ++ HAE+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKTSVAPNVDHAEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+         
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGAEPLQVARLHA-LESGIQVNYVQ 109

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
            T  E   +  +++D V   E++EHV DP     + + L    G    STINR+ +A+  
Sbjct: 110 ETVEEHAAKHPQQYDVVTCMEMLEHVPDPQSVVHACARLVKPGGQVFFSTINRNGKAWLM 169

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A++ AE+++  +PKGTH    F+ P EL+  + + ++  + + G  YNPLT  + L+  +
Sbjct: 170 AVVGAEYVMKMVPKGTHDVKKFIKPAELLGWVDQTTLKEQHIIGLHYNPLTNTFKLAPGV 229

Query: 335 SVNFI 339
            VN++
Sbjct: 230 DVNYM 234


>gi|410630758|ref|ZP_11341445.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola arctica
           BSs20135]
 gi|410149724|dbj|GAC18312.1| 3-demethylubiquinone-9 3-methyltransferase [Glaciecola arctica
           BSs20135]
          Length = 238

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/240 (40%), Positives = 140/240 (58%), Gaps = 17/240 (7%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
            ++ H E+ KFS +A  WWD  G +KPLH +NP R  +I+         D  S +     
Sbjct: 5   QNVDHNEIQKFSELASRWWDLAGEFKPLHQINPLRTDYIQQ------HCDGLSDK----- 53

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETS-TIEYCCTTAEKL 221
            ++DVGCGGGIL+E +AR GA VTGID  E  ++IARLH     E+  T++Y  TTAE  
Sbjct: 54  KVLDVGCGGGILAESMARHGAQVTGIDMGEAPLEIARLHG---LESGLTVDYQQTTAEDF 110

Query: 222 VEE-QRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAE 280
            ++ Q +FD V   E++EHV DP+    +   L    G    ST+NR++++Y  AI+ AE
Sbjct: 111 ADKYQAQFDVVTCMEMLEHVPDPSSVVNACYRLVKPGGHVFFSTLNRNIKSYLMAIVGAE 170

Query: 281 HILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVNFI 339
           +IL  +PKGTHQ   F+ P EL+  +    + V+ M G   NP++  + LSD ++ VN+I
Sbjct: 171 YILGLVPKGTHQHDKFIKPSELISWIDDTQLLVQRMIGLHMNPISQEYYLSDQNVDVNYI 230


>gi|343504516|ref|ZP_08742227.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio ichthyoenteri
           ATCC 700023]
 gi|342811374|gb|EGU46417.1| 3-demethylubiquinone-9 3-methyltransferase [Vibrio ichthyoenteri
           ATCC 700023]
          Length = 237

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 16/235 (6%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           +E+ KF  +A  WWD EG +KPLH +NP RL ++              A    G  ++DV
Sbjct: 10  SEIKKFEEMASRWWDLEGEFKPLHQINPLRLNYVME-----------CADGLFGKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEK-LVEEQ 225
           GCGGGIL+E +AR GA VTG+D  ++ +++ARLHA    ET T ++Y  +T E   VE  
Sbjct: 59  GCGGGILAESMAREGAIVTGLDMGKEPLEVARLHA---LETGTKLDYIRSTIEDHAVEHA 115

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
             +D V   E++EHV DP    +S +AL   +G    ST+NR++++Y  AI+ AE +L  
Sbjct: 116 GTYDVVTCMEMLEHVPDPLSVIRSCAALVKPDGHVFFSTLNRNIKSYLFAIVGAEKLLKI 175

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
           +P GTH    F+ P E++ ++ +  +    + G  YNPLTGR+ L  ++ VN+I 
Sbjct: 176 VPDGTHDHEKFIRPSEMIKMIDQTDLIELGITGLHYNPLTGRYKLGQNVDVNYIV 230


>gi|152971179|ref|YP_001336288.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895768|ref|YP_002920504.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|262043283|ref|ZP_06016414.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330000609|ref|ZP_08303752.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella sp. MS
           92-3]
 gi|365137341|ref|ZP_09344060.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella sp.
           4_1_44FAA]
 gi|378979866|ref|YP_005228007.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|402779729|ref|YP_006635275.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae 1084]
 gi|419972753|ref|ZP_14488180.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH1]
 gi|419977568|ref|ZP_14492867.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH2]
 gi|419983316|ref|ZP_14498467.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH4]
 gi|419989435|ref|ZP_14504411.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH5]
 gi|419995474|ref|ZP_14510280.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH6]
 gi|420001614|ref|ZP_14516269.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH7]
 gi|420006482|ref|ZP_14520979.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH8]
 gi|420012302|ref|ZP_14526616.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH9]
 gi|420018081|ref|ZP_14532279.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH10]
 gi|420023831|ref|ZP_14537846.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH11]
 gi|420031872|ref|ZP_14545691.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH12]
 gi|420037046|ref|ZP_14550703.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH14]
 gi|420040994|ref|ZP_14554492.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH16]
 gi|420046755|ref|ZP_14560074.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH17]
 gi|420052465|ref|ZP_14565646.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH18]
 gi|420060347|ref|ZP_14573347.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH19]
 gi|420063925|ref|ZP_14576736.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH20]
 gi|420069855|ref|ZP_14582509.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH21]
 gi|420075399|ref|ZP_14587875.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH22]
 gi|420081160|ref|ZP_14593470.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH23]
 gi|421909549|ref|ZP_16339359.1| 3-demethylubiquinol 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K26BO]
 gi|421916884|ref|ZP_16346448.1| 3-demethylubiquinol 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K28BO]
 gi|424932506|ref|ZP_18350878.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
 gi|425075674|ref|ZP_18478777.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW1]
 gi|425082484|ref|ZP_18485581.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW2]
 gi|425086310|ref|ZP_18489403.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW3]
 gi|425092562|ref|ZP_18495647.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW5]
 gi|428150294|ref|ZP_18998076.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
 gi|428933834|ref|ZP_19007375.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae JHCK1]
 gi|428941011|ref|ZP_19014074.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae VA360]
 gi|166234767|sp|A6TBT7.1|UBIG_KLEP7 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|150956028|gb|ABR78058.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238548086|dbj|BAH64437.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259039382|gb|EEW40522.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328537951|gb|EGF64130.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella sp. MS
           92-3]
 gi|363656205|gb|EHL94975.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella sp.
           4_1_44FAA]
 gi|364519277|gb|AEW62405.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae HS11286]
 gi|397350150|gb|EJJ43240.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH1]
 gi|397353909|gb|EJJ46976.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH2]
 gi|397355487|gb|EJJ48486.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH4]
 gi|397367241|gb|EJJ59853.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH6]
 gi|397369558|gb|EJJ62158.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH5]
 gi|397371938|gb|EJJ64446.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH7]
 gi|397382191|gb|EJJ74354.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH9]
 gi|397386145|gb|EJJ78231.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH8]
 gi|397390796|gb|EJJ82694.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH10]
 gi|397399375|gb|EJJ91029.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH12]
 gi|397400067|gb|EJJ91713.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH11]
 gi|397406062|gb|EJJ97500.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH14]
 gi|397418528|gb|EJK09686.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH17]
 gi|397419312|gb|EJK10461.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH16]
 gi|397425367|gb|EJK16246.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH18]
 gi|397433639|gb|EJK24283.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH19]
 gi|397434484|gb|EJK25119.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH20]
 gi|397442449|gb|EJK32800.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH21]
 gi|397448492|gb|EJK38666.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH22]
 gi|397453465|gb|EJK43525.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae subsp. pneumoniae KPNIH23]
 gi|402540665|gb|AFQ64814.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae 1084]
 gi|405594074|gb|EKB67497.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW1]
 gi|405600736|gb|EKB73901.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW2]
 gi|405605225|gb|EKB78291.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW3]
 gi|405611788|gb|EKB84554.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae WGLW5]
 gi|407806693|gb|EKF77944.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
 gi|410116451|emb|CCM81984.1| 3-demethylubiquinol 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K26BO]
 gi|410120601|emb|CCM89073.1| 3-demethylubiquinol 3-O-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST258-K28BO]
 gi|426301210|gb|EKV63459.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae VA360]
 gi|426304275|gb|EKV66423.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Klebsiella
           pneumoniae JHCK1]
 gi|427539738|emb|CCM94214.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
          Length = 242

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 139/245 (56%), Gaps = 12/245 (4%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K S   ++ HAE+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKTSVAPNVDHAEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+         
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGAEPLQVARLHA-LESGIQVDYVQ 109

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
            T  E   +  +++D V   E++EHV DP     + + L    G    STINR+ +A+  
Sbjct: 110 ETVEEHAAKHPQQYDVVTCMEMLEHVPDPQSVVHACARLVKPGGQVFFSTINRNGKAWLM 169

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A++ AE+++  +PKGTH    F+ P EL+  + + ++  + + G  YNPLT  + L+  +
Sbjct: 170 AVVGAEYVMKMVPKGTHDVKKFIKPAELLGWVDQTTLKEQHIIGLHYNPLTNTFKLAPGV 229

Query: 335 SVNFI 339
            VN++
Sbjct: 230 DVNYM 234


>gi|379712706|ref|YP_005301045.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           philipii str. 364D]
 gi|376329351|gb|AFB26588.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           philipii str. 364D]
          Length = 289

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 146/285 (51%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLC----RHFRKDPY---- 154
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +     RH  K  Y    
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 155 ------------------SAR-----PFE-----------GLNIVDVGCGGGILSEPLAR 180
                             S+R     P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLIHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A  +     I Y  +T E+L E  + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAKANG--VKINYLQSTIEEL-ESDKLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
           A+  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ANVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I+++E+ G VY+     W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTKIEIQELKGLVYDLAKNEWKLSDDIDVNYFMCLGRK 283


>gi|359781488|ref|ZP_09284712.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           psychrotolerans L19]
 gi|359370552|gb|EHK71119.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           psychrotolerans L19]
          Length = 232

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 23/242 (9%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ +AE+AKF A+A  WWD E  +KPLH +NP R+ +I          D ++     G 
Sbjct: 2   SNVDNAEIAKFEALAYRWWDRESEFKPLHDINPLRVNWI----------DQHAG--LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKL 221
            ++DVGCGGGILSE +A+ GA VTGID  E  + +ARLH     E+   +EY   T E  
Sbjct: 50  KVLDVGCGGGILSEAMAQRGAQVTGIDMAEAPLAVARLH---QLESGVPVEYIQETTE-- 104

Query: 222 VEEQRK----FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAII 277
            +  RK    +D V   E++EHV DP+   K+   L    G    STINR+ +AY  AI+
Sbjct: 105 -DHARKHAGTYDVVTCLEMLEHVPDPSSVIKACHDLVKPGGQVFFSTINRNPKAYLFAIV 163

Query: 278 AAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN 337
            AE++L  LP+GTH +  F+ P EL    + A ++++++ G  YNPLT R+ L  D++VN
Sbjct: 164 GAEYVLRLLPRGTHDFRKFIRPSELGAWARAAGLNLRDVIGLTYNPLTKRYKLEGDVTVN 223

Query: 338 FI 339
           ++
Sbjct: 224 YM 225


>gi|392421517|ref|YP_006458121.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri CCUG 29243]
 gi|390983705|gb|AFM33698.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Pseudomonas
           stutzeri CCUG 29243]
          Length = 232

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/238 (40%), Positives = 135/238 (56%), Gaps = 15/238 (6%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           S++ HAE+AKF A+A  WWD E  +KPLH +NP R+ +I   +               G 
Sbjct: 2   SNVDHAEIAKFEALAHRWWDRESEFKPLHEINPLRVNWIDEHIA------------LAGK 49

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEY-CCTTAEKL 221
            ++D+GCGGGILSE +A+ GA V GID  E  + +ARLH  L      I+Y   T     
Sbjct: 50  KVIDIGCGGGILSEAMAQRGAQVIGIDMGEAPLSVARLH--LLESGLEIDYRQITAEAMA 107

Query: 222 VEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
            E   +FD V   E++EHV DPA   ++  AL    G    STINR+ +AYA AII AE+
Sbjct: 108 EEAPEQFDVVTCLEMLEHVPDPASVIQACCALVKPGGQVFFSTINRNPKAYAFAIIGAEY 167

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           +L  L +GTH +  F+ P EL    + A + VK++ G  YNPLT  + L+ D+ VN++
Sbjct: 168 VLQLLSRGTHDFKKFIRPSELGAWSRDAGLAVKDIIGLTYNPLTKHYKLAADVDVNYM 225


>gi|167623964|ref|YP_001674258.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|189037627|sp|B0TT38.1|UBIG_SHEHH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|167353986|gb|ABZ76599.1| ubiquinone biosynthesis O-methyltransferase [Shewanella
           halifaxensis HAW-EB4]
          Length = 236

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 137/240 (57%), Gaps = 16/240 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A TWWD EG +KPLH LNP RL +I       F K            ++DVG
Sbjct: 11  EIAKFEKMAATWWDPEGEFKPLHNLNPLRLNYIDQIAGGIFGK-----------QVLDVG 59

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAEKLVEEQR- 226
           CGGGILSE +A++GA VTG+D  ++ + +ARLHA    ET   I Y   TAE   +E R 
Sbjct: 60  CGGGILSESMAKIGAQVTGLDMGDEPLDVARLHA---IETGVLINYVKNTAEAHRDEHRG 116

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV +P+   ++ + +    G    STINR++RAY   I+ AE++L  L
Sbjct: 117 QYDVVTCMEMLEHVPNPSSVIQACADMVKPGGFVFFSTINRNIRAYVETILGAEYLLKML 176

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKNS 346
           P GTH  + F+ P EL+ +  +A +   +  G  YNP+T  +  +  + VN++    KN 
Sbjct: 177 PVGTHDHNKFIKPSELIDLADKAELFCSDAVGITYNPITDIFRYTKSLEVNYMIATVKND 236


>gi|349700140|ref|ZP_08901769.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase
           [Gluconacetobacter europaeus LMG 18494]
          Length = 249

 Score =  177 bits (450), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/253 (40%), Positives = 140/253 (55%), Gaps = 21/253 (8%)

Query: 97  KKHSAP----SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF--- 149
           + H +P     S+   E+A FS +A  WWD  GP +PLHA+N  R  +      RH    
Sbjct: 2   QHHDSPVLSADSVAPEEIAHFSDLAARWWDPAGPMRPLHAMNDLRTGWA----MRHLPAP 57

Query: 150 RKDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP--- 206
           + D  + R      ++D+GCG G+ SE  AR G  VTG+DA +  I  ARLH    P   
Sbjct: 58  QADDGARR-----TLLDIGCGAGLASEAFARAGFDVTGLDASQAAITAARLHMRHHPLPR 112

Query: 207 ETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTIN 266
               + Y C +AE+LV E  +FDA+ A EVIEHV DPA F + L ++    GA V+ST+N
Sbjct: 113 SAGPLFYRCGSAEELVAEGARFDAISALEVIEHVTDPAAFLRMLGSMLRPGGAMVVSTMN 172

Query: 267 RSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTG 326
           R+ R+ A A I AE++L  LP GTH W  F+TP E+      A + + ++AG V  P  G
Sbjct: 173 RTWRSMAMAKIGAEYVLRLLPVGTHDWRKFITPAEMGRYAAHAGLRITDIAGMV--PGLG 230

Query: 327 RWSLSDDISVNFI 339
            W  S D +VN+I
Sbjct: 231 GWRESRDTAVNYI 243


>gi|409081415|gb|EKM81774.1| hypothetical protein AGABI1DRAFT_118851 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 307

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/277 (36%), Positives = 144/277 (51%), Gaps = 42/277 (15%)

Query: 97  KKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKD---P 153
           ++ S  +S+   E++ FS+++  WWD  G ++ LH +NP R+ F+R  L    R D   P
Sbjct: 7   RRLSTAASVNAQEISHFSSLSAHWWDEHGEFQYLHKMNPVRMDFLRHKLLESARDDGADP 66

Query: 154 YSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDP--ETSTI 211
             AR   GLN+VDVGCGGG+LSE LAR+GA   GIDA E+NI IAR HA  DP  E S++
Sbjct: 67  DPARVLAGLNVVDVGCGGGLLSESLARLGANTLGIDASEQNIGIARQHASTDPKLEPSSL 126

Query: 212 EYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRA 271
            Y  TTAE L++  ++FD V + EV+EHV +PA F  + + L    G   +STI+R+  A
Sbjct: 127 LYQHTTAEALLKRPKRFDVVCSMEVLEHVDNPASFLSTCAELLNPGGHLFLSTISRTPLA 186

Query: 272 YATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVK----------------- 314
           Y   I  A+ +L  +  GTH +  ++ P EL+   +  S                     
Sbjct: 187 YFLTIFMAQDVLRKVSPGTHTYDKYIKPTELIQFFKSYSSPTPQAPIIEGEPVSLAESLK 246

Query: 315 --------------------EMAGFVYNPLTGRWSLS 331
                               E+ G +YNPL G W L+
Sbjct: 247 TSARPWITSHSASYIPRTQAEVRGLIYNPLFGDWLLA 283


>gi|91793304|ref|YP_562955.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella
           denitrificans OS217]
 gi|91715306|gb|ABE55232.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella
           denitrificans OS217]
          Length = 242

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 138/245 (56%), Gaps = 14/245 (5%)

Query: 96  NKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYS 155
           N  H+  +++  AE+AKF A+A +WWD  G +KPLH LNP RL +I ST    F K    
Sbjct: 3   NDTHTTQANVDPAEIAKFEAMAQSWWDPNGEFKPLHQLNPLRLNYIDSTAGGIFAK---- 58

Query: 156 ARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCC 215
                   ++DVGCGGGILSE +A++GA V GID  E  +++ARLHA L+     + Y  
Sbjct: 59  -------KVLDVGCGGGILSESMAKLGANVDGIDMGEAPLEVARLHA-LESGV-MVNYHK 109

Query: 216 TTAE-KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
           TTAE         +  V   E++EHV DP    ++   +    G    STINR+M +Y  
Sbjct: 110 TTAEAHSASHANHYQVVTCMEMLEHVPDPQSVIQACCDMVEPGGFVFFSTINRNMLSYVQ 169

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE++L  LP GTH  S F+ P EL+ ++    +  K+  G  +NPLT  +S +  +
Sbjct: 170 AILGAEYLLKLLPIGTHDHSKFIRPSELMAMVDNTDLICKDALGISFNPLTSIFSYTKSL 229

Query: 335 SVNFI 339
            VN++
Sbjct: 230 EVNYM 234


>gi|425072009|ref|ZP_18475115.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           WGLW4]
 gi|404597812|gb|EKA98305.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           WGLW4]
          Length = 245

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/248 (37%), Positives = 145/248 (58%), Gaps = 16/248 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+K  S  +++   E+ KF ++A  WWD EG +KPLH +NP RL +I+            
Sbjct: 2   NDKTTSLHANVDQHEIDKFESVASRWWDLEGEFKPLHRINPLRLNYIQE----------- 50

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
            A    G  ++DVGCGGGILSE +AR+GA VTG+D  ++ +++ARLH+    ET   + Y
Sbjct: 51  RADGLFGKKVLDVGCGGGILSESMARVGAEVTGLDMGKEPLEVARLHS---LETGIPVTY 107

Query: 214 CCTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              T E    E  +++D V   E++EHV DP+   +S + L    G    STINR+ +A+
Sbjct: 108 IQDTVENHATEYPQRYDVVTCMEMLEHVPDPSSIVRSCAKLVKPGGHVFFSTINRNKKAW 167

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
              ++ AE+IL+ +PKGTH  + F+ P EL+  +   ++  K M G  YNP+T ++ L+ 
Sbjct: 168 FMLVVGAEYILNMVPKGTHDANKFIRPSELLSWVDETNLRSKNMIGLHYNPITDKFRLAP 227

Query: 333 DISVNFIA 340
           ++ VN++ 
Sbjct: 228 NVDVNYMV 235


>gi|78485534|ref|YP_391459.1| 3-demethylubiquinone-9 3-methyltransferase [Thiomicrospira
           crunogena XCL-2]
 gi|109895924|sp|Q31GD8.1|UBIG_THICR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|78363820|gb|ABB41785.1| 3-demethylubiquinone-9 3-methyltransferase [Thiomicrospira
           crunogena XCL-2]
          Length = 241

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 139/249 (55%), Gaps = 17/249 (6%)

Query: 91  SQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
           SQ + NK  +A  S    EL  F+ +A+TWWD  G +  LH +NP R+ FI+        
Sbjct: 2   SQADLNKHKNADPS----ELNNFNQLANTWWDESGEFGALHKINPLRIEFIKQF------ 51

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
                 +  E   I+DVGCGGGILSE LA+ G  VTGID  E  + IARLH+ LD ET  
Sbjct: 52  ------QSIENKTILDVGCGGGILSESLAKAGGNVTGIDLAEDVLTIARLHS-LDTETKV 104

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
             +  +  +     + ++D V   E++EHV DPA    + +      G    ST+NR+ +
Sbjct: 105 NYHLISAEDHAQTHEEEYDIVTCMEMLEHVPDPASIIHAAAKAVKPGGWVFFSTLNRNYK 164

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           +Y  AI AAE +L+ +PKGTH    F+ P EL  + ++A + +KE AG  +NPL  R+ L
Sbjct: 165 SYLLAIFAAEQVLNLVPKGTHTHDKFIQPSELDAMARQAGLFLKEGAGIDFNPLLKRYRL 224

Query: 331 SDDISVNFI 339
           +D + VN++
Sbjct: 225 TDRLDVNYL 233


>gi|311278800|ref|YP_003941031.1| ubiquinone biosynthesis O-methyltransferase [Enterobacter cloacae
           SCF1]
 gi|308747995|gb|ADO47747.1| ubiquinone biosynthesis O-methyltransferase [Enterobacter cloacae
           SCF1]
          Length = 241

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD EG +KPLH +NP RL +I S            A    G  ++DVG
Sbjct: 15  EIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAS-----------RAEGLFGKKVLDVG 63

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEYCCTTAE-KLVEEQR 226
           CGGGIL+E +AR GATVTG+D   + +++ARLHA    ET   ++Y   T E    +   
Sbjct: 64  CGGGILAESMAREGATVTGLDMGFEPLQVARLHA---LETGIQVDYVQETVEAHAAQHPH 120

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           ++D V   E++EHV DP    K+ + L    G    ST+NR+ +++  A++ AE+IL  +
Sbjct: 121 QYDVVTCMEMLEHVPDPESVVKACAQLVKPGGHVFFSTLNRNGKSWLMAVVGAEYILRMV 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH    F+ P EL+  + R  +  + M G  YNPLT R+ L+  + VN++
Sbjct: 181 PKGTHDVKKFIKPAELLGWVDRTVLREQHMTGLHYNPLTDRFKLAPGVDVNYM 233


>gi|410863345|ref|YP_006978579.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Alteromonas macleodii AltDE1]
 gi|410820607|gb|AFV87224.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase
           [Alteromonas macleodii AltDE1]
          Length = 250

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 140/245 (57%), Gaps = 4/245 (1%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           +  K +  S+    E+A+F A+AD+WWD  G YK     N  RL  I++ L  HF K   
Sbjct: 3   DKSKKTGNSNFSEEEIARFDALADSWWDPSGKYKTALEFNRARLTVIKTQLENHFGKGNL 62

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
               +  L+I+D+G GGG++SEPLA +GA VTGIDA   ++++A+ HA        +EY 
Sbjct: 63  PPD-YSALSIIDIGSGGGLISEPLAALGAKVTGIDASSVSVEVAKRHAL--KSGVDVEYK 119

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
              + + V   +++D VI +EV+EHV D  +     ++L    G  +++T+NR++++Y  
Sbjct: 120 HMLSSEAVMTGQQYDVVINAEVVEHVPDQRQLINECASLVKPGGLLILATLNRTIKSYVI 179

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           AI+ AE+++ +LP GTH W  F+ P+EL   +   S  +K   G   NP  G W  +  +
Sbjct: 180 AIVGAEYVMRYLPVGTHDWRKFVKPQELQAWVGD-SFALKHQTGMRLNPFKGEWLTTPSL 238

Query: 335 SVNFI 339
           SVNFI
Sbjct: 239 SVNFI 243


>gi|157964768|ref|YP_001499592.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia massiliae
           MTU5]
 gi|157844544|gb|ABV85045.1| Ubiquinone biosynthesis O-methyltransferase [Rickettsia massiliae
           MTU5]
          Length = 289

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/285 (36%), Positives = 144/285 (50%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYRKEF 61

Query: 150 --------------RKDPYS--------ARPFEG-------LNIVDVGCGGGILSEPLAR 180
                         R+D  S        A  FE        L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNTQHSTAAYIEVREDASSGLTHKLPLAVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A        I Y  +T E+L E  + +D V+  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAK--ENGVKINYLQSTIEEL-ESDKLYDVVLCLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
            +  +F  +L       G  +ISTINR+ +AY   II AE+IL W+ K TH +S FL P 
Sbjct: 179 ENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVQKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I++KE+ G VY+P    W LSDDI VN F+  G K
Sbjct: 239 EIYEMLTDTEIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRK 283


>gi|226952290|ref|ZP_03822754.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. ATCC 27244]
 gi|226836956|gb|EEH69339.1| 3-demethylubiquinone-9 3-methyltransferase and
           2-octaprenyl-6-hydroxy phenol methylase [Acinetobacter
           sp. ATCC 27244]
          Length = 237

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 132/236 (55%), Gaps = 13/236 (5%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF A+A  WWD    ++PLH +NP RL +I   +               G  ++DVG
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERVGG-----------LAGKKVLDVG 58

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR-K 227
           CGGGIL+E +AR GA V GID  E  + + RLHA  +     IEY     E+L  EQ  +
Sbjct: 59  CGGGILAESMARRGADVLGIDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLALEQAGQ 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    ++   L    G    STINR+ ++Y  AII AE++L  LP
Sbjct: 118 YDVVTCMEMMEHVPDPVSIVQACQNLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRLLP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
           KGTH +  F+ P E+   ++ A + +KEM G  YNP+T  + L+ ++ VN++   T
Sbjct: 178 KGTHDYHKFIRPSEMAHDIRNAGLTLKEMIGLHYNPITKHYWLAPNVDVNYMVHTT 233


>gi|157375441|ref|YP_001474041.1| 3-demethylubiquinone-9 3-methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|157317815|gb|ABV36913.1| 3-demethylubiquinone-9 3-O-methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 241

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 137/233 (58%), Gaps = 16/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+AKF  +A+TWWD EG +KPLH LNP RL +I  T    F           G  I+DVG
Sbjct: 15  EIAKFEKMAETWWDPEGEFKPLHKLNPLRLNYIDQTSGGVF-----------GKRILDVG 63

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHA-DLDPETSTIEYCCTTAEKLVEEQRK 227
           CGGGILSE +AR+GA V G+D   + + +ARLHA ++D E   + Y   TAE   E  R+
Sbjct: 64  CGGGILSESMARIGAIVDGLDMGTEPLDVARLHALEMDVE---VNYIQDTAESHRETHRE 120

Query: 228 -FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            +D V   E++EHV  P    ++ + +    G    STINR++RAY   I+ AE++L  L
Sbjct: 121 TYDIVTCMEMLEHVPSPRSVVQACADMVKPGGYVFFSTINRNIRAYVETILGAEYLLKML 180

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P GTH  + F+ P EL+ + + A +  ++  G  YNP+T  ++ + ++ VN++
Sbjct: 181 PVGTHDHNKFIKPSELISLAEHAELFCEDATGISYNPITETFTYTKNVDVNYM 233


>gi|261340636|ref|ZP_05968494.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317049|gb|EFC55987.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 242

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 143/254 (56%), Gaps = 15/254 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKSPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+     +EY 
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHA-LESGVQ-VEYV 108

Query: 215 CTTAE-KLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E    E   ++D V   E++EHV DP     + + L    G    STINR+ +A+ 
Sbjct: 109 QETVEAHAAEHAHQYDVVTCMEMLEHVPDPQSVVNACAKLVKPGGQVFFSTINRNGKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE++L  +PKGTH    F+ P EL+  + +  +  + + G  YNPLT ++ L+  
Sbjct: 169 MAVVGAEYVLRMVPKGTHDVKKFIKPAELLGWVDQTWLKEQHITGLHYNPLTDKFKLAPG 228

Query: 334 ISVNFIAFGT-KNS 346
           + VN++   T KNS
Sbjct: 229 VDVNYMLHTTAKNS 242


>gi|338708440|ref|YP_004662641.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
           subsp. pomaceae ATCC 29192]
 gi|336295244|gb|AEI38351.1| ubiquinone biosynthesis O-methyltransferase [Zymomonas mobilis
           subsp. pomaceae ATCC 29192]
          Length = 266

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 145/256 (56%), Gaps = 6/256 (2%)

Query: 91  SQLNNNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFR 150
            QL + K     S++   +   F  +A+ WW+  G    LH +NP RL++IRS + RHF 
Sbjct: 14  GQLTDKKNEEGMSTIDRHQAEHFGKMAEEWWNPFGSSAMLHRMNPARLSYIRSAVDRHFS 73

Query: 151 KDPYSARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST 210
           +   + +P  G   +D+GCG G+L+EPL R+GA VTG+DA  +NI +A+ HA  D +   
Sbjct: 74  RVIDNIKPLSGKKALDIGCGAGLLAEPLTRLGADVTGMDAAAENIAVAKQHA--DQQNLK 131

Query: 211 IEYCCTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMR 270
           I Y     E L  E  +FD + A EV+EHVADP EF   ++     +G  ++ST NR++ 
Sbjct: 132 INYLTGGMESLGRE--RFDLITAMEVLEHVADPQEFINEIADKLKEDGLLILSTPNRTLL 189

Query: 271 AYATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSL 330
           +    I   E  L  +P GTH W+ FL PEE    ++ A + +  + G +++P+ G + L
Sbjct: 190 SRLMIIDIGE-TLGGIPTGTHDWNRFLKPEETQHFMENAGLRITHIMGLIWSPIRG-FIL 247

Query: 331 SDDISVNFIAFGTKNS 346
           +++ +V+++    KN+
Sbjct: 248 TENKAVDYLLTAQKNN 263


>gi|197285592|ref|YP_002151464.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           HI4320]
 gi|227356092|ref|ZP_03840482.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis ATCC
           29906]
 gi|425068526|ref|ZP_18471642.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           WGLW6]
 gi|226725553|sp|B4EZ30.1|UBIG_PROMH RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|194683079|emb|CAR43608.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           HI4320]
 gi|227163737|gb|EEI48649.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis ATCC
           29906]
 gi|404599358|gb|EKA99813.1| 3-demethylubiquinone-9 3-methyltransferase [Proteus mirabilis
           WGLW6]
          Length = 245

 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 92/248 (37%), Positives = 145/248 (58%), Gaps = 16/248 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N+K  S  +++   E+ KF ++A  WWD EG +KPLH +NP RL +I+            
Sbjct: 2   NDKTTSLHANVDQHEIDKFESVASRWWDLEGEFKPLHRINPLRLNYIQE----------- 50

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
            A    G  ++DVGCGGGILSE +AR+GA VTG+D  ++ +++ARLH+    ET   + Y
Sbjct: 51  RADGLFGKKVLDVGCGGGILSESMARVGAEVTGLDMGKEPLEVARLHS---LETGIPVTY 107

Query: 214 CCTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              T E    E  +++D V   E++EHV DP+   +S + L    G    STINR+ +A+
Sbjct: 108 IQDTVENHAAEYPQRYDVVTCMEMLEHVPDPSSIVRSCAKLVKPGGHVFFSTINRNKKAW 167

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
              ++ AE+IL+ +PKGTH  + F+ P EL+  +   ++  K M G  YNP+T ++ L+ 
Sbjct: 168 FMLVVGAEYILNMVPKGTHDANKFIRPSELLSWVDETNLRSKNMIGLHYNPITDKFRLAP 227

Query: 333 DISVNFIA 340
           ++ VN++ 
Sbjct: 228 NVDVNYMV 235


>gi|384081922|ref|ZP_09993097.1| 3-demethylubiquinone-9 3-methyltransferase [gamma proteobacterium
           HIMB30]
          Length = 234

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/232 (41%), Positives = 143/232 (61%), Gaps = 16/232 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KF+ IA ++WD EGP + +H +NP R+ F  S              P +   ++DVG
Sbjct: 9   EVTKFNQIARSYWDPEGPMRAVHQINPLRIDFTESFY------------PLQDAKVLDVG 56

Query: 169 CGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVE-EQRK 227
           CGGG+ SE +A+ G +VT IDA  + +K A+LHA L+   S I+Y  + AE  V   Q  
Sbjct: 57  CGGGLASETIAKRGGSVTAIDASPEMLKTAKLHA-LESGLS-IDYVESHAEAFVRSHQAV 114

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           FD V   E+IEHV +P E  K+L+AL    G  ++STINR+ +AY  A+IAAE+IL+W+P
Sbjct: 115 FDVVTCFEMIEHVPEPMETLKALAALVRPGGWLILSTINRTPKAYLGAVIAAEYILNWVP 174

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLS-DDISVNF 338
           KGTH+++ FL P EL   L+   +D++ + G VY PL  +++ S  D+ +N+
Sbjct: 175 KGTHEYARFLKPSELANGLRPHGLDIESIEGVVYQPLYQQFTRSTKDLDMNY 226


>gi|397164880|ref|ZP_10488335.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           radicincitans DSM 16656]
 gi|396094028|gb|EJI91583.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           radicincitans DSM 16656]
          Length = 242

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 138/245 (56%), Gaps = 12/245 (4%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K  A  ++ HAE+AKF A+A  WWD EG +KPLH +NP RL +I             
Sbjct: 2   NAEKTLAAQNVDHAEIAKFEAVASRWWDKEGEFKPLHRINPLRLGYISE----------- 50

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
            A    G  ++DVGCGGGIL+E +A+ GATVTG+D   + +++AR+HA L+         
Sbjct: 51  HAGGLFGKKVLDVGCGGGILAESMAQEGATVTGLDMGFEPLQVARMHA-LESGVQVDYVQ 109

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
            T  E   +  +++D V   E++EHV DP    K+ + L    G    STINR+ +++  
Sbjct: 110 ETVEEHAAKHAQQYDVVTCMEMLEHVPDPQSVVKACAQLVKPGGHVFFSTINRNGKSWLM 169

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A++ AE++L  +PKGTH    F+ P EL+  +    +  + + G  YNPL  +++L   +
Sbjct: 170 AVVGAEYVLRMVPKGTHDVKKFIKPAELLTWIDETVLQERHITGLHYNPLLNKFTLGPGV 229

Query: 335 SVNFI 339
            VN++
Sbjct: 230 DVNYM 234


>gi|334124901|ref|ZP_08498896.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           hormaechei ATCC 49162]
 gi|333387972|gb|EGK59163.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enterobacter
           hormaechei ATCC 49162]
          Length = 242

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 140/246 (56%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKSPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+     +EY 
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHA-LESGVQ-VEYV 108

Query: 215 CTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+   +   ++D V   E++EHV DP     + + L    G    STINR+ +A+ 
Sbjct: 109 QETVEEHAAKHAHQYDVVTCMEMLEHVPDPQSVVSACAKLVKPGGQVFFSTINRNGKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE++L  +PKGTH    F+ P EL+  + +  +  + M G  YNPLT ++ L+  
Sbjct: 169 MAVVGAEYVLRMVPKGTHDVKKFIKPAELLGWVDQTWLKEQHMTGLHYNPLTDKFKLAPG 228

Query: 334 ISVNFI 339
           + VN++
Sbjct: 229 VDVNYM 234


>gi|157828817|ref|YP_001495059.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165933543|ref|YP_001650332.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Iowa]
 gi|378721640|ref|YP_005286527.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Colombia]
 gi|378722987|ref|YP_005287873.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Arizona]
 gi|378724340|ref|YP_005289224.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Hauke]
 gi|379016115|ref|YP_005292350.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Brazil]
 gi|379018125|ref|YP_005294360.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Hino]
 gi|157801298|gb|ABV76551.1| 3-demethylubiquinone-9 3-methyltransferase [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165908630|gb|ABY72926.1| 3-demethylubiquinone 3-methyltransferase [Rickettsia rickettsii
           str. Iowa]
 gi|376324639|gb|AFB21879.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Brazil]
 gi|376326664|gb|AFB23903.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Colombia]
 gi|376328011|gb|AFB25249.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Arizona]
 gi|376330691|gb|AFB27927.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Hino]
 gi|376333355|gb|AFB30588.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Rickettsia
           rickettsii str. Hauke]
          Length = 289

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/285 (36%), Positives = 146/285 (51%), Gaps = 46/285 (16%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHF------------- 149
           SS+   EL KF  I+  WW+ +G +  LH +NP RL +I   +  H+             
Sbjct: 2   SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREEF 61

Query: 150 --------------RKDPYS----ARPFE-----------GLNIVDVGCGGGILSEPLAR 180
                         R+D  S      P E            L I+DVGCGGG+++ PLA 
Sbjct: 62  VGNMQHSTAAYALVREDASSRLIHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAA 121

Query: 181 MGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRKFDAVIASEVIEHV 240
            G  VT IDA++ NI+ A  +A  +     I Y  +T E+L  + + +D VI  EVIEHV
Sbjct: 122 QGFNVTAIDALQSNIETATAYAKANG--VKINYLQSTIEELASD-KLYDVVICLEVIEHV 178

Query: 241 ADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLPKGTHQWSSFLTPE 300
           A+  +F  +L       G  +ISTINR+ +AY   II AE+IL W+PK TH +S FL P 
Sbjct: 179 ANVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPL 238

Query: 301 ELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVN-FIAFGTK 344
           E+  +L    I+++E+ G VY+     W LSDDI VN F+  G+K
Sbjct: 239 EIYEMLTDTKIEIQELKGLVYDLAKNEWKLSDDIDVNYFMCLGSK 283


>gi|71276239|ref|ZP_00652518.1| Ubiquinone biosynthesis O-methyltransferase [Xylella fastidiosa
           Dixon]
 gi|170730737|ref|YP_001776170.1| 3-demethylubiquinone-9 3-methyltransferase [Xylella fastidiosa M12]
 gi|226725572|sp|B0U3W1.1|UBIG_XYLFM RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|71163000|gb|EAO12723.1| Ubiquinone biosynthesis O-methyltransferase [Xylella fastidiosa
           Dixon]
 gi|71729243|gb|EAO31362.1| Ubiquinone biosynthesis O-methyltransferase [Xylella fastidiosa
           Ann-1]
 gi|167965530|gb|ACA12540.1| 3-demethylubiquinone-9 3-O-methyltransferase [Xylella fastidiosa
           M12]
          Length = 246

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 134/236 (56%), Gaps = 15/236 (6%)

Query: 106 KHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIV 165
           + +EL KF+A    WWD  GP KPLHALNP RL +I   +               G  ++
Sbjct: 13  RQSELDKFAAFTSGWWDPHGPQKPLHALNPVRLDYISKRVS------------LSGARVL 60

Query: 166 DVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ 225
           DVGCGGG+LSE LAR GA VT ID   + IK ARLH  L+     ++Y     E L+ EQ
Sbjct: 61  DVGCGGGLLSEALARQGAHVTAIDLAPELIKAARLHG-LESGIQ-VDYRIQAIEDLLAEQ 118

Query: 226 -RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILH 284
              FDA+   E++EHV DPA    + + L    G   +STINR++ A+  A++ AE+++ 
Sbjct: 119 PAPFDAIACMEMLEHVPDPAAIVDACAHLLKPGGRLFVSTINRTLAAFMLAVVGAEYVVR 178

Query: 285 WLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIA 340
            LPKGTHQ+  F+ P EL   L+ A + +++++G  Y P   R  L+    +N++A
Sbjct: 179 LLPKGTHQYKDFIRPAELAAWLRHAGLHLEDVSGMRYEPWRNRARLTARTDINYLA 234


>gi|401764516|ref|YP_006579523.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Enterobacter
           cloacae subsp. cloacae ENHKU01]
 gi|400176050|gb|AFP70899.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Enterobacter
           cloacae subsp. cloacae ENHKU01]
          Length = 242

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 140/246 (56%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKSPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+     +EY 
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHA-LESGIQ-VEYV 108

Query: 215 CTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+   +   ++D V   E++EHV DP     + + L    G    STINR+ +A+ 
Sbjct: 109 QETVEEHAAKHAHQYDVVTCMEMLEHVPDPQSVVNACAKLVKPGGQVFFSTINRNGKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE++L  +PKGTH    F+ P EL+  + R  +  + + G  YNPLT ++ L+  
Sbjct: 169 MAVVGAEYVLRMVPKGTHDVKKFIKPAELLSWVDRTWLKEQHITGLHYNPLTDKFKLAPG 228

Query: 334 ISVNFI 339
           + VN++
Sbjct: 229 VDVNYM 234


>gi|343493788|ref|ZP_08732083.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio
           nigripulchritudo ATCC 27043]
 gi|342825767|gb|EGU60233.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Vibrio
           nigripulchritudo ATCC 27043]
          Length = 235

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 134/238 (56%), Gaps = 12/238 (5%)

Query: 108 AELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDV 167
           AE+ KF  +A  WWD EG +KPLH +NP RL ++       F           G  ++DV
Sbjct: 10  AEIKKFEDMASRWWDLEGEFKPLHQINPLRLNYVLDKCEGLF-----------GKKVLDV 58

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQRK 227
           GCGGGIL+E +A+ GA VTG+D  ++ +++ARLHA L+  T+      T  +   E    
Sbjct: 59  GCGGGILAESMAKEGAVVTGLDMGKEPLEVARLHA-LETGTTLTYVQSTVEDHAAENPGL 117

Query: 228 FDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWLP 287
           +D V   E++EHV DP    +S + L    G    ST+NR++++Y  AI+ AEH+L  +P
Sbjct: 118 YDVVTCMEMLEHVPDPLSVIRSCAELVKPGGKVFFSTLNRNVKSYLFAIVGAEHLLKLVP 177

Query: 288 KGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGTKN 345
           KGTH    F+ P EL+ ++    +  + + G  YNPL  R+SL  ++ VN+I   T+ 
Sbjct: 178 KGTHDHDKFIRPAELLKMIDTTDLYEESITGLQYNPLNDRYSLGTNVDVNYIVHTTRQ 235


>gi|325267200|ref|ZP_08133866.1| 3-demethylubiquinone-9 3-O-methyltransferase [Kingella
           denitrificans ATCC 33394]
 gi|324981333|gb|EGC16979.1| 3-demethylubiquinone-9 3-O-methyltransferase [Kingella
           denitrificans ATCC 33394]
          Length = 237

 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 131/233 (56%), Gaps = 15/233 (6%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVDVG 168
           E+ KFS +A  WWD  G +KPLH +NP RL +I                   G  +VDVG
Sbjct: 11  EIEKFSRLAAKWWDKYGEFKPLHDINPLRLDYIDRN------------AQLAGKTVVDVG 58

Query: 169 CGGGILSEPLARMGA-TVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ-R 226
           CGGGILSE +A  GA +V G+D  E +++ A  HA        ++Y C + E L  E   
Sbjct: 59  CGGGILSESMALRGAESVLGVDMAELSLQTAAAHAQTH-GVDNVQYRCISVEDLAAEMPH 117

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
            FD V   E++EHV DPA   ++ + L   +G    STINR+  +Y  AI+ AE+IL+ +
Sbjct: 118 SFDIVSCMEMLEHVPDPASVIRACAKLAKPDGWVFFSTINRNATSYLHAILGAEYILNLV 177

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           PKGTH W  F+TP EL  + ++A +D+ +  G  YNPLT  + L D + VN++
Sbjct: 178 PKGTHTWQKFITPAELARMARQAGLDITDTQGMGYNPLTRNYFLGDKVDVNYL 230


>gi|440231687|ref|YP_007345480.1| 3-demethylubiquinone-9 3-methyltransferase [Serratia marcescens
           FGI94]
 gi|440053392|gb|AGB83295.1| 3-demethylubiquinone-9 3-methyltransferase [Serratia marcescens
           FGI94]
          Length = 241

 Score =  177 bits (448), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 136/238 (57%), Gaps = 14/238 (5%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F K           
Sbjct: 10  ANVDHQEIAKFEAVASRWWDLEGEFKPLHRINPLRLNYIMQRADGIFDK----------- 58

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLV 222
            ++DVGCGGGIL+E +AR GA VTG+D   + +++ARLHA L+    T+ Y   T E   
Sbjct: 59  QVLDVGCGGGILAESMAREGAQVTGLDMGAEPLQVARLHA-LESGV-TVNYIQETVESHA 116

Query: 223 EEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEH 281
           E   + +D V   E++EHV DPA   ++ + L    G    STINR+ +A+  A++ AE+
Sbjct: 117 EAHPQHYDVVTCMEMLEHVPDPASVVRACAQLVKPGGHVFFSTINRNTKAWLMAVVGAEY 176

Query: 282 ILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           IL  +P+GTH    F+ P EL+  +    +  K M G  YNP+T  + L  ++ VN++
Sbjct: 177 ILKMVPQGTHDHKKFIRPSELIRWVDSTPLREKHMIGLHYNPITDHFKLGRNVDVNYM 234


>gi|421856571|ref|ZP_16288935.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           radioresistens DSM 6976 = NBRC 102413]
 gi|403188011|dbj|GAB75136.1| 3-demethylubiquinone-9 3-methyltransferase [Acinetobacter
           radioresistens DSM 6976 = NBRC 102413]
          Length = 239

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/241 (40%), Positives = 137/241 (56%), Gaps = 20/241 (8%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL---NIV 165
           E+AKF A+A  WWD    ++PLH +NP RL ++          D  S     GL    ++
Sbjct: 10  EIAKFEALAAKWWDQHSEFRPLHQINPLRLNWV----------DELSG----GLASKKVL 55

Query: 166 DVGCGGGILSEPLARMGAT-VTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEE 224
           DVGCGGGIL+E +AR GA  V G+D  E  + + RLHA  +     IEY     E+L EE
Sbjct: 56  DVGCGGGILTESMARRGAAEVLGVDMGEAPLAVGRLHAQQE-NVQNIEYRQIPVEQLAEE 114

Query: 225 QR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHIL 283
           Q  ++D V   E++EHV DPA   K+   L    G    STINR+ ++Y  AII AE++L
Sbjct: 115 QAGQYDIVTCMEMLEHVPDPASIIKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYLL 174

Query: 284 HWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFIAFGT 343
             LPKGTH +  F+ P EL   ++ A +++K+M G  YNPLT  + L+ ++ VN++    
Sbjct: 175 RMLPKGTHDYHKFIRPSELAHDIRAAGLELKQMTGLHYNPLTKHYWLAPNVDVNYMVHTV 234

Query: 344 K 344
           K
Sbjct: 235 K 235


>gi|71906866|ref|YP_284453.1| 3-demethylubiquinone-9 3-methyltransferase [Dechloromonas aromatica
           RCB]
 gi|109895670|sp|Q47GP8.1|UBIG_DECAR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|71846487|gb|AAZ45983.1| 3-demethylubiquinone-9 3-methyltransferase [Dechloromonas aromatica
           RCB]
          Length = 232

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 137/234 (58%), Gaps = 15/234 (6%)

Query: 107 HAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGLNIVD 166
            AEL KF  +A  WWD    +KPLH +NP R+ +I   +               G  ++D
Sbjct: 6   QAELDKFGELAHRWWDPNSEFKPLHDINPLRIDWIDQAIS------------LAGKRVLD 53

Query: 167 VGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQ- 225
           VGCGGG+LSE +A  GA VTGID  EK + +A+LH  L      ++Y   + E+L E+  
Sbjct: 54  VGCGGGLLSEGMAVRGANVTGIDLSEKPLGVAKLH--LLETGQKVDYRKISVEELAEQMP 111

Query: 226 RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHW 285
            +FDAV   E++EHV +P+    + + L    G   +ST+NR+ ++Y  A+I AE++L  
Sbjct: 112 GEFDAVTCLEMLEHVPNPSSVITACARLVKPGGQVFLSTLNRNPKSYLFAVIGAEYVLQM 171

Query: 286 LPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           LPKGTH ++ F+ P EL    + A+++ +E+ G  YNPLT ++SL  D SVN++
Sbjct: 172 LPKGTHDYARFIKPSELARWAKMANLEPEELVGMSYNPLTKKYSLGKDTSVNYL 225


>gi|390166635|ref|ZP_10218894.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sphingobium
           indicum B90A]
 gi|389590539|gb|EIM68528.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Sphingobium
           indicum B90A]
          Length = 245

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/241 (40%), Positives = 141/241 (58%), Gaps = 6/241 (2%)

Query: 99  HSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARP 158
           ++A S++   E A F  +A  WWD +G    LH LNP RL +IR  + RH+     S RP
Sbjct: 3   NTASSTIDPREAAHFGGMAADWWDPKGSSAMLHKLNPVRLRYIRDAIDRHWPGLDRSFRP 62

Query: 159 FEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTA 218
             G   +DVGCG G+LSEPLARMGA +T +DA ++NI +AR HA    +   I+Y  T  
Sbjct: 63  LAGRRALDVGCGAGLLSEPLARMGAALTALDAAKENIAVARSHA--AGQGLAIDYRATPV 120

Query: 219 EKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           E+L  E+  FD V + EVIEHVADPA F  +L+      G  ++ST NR+  +    I  
Sbjct: 121 EQL--EESGFDLVTSMEVIEHVADPAAFVAALAEKLAPGGLLILSTPNRTPLSRLAMITI 178

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
            E +   +PKGTH W  F+ PEEL  +L+ A ++V + AG  + P  G + LS + ++++
Sbjct: 179 GESV-GGIPKGTHDWHKFINPEELTKLLEDAGLEVIDSAGISFTPGRG-FILSPNQAIDY 236

Query: 339 I 339
           +
Sbjct: 237 L 237


>gi|206575715|ref|YP_002237363.1| 3-demethylubiquinone-9 3-methyltransferase [Klebsiella pneumoniae
           342]
 gi|290508494|ref|ZP_06547865.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella sp.
           1_1_55]
 gi|226725551|sp|B5XNZ3.1|UBIG_KLEP3 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=2-polyprenyl-6-hydroxyphenyl methylase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|206564773|gb|ACI06549.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella pneumoniae
           342]
 gi|289777888|gb|EFD85885.1| 3-demethylubiquinone-9 3-O-methyltransferase [Klebsiella sp.
           1_1_55]
          Length = 242

 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 139/245 (56%), Gaps = 12/245 (4%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K S   ++ HAE+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKTSVAPNVDHAEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++A+LHA L+         
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGAEPLQVAKLHA-LESGIQVDYVQ 109

Query: 215 CTTAEKLVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYAT 274
            T  E   +  +++D V   E++EHV DP     + + L    G    STINR+ +A+  
Sbjct: 110 ETVEEHAAKHPQQYDVVTCMEMLEHVPDPQSVVHACARLVKPGGQVFFSTINRNGKAWLM 169

Query: 275 AIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDI 334
           A++ AE+++  +PKGTH    F+ P EL+  + + ++  + + G  YNPLT  + L+  +
Sbjct: 170 AVVGAEYVMKMVPKGTHDVKKFIKPAELLSWVDQTTLKEQHIIGLHYNPLTNTFKLAPGV 229

Query: 335 SVNFI 339
            VN++
Sbjct: 230 DVNYM 234


>gi|291085105|ref|ZP_06352070.2| 3-demethylubiquinone-9 3-O-methyltransferase [Citrobacter youngae
           ATCC 29220]
 gi|291071976|gb|EFE10085.1| 3-demethylubiquinone-9 3-O-methyltransferase [Citrobacter youngae
           ATCC 29220]
          Length = 270

 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 139/246 (56%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 30  NAEKPPVTHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYITERSGGLF----- 84

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++A+LHA L+     +EY 
Sbjct: 85  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGSEPLQVAKLHA-LESGIQ-VEYV 136

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+  E+   ++D V   E++EHV DP     + + L    G    ST+NR+ +++ 
Sbjct: 137 QETVEEHAEKHAHQYDVVTCMEMLEHVPDPQSVVSACARLVKPGGEVFFSTLNRNGKSWL 196

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+IL  +PKGTH    F+ P EL+  + +  +  + M G  YNPLT  + L   
Sbjct: 197 MAVVGAEYILRMVPKGTHDVKKFIKPAELLQWVDQTVLKERHMTGLHYNPLTNSFKLGPG 256

Query: 334 ISVNFI 339
           + VN++
Sbjct: 257 VDVNYM 262


>gi|253989037|ref|YP_003040393.1| 3-demethylubiquinone-9 3-methyltransferase [Photorhabdus
           asymbiotica]
 gi|253780487|emb|CAQ83649.1| 3-demethylubiquinone-9 3-methyltransferase [Photorhabdus
           asymbiotica]
          Length = 240

 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/247 (38%), Positives = 140/247 (56%), Gaps = 16/247 (6%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N K  S  +++   E+ KF A+A  WWD EG ++PLH +NP RL +I             
Sbjct: 2   NTKTPSTTNNVDQQEIEKFEAVASRWWDLEGEFQPLHRINPLRLNYILQ----------- 50

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETST-IEY 213
            +    G  I+DVGCGGGILSE LAR GA VTG+D   + +++ARLHA    ET   + Y
Sbjct: 51  RSEGIFGKKILDVGCGGGILSESLAREGAEVTGLDMGTEPLQVARLHA---LETGIPVTY 107

Query: 214 CCTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAY 272
              T E   E+  + +D V   E++EHV DP    ++ + L    G    STINR+ +A+
Sbjct: 108 VQETVESHAEKYPQAYDIVTCMEMLEHVPDPESVVRACAQLVKPGGHVFFSTINRNKKAW 167

Query: 273 ATAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD 332
             A+I AE+IL+ +PKGTH    F+ P EL+  + R  +  + + G  YNPLT ++SL  
Sbjct: 168 FMAVIGAEYILNMVPKGTHDAKKFIRPSELIGWIDRTPLKERHIIGLHYNPLTDKFSLGY 227

Query: 333 DISVNFI 339
           ++ VN++
Sbjct: 228 NVDVNYM 234


>gi|257454759|ref|ZP_05620013.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enhydrobacter
           aerosaccus SK60]
 gi|257447879|gb|EEV22868.1| 3-demethylubiquinone-9 3-O-methyltransferase [Enhydrobacter
           aerosaccus SK60]
          Length = 244

 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 133/233 (57%), Gaps = 11/233 (4%)

Query: 109 ELAKFSAIADTWWDAEGPYKPLHALNPTRLAFI-RSTLCRHFRKDPYSARPFEGLNIVDV 167
           E+ KF+ +A+ WWD  G +  LH +NP RL +I + T+ R             G  ++DV
Sbjct: 14  EVQKFTDLANEWWDKSGAFATLHQINPLRLNWIEQQTIARQ-------QSGLTGKKVLDV 66

Query: 168 GCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAEKLVEEQR- 226
           GCGGGILS  +A  GATVTGID  E NIK A++HA+    +  I++ C   E   +    
Sbjct: 67  GCGGGILSHSMAVRGATVTGIDLGEANIKAAQIHAE--QTSQAIDFACVAVEDFAKAHAG 124

Query: 227 KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIAAEHILHWL 286
           +FD V   E++EHV DP     +   L    G  V+STINR+ ++Y  A+I AE++L  L
Sbjct: 125 EFDVVTCMEMLEHVPDPQSIINACFTLLKPNGVLVLSTINRNPKSYLFAVIGAEYLLRLL 184

Query: 287 PKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNFI 339
           P+GTH +  F+TP EL    QRA    +++ G  YNPL   + L+ ++ VN++
Sbjct: 185 PRGTHDYEKFITPAELDRFAQRAGCKRQDLIGLHYNPLIKHYWLAQNVDVNYM 237


>gi|365850442|ref|ZP_09390905.1| 3-demethylubiquinone-9 3-O-methyltransferase [Yokenella
           regensburgei ATCC 43003]
 gi|364567108|gb|EHM44780.1| 3-demethylubiquinone-9 3-O-methyltransferase [Yokenella
           regensburgei ATCC 43003]
          Length = 251

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 140/246 (56%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K S   ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 11  NAEKSSVIHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLF----- 65

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+     +EY 
Sbjct: 66  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHA-LESGIE-VEYI 117

Query: 215 CTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+   +  +++D V   E++EHV DP    ++ + L    G    STINR+ +A+ 
Sbjct: 118 QKTVEEHAAQNPQQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGHVFFSTINRNGKAWL 177

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+++  +PKGTH    F+ P EL+  +    +  K M G  +NPL   + L+  
Sbjct: 178 MAVVGAEYVMRMVPKGTHDVKKFIKPAELLSWVDNTCLQEKHMTGLHFNPLLNSFKLAPG 237

Query: 334 ISVNFI 339
           + VN++
Sbjct: 238 VDVNYM 243


>gi|365108474|ref|ZP_09336333.1| 3-demethylubiquinone-9 3-methyltransferase [Citrobacter freundii
           4_7_47CFAA]
 gi|363640368|gb|EHL79839.1| 3-demethylubiquinone-9 3-methyltransferase [Citrobacter freundii
           4_7_47CFAA]
          Length = 242

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 141/250 (56%), Gaps = 14/250 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKPPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYITERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++A+LHA L+     +EY 
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHA-LESGIQ-VEYV 108

Query: 215 CTTAEKLVEEQ-RKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+  E+   ++D V   E++EHV DP    ++ S L    G    ST+NR+ +++ 
Sbjct: 109 QETVEEHAEKHAHQYDVVTCMEMLEHVPDPQSVVRACSRLVKPGGEVFFSTLNRNGKSWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE+IL  +PKGTH    F+ P EL+  + +  +  + M G  YNP+T  + L   
Sbjct: 169 MAVVGAEYILRMVPKGTHDVKKFIKPAELLEWVDQTVLKERHMTGLHYNPITNTFKLGPG 228

Query: 334 ISVNFIAFGT 343
           + VN++   T
Sbjct: 229 VDVNYMVHTT 238


>gi|256822115|ref|YP_003146078.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis
           DSM 16069]
 gi|256795654|gb|ACV26310.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis
           DSM 16069]
          Length = 239

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 140/242 (57%), Gaps = 20/242 (8%)

Query: 103 SSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPFEGL 162
           +++   E+ KF  +A  WWD EG +KPLH +NP RL FI             +A   +G 
Sbjct: 9   ANVDQHEINKFEQMASRWWDKEGDFKPLHDINPLRLQFILD-----------NANGLQGK 57

Query: 163 NIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLH---ADLDPETSTIEYCCTTAE 219
            ++D+GCGGGIL+E +A+ GA  TGID  +  +++A+LH   + LD     I+Y   TAE
Sbjct: 58  KVLDIGCGGGILTEAMAKEGAQATGIDMGDMPLEVAKLHMLESGLD-----IDYQKITAE 112

Query: 220 KLVEEQR-KFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           +  E+   +FD V   E++EHV DP+   K+   L   +G    STINR+ +++  AI+ 
Sbjct: 113 EFAEQHAGQFDVVTCLEMLEHVPDPSSIIKACRKLVKPDGHVFFSTINRNPKSFLFAIVG 172

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDDISVNF 338
           AE++L  LPKGTH +  F+ P EL    + A +  + + G  YNPLT ++ LS ++ VN+
Sbjct: 173 AEYLLQMLPKGTHDFKKFIRPSELEAWSRPAGLPFQSIIGMHYNPLTKKYWLSHNVDVNY 232

Query: 339 IA 340
           + 
Sbjct: 233 LV 234


>gi|419958243|ref|ZP_14474308.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Enterobacter
           cloacae subsp. cloacae GS1]
 gi|388606926|gb|EIM36131.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/
           2-octaprenyl-6-hydroxy phenol methylase [Enterobacter
           cloacae subsp. cloacae GS1]
          Length = 242

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 140/246 (56%), Gaps = 14/246 (5%)

Query: 95  NNKKHSAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPY 154
           N +K     ++ H E+AKF A+A  WWD EG +KPLH +NP RL +I       F     
Sbjct: 2   NAEKSPVAHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERSGGLF----- 56

Query: 155 SARPFEGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYC 214
                 G  ++DVGCGGGIL+E +AR GATVTG+D   + +++ARLHA L+     +EY 
Sbjct: 57  ------GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVARLHA-LESGIQ-VEYV 108

Query: 215 CTTAEK-LVEEQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYA 273
             T E+   +   ++D V   E++EHV DP     + + L    G    STINR+ +A+ 
Sbjct: 109 QETVEEHAAKHAHQYDVVTCMEMLEHVPDPQSVVSACANLVKPGGQVFFSTINRNGKAWL 168

Query: 274 TAIIAAEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSDD 333
            A++ AE++L  +PKGTH    F+ P EL+  + +  +  + M G  YNPLT ++ L+  
Sbjct: 169 MAVVGAEYVLRMVPKGTHDVKKFIKPAELLGWVDQTWLKEQHMTGLHYNPLTDKFKLAPG 228

Query: 334 ISVNFI 339
           + VN++
Sbjct: 229 VDVNYM 234


>gi|262274469|ref|ZP_06052280.1| 3-demethylubiquinone-9 3-methyltransferase [Grimontia hollisae CIP
           101886]
 gi|262221032|gb|EEY72346.1| 3-demethylubiquinone-9 3-methyltransferase [Grimontia hollisae CIP
           101886]
          Length = 237

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 143/243 (58%), Gaps = 15/243 (6%)

Query: 100 SAPSSLKHAELAKFSAIADTWWDAEGPYKPLHALNPTRLAFIRSTLCRHFRKDPYSARPF 159
           + P ++  AE+ KF  +A  WWD EG +KPLH +NP RL +I       F          
Sbjct: 2   TTPLNVDPAEIQKFEDVASRWWDLEGEFKPLHQINPLRLNYIIERSLGIF---------- 51

Query: 160 EGLNIVDVGCGGGILSEPLARMGATVTGIDAVEKNIKIARLHADLDPETSTIEYCCTTAE 219
            G  I+DVGCGGGIL+E +AR GA VTG+D  ++ + +ARLHA L+  T T+ Y  +TAE
Sbjct: 52  -GKKILDVGCGGGILAESMAREGAEVTGLDMGKEPLTVARLHA-LETGT-TVSYVQSTAE 108

Query: 220 KLVE-EQRKFDAVIASEVIEHVADPAEFCKSLSALTVSEGATVISTINRSMRAYATAIIA 278
           +  +  Q  +D V   E++EHV DPA    S + +    G    ST+NR+ +++  AI+ 
Sbjct: 109 EHADTHQGYYDIVTCMEMLEHVPDPASVIASCAKMVKPGGHVFFSTLNRNTKSWLFAIVG 168

Query: 279 AEHILHWLPKGTHQWSSFLTPEELVLILQRASIDVKEMAGFVYNPLTGRWSLSD-DISVN 337
           AEH++  +PKGTH  + F+ P EL+ ++    +  + M G  YNPLTG++ LS  ++ VN
Sbjct: 169 AEHLMKIVPKGTHDHNKFIRPSELLKMIDSTPLREQHMTGLHYNPLTGQYWLSPRNVDVN 228

Query: 338 FIA 340
           +I 
Sbjct: 229 YIV 231


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.129    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,152,547,522
Number of Sequences: 23463169
Number of extensions: 199864131
Number of successful extensions: 820375
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 4889
Number of HSP's that attempted gapping in prelim test: 811632
Number of HSP's gapped (non-prelim): 7787
length of query: 346
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 203
effective length of database: 9,003,962,200
effective search space: 1827804326600
effective search space used: 1827804326600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)